+D GENES KO
#
KEGG Orthology (KO) - Pseudoclavibacter triregionum
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:psev00010]
D USB125703_01858 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D USB125703_01335 glpX; Fructose-1,6-bisphosphatase class 2 K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D USB125703_01334 fba; Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D USB125703_01850 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D USB125703_01848 gap2_1; Glyceraldehyde-3-phosphate dehydrogenase 2 K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D USB125703_02068 gap2_2; Glyceraldehyde-3-phosphate dehydrogenase-like protein K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D USB125703_01849 pgk; Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D USB125703_00312 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D USB125703_01815 pyk_1; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D USB125703_01862 pyk_2; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D USB125703_01679 aceE; Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D USB125703_01711 aceF; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D USB125703_01712 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D USB125703_00805 ldh2; L-lactate dehydrogenase 2 K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D USB125703_01830 adh_3; Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D USB125703_01964 adh_4; Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D USB125703_00078 adh_1; Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D USB125703_00239 alkH; Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D USB125703_01829 thcA; EPTC-inducible aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D USB125703_00012 acsA_1; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D USB125703_00948 acsA_3; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D USB125703_00820 pgm; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D USB125703_01696 ppgK; Polyphosphate glucokinase K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63]
D USB125703_00076 pckG; Phosphoenolpyruvate carboxykinase [GTP] K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
C 00020 Citrate cycle (TCA cycle) [PATH:psev00020]
D USB125703_01433 gltA2; Citrate synthase 1 K01647 CS; citrate synthase [EC:2.3.3.1]
D USB125703_00468 gltA; 2-methylcitrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D USB125703_01736 acn; Aconitate hydratase A K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D USB125703_01415 icd; Isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D USB125703_01540 kgd; Multifunctional 2-oxoglutarate metabolism enzyme K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
D USB125703_01712 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D USB125703_00352 sucD; Succinate--CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D USB125703_00353 sucC; Succinate--CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D USB125703_00998 sdhA; Succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D USB125703_00997 sdhB; Succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D USB125703_01000 sdhC; Succinate dehydrogenase 2 membrane subunit SdhC K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D USB125703_00999 hypothetical protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D USB125703_01328 fumC; Fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D USB125703_00344 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D USB125703_00935 mqo1; putative malate:quinone oxidoreductase 1 K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D USB125703_02025 cfiB; 2-oxoglutarate carboxylase small subunit K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D USB125703_00076 pckG; Phosphoenolpyruvate carboxykinase [GTP] K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D USB125703_01679 aceE; Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D USB125703_01711 aceF; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:psev00030]
D USB125703_01858 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D USB125703_01857 zwf2; Glucose-6-phosphate 1-dehydrogenase 2 K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D USB125703_01855 pgl; 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D USB125703_01291 gnd; 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D USB125703_01802 rpe; Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D USB125703_01860 tkt; Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D USB125703_01859 tal; Transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D USB125703_00104 rpiB; Ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D USB125703_00607 deoC; Deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D USB125703_00820 pgm; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D USB125703_01290 prs; Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D USB125703_01334 fba; Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D USB125703_01335 glpX; Fructose-1,6-bisphosphatase class 2 K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
C 00040 Pentose and glucuronate interconversions [PATH:psev00040]
D USB125703_00169 rkpK; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D USB125703_00257 gtaB; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D USB125703_01802 rpe; Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
C 00051 Fructose and mannose metabolism [PATH:psev00051]
D USB125703_00804 hldE; Bifunctional protein HldE K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D USB125703_01061 manA; Mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D USB125703_01013 putative phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D USB125703_01067 algC; Phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D USB125703_01002 manC1; Mannose-1-phosphate guanylyltransferase 1 K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D USB125703_01335 glpX; Fructose-1,6-bisphosphatase class 2 K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D USB125703_00506 lacC_1; Tagatose-6-phosphate kinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D USB125703_00919 lacC_2; Tagatose-6-phosphate kinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D USB125703_01334 fba; Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D USB125703_01850 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D USB125703_00104 rpiB; Ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D USB125703_00505 fruA; PTS system fructose-specific EIIABC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
C 00052 Galactose metabolism [PATH:psev00052]
D USB125703_00333 galK; Galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D USB125703_00257 gtaB; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D USB125703_00820 pgm; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
C 00053 Ascorbate and aldarate metabolism [PATH:psev00053]
D USB125703_00169 rkpK; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D USB125703_01012 ulaC; Ascorbate-specific PTS system EIIA component K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D USB125703_00239 alkH; Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00500 Starch and sucrose metabolism [PATH:psev00500]
D USB125703_00257 gtaB; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D USB125703_01879 glgC; Glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D USB125703_00188 glgB; 1,4-alpha-glucan branching enzyme GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D USB125703_01671 glgP; Glycogen phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D USB125703_01884 treS; Trehalose synthase/amylase TreS K05343 treS; maltose alpha-D-glucosyltransferase / alpha-amylase [EC:5.4.99.16 3.2.1.1]
D USB125703_01421 malQ; 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D USB125703_00630 mak; Maltokinase K16146 pep2; maltokinase [EC:2.7.1.175]
D USB125703_00187 glgE1; Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase 1 K16147 glgE; starch synthase (maltosyl-transferring) [EC:2.4.99.16]
D USB125703_01880 glgM; Alpha-maltose-1-phosphate synthase K16148 glgM; alpha-maltose-1-phosphate synthase [EC:2.4.1.342]
D USB125703_00163 glgX_1; Glycogen operon protein GlgX K01214 ISA; isoamylase [EC:3.2.1.68]
D USB125703_00186 glgX_2; Glycogen operon protein GlgX K01214 ISA; isoamylase [EC:3.2.1.68]
D USB125703_00164 treY; Maltooligosyl trehalose synthase K06044 treY; (1->4)-alpha-D-glucan 1-alpha-D-glucosylmutase [EC:5.4.99.15]
D USB125703_00165 treZ; Malto-oligosyltrehalose trehalohydrolase K01236 treZ; maltooligosyltrehalose trehalohydrolase [EC:3.2.1.141]
D USB125703_00820 pgm; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D USB125703_01858 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D USB125703_00804 hldE; Bifunctional protein HldE K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:psev00520]
D USB125703_00895 strH; Beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D USB125703_00804 hldE; Bifunctional protein HldE K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D USB125703_00381 glmS; Glutamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D USB125703_00390 glmM; Phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D USB125703_01289 glmU; Bifunctional protein GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D USB125703_01183 murAA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D USB125703_00900 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D USB125703_01696 ppgK; Polyphosphate glucokinase K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63]
D USB125703_00820 pgm; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D USB125703_00257 gtaB; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D USB125703_00169 rkpK; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D USB125703_00333 galK; Galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D USB125703_01858 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D USB125703_01061 manA; Mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D USB125703_01013 putative phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D USB125703_01067 algC; Phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D USB125703_01002 manC1; Mannose-1-phosphate guanylyltransferase 1 K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D USB125703_01879 glgC; Glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:psev00620]
D USB125703_00012 acsA_1; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D USB125703_00948 acsA_3; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D USB125703_01679 aceE; Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D USB125703_01711 aceF; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D USB125703_01712 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D USB125703_01830 adh_3; Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D USB125703_01964 adh_4; Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D USB125703_00078 adh_1; Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D USB125703_00930 ackA; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D USB125703_00929 pta; Phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D USB125703_01815 pyk_1; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D USB125703_01862 pyk_2; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D USB125703_01843 accC; Biotin carboxylase K11263 bccA; acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14]
D USB125703_01016 accA1; Acetyl-/propionyl-coenzyme A carboxylase alpha chain K11263 bccA; acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14]
D USB125703_00239 alkH; Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D USB125703_01829 thcA; EPTC-inducible aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D USB125703_00938 lldD; Putative L-lactate dehydrogenase K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3]
D USB125703_00805 ldh2; L-lactate dehydrogenase 2 K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D USB125703_02025 cfiB; 2-oxoglutarate carboxylase small subunit K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D USB125703_00344 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D USB125703_00935 mqo1; putative malate:quinone oxidoreductase 1 K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D USB125703_01328 fumC; Fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D USB125703_00076 pckG; Phosphoenolpyruvate carboxykinase [GTP] K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D USB125703_02130 aceB; Malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9]
D USB125703_01645 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:psev00630]
D USB125703_00012 acsA_1; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D USB125703_00948 acsA_3; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D USB125703_02130 aceB; Malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9]
D USB125703_00344 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D USB125703_01433 gltA2; Citrate synthase 1 K01647 CS; citrate synthase [EC:2.3.3.1]
D USB125703_00468 gltA; 2-methylcitrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D USB125703_01736 acn; Aconitate hydratase A K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D USB125703_01843 accC; Biotin carboxylase K11263 bccA; acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14]
D USB125703_01016 accA1; Acetyl-/propionyl-coenzyme A carboxylase alpha chain K11263 bccA; acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14]
D USB125703_01026 accD5; putative propionyl-CoA carboxylase beta chain 5 K27094 accD5; propionyl-CoA/long-chain acyl-CoA carboxylase carboxyl transferase subunit [EC:6.4.1.3 6.4.1.- 2.1.3.15]
D USB125703_00808 putative FAD-linked oxidoreductase K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]
D USB125703_00460 katA; Catalase K03781 katE; catalase [EC:1.11.1.6]
D USB125703_00784 putative protein K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D USB125703_01705 glnA2; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D USB125703_01707 glnA; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D USB125703_01298 glnT; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D USB125703_00335 glyA1; Serine hydroxymethyltransferase 1 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D USB125703_01712 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D USB125703_01540 kgd; Multifunctional 2-oxoglutarate metabolism enzyme K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
D USB125703_00340 purU_1; Formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D USB125703_00470 purU_2; Formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
C 00640 Propanoate metabolism [PATH:psev00640]
D USB125703_00012 acsA_1; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D USB125703_00948 acsA_3; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D USB125703_00464 acsA_2; Acetyl-coenzyme A synthetase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D USB125703_00930 ackA; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D USB125703_00929 pta; Phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D USB125703_00674 bkdA_1; 3-methyl-2-oxobutanoate dehydrogenase subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D USB125703_01485 bkdA_2; 3-methyl-2-oxobutanoate dehydrogenase subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D USB125703_00673 bkdB_1; 3-methyl-2-oxobutanoate dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D USB125703_01486 bkdB_2; 3-methyl-2-oxobutanoate dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D USB125703_00672 pdhC; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D USB125703_01487 bkdC; Dihydrolipoyllysine-residue acyltransferase component of branched-chain alpha-ketoacid dehydrogenase complex K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D USB125703_01712 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D USB125703_00571 fadE; putative acyl-CoA dehydrogenase K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6]
D USB125703_00801 acuI; Acrylyl-CoA reductase AcuI K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-]
D USB125703_01843 accC; Biotin carboxylase K11263 bccA; acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14]
D USB125703_01016 accA1; Acetyl-/propionyl-coenzyme A carboxylase alpha chain K11263 bccA; acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14]
D USB125703_01294 2-aminohexano-6-lactam racemase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D USB125703_01591 gabT; 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D USB125703_01026 accD5; putative propionyl-CoA carboxylase beta chain 5 K27094 accD5; propionyl-CoA/long-chain acyl-CoA carboxylase carboxyl transferase subunit [EC:6.4.1.3 6.4.1.- 2.1.3.15]
D USB125703_00353 sucC; Succinate--CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D USB125703_00352 sucD; Succinate--CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D USB125703_00468 gltA; 2-methylcitrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D USB125703_00466 prpD2; 2-methylcitrate dehydratase 2 K01720 prpD; 2-methylcitrate dehydratase [EC:4.2.1.79]
D USB125703_00467 prpB; 2-methylisocitrate lyase K03417 prpB; methylisocitrate lyase [EC:4.1.3.30]
D USB125703_00805 ldh2; L-lactate dehydrogenase 2 K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
C 00650 Butanoate metabolism [PATH:psev00650]
D USB125703_01966 hbd_2; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D USB125703_01476 hbd_1; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D USB125703_00998 sdhA; Succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D USB125703_00997 sdhB; Succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D USB125703_01000 sdhC; Succinate dehydrogenase 2 membrane subunit SdhC K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D USB125703_00999 hypothetical protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D USB125703_01262 gadB; Glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D USB125703_01294 2-aminohexano-6-lactam racemase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D USB125703_01591 gabT; 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D USB125703_01833 gabD1; Succinate-semialdehyde dehydrogenase [NADP(+)] 1 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D USB125703_00486 sad_1; Succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D USB125703_00764 sad_2; Succinate semialdehyde dehydrogenase [NAD(P)+] Sad K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D USB125703_00654 adh_2; Alcohol dehydrogenase K18369 adh2; alcohol dehydrogenase [EC:1.1.1.-]
D USB125703_01700 ilvG; Acetolactate synthase isozyme 2 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D USB125703_01125 ilvB1; Acetolactate synthase large subunit IlvB1 K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D USB125703_01126 ilvH; Acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D USB125703_01304 gutB; Sorbitol dehydrogenase K00004 BDH; (R,R)-butanediol dehydrogenase / meso-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.4 1.1.1.- 1.1.1.303]
C 00660 C5-Branched dibasic acid metabolism [PATH:psev00660]
D USB125703_01700 ilvG; Acetolactate synthase isozyme 2 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D USB125703_01125 ilvB1; Acetolactate synthase large subunit IlvB1 K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D USB125703_01126 ilvH; Acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D USB125703_00353 sucC; Succinate--CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D USB125703_00352 sucD; Succinate--CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D USB125703_01181 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D USB125703_01182 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D USB125703_01134 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:psev00562]
D USB125703_00889 suhB; Inositol-1-monophosphatase SuhB K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D USB125703_01850 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:psev00190]
D USB125703_01314 NADH dehydrogenase-like protein K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D USB125703_00998 sdhA; Succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D USB125703_00997 sdhB; Succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D USB125703_01000 sdhC; Succinate dehydrogenase 2 membrane subunit SdhC K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D USB125703_00999 hypothetical protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D USB125703_01981 qcrA_2; Cytochrome bc1 complex Rieske iron-sulfur subunit K03890 qcrA; quinol---cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D USB125703_01982 qcrB; Cytochrome bc1 complex cytochrome b subunit K03891 qcrB; quinol---cytochrome-c reductase cytochrome b subunit [EC:7.1.1.8]
D USB125703_01980 qcrC; Cytochrome bc1 complex cytochrome c subunit K03889 qcrC; quinol---cytochrome-c reductase cytochrome c subunit [EC:7.1.1.8]
D USB125703_01861 ctaB; Protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D USB125703_01986 ctaF; Cytochrome c oxidase polypeptide 4 K27109 ctaF; cytochrome c oxidase subunit IV [EC:7.1.1.9]
D USB125703_01979 ctaE; Cytochrome c oxidase subunit 3 K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D USB125703_01987 ctaD; putative cytochrome c oxidase subunit 1 K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D USB125703_01988 ctaC; Cytochrome c oxidase subunit 2 K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D USB125703_01864 ctaA; Heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9]
D USB125703_00031 cydA; Cytochrome bd ubiquinol oxidase subunit 1 K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D USB125703_00030 cydB; Cytochrome bd-I ubiquinol oxidase subunit 2 K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D USB125703_01581 atpA; ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D USB125703_01583 atpD; ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D USB125703_01582 atpG; ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D USB125703_01580 atpH; ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D USB125703_01584 atpC; ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D USB125703_01577 atpB; ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D USB125703_01579 atpF; ATP synthase subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D USB125703_01578 atpE; ATP synthase subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D USB125703_00543 ppa; Inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D USB125703_00321 ppk; Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D USB125703_01620 ppk2; Polyphosphate:ADP/GDP phosphotransferase K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:psev00710]
D USB125703_01849 pgk; Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D USB125703_01848 gap2_1; Glyceraldehyde-3-phosphate dehydrogenase 2 K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D USB125703_02068 gap2_2; Glyceraldehyde-3-phosphate dehydrogenase-like protein K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D USB125703_01334 fba; Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D USB125703_01335 glpX; Fructose-1,6-bisphosphatase class 2 K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D USB125703_01860 tkt; Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D USB125703_00104 rpiB; Ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D USB125703_01850 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D USB125703_01802 rpe; Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D USB125703_01859 tal; Transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D USB125703_00344 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
C 00720 Other carbon fixation pathways [PATH:psev00720]
D USB125703_02025 cfiB; 2-oxoglutarate carboxylase small subunit K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D USB125703_00344 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D USB125703_01328 fumC; Fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D USB125703_00998 sdhA; Succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D USB125703_00997 sdhB; Succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D USB125703_01000 sdhC; Succinate dehydrogenase 2 membrane subunit SdhC K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D USB125703_00999 hypothetical protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D USB125703_00352 sucD; Succinate--CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D USB125703_00353 sucC; Succinate--CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D USB125703_01415 icd; Isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D USB125703_01736 acn; Aconitate hydratase A K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D USB125703_00334 folD; Bifunctional protein FolD protein K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D USB125703_00929 pta; Phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D USB125703_00930 ackA; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D USB125703_00012 acsA_1; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D USB125703_00948 acsA_3; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
C 00680 Methane metabolism [PATH:psev00680]
