+D GENES KO
#
KEGG Orthology (KO) - Pseudoalteromonas sp. LC2018020214
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:pslc00010]
D JG479_07060 glk; (GenBank) glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D JG479_10185 pgi; (GenBank) glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D JG479_10425 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D JG479_14060 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D JG479_10430 fbaA; (GenBank) class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D JG479_12970 fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D JG479_04930 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D JG479_05935 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D JG479_07080 gap; (GenBank) type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D JG479_12975 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D JG479_14445 gpmM; (GenBank) 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D JG479_04260 eno; (GenBank) phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D JG479_07310 pyk; (GenBank) pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D JG479_16770 ppsA; (GenBank) phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D JG479_14335 aceE; (GenBank) pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D JG479_14330 aceF; (GenBank) pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D JG479_04340 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JG479_14325 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JG479_07210 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D JG479_17010 adhP; (GenBank) alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D JG479_11945 NAD(P)-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D JG479_09495 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JG479_12355 acs; (GenBank) acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D JG479_00905 galactose mutarotase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D JG479_08935 galactose mutarotase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D JG479_08285 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D JG479_16260 D-hexose-6-phosphate mutarotase K01792 E5.1.3.15; glucose-6-phosphate 1-epimerase [EC:5.1.3.15]
D JG479_01315 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D JG479_06920 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
C 00020 Citrate cycle (TCA cycle) [PATH:pslc00020]
D JG479_08370 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D JG479_06645 prpC; (GenBank) 2-methylcitrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D JG479_00755 acnA; (GenBank) aconitate hydratase AcnA K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D JG479_00880 acnB; (GenBank) bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D JG479_06770 icd; (GenBank) NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D JG479_08770 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D JG479_17220 isocitrate dehydrogenase K00030 IDH3; isocitrate dehydrogenase (NAD+) [EC:1.1.1.41]
D JG479_08345 sucA; (GenBank) 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D JG479_08340 odhB; (GenBank) 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D JG479_04340 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JG479_14325 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JG479_08330 sucD; (GenBank) succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D JG479_08335 sucC; (GenBank) ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D JG479_05355 acetyl-CoA hydrolase/transferase family protein K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D JG479_08355 sdhA; (GenBank) succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D JG479_08350 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D JG479_08365 sdhC; (GenBank) succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D JG479_08360 sdhD; (GenBank) succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D JG479_10045 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D JG479_00260 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D JG479_14285 mdh; (GenBank) malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D JG479_01315 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D JG479_14335 aceE; (GenBank) pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D JG479_14330 aceF; (GenBank) pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:pslc00030]
D JG479_10185 pgi; (GenBank) glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D JG479_10180 zwf; (GenBank) glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D JG479_10175 pgl; (GenBank) 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D JG479_07315 gndA; (GenBank) NADP-dependent phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D JG479_01835 rpe; (GenBank) ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D JG479_08925 tkt; (GenBank) transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D JG479_12500 tkt; (GenBank) transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D JG479_08920 tal; (GenBank) transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D JG479_13710 tal; (GenBank) transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D JG479_12520 rpiA; (GenBank) ribose-5-phosphate isomerase RpiA K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D JG479_01200 deoC; (GenBank) deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D JG479_19785 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D JG479_08285 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D JG479_10750 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D JG479_07070 phosphogluconate dehydratase K01690 edd; phosphogluconate dehydratase [EC:4.2.1.12]
D JG479_06815 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D JG479_07075 eda; (GenBank) bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D JG479_10435 eda; (GenBank) bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D JG479_08975 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
D JG479_17155 gluconokinase K00851 idnK; gluconokinase [EC:2.7.1.12]
D JG479_10440 sugar kinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D JG479_14180 DUF4147 domain-containing protein K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D JG479_10430 fbaA; (GenBank) class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D JG479_12970 fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D JG479_10425 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D JG479_14060 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
C 00040 Pentose and glucuronate interconversions [PATH:pslc00040]
D JG479_10450 cupin domain-containing protein K26933 kdgF; unsaturated pyranuronate lyase [EC:4.2.99.25]
D JG479_02410 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D JG479_02565 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D JG479_02560 galU; (GenBank) UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D JG479_04295 galU; (GenBank) UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D JG479_06525 galU; (GenBank) UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D JG479_14250 galU; (GenBank) UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D JG479_01835 rpe; (GenBank) ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D JG479_08910 xylB; (GenBank) xylulokinase K00854 xylB; xylulokinase [EC:2.7.1.17]
D JG479_08915 xylA; (GenBank) xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D JG479_01040 SDR family oxidoreductase K22185 xylB; D-xylose 1-dehydrogenase [EC:1.1.1.175]
C 00051 Fructose and mannose metabolism [PATH:pslc00051]
D JG479_14200 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D JG479_18725 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D JG479_18775 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D JG479_00560 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D JG479_16720 aldo/keto reductase K00064 E1.1.1.122; D-threo-aldose 1-dehydrogenase [EC:1.1.1.122]
D JG479_10425 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D JG479_14060 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D JG479_08915 xylA; (GenBank) xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D JG479_18780 mannitol dehydrogenase family protein K00045 mtlK; mannitol 2-dehydrogenase [EC:1.1.1.67]
D JG479_10460 polysaccharide lyase 6 family protein K01729 algL; poly(beta-D-mannuronate) lyase [EC:4.2.2.3]
D JG479_10430 fbaA; (GenBank) class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D JG479_12970 fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D JG479_04930 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D JG479_08990 glycoside hydrolase family 32 protein K03332 fruA; fructan beta-fructosidase [EC:3.2.1.80]
D JG479_19190 glycoside hydrolase family 32 protein K03332 fruA; fructan beta-fructosidase [EC:3.2.1.80]
C 00052 Galactose metabolism [PATH:pslc00052]
D JG479_00905 galactose mutarotase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D JG479_08935 galactose mutarotase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D JG479_01070 galK; (GenBank) galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D JG479_01075 UDP-glucose--hexose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D JG479_01080 galE; (GenBank) UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D JG479_02690 galE; (GenBank) UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D JG479_02560 galU; (GenBank) UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D JG479_04295 galU; (GenBank) UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D JG479_06525 galU; (GenBank) UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D JG479_14250 galU; (GenBank) UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D JG479_08285 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D JG479_07060 glk; (GenBank) glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D JG479_13070 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D JG479_00930 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D JG479_01045 2-dehydro-3-deoxygalactonokinase K00883 dgoK; 2-dehydro-3-deoxygalactonokinase [EC:2.7.1.58]
D JG479_07015 alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D JG479_15405 glycoside hydrolase family 97 protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
C 00053 Ascorbate and aldarate metabolism [PATH:pslc00053]
D JG479_02410 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D JG479_02565 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D JG479_08975 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
D JG479_16720 aldo/keto reductase K00064 E1.1.1.122; D-threo-aldose 1-dehydrogenase [EC:1.1.1.122]
D JG479_06535 NAD-dependent epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D JG479_09495 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00500 Starch and sucrose metabolism [PATH:pslc00500]
D JG479_07015 alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D JG479_15405 glycoside hydrolase family 97 protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D JG479_17655 alpha-amylase K00690 E2.4.1.7; sucrose phosphorylase [EC:2.4.1.7]
D JG479_18710 sucrose phosphorylase K00690 E2.4.1.7; sucrose phosphorylase [EC:2.4.1.7]
D JG479_02560 galU; (GenBank) UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D JG479_04295 galU; (GenBank) UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D JG479_06525 galU; (GenBank) UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D JG479_14250 galU; (GenBank) UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D JG479_08840 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D JG479_08860 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D JG479_09290 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D JG479_09430 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D JG479_09300 beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D JG479_09435 beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D JG479_11695 bcsA; (GenBank) UDP-forming cellulose synthase catalytic subunit K00694 bcsA; cellulose synthase (UDP-forming) [EC:2.4.1.12]
D JG479_08835 glycoside hydrolase family 9 protein K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D JG479_17320 cellulase family glycosylhydrolase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D JG479_17420 glgC; (GenBank) glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D JG479_17415 glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D JG479_17435 glgB; (GenBank) 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D JG479_17425 glycogen/starch/alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D JG479_15325 DUF3372 domain-containing protein K01200 pulA; pullulanase [EC:3.2.1.41]
D JG479_13680 alpha-amylase family protein K01176 AMY; alpha-amylase [EC:3.2.1.1]
D JG479_07045 glucan 1,4-alpha-glucosidase K01178 SGA1; glucoamylase [EC:3.2.1.3]
D JG479_17440 malQ; (GenBank) 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D JG479_06920 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D JG479_17430 glgX; (GenBank) glycogen debranching protein GlgX K01214 ISA; isoamylase [EC:3.2.1.68]
D JG479_08285 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D JG479_07060 glk; (GenBank) glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D JG479_10185 pgi; (GenBank) glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D JG479_14200 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D JG479_18725 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D JG479_18775 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00620 Pyruvate metabolism [PATH:pslc00620]
D JG479_12355 acs; (GenBank) acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D JG479_14335 aceE; (GenBank) pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D JG479_14330 aceF; (GenBank) pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D JG479_04340 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JG479_14325 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JG479_17010 adhP; (GenBank) alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D JG479_07210 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D JG479_11945 NAD(P)-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D JG479_06935 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D JG479_06930 pta; (GenBank) phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D JG479_07310 pyk; (GenBank) pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D JG479_05315 accA; (GenBank) acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D JG479_01025 acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D JG479_01030 accC; (GenBank) acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D JG479_04990 acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D JG479_09495 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JG479_05355 acetyl-CoA hydrolase/transferase family protein K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D JG479_18600 poxB; (GenBank) ubiquinone-dependent pyruvate dehydrogenase K00156 poxB; pyruvate dehydrogenase (quinone) [EC:1.2.5.1]
