+E Transcription factors KO
#
Transcription Factors - Pseudomonas sessilinigenes
%
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AEukaryotic type
B Basic leucine zipper (bZIP)
C AP-1(-like) components, Jun
C AP-1(-like) components, Fos
C AP-1(-like) components, Maf
C AP-1(-like) components, NF-E2
C AP-1(-like) components, Fungal regulators
C AP-1(-like) components, CRE-BP/ATF
C CREB
C C/EBP-like factors
C bZIP/PAR
C Plant bZIP factors
C ZIP only
B Basic helix-loop-helix (bHLH)
C Ubiquitous (class A) factors
C Myogenic transcription factors
C Achaete-Scute
C Tal/Twist/Atonal/Hen, Lymphoid factors
C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors
C Tal/Twist/Atonal/Hen, HEN
C Tal/Twist/Atonal/Hen, Mesp
C Tal/Twist/Atonal/Hen, Atonal
C Tal/Twist/Atonal/Hen, Pancreatic factors
C Hairy, Hairy/E(SPL)
C Hairy, Fungal regulators
C Factors with PAS domain
C Yabby
C INO
C HLH domain only
B Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
C Ubiquitous bHLH-ZIP factors
C Cell cycle controlling factors, Myc
C Cell cycle controlling factors, Mad/Max
C Other bHLH-ZIP factors
B Other basic domains
C NF-1
C RF-X
C AP-2 (bHSH)
B Zinc finger
C Cys4 thyroid hormone receptor-like
C Cys4 hepatocyte nuclear factor 4-like
C Cys4 estrogen receptor-like
C Cys4 nerve growth factor IB-like
C Cys4 Fushi tarazu-F1-like
C Cys4 germ cell nuclear factor
C Cys4 Knirps/DAX1-like
C Cys4 GATA-factors
C Cys2His2 SP/KLF family and related proteins
C Cys2His2 GLI-like
C Cys2His2 Snail
C Cys2His2 BTB-ZF factors
C Cys2His2 BED
C Cys2His2 PRDM
C Cys2His2 metabolic regulators in fungi
C Cys2His2 others
C Cys2HisCys zinc factors
C Cys3His zinc factors
C Cys2CysHis zinc factors
C CXXC CpG-binding proteins
D C4K39_1508 C-5 cytosine-specific DNA methylase family protein K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
C Cys6 metabolic regulators in fungi
C Other zinc fingers
B Helix-turn-helix
C Homeo domain ANTP: HOXL
C Homeo domain ANTP: NKL
C Homeo domain Paired-related
C Homeo domain LIM
C Homeo domain POU
C Homeo domain SINE
C Homeo domain ZF
C Homeo domain CUT
C Homeo domain PROS
C Homeo domain TALE
C Homeo domain other
C Fork head/winged helix developmental regulators
C Fork head/winged helix tissue-specific regulators
C Fork head/winged helix cell cycle-controlling factors, E2F
C Fork head/winged helix cell cycle-controlling factors, DP
C Fork head/winged helix other regulators
C Heat shock factors
C Tryptophan clusters Myb, Myb-factors
C Tryptophan clusters Myb, Myb-like factors
C Tryptophan clusters Ets-type
C Tryptophan clusters interferon-regulating factors
C TEA domain
C ARID
B beta-Scaffold factors with minor groove contacts
C RHR (Rel homology region) Rel/Ankyrin
C RHR (Rel homology region) Ankyrin only
C RHR (Rel homology region) NF-AT
C STAT
C p53
C MADS-box regulators of differentiation, MEF-2
C MADS-box regulators of differentiation, Homeotic genes
C MADS-box regulators of differentiation, Yeast regulators
C MADS-box responders to external signals
C SAND domain-containing proteins
C TATA-binding proteins
C HMG SOX
C HMG TCF-1
C HMG2-related
C UBF
C Other HMG box factors
C Heteromeric CCAAT factors
C Grainyhead
C Cold-shock domain factors, DbpA-like
C Cold-shock domain factors, YB-1/DbpB-like
C Cold-shock domain factors, FRG Y2-like
C Runt
C MYRF
B Other transcription factors
C HMGI(Y)
C NUPR
E Line #4
C Pocket domain Rb
C Pocket domain CBP
C T-box
C DMRT
C LRRFIP
C TCP
C AP2/ERF
C WRKY
C LOB
C Copper-fist proteins fungal regulators
C Others
#
AProkaryotic type
B Helix-turn-helix
C AraC family
D C4K39_5337 Transcriptional activator of 4-hydroxyphenylacetate 3-monooxygenase operon, XylS/AraC family K02508 hpaA; AraC family transcriptional regulator, 4-hydroxyphenylacetate 3-monooxygenase operon regulatory protein
D C4K39_2451 Ethanolamine operon regulatory protein K04033 eutR; AraC family transcriptional regulator, ethanolamine operon transcriptional activator
D C4K39_5491 Transcriptional regulator PchR K12243 pchR; AraC family transcriptional regulator, transcriptional activator of the genes for pyochelin and ferripyochelin receptors
D C4K39_2953 Transcriptional regulator, AraC family K14063 feaR; AraC family transcriptional regulator, positive regulator of tynA and feaB
D C4K39_4470 Transcriptional regulator PobR, AraC family K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D C4K39_4807 Transcriptional regulator PobR, AraC family K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D C4K39_2984 Transcriptional regulator, AraC family K18991 mtrA; AraC family transcriptional regulator, activator of mtrCDE
D C4K39_1625 Transcriptional regulator, AraC family K13652 K13652; AraC family transcriptional regulator