D USB125703_00335 glyA1; Serine hydroxymethyltransferase 1 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D USB125703_00344 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D USB125703_01334 fba; Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D USB125703_01335 glpX; Fructose-1,6-bisphosphatase class 2 K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D USB125703_00930 ackA; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D USB125703_00929 pta; Phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D USB125703_00012 acsA_1; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D USB125703_00948 acsA_3; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D USB125703_00312 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D USB125703_00779 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D USB125703_00275 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D USB125703_01878 serB; Phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 00910 Nitrogen metabolism [PATH:psev00910]
D USB125703_01650 Putative monooxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D USB125703_00116 gdh; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D USB125703_01705 glnA2; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D USB125703_01707 glnA; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D USB125703_01298 glnT; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D USB125703_01813 gltB; Glutamate synthase [NADPH] large chain K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D USB125703_01814 gltD; Glutamate synthase [NADPH] small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D USB125703_00014 arcC2; Carbamate kinase 2 K00926 arcC; carbamate kinase [EC:2.7.2.2]
D USB125703_00040 mtcA1; Beta-carbonic anhydrase 1 K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:psev00920]
D USB125703_00982 msuE; FMN reductase (NADPH) K00299 ssuE; FMN reductase [EC:1.5.1.38]
D USB125703_01747 sseA; Putative thiosulfate sulfurtransferase SseA K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D USB125703_01571 cysE; Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D USB125703_01318 sbnA; putative siderophore biosynthesis protein SbnA K01738 cysK; cysteine synthase [EC:2.5.1.47]
D USB125703_01572 cysK1; O-acetylserine sulfhydrylase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D USB125703_01546 metXA; Homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D USB125703_01621 metB; Cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:psev00061]
D USB125703_01843 accC; Biotin carboxylase K11263 bccA; acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14]
D USB125703_01016 accA1; Acetyl-/propionyl-coenzyme A carboxylase alpha chain K11263 bccA; acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14]
D USB125703_01675 acpP; Acyl carrier protein K02078 acpP; acyl carrier protein
D USB125703_01677 fabD; Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D USB125703_01676 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase 3 K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D USB125703_01674 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D USB125703_01877 fabG1; 3-oxoacyl-[acyl-carrier-protein] reductase FabG1 K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D USB125703_02022 Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D USB125703_00170 fadD_1; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D USB125703_00171 fadD_2; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:psev00071]
D USB125703_01741 paaJ; 3-oxoadipyl-CoA/3-oxo-5,6-dehydrosuberyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D USB125703_00571 fadE; putative acyl-CoA dehydrogenase K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6]
D USB125703_00415 mmgC_1; Acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D USB125703_01060 mmgC_2; Acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D USB125703_02022 Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D USB125703_00170 fadD_1; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D USB125703_00171 fadD_2; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D USB125703_00514 thcD; Rhodocoxin reductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D USB125703_01830 adh_3; Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D USB125703_01964 adh_4; Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D USB125703_00078 adh_1; Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D USB125703_00239 alkH; Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00074 Mycolic acid biosynthesis [PATH:psev00074]
D USB125703_01843 accC; Biotin carboxylase K11263 bccA; acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14]
D USB125703_01016 accA1; Acetyl-/propionyl-coenzyme A carboxylase alpha chain K11263 bccA; acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14]
D USB125703_00380 acpS; Holo-[acyl-carrier-protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D USB125703_01675 acpP; Acyl carrier protein K02078 acpP; acyl carrier protein
D USB125703_01677 fabD; Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D USB125703_01026 accD5; putative propionyl-CoA carboxylase beta chain 5 K27094 accD5; propionyl-CoA/long-chain acyl-CoA carboxylase carboxyl transferase subunit [EC:6.4.1.3 6.4.1.- 2.1.3.15]
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:psev00561]
D USB125703_00239 alkH; Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D USB125703_01975 dhaK; PEP-dependent dihydroxyacetone kinase, dihydroxyacetone-binding subunit DhaK K05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121]
D USB125703_01974 dhaL; PEP-dependent dihydroxyacetone kinase, ADP-binding subunit DhaL K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121]
D USB125703_01973 dhaM; Protein-lysine deacetylase K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121]
D USB125703_01977 glpK; Glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D USB125703_02088 D,L-glycerol 3-phosphate phosphatase K06117 E3.1.3.21; glycerol-1-phosphatase [EC:3.1.3.21]
D USB125703_02021 plsC_2; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D USB125703_00516 dagK; Diacylglycerol kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
C 00564 Glycerophospholipid metabolism [PATH:psev00564]
D USB125703_01185 gpsA; Glycerol-3-phosphate dehydrogenase [NAD(P)+] K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D USB125703_02021 plsC_2; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D USB125703_00516 dagK; Diacylglycerol kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D USB125703_01916 ugpQ; Glycerophosphodiester phosphodiesterase, cytoplasmic K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D USB125703_00355 glpQ; Glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D USB125703_00198 cdsA_1; Phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D USB125703_00204 cdsA_2; Phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D USB125703_00006 pgsA2; Putative CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyl-transferase 2 K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D USB125703_00886 clsA; Cardiolipin synthase A K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D USB125703_02031 pgsA1; Putative CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyl-transferase 1 K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism [PATH:psev00600]
D USB125703_00895 strH; Beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism [PATH:psev00592]
D USB125703_00571 fadE; putative acyl-CoA dehydrogenase K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6]
D USB125703_01741 paaJ; 3-oxoadipyl-CoA/3-oxo-5,6-dehydrosuberyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids [PATH:psev01040]
D USB125703_00571 fadE; putative acyl-CoA dehydrogenase K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6]
D USB125703_00118 tesB; Acyl-CoA thioesterase 2 K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:psev00230]
D USB125703_00820 pgm; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D USB125703_01290 prs; Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D USB125703_00590 purF; Amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D USB125703_00595 purD; Phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D USB125703_00349 purN; Phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D USB125703_00601 purL; Phosphoribosylformylglycinamidine synthase subunit PurL K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]
D USB125703_00598 purS; Phosphoribosylformylglycinamidine synthase subunit PurS K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3]
D USB125703_00599 purQ; Phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D USB125703_00588 purM; Phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D USB125703_01030 purK; N5-carboxyaminoimidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D USB125703_01034 purE; N5-carboxyaminoimidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D USB125703_00596 purC; Phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D USB125703_00679 purB; Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D USB125703_00348 purH; Bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D USB125703_01682 apt; Adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D USB125703_00518 yhcR; Endonuclease YhcR K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D USB125703_01014 punA; Purine nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D USB125703_00540 hpt; Hypoxanthine-guanine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D USB125703_00368 guaB; Inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D USB125703_00062 ndkA; Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D USB125703_01506 dITP/XTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D USB125703_00359 guaA_1; GMP synthase [glutamine-hydrolyzing] K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D USB125703_00959 guaA_2; GMP synthase [glutamine-hydrolyzing] K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D USB125703_01541 guaB1; putative oxidoreductase K26110 guaB1; GMP reductase [EC:1.7.1.7]
D USB125703_01795 gmk; Guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D USB125703_00231 nrdE1; Ribonucleoside-diphosphate reductase subunit alpha 1 K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D USB125703_00230 nrdF2; Ribonucleoside-diphosphate reductase subunit beta nrdF2 K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D USB125703_01652 dgt; Deoxyguanosinetriphosphate triphosphohydrolase-like protein K01129 dgt; dGTPase [EC:3.1.5.1]
D USB125703_01768 relA; Bifunctional (p)ppGpp synthase/hydrolase RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D USB125703_00521 ppx; Exopolyphosphatase 1 K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D USB125703_00610 purA; Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D USB125703_01011 add; Adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4]
D USB125703_00416 adk; Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D USB125703_01757 AP-4-A phosphorylase K19710 E2.7.7.53; ATP adenylyltransferase [EC:2.7.7.53]
D USB125703_00014 arcC2; Carbamate kinase 2 K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00240 Pyrimidine metabolism [PATH:psev00240]
D USB125703_01793 carB; Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D USB125703_01792 carA; Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D USB125703_01789 pyrB; Aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D USB125703_01790 pyrC; Dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D USB125703_01992 pyrD; Dihydroorotate dehydrogenase (quinone) K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D USB125703_00623 pyrE_1; Orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D USB125703_01794 pyrF; Orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D USB125703_00200 pyrH; Uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D USB125703_00062 ndkA; Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D USB125703_01023 Maf-like protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D USB125703_02083 pyrG; CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D USB125703_02073 cmk; Cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D USB125703_00518 yhcR; Endonuclease YhcR K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D USB125703_00852 upp; Uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D USB125703_01788 pyrR; Bifunctional protein pyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D USB125703_01008 cdd; Cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D USB125703_00655 dcd; dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D USB125703_00231 nrdE1; Ribonucleoside-diphosphate reductase subunit alpha 1 K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D USB125703_00230 nrdF2; Ribonucleoside-diphosphate reductase subunit beta nrdF2 K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D USB125703_01733 dut; Deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D USB125703_01009 deoA; Thymidine phosphorylase K00758 deoA; thymidine phosphorylase [EC:2.4.2.4]
D USB125703_00940 tdk; Thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D USB125703_01631 thyX; Flavin-dependent thymidylate synthase K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D USB125703_01699 Putative hydrolase/MSMEI_3903 K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:psev00250]
D USB125703_00906 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D USB125703_01614 aspA; Aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D USB125703_02096 argG; Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D USB125703_02095 argH; Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D USB125703_00610 purA; Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D USB125703_00679 purB; Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D USB125703_01789 pyrB; Aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D USB125703_01262 gadB; Glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D USB125703_01294 2-aminohexano-6-lactam racemase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D USB125703_01591 gabT; 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D USB125703_01833 gabD1; Succinate-semialdehyde dehydrogenase [NADP(+)] 1 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D USB125703_00486 sad_1; Succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D USB125703_00764 sad_2; Succinate semialdehyde dehydrogenase [NAD(P)+] Sad K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D USB125703_01813 gltB; Glutamate synthase [NADPH] large chain K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D USB125703_01814 gltD; Glutamate synthase [NADPH] small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D USB125703_00116 gdh; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D USB125703_00337 putA_1; Bifunctional protein PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D USB125703_00806 putA_2; Bifunctional protein PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D USB125703_01705 glnA2; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D USB125703_01707 glnA; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D USB125703_01298 glnT; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D USB125703_01793 carB; Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D USB125703_01792 carA; Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D USB125703_00599 purQ; Phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D USB125703_00381 glmS; Glutamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D USB125703_00590 purF; Amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:psev00260]
D USB125703_00933 ask; Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D USB125703_00934 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D USB125703_01564 hom; Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D USB125703_01566 thrB; Homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D USB125703_01565 thrC; Threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D USB125703_00469 ltaE; Low specificity L-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D USB125703_00335 glyA1; Serine hydroxymethyltransferase 1 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D USB125703_00312 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D USB125703_00779 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D USB125703_00275 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D USB125703_01878 serB; Phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D USB125703_00493 Histamine oxidase K00276 AOC3; primary-amine oxidase [EC:1.4.3.21]
D USB125703_01712 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D USB125703_00471 sdaA; L-serine dehydratase 1 K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D USB125703_01317 tdcB; L-threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D USB125703_01811 trpA; Tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D USB125703_01810 trpB; Tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D USB125703_02037 ectB; Diaminobutyrate--2-oxoglutarate transaminase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D USB125703_01939 doeA; Ectoine hydrolase K15783 doeA; ectoine hydrolase [EC:3.5.4.44]
C 00270 Cysteine and methionine metabolism [PATH:psev00270]
D USB125703_01571 cysE; Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D USB125703_01318 sbnA; putative siderophore biosynthesis protein SbnA K01738 cysK; cysteine synthase [EC:2.5.1.47]
D USB125703_01572 cysK1; O-acetylserine sulfhydrylase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D USB125703_02041 xecA1_2; 2-hydroxypropyl-CoM lyase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D USB125703_00225 xecA1_1; 2-hydroxypropyl-CoM lyase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D USB125703_01798 metK; S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D USB125703_00909 aplIM; Modification methylase AplI K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D USB125703_00933 ask; Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D USB125703_00934 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D USB125703_01564 hom; Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D USB125703_01566 thrB; Homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D USB125703_01546 metXA; Homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D USB125703_01621 metB; Cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D USB125703_01547 megL; L-methionine gamma-lyase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D USB125703_01135 ilvE_2; Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D USB125703_01518 gshB; Glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D USB125703_00906 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D USB125703_01747 sseA; Putative thiosulfate sulfurtransferase SseA K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D USB125703_00805 ldh2; L-lactate dehydrogenase 2 K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D USB125703_00344 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D USB125703_00471 sdaA; L-serine dehydratase 1 K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D USB125703_00779 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D USB125703_00275 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:psev00280]
D USB125703_01135 ilvE_2; Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D USB125703_00674 bkdA_1; 3-methyl-2-oxobutanoate dehydrogenase subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D USB125703_01485 bkdA_2; 3-methyl-2-oxobutanoate dehydrogenase subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D USB125703_00673 bkdB_1; 3-methyl-2-oxobutanoate dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D USB125703_01486 bkdB_2; 3-methyl-2-oxobutanoate dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D USB125703_00672 pdhC; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D USB125703_01487 bkdC; Dihydrolipoyllysine-residue acyltransferase component of branched-chain alpha-ketoacid dehydrogenase complex K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D USB125703_01712 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D USB125703_01741 paaJ; 3-oxoadipyl-CoA/3-oxo-5,6-dehydrosuberyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D USB125703_01843 accC; Biotin carboxylase K11263 bccA; acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14]
D USB125703_01016 accA1; Acetyl-/propionyl-coenzyme A carboxylase alpha chain K11263 bccA; acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14]
D USB125703_01026 accD5; putative propionyl-CoA carboxylase beta chain 5 K27094 accD5; propionyl-CoA/long-chain acyl-CoA carboxylase carboxyl transferase subunit [EC:6.4.1.3 6.4.1.- 2.1.3.15]
D USB125703_00239 alkH; Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D USB125703_01591 gabT; 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:psev00290]
D USB125703_01317 tdcB; L-threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D USB125703_01181 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D USB125703_01182 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D USB125703_01134 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D USB125703_01700 ilvG; Acetolactate synthase isozyme 2 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D USB125703_01125 ilvB1; Acetolactate synthase large subunit IlvB1 K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D USB125703_01126 ilvH; Acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D USB125703_01127 ilvC; Ketol-acid reductoisomerase (NADP(+)) K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D USB125703_01124 ilvD; Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D USB125703_01135 ilvE_2; Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D USB125703_01645 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:psev00300]
D USB125703_01564 hom; Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D USB125703_00933 ask; Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D USB125703_00934 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D USB125703_00009 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D USB125703_01628 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D USB125703_01435 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D USB125703_01404 dapC; putative N-succinyldiaminopimelate aminotransferase DapC K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
D USB125703_01436 dapE_1; Putative succinyl-diaminopimelate desuccinylase DapE K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D USB125703_02123 dapF; Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D USB125703_01563 lysA; Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D USB125703_00720 lysN; 2-aminoadipate transaminase K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D USB125703_02010 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D USB125703_02009 murF_2; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:psev00310]
D USB125703_01712 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D USB125703_00415 mmgC_1; Acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D USB125703_01060 mmgC_2; Acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D USB125703_01591 gabT; 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D USB125703_01833 gabD1; Succinate-semialdehyde dehydrogenase [NADP(+)] 1 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D USB125703_00486 sad_1; Succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D USB125703_00764 sad_2; Succinate semialdehyde dehydrogenase [NAD(P)+] Sad K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D USB125703_00239 alkH; Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00220 Arginine biosynthesis [PATH:psev00220]
D USB125703_02097 argF; Ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D USB125703_02096 argG; Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D USB125703_02095 argH; Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D USB125703_00599 purQ; Phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D USB125703_01705 glnA2; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D USB125703_01707 glnA; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D USB125703_01298 glnT; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D USB125703_01793 carB; Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D USB125703_01792 carA; Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D USB125703_00014 arcC2; Carbamate kinase 2 K00926 arcC; carbamate kinase [EC:2.7.2.2]
D USB125703_00116 gdh; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D USB125703_00906 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D USB125703_00520 argA; Amino-acid acetyltransferase K00619 argA; amino-acid N-acetyltransferase [EC:2.3.1.1]
D USB125703_02099 argJ; Arginine biosynthesis bifunctional protein ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D USB125703_02098 argB; Acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D USB125703_02100 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D USB125703_01940 argE; Acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
C 00330 Arginine and proline metabolism [PATH:psev00330]
D USB125703_01293 cadA_2; Inducible lysine decarboxylase K01584 adiA; arginine decarboxylase [EC:4.1.1.19]
D USB125703_00591 aguA; Agmatine deiminase K10536 aguA; agmatine deiminase [EC:3.5.3.12]
D USB125703_01138 puo; Putrescine oxidase K03343 puo; putrescine oxidase [EC:1.4.3.10]
D USB125703_00239 alkH; Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D USB125703_00345 hypothetical protein K00657 speG; diamine N-acetyltransferase [EC:2.3.1.57]