D JG479_09605 2-hydroxyacid dehydrogenase K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28]
D JG479_08100 gloA; (GenBank) lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D JG479_10470 gloA; (GenBank) lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D JG479_07285 MBL fold metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D JG479_11645 glyoxylate/hydroxypyruvate reductase A K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D JG479_07945 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D JG479_01755 malate dehydrogenase K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D JG479_13485 oadA; (GenBank) sodium-extruding oxaloacetate decarboxylase subunit alpha K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D JG479_13480 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D JG479_13490 OadG family protein K01573 oadG; oxaloacetate decarboxylase (Na+ extruding) subunit gamma
D JG479_14285 mdh; (GenBank) malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D JG479_10045 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D JG479_00260 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D JG479_18140 ppc; (GenBank) phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D JG479_01315 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D JG479_16770 ppsA; (GenBank) phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D JG479_16580 malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9]
D JG479_07610 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JG479_00700 leuA; (GenBank) 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:pslc00630]
D JG479_16585 isocitrate lyase K01637 ICL; isocitrate/methylisocitrate lyase [EC:4.1.3.1 4.1.3.30]
D JG479_16580 malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9]
D JG479_14285 mdh; (GenBank) malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D JG479_08370 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D JG479_06645 prpC; (GenBank) 2-methylcitrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D JG479_00755 acnA; (GenBank) aconitate hydratase AcnA K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D JG479_00880 acnB; (GenBank) bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D JG479_12355 acs; (GenBank) acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D JG479_07610 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JG479_03475 catalase K03781 katE; catalase [EC:1.11.1.6]
D JG479_18795 catalase K03781 katE; catalase [EC:1.11.1.6]
D JG479_11645 glyoxylate/hydroxypyruvate reductase A K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D JG479_14020 D-2-hydroxyacid dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D JG479_01840 phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D JG479_00795 glnA; (GenBank) glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JG479_12860 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D JG479_03330 gcvP; (GenBank) aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D JG479_03320 gcvT; (GenBank) glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D JG479_04340 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JG479_14325 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JG479_03325 gcvH; (GenBank) glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D JG479_14180 DUF4147 domain-containing protein K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D JG479_17665 HAD-IIB family hydrolase K15918 GLYK; D-glycerate 3-kinase [EC:2.7.1.31]
D JG479_06815 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D JG479_07075 eda; (GenBank) bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D JG479_10435 eda; (GenBank) bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D JG479_12345 purU; (GenBank) formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
C 00640 Propanoate metabolism [PATH:pslc00640]
D JG479_12355 acs; (GenBank) acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D JG479_13130 propionyl-CoA synthetase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D JG479_06935 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D JG479_06930 pta; (GenBank) phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D JG479_08275 thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D JG479_08270 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D JG479_08265 dihydrolipoyllysine-residue acetyltransferase K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D JG479_04340 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JG479_14325 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JG479_07775 oxidoreductase K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-]
D JG479_00055 fadB; (GenBank) fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D JG479_11290 fadJ; (GenBank) fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D JG479_05315 accA; (GenBank) acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D JG479_01025 acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D JG479_01030 accC; (GenBank) acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D JG479_04990 acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D JG479_08335 sucC; (GenBank) ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D JG479_08330 sucD; (GenBank) succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D JG479_07615 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D JG479_06645 prpC; (GenBank) 2-methylcitrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D JG479_06650 acnD; (GenBank) Fe/S-dependent 2-methylisocitrate dehydratase AcnD K20455 acnD; 2-methylcitrate dehydratase (2-methyl-trans-aconitate forming) [EC:4.2.1.117]
D JG479_06655 prpF; (GenBank) 2-methylaconitate cis-trans isomerase PrpF K09788 prpF; 2-methylaconitate isomerase [EC:5.3.3.-]
D JG479_00755 acnA; (GenBank) aconitate hydratase AcnA K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D JG479_00880 acnB; (GenBank) bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D JG479_06640 prpB; (GenBank) methylisocitrate lyase K03417 prpB; methylisocitrate lyase [EC:4.1.3.30]
D JG479_16585 isocitrate lyase K01637 ICL; isocitrate/methylisocitrate lyase [EC:4.1.3.1 4.1.3.30]
D JG479_11760 methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3]
D JG479_13080 iron-containing alcohol dehydrogenase K08325 yqhD; NADP-dependent alcohol dehydrogenase [EC:1.1.-.-]
C 00650 Butanoate metabolism [PATH:pslc00650]
D JG479_07610 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JG479_00055 fadB; (GenBank) fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D JG479_11290 fadJ; (GenBank) fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D JG479_12140 trans-2-enoyl-CoA reductase family protein K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D JG479_13480 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D JG479_08355 sdhA; (GenBank) succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D JG479_08350 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D JG479_08365 sdhC; (GenBank) succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D JG479_08360 sdhD; (GenBank) succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D JG479_02235 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D JG479_03610 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D JG479_05355 acetyl-CoA hydrolase/transferase family protein K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D JG479_07580 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D JG479_07575 CoA transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D JG479_07570 CoA transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D JG479_01525 acetolactate synthase 2 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D JG479_17230 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D JG479_17235 ilvN; (GenBank) acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D JG479_01530 ilvM; (GenBank) acetolactate synthase 2 small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:pslc00660]
D JG479_01525 acetolactate synthase 2 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D JG479_17230 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D JG479_17235 ilvN; (GenBank) acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D JG479_01530 ilvM; (GenBank) acetolactate synthase 2 small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D JG479_08335 sucC; (GenBank) ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D JG479_08330 sucD; (GenBank) succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D JG479_00710 leuC; (GenBank) 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D JG479_00715 leuD; (GenBank) 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D JG479_00705 leuB; (GenBank) 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:pslc00562]
D JG479_14620 suhB; (GenBank) inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D JG479_18450 Gfo/Idh/MocA family oxidoreductase K22230 iolU; scyllo-inositol 2-dehydrogenase (NADP+) [EC:1.1.1.-]
D JG479_07615 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D JG479_04930 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:pslc00190]
D JG479_19610 NAD(P)/FAD-dependent oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D JG479_08355 sdhA; (GenBank) succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D JG479_08350 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D JG479_08365 sdhC; (GenBank) succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D JG479_08360 sdhD; (GenBank) succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D JG479_03005 petA; (GenBank) ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D JG479_03010 cytochrome b N-terminal domain-containing protein K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D JG479_03015 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D JG479_12070 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D JG479_15750 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D JG479_12075 cyoD; (GenBank) cytochrome o ubiquinol oxidase subunit IV K02300 cyoD; cytochrome o ubiquinol oxidase subunit IV
D JG479_15775 cytochrome c oxidase subunit 3 K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D JG479_15785 ctaD; (GenBank) cytochrome c oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D JG479_15790 coxB; (GenBank) cytochrome c oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D JG479_15780 cytochrome c oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D JG479_15755 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D JG479_06285 ccoN; (GenBank) cytochrome-c oxidase, cbb3-type subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D JG479_06280 ccoO; (GenBank) cytochrome-c oxidase, cbb3-type subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D JG479_06275 CcoQ/FixQ family Cbb3-type cytochrome c oxidase assembly chaperone K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D JG479_06270 ccoP; (GenBank) cytochrome-c oxidase, cbb3-type subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D JG479_12080 cyoC; (GenBank) cytochrome o ubiquinol oxidase subunit III K02299 cyoC; cytochrome o ubiquinol oxidase subunit III
D JG479_12085 cyoB; (GenBank) cytochrome o ubiquinol oxidase subunit I K02298 cyoB; cytochrome o ubiquinol oxidase subunit I [EC:7.1.1.3]
D JG479_12090 cyoA; (GenBank) ubiquinol oxidase subunit II K02297 cyoA; cytochrome o ubiquinol oxidase subunit II [EC:7.1.1.3]
D JG479_05295 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D JG479_05290 cydB; (GenBank) cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D JG479_05285 cydX; (GenBank) cytochrome bd-I oxidase subunit CydX K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7]
D JG479_14815 c-type cytochrome K08738 CYC; cytochrome c
D JG479_16480 atpA; (GenBank) F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D JG479_16470 atpD; (GenBank) F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D JG479_16475 atpG; (GenBank) F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D JG479_16485 atpH; (GenBank) F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D JG479_16465 atpC; (GenBank) F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D JG479_16500 atpB; (GenBank) F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D JG479_16490 atpF; (GenBank) F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D JG479_16495 atpE; (GenBank) F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D JG479_18635 plasma-membrane proton-efflux P-type ATPase K01535 PMA1; H+-transporting ATPase [EC:7.1.2.1]
D JG479_14140 manganese-dependent inorganic pyrophosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:pslc00710]
D JG479_12975 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D JG479_05935 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D JG479_07080 gap; (GenBank) type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D JG479_10430 fbaA; (GenBank) class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D JG479_12970 fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D JG479_10425 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D JG479_14060 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D JG479_08925 tkt; (GenBank) transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D JG479_12500 tkt; (GenBank) transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D JG479_12520 rpiA; (GenBank) ribose-5-phosphate isomerase RpiA K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D JG479_03195 phosphoribulokinase K28462 prkA_B; phosphoribulokinase [EC:2.7.1.19]
D JG479_04930 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D JG479_01835 rpe; (GenBank) ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D JG479_08920 tal; (GenBank) transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D JG479_13710 tal; (GenBank) transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D JG479_18140 ppc; (GenBank) phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D JG479_01315 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D JG479_01755 malate dehydrogenase K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D JG479_14285 mdh; (GenBank) malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
C 00720 Other carbon fixation pathways [PATH:pslc00720]
