+E Replication protein KO
#
DNA Replication Proteins - Mollisia scopiformis
%
!
AEukaryotic type
B DNA Replication Initiation Factors
C pre-RC (pre-replication complex)
D LY89DRAFT_695194 P-loop containing nucleoside triphosphate hydrolase protein K02603 ORC1; origin recognition complex subunit 1
D LY89DRAFT_625151 ORC2-domain-containing protein K02604 ORC2; origin recognition complex subunit 2
D LY89DRAFT_572219 uncharacterized protein K02605 ORC3; origin recognition complex subunit 3
D LY89DRAFT_596455 P-loop containing nucleoside triphosphate hydrolase protein K02606 ORC4; origin recognition complex subunit 4
D LY89DRAFT_628822 uncharacterized protein K02607 ORC5; origin recognition complex subunit 5
D LY89DRAFT_776790 uncharacterized protein K02608 ORC6; origin recognition complex subunit 6
D LY89DRAFT_295182 cell division control protein Cdc6 K02213 CDC6; cell division control protein 6
D LY89DRAFT_614558 MCM-domain-containing protein K02540 MCM2; DNA replication licensing factor MCM2 [EC:5.6.2.3]
D LY89DRAFT_707431 putative DNA replication licensing factor mcm3 K02541 MCM3; DNA replication licensing factor MCM3 [EC:5.6.2.3]
D LY89DRAFT_780734 MCM-domain-containing protein K02212 MCM4; DNA replication licensing factor MCM4 [EC:5.6.2.3]
D LY89DRAFT_615251 MCM-domain-containing protein K02209 MCM5; DNA replication licensing factor MCM5 [EC:5.6.2.3]
D LY89DRAFT_661134 MCM-domain-containing protein K02542 MCM6; DNA replication licensing factor MCM6 [EC:5.6.2.3]
D LY89DRAFT_636894 DNA replication licensing factor MCM7 K02210 MCM7; DNA replication licensing factor MCM7 [EC:5.6.2.3]
C CDK (cyclin dependent kinase)
C DDK (Dbf-4 dependent kinase)
D LY89DRAFT_124090 kinase-like protein K02214 CDC7; cell division control protein 7 [EC:2.7.11.1]
D LY89DRAFT_663481 uncharacterized protein K02309 DBF4; regulatory subunit for Cdc7p protein kinase
C GINS complex
D LY89DRAFT_442154 GINS complex, Psf1 component K10732 GINS1; GINS complex subunit 1
D LY89DRAFT_689698 GINS complex, PSF2 component K10733 GINS2; GINS complex subunit 2
D LY89DRAFT_587957 DNA replication complex GINS protein psf3 K10734 GINS3; GINS complex subunit 3
D LY89DRAFT_582436 GINS complex, Sld5 component K10735 GINS4; GINS complex subunit 4
C Other initiation factors
D LY89DRAFT_715108 uncharacterized protein K03507 DPB11; DNA replication regulator DPB11
D LY89DRAFT_442789 uncharacterized protein K10731 SLD3; DNA replication regulator SLD3
D LY89DRAFT_616940 CDC45-like protein K06628 CDC45; cell division control protein 45
D LY89DRAFT_682207 uncharacterized protein K10736 MCM10; minichromosome maintenance protein 10
B DNA Replication Elongation Factors
C DNA polymerase alpha / primase complex
D LY89DRAFT_466982 uncharacterized protein K02320 POLA1; DNA polymerase alpha subunit A [EC:2.7.7.7]
D LY89DRAFT_778138 DNA polymerase alpha/epsilon subunit B K02321 POLA2; DNA polymerase alpha subunit B
D LY89DRAFT_689326 prim-pol domain-containing protein K02684 PRI1; DNA primase small subunit [EC:2.7.7.102]
D LY89DRAFT_253232 DNA primase, large subunit K02685 PRI2; DNA primase large subunit
C DNA polymerase epsilon complex
D LY89DRAFT_787183 DUF1744-domain-containing protein K02324 POLE; DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
D LY89DRAFT_782999 uncharacterized protein K02325 POLE2; DNA polymerase epsilon subunit 2 [EC:2.7.7.7]
D LY89DRAFT_610518 histone-fold-containing protein K02326 POLE3; DNA polymerase epsilon subunit 3 [EC:2.7.7.7]
C DNA polymerase delta complex
D LY89DRAFT_740574 uncharacterized protein K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
D LY89DRAFT_619491 DNA polymerase-like protein subunit delta-2 K02328 POLD2; DNA polymerase delta subunit 2
D LY89DRAFT_790120 uncharacterized protein K03504 POLD3; DNA polymerase delta subunit 3
D LY89DRAFT_679938 uncharacterized protein K03505 POLD4; DNA polymerase delta subunit 4
C DNA polymerase gamma complex (mitochondrial)
D LY89DRAFT_710818 DNA polymerase-like protein gamma K02332 POLG; DNA polymerase gamma 1 [EC:2.7.7.7]
C RPA (replication protein A)
D LY89DRAFT_688416 replication factor-a protein K07466 RFA1; replication factor A1
D LY89DRAFT_782492 replication protein A, subunit RPA32 K10739 RFA2; replication factor A2