D C4K39_3299 Bacterial transcription activator, effector binding protein K13653 K13653; AraC family transcriptional regulator
D C4K39_1014 Transcriptional regulator, AraC family K07506 K07506; AraC family transcriptional regulator
D C4K39_5227 Transcriptional regulator, AraC family K07506 K07506; AraC family transcriptional regulator
D C4K39_5381 Methylphosphotriester-DNA--protein-cysteine S-methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D C4K39_0389 Methylphosphotriester-DNA--protein-cysteine S-methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D C4K39_3246 Methylphosphotriester-DNA--protein-cysteine S-methyltransferase K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D C4K39_3915 Carnitine operon transcriptional regulator K17736 cdhR; AraC family transcriptional regulator, carnitine catabolism transcriptional activator
D C4K39_3358 Arginine pathway regulatory protein ArgR, repressor of arg regulon K21825 argR; AraC family transcriptional regulator, L-arginine-responsive activator
D C4K39_3906 Transcriptional regulator, AraC family K21826 gbdR; AraC family transcriptional regulator, glycine betaine-responsive activator
C LysR family
D C4K39_5470 Transcriptional regulator, LysR family K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D C4K39_0348 Glycine cleavage system transcriptional activator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D C4K39_0609 Glycine cleavage system transcriptional activator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D C4K39_0996 Glycine cleavage system transcriptional activator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D C4K39_1370 Glycine cleavage system transcriptional activator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D C4K39_2304 Glycine cleavage system transcriptional activator GcvA K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D C4K39_2345 Glycine cleavage system transcriptional activator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D C4K39_3079 Glycine cleavage system transcriptional activator GcvA K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D C4K39_3088 Glycine cleavage system transcriptional activator GcvA K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D C4K39_3634 Transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D C4K39_4613 Glycine cleavage system transcriptional activator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D C4K39_4640 transcription regulator protein K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D C4K39_4812 Transcriptional regulator, LysR family K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D C4K39_0587 Transcriptional regulator, LysR family K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D C4K39_2428 Transcriptional regulator, LysR family K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D C4K39_4265 Pca operon transcriptional activator PcaQ K02623 pcaQ; LysR family transcriptional regulator, pca operon transcriptional activator
D C4K39_4736 Transcriptional activator MetR K03576 metR; LysR family transcriptional regulator, regulator for metE and metH
D C4K39_5939 Transcriptional regulator, LysR family K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA
D C4K39_3592 Hydrogen peroxide-inducible genes activator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D C4K39_4802 Transcriptional regulator ArgP, LysR family K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D C4K39_1571 Cyn operon transcriptional activator K11921 cynR; LysR family transcriptional regulator, cyn operon transcriptional activator
D C4K39_3993 transcriptional regulator, MerR family K11921 cynR; LysR family transcriptional regulator, cyn operon transcriptional activator
D C4K39_6186 Cys regulon transcriptional activator CysB K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator
D C4K39_3855 Malonate utilization transcriptional regulator K13928 mdcR; LysR family transcriptional regulator, malonate utilization transcriptional regulator
D C4K39_3024 Transcriptional regulator K14057 abgR; LysR family transcriptional regulator, regulator of abg operon
D C4K39_2228 Transcriptional activator PhbR K17737 dhcR; LysR family transcriptional regulator, carnitine catabolism transcriptional activator
D C4K39_5989 HTH-type transcriptional activator ampR K17850 ampR; LysR family transcriptional regulator, regulator of gene expression of beta-lactamase
D C4K39_1563 Transcriptional regulator, LysR family K18297 mexT; LysR family transcriptional regulator, mexEF-oprN operon transcriptional activator
D C4K39_2934 Transcriptional regulator MexT K18297 mexT; LysR family transcriptional regulator, mexEF-oprN operon transcriptional activator
D C4K39_4444 Transcriptional regulator, LysR family K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC
D C4K39_5183 Transcriptional regulator, LysR family K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC
D C4K39_5793 Transcriptional regulator K19338 nac; LysR family transcriptional regulator, nitrogen assimilation regulatory protein
D C4K39_5572 Transcriptional regulator, LysR family K19618 fitG; LysR family transcriptional regulator, activator of insecticidal toxin
D C4K39_3533 LysR family transcriptional regulator K21645 hypT; LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT
D C4K39_0721 LysR family transcriptional regulator K21699 bauR; LysR family transcriptional regulator, transcriptional activator for bauABCD operon
D C4K39_3771 Transcriptional regulator, LysR family K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
D C4K39_3506 LysR family transcriptional regulator K21711 pycR; LysR family transcriptional regulator, putative pyruvate carboxylase regulator
D C4K39_5817 Aromatic hydrocarbon utilization transcriptional regulator CatR (LysR family) K21757 benM; LysR family transcriptional regulator, benzoate and cis,cis-muconate-responsive activator of ben and cat genes
D C4K39_5061 LysR family transcriptional regulator HdfR K23773 hdfR; LysR family transcriptional regulator, flagellar master operon regulator
D C4K39_0044 Glycine cleavage system transcriptional activator K27042 trpI; LysR family transcriptional regulator, trpBA operon transcriptional activator
C DeoR family
D C4K39_4757 Glycerol-3-phosphate regulon repressor GlpR K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
C LacI family
D C4K39_2150 Ribose operon repressor K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D C4K39_5317 2-ketogluconate utilization repressor PtxS K02525 kdgR; LacI family transcriptional regulator, kdg operon repressor
D C4K39_0854 Fructose repressor FruR, LacI family K03435 fruR1; LacI family transcriptional regulator, fructose operon transcriptional repressor
D C4K39_3294 Gluconate utilization system Gnt-I transcriptional repressor K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
C GntR family
D C4K39_4693 Trehalose operon transcriptional repressor K03486 treR2; GntR family transcriptional regulator, trehalose operon transcriptional repressor
D C4K39_0405 Histidine utilization repressor K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor
D C4K39_1086 putative transcriptional regulator of N-Acetylglucosamine utilization, GntR family K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
D C4K39_1884 Transcriptional regulator, GntR family K03710 K03710; GntR family transcriptional regulator
D C4K39_0811 Lactate-responsive regulator LldR in Enterobacteria, GntR family K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D C4K39_4295 Transcriptional regulator, GntR family K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D C4K39_2341 putative D-glucarate or D-galactorate regulator, GntR family K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D C4K39_5760 Glycolate utilization operon transcriptional activator GlcC K11474 glcC; GntR family transcriptional regulator, glc operon transcriptional activator
D C4K39_5294 Transcriptional regulator, GntR family domain K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D C4K39_0743 putative transcriptional regulator of pyridoxine metabolism K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D C4K39_2510 Transcriptional regulator, GntR family domain K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D C4K39_2598 Transcriptional regulator, GntR family domain K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D C4K39_3514 Transcriptional regulator, GntR family domain K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
C TetR/AcrR family
D C4K39_3899 HTH-type transcriptional regulator BetI K02167 betI; TetR/AcrR family transcriptional regulator, transcriptional repressor of bet genes
D C4K39_1387 Multidrug resistance operon repressor MexR2, AcrR family K03577 acrR; TetR/AcrR family transcriptional regulator, acrAB operon repressor
D C4K39_2921 hypothetical protein K03577 acrR; TetR/AcrR family transcriptional regulator, acrAB operon repressor
D C4K39_0720 Transcriptional regulator, AcrR family K09017 rutR; TetR/AcrR family transcriptional regulator
D C4K39_1775 Transcriptional regulator, AcrR family K09017 rutR; TetR/AcrR family transcriptional regulator
D C4K39_2360 Transcriptional regulator, TetR family K09017 rutR; TetR/AcrR family transcriptional regulator
D C4K39_2472 Transcriptional regulator of pyrimidine catabolism (TetR family) K09017 rutR; TetR/AcrR family transcriptional regulator
D C4K39_3340 Transcriptional regulator, AcrR family K19736 aefR; TetR/AcrR family transcriptional regulator, regulator of autoinduction and epiphytic fitness