D JG479_16770 ppsA; (GenBank) phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D JG479_18140 ppc; (GenBank) phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D JG479_14285 mdh; (GenBank) malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D JG479_10045 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D JG479_00260 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D JG479_08355 sdhA; (GenBank) succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D JG479_08350 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D JG479_08365 sdhC; (GenBank) succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D JG479_08360 sdhD; (GenBank) succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D JG479_08330 sucD; (GenBank) succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D JG479_08335 sucC; (GenBank) ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D JG479_07610 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JG479_06770 icd; (GenBank) NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D JG479_08770 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D JG479_00755 acnA; (GenBank) aconitate hydratase AcnA K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D JG479_00880 acnB; (GenBank) bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D JG479_05315 accA; (GenBank) acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D JG479_01025 acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D JG479_01030 accC; (GenBank) acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D JG479_04990 acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D JG479_05045 folD; (GenBank) bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D JG479_06930 pta; (GenBank) phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D JG479_06935 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D JG479_12355 acs; (GenBank) acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
C 00680 Methane metabolism [PATH:pslc00680]
D JG479_07210 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D JG479_07205 fghA; (GenBank) S-formylglutathione hydrolase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12]
D JG479_12860 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D JG479_14020 D-2-hydroxyacid dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D JG479_14180 DUF4147 domain-containing protein K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D JG479_04260 eno; (GenBank) phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D JG479_18140 ppc; (GenBank) phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D JG479_14285 mdh; (GenBank) malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D JG479_10430 fbaA; (GenBank) class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D JG479_12970 fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D JG479_10425 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D JG479_14060 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D JG479_06935 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D JG479_06930 pta; (GenBank) phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D JG479_12355 acs; (GenBank) acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D JG479_16770 ppsA; (GenBank) phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D JG479_14445 gpmM; (GenBank) 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D JG479_12525 serA; (GenBank) phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D JG479_07440 serC; (GenBank) 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D JG479_03945 serB; (GenBank) phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 00910 Nitrogen metabolism [PATH:pslc00910]
D JG479_09205 NarK family nitrate/nitrite MFS transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D JG479_09185 nitrate reductase K00372 nasC; assimilatory nitrate reductase catalytic subunit [EC:1.7.99.-]
D JG479_09100 nirB; (GenBank) nitrite reductase large subunit K00362 nirB; nitrite reductase (NADH) large subunit [EC:1.7.1.15]
D JG479_09190 FAD-dependent oxidoreductase K00362 nirB; nitrite reductase (NADH) large subunit [EC:1.7.1.15]
D JG479_09105 nirD; (GenBank) nitrite reductase small subunit NirD K00363 nirD; nitrite reductase (NADH) small subunit [EC:1.7.1.15]
D JG479_08455 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D JG479_07240 gdhA; (GenBank) NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D JG479_00795 glnA; (GenBank) glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JG479_09815 gltB; (GenBank) glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D JG479_09810 FAD-dependent oxidoreductase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D JG479_01555 can; (GenBank) carbonate dehydratase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:pslc00920]
D JG479_01185 cysN; (GenBank) sulfate adenylyltransferase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D JG479_02540 cysN; (GenBank) sulfate adenylyltransferase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D JG479_01190 cysD; (GenBank) sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D JG479_02535 cysD; (GenBank) sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D JG479_01175 cysC; (GenBank) adenylyl-sulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D JG479_02550 cysC; (GenBank) adenylyl-sulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D JG479_01170 cysQ; (GenBank) 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D JG479_15090 cysQ; (GenBank) 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D JG479_00740 phosphoadenylyl-sulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D JG479_00730 assimilatory sulfite reductase (NADPH) flavoprotein subunit K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
D JG479_00735 cysI; (GenBank) assimilatory sulfite reductase (NADPH) hemoprotein subunit K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
D JG479_14075 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D JG479_12640 glpE; (GenBank) thiosulfate sulfurtransferase GlpE K02439 glpE; thiosulfate sulfurtransferase [EC:2.8.1.1]
D JG479_03855 cysE; (GenBank) serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D JG479_06570 hypothetical protein K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D JG479_12025 metA; (GenBank) homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D JG479_01765 metB; (GenBank) cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:pslc00061]
D JG479_05315 accA; (GenBank) acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D JG479_01025 acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D JG479_01030 accC; (GenBank) acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D JG479_04990 acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D JG479_06460 acpP; (GenBank) acyl carrier protein K02078 acpP; acyl carrier protein
D JG479_06450 fabD; (GenBank) ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D JG479_18205 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D JG479_07180 beta-ketoacyl synthase K18473 fabY; acetoacetyl-[acyl-carrier protein] synthase [EC:2.3.1.180]
D JG479_11360 fabB; (GenBank) beta-ketoacyl-ACP synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D JG479_06465 fabF; (GenBank) beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D JG479_06455 fabG; (GenBank) 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D JG479_07640 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D JG479_07790 fabA; (GenBank) bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D JG479_05260 fabZ; (GenBank) 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D JG479_12140 trans-2-enoyl-CoA reductase family protein K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D JG479_17060 fadD; (GenBank) long-chain-fatty-acid--CoA ligase FadD K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:pslc00071]
D JG479_07610 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JG479_00050 fadA; (GenBank) acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D JG479_11295 fadI; (GenBank) acetyl-CoA C-acyltransferase FadI K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D JG479_00055 fadB; (GenBank) fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D JG479_11290 fadJ; (GenBank) fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D JG479_17825 acyl-CoA dehydrogenase K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-]
D JG479_17060 fadD; (GenBank) long-chain-fatty-acid--CoA ligase FadD K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D JG479_09490 FAD-dependent oxidoreductase K05297 rubB; rubredoxin---NAD+ reductase [EC:1.18.1.1]
D JG479_07210 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D JG479_17010 adhP; (GenBank) alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D JG479_09495 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00074 Mycolic acid biosynthesis
D JG479_06460 acpP; (GenBank) acyl carrier protein K02078 acpP; acyl carrier protein
D JG479_06450 fabD; (GenBank) ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:pslc00561]
D JG479_14180 DUF4147 domain-containing protein K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D JG479_17665 HAD-IIB family hydrolase K15918 GLYK; D-glycerate 3-kinase [EC:2.7.1.31]
D JG479_09495 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JG479_11945 NAD(P)-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D JG479_01055 glpK; (GenBank) glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30]
D JG479_14980 plsB; (GenBank) glycerol-3-phosphate 1-O-acyltransferase PlsB K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D JG479_06445 plsX; (GenBank) phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D JG479_12585 plsY; (GenBank) glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D JG479_13830 1-acylglycerol-3-phosphate O-acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D JG479_01290 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D JG479_01515 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D JG479_15560 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D JG479_00930 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
C 00564 Glycerophospholipid metabolism [PATH:pslc00564]
D JG479_14425 gpsA; (GenBank) NAD(P)H-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D JG479_01050 glpD; (GenBank) glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D JG479_14980 plsB; (GenBank) glycerol-3-phosphate 1-O-acyltransferase PlsB K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D JG479_12585 plsY; (GenBank) glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D JG479_13830 1-acylglycerol-3-phosphate O-acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D JG479_01290 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D JG479_01515 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D JG479_15560 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D JG479_00840 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D JG479_14410 alpha/beta fold hydrolase K01048 pldB; lysophospholipase [EC:3.1.1.5]
D JG479_03265 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D JG479_11810 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D JG479_19745 ethanolamine ammonia-lyase subunit EutB K03735 eutB; ethanolamine ammonia-lyase large subunit [EC:4.3.1.7]
D JG479_19750 eutC; (GenBank) ethanolamine ammonia-lyase subunit EutC K03736 eutC; ethanolamine ammonia-lyase small subunit [EC:4.3.1.7]
D JG479_05230 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D JG479_08730 pssA; (GenBank) CDP-diacylglycerol--serine O-phosphatidyltransferase K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D JG479_02770 psd; (GenBank) phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D JG479_12820 phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27]
C 00565 Ether lipid metabolism [PATH:pslc00565]
D JG479_00840 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00600 Sphingolipid metabolism [PATH:pslc00600]
D JG479_13070 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D JG479_00930 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
C 00590 Arachidonic acid metabolism [PATH:pslc00590]
D JG479_00840 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D JG479_00585 M1 family metallopeptidase K01254 LTA4H; leukotriene-A4 hydrolase [EC:3.3.2.6]
C 00591 Linoleic acid metabolism
D JG479_00840 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00592 alpha-Linolenic acid metabolism [PATH:pslc00592]
D JG479_00840 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D JG479_00050 fadA; (GenBank) acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D JG479_11295 fadI; (GenBank) acetyl-CoA C-acyltransferase FadI K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids [PATH:pslc01040]
D JG479_00690 fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D JG479_09350 acyl-CoA desaturase K22769 desA3; NADPH-dependent stearoyl-CoA 9-desaturase [EC:1.14.19.-]
D JG479_09355 iron-sulfur cluster-binding domain-containing protein K22770 K22770; stearoyl-CoA 9-desaturase NADPH oxidoreductase
D JG479_06040 arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D JG479_14985 tesB; (GenBank) acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:pslc00230]
D JG479_13865 NUDIX domain-containing protein K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D JG479_15095 nudE; (GenBank) ADP compounds hydrolase NudE K08312 nudE; ADP compounds hydrolase [EC:3.6.1.-]
D JG479_19785 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D JG479_08285 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D JG479_10750 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D JG479_05010 purF; (GenBank) amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D JG479_14535 purD; (GenBank) phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D JG479_12720 purL; (GenBank) phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D JG479_07970 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D JG479_07975 purE; (GenBank) 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D JG479_14105 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D JG479_08590 purB; (GenBank) adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D JG479_14525 purH; (GenBank) bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D JG479_09925 apt; (GenBank) adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D JG479_11720 metallophosphoesterase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D JG479_18000 bifunctional UDP-sugar hydrolase/5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D JG479_12405 surE; (GenBank) 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D JG479_15100 yrfG; (GenBank) GMP/IMP nucleotidase K20881 yrfG; GMP/IMP 5'-nucleotidase [EC:3.1.3.-]
D JG479_12740 inosine/guanosine kinase K00892 gsk; inosine kinase [EC:2.7.1.73]
D JG479_19780 deoD; (GenBank) purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D JG479_12495 pyrimidine/purine nucleoside phosphorylase K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
D JG479_11525 pgeF; (GenBank) peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D JG479_03870 guaB; (GenBank) IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D JG479_19425 ndk; (GenBank) nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D JG479_03190 yjjX; (GenBank) inosine/xanthosine triphosphatase K01529 yjjX; inosine/xanthosine triphosphatase [EC:3.6.1.73]
D JG479_13950 XTP/dITP diphosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D JG479_18995 xdhA; (GenBank) xanthine dehydrogenase small subunit K13481 xdhA; xanthine dehydrogenase small subunit [EC:1.17.1.4]
D JG479_19000 xdhB; (GenBank) xanthine dehydrogenase molybdopterin binding subunit K13482 xdhB; xanthine dehydrogenase large subunit [EC:1.17.1.4]