D USB125703_00766 fmdA; Formamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D USB125703_01551 amiB2; Putative amidase AmiB2 K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D USB125703_00855 proC; Pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D USB125703_00337 putA_1; Bifunctional protein PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D USB125703_00806 putA_2; Bifunctional protein PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D USB125703_01662 proB; Glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D USB125703_01664 proA; Gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D USB125703_00906 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D USB125703_00472 putative protein/GBAA_0901/BAS0853 K01777 prdF; proline racemase [EC:5.1.1.4]
C 00340 Histidine metabolism [PATH:psev00340]
D USB125703_01804 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D USB125703_01803 hisE; Phosphoribosyl-ATP pyrophosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]
D USB125703_01806 hisI; Phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D USB125703_02114 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase K24017 priA; phosphoribosyl isomerase A [EC:5.3.1.16 5.3.1.24]
D USB125703_02115 hisH; Imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D USB125703_01805 hisF; Imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D USB125703_02116 hisB; Imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D USB125703_02117 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D USB125703_01489 pat; Putative phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D USB125703_01535 hisN; Histidinol-phosphatase K05602 hisN; histidinol-phosphatase [EC:3.1.3.15]
D USB125703_01994 hisD; Histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D USB125703_00239 alkH; Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00350 Tyrosine metabolism [PATH:psev00350]
D USB125703_00906 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D USB125703_02117 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D USB125703_01489 pat; Putative phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D USB125703_00493 Histamine oxidase K00276 AOC3; primary-amine oxidase [EC:1.4.3.21]
D USB125703_01830 adh_3; Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D USB125703_01964 adh_4; Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D USB125703_00078 adh_1; Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D USB125703_01010 amnC; 2-aminomuconic 6-semialdehyde dehydrogenase K00151 hpaE; 5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase [EC:1.2.1.60]
D USB125703_00508 hpcG; 2-oxo-hept-4-ene-1,7-dioate hydratase K02509 hpaH; 2-oxo-hept-3-ene-1,7-dioate hydratase [EC:4.2.1.-]
D USB125703_00509 hpcH; 4-hydroxy-2-oxo-heptane-1,7-dioate aldolase K02510 hpaI; 4-hydroxy-2-oxoheptanedioate aldolase [EC:4.1.2.52]
D USB125703_01833 gabD1; Succinate-semialdehyde dehydrogenase [NADP(+)] 1 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D USB125703_00486 sad_1; Succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D USB125703_00764 sad_2; Succinate semialdehyde dehydrogenase [NAD(P)+] Sad K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00360 Phenylalanine metabolism [PATH:psev00360]
D USB125703_00493 Histamine oxidase K00276 AOC3; primary-amine oxidase [EC:1.4.3.21]
D USB125703_01950 paaK; Phenylacetate-coenzyme A ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30]
D USB125703_01949 paaI; Acyl-coenzyme A thioesterase PaaI K02614 paaI; acyl-CoA thioesterase [EC:3.1.2.-]
D USB125703_01948 paaA; 1,2-phenylacetyl-CoA epoxidase, subunit A K02609 paaA; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA [EC:1.14.13.149]
D USB125703_01947 paaB; 1,2-phenylacetyl-CoA epoxidase, subunit B K02610 paaB; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB
D USB125703_01946 paaC; 1,2-phenylacetyl-CoA epoxidase, subunit C K02611 paaC; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaC [EC:1.14.13.149]
D USB125703_01945 paaD; Putative 1,2-phenylacetyl-CoA epoxidase, subunit D K02612 paaD; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD
D USB125703_01944 paaE; 1,2-phenylacetyl-CoA epoxidase, subunit E K02613 paaE; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE
D USB125703_01958 paaZ; Bifunctional protein PaaZ K02618 paaZ; oxepin-CoA hydrolase / 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase [EC:3.3.2.12 1.2.1.91]
D USB125703_01966 hbd_2; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D USB125703_01476 hbd_1; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D USB125703_00906 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D USB125703_02117 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D USB125703_01489 pat; Putative phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D USB125703_00766 fmdA; Formamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D USB125703_01551 amiB2; Putative amidase AmiB2 K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D USB125703_01867 hcaC; 3-phenylpropionate/cinnamic acid dioxygenase ferredoxin subunit K05710 hcaC; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin component
D USB125703_00514 thcD; Rhodocoxin reductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
C 00380 Tryptophan metabolism [PATH:psev00380]
D USB125703_01712 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D USB125703_00415 mmgC_1; Acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D USB125703_01060 mmgC_2; Acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D USB125703_00239 alkH; Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D USB125703_00766 fmdA; Formamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D USB125703_01551 amiB2; Putative amidase AmiB2 K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D USB125703_00460 katA; Catalase K03781 katE; catalase [EC:1.11.1.6]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:psev00400]
D USB125703_02020 aroH; Phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D USB125703_01782 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D USB125703_01784 aroQ; 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D USB125703_01781 aroK; Shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D USB125703_01537 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D USB125703_01780 aroC; Chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D USB125703_00341 trpE; Anthranilate synthase component 1 K13503 trpEG; anthranilate synthase [EC:4.1.3.27]
D USB125703_01978 trpD; Anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D USB125703_02114 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase K24017 priA; phosphoribosyl isomerase A [EC:5.3.1.16 5.3.1.24]
D USB125703_01809 trpC; Indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D USB125703_01811 trpA; Tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D USB125703_01810 trpB; Tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D USB125703_00605 tyrA_1; T-protein K04092 tyrA1; chorismate mutase [EC:5.4.99.5]
D USB125703_02074 tyrA_2; Prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D USB125703_00821 pheA; Prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D USB125703_00906 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D USB125703_02117 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D USB125703_01489 pat; Putative phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:psev00410]
D USB125703_00684 panD; Aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D USB125703_01262 gadB; Glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D USB125703_01294 2-aminohexano-6-lactam racemase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D USB125703_01591 gabT; 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D USB125703_00493 Histamine oxidase K00276 AOC3; primary-amine oxidase [EC:1.4.3.21]
D USB125703_00239 alkH; Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D USB125703_00529 panC; Pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D USB125703_01699 Putative hydrolase/MSMEI_3903 K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D USB125703_00571 fadE; putative acyl-CoA dehydrogenase K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6]
C 00430 Taurine and hypotaurine metabolism [PATH:psev00430]
D USB125703_01262 gadB; Glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D USB125703_00929 pta; Phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D USB125703_00930 ackA; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:psev00450]
D USB125703_01621 metB; Cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D USB125703_02041 xecA1_2; 2-hydroxypropyl-CoM lyase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D USB125703_00225 xecA1_1; 2-hydroxypropyl-CoM lyase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D USB125703_00718 trxB_1; Thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D USB125703_01274 metG; Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism
D USB125703_00335 glyA1; Serine hydroxymethyltransferase 1 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:psev00470]
D USB125703_00379 alr; Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D USB125703_00721 ddlB; D-alanine--D-alanine ligase B K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D USB125703_01186 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D USB125703_00599 purQ; Phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D USB125703_01504 murI; Glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D USB125703_02007 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D USB125703_02123 dapF; Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D USB125703_01563 lysA; Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D USB125703_00472 putative protein/GBAA_0901/BAS0853 K01777 prdF; proline racemase [EC:5.1.1.4]
C 00480 Glutathione metabolism [PATH:psev00480]
D USB125703_01841 hypothetical protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D USB125703_00960 Putative glutamate--cysteine ligase 2 K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-]
D USB125703_01518 gshB; Glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D USB125703_01713 pepA; putative cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D USB125703_00113 pepN; Aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D USB125703_01415 icd; Isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D USB125703_01291 gnd; 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D USB125703_01857 zwf2; Glucose-6-phosphate 1-dehydrogenase 2 K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis [PATH:psev00515]
D USB125703_01272 pmt; putative dolichyl-phosphate-mannose--protein mannosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
C 00514 Other types of O-glycan biosynthesis [PATH:psev00514]
D USB125703_01272 pmt; putative dolichyl-phosphate-mannose--protein mannosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:psev00511]
D USB125703_00895 strH; Beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis [PATH:psev00542]
D USB125703_01575 wecA; Decaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:psev00541]
D USB125703_00257 gtaB; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D USB125703_00169 rkpK; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D USB125703_01043 rmlA; Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D USB125703_01040 strE; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D USB125703_01042 rmlC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D USB125703_01039 strL; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D USB125703_01061 manA; Mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D USB125703_01013 putative phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D USB125703_01067 algC; Phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D USB125703_01002 manC1; Mannose-1-phosphate guanylyltransferase 1 K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D USB125703_01289 glmU; Bifunctional protein GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
C 00550 Peptidoglycan biosynthesis [PATH:psev00550]
D USB125703_01183 murAA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D USB125703_00900 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D USB125703_02004 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D USB125703_02007 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D USB125703_02010 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D USB125703_00721 ddlB; D-alanine--D-alanine ligase B K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D USB125703_01186 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D USB125703_02009 murF_2; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D USB125703_01648 Trans,polycis-polyprenyl diphosphate synthase ((2Z,6E)-farnesyl diphosphate specific) K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D USB125703_01900 uppP; Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D USB125703_02008 mraY; Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D USB125703_02005 murG_2; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D USB125703_02011 pbpB; Penicillin-binding protein PbpB K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D USB125703_00759 pbpA; Penicillin-binding protein A K05364 pbpA; penicillin-binding protein A
D USB125703_00963 dac; D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D USB125703_01392 dacB; D-alanyl-D-alanine carboxypeptidase DacB K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D USB125703_00816 yodJ_1; Putative carboxypeptidase YodJ K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D USB125703_00818 yodJ_2; Putative carboxypeptidase YodJ K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D USB125703_01717 murF_1; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
C 00552 Teichoic acid biosynthesis [PATH:psev00552]
D USB125703_01900 uppP; Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D USB125703_01575 wecA; Decaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
D USB125703_01575 wecA; Decaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00543 Exopolysaccharide biosynthesis [PATH:psev00543]
D USB125703_01575 wecA; Decaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D USB125703_01571 cysE; Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:psev00730]
D USB125703_00185 iscS; IscS-like cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D USB125703_01737 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D USB125703_01191 thiL; Thiamine-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D USB125703_01536 rsgA; Small ribosomal subunit biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D USB125703_00416 adk; Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:psev00740]
D USB125703_00985 ribBA; Riboflavin biosynthesis protein RibBA K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D USB125703_01611 ribF; Riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D USB125703_00982 msuE; FMN reductase (NADPH) K00299 ssuE; FMN reductase [EC:1.5.1.38]
C 00750 Vitamin B6 metabolism [PATH:psev00750]
D USB125703_00275 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D USB125703_01565 thrC; Threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D USB125703_01758 pdxS; Pyridoxal 5'-phosphate synthase subunit PdxS K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6]
D USB125703_01759 pdxT; Pyridoxal 5'-phosphate synthase subunit PdxT K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6]
C 00760 Nicotinate and nicotinamide metabolism [PATH:psev00760]
D USB125703_00894 nadX; L-aspartate dehydrogenase K06989 nadX; aspartate dehydrogenase [EC:1.4.1.21]
D USB125703_01503 pncB1; Nicotinate phosphoribosyltransferase pncB1 K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D USB125703_01014 punA; Purine nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D USB125703_00518 yhcR; Endonuclease YhcR K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D USB125703_00056 nadD; putative nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D USB125703_01458 nudC; NADH pyrophosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D USB125703_00125 nadE; NH(3)-dependent NAD(+) synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D USB125703_00005 Protein MG115 K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D USB125703_00602 Protein MG115 K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D USB125703_00964 pncA; Nicotinamidase/pyrazinamidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D USB125703_02085 ppnK; NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D USB125703_01833 gabD1; Succinate-semialdehyde dehydrogenase [NADP(+)] 1 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D USB125703_00486 sad_1; Succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D USB125703_00764 sad_2; Succinate semialdehyde dehydrogenase [NAD(P)+] Sad K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:psev00770]
D USB125703_01700 ilvG; Acetolactate synthase isozyme 2 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D USB125703_01125 ilvB1; Acetolactate synthase large subunit IlvB1 K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D USB125703_01126 ilvH; Acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D USB125703_01127 ilvC; Ketol-acid reductoisomerase (NADP(+)) K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D USB125703_01124 ilvD; Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D USB125703_01704 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D USB125703_01607 hypothetical protein K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D USB125703_00529 panC; Pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D USB125703_00386 coaA; Pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33]
D USB125703_01797 coaBC; Coenzyme A biosynthesis bifunctional protein CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D USB125703_01203 coaD; Phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D USB125703_01835 coaE; Dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D USB125703_00380 acpS; Holo-[acyl-carrier-protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D USB125703_01135 ilvE_2; Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D USB125703_01699 Putative hydrolase/MSMEI_3903 K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D USB125703_00684 panD; Aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D USB125703_00239 alkH; Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00780 Biotin metabolism [PATH:psev00780]
D USB125703_01674 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D USB125703_01877 fabG1; 3-oxoacyl-[acyl-carrier-protein] reductase FabG1 K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D USB125703_01028 birA; Bifunctional ligase/repressor BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:psev00785]
D USB125703_00815 lipM; Octanoyltransferase LipM K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D USB125703_01712 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D USB125703_01679 aceE; Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D USB125703_01711 aceF; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D USB125703_01540 kgd; Multifunctional 2-oxoglutarate metabolism enzyme K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
D USB125703_00674 bkdA_1; 3-methyl-2-oxobutanoate dehydrogenase subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D USB125703_01485 bkdA_2; 3-methyl-2-oxobutanoate dehydrogenase subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D USB125703_00673 bkdB_1; 3-methyl-2-oxobutanoate dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D USB125703_01486 bkdB_2; 3-methyl-2-oxobutanoate dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D USB125703_00672 pdhC; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D USB125703_01487 bkdC; Dihydrolipoyllysine-residue acyltransferase component of branched-chain alpha-ketoacid dehydrogenase complex K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
C 00790 Folate biosynthesis [PATH:psev00790]
D USB125703_00536 folB; Dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D USB125703_00535 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridinepyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D USB125703_00537 folP1; Dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D USB125703_00064 folC; Dihydrofolate synthase/folylpolyglutamate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D USB125703_00985 ribBA; Riboflavin biosynthesis protein RibBA K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D USB125703_02040 pabB; Aminodeoxychorismate synthase component 1 K13950 pabAB; para-aminobenzoate synthetase [EC:2.6.1.85]
D USB125703_00127 ilvE_1; Branched-chain-amino-acid aminotransferase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D USB125703_01922 hypothetical protein K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
C 00670 One carbon pool by folate [PATH:psev00670]
D USB125703_00334 folD; Bifunctional protein FolD protein K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D USB125703_00335 glyA1; Serine hydroxymethyltransferase 1 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D USB125703_00349 purN; Phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D USB125703_00348 purH; Bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D USB125703_01800 fmt; Methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D USB125703_01631 thyX; Flavin-dependent thymidylate synthase K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D USB125703_00340 purU_1; Formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D USB125703_00470 purU_2; Formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D USB125703_00258 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:psev00860]
D USB125703_01142 gltX; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D USB125703_00789 hemA; Glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D USB125703_00800 hemL; Glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D USB125703_00799 hemB; Delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D USB125703_00797 hemC; Porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D USB125703_00790 hemE; Uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D USB125703_00831 hypothetical protein K00230 hemG; menaquinone-dependent protoporphyrinogen oxidase [EC:1.3.5.3]
D USB125703_01480 hypothetical protein K00230 hemG; menaquinone-dependent protoporphyrinogen oxidase [EC:1.3.5.3]
D USB125703_00791 hemY; Protoporphyrinogen oxidase K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15]
D USB125703_00796 hemH; Ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D USB125703_00798 hypothetical protein K13542 cobA-hemD; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75]
D USB125703_01861 ctaB; Protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D USB125703_01864 ctaA; Heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:psev00130]
D USB125703_00881 menG_2; Demethylmenaquinone methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D USB125703_00880 dhbC; Isochorismate synthase DhbC K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
D USB125703_00878 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9]
D USB125703_00871 menC; o-succinylbenzoate synthase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113]
D USB125703_00874 menE; putative 2-succinylbenzoate--CoA ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26]
D USB125703_00873 menB; 1,4-dihydroxy-2-naphthoyl-CoA synthase K01661 menB; naphthoate synthase [EC:4.1.3.36]
D USB125703_00875 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:psev00900]
D USB125703_01737 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D USB125703_01592 dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D USB125703_00294 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K12506 ispDF; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase / 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:2.7.7.60 4.6.1.12]
D USB125703_01277 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D USB125703_01594 ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D USB125703_01332 ispH2; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D USB125703_02016 hexs-b; Hexaprenyl-diphosphate synthase large subunit ((2E,6E)-farnesyl-diphosphate specific) K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D USB125703_01324 (2Z,6E)-farnesyl diphosphate synthase K12503 uppS; short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68]
D USB125703_01648 Trans,polycis-polyprenyl diphosphate synthase ((2Z,6E)-farnesyl diphosphate specific) K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
D USB125703_00239 alkH; Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00907 Pinene, camphor and geraniol degradation [PATH:psev00907]
D USB125703_00741 ydaD_1; General stress protein 39 K13775 atuG; citronellol/citronellal dehydrogenase
D USB125703_01741 paaJ; 3-oxoadipyl-CoA/3-oxo-5,6-dehydrosuberyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D USB125703_01860 tkt; Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:psev00523]
D USB125703_01043 rmlA; Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D USB125703_01040 strE; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D USB125703_01042 rmlC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D USB125703_01039 strL; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D USB125703_01051 wbiB; dTDP-L-rhamnose 4-epimerase K17947 wbiB; dTDP-L-rhamnose 4-epimerase [EC:5.1.3.25]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
D USB125703_00880 dhbC; Isochorismate synthase DhbC K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