D C4K39_6220 Transcriptional regulator, AcrR family K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D C4K39_2990 Transcriptional regulator, AcrR family K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D C4K39_5271 Transcriptional regulator, AcrR family K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D C4K39_6075 Transcriptional regulator, TetR family K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D C4K39_1158 Transcriptional regulator, AcrR family K18301 mexL; TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor
D C4K39_3027 Transcriptional regulator NfxB K18294 nfxB; TetR/AcrR family transcriptional regulator, mexCD-oprJ operon repressor
D C4K39_3062 Transcriptional regulator NfxB K18294 nfxB; TetR/AcrR family transcriptional regulator, mexCD-oprJ operon repressor
D C4K39_3069 Transcriptional regulator NfxB K18294 nfxB; TetR/AcrR family transcriptional regulator, mexCD-oprJ operon repressor
D C4K39_0605 Transcriptional regulator, AcrR family K22105 fabR; TetR/AcrR family transcriptional regulator, fatty acid biosynthesis regulator
D C4K39_6111 Acyclic terpenes utilization regulator AtuR, TetR family K22108 kstR2; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator
C Lrp/AsnC family
D C4K39_5505 Transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D C4K39_5695 Transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D C4K39_2461 Transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D C4K39_3463 Transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D C4K39_3623 Transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D C4K39_4228 Transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D C4K39_4253 Leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D C4K39_5067 Leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D C4K39_5970 Transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D C4K39_3718 Transcriptional regulator, AsnC family K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
C LuxR family
D C4K39_3102 transcriptional regulator, LuxR autoinducer regulated family K18099 rhlR; LuxR family transcriptional regulator, quorum-sensing system regulator RhlR
D C4K39_0797 Transcriptional regulator ahyR/asaR family K07782 sdiA; LuxR family transcriptional regulator, quorum-sensing system regulator SdiA
D C4K39_4597 Two-component transcriptional response regulator, LuxR family K19734 expR; LuxR family transcriptional regulator, quorum-sensing system regulator ExpR
D C4K39_2182 Transcriptional regulator, LuxR family K20330 toxJ; LuxR family transcriptional regulator, activator of tox operons
D C4K39_4957 Transcriptional regulator, LuxR family K20330 toxJ; LuxR family transcriptional regulator, activator of tox operons
D C4K39_4532 HTH-type transcriptional regulator malT K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein
C MarR family
D C4K39_0156 Transcriptional regulator, MarR family K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D C4K39_1647 Transcriptional regulator SlyA K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D C4K39_6164 Organic hydroperoxide resistance transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D C4K39_6180 Organic hydroperoxide resistance transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
C MerR family
D C4K39_0700 Cu(I)-responsive transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D C4K39_0754 Transcriptional regulator, MerR family K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D C4K39_6087 Redox-sensitive transcriptional activator SoxR K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR
D C4K39_0787 Redox-sensitive transcriptional activator SoxR K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR
D C4K39_0971 Transcriptional regulator, MerR family K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator
D C4K39_4499 Transcriptional regulator, MerR family K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator
C Fur family
D C4K39_0817 Ferric uptake regulation protein FUR K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D C4K39_0083 Zinc uptake regulation protein Zur K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
C IclR family
D C4K39_1375 Pca regulon regulatory protein PcaR K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein
C CRP/FNR family
D C4K39_0210 Transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D C4K39_4047 Cyclic AMP receptor protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D C4K39_1584 Cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D C4K39_2010 Fumarate and nitrate reduction regulatory protein K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D C4K39_2880 Nitric oxide -responding transcriptional regulator NnrA (Crp/Fnr family) K21563 dnr; CRP/FNR family transcriptional regulator, dissimilatory nitrate respiration regulator