D JG479_03875 guaA; (GenBank) glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D JG479_19020 guaD; (GenBank) guanine deaminase K01487 guaD; guanine deaminase [EC:3.5.4.3]
D JG479_00975 gmk; (GenBank) guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D JG479_07420 nrdA; (GenBank) ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D JG479_07415 nrdB; (GenBank) ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D JG479_09325 deoxyguanosinetriphosphate triphosphohydrolase family protein K01129 dgt; dGTPase [EC:3.1.5.1]
D JG479_19930 dgt; (GenBank) dGTPase K01129 dgt; dGTPase [EC:3.1.5.1]
D JG479_00965 spoT; (GenBank) bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D JG479_15895 gppA; (GenBank) guanosine-5'-triphosphate,3'-diphosphate diphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D JG479_04245 relA; (GenBank) GTP diphosphokinase K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5]
D JG479_02245 adenylate/guanylate cyclase domain-containing protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D JG479_14880 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D JG479_15975 add; (GenBank) adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4]
D JG479_17200 LOG family protein K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-]
D JG479_09890 adk; (GenBank) adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D JG479_04250 mazG; (GenBank) nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D JG479_13855 metallophosphoesterase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
D JG479_02585 symmetrical bis(5'-nucleosyl)-tetraphosphatase K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41]
D JG479_01175 cysC; (GenBank) adenylyl-sulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D JG479_02550 cysC; (GenBank) adenylyl-sulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D JG479_01185 cysN; (GenBank) sulfate adenylyltransferase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D JG479_02540 cysN; (GenBank) sulfate adenylyltransferase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D JG479_01190 cysD; (GenBank) sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D JG479_02535 cysD; (GenBank) sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D JG479_19015 uraH; (GenBank) hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
D JG479_19010 uraD; (GenBank) 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase K16840 hpxQ; 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase [EC:4.1.1.97]
D JG479_19030 puuE; (GenBank) allantoinase PuuE K16842 hpxB; allantoinase [EC:3.5.2.5]
D JG479_18860 allantoate amidohydrolase K02083 allC; allantoate deiminase [EC:3.5.3.9]
D JG479_18855 alanine--glyoxylate aminotransferase family protein K00839 pucG; (S)-ureidoglycine---glyoxylate transaminase [EC:2.6.1.112]
D JG479_18845 gamma-glutamyltransferase K22602 hpxW; oxamate amidohydrolase [EC:3.5.1.126]
C 00240 Pyrimidine metabolism [PATH:pslc00240]
D JG479_09730 carB; (GenBank) carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D JG479_09735 carA; (GenBank) glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D JG479_12200 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D JG479_09995 pyrC; (GenBank) dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D JG479_08450 pyrD; (GenBank) quinone-dependent dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D JG479_01285 pyrE; (GenBank) orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D JG479_07475 pyrF; (GenBank) orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D JG479_05215 pyrH; (GenBank) UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D JG479_19425 ndk; (GenBank) nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D JG479_04250 mazG; (GenBank) nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D JG479_02135 maf; (GenBank) septum formation inhibitor Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D JG479_04255 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D JG479_07450 cmk; (GenBank) (d)CMP kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D JG479_19790 udk; (GenBank) uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D JG479_11720 metallophosphoesterase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D JG479_18000 bifunctional UDP-sugar hydrolase/5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D JG479_12405 surE; (GenBank) 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D JG479_03185 yjjG; (GenBank) pyrimidine 5'-nucleotidase K08723 yjjG; pyrimidine 5'-nucleotidase [EC:3.1.3.-]
D JG479_18130 udp; (GenBank) uridine phosphorylase K00757 udp; uridine phosphorylase [EC:2.4.2.3]
D JG479_12495 pyrimidine/purine nucleoside phosphorylase K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
D JG479_17675 upp; (GenBank) uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D JG479_17200 LOG family protein K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-]
D JG479_18135 cdd; (GenBank) cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D JG479_06840 dcd; (GenBank) dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D JG479_07420 nrdA; (GenBank) ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D JG479_07415 nrdB; (GenBank) ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D JG479_06480 dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D JG479_18255 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D JG479_04290 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:pslc00250]
D JG479_11430 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D JG479_04180 nadB; (GenBank) L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D JG479_07320 ansA; (GenBank) asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D JG479_10165 isoaspartyl peptidase/L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D JG479_00950 aspartate--ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D JG479_07530 asnB; (GenBank) asparagine synthase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D JG479_00555 amidohydrolase K13566 NIT2; omega-amidase [EC:3.5.1.3]
D JG479_06860 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D JG479_08725 ald; (GenBank) alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D JG479_03985 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D JG479_03990 argH; (GenBank) argininosuccinate lyase K14681 argHA; argininosuccinate lyase / amino-acid N-acetyltransferase [EC:4.3.2.1 2.3.1.1]
D JG479_14880 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D JG479_08590 purB; (GenBank) adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D JG479_12200 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D JG479_02235 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D JG479_03610 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D JG479_09815 gltB; (GenBank) glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D JG479_09810 FAD-dependent oxidoreductase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D JG479_08455 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D JG479_07240 gdhA; (GenBank) NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D JG479_04105 putA; (GenBank) bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D JG479_00795 glnA; (GenBank) glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JG479_09730 carB; (GenBank) carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D JG479_09735 carA; (GenBank) glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D JG479_12745 glsB; (GenBank) glutaminase B K01425 glsA; glutaminase [EC:3.5.1.2]
D JG479_16410 glmS; (GenBank) glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D JG479_05010 purF; (GenBank) amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:pslc00260]
D JG479_09620 lysC; (GenBank) lysine-sensitive aspartokinase 3 K00928 lysC; aspartate kinase [EC:2.7.2.4]
D JG479_13515 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D JG479_12875 thrA; (GenBank) bifunctional aspartate kinase/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D JG479_01770 metL; (GenBank) bifunctional aspartate kinase/homoserine dehydrogenase II K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
D JG479_04975 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D JG479_16915 asd; (GenBank) aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D JG479_12870 thrB; (GenBank) homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D JG479_12865 thrC; (GenBank) threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D JG479_18250 ltaE; (GenBank) low-specificity L-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D JG479_12860 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D JG479_14020 D-2-hydroxyacid dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D JG479_11645 glyoxylate/hydroxypyruvate reductase A K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D JG479_14180 DUF4147 domain-containing protein K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D JG479_14445 gpmM; (GenBank) 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D JG479_17665 HAD-IIB family hydrolase K15918 GLYK; D-glycerate 3-kinase [EC:2.7.1.31]
D JG479_12525 serA; (GenBank) phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D JG479_07440 serC; (GenBank) 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D JG479_03945 serB; (GenBank) phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D JG479_12650 glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D JG479_12645 tdh; (GenBank) L-threonine 3-dehydrogenase K00060 tdh; threonine 3-dehydrogenase [EC:1.1.1.103]
D JG479_03330 gcvP; (GenBank) aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D JG479_03320 gcvT; (GenBank) glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D JG479_04340 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JG479_14325 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JG479_03325 gcvH; (GenBank) glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D JG479_08730 pssA; (GenBank) CDP-diacylglycerol--serine O-phosphatidyltransferase K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D JG479_17515 betA; (GenBank) choline dehydrogenase K00108 betA; choline dehydrogenase [EC:1.1.99.1]
D JG479_17510 betB; (GenBank) betaine-aldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8]
D JG479_10060 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D JG479_01540 ilvA; (GenBank) threonine ammonia-lyase, biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D JG479_06695 trpA; (GenBank) tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D JG479_06700 trpB; (GenBank) tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:pslc00270]
D JG479_03855 cysE; (GenBank) serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D JG479_06570 hypothetical protein K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D JG479_12015 metH; (GenBank) methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D JG479_12020 homocysteine S-methyltransferase family protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D JG479_07700 methionine synthase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D JG479_12505 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D JG479_01145 speD; (GenBank) adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D JG479_00220 polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
D JG479_00830 methyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
D JG479_15385 speE; (GenBank) polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
D JG479_19870 fused MFS/spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D JG479_13450 mtnN; (GenBank) 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D JG479_00520 mtnK; (GenBank) S-methyl-5-thioribose kinase K00899 mtnK; 5-methylthioribose kinase [EC:2.7.1.100]
D JG479_11525 pgeF; (GenBank) peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D JG479_00525 mtnA; (GenBank) S-methyl-5-thioribose-1-phosphate isomerase K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23]
D JG479_00545 methylthioribulose 1-phosphate dehydratase K08964 mtnB; methylthioribulose-1-phosphate dehydratase [EC:4.2.1.109]
D JG479_00540 mtnC; (GenBank) acireductone synthase K09880 mtnC; enolase-phosphatase E1 [EC:3.1.3.77]
D JG479_00535 acireductone dioxygenase K08967 mtnD; 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase [EC:1.13.11.53 1.13.11.54]
D JG479_05165 megL; (GenBank) methionine gamma-lyase K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11]
D JG479_08510 GAF domain-containing protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D JG479_11435 histidine kinase K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D JG479_19650 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D JG479_09620 lysC; (GenBank) lysine-sensitive aspartokinase 3 K00928 lysC; aspartate kinase [EC:2.7.2.4]
D JG479_13515 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D JG479_12875 thrA; (GenBank) bifunctional aspartate kinase/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D JG479_01770 metL; (GenBank) bifunctional aspartate kinase/homoserine dehydrogenase II K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
D JG479_04975 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D JG479_16915 asd; (GenBank) aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D JG479_12870 thrB; (GenBank) homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D JG479_12025 metA; (GenBank) homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D JG479_01765 metB; (GenBank) cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D JG479_09345 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D JG479_11510 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D JG479_13905 gshB; (GenBank) glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D JG479_11430 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D JG479_14075 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D JG479_14285 mdh; (GenBank) malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D JG479_10060 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D JG479_12525 serA; (GenBank) phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D JG479_07440 serC; (GenBank) 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:pslc00280]
D JG479_09345 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D JG479_10040 Glu/Leu/Phe/Val dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9]
D JG479_08275 thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D JG479_08270 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D JG479_08265 dihydrolipoyllysine-residue acetyltransferase K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D JG479_04340 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JG479_14325 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JG479_07600 isovaleryl-CoA dehydrogenase K00253 IVD; isovaleryl-CoA dehydrogenase [EC:1.3.8.4]