C 01055 Biosynthesis of vancomycin group antibiotics
D USB125703_01040 strE; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis [PATH:psev00332]
D USB125703_01662 proB; Glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D USB125703_01664 proA; Gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:psev00261]
D USB125703_00933 ask; Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D USB125703_00934 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D USB125703_00009 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D USB125703_01628 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:psev00521]
D USB125703_00820 pgm; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D USB125703_00889 suhB; Inositol-1-monophosphatase SuhB K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D USB125703_01043 rmlA; Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D USB125703_01040 strE; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D USB125703_01042 rmlC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D USB125703_01039 strL; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
C 00525 Acarbose and validamycin biosynthesis [PATH:psev00525]
D USB125703_01043 rmlA; Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D USB125703_01040 strE; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:psev00401]
D USB125703_02074 tyrA_2; Prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D USB125703_00906 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D USB125703_02117 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D USB125703_01489 pat; Putative phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
C 00333 Prodigiosin biosynthesis
D USB125703_01677 fabD; Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D USB125703_01877 fabG1; 3-oxoacyl-[acyl-carrier-protein] reductase FabG1 K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D USB125703_01675 acpP; Acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites
D USB125703_01798 metK; S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:psev00362]
D USB125703_01741 paaJ; 3-oxoadipyl-CoA/3-oxo-5,6-dehydrosuberyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D USB125703_00514 thcD; Rhodocoxin reductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D USB125703_00513 thcC; Rhodocoxin K04755 fdx; ferredoxin, 2Fe-2S
D USB125703_00415 mmgC_1; Acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D USB125703_01060 mmgC_2; Acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D USB125703_01966 hbd_2; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D USB125703_01476 hbd_1; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
C 00627 Aminobenzoate degradation [PATH:psev00627]
D USB125703_00766 fmdA; Formamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D USB125703_01551 amiB2; Putative amidase AmiB2 K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D USB125703_00554 mobA; 3-hydroxybenzoate 4-monooxygenase K03380 E1.14.13.7; phenol 2-monooxygenase (NADPH) [EC:1.14.13.7]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:psev00625]
D USB125703_01830 adh_3; Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D USB125703_01964 adh_4; Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D USB125703_00078 adh_1; Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D USB125703_00239 alkH; Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
D USB125703_00554 mobA; 3-hydroxybenzoate 4-monooxygenase K03380 E1.14.13.7; phenol 2-monooxygenase (NADPH) [EC:1.14.13.7]
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
D USB125703_01741 paaJ; 3-oxoadipyl-CoA/3-oxo-5,6-dehydrosuberyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation [PATH:psev00643]
D USB125703_00766 fmdA; Formamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D USB125703_01551 amiB2; Putative amidase AmiB2 K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation [PATH:psev00626]
D USB125703_01830 adh_3; Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D USB125703_01964 adh_4; Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D USB125703_00078 adh_1; Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:psev03020]
D USB125703_00453 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D USB125703_00452 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D USB125703_00395 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D USB125703_01796 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
D USB125703_00280 hypothetical protein K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:psev03010]
D USB125703_01832 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D USB125703_00206 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D USB125703_00430 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D USB125703_01773 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D USB125703_00420 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D USB125703_00704 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D USB125703_00442 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D USB125703_00423 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D USB125703_00391 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D USB125703_00437 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D USB125703_00396 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D USB125703_00443 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D USB125703_00397 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D USB125703_00663 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D USB125703_01619 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D USB125703_01221 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D USB125703_00427 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D USB125703_00702 rpsR1; 30S ribosomal protein S18 1 K02963 RP-S18; small subunit ribosomal protein S18
D USB125703_00432 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D USB125703_00018 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D USB125703_00915 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D USB125703_00433 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D USB125703_00436 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D USB125703_00435 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D USB125703_00424 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D USB125703_00422 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D USB125703_00921 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D USB125703_00701 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D USB125703_00920 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D USB125703_00914 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D USB125703_00392 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D USB125703_00426 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D USB125703_00418 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D USB125703_00429 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D USB125703_00394 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D USB125703_00421 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D USB125703_01230 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D USB125703_02108 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D USB125703_00060 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D USB125703_00431 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D USB125703_00434 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D USB125703_00425 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D USB125703_01300 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D USB125703_00059 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D USB125703_00665 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D USB125703_00428 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D USB125703_00419 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D USB125703_01882 rpmE2; 50S ribosomal protein L31 type B K02909 RP-L31; large subunit ribosomal protein L31
D USB125703_01205 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D USB125703_00664 rpmG2; 50S ribosomal protein L33 2 K02913 RP-L33; large subunit ribosomal protein L33
D USB125703_00729 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D USB125703_02109 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D USB125703_00398 rpmJ_1; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D USB125703_00896 rpmJ_2; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D USB125703_01082 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D USB125703_02092 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D USB125703_01083 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D USB125703_02091 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D USB125703_02090 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D USB125703_01084 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:psev00970]
D USB125703_00252 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D USB125703_00052 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D USB125703_00739 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D USB125703_01558 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D USB125703_00265 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D USB125703_00839 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D USB125703_00126 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D USB125703_01656 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D USB125703_00546 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D USB125703_01753 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D USB125703_01955 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D USB125703_01288 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D USB125703_01144 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D USB125703_00545 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D USB125703_01165 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D USB125703_01752 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D USB125703_00656 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D USB125703_00101 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D USB125703_00129 tRNA-His K14226 tRNA-His; tRNA His
D USB125703_00737 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D USB125703_01898 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D USB125703_00765 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D USB125703_01508 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D USB125703_01820 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D USB125703_00329 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D USB125703_01095 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D USB125703_01667 tRNA-Met K14230 tRNA-Met; tRNA Met
D USB125703_01464 tRNA-Met K14230 tRNA-Met; tRNA Met
D USB125703_00892 tRNA-Met K14230 tRNA-Met; tRNA Met
D USB125703_00547 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D USB125703_02064 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D USB125703_00943 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D USB125703_00099 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D USB125703_00827 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D USB125703_00825 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D USB125703_00925 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D USB125703_00515 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D USB125703_00958 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D USB125703_00891 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D USB125703_00291 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D USB125703_00911 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D USB125703_00888 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D USB125703_01684 tRNA-Val K14237 tRNA-Val; tRNA Val
D USB125703_01754 tRNA-Val K14237 tRNA-Val; tRNA Val
D USB125703_01956 tRNA-Val K14237 tRNA-Val; tRNA Val
D USB125703_01751 tRNA-Val K14237 tRNA-Val; tRNA Val
D USB125703_01142 gltX; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D USB125703_00174 gatA; Glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D USB125703_00173 gatB; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D USB125703_00175 gatC; Glutamyl-tRNA(Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D USB125703_01776 alaS; Alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D USB125703_01649 glyQS; Glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D USB125703_01756 thrS; Threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D USB125703_00823 serS; Serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D USB125703_00293 cysS; Cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D USB125703_01274 metG; Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D USB125703_01800 fmt; Methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D USB125703_00080 valS; Valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D USB125703_00027 leuS; Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D USB125703_00065 ileS; Isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D USB125703_00528 lysS1; Lysine--tRNA ligase 1 K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D USB125703_01561 argS; Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D USB125703_01601 proS; Proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D USB125703_01307 hisS; Histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D USB125703_02102 pheS; Phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D USB125703_02101 pheT; Phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D USB125703_02093 tyrS; Tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D USB125703_00988 trpS; Tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:psev03060]
D USB125703_00417 secY; Protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D USB125703_00912 secE; Protein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D USB125703_01851 secG; putative protein-export membrane protein SecG K03075 secG; preprotein translocase subunit SecG
D USB125703_01766 secD; Protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D USB125703_01767 secF; Protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D USB125703_01765 hypothetical protein K03210 yajC; preprotein translocase subunit YajC
D USB125703_00726 yidC; Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D USB125703_01080 secA; Protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D USB125703_01219 ffh; Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D USB125703_00928 Bacteria_small_SRP K01983 ffs; SRP RNA
D USB125703_01217 ftsY; Signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor
D USB125703_01911 tatA; Sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D USB125703_01441 tatB; Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D USB125703_01912 tatC; Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC
D USB125703_00219 lepB; Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D USB125703_01997 lspA_2; Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D USB125703_00144 lspA_1; Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:psev04122]
D USB125703_00185 iscS; IscS-like cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D USB125703_01747 sseA; Putative thiosulfate sulfurtransferase SseA K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D USB125703_00179 mnmA; tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
C 03050 Proteasome
C 03018 RNA degradation [PATH:psev03018]
D USB125703_00061 rne; Ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D USB125703_01622 pnp; Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D USB125703_00567 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D USB125703_01567 rho; Transcription termination factor Rho K03628 rho; transcription termination factor Rho
D USB125703_00008 rnj; Ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D USB125703_00639 dnaK; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D USB125703_00286 groL1; 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D USB125703_00321 ppk; Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D USB125703_01620 ppk2; Polyphosphate:ADP/GDP phosphotransferase K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D USB125703_00712 cca; CCA-adding enzyme K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:psev03030]
D USB125703_01883 polC; DNA polymerase III PolC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D USB125703_01340 Putative bifunctional exonuclease/endonuclease protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D USB125703_01995 dnaE1; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D USB125703_00931 dnaX_1; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D USB125703_00956 dnaX_2; DNA polymerase III subunit gamma/tau K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D USB125703_00022 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D USB125703_00731 griR; Beta sliding clamp GriR K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D USB125703_00700 dnaB; Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D USB125703_01653 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D USB125703_00122 ssb_1; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D USB125703_00132 ssb1; Single-stranded DNA-binding protein 1 K03111 ssb; single-strand DNA-binding protein
D USB125703_00703 ssb_2; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D USB125703_01018 rnhA; Ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D USB125703_00218 rnhB; Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D USB125703_01825 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D USB125703_00177 ligA; DNA ligase A K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:psev03410]
D USB125703_01550 ung; Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D USB125703_01606 mutY; Adenine DNA glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D USB125703_02094 Putative 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D USB125703_01207 fpg1; Formamidopyrimidine-DNA glycosylase 1 K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D USB125703_00103 nei1; Endonuclease 8 1 K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D USB125703_00480 nei; Endonuclease 8 K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D USB125703_01502 alkA; putative bifunctional transcriptional activator/DNA repair enzyme AlkA K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D USB125703_00625 xthA; Exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D USB125703_00989 exoA; Exodeoxyribonuclease K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D USB125703_01825 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D USB125703_00177 ligA; DNA ligase A K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:psev03420]
D USB125703_01303 mfd; Transcription-repair-coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D USB125703_01844 uvrA_1; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A
D USB125703_01838 uvrB; UvrABC system protein B K03702 uvrB; excinuclease ABC subunit B
D USB125703_01845 uvrC; UvrABC system protein C K03703 uvrC; excinuclease ABC subunit C
D USB125703_00354 uvrD1; ATP-dependent DNA helicase UvrD1 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D USB125703_01157 pcrA_1; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D USB125703_01456 pcrA_2; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D USB125703_01459 uvrD2; ATP-dependent DNA helicase UvrD2 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D USB125703_01825 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D USB125703_00177 ligA; DNA ligase A K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D USB125703_00280 hypothetical protein K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
C 03430 Mismatch repair [PATH:psev03430]
D USB125703_00354 uvrD1; ATP-dependent DNA helicase UvrD1 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D USB125703_01157 pcrA_1; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D USB125703_01456 pcrA_2; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D USB125703_01459 uvrD2; ATP-dependent DNA helicase UvrD2 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D USB125703_01331 xseA; Exodeoxyribonuclease 7 large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D USB125703_01330 xseB; Exodeoxyribonuclease 7 small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D USB125703_00122 ssb_1; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D USB125703_00132 ssb1; Single-stranded DNA-binding protein 1 K03111 ssb; single-strand DNA-binding protein
D USB125703_00703 ssb_2; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D USB125703_01995 dnaE1; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D USB125703_00731 griR; Beta sliding clamp GriR K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D USB125703_00931 dnaX_1; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D USB125703_00022 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D USB125703_00956 dnaX_2; DNA polymerase III subunit gamma/tau K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D USB125703_01883 polC; DNA polymerase III PolC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D USB125703_01340 Putative bifunctional exonuclease/endonuclease protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D USB125703_00177 ligA; DNA ligase A K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:psev03440]
D USB125703_00122 ssb_1; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D USB125703_00132 ssb1; Single-stranded DNA-binding protein 1 K03111 ssb; single-strand DNA-binding protein
D USB125703_00703 ssb_2; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D USB125703_00732 recF_2; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D USB125703_01647 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D USB125703_00932 recR; Recombination protein RecR K06187 recR; recombination protein RecR
D USB125703_02128 recA; Protein RecA K03553 recA; recombination protein RecA
D USB125703_01825 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D USB125703_01763 ruvA; Holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D USB125703_01764 ruvB; Holliday junction ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D USB125703_01762 ruvC; Crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D USB125703_00768 hypothetical protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D USB125703_00907 hypothetical protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D USB125703_01198 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D USB125703_01995 dnaE1; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D USB125703_00731 griR; Beta sliding clamp GriR K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D USB125703_00931 dnaX_1; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D USB125703_00022 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D USB125703_00956 dnaX_2; DNA polymerase III subunit gamma/tau K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D USB125703_01883 polC; DNA polymerase III PolC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D USB125703_01340 Putative bifunctional exonuclease/endonuclease protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D USB125703_01799 priA; putative primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:psev03250]
D USB125703_00752 cypB; Peptidyl-prolyl cis-trans isomerase B K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03272 Virion - Hepatitis viruses
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:psev02010]
D USB125703_00809 sugC; Trehalose import ATP-binding protein SugC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D USB125703_01003 tmpC_1; Membrane lipoprotein TmpC K07335 bmpA; basic membrane protein A and related proteins
D USB125703_01004 tmpC_2; Membrane lipoprotein TmpC K07335 bmpA; basic membrane protein A and related proteins
D USB125703_01006 frcC; Fructose import permease protein FrcC K23535 nupB; general nucleoside transport system permease protein
D USB125703_01007 hypothetical protein K23536 nupC; general nucleoside transport system permease protein
D USB125703_01005 xylG; Xylose import ATP-binding protein XylG K23537 nupA; general nucleoside transport system ATP-binding protein
D USB125703_00323 pstS3; Phosphate-binding protein PstS3 K02040 pstS; phosphate transport system substrate-binding protein
D USB125703_00324 pstC2; Phosphate transport system permease protein PstC 2 K02037 pstC; phosphate transport system permease protein
D USB125703_00325 pstA1; Phosphate transport system permease protein PstA 1 K02038 pstA; phosphate transport system permease protein
D USB125703_00326 pstB1; Phosphate import ATP-binding protein PstB 1 K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D USB125703_01263 yecS; L-cystine transport system permease protein YecS K10036 glnH; glutamine transport system substrate-binding protein
D USB125703_01264 artM; Arginine transport ATP-binding protein ArtM K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]
D USB125703_02105 glnH; ABC transporter glutamine-binding protein GlnH K10005 gluB; glutamate transport system substrate-binding protein
D USB125703_02104 glnM; putative glutamine ABC transporter permease protein GlnM K10006 gluC; glutamate transport system permease protein
D USB125703_02103 glnP; putative glutamine ABC transporter permease protein GlnP K10007 gluD; glutamate transport system permease protein