D C4K39_2892 Nitric oxide -responding transcriptional regulator Dnr (Crp/Fnr family) K21563 dnr; CRP/FNR family transcriptional regulator, dissimilatory nitrate respiration regulator
C Rrf2 family
D C4K39_4661 Iron-sulfur cluster regulator IscR K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
C ArsR family
C XRE family
C PadR family
C Other families
D C4K39_3266 Phosphogluconate repressor HexR, RpiR family K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator
D C4K39_3503 Phosphogluconate repressor HexR, RpiR family K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator
D C4K39_0766 Transcriptional regulator of RpiR family in catabolic operon K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator
D C4K39_4065 Biotin operon repressor K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D C4K39_0657 DNA-binding protein Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D C4K39_3056 hypothetical protein K02688 prpR; transcriptional regulator, propionate catabolism operon regulatory protein
D C4K39_0488 Helix-turn-helix motif K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D C4K39_4459 Helix-turn-helix motif K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D C4K39_1712 Flagellar regulatory protein FleQ K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D C4K39_2493 Transcriptional activator of acetoin dehydrogenase operon AcoR K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D C4K39_4181 Nitrogen regulation protein NtrC K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D C4K39_2885 Anaerobic nitric oxide reductase transcription regulator NorR K12266 norR; anaerobic nitric oxide reductase transcription regulator
D C4K39_4589 Anaerobic nitric oxide reductase transcription regulator NorR K12266 norR; anaerobic nitric oxide reductase transcription regulator
D C4K39_5350 Sugar diacid utilization regulator SdaR K02647 cdaR; carbohydrate diacid regulator
D C4K39_5589 Molybdate-binding domain of ModE K02019 modE; molybdate transport system regulatory protein
D C4K39_3982 DNA-binding domain of ModE K02019 modE; molybdate transport system regulatory protein
D C4K39_1052 YheO-like, PAS domain-containing protein K21829 dauR; D-arginine utilization repressor
D C4K39_5865 hypothetical protein K07726 K07726; putative transcriptional regulator
D C4K39_0226 putative transcriptional regulator YozG, Cro/CI family K07727 K07727; putative transcriptional regulator
D C4K39_5964 Transcriptional regulator K07729 K07729; putative transcriptional regulator
B Ribbon-helix-helix
C CopG family
C Other families
D C4K39_0497 Transcriptional repressor of PutA and PutP K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
B Other transcription factors
C BglG family
C Others
D C4K39_2425 hypothetical protein K23239 frmR; FrmR/RcnR family transcriptional regulator, repressor of frmRAB operon
D C4K39_2439 FrmR: Negative transcriptional regulator of formaldehyde detoxification operon K23239 frmR; FrmR/RcnR family transcriptional regulator, repressor of frmRAB operon
D C4K39_6259 Cell division protein BolA K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D C4K39_3443 Chromosome (plasmid) partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D C4K39_1682 Phenylalanine hydroxylase transcriptional activator PhhR K03721 tyrR; transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport
D C4K39_3239 Transcriptional regulator K03721 tyrR; transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport
D C4K39_1495 Glycine cleavage system transcriptional antiactivator GcvR K03567 gcvR; glycine cleavage system transcriptional repressor
D C4K39_3654 Regulator of nucleoside diphosphate kinase K06140 rnk; regulator of nucleoside diphosphate kinase
D C4K39_4920 hypothetical protein K06140 rnk; regulator of nucleoside diphosphate kinase
D C4K39_3832 Pyrimidine operon regulatory protein PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D C4K39_3513 Transcriptional regulator K07734 paiB; transcriptional regulator
D C4K39_3835 protein YqgE K07735 algH; putative transcriptional regulator
D C4K39_2612 DksA family protein K06204 dksA; RNA polymerase-binding transcription factor
D C4K39_3489 DksA family protein K06204 dksA; RNA polymerase-binding transcription factor
D C4K39_4382 RNA polymerase-binding transcription factor DksA K06204 dksA; RNA polymerase-binding transcription factor
D C4K39_4145 Ribonucleotide reductase transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR
D C4K39_2204 Transcriptional regulatory protein RtcR K14414 rtcR; transcriptional regulatory protein RtcR
D C4K39_4560 Cell division protein MraZ K03925 mraZ; transcriptional regulator MraZ
!
#
#[ BRITE | KEGG2 | KEGG ]
#Last updated: June 7, 2024
#
Classification taken and modified from TRANSFAC 7.0