D JG479_00055 fadB; (GenBank) fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D JG479_11290 fadJ; (GenBank) fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D JG479_00050 fadA; (GenBank) acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D JG479_11295 fadI; (GenBank) acetyl-CoA C-acyltransferase FadI K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D JG479_07635 mmsB; (GenBank) 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D JG479_07615 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D JG479_09495 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JG479_07585 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha K01968 MCCC1; 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4]
D JG479_07595 methylcrotonoyl-CoA carboxylase K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4]
D JG479_07590 enoyl-CoA hydratase/isomerase family protein K13766 liuC; methylglutaconyl-CoA hydratase [EC:4.2.1.18]
D JG479_07580 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D JG479_07575 CoA transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D JG479_07570 CoA transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D JG479_07610 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:pslc00290]
D JG479_01540 ilvA; (GenBank) threonine ammonia-lyase, biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D JG479_00710 leuC; (GenBank) 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D JG479_00715 leuD; (GenBank) 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D JG479_00705 leuB; (GenBank) 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D JG479_01525 acetolactate synthase 2 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D JG479_17230 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D JG479_17235 ilvN; (GenBank) acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D JG479_01530 ilvM; (GenBank) acetolactate synthase 2 small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D JG479_04810 ilvC; (GenBank) ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D JG479_01535 ilvD; (GenBank) dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D JG479_09345 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D JG479_10040 Glu/Leu/Phe/Val dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9]
D JG479_08665 valine--pyruvate transaminase K00835 avtA; valine--pyruvate aminotransferase [EC:2.6.1.66]
D JG479_06860 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D JG479_00700 leuA; (GenBank) 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:pslc00300]
D JG479_09620 lysC; (GenBank) lysine-sensitive aspartokinase 3 K00928 lysC; aspartate kinase [EC:2.7.2.4]
D JG479_13515 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D JG479_12875 thrA; (GenBank) bifunctional aspartate kinase/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D JG479_01770 metL; (GenBank) bifunctional aspartate kinase/homoserine dehydrogenase II K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
D JG479_04975 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D JG479_16915 asd; (GenBank) aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D JG479_00860 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D JG479_06165 dihydrodipicolinate synthase family protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D JG479_17560 dapA; (GenBank) 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D JG479_09740 dapB; (GenBank) 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D JG479_00855 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D JG479_05190 dapD; (GenBank) 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D JG479_01120 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D JG479_17470 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D JG479_06910 dapE; (GenBank) succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D JG479_16025 dapF; (GenBank) diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D JG479_00850 PLP-dependent decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D JG479_16020 lysA; (GenBank) diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D JG479_03125 murE; (GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D JG479_03130 murF; (GenBank) UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:pslc00310]
D JG479_08340 odhB; (GenBank) 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D JG479_04340 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JG479_14325 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JG479_00055 fadB; (GenBank) fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D JG479_11290 fadJ; (GenBank) fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D JG479_07610 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JG479_02235 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D JG479_03610 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D JG479_16780 FAD-binding oxidoreductase K26063 ydiJ; (R)-2-hydroxyglutarate dehydrogenase [EC:1.1.-.-]
D JG479_09495 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00220 Arginine biosynthesis [PATH:pslc00220]
D JG479_03980 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D JG479_03985 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D JG479_03990 argH; (GenBank) argininosuccinate lyase K14681 argHA; argininosuccinate lyase / amino-acid N-acetyltransferase [EC:4.3.2.1 2.3.1.1]
D JG479_12745 glsB; (GenBank) glutaminase B K01425 glsA; glutaminase [EC:3.5.1.2]
D JG479_00795 glnA; (GenBank) glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JG479_09730 carB; (GenBank) carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D JG479_09735 carA; (GenBank) glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D JG479_08455 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D JG479_07240 gdhA; (GenBank) NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D JG479_11430 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D JG479_06860 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D JG479_03975 argB; (GenBank) acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D JG479_03970 argC; (GenBank) N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D JG479_01120 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D JG479_17470 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D JG479_03965 argE; (GenBank) acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
C 00330 Arginine and proline metabolism [PATH:pslc00330]
D JG479_10405 aminotransferase class V-fold PLP-dependent enzyme K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D JG479_10635 speA; (GenBank) biosynthetic arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D JG479_15380 speA; (GenBank) biosynthetic arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D JG479_10630 speB; (GenBank) agmatinase K01480 speB; agmatinase [EC:3.5.3.11]
D JG479_18125 arginase family protein K01480 speB; agmatinase [EC:3.5.3.11]
D JG479_06320 carbon-nitrogen hydrolase K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53]
D JG479_00220 polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
D JG479_00830 methyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
D JG479_15385 speE; (GenBank) polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
D JG479_19870 fused MFS/spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D JG479_01145 speD; (GenBank) adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D JG479_09495 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JG479_17550 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D JG479_18840 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D JG479_01125 astA; (GenBank) arginine N-succinyltransferase K00673 astA; arginine N-succinyltransferase [EC:2.3.1.109]
D JG479_17475 astA; (GenBank) arginine N-succinyltransferase K00673 astA; arginine N-succinyltransferase [EC:2.3.1.109]
D JG479_19140 astB; (GenBank) N-succinylarginine dihydrolase K01484 astB; succinylarginine dihydrolase [EC:3.5.3.23]
D JG479_01130 astD; (GenBank) succinylglutamate-semialdehyde dehydrogenase K06447 astD; succinylglutamic semialdehyde dehydrogenase [EC:1.2.1.71]
D JG479_17480 astD; (GenBank) succinylglutamate-semialdehyde dehydrogenase K06447 astD; succinylglutamic semialdehyde dehydrogenase [EC:1.2.1.71]
D JG479_08280 astE; (GenBank) succinylglutamate desuccinylase K05526 astE; succinylglutamate desuccinylase [EC:3.5.1.96]
D JG479_13935 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D JG479_04105 putA; (GenBank) bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D JG479_16820 ornithine cyclodeaminase K01750 ocd; ornithine cyclodeaminase [EC:4.3.1.12]
D JG479_03795 proB; (GenBank) glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D JG479_14865 proB; (GenBank) glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D JG479_14860 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D JG479_11430 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:pslc00340]
D JG479_17105 hisG; (GenBank) ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D JG479_17140 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]
D JG479_17130 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D JG479_17125 hisH; (GenBank) imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D JG479_17135 hisF; (GenBank) imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D JG479_17120 hisB; (GenBank) bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB K01089 hisB; imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase [EC:4.2.1.19 3.1.3.15]
D JG479_17115 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D JG479_17110 hisD; (GenBank) histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D JG479_01675 hutH; (GenBank) histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D JG479_01680 hutU; (GenBank) urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49]
D JG479_01690 imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7]
D JG479_01700 formimidoylglutamase K01479 hutG; formiminoglutamase [EC:3.5.3.8]
D JG479_09495 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JG479_07520 egtD; (GenBank) L-histidine N(alpha)-methyltransferase K18911 egtD; L-histidine Nalpha-methyltransferase [EC:2.1.1.44]
C 00350 Tyrosine metabolism [PATH:pslc00350]
D JG479_11430 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D JG479_17115 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D JG479_11725 hppD; (GenBank) 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D JG479_18035 homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D JG479_18040 maiA; (GenBank) maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2]
D JG479_11730 fahA; (GenBank) fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
D JG479_07210 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D JG479_17010 adhP; (GenBank) alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D JG479_14585 5-carboxymethyl-2-hydroxymuconate Delta-isomerase K01826 hpaF; 5-carboxymethyl-2-hydroxymuconate isomerase [EC:5.3.3.10]
D JG479_02235 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D JG479_03610 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00360 Phenylalanine metabolism [PATH:pslc00360]
D JG479_05170 phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
D JG479_11430 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D JG479_17115 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D JG479_11725 hppD; (GenBank) 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D JG479_19770 katG; (GenBank) catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21]
D JG479_17550 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D JG479_18840 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00380 Tryptophan metabolism [PATH:pslc00380]
D JG479_00305 aminotransferase class V-fold PLP-dependent enzyme K01556 KYNU; kynureninase [EC:3.7.1.3]
D JG479_08340 odhB; (GenBank) 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D JG479_04340 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JG479_14325 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JG479_00055 fadB; (GenBank) fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D JG479_11290 fadJ; (GenBank) fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D JG479_07610 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JG479_09495 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JG479_17550 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D JG479_18840 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D JG479_03475 catalase K03781 katE; catalase [EC:1.11.1.6]
D JG479_18795 catalase K03781 katE; catalase [EC:1.11.1.6]
D JG479_19770 katG; (GenBank) catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:pslc00400]
D JG479_16760 3-deoxy-7-phosphoheptulonate synthase class II K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D JG479_01810 aroB; (GenBank) 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D JG479_01020 aroQ; (GenBank) type II 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D JG479_00155 aroE; (GenBank) shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D JG479_01805 aroK; (GenBank) shikimate kinase AroK K00891 aroK; shikimate kinase [EC:2.7.1.71]
D JG479_07445 aroA; (GenBank) 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D JG479_11230 aroC; (GenBank) chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D JG479_06720 anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D JG479_01110 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D JG479_06715 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D JG479_06710 trpD; (GenBank) anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D JG479_06705 trpCF; (GenBank) bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF K13498 trpCF; indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase [EC:4.1.1.48 5.3.1.24]
D JG479_06695 trpA; (GenBank) tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D JG479_06700 trpB; (GenBank) tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D JG479_11465 tyrA; (GenBank) bifunctional chorismate mutase/prephenate dehydrogenase K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12]
D JG479_11460 chorismate mutase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D JG479_11430 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D JG479_17115 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D JG479_05170 phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:pslc00410]
D JG479_09495 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JG479_12945 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D JG479_00055 fadB; (GenBank) fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D JG479_11290 fadJ; (GenBank) fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D JG479_07615 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
C 00430 Taurine and hypotaurine metabolism [PATH:pslc00430]
D JG479_07950 ggt; (GenBank) gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D JG479_11345 ggt; (GenBank) gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D JG479_08725 ald; (GenBank) alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D JG479_08455 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D JG479_06930 pta; (GenBank) phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D JG479_06935 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:pslc00450]