D USB125703_02106 glnQ; Glutamine transport ATP-binding protein GlnQ K10008 gluA; glutamate transport system ATP-binding protein [EC:7.4.2.1]
D USB125703_00743 metQ; D-methionine-binding lipoprotein MetQ K02073 metQ; D-methionine transport system substrate-binding protein
D USB125703_00745 metI; D-methionine transport system permease protein MetI K02072 metI; D-methionine transport system permease protein
D USB125703_00744 metN2; Methionine import ATP-binding protein MetN 2 K02071 metN; D-methionine transport system ATP-binding protein
D USB125703_01428 gsiA_2; Glutathione import ATP-binding protein GsiA K10823 oppF; oligopeptide transport system ATP-binding protein
D USB125703_01654 putative ABC transporter ATP-binding protein K12372 dppF; dipeptide transport system ATP-binding protein
D USB125703_01871 bioY; Biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component
D USB125703_00155 ykoC_1; Putative HMP/thiamine permease protein YkoC K16785 ecfT; energy-coupling factor transport system permease protein
D USB125703_00407 ykoC_2; Putative HMP/thiamine permease protein YkoC K16785 ecfT; energy-coupling factor transport system permease protein
D USB125703_01052 tagG; Teichoic acid translocation permease protein TagG K09690 wzm; homopolymeric O-antigen transport system permease protein
D USB125703_01053 tagH; Teichoic acids export ATP-binding protein TagH K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D USB125703_00968 hypothetical protein K09694 nodJ; lipooligosaccharide transport system permease protein
D USB125703_00969 hypothetical protein K09694 nodJ; lipooligosaccharide transport system permease protein
D USB125703_00967 drrA; Daunorubicin/doxorubicin resistance ATP-binding protein DrrA K09695 nodI; lipooligosaccharide transport system ATP-binding protein
D USB125703_00107 hypothetical protein K09813 hrtB; hemin transport system permease protein
D USB125703_00106 bceA; Bacitracin export ATP-binding protein BceA K09814 hrtA; hemin transport system ATP-binding protein [EC:7.6.2.-]
D USB125703_01523 ftsX; Cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D USB125703_01522 ftsE; Cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D USB125703_01021 putative ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D USB125703_01022 putative ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D USB125703_00028 putative ABC transporter ATP-binding protein K16014 cydCD; ATP-binding cassette, subfamily C, bacterial CydCD
D USB125703_00029 cydD; ATP-binding/permease protein CydD K16014 cydCD; ATP-binding cassette, subfamily C, bacterial CydCD
C 02060 Phosphotransferase system (PTS) [PATH:psev02060]
D USB125703_00996 ptsI; Phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D USB125703_01012 ulaC; Ascorbate-specific PTS system EIIA component K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D USB125703_00505 fruA; PTS system fructose-specific EIIABC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D USB125703_00506 lacC_1; Tagatose-6-phosphate kinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D USB125703_00919 lacC_2; Tagatose-6-phosphate kinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
C 03070 Bacterial secretion system [PATH:psev03070]
D USB125703_01766 secD; Protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D USB125703_01767 secF; Protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D USB125703_00912 secE; Protein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D USB125703_01851 secG; putative protein-export membrane protein SecG K03075 secG; preprotein translocase subunit SecG
D USB125703_00417 secY; Protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D USB125703_01765 hypothetical protein K03210 yajC; preprotein translocase subunit YajC
D USB125703_00726 yidC; Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D USB125703_01080 secA; Protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D USB125703_01217 ftsY; Signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor
D USB125703_01219 ffh; Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D USB125703_01911 tatA; Sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D USB125703_01441 tatB; Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D USB125703_01912 tatC; Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC
D USB125703_00133 hypothetical protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:psev02020]
D USB125703_00302 senX3; Signal-transduction histidine kinase senX3 K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D USB125703_00301 regX3; Sensory transduction protein regX3 K07776 regX3; two-component system, OmpR family, response regulator RegX3
D USB125703_00323 pstS3; Phosphate-binding protein PstS3 K02040 pstS; phosphate transport system substrate-binding protein
D USB125703_00561 kdpD; Sensor protein KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D USB125703_00560 kdpE; Transcriptional regulatory protein KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D USB125703_00564 kdpA; Potassium-transporting ATPase potassium-binding subunit K01546 kdpA; potassium-transporting ATPase potassium-binding subunit
D USB125703_00563 kdpB; Potassium-transporting ATPase ATP-binding subunit K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6]
D USB125703_00562 kdpC; Potassium-transporting ATPase KdpC subunit K01548 kdpC; potassium-transporting ATPase KdpC subunit
D USB125703_01864 ctaA; Heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9]
D USB125703_00020 degP; Periplasmic serine endoprotease DegP K08372 pepD; putative serine protease PepD [EC:3.4.21.-]
D USB125703_01497 degQ; Periplasmic pH-dependent serine endoprotease DegQ K08372 pepD; putative serine protease PepD [EC:3.4.21.-]
D USB125703_01076 mtrB; Sensor histidine kinase MtrB K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3]
D USB125703_01075 mtrA; DNA-binding response regulator MtrA K07670 mtrA; two-component system, OmpR family, response regulator MtrA
D USB125703_00730 dnaA; Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D USB125703_00816 yodJ_1; Putative carboxypeptidase YodJ K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D USB125703_00818 yodJ_2; Putative carboxypeptidase YodJ K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D USB125703_00782 mcl1; L-malyl-CoA/beta-methylmalyl-CoA lyase K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D USB125703_00949 Putative conjugal transfer protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D USB125703_01510 Putative conjugal transfer protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D USB125703_00950 hypothetical protein K12510 tadB; tight adherence protein B
D USB125703_01511 hypothetical protein K12510 tadB; tight adherence protein B
D USB125703_01512 hypothetical protein K12511 tadC; tight adherence protein C
D USB125703_01705 glnA2; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D USB125703_01707 glnA; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D USB125703_01298 glnT; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D USB125703_02067 dctA2; C4-dicarboxylate transport protein 2 K11103 dctA; aerobic C4-dicarboxylate transport protein
D USB125703_00031 cydA; Cytochrome bd ubiquinol oxidase subunit 1 K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D USB125703_00030 cydB; Cytochrome bd-I ubiquinol oxidase subunit 2 K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D USB125703_00678 ptpA; putative low molecular weight protein-tyrosine-phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:psev02024]
D USB125703_02020 aroH; Phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D USB125703_00560 kdpE; Transcriptional regulatory protein KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D USB125703_01262 gadB; Glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D USB125703_02022 Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D USB125703_00170 fadD_1; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D USB125703_00171 fadD_2; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D USB125703_01428 gsiA_2; Glutathione import ATP-binding protein GsiA K10823 oppF; oligopeptide transport system ATP-binding protein
D USB125703_00071 gsiB; Glutathione-binding protein GsiB K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D USB125703_01424 putative lipoprotein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D USB125703_00072 oppB; Oligopeptide transport system permease protein OppB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D USB125703_01425 dppB; Dipeptide transport system permease protein DppB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D USB125703_00073 gsiD; Glutathione transport system permease protein GsiD K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D USB125703_01426 Putative peptide transport permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D USB125703_00074 gsiA_1; Glutathione import ATP-binding protein GsiA K02031 ddpD; peptide/nickel transport system ATP-binding protein
D USB125703_00726 yidC; Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D USB125703_00912 secE; Protein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D USB125703_01851 secG; putative protein-export membrane protein SecG K03075 secG; preprotein translocase subunit SecG
D USB125703_00417 secY; Protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D USB125703_01765 hypothetical protein K03210 yajC; preprotein translocase subunit YajC
D USB125703_01080 secA; Protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D USB125703_01217 ftsY; Signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor
D USB125703_01219 ffh; Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
C 02040 Flagellar assembly
D USB125703_01716 hrdB; RNA polymerase principal sigma factor HrdB K03086 rpoD; RNA polymerase primary sigma factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:psev01501]
D USB125703_01428 gsiA_2; Glutathione import ATP-binding protein GsiA K10823 oppF; oligopeptide transport system ATP-binding protein
D USB125703_02011 pbpB; Penicillin-binding protein PbpB K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:psev01502]
D USB125703_00721 ddlB; D-alanine--D-alanine ligase B K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D USB125703_01186 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D USB125703_00379 alr; Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D USB125703_02009 murF_2; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D USB125703_02008 mraY; Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D USB125703_02005 murG_2; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D USB125703_00816 yodJ_1; Putative carboxypeptidase YodJ K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D USB125703_00818 yodJ_2; Putative carboxypeptidase YodJ K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
C 01503 Cationic antimicrobial peptide (CAMP) resistance
D USB125703_00752 cypB; Peptidyl-prolyl cis-trans isomerase B K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:psev01000]
C 01001 Protein kinases [BR:psev01001]
D USB125703_02019 spk1; Serine/threonine-protein kinase PK-1 K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D USB125703_00757 pknB; Serine/threonine-protein kinase PknB K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D USB125703_00758 pknA; Serine/threonine-protein kinase PknA K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D USB125703_00302 senX3; Signal-transduction histidine kinase senX3 K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D USB125703_00561 kdpD; Sensor protein KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D USB125703_01076 mtrB; Sensor histidine kinase MtrB K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3]
D USB125703_00284 tcrY; putative sensor histidine kinase TcrY K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D USB125703_01091 pdtaS; putative sensor histidine kinase pdtaS K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:psev01009]
D USB125703_00761 pstP; PP2C-family Ser/Thr phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D USB125703_01878 serB; Phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:psev01002]
D USB125703_01997 lspA_2; Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D USB125703_00144 lspA_1; Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D USB125703_01327 hypothetical protein K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D USB125703_00359 guaA_1; GMP synthase [glutamine-hydrolyzing] K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D USB125703_00959 guaA_2; GMP synthase [glutamine-hydrolyzing] K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D USB125703_00273 iap_2; putative endopeptidase p60 K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D USB125703_00590 purF; Amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D USB125703_01813 gltB; Glutamate synthase [NADPH] large chain K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D USB125703_00381 glmS; Glutamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D USB125703_01416 yfkM; General stress protein 18 K05520 yhbO; deglycase [EC:3.5.1.124]
D USB125703_00550 hypothetical protein K07052 K07052; CAAX protease family protein
D USB125703_00113 pepN; Aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D USB125703_00084 dcp; Dipeptidyl carboxypeptidase K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5]
D USB125703_00787 pepO; Neutral endopeptidase K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D USB125703_00816 yodJ_1; Putative carboxypeptidase YodJ K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D USB125703_00818 yodJ_2; Putative carboxypeptidase YodJ K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D USB125703_01713 pepA; putative cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D USB125703_01436 dapE_1; Putative succinyl-diaminopimelate desuccinylase DapE K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D USB125703_01697 map_2; Methionine aminopeptidase 2 K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D USB125703_00400 map-1; Methionine aminopeptidase 1 K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D USB125703_01228 map_1; Methionine aminopeptidase 1 K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D USB125703_01448 pepPI; Xaa-Pro aminopeptidase 1 K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D USB125703_00538 ftsH_1; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D USB125703_01616 hypothetical protein K24131 prsW; protease PrsW [EC:3.4.-.-]
D USB125703_01617 prsW; Protease PrsW K24131 prsW; protease PrsW [EC:3.4.-.-]
D USB125703_00020 degP; Periplasmic serine endoprotease DegP K08372 pepD; putative serine protease PepD [EC:3.4.21.-]
D USB125703_01497 degQ; Periplasmic pH-dependent serine endoprotease DegQ K08372 pepD; putative serine protease PepD [EC:3.4.21.-]
D USB125703_00963 dac; D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D USB125703_01392 dacB; D-alanyl-D-alanine carboxypeptidase DacB K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D USB125703_00095 clpP2; ATP-dependent Clp protease proteolytic subunit 2 K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D USB125703_00096 clpP1; ATP-dependent Clp protease proteolytic subunit 1 K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D USB125703_01462 ylbL; putative protein YlbL K07177 K07177; Lon-like protease
D USB125703_02119 lexA; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D USB125703_00219 lepB; Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
C 01003 Glycosyltransferases [BR:psev01003]
D USB125703_00986 ppm1; Polyprenol monophosphomannose synthase K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83]
D USB125703_01272 pmt; putative dolichyl-phosphate-mannose--protein mannosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
D USB125703_01001 mgtA; GDP-mannose-dependent alpha-mannosyltransferase K12583 mgtA; phosphatidylinositol alpha 1,6-mannosyltransferase [EC:2.4.1.-]
D USB125703_01880 glgM; Alpha-maltose-1-phosphate synthase K16148 glgM; alpha-maltose-1-phosphate synthase [EC:2.4.1.342]
D USB125703_01575 wecA; Decaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D USB125703_00566 hypothetical protein K14340 K14340; mannosyltransferase [EC:2.4.1.-]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:psev01005]
D USB125703_01041 epsE_1; Putative glycosyltransferase EpsE K12991 rfbG; rhamnosyltransferase [EC:2.4.1.-]
D USB125703_01575 wecA; Decaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:psev01011]
D USB125703_01183 murAA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D USB125703_00900 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D USB125703_02004 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D USB125703_02007 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D USB125703_02010 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D USB125703_00721 ddlB; D-alanine--D-alanine ligase B K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D USB125703_01186 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D USB125703_00379 alr; Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D USB125703_01504 murI; Glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D USB125703_02008 mraY; Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D USB125703_02005 murG_2; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D USB125703_01900 uppP; Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D USB125703_00717 mviN; putative peptidoglycan biosynthesis protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D USB125703_02011 pbpB; Penicillin-binding protein PbpB K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D USB125703_00759 pbpA; Penicillin-binding protein A K05364 pbpA; penicillin-binding protein A
D USB125703_00963 dac; D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D USB125703_01392 dacB; D-alanyl-D-alanine carboxypeptidase DacB K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D USB125703_00816 yodJ_1; Putative carboxypeptidase YodJ K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D USB125703_00818 yodJ_2; Putative carboxypeptidase YodJ K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D USB125703_00273 iap_2; putative endopeptidase p60 K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D USB125703_01778 mltG; Endolytic murein transglycosylase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
C 01004 Lipid biosynthesis proteins [BR:psev01004]
D USB125703_01677 fabD; Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D USB125703_01676 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase 3 K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D USB125703_01674 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D USB125703_01877 fabG1; 3-oxoacyl-[acyl-carrier-protein] reductase FabG1 K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D USB125703_00118 tesB; Acyl-CoA thioesterase 2 K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D USB125703_00012 acsA_1; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D USB125703_00948 acsA_3; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D USB125703_00464 acsA_2; Acetyl-coenzyme A synthetase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D USB125703_02022 Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D USB125703_00170 fadD_1; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D USB125703_00171 fadD_2; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D USB125703_02021 plsC_2; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:psev01006]
D USB125703_02016 hexs-b; Hexaprenyl-diphosphate synthase large subunit ((2E,6E)-farnesyl-diphosphate specific) K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D USB125703_01324 (2Z,6E)-farnesyl diphosphate synthase K12503 uppS; short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68]
D USB125703_01648 Trans,polycis-polyprenyl diphosphate synthase ((2Z,6E)-farnesyl diphosphate specific) K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D USB125703_02124 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D USB125703_00875 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D USB125703_01861 ctaB; Protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:psev01007]
D USB125703_01142 gltX; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D USB125703_02093 tyrS; Tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D USB125703_00988 trpS; Tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D USB125703_00293 cysS; Cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D USB125703_01561 argS; Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D USB125703_01274 metG; Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D USB125703_00065 ileS; Isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D USB125703_00080 valS; Valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D USB125703_00027 leuS; Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D USB125703_00528 lysS1; Lysine--tRNA ligase 1 K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D USB125703_01307 hisS; Histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D USB125703_01649 glyQS; Glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D USB125703_00823 serS; Serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D USB125703_01601 proS; Proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D USB125703_01756 thrS; Threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D USB125703_01776 alaS; Alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D USB125703_02102 pheS; Phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D USB125703_02101 pheT; Phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D USB125703_00906 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D USB125703_01404 dapC; putative N-succinyldiaminopimelate aminotransferase DapC K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
D USB125703_02117 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D USB125703_01489 pat; Putative phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D USB125703_01591 gabT; 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D USB125703_01294 2-aminohexano-6-lactam racemase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D USB125703_02037 ectB; Diaminobutyrate--2-oxoglutarate transaminase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D USB125703_00800 hemL; Glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D USB125703_01135 ilvE_2; Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D USB125703_00275 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00199 Cytochrome P450 [BR:psev00199]
D USB125703_01932 cypC; Fatty-acid peroxygenase K15629 CYP152A; fatty-acid peroxygenase [EC:1.11.2.4]
C 00194 Photosynthesis proteins [BR:psev00194]
D USB125703_01584 atpC; ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D USB125703_01583 atpD; ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D USB125703_01582 atpG; ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D USB125703_01581 atpA; ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D USB125703_01580 atpH; ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D USB125703_01579 atpF; ATP synthase subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D USB125703_01578 atpE; ATP synthase subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D USB125703_01577 atpB; ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:psev03000]
D USB125703_00909 aplIM; Modification methylase AplI K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D USB125703_00507 glcR; HTH-type transcriptional repressor GlcR K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D USB125703_00636 hspR; Putative heat shock protein HspR K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR
D USB125703_00666 zur; Zinc uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D USB125703_00849 arsR; Arsenical resistance operon repressor K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D USB125703_00146 cmtR; HTH-type transcriptional regulator CmtR K21885 cmtR; ArsR family transcriptional regulator, cadmium/lead-responsive transcriptional repressor
D USB125703_01347 ziaR; Transcriptional repressor SmtB K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor
D USB125703_00002 pccR; Propionyl-CoA carboxylase regulator K21686 prpR; XRE family transcriptional regulator, fatty acid utilization regulator
D USB125703_00075 prpR; HTH-type transcriptional regulator PrpR K07110 ramB; XRE family transcriptional regulator, fatty acid utilization regulator
D USB125703_00003 clgR; Transcriptional regulator ClgR K27043 clgR; XRE family transcriptional regulator, stress-response regulator
D USB125703_00274 ideR; Iron-dependent repressor IdeR K26252 dtxR; DtxR family transcriptional regulator, iron-dependent repressor
D USB125703_01028 birA; Bifunctional ligase/repressor BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D USB125703_00337 putA_1; Bifunctional protein PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D USB125703_00806 putA_2; Bifunctional protein PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D USB125703_01062 whiB; Transcriptional regulator WhiB K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D USB125703_01092 whiB1; Transcriptional regulator WhiB1 K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D USB125703_00647 ricR_1; Copper-sensing transcriptional repressor RicR K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D USB125703_01252 ricR_2; Copper-sensing transcriptional repressor RicR K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D USB125703_01136 pmfR; Transcriptional activator PmfR K09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein
D USB125703_00722 parB; putative chromosome-partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D USB125703_00299 carD; RNA polymerase-binding transcription factor CarD K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D USB125703_01634 hrcA; Heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D USB125703_01788 pyrR; Bifunctional protein pyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D USB125703_00908 paiB; Protease synthase and sporulation protein PAI 2 K07734 paiB; transcriptional regulator
D USB125703_01993 nrdR; Transcriptional repressor NrdR K07738 nrdR; transcriptional repressor NrdR
D USB125703_02014 mraZ; Transcriptional regulator MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:psev03021]
D USB125703_00280 hypothetical protein K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
D USB125703_00395 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D USB125703_00453 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D USB125703_00452 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D USB125703_01796 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D USB125703_01716 hrdB; RNA polymerase principal sigma factor HrdB K03086 rpoD; RNA polymerase primary sigma factor
D USB125703_01538 sigH; ECF RNA polymerase sigma factor SigH K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D USB125703_01602 nusA; Transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D USB125703_01787 nusB; Transcription antitermination protein NusB K03625 nusB; transcription antitermination protein NusB
D USB125703_00913 nusG; Transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D USB125703_01319 greA; Transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D USB125703_01567 rho; Transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:psev03019]
D USB125703_01494 ftsH_2; ATP-dependent zinc metalloprotease FtsH K13525 VCP; transitional endoplasmic reticulum ATPase
D USB125703_00061 rne; Ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D USB125703_01206 rnc; Ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3]
D USB125703_00008 rnj; Ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D USB125703_00128 orn; Oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D USB125703_00567 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D USB125703_01622 pnp; Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D USB125703_01567 rho; Transcription termination factor Rho K03628 rho; transcription termination factor Rho
D USB125703_00639 dnaK; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D USB125703_00286 groL1; 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D USB125703_00321 ppk; Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D USB125703_01620 ppk2; Polyphosphate:ADP/GDP phosphotransferase K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D USB125703_00712 cca; CCA-adding enzyme K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D USB125703_01846 Nucleotide-binding protein K06958 rapZ; RNase adapter protein RapZ
D USB125703_01913 helY_2; putative helicase HelY K03727 helY; ATP-dependent RNA helicase HelY [EC:5.6.2.6]
D USB125703_01269 hypothetical protein K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:psev03011]
D USB125703_01832 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D USB125703_00206 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D USB125703_00430 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D USB125703_01773 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D USB125703_00420 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D USB125703_00704 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D USB125703_00442 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D USB125703_00423 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D USB125703_00391 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D USB125703_00437 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D USB125703_00396 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D USB125703_00443 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D USB125703_00397 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D USB125703_00663 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D USB125703_01619 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D USB125703_01221 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D USB125703_00427 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D USB125703_00702 rpsR1; 30S ribosomal protein S18 1 K02963 RP-S18; small subunit ribosomal protein S18
D USB125703_00432 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D USB125703_00018 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D USB125703_00915 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D USB125703_00433 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D USB125703_00436 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D USB125703_00435 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D USB125703_00424 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D USB125703_00422 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D USB125703_00701 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D USB125703_00920 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D USB125703_00914 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D USB125703_00921 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D USB125703_00392 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D USB125703_00426 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D USB125703_00418 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D USB125703_00429 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D USB125703_00394 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D USB125703_00421 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D USB125703_01230 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D USB125703_02108 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D USB125703_00060 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D USB125703_00431 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D USB125703_00434 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D USB125703_00425 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D USB125703_00059 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D USB125703_00665 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D USB125703_00428 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D USB125703_00419 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D USB125703_01882 rpmE2; 50S ribosomal protein L31 type B K02909 RP-L31; large subunit ribosomal protein L31
D USB125703_01205 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D USB125703_00664 rpmG2; 50S ribosomal protein L33 2 K02913 RP-L33; large subunit ribosomal protein L33
D USB125703_00729 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D USB125703_02109 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D USB125703_00398 rpmJ_1; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D USB125703_00896 rpmJ_2; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D USB125703_01300 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D USB125703_02090 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D USB125703_01084 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D USB125703_01082 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D USB125703_02092 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D USB125703_01083 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D USB125703_02091 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:psev03009]
D USB125703_01206 rnc; Ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3]
D USB125703_00128 orn; Oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D USB125703_01494 ftsH_2; ATP-dependent zinc metalloprotease FtsH K13525 VCP; transitional endoplasmic reticulum ATPase
D USB125703_01641 era; GTPase Era K03595 era; GTPase
D USB125703_00058 obg; GTPase Obg K03979 obgE; GTPase [EC:3.6.5.-]
D USB125703_01602 nusA; Transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D USB125703_01787 nusB; Transcription antitermination protein NusB K03625 nusB; transcription antitermination protein NusB
D USB125703_00913 nusG; Transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D USB125703_01276 ksgA; Ribosomal RNA small subunit methyltransferase A K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D USB125703_01801 Putative methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D USB125703_00632 rlmG; Ribosomal RNA large subunit methyltransferase G K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D USB125703_01192 rsmD; Ribosomal RNA small subunit methyltransferase D K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D USB125703_01636 rsmE; Ribosomal RNA small subunit methyltransferase E K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D USB125703_00724 rsmG; Ribosomal RNA small subunit methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D USB125703_02013 rsmH; Ribosomal RNA small subunit methyltransferase H K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D USB125703_01273 rsmI; Ribosomal RNA small subunit methyltransferase I K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D USB125703_02086 tlyA; 16S/23S rRNA (cytidine-2'-O)-methyltransferase TlyA K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D USB125703_00292 putative tRNA/rRNA methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D USB125703_02075 putative RNA pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D USB125703_01996 putative RNA pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D USB125703_00256 speG; Spermidine N(1)-acetyltransferase K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267]
D USB125703_01223 rimM; Ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM
D USB125703_00061 rne; Ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D USB125703_01777 Putative pre-16S rRNA nuclease K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D USB125703_01536 rsgA; Small ribosomal subunit biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D USB125703_02072 der_2; GTPase Der K03977 engA; GTPase
D USB125703_02121 hflX_2; GTPase HflX K03665 hflX; GTPase
D USB125703_01574 Putative threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D USB125703_01768 relA; Bifunctional (p)ppGpp synthase/hydrolase RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D USB125703_01605 rbfA; Ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D USB125703_00054 rsfS; Ribosomal silencing factor RsfS K09710 ybeB; ribosome-associated protein
D USB125703_01639 ybeY; Endoribonuclease YbeY K07042 ybeY; probable rRNA maturation factor
D USB125703_01343 ychF; Ribosome-binding ATPase YchF K06942 ychF; ribosome-binding ATPase
D USB125703_01204 putative protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:psev03016]
D USB125703_01142 gltX; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D USB125703_01601 proS; Proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D USB125703_00065 ileS; Isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D USB125703_00027 leuS; Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D USB125703_01274 metG; Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D USB125703_01561 argS; Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D USB125703_00528 lysS1; Lysine--tRNA ligase 1 K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D USB125703_01776 alaS; Alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D USB125703_01649 glyQS; Glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D USB125703_01756 thrS; Threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D USB125703_00823 serS; Serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D USB125703_00293 cysS; Cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D USB125703_00080 valS; Valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D USB125703_01307 hisS; Histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D USB125703_02102 pheS; Phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D USB125703_02101 pheT; Phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D USB125703_02093 tyrS; Tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D USB125703_00988 trpS; Tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D USB125703_01302 dtd; D-aminoacyl-tRNA deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D USB125703_01637 hinT; Purine nucleoside phosphoramidase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D USB125703_01905 trmI; tRNA (adenine(58)-N(1))-methyltransferase TrmI K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220]
D USB125703_00393 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D USB125703_01608 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D USB125703_00185 iscS; IscS-like cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D USB125703_01574 Putative threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D USB125703_02124 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D USB125703_00728 rnpA; Ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D USB125703_01695 RNaseP_bact_a K01978 rnpB; M1 RNA
D USB125703_01505 rph; Ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D USB125703_01742 rnd; Ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5]
D USB125703_00120 ettA_1; Energy-dependent translational throttle protein EttA K06020 ettA; energy-dependent translational throttle protein EttA
D USB125703_00853 tadA; tRNA-specific adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D USB125703_02125 miaB; tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D USB125703_01226 trmD; tRNA (guanine-N(1)-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D USB125703_02107 aviRb; 23S rRNA (uridine(2479)-2'-O)-methyltransferase K03437 spoU; RNA methyltransferase, TrmH family
D USB125703_00179 mnmA; tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D USB125703_00315 gcvT; Aminomethyltransferase K06980 ygfZ; tRNA-modifying protein YgfZ
D USB125703_00541 tilS; tRNA(Ile)-lysidine synthase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D USB125703_00377 putative protein K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D USB125703_00376 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D USB125703_00378 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D USB125703_01130 tcdA; tRNA threonylcarbamoyladenosine dehydratase K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D USB125703_01622 pnp; Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:psev03012]
D USB125703_01604 infB; Translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D USB125703_02110 infC; Translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D USB125703_00205 tsf; Elongation factor Ts K02357 tsf; elongation factor Ts
D USB125703_00440 tuf; Elongation factor Tu K02358 tuf; elongation factor Tu
D USB125703_00441 fusA; Elongation factor G K02355 fusA; elongation factor G
D USB125703_01568 prfA; Peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D USB125703_00199 frr; Ribosome-recycling factor K02838 frr; ribosome recycling factor
D USB125703_01573 prmC_2; Release factor glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D USB125703_01301 pth; Peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D USB125703_00399 infA; Translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D USB125703_01786 efp; Elongation factor P K02356 efp; elongation factor P
D USB125703_01521 prfB; Peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
C 03110 Chaperones and folding catalysts [BR:psev03110]
D USB125703_00627 clpB; Chaperone protein ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D USB125703_00524 clpC1; ATP-dependent Clp protease ATP-binding subunit ClpC1 K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D USB125703_00093 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D USB125703_00639 dnaK; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D USB125703_00286 groL1; 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D USB125703_00637 dnaJ_1; Chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D USB125703_01635 dnaJ2; Chaperone protein DnaJ 2 K03686 dnaJ; molecular chaperone DnaJ
D USB125703_00638 grpE; Protein GrpE K03687 GRPE; molecular chaperone GrpE
D USB125703_01286 hslR; Heat shock protein 15 K04762 hslR; ribosome-associated heat shock protein Hsp15
D USB125703_00371 groS; 10 kDa chaperonin K04078 groES; chaperonin GroES
D USB125703_00538 ftsH_1; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D USB125703_01577 atpB; ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D USB125703_01201 hypothetical protein K09796 pccA; periplasmic copper chaperone A
D USB125703_00895 strH; Beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D USB125703_00752 cypB; Peptidyl-prolyl cis-trans isomerase B K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D USB125703_01771 ppiB; putative peptidyl-prolyl cis-trans isomerase B K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D USB125703_00237 trxC; Putative thioredoxin 2 K03671 TXN; thioredoxin
D USB125703_00719 trxA; Thioredoxin 1 K03671 TXN; thioredoxin
D USB125703_00189 putative protein K05838 ybbN; putative thioredoxin
C 04131 Membrane trafficking [BR:psev04131]
D USB125703_00062 ndkA; Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D USB125703_01494 ftsH_2; ATP-dependent zinc metalloprotease FtsH K13525 VCP; transitional endoplasmic reticulum ATPase
D USB125703_01848 gap2_1; Glyceraldehyde-3-phosphate dehydrogenase 2 K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D USB125703_02068 gap2_2; Glyceraldehyde-3-phosphate dehydrogenase-like protein K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D USB125703_00312 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D USB125703_01815 pyk_1; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D USB125703_01862 pyk_2; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D USB125703_00643 hypothetical protein K06902 UMF1; MFS transporter, UMF1 family
C 04121 Ubiquitin system
C 03051 Proteasome [BR:psev03051]
D USB125703_01908 pafB; Protein PafB K13572 pafB; proteasome accessory factor B
D USB125703_01909 pafC; Protein PafC K13573 pafC; proteasome accessory factor C
C 03032 DNA replication proteins [BR:psev03032]
D USB125703_01018 rnhA; Ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D USB125703_00909 aplIM; Modification methylase AplI K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D USB125703_00661 hup; DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D USB125703_00730 dnaA; Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D USB125703_00700 dnaB; Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D USB125703_01653 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D USB125703_00122 ssb_1; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D USB125703_00132 ssb1; Single-stranded DNA-binding protein 1 K03111 ssb; single-strand DNA-binding protein
D USB125703_00703 ssb_2; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D USB125703_01995 dnaE1; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D USB125703_00731 griR; Beta sliding clamp GriR K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D USB125703_00022 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D USB125703_00956 dnaX_2; DNA polymerase III subunit gamma/tau K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D USB125703_01883 polC; DNA polymerase III PolC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D USB125703_01340 Putative bifunctional exonuclease/endonuclease protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D USB125703_00931 dnaX_1; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D USB125703_00218 rnhB; Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D USB125703_01825 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D USB125703_00177 ligA; DNA ligase A K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D USB125703_01728 gyrA_2; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D USB125703_00735 gyrA_1; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D USB125703_01719 gyrB_2; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D USB125703_00734 gyrB_1; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D USB125703_00954 topA; DNA topoisomerase 1 K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:psev03036]
D USB125703_00909 aplIM; Modification methylase AplI K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D USB125703_01206 rnc; Ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3]
D USB125703_00043 lsr2; Nucleoid-associated protein Lsr2 K26249 lsr2; nucleoid-associated protein Lsr2
D USB125703_00661 hup; DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D USB125703_00730 dnaA; Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D USB125703_01837 dps; DNA protection during starvation protein K04047 dps; starvation-inducible DNA-binding protein
D USB125703_01213 smc; Chromosome partition protein Smc K03529 smc; chromosome segregation protein
D USB125703_02077 scpA; Segregation and condensation protein A K05896 scpA; segregation and condensation protein A
D USB125703_02076 scpB; Segregation and condensation protein B K06024 scpB; segregation and condensation protein B
D USB125703_01522 ftsE; Cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D USB125703_02011 pbpB; Penicillin-binding protein PbpB K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D USB125703_00007 ftsK; DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D USB125703_01175 essC_1; ESAT-6 secretion machinery protein EssC K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D USB125703_01589 essC_2; ESAT-6 secretion machinery protein EssC K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D USB125703_02003 ftsQ; Cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ
D USB125703_02006 ftsW; putative peptidoglycan glycosyltransferase FtsW K03588 ftsW; cell division protein FtsW
D USB125703_01523 ftsX; Cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D USB125703_02002 ftsZ; Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D USB125703_01748 zapE; Cell division protein ZapE K06916 zapE; cell division protein ZapE
D USB125703_02000 sepF; Cell division protein SepF K09772 sepF; cell division inhibitor SepF
D USB125703_02078 putative protein K03496 parA; chromosome partitioning protein
D USB125703_00723 soj; Sporulation initiation inhibitor protein Soj K03496 parA; chromosome partitioning protein
D USB125703_00722 parB; putative chromosome-partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D USB125703_00724 rsmG; Ribosomal RNA small subunit methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D USB125703_00209 xerC; Tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D USB125703_02081 xerD; Tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D USB125703_01444 mrp; Iron-sulfur cluster carrier protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D USB125703_00498 fic; Adenosine monophosphate-protein transferase SoFic K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D USB125703_01847 whiA; Putative sporulation transcription regulator WhiA K09762 whiA; cell division protein WhiA
C 03400 DNA repair and recombination proteins [BR:psev03400]
D USB125703_00039 ogt; Methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D USB125703_01550 ung; Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D USB125703_02094 Putative 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D USB125703_01606 mutY; Adenine DNA glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D USB125703_00280 hypothetical protein K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
D USB125703_00631 mutX; 8-oxo-dGTP diphosphatase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D USB125703_01733 dut; Deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D USB125703_01502 alkA; putative bifunctional transcriptional activator/DNA repair enzyme AlkA K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D USB125703_01207 fpg1; Formamidopyrimidine-DNA glycosylase 1 K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D USB125703_00103 nei1; Endonuclease 8 1 K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D USB125703_00480 nei; Endonuclease 8 K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D USB125703_00625 xthA; Exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D USB125703_00989 exoA; Exodeoxyribonuclease K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D USB125703_00177 ligA; DNA ligase A K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D USB125703_01825 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D USB125703_01844 uvrA_1; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A
D USB125703_01838 uvrB; UvrABC system protein B K03702 uvrB; excinuclease ABC subunit B
D USB125703_01845 uvrC; UvrABC system protein C K03703 uvrC; excinuclease ABC subunit C