D LY89DRAFT_391103 replication factor A protein 3 K10740 RPA3; replication factor A3
C RFC (replication factor C)
D LY89DRAFT_684333 DNA replication factor C, large subunit K10754 RFC1; replication factor C subunit 1
D LY89DRAFT_611996 P-loop containing nucleoside triphosphate hydrolase protein K10755 RFC2_4; replication factor C subunit 2/4
D LY89DRAFT_679259 P-loop containing nucleoside triphosphate hydrolase protein K10755 RFC2_4; replication factor C subunit 2/4
D LY89DRAFT_721343 P-loop containing nucleoside triphosphate hydrolase protein K10756 RFC3_5; replication factor C subunit 3/5
D LY89DRAFT_788408 P-loop containing nucleoside triphosphate hydrolase protein K10756 RFC3_5; replication factor C subunit 3/5
C RNase H
D LY89DRAFT_588421 ribonuclease H-like protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D LY89DRAFT_658090 uncharacterized protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D LY89DRAFT_658167 uncharacterized protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D LY89DRAFT_691495 ribonuclease H-like protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D LY89DRAFT_716089 ribonuclease H-like protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D LY89DRAFT_786907 ribonuclease H-like protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D LY89DRAFT_788521 ribonuclease H-like protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D LY89DRAFT_691028 putative ribonuclease H2 subunit A K10743 RNASEH2A; ribonuclease H2 subunit A [EC:3.1.26.4]
D LY89DRAFT_692056 ribonuclease H1 small subunit K10745 RNASEH2C; ribonuclease H2 subunit C
C Other elongation factors
D LY89DRAFT_607274 proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen
D LY89DRAFT_728600 P-loop containing nucleoside triphosphate hydrolase protein K19783 HCS1; DNA polymerase alpha-associated DNA helicase A [EC:5.6.2.3]
D LY89DRAFT_686547 flap endonuclease-like protein 1 K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
D LY89DRAFT_619648 uncharacterized protein K10746 EXO1; exonuclease 1 [EC:3.1.-.-]
D LY89DRAFT_493340 DNA ligase K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
D LY89DRAFT_575935 P-loop containing nucleoside triphosphate hydrolase protein K26118 ATAD5; ATPase family AAA domain-containing protein 5
B DNA Replication Termination Factors
C DNA methylation enzymes
D LY89DRAFT_185769 S-adenosyl-L-methionine-dependent methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D LY89DRAFT_377887 S-adenosyl-L-methionine-dependent methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D LY89DRAFT_589436 S-adenosyl-L-methionine-dependent methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
C Prevention of re-replication factors
C Telomere proteins
D Shelterin complex
E LY89DRAFT_787664 uncharacterized protein K11109 POT1; protection of telomeres protein 1
D TERB1-TERB2-MAJIN complex
D CST complex (animals)
D CST complex (yeast)
D RIF proteins
D SIR proteins
C Telomerase complex (animals)
D Dyskerin complex
E LY89DRAFT_595585 Gar1-domain-containing protein K11128 GAR1; H/ACA ribonucleoprotein complex subunit 1
E LY89DRAFT_709169 L30e-like protein K11129 NHP2; H/ACA ribonucleoprotein complex subunit 2
E LY89DRAFT_684577 H/ACA ribonucleoprotein complex subunit 3 K11130 NOP10; H/ACA ribonucleoprotein complex subunit 3
E LY89DRAFT_731197 putative rRNA pseudouridine synthase K11131 DKC1; H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-]
C Telomerase complex (fungi)
D Sm core complex
E LY89DRAFT_293527 putative small nuclear ribonucleoprotein-associated protein B K11086 SNRPB; small nuclear ribonucleoprotein B and B'
E LY89DRAFT_679332 Sm-like ribonucleoprotein K11087 SNRPD1; small nuclear ribonucleoprotein D1
E LY89DRAFT_681350 small nuclear ribonucleoprotein Sm D2 K11096 SNRPD2; small nuclear ribonucleoprotein D2
E LY89DRAFT_681292 Sm-like ribonucleoprotein K11088 SNRPD3; small nuclear ribonucleoprotein D3
E LY89DRAFT_539226 Sm-like ribonucleoprotein K11097 SNRPE; small nuclear ribonucleoprotein E
E LY89DRAFT_633970 putative small nuclear ribonucleoprotein G K11099 SNRPG; small nuclear ribonucleoprotein G
C ELG1-RFC complex
D LY89DRAFT_611996 P-loop containing nucleoside triphosphate hydrolase protein K10755 RFC2_4; replication factor C subunit 2/4