D JG479_01765 metB; (GenBank) cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D JG479_12015 metH; (GenBank) methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D JG479_12020 homocysteine S-methyltransferase family protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D JG479_07700 methionine synthase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D JG479_05165 megL; (GenBank) methionine gamma-lyase K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11]
D JG479_08375 SufS family cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D JG479_08735 trxB; (GenBank) thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D JG479_01185 cysN; (GenBank) sulfate adenylyltransferase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D JG479_02540 cysN; (GenBank) sulfate adenylyltransferase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D JG479_01190 cysD; (GenBank) sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D JG479_02535 cysD; (GenBank) sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D JG479_06830 metG; (GenBank) methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:pslc00460]
D JG479_08840 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D JG479_08860 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D JG479_09290 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D JG479_09430 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D JG479_09300 beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D JG479_09435 beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D JG479_07950 ggt; (GenBank) gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D JG479_11345 ggt; (GenBank) gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D JG479_07320 ansA; (GenBank) asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D JG479_10165 isoaspartyl peptidase/L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D JG479_00950 aspartate--ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D JG479_12860 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:pslc00470]
D JG479_13270 alr; (GenBank) alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D JG479_03160 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D JG479_12745 glsB; (GenBank) glutaminase B K01425 glsA; glutaminase [EC:3.5.1.2]
D JG479_01435 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D JG479_03140 murD; (GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D JG479_16025 dapF; (GenBank) diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D JG479_00850 PLP-dependent decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D JG479_16020 lysA; (GenBank) diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:pslc00480]
D JG479_07950 ggt; (GenBank) gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D JG479_11345 ggt; (GenBank) gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D JG479_16595 5-oxoprolinase subunit PxpA K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D JG479_07550 pxpB; (GenBank) 5-oxoprolinase subunit PxpB K23123 pxpB; 5-oxoprolinase (ATP-hydrolysing) subunit B [EC:3.5.2.9]
D JG479_07545 biotin-dependent carboxyltransferase family protein K23124 pxpC; 5-oxoprolinase (ATP-hydrolysing) subunit C [EC:3.5.2.9]
D JG479_11510 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D JG479_13905 gshB; (GenBank) glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D JG479_03670 leucyl aminopeptidase family protein K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D JG479_13200 pepA; (GenBank) leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D JG479_18215 leucyl aminopeptidase family protein K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D JG479_12910 pepB; (GenBank) aminopeptidase PepB K07751 pepB; PepB aminopeptidase [EC:3.4.11.23]
D JG479_08485 pepN; (GenBank) aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D JG479_11915 dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D JG479_03225 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D JG479_08660 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D JG479_11220 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D JG479_19520 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D JG479_19590 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D JG479_02170 gorA; (GenBank) glutathione-disulfide reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D JG479_06770 icd; (GenBank) NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D JG479_08770 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D JG479_07315 gndA; (GenBank) NADP-dependent phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D JG479_10180 zwf; (GenBank) glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D JG479_00355 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D JG479_03235 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D JG479_09600 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D JG479_04345 glutathione peroxidase K24136 pgdX; glutathione-dependent peroxiredoxin [EC:1.11.1.27]
D JG479_14245 peroxiredoxin K24138 prx3; glutaredoxin/glutathione-dependent peroxiredoxin [EC:1.11.1.25 1.11.1.27]
D JG479_00220 polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
D JG479_00830 methyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
D JG479_15385 speE; (GenBank) polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
D JG479_19870 fused MFS/spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D JG479_03465 gss; (GenBank) bifunctional glutathionylspermidine amidase/synthase K01460 gsp; glutathionylspermidine amidase/synthetase [EC:3.5.1.78 6.3.1.8]
B
B 09107 Glycan biosynthesis and metabolism
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:pslc00520]
D JG479_19575 anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D JG479_06920 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D JG479_07425 HAD-IA family hydrolase K22292 mupP; N-acetyl-D-muramate 6-phosphate phosphatase [EC:3.1.3.105]
D JG479_02615 phosphotransferase K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221]
D JG479_02620 nucleotidyltransferase family protein K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99]
D JG479_16460 glmU; (GenBank) bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D JG479_02970 murA; (GenBank) UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D JG479_00590 murB; (GenBank) UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D JG479_16600 glycoside hydrolase family 3 C-terminal domain-containing protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D JG479_04925 glmM; (GenBank) phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D JG479_16410 glmS; (GenBank) glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D JG479_14200 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D JG479_18725 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D JG479_18775 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D JG479_10185 pgi; (GenBank) glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D JG479_00560 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D JG479_08900 glycoside hydrolase family 43 protein K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37]
D JG479_06535 NAD-dependent epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D JG479_07060 glk; (GenBank) glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D JG479_08285 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D JG479_02560 galU; (GenBank) UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D JG479_04295 galU; (GenBank) UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D JG479_06525 galU; (GenBank) UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D JG479_14250 galU; (GenBank) UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D JG479_02410 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D JG479_02565 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D JG479_01070 galK; (GenBank) galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D JG479_01075 UDP-glucose--hexose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D JG479_01080 galE; (GenBank) UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D JG479_02690 galE; (GenBank) UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D JG479_17420 glgC; (GenBank) glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D JG479_02375 rfbA; (GenBank) glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
C 00541 Biosynthesis of various nucleotide sugars [PATH:pslc00541]
D JG479_16460 glmU; (GenBank) bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D JG479_02930 KpsF/GutQ family sugar-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D JG479_10700 kdsA; (GenBank) 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D JG479_02925 kdsC; (GenBank) 3-deoxy-manno-octulosonate-8-phosphatase KdsC K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D JG479_08395 kdsB; (GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D JG479_12690 SIS domain-containing protein K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D JG479_12655 gmhB; (GenBank) D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D JG479_12685 hldE; (GenBank) bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D JG479_02560 galU; (GenBank) UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D JG479_04295 galU; (GenBank) UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D JG479_06525 galU; (GenBank) UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D JG479_14250 galU; (GenBank) UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D JG479_02410 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D JG479_02565 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D JG479_02375 rfbA; (GenBank) glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D JG479_02390 rfbB; (GenBank) dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D JG479_02380 rfbC; (GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D JG479_02385 rfbD; (GenBank) dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D JG479_00560 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:pslc00511]
D JG479_13070 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
C 00540 Lipopolysaccharide biosynthesis [PATH:pslc00540]
D JG479_05265 lpxA; (GenBank) acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D JG479_03180 lpxC; (GenBank) UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D JG479_05255 lpxD; (GenBank) UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D JG479_05030 UDP-2,3-diacylglucosamine diphosphatase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D JG479_05300 lpxB; (GenBank) lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D JG479_08405 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D JG479_12695 waaA; (GenBank) lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D JG479_13875 lpxL; (GenBank) LpxL/LpxP family Kdo(2)-lipid IV(A) lauroyl/palmitoleoyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D JG479_01520 phosphoethanolamine--lipid A transferase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D JG479_15545 phosphoethanolamine--lipid A transferase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D JG479_10240 acyloxyacyl hydrolase K12976 pagL; lipid A 3-O-deacylase [EC:3.1.1.-]
D JG479_12665 3-deoxy-D-manno-octulosonic acid kinase K11211 kdkA; 3-deoxy-D-manno-octulosonic acid kinase [EC:2.7.1.166]
C 00542 O-Antigen repeat unit biosynthesis [PATH:pslc00542]
D JG479_02345 wecA; (GenBank) UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00550 Peptidoglycan biosynthesis [PATH:pslc00550]
D JG479_02970 murA; (GenBank) UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D JG479_00590 murB; (GenBank) UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D JG479_03155 murC; (GenBank) UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D JG479_03140 murD; (GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D JG479_03125 murE; (GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D JG479_03160 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D JG479_03130 murF; (GenBank) UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D JG479_05225 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D JG479_12570 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D JG479_01710 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D JG479_03135 mraY; (GenBank) phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D JG479_03150 murG; (GenBank) undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D JG479_01775 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D JG479_12215 mrcB; (GenBank) penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D JG479_03145 ftsW; (GenBank) cell division protein FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D JG479_10950 rodA; (GenBank) rod shape-determining protein RodA K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D JG479_10945 mrdA; (GenBank) penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D JG479_03120 peptidoglycan glycosyltransferase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D JG479_10960 serine hydrolase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D JG479_13600 pbp4b; (GenBank) penicillin binding protein PBP4B K21469 pbp4b; serine-type D-Ala-D-Ala carboxypeptidase [EC:3.4.16.4]
C 00552 Teichoic acid biosynthesis [PATH:pslc00552]
D JG479_12570 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D JG479_01710 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D JG479_02345 wecA; (GenBank) UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
D JG479_02345 wecA; (GenBank) UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00543 Exopolysaccharide biosynthesis [PATH:pslc00543]
D JG479_06595 undecaprenyl-phosphate glucose phosphotransferase K03606 wcaJ; undecaprenyl-phosphate glucose phosphotransferase [EC:2.7.8.31]
D JG479_02345 wecA; (GenBank) UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D JG479_03855 cysE; (GenBank) serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D JG479_06570 hypothetical protein K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D JG479_02320
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:pslc00730]
D JG479_02740 thiC; (GenBank) phosphomethylpyrimidine synthase ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D JG479_02760 thiE; (GenBank) thiamine phosphate synthase K14153 thiDE; hydroxymethylpyrimidine kinase / phosphomethylpyrimidine kinase / thiamine-phosphate diphosphorylase [EC:2.7.1.49 2.7.4.7 2.5.1.3]
D JG479_02205 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D JG479_10190 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D JG479_04025 thiI; (GenBank) tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D JG479_02745 FAD-dependent oxidoreductase K03153 thiO; glycine oxidase [EC:1.4.3.19]