D USB125703_00354 uvrD1; ATP-dependent DNA helicase UvrD1 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D USB125703_01157 pcrA_1; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D USB125703_01456 pcrA_2; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D USB125703_01459 uvrD2; ATP-dependent DNA helicase UvrD2 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D USB125703_00453 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D USB125703_00452 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D USB125703_00395 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D USB125703_01796 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D USB125703_01303 mfd; Transcription-repair-coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D USB125703_01331 xseA; Exodeoxyribonuclease 7 large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D USB125703_01330 xseB; Exodeoxyribonuclease 7 small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D USB125703_01995 dnaE1; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D USB125703_00731 griR; Beta sliding clamp GriR K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D USB125703_00022 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D USB125703_00956 dnaX_2; DNA polymerase III subunit gamma/tau K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D USB125703_01883 polC; DNA polymerase III PolC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D USB125703_01340 Putative bifunctional exonuclease/endonuclease protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D USB125703_00931 dnaX_1; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D USB125703_00122 ssb_1; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D USB125703_00132 ssb1; Single-stranded DNA-binding protein 1 K03111 ssb; single-strand DNA-binding protein
D USB125703_00703 ssb_2; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D USB125703_02128 recA; Protein RecA K03553 recA; recombination protein RecA
D USB125703_01763 ruvA; Holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D USB125703_01764 ruvB; Holliday junction ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D USB125703_01762 ruvC; Crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D USB125703_01799 priA; putative primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D USB125703_00517 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D USB125703_00732 recF_2; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D USB125703_00768 hypothetical protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D USB125703_00907 hypothetical protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D USB125703_01198 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D USB125703_01647 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D USB125703_00932 recR; Recombination protein RecR K06187 recR; recombination protein RecR
D USB125703_02084 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D USB125703_00974 ygbT; CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1
D USB125703_00268 hypothetical protein K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
D USB125703_01728 gyrA_2; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D USB125703_00735 gyrA_1; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D USB125703_01719 gyrB_2; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D USB125703_00734 gyrB_1; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D USB125703_00954 topA; DNA topoisomerase 1 K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D USB125703_00661 hup; DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D USB125703_00567 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D USB125703_00168 dinB; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D USB125703_02119 lexA; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D USB125703_00037 dnaE; DNA polymerase III subunit alpha K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
D USB125703_02127 recX; Regulatory protein RecX K03565 recX; regulatory protein
D USB125703_00479 rhlE_2; ATP-dependent RNA helicase RhlE K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
D USB125703_00322 mutT1; putative 8-oxo-dGTP diphosphatase 1 K23258 mutT1; 8-oxo-(d)GTP phosphatase [EC:3.6.1.69]
D USB125703_02082 act; Methanol dehydrogenase activator K01554 K01554; 8-oxo-dGDP phosphatase [EC:3.6.1.58]
D USB125703_00231 nrdE1; Ribonucleoside-diphosphate reductase subunit alpha 1 K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D USB125703_00230 nrdF2; Ribonucleoside-diphosphate reductase subunit beta nrdF2 K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:psev03029]
D USB125703_01604 infB; Translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D USB125703_02110 infC; Translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D USB125703_00205 tsf; Elongation factor Ts K02357 tsf; elongation factor Ts
D USB125703_00440 tuf; Elongation factor Tu K02358 tuf; elongation factor Tu
D USB125703_00441 fusA; Elongation factor G K02355 fusA; elongation factor G
D USB125703_01641 era; GTPase Era K03595 era; GTPase
D USB125703_02093 tyrS; Tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D USB125703_00027 leuS; Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D USB125703_01649 glyQS; Glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D USB125703_01561 argS; Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D USB125703_00174 gatA; Glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D USB125703_00173 gatB; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D USB125703_00175 gatC; Glutamyl-tRNA(Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D USB125703_00122 ssb_1; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D USB125703_00132 ssb1; Single-stranded DNA-binding protein 1 K03111 ssb; single-strand DNA-binding protein
D USB125703_00703 ssb_2; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D USB125703_00639 dnaK; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D USB125703_00638 grpE; Protein GrpE K03687 GRPE; molecular chaperone GrpE
D USB125703_00286 groL1; 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D USB125703_00371 groS; 10 kDa chaperonin K04078 groES; chaperonin GroES
D USB125703_00637 dnaJ_1; Chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D USB125703_01635 dnaJ2; Chaperone protein DnaJ 2 K03686 dnaJ; molecular chaperone DnaJ
D USB125703_00185 iscS; IscS-like cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D USB125703_01444 mrp; Iron-sulfur cluster carrier protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D USB125703_01861 ctaB; Protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D USB125703_01864 ctaA; Heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9]
D USB125703_00726 yidC; Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:psev02000]
D USB125703_01021 putative ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D USB125703_01022 putative ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D USB125703_00183 Putative multidrug export ATP-binding/permease protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D USB125703_01128 putative ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D USB125703_00028 putative ABC transporter ATP-binding protein K16014 cydCD; ATP-binding cassette, subfamily C, bacterial CydCD
D USB125703_00029 cydD; ATP-binding/permease protein CydD K16014 cydCD; ATP-binding cassette, subfamily C, bacterial CydCD
D USB125703_01285 ettA_2; Energy-dependent translational throttle protein EttA K15738 uup; ABC transport system ATP-binding/permease protein
D USB125703_00618 ribY; Riboflavin-binding protein RibY K24985 ribY; putative riboflavin transport system substrate-binding protein
D USB125703_00619 ribX; Riboflavin transport system permease protein RibX K24986 ribX; putative riboflavin transport system permease protein
D USB125703_00809 sugC; Trehalose import ATP-binding protein SugC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D USB125703_01003 tmpC_1; Membrane lipoprotein TmpC K07335 bmpA; basic membrane protein A and related proteins
D USB125703_01004 tmpC_2; Membrane lipoprotein TmpC K07335 bmpA; basic membrane protein A and related proteins
D USB125703_01006 frcC; Fructose import permease protein FrcC K23535 nupB; general nucleoside transport system permease protein
D USB125703_01007 hypothetical protein K23536 nupC; general nucleoside transport system permease protein
D USB125703_01005 xylG; Xylose import ATP-binding protein XylG K23537 nupA; general nucleoside transport system ATP-binding protein
D USB125703_01211 fetB; putative iron export permease protein FetB K02069 STAR2; UDP-glucose/iron transport system permease protein
D USB125703_00709 putative ABC transporter-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D USB125703_00711 ugpA; sn-glycerol-3-phosphate transport system permease protein UgpA K02025 ABC.MS.P; multiple sugar transport system permease protein
D USB125703_00710 araQ; L-arabinose transport system permease protein AraQ K02026 ABC.MS.P1; multiple sugar transport system permease protein
D USB125703_00323 pstS3; Phosphate-binding protein PstS3 K02040 pstS; phosphate transport system substrate-binding protein
D USB125703_00324 pstC2; Phosphate transport system permease protein PstC 2 K02037 pstC; phosphate transport system permease protein
D USB125703_00325 pstA1; Phosphate transport system permease protein PstA 1 K02038 pstA; phosphate transport system permease protein
D USB125703_00326 pstB1; Phosphate import ATP-binding protein PstB 1 K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D USB125703_01263 yecS; L-cystine transport system permease protein YecS K10036 glnH; glutamine transport system substrate-binding protein
D USB125703_01264 artM; Arginine transport ATP-binding protein ArtM K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]
D USB125703_02105 glnH; ABC transporter glutamine-binding protein GlnH K10005 gluB; glutamate transport system substrate-binding protein
D USB125703_02104 glnM; putative glutamine ABC transporter permease protein GlnM K10006 gluC; glutamate transport system permease protein
D USB125703_02103 glnP; putative glutamine ABC transporter permease protein GlnP K10007 gluD; glutamate transport system permease protein
D USB125703_02106 glnQ; Glutamine transport ATP-binding protein GlnQ K10008 gluA; glutamate transport system ATP-binding protein [EC:7.4.2.1]
D USB125703_00743 metQ; D-methionine-binding lipoprotein MetQ K02073 metQ; D-methionine transport system substrate-binding protein
D USB125703_00745 metI; D-methionine transport system permease protein MetI K02072 metI; D-methionine transport system permease protein
D USB125703_00744 metN2; Methionine import ATP-binding protein MetN 2 K02071 metN; D-methionine transport system ATP-binding protein
D USB125703_01490 hypothetical protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein
D USB125703_01491 hypothetical protein K05832 K05832; putative tryptophan/tyrosine transport system permease protein
D USB125703_01492 cmpC; Bicarbonate transport ATP-binding protein CmpC K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein
D USB125703_01428 gsiA_2; Glutathione import ATP-binding protein GsiA K10823 oppF; oligopeptide transport system ATP-binding protein
D USB125703_01654 putative ABC transporter ATP-binding protein K12372 dppF; dipeptide transport system ATP-binding protein
D USB125703_00071 gsiB; Glutathione-binding protein GsiB K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D USB125703_01424 putative lipoprotein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D USB125703_00072 oppB; Oligopeptide transport system permease protein OppB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D USB125703_01425 dppB; Dipeptide transport system permease protein DppB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D USB125703_00073 gsiD; Glutathione transport system permease protein GsiD K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D USB125703_01426 Putative peptide transport permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D USB125703_00074 gsiA_1; Glutathione import ATP-binding protein GsiA K02031 ddpD; peptide/nickel transport system ATP-binding protein
D USB125703_01816 yclQ; putative ABC transporter solute-binding protein YclQ K25282 yclQ; iron-siderophore transport system substrate-binding protein
D USB125703_01818 fatC; Ferric-anguibactin transport system permease protein FatC K25283 yclO; iron-siderophore transport system permease protein
D USB125703_01817 fatD; Ferric-anguibactin transport system permease protein FatD K25284 yclN; iron-siderophore transport system permease protein
D USB125703_01819 fepC; Ferric enterobactin transport ATP-binding protein FepC K25285 yclP; iron-siderophore transport system ATP-binding protein [EC:7.2.2.-]
D USB125703_01881 ylmA; putative ABC transporter ATP-binding protein YlmA K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D USB125703_00667 mntB_1; Manganese transport system membrane protein MntB K09819 ABC.MN.P; manganese/iron transport system permease protein
D USB125703_01871 bioY; Biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component
D USB125703_00410 ykoF; Putative HMP/thiamine-binding protein YkoF K24620 ykoF; energy-coupling factor transport system substrate-specific component
D USB125703_00155 ykoC_1; Putative HMP/thiamine permease protein YkoC K16785 ecfT; energy-coupling factor transport system permease protein
D USB125703_00407 ykoC_2; Putative HMP/thiamine permease protein YkoC K16785 ecfT; energy-coupling factor transport system permease protein
D USB125703_00156 ykoD_1; Putative HMP/thiamine import ATP-binding protein YkoD K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D USB125703_00408 ykoD_2; Putative HMP/thiamine import ATP-binding protein YkoD K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D USB125703_00157 ykoE_1; Putative HMP/thiamine permease protein YkoE K16925 ykoE; energy-coupling factor transport system permease protein
D USB125703_00409 ykoE_2; Putative HMP/thiamine permease protein YkoE K16925 ykoE; energy-coupling factor transport system permease protein
D USB125703_00668 mntB_2; Manganese transport system membrane protein MntB K02075 ABC.ZM.P; zinc/manganese transport system permease protein
D USB125703_01256 znuB; High-affinity zinc uptake system membrane protein ZnuB K02075 ABC.ZM.P; zinc/manganese transport system permease protein
D USB125703_00669 putative ABC transporter ATP-binding protein K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein
D USB125703_01255 znuC; Zinc import ATP-binding protein ZnuC K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein
D USB125703_01052 tagG; Teichoic acid translocation permease protein TagG K09690 wzm; homopolymeric O-antigen transport system permease protein
D USB125703_01053 tagH; Teichoic acids export ATP-binding protein TagH K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D USB125703_00968 hypothetical protein K09694 nodJ; lipooligosaccharide transport system permease protein
D USB125703_00969 hypothetical protein K09694 nodJ; lipooligosaccharide transport system permease protein
D USB125703_00967 drrA; Daunorubicin/doxorubicin resistance ATP-binding protein DrrA K09695 nodI; lipooligosaccharide transport system ATP-binding protein
D USB125703_00107 hypothetical protein K09813 hrtB; hemin transport system permease protein
D USB125703_00106 bceA; Bacitracin export ATP-binding protein BceA K09814 hrtA; hemin transport system ATP-binding protein [EC:7.6.2.-]
D USB125703_01523 ftsX; Cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D USB125703_01522 ftsE; Cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D USB125703_00573 yhaP; putative protein YhaP K01992 ABC-2.P; ABC-2 type transport system permease protein
D USB125703_00903 ybhR; putative multidrug ABC transporter permease YbhR K01992 ABC-2.P; ABC-2 type transport system permease protein
D USB125703_01500 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D USB125703_00574 yxlF_1; putative ABC transporter ATP-binding protein YxlF K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D USB125703_00904 ybhF; putative multidrug ABC transporter ATP-binding protein YbhF K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D USB125703_01499 yxlF_2; putative ABC transporter ATP-binding protein YxlF K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D USB125703_00705 ytrF; ABC transporter permease YtrF K02004 ABC.CD.P; putative ABC transport system permease protein
D USB125703_01644 putative ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D USB125703_01868 sufC; Vegetative protein 296 K09013 sufC; Fe-S cluster assembly ATP-binding protein
D USB125703_00786 mdtK; Multidrug resistance protein MdtK K26937 dinF; MATE family, multidrug efflux pump
D USB125703_02036 kgtP_2; Alpha-ketoglutarate permease K03761 kgtP; MFS transporter, MHS family, alpha-ketoglutarate permease
D USB125703_00459 kgtP_1; Alpha-ketoglutarate permease K03761 kgtP; MFS transporter, MHS family, alpha-ketoglutarate permease
D USB125703_01942 proP_3; Proline/betaine transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D USB125703_01403 proP_2; Proline/betaine transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D USB125703_00339 sotB; Sugar efflux transporter B K08159 sotB; MFS transporter, DHA1 family, L-arabinose/isopropyl-beta-D-thiogalactopyranoside export protein
D USB125703_00495 qacA_1; Antiseptic resistance protein K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein
D USB125703_00838 ynfM; Inner membrane transport protein YnfM K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein
D USB125703_00643 hypothetical protein K06902 UMF1; MFS transporter, UMF1 family
D USB125703_00996 ptsI; Phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D USB125703_00505 fruA; PTS system fructose-specific EIIABC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D USB125703_01012 ulaC; Ascorbate-specific PTS system EIIA component K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D USB125703_01973 dhaM; Protein-lysine deacetylase K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121]
D USB125703_01976 glpF; putative glycerol uptake facilitator protein K02440 glpF; glycerol uptake facilitator
D USB125703_01529 kcsA; pH-gated potassium channel KcsA K10716 kch; voltage-gated potassium channel
D USB125703_01749 amtB; Ammonia channel K03320 amt; ammonium transporter, Amt family
D USB125703_01470 hypothetical protein K07114 yfbK; Ca-activated chloride channel homolog
D USB125703_00260 mscL; Large-conductance mechanosensitive channel K03282 mscL; large conductance mechanosensitive channel
D USB125703_00114 ykuT; putative MscS family protein YkuT K22044 ybiO; moderate conductance mechanosensitive channel
D USB125703_01122 corA; Cobalt/magnesium transport protein CorA K03284 corA; magnesium transporter
D USB125703_00583 crcB_1; Putative fluoride ion transporter CrcB K06199 crcB; fluoride exporter
D USB125703_00584 crcB_2; Putative fluoride ion transporter CrcB K06199 crcB; fluoride exporter
D USB125703_01640 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D USB125703_01543 putative protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D USB125703_01542 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D USB125703_01176 gabP_1; GABA permease K11735 gabP; GABA permease
D USB125703_01348 czcD; Metal cation efflux system protein CzcD K16264 czcD; cobalt-zinc-cadmium efflux system protein
D USB125703_00306 nepA; Nicotine metabolites export pump subunit NepA K03297 emrE; small multidrug resistance pump
D USB125703_00307 ebrB; Multidrug resistance protein EbrB K03297 emrE; small multidrug resistance pump
D USB125703_01162 Multidrug transporter K03297 emrE; small multidrug resistance pump
D USB125703_01163 mdtJ; Spermidine export protein MdtJ K03297 emrE; small multidrug resistance pump
D USB125703_01534 yijE; putative cystine transporter YijE K15269 pecM; probable blue pigment (indigoidine) exporter
D USB125703_01690 rhtA; Threonine/homoserine exporter RhtA K11939 rhtA; inner membrane transporter RhtA
D USB125703_00369 rarD_1; Protein RarD K05786 rarD; chloramphenicol-sensitive protein RarD
D USB125703_00370 rarD_2; Protein RarD K05786 rarD; chloramphenicol-sensitive protein RarD
D USB125703_00249 lutP; L-lactate permease K03303 lutP; lactate permease
D USB125703_01936 chaA; Sodium-potassium/proton antiporter ChaA K07300 chaA; Ca2+:H+ antiporter
D USB125703_00746 mctC; Monocarboxylic acid transporter K14393 actP; cation/acetate symporter
D USB125703_02067 dctA2; C4-dicarboxylate transport protein 2 K11103 dctA; aerobic C4-dicarboxylate transport protein
D USB125703_00862 nhaA; Na(+)/H(+) antiporter NhaA K03313 nhaA; Na+:H+ antiporter, NhaA family
D USB125703_00653 ktrB_1; Ktr system potassium uptake protein B K03498 trkH; trk/ktr system potassium uptake protein
D USB125703_00859 ktrB_2; Ktr system potassium uptake protein B K03498 trkH; trk/ktr system potassium uptake protein
D USB125703_00652 ktrA_1; Ktr system potassium uptake protein A K03499 trkA; trk/ktr system potassium uptake protein
D USB125703_00858 ktrA_2; Ktr system potassium uptake protein A K03499 trkA; trk/ktr system potassium uptake protein
D USB125703_01963 pbuG; Guanine/hypoxanthine permease PbuG K06901 pbuG; adenine/guanine/hypoxanthine permease
D USB125703_00330 mntH; Divalent metal cation transporter MntH K03322 mntH; manganese transport protein
D USB125703_00717 mviN; putative peptidoglycan biosynthesis protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D USB125703_00042 hypothetical protein K13936 mdcF; malonate transporter and related proteins
D USB125703_01938 kup; Low affinity potassium transport system protein kup K03549 kup; KUP system potassium uptake protein
D USB125703_01720 hypothetical protein K26605 azlC; branched chain amino acid efflux pump
D USB125703_01721 hypothetical protein K26606 azlD; branched chain amino acid efflux pump
D USB125703_00651 hypothetical protein K22736 VIT; vacuolar iron transporter family protein
D USB125703_01509 hypothetical protein K22736 VIT; vacuolar iron transporter family protein
D USB125703_02006 ftsW; putative peptidoglycan glycosyltransferase FtsW K03588 ftsW; cell division protein FtsW
D USB125703_00558 efeU; Ferrous iron permease EfeU K07243 FTR; high-affinity iron transporter
D USB125703_00557 efeO; Iron uptake system component EfeO K07224 efeO; iron uptake system component EfeO
D USB125703_00556 efeN_1; putative deferrochelatase/peroxidase EfeN K16301 efeB; deferrochelatase/peroxidase EfeB [EC:1.11.1.-]
D USB125703_00868 dsbD; Thiol:disulfide interchange protein DsbD K06196 ccdA; cytochrome c-type biogenesis protein
D USB125703_01398 feoB; Fe(2+) transporter FeoB K04759 feoB; ferrous iron transport protein B
C 02044 Secretion system [BR:psev02044]
D USB125703_01327 hypothetical protein K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D USB125703_00949 Putative conjugal transfer protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D USB125703_01510 Putative conjugal transfer protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D USB125703_00950 hypothetical protein K12510 tadB; tight adherence protein B
D USB125703_01511 hypothetical protein K12510 tadB; tight adherence protein B
D USB125703_01512 hypothetical protein K12511 tadC; tight adherence protein C
D USB125703_01999 hypothetical protein K02221 yggT; YggT family protein
D USB125703_00026 comEA; ComE operon protein 1 K02237 comEA; competence protein ComEA
D USB125703_00025 comEC; ComE operon protein 3 K02238 comEC; competence protein ComEC
D USB125703_00133 hypothetical protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D USB125703_01080 secA; Protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D USB125703_01766 secD; Protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D USB125703_00912 secE; Protein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D USB125703_01767 secF; Protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D USB125703_01851 secG; putative protein-export membrane protein SecG K03075 secG; preprotein translocase subunit SecG
D USB125703_00417 secY; Protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D USB125703_01219 ffh; Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D USB125703_01217 ftsY; Signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor
D USB125703_01765 hypothetical protein K03210 yajC; preprotein translocase subunit YajC
D USB125703_00726 yidC; Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D USB125703_01911 tatA; Sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D USB125703_01441 tatB; Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D USB125703_01912 tatC; Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:psev02042]
D USB125703_01640 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D USB125703_01543 putative protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D USB125703_01542 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D USB125703_01323 hypothetical protein K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:psev02022]
D USB125703_00302 senX3; Signal-transduction histidine kinase senX3 K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D USB125703_00301 regX3; Sensory transduction protein regX3 K07776 regX3; two-component system, OmpR family, response regulator RegX3
D USB125703_00561 kdpD; Sensor protein KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D USB125703_00560 kdpE; Transcriptional regulatory protein KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D USB125703_01076 mtrB; Sensor histidine kinase MtrB K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3]
D USB125703_01075 mtrA; DNA-binding response regulator MtrA K07670 mtrA; two-component system, OmpR family, response regulator MtrA
D USB125703_00284 tcrY; putative sensor histidine kinase TcrY K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D USB125703_00283 tcrX; putative transcriptional regulatory protein TcrX K02483 K02483; two-component system, OmpR family, response regulator