D LY89DRAFT_679259 P-loop containing nucleoside triphosphate hydrolase protein K10755 RFC2_4; replication factor C subunit 2/4
D LY89DRAFT_721343 P-loop containing nucleoside triphosphate hydrolase protein K10756 RFC3_5; replication factor C subunit 3/5
D LY89DRAFT_788408 P-loop containing nucleoside triphosphate hydrolase protein K10756 RFC3_5; replication factor C subunit 3/5
C MRN complex
D LY89DRAFT_605531 DNA repair exonuclease K10865 MRE11; double-strand break repair protein MRE11
D LY89DRAFT_706435 uncharacterized protein K10867 NBN; nibrin
C Other termination factors
D LY89DRAFT_266352 phosphatidylinositol 3 K04728 ATM; serine-protein kinase ATM [EC:2.7.11.1]
D LY89DRAFT_607616 uncharacterized protein K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
D LY89DRAFT_777280 DNA repair protein K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-]
D LY89DRAFT_707348 PARP-domain-containing protein K28005 PARP2; poly [ADP-ribose] polymerase 2 [EC:2.4.2.30]
D LY89DRAFT_664584 uncharacterized protein K11135 PINX1; Pin2-interacting protein X1
D LY89DRAFT_292418 uncharacterized protein K11137 TELO2; telomere length regulation protein
D LY89DRAFT_669779 uncharacterized protein K23314 WRAP53; telomerase Cajal body protein 1
D LY89DRAFT_684185 uncharacterized protein K25059 SDE2; replication stress response regulator SDE2
D LY89DRAFT_682427 DUF602-domain-containing protein K25186 RTF2; replication termination factor 2
D LY89DRAFT_776768 uncharacterized protein K22485 TBF1; protein TBF1
D LY89DRAFT_739612 RNA-binding domain-containing protein K28506 GBP2; serine/arginine (SR)-type shuttling mRNA binding protein
D LY89DRAFT_784495 RNA-binding domain-containing protein K28514 TCG1; single-stranded TG1-3 DNA-binding protein
B DNA Topoisomerases
C LY89DRAFT_680424 putative DNA topoisomerase 1 K03163 TOP1; DNA topoisomerase I [EC:5.6.2.1]
C LY89DRAFT_782231 putative DNA topoisomerase 2 K03164 TOP2; DNA topoisomerase II [EC:5.6.2.2]
C LY89DRAFT_421355 DNA topoisomerase-like protein III K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
#
AProkaryotic type
B DNA Replication Initiation Factors
C Initiation factors (bacterial)
C Initiation factors (archaeal)
B DNA Replication Elongation Factors
C Elongation factors (bacterial)
D DNA polymerase III holoenzyme
D RNase H
E LY89DRAFT_588421 ribonuclease H-like protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
E LY89DRAFT_658090 uncharacterized protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
E LY89DRAFT_658167 uncharacterized protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
E LY89DRAFT_691495 ribonuclease H-like protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
E LY89DRAFT_716089 ribonuclease H-like protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
E LY89DRAFT_786907 ribonuclease H-like protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
E LY89DRAFT_788521 ribonuclease H-like protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D Other elongation factors
C Elongation factors (archaeal)
D B-family DNA polymerases
D D-family DNA polymerases
D RNase H
E LY89DRAFT_588421 ribonuclease H-like protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
E LY89DRAFT_658090 uncharacterized protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
E LY89DRAFT_658167 uncharacterized protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
E LY89DRAFT_691495 ribonuclease H-like protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
E LY89DRAFT_716089 ribonuclease H-like protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
E LY89DRAFT_786907 ribonuclease H-like protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
E LY89DRAFT_788521 ribonuclease H-like protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D RFC (replication factor C)
D Other elongation factors
E LY89DRAFT_686547 flap endonuclease-like protein 1 K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
E LY89DRAFT_493340 DNA ligase K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
B DNA Replication Termination Factors
C Terminus site-binding protein
C DNA methylation enzymes
C Prevention of re-replication factors
B DNA Topoisomerases
!
#
#[ BRITE | KEGG2 | KEGG ]
#Last updated: August 27, 2025