D JG479_12810 dxs; (GenBank) 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D JG479_02755 thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10]
D JG479_12825 thiL; (GenBank) thiamine-phosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D JG479_02775 rsgA; (GenBank) small ribosomal subunit biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D JG479_16330 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D JG479_16335 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D JG479_17070 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D JG479_09890 adk; (GenBank) adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:pslc00740]
D JG479_13535 GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D JG479_12840 ribB; (GenBank) 3,4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D JG479_12850 ribD; (GenBank) bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D JG479_16040 HAD-IA family hydrolase K20862 yigB; FMN hydrolase / 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.102 3.1.3.104]
D JG479_09715 ribB; (GenBank) 3,4-dihydroxy-2-butanone-4-phosphate synthase K02858 ribB; 3,4-dihydroxy 2-butanone 4-phosphate synthase [EC:4.1.99.12]
D JG479_12835 ribE; (GenBank) 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D JG479_08805 riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D JG479_12845 riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D JG479_11610 ribF; (GenBank) bifunctional riboflavin kinase/FAD synthetase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D JG479_15965 fre; (GenBank) NAD(P)H-flavin reductase K05368 fre; NAD(P)H-flavin reductase [EC:1.5.1.41]
D JG479_13865 NUDIX domain-containing protein K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D JG479_08575 NUDIX hydrolase K12152 nudJ; phosphatase NudJ [EC:3.6.1.-]
D JG479_12555 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00750 Vitamin B6 metabolism [PATH:pslc00750]
D JG479_03930 pdxH; (GenBank) pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D JG479_12980 epd; (GenBank) erythrose-4-phosphate dehydrogenase K03472 epd; D-erythrose 4-phosphate dehydrogenase [EC:1.2.1.72]
D JG479_04970 4-phosphoerythronate dehydrogenase K03473 pdxB; erythronate-4-phosphate dehydrogenase [EC:1.1.1.290]
D JG479_07440 serC; (GenBank) 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D JG479_02600 pdxA; (GenBank) 4-hydroxythreonine-4-phosphate dehydrogenase PdxA K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D JG479_04230 pdxJ; (GenBank) pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D JG479_12865 thrC; (GenBank) threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:pslc00760]
D JG479_04180 nadB; (GenBank) L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D JG479_06140 nadA; (GenBank) quinolinate synthase NadA K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D JG479_14355 nadC; (GenBank) carboxylating nicotinate-nucleotide diphosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D JG479_19780 deoD; (GenBank) purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D JG479_11720 metallophosphoesterase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D JG479_18000 bifunctional UDP-sugar hydrolase/5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D JG479_12405 surE; (GenBank) 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D JG479_10930 nadD; (GenBank) nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D JG479_04250 mazG; (GenBank) nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D JG479_16125 nadE; (GenBank) ammonia-dependent NAD(+) synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D JG479_12375 nicotinamide-nucleotide amidohydrolase family protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D JG479_19210 sirtuin K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D JG479_09780 nadK; (GenBank) NAD(+) kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D JG479_00685 sthA; (GenBank) Si-specific NAD(P)(+) transhydrogenase K00322 sthA; NAD(P) transhydrogenase [EC:1.6.1.1]
D JG479_02235 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D JG479_03610 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:pslc00770]
D JG479_01525 acetolactate synthase 2 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D JG479_17230 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D JG479_17235 ilvN; (GenBank) acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D JG479_01530 ilvM; (GenBank) acetolactate synthase 2 small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D JG479_04810 ilvC; (GenBank) ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D JG479_01535 ilvD; (GenBank) dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D JG479_12940 panB; (GenBank) 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D JG479_04030 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D JG479_12945 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D JG479_00600 type III pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D JG479_14160 coaBC; (GenBank) bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D JG479_04250 mazG; (GenBank) nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D JG479_04015 coaD; (GenBank) pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D JG479_14380 coaE; (GenBank) dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D JG479_09615 4'-phosphopantetheinyl transferase superfamily protein K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-]
D JG479_03395 DUF479 domain-containing protein K08682 acpH; acyl carrier protein phosphodiesterase [EC:3.1.4.14]
D JG479_09345 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D JG479_12530 panP; (GenBank) putative pyridoxal-dependent aspartate 1-decarboxylase K24264 panP; aspartate 1-decarboxylase [EC:4.1.1.11]
D JG479_09495 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00780 Biotin metabolism [PATH:pslc00780]
D JG479_08125 methyltransferase domain-containing protein K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197]
D JG479_11360 fabB; (GenBank) beta-ketoacyl-ACP synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D JG479_06465 fabF; (GenBank) beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D JG479_06455 fabG; (GenBank) 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D JG479_07640 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D JG479_05260 fabZ; (GenBank) 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D JG479_15670 bioH; (GenBank) pimeloyl-ACP methyl ester esterase BioH K02170 bioH; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85]
D JG479_08130 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D JG479_08140 bioA; (GenBank) adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D JG479_08120 bioD; (GenBank) dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D JG479_08135 bioB; (GenBank) biotin synthase BioB K01012 bioB; biotin synthase [EC:2.8.1.6]
D JG479_00595 birA; (GenBank) bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:pslc00785]
D JG479_10970 lipB; (GenBank) lipoyl(octanoyl) transferase LipB K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D JG479_10975 lipA; (GenBank) lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D JG479_04340 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JG479_14325 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JG479_14335 aceE; (GenBank) pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D JG479_14330 aceF; (GenBank) pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D JG479_08345 sucA; (GenBank) 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D JG479_08340 odhB; (GenBank) 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D JG479_08275 thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D JG479_08270 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D JG479_08265 dihydrolipoyllysine-residue acetyltransferase K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D JG479_03330 gcvP; (GenBank) aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D JG479_03320 gcvT; (GenBank) glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D JG479_03325 gcvH; (GenBank) glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:pslc00790]
D JG479_16135 folE; (GenBank) GTP cyclohydrolase I FolE K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D JG479_13440 GTP cyclohydrolase I FolE2 K09007 folE2; GTP cyclohydrolase IB [EC:3.5.4.16]
D JG479_16330 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D JG479_16335 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D JG479_17070 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D JG479_06200 alkaline phosphatase family protein K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D JG479_17315 alkaline phosphatase D family protein K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D JG479_12580 folB; (GenBank) dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D JG479_12575 folK; (GenBank) 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D JG479_12935 folK; (GenBank) 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D JG479_04920 folP; (GenBank) dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D JG479_14260 folA; (GenBank) type 3 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D JG479_04995 folC; (GenBank) bifunctional tetrahydrofolate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D JG479_13535 GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D JG479_12840 ribB; (GenBank) 3,4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D JG479_10050 pabB; (GenBank) aminodeoxychorismate synthase component I K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85]
D JG479_06470 pabC; (GenBank) aminodeoxychorismate lyase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D JG479_16140 folX; (GenBank) dihydroneopterin triphosphate 2'-epimerase K07589 folX; D-erythro-7,8-dihydroneopterin triphosphate epimerase [EC:5.1.99.7]
D JG479_16130 folM; (GenBank) dihydromonapterin reductase K13938 folM; dihydromonapterin reductase / dihydrofolate reductase [EC:1.5.1.50 1.5.1.3]
D JG479_05175 4a-hydroxytetrahydrobiopterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D JG479_05170 phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
D JG479_10285 queE; (GenBank) 7-carboxy-7-deazaguanine synthase QueE K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D JG479_10290 queC; (GenBank) 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D JG479_05520 queF; (GenBank) NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D JG479_09180 moaA; (GenBank) GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D JG479_17860 moaA; (GenBank) GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D JG479_09165 moaC; (GenBank) cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D JG479_09155 moaE; (GenBank) molybdopterin synthase catalytic subunit MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D JG479_09170 moaB; (GenBank) molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D JG479_09230 molybdopterin molybdotransferase MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D JG479_09175 molybdenum cofactor guanylyltransferase K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
D JG479_17875
C 00670 One carbon pool by folate [PATH:pslc00670]
D JG479_14260 folA; (GenBank) type 3 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D JG479_16130 folM; (GenBank) dihydromonapterin reductase K13938 folM; dihydromonapterin reductase / dihydrofolate reductase [EC:1.5.1.50 1.5.1.3]
D JG479_05045 folD; (GenBank) bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D JG479_12860 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D JG479_14525 purH; (GenBank) bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D JG479_03320 gcvT; (GenBank) glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D JG479_12015 metH; (GenBank) methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D JG479_12020 homocysteine S-methyltransferase family protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D JG479_04290 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D JG479_12345 purU; (GenBank) formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D JG479_12515 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
D JG479_12505 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D JG479_03330 gcvP; (GenBank) aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D JG479_04340 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JG479_14325 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JG479_03325 gcvH; (GenBank) glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D JG479_17515 betA; (GenBank) choline dehydrogenase K00108 betA; choline dehydrogenase [EC:1.1.99.1]
D JG479_17510 betB; (GenBank) betaine-aldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:pslc00860]
D JG479_03805 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D JG479_10735 hemA; (GenBank) glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D JG479_12205 hemL; (GenBank) glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D JG479_00455 hemB; (GenBank) porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D JG479_15995 hemC; (GenBank) hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D JG479_00680 hemE; (GenBank) uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D JG479_00145 hemF; (GenBank) oxygen-dependent coproporphyrinogen oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D JG479_01625 hemN; (GenBank) oxygen-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D JG479_12195 CopD family protein K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-]
D JG479_19715 ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D JG479_15990 uroporphyrinogen-III synthase K13543 hemDX; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75]
D JG479_01195 cobA; (GenBank) uroporphyrinogen-III C-methyltransferase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4]
D JG479_09110 cobA; (GenBank) uroporphyrinogen-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D JG479_12070 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D JG479_15750 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D JG479_15755 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D JG479_13730 cobO; (GenBank) cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D JG479_13735 cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D JG479_13455 ampE; (GenBank) regulatory signaling modulator protein AmpE K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D JG479_16645 DUF2470 domain-containing protein K07226 hutZ; heme oxygenase (biliverdin-IX-beta and delta-forming) [EC:1.14.99.58]
D JG479_18310 bfr; (GenBank) bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1]
D JG479_18315 bfr; (GenBank) bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:pslc00130]
D JG479_12625 chorismate lyase K03181 ubiC; chorismate lyase [EC:4.1.3.40]
D JG479_12620 ubiA; (GenBank) 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D JG479_15960 ubiD; (GenBank) 4-hydroxy-3-polyprenylbenzoate decarboxylase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98]