D USB125703_01091 pdtaS; putative sensor histidine kinase pdtaS K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3]
D USB125703_01823 pdtaR; putative transcriptional regulatory protein pdtaR K22010 pdtaR; two-component system, response regulator PdtaR
C 02035 Bacterial motility proteins [BR:psev02035]
D USB125703_01327 hypothetical protein K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D USB125703_00949 Putative conjugal transfer protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D USB125703_01510 Putative conjugal transfer protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:psev04812]
D USB125703_01410 hypothetical protein K06990 MEMO1; MEMO1 family protein
D USB125703_02002 ftsZ; Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D USB125703_02078 putative protein K03496 parA; chromosome partitioning protein
D USB125703_00723 soj; Sporulation initiation inhibitor protein Soj K03496 parA; chromosome partitioning protein
D USB125703_00722 parB; putative chromosome-partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:psev04147]
D USB125703_01848 gap2_1; Glyceraldehyde-3-phosphate dehydrogenase 2 K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D USB125703_02068 gap2_2; Glyceraldehyde-3-phosphate dehydrogenase-like protein K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D USB125703_01849 pgk; Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D USB125703_01815 pyk_1; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D USB125703_01862 pyk_2; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D USB125703_00752 cypB; Peptidyl-prolyl cis-trans isomerase B K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D USB125703_00286 groL1; 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D USB125703_00639 dnaK; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D USB125703_01858 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D USB125703_00368 guaB; Inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D USB125703_00440 tuf; Elongation factor Tu K02358 tuf; elongation factor Tu
D USB125703_01494 ftsH_2; ATP-dependent zinc metalloprotease FtsH K13525 VCP; transitional endoplasmic reticulum ATPase
D USB125703_01637 hinT; Purine nucleoside phosphoramidase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D USB125703_00805 ldh2; L-lactate dehydrogenase 2 K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D USB125703_02022 Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D USB125703_00170 fadD_1; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D USB125703_00171 fadD_2; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D USB125703_00416 adk; Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D USB125703_01682 apt; Adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D USB125703_02095 argH; Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D USB125703_02096 argG; Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D USB125703_00347 N(G),N(G)-dimethylarginine dimethylaminohydrolase K01482 DDAH; dimethylargininase [EC:3.5.3.18]
D USB125703_00333 galK; Galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D USB125703_00188 glgB; 1,4-alpha-glucan branching enzyme GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D USB125703_01977 glpK; Glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D USB125703_01705 glnA2; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D USB125703_01707 glnA; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D USB125703_01298 glnT; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D USB125703_00799 hemB; Delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D USB125703_01922 hypothetical protein K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D USB125703_00779 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D USB125703_00348 purH; Bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D USB125703_01712 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D USB125703_01857 zwf2; Glucose-6-phosphate 1-dehydrogenase 2 K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D USB125703_01850 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D USB125703_00312 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:psev02048]
D USB125703_00974 ygbT; CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1
D USB125703_00973 ygbF; CRISPR-associated endoribonuclease Cas2 K09951 cas2; CRISPR-associated protein Cas2
D USB125703_00979 cse1; CRISPR-associated protein CasA/Cse1 K19123 casA; CRISPR system Cascade subunit CasA
D USB125703_00980 cas3; CRISPR-associated nuclease/helicase Cas3 K19123 casA; CRISPR system Cascade subunit CasA
D USB125703_00978 hypothetical protein K19046 casB; CRISPR system Cascade subunit CasB
D USB125703_00977 casC; CRISPR system Cascade subunit CasC K19124 casC; CRISPR system Cascade subunit CasC
D USB125703_00976 casD; CRISPR system Cascade subunit CasD K19125 casD; CRISPR system Cascade subunit CasD
D USB125703_00975 cse3; CRISPR-associated endoribonuclease Cse3 K19126 casE; CRISPR system Cascade subunit CasE
D USB125703_00047 hsdR_1; Type I restriction enzyme EcoR124II R protein K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D USB125703_00773 radD_1; Putative DNA repair helicase RadD K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D USB125703_01376 hsdR_2; Type I restriction enzyme EcoR124II R protein K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D USB125703_00049 hypothetical protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D USB125703_00771 hsdS; Type-1 restriction enzyme EcoKI specificity protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D USB125703_01375 hypothetical protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D USB125703_00050 putative type I restriction enzymeP M protein K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D USB125703_00770 putative type I restriction enzymeP M protein K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D USB125703_01374 hsdM; Type I restriction enzyme EcoKI M protein K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D USB125703_00909 aplIM; Modification methylase AplI K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D USB125703_01689 hypothetical protein K01156 res; type III restriction enzyme [EC:3.1.21.5]
D USB125703_01688 mboIIM; Modification methylase MboII K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D USB125703_02058 hypothetical protein K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]
D USB125703_00772 mrr; Mrr restriction system protein K07448 mrr; restriction system protein
D USB125703_01346 fitB; Toxin FitB K07062 fitB; toxin FitB [EC:3.1.-.-]
D USB125703_00833 hypothetical protein K21495 fitA; antitoxin FitA
D USB125703_01345 hypothetical protein K21495 fitA; antitoxin FitA
D USB125703_02002 ftsZ; Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D USB125703_01142 gltX; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D USB125703_00185 iscS; IscS-like cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:psev01504]
D USB125703_00495 qacA_1; Antiseptic resistance protein K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein
D USB125703_00816 yodJ_1; Putative carboxypeptidase YodJ K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D USB125703_00818 yodJ_2; Putative carboxypeptidase YodJ K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:psev03100]
D USB125703_00252 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D USB125703_00052 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D USB125703_00739 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D USB125703_01558 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D USB125703_00265 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D USB125703_00839 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D USB125703_00126 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D USB125703_01656 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D USB125703_00546 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D USB125703_01753 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D USB125703_01955 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D USB125703_01288 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D USB125703_01144 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D USB125703_00545 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D USB125703_01165 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D USB125703_01752 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D USB125703_00656 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D USB125703_00101 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D USB125703_00129 tRNA-His K14226 tRNA-His; tRNA His
D USB125703_00737 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D USB125703_01898 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D USB125703_00765 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D USB125703_01508 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D USB125703_01820 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D USB125703_00329 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D USB125703_01095 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D USB125703_01667 tRNA-Met K14230 tRNA-Met; tRNA Met
D USB125703_01464 tRNA-Met K14230 tRNA-Met; tRNA Met
D USB125703_00892 tRNA-Met K14230 tRNA-Met; tRNA Met
D USB125703_00547 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D USB125703_02064 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D USB125703_00943 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D USB125703_00099 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D USB125703_00827 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D USB125703_00825 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D USB125703_00925 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D USB125703_00515 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D USB125703_00958 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D USB125703_00891 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D USB125703_00291 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D USB125703_00911 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D USB125703_00888 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D USB125703_01684 tRNA-Val K14237 tRNA-Val; tRNA Val
D USB125703_01754 tRNA-Val K14237 tRNA-Val; tRNA Val
D USB125703_01956 tRNA-Val K14237 tRNA-Val; tRNA Val
D USB125703_01751 tRNA-Val K14237 tRNA-Val; tRNA Val
D USB125703_01082 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D USB125703_02092 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D USB125703_01083 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D USB125703_02091 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D USB125703_02090 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D USB125703_01084 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D USB125703_00928 Bacteria_small_SRP K01983 ffs; SRP RNA
D USB125703_01695 RNaseP_bact_a K01978 rnpB; M1 RNA
D USB125703_01528 tmRNA K15035 ssrA; transfer-messenger RNA
D USB125703_01527 ssrA; transfer-messenger RNA, SsrA K15035 ssrA; transfer-messenger RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D USB125703_00388 S-(hydroxymethyl)mycothiol dehydrogenase K00153 E1.1.1.306; S-(hydroxymethyl)mycothiol dehydrogenase [EC:1.1.1.306]
D USB125703_01270 dkgA; 2,5-diketo-D-gluconic acid reductase A K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D USB125703_00603 L-gulono-1,4-lactone dehydrogenase K05888 K05888; L-gulono-1,4-lactone dehydrogenase [EC:1.1.2.-]
D USB125703_01108 L-gulono-1,4-lactone dehydrogenase K05888 K05888; L-gulono-1,4-lactone dehydrogenase [EC:1.1.2.-]
D USB125703_01015 lpdA; NAD(P)H dehydrogenase (quinone) K23842 lpdA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D USB125703_02024 mtr; Mycothione reductase K17883 mtr; mycothione reductase [EC:1.8.1.15]
D USB125703_00123 msrAB; Peptide methionine sulfoxide reductase MsrA/MsrB K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D USB125703_00289 msrB; Peptide methionine sulfoxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D USB125703_01202 efeN_2; putative deferrochelatase/peroxidase EfeN K15733 E1.11.1.19; dye decolorizing peroxidase [EC:1.11.1.19]
D USB125703_01094 bcp; Putative peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D USB125703_00608 ohrB; Organic hydroperoxide resistance protein OhrB K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D USB125703_01680 ahpE; Alkyl hydroperoxide reductase E K24120 ahpE; mycoredoxin-dependent peroxiredoxin [EC:1.11.1.29]
D USB125703_01926 mhuD; Heme-degrading monooxygenase HmoB K21481 mhuD; heme oxygenase (mycobilin-producing) [EC:1.14.99.57]
D USB125703_01388 merA; Mercuric reductase K00520 merA; mercuric reductase [EC:1.16.1.1]
D USB125703_00883 fprA; NADPH-ferredoxin reductase FprA K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D USB125703_01409 pflA; Pyruvate formate-lyase 1-activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D USB125703_01308 lacA; Galactoside O-acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79]
D USB125703_00320 mshD_1; Mycothiol acetyltransferase K15520 mshD; mycothiol synthase [EC:2.3.1.189]
D USB125703_01914 lnt; Apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D USB125703_01812 lgt; Prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D USB125703_01706 glnE; Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D USB125703_01930 hypothetical protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108]
D USB125703_00671 arsC1; Arsenate-mycothiol transferase ArsC1 K18701 arsC; arsenate-mycothiol transferase [EC:2.8.4.2]
D USB125703_00119 hypothetical protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D USB125703_00589 hypothetical protein K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D USB125703_01450 3',5'-nucleoside bisphosphate phosphatase K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D USB125703_00835 dtd3; D-aminoacyl-tRNA deacylase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D USB125703_01129 yjjV; putative metal-dependent hydrolase YjjV K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D USB125703_01275 tatD; putative metal-dependent hydrolase TatD K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D USB125703_00785 nucS; Endonuclease NucS K07503 nucS; endonuclease [EC:3.1.-.-]
D USB125703_01658 def_1; Peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D USB125703_02023 def_2; Peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D USB125703_00788 pdaA; Peptidoglycan-N-acetylmuramic acid deacetylase PdaA K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D USB125703_01311 pdaC; Peptidoglycan-N-acetylmuramic acid deacetylase PdaC K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D USB125703_01321 mca; Mycothiol S-conjugate amidase K18455 mca; mycothiol S-conjugate amidase [EC:3.5.1.115]
D USB125703_01496 ybeM; Deaminated glutathione amidase K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128]
D USB125703_01071 ravA_1; ATPase RavA K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D USB125703_01172 ravA_2; ATPase RavA K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D USB125703_01195 hypothetical protein K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D USB125703_01595 hypothetical protein K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D USB125703_01544 nnr; Bifunctional NAD(P)H-hydrate repair enzyme Nnr K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D USB125703_01901 mshC; L-cysteine:1D-myo-inositol 2-amino-2-deoxy-alpha-D-glucopyranoside ligase K15526 mshC; L-cysteine:1D-myo-inositol 2-amino-2-deoxy-alpha-D-glucopyranoside ligase [EC:6.3.1.13]
D USB125703_01251 copB; Copper-exporting P-type ATPase B K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D USB125703_02112 ctpE; putative cation-transporting ATPase E K12952 ctpE; cation-transporting P-type ATPase E [EC:7.2.2.-]
D USB125703_00145 ctpG; putative cation-transporting ATPase G K12954 ctpG; cation-transporting P-type ATPase G [EC:7.2.2.-]
C 99981 Carbohydrate metabolism
D USB125703_00248 lutA_1; Lactate utilization protein A K18928 lldE; L-lactate dehydrogenase complex protein LldE
D USB125703_01367 lutA_2; Lactate utilization protein A K18928 lldE; L-lactate dehydrogenase complex protein LldE
D USB125703_00247 lutB_1; Lactate utilization protein B K18929 lldF; L-lactate dehydrogenase complex protein LldF
D USB125703_01368 lutB_2; Lactate utilization protein B K18929 lldF; L-lactate dehydrogenase complex protein LldF
D USB125703_00246 lutC_1; Lactate utilization protein C K00782 lldG; L-lactate dehydrogenase complex protein LldG
D USB125703_01369 lutC_2; Lactate utilization protein C K00782 lldG; L-lactate dehydrogenase complex protein LldG
C 99982 Energy metabolism
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
D USB125703_00232 nrdI; Protein NrdI K03647 nrdI; protein involved in ribonucleotide reduction
C 99985 Amino acid metabolism
D USB125703_02001 yggS; Pyridoxal phosphate homeostasis protein K06997 yggS; PLP dependent protein
D USB125703_01872 hypothetical protein K21700 bauB; beta-alanine degradation protein BauB
D USB125703_00609 hypothetical protein K22479 argA; N-acetyltransferase
C 99986 Glycan metabolism
C 99987 Cofactor metabolism
C 99988 Secondary metabolism
C 99999 Others
D USB125703_00476 hypothetical protein K06999 K06999; phospholipase/carboxylesterase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D USB125703_02034 cspA; Cold shock protein CspA K03704 cspA; cold shock protein
D USB125703_00277 csp; Cold shock-like protein K03704 cspA; cold shock protein
C 99974 Translation
D USB125703_00090 Ribonuclease K07576 K07576; metallo-beta-lactamase family protein
C 99975 Protein processing
D USB125703_00098 tig; Trigger factor K03545 tig; trigger factor
D USB125703_01524 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein
D USB125703_00233 nrdH; Glutaredoxin-like protein NrdH K06191 nrdH; glutaredoxin-like protein NrdH
D USB125703_00211 comM; Competence protein ComM K07391 comM; magnesium chelatase family protein
D USB125703_00869 ccs1; Cytochrome c biogenesis protein Ccs1 K07399 resB; cytochrome c biogenesis protein
C 99976 Replication and repair
D USB125703_01339 hypothetical protein K09760 rmuC; DNA recombination protein RmuC
D USB125703_01154 hypothetical protein K07459 ybjD; putative ATP-dependent endonuclease of the OLD family
D USB125703_00212 hypothetical protein K07460 yraN; putative endonuclease
D USB125703_00210 dprA; Putative DNA processing protein DprA K04096 smf; DNA processing protein
D USB125703_01772 putative AAA domain-containing protein K07478 ycaJ; putative ATPase
D USB125703_01960 hypothetical protein K07482 K07482; transposase, IS30 family
D USB125703_02043 hypothetical protein K07483 K07483; transposase
D USB125703_00309 hypothetical protein K07483 K07483; transposase
D USB125703_01149 hypothetical protein K07483 K07483; transposase
D USB125703_01156 hypothetical protein K07483 K07483; transposase
D USB125703_01234 Insertion element IS6110 uncharacterized 12.0 kDa protein K07483 K07483; transposase
D USB125703_01243 hypothetical protein K07483 K07483; transposase
D USB125703_01245 hypothetical protein K07483 K07483; transposase
D USB125703_00141 hypothetical protein K07497 K07497; putative transposase
D USB125703_00222 hypothetical protein K07497 K07497; putative transposase
D USB125703_00223 hypothetical protein K07497 K07497; putative transposase
D USB125703_00229 hypothetical protein K07497 K07497; putative transposase
D USB125703_00308 hypothetical protein K07497 K07497; putative transposase
D USB125703_01148 hypothetical protein K07497 K07497; putative transposase
D USB125703_01155 hypothetical protein K07497 K07497; putative transposase
D USB125703_01231 hypothetical protein K07497 K07497; putative transposase
D USB125703_01239 hypothetical protein K07497 K07497; putative transposase
D USB125703_00224 hypothetical protein K07497 K07497; putative transposase
D USB125703_01244 hypothetical protein K07497 K07497; putative transposase
D USB125703_00840 hypothetical protein K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D USB125703_01554 Phage shock protein A K03969 pspA; phage shock protein A
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D USB125703_01920 gabP_2; GABA permease K03293 TC.AAT; amino acid transporter, AAT family
D USB125703_00936 putative transporter K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D USB125703_00750 panF; Sodium/pantothenate symporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D USB125703_01478 hypothetical protein K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D USB125703_01104 alsT; Amino-acid carrier protein AlsT K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
C 99978 Cell growth
D USB125703_00725 hypothetical protein K06346 jag; spoIIIJ-associated protein
C 99993 Cell motility
C 99995 Signaling proteins
D USB125703_01738 cstA; Peptide transporter CstA K06200 cstA; carbon starvation protein
D USB125703_01429 typA; GTP-binding protein TypA/BipA K06207 typA; GTP-binding protein
D USB125703_01638 PhoH-like protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D USB125703_01325 PhoH-like protein K07175 phoH2; PhoH-like ATPase
D USB125703_00887 hypothetical protein K09767 yajQ; cyclic-di-GMP-binding protein
C 99992 Structural proteins
C 99994 Others
D USB125703_00303 phoU2; Phosphate-specific transport system accessory protein PhoU K02039 phoU; phosphate transport system protein
B
B 09194 Poorly characterized
C 99996 General function prediction only
D USB125703_00115 glbO; Group 2 truncated hemoglobin GlbO K06886 glbN; hemoglobin
D USB125703_01118 ydfJ; Membrane protein YdfJ K06994 K06994; putative drug exporter of the RND superfamily
D USB125703_01349 putative NTE family protein K07001 K07001; NTE family protein
D USB125703_01362 yjjG; Pyrimidine 5'-nucleotidase YjjG K07025 K07025; putative hydrolase of the HAD superfamily
D USB125703_01865 hypothetical protein K09014 sufB; Fe-S cluster assembly protein SufB
D USB125703_01866 hypothetical protein K09015 sufD; Fe-S cluster assembly protein SufD
D USB125703_00995 yhjD; Inner membrane protein YhjD K07058 K07058; membrane protein
D USB125703_01746 putative SufE-like protein K02426 sufE; cysteine desulfuration protein SufE
D USB125703_00687 hypothetical protein K04750 phnB; PhnB protein
D USB125703_00695 putative protein K04750 phnB; PhnB protein
D USB125703_01361 hypothetical protein K04750 phnB; PhnB protein
D USB125703_01315 lemA; Protein LemA K03744 lemA; LemA protein
D USB125703_00032 dedA; Protein DedA K03975 dedA; membrane-associated protein
D USB125703_00616 yueB; ESX secretion system protein YueB K01421 yhgE; putative membrane protein
D USB125703_01119 hypothetical protein K01421 yhgE; putative membrane protein
D USB125703_00675 hypothetical protein K08972 K08972; putative membrane protein
D USB125703_00532 hypothetical protein K08981 K08981; putative membrane protein
D USB125703_01985 hypothetical protein K08987 K08987; putative membrane protein
D USB125703_01411 hypothetical protein K09858 K09858; SEC-C motif domain protein
C 99997 Function unknown
D USB125703_00690 hypothetical protein K06867 K06867; uncharacterized protein
D USB125703_00775 hypothetical protein K06867 K06867; uncharacterized protein
D USB125703_01744 hypothetical protein K06889 K06889; uncharacterized protein
D USB125703_01569 hypothetical protein K06889 K06889; uncharacterized protein
D USB125703_01222 hypothetical protein K06960 K06960; uncharacterized protein
D USB125703_00817 hypothetical protein K06975 K06975; uncharacterized protein
D USB125703_00555 hypothetical protein K06996 K06996; uncharacterized protein
D USB125703_00004 putative protein K07005 K07005; uncharacterized protein
D USB125703_00193 hypothetical protein K07018 K07018; uncharacterized protein
D USB125703_01297 hypothetical protein K07045 K07045; uncharacterized protein
D USB125703_00570 putative protein K07054 K07054; uncharacterized protein
D USB125703_01630 Epimerase family protein K07071 K07071; uncharacterized protein
D USB125703_01418 KsdD-like steroid dehydrogenase K07077 K07077; uncharacterized protein
D USB125703_00053 hypothetical protein K07090 K07090; uncharacterized protein
D USB125703_00944 cpdA; 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA K07098 K07098; uncharacterized protein
D USB125703_01694 putative protein K07164 K07164; uncharacterized protein
D USB125703_00727 yidD; Putative membrane protein insertion efficiency factor K08998 K08998; uncharacterized protein
D USB125703_01313 hypothetical protein K09009 K09009; uncharacterized protein
D USB125703_01463 hypothetical protein K09118 K09118; uncharacterized protein
D USB125703_00533 hypothetical protein K09167 K09167; uncharacterized protein
D USB125703_01933 yedI; Inner membrane protein YedI K09781 K09781; uncharacterized protein
D USB125703_01750 hypothetical protein K09793 K09793; uncharacterized protein
D USB125703_01358 hypothetical protein K09807 K09807; uncharacterized protein
D USB125703_01585 hypothetical protein K09861 K09861; uncharacterized protein
D USB125703_00962 hypothetical protein K09932 K09932; uncharacterized protein
D USB125703_01633 hypothetical protein K09940 K09940; uncharacterized protein
D USB125703_01831 hypothetical protein K09959 K09959; uncharacterized protein
!
#
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: September 20, 2024