D JG479_12555 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D JG479_13330 FAD-dependent monooxygenase K18800 ubiI; 2-polyprenylphenol 6-hydroxylase [EC:1.14.13.240]
D JG479_07430 ubiG; (GenBank) bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
D JG479_13335 ubiH; (GenBank) 2-octaprenyl-6-methoxyphenyl hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
D JG479_00500 ubiE; (GenBank) bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D JG479_10825 FAD-dependent monooxygenase K03184 ubiF; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60]
D JG479_15800 PaaI family thioesterase K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28]
D JG479_10220 wrbA; (GenBank) NAD(P)H:quinone oxidoreductase K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D JG479_11725 hppD; (GenBank) 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:pslc00900]
D JG479_12810 dxs; (GenBank) 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D JG479_05235 ispC; (GenBank) 1-deoxy-D-xylulose-5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D JG479_12420 ispD; (GenBank) 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D JG479_10745 ispE; (GenBank) 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D JG479_12415 ispF; (GenBank) 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D JG479_19445 ispG; (GenBank) flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D JG479_11590 ispH; (GenBank) 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D JG479_07610 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JG479_12555 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D JG479_12805 ispA; (GenBank) (2E,6E)-farnesyl diphosphate synthase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D JG479_14280 ispB; (GenBank) octaprenyl diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D JG479_05225 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
D JG479_09495 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00907 Pinene, camphor and geraniol degradation [PATH:pslc00907]
D JG479_00055 fadB; (GenBank) fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D JG479_11290 fadJ; (GenBank) fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D JG479_07580 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D JG479_00050 fadA; (GenBank) acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D JG479_11295 fadI; (GenBank) acetyl-CoA C-acyltransferase FadI K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D JG479_08925 tkt; (GenBank) transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D JG479_12500 tkt; (GenBank) transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
D JG479_16100 MBL fold metallo-hydrolase K05555 actIV; cyclase [EC:4.-.-.-]
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:pslc00523]
D JG479_02375 rfbA; (GenBank) glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D JG479_02390 rfbB; (GenBank) dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D JG479_02380 rfbC; (GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D JG479_02385 rfbD; (GenBank) dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
D JG479_02390 rfbB; (GenBank) dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:pslc00946]
D JG479_08840 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D JG479_08860 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D JG479_09290 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D JG479_09430 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D JG479_09300 beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D JG479_09435 beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
D JG479_16105 penicillin acylase family protein K01434 pac; penicillin G amidase [EC:3.5.1.11]
C 00332 Carbapenem biosynthesis [PATH:pslc00332]
D JG479_03795 proB; (GenBank) glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D JG479_14865 proB; (GenBank) glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D JG479_14860 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:pslc00261]
D JG479_01185 cysN; (GenBank) sulfate adenylyltransferase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D JG479_02540 cysN; (GenBank) sulfate adenylyltransferase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D JG479_01190 cysD; (GenBank) sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D JG479_02535 cysD; (GenBank) sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D JG479_09620 lysC; (GenBank) lysine-sensitive aspartokinase 3 K00928 lysC; aspartate kinase [EC:2.7.2.4]
D JG479_13515 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D JG479_12875 thrA; (GenBank) bifunctional aspartate kinase/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D JG479_01770 metL; (GenBank) bifunctional aspartate kinase/homoserine dehydrogenase II K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
D JG479_04975 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D JG479_16915 asd; (GenBank) aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D JG479_00860 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D JG479_06165 dihydrodipicolinate synthase family protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D JG479_17560 dapA; (GenBank) 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D JG479_09740 dapB; (GenBank) 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:pslc00521]
D JG479_07060 glk; (GenBank) glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D JG479_08285 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D JG479_14620 suhB; (GenBank) inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D JG479_02375 rfbA; (GenBank) glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D JG479_02390 rfbB; (GenBank) dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D JG479_02380 rfbC; (GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D JG479_02385 rfbD; (GenBank) dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D JG479_07060 glk; (GenBank) glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:pslc00525]
D JG479_02375 rfbA; (GenBank) glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D JG479_02390 rfbB; (GenBank) dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:pslc00401]
D JG479_11465 tyrA; (GenBank) bifunctional chorismate mutase/prephenate dehydrogenase K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12]
D JG479_11430 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D JG479_17115 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
D JG479_00915 tryptophan 7-halogenase K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9]
D JG479_07025 tryptophan 7-halogenase K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9]
D JG479_08850 tryptophan 7-halogenase K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9]
D JG479_09010 tryptophan 7-halogenase K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9]
D JG479_09420 tryptophan 7-halogenase K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9]
D JG479_09425 tryptophan 7-halogenase K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9]
C 00405 Phenazine biosynthesis
D JG479_06720 anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D JG479_01110 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D JG479_06715 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D JG479_06450 fabD; (GenBank) ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D JG479_06455 fabG; (GenBank) 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D JG479_07640 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D JG479_06460 acpP; (GenBank) acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:pslc00999]
D JG479_12505 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D JG479_00155 aroE; (GenBank) shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D JG479_08840 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D JG479_08860 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D JG479_09290 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D JG479_09430 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D JG479_09300 beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D JG479_09435 beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:pslc00362]
D JG479_00050 fadA; (GenBank) acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D JG479_11295 fadI; (GenBank) acetyl-CoA C-acyltransferase FadI K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D JG479_02230 fdx; (GenBank) ISC system 2Fe-2S type ferredoxin K04755 fdx; ferredoxin, 2Fe-2S
D JG479_11290 fadJ; (GenBank) fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D JG479_00055 fadB; (GenBank) fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D JG479_13480 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D JG479_07610 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation [PATH:pslc00627]
D JG479_17550 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D JG479_18840 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D JG479_12555 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00364 Fluorobenzoate degradation [PATH:pslc00364]
D JG479_09685 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D JG479_11815 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00625 Chloroalkane and chloroalkene degradation [PATH:pslc00625]
D JG479_17010 adhP; (GenBank) alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D JG479_07210 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D JG479_09495 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JG479_06335 haloacid dehalogenase type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
D JG479_16675 haloacid dehalogenase type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:pslc00361]
D JG479_09685 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D JG479_11815 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D JG479_06335 haloacid dehalogenase type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
D JG479_16675 haloacid dehalogenase type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00623 Toluene degradation [PATH:pslc00623]
D JG479_09685 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D JG479_11815 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation [PATH:pslc00633]
D JG479_06185 alkene reductase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-]
D JG479_10875 alkene reductase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-]
D JG479_13175 alkene reductase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-]
C 00642 Ethylbenzene degradation
D JG479_00050 fadA; (GenBank) acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D JG479_11295 fadI; (GenBank) acetyl-CoA C-acyltransferase FadI K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation [PATH:pslc00643]
D JG479_18035 homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D JG479_18040 maiA; (GenBank) maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2]
D JG479_11730 fahA; (GenBank) fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
D JG479_17550 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D JG479_18840 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00791 Atrazine degradation
C 00930 Caprolactam degradation [PATH:pslc00930]
D JG479_08975 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
D JG479_00055 fadB; (GenBank) fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D JG479_11290 fadJ; (GenBank) fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation [PATH:pslc00626]
D JG479_17010 adhP; (GenBank) alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D JG479_07210 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation [PATH:pslc00984]
D JG479_00050 fadA; (GenBank) acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D JG479_11295 fadI; (GenBank) acetyl-CoA C-acyltransferase FadI K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:pslc03020]
D JG479_01245 rpoB; (GenBank) DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D JG479_01250 rpoC; (GenBank) DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D JG479_15155 rpoA; (GenBank) DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D JG479_00970 rpoZ; (GenBank) DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:pslc03010]
D JG479_00170 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D JG479_01295 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D JG479_01445 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D JG479_05890 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D JG479_12765 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D JG479_15145 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D JG479_15890 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D JG479_16440 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D JG479_19260 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D JG479_00185 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D JG479_01300 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D JG479_01460 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D JG479_05895 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D JG479_12760 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D JG479_15140 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D JG479_15885 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D JG479_16435 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D JG479_19255 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D JG479_00190 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D JG479_01305 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D JG479_01465 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D JG479_05900 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D JG479_12750 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D JG479_12755 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D JG479_15135 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D JG479_15880 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D JG479_16430 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D JG479_19250 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D JG479_07455 rpsA; (GenBank) 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D JG479_05205 rpsB; (GenBank) 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D JG479_14940 rpsC; (GenBank) 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D JG479_15160 rpsD; (GenBank) 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D JG479_15195 rpsE; (GenBank) 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D JG479_13310 rpsF; (GenBank) 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D JG479_01260 rpsG; (GenBank) 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D JG479_15210 rpsH; (GenBank) 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D JG479_03000 rpsI; (GenBank) 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D JG479_14975 rpsJ; (GenBank) 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D JG479_15165 rpsK; (GenBank) 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D JG479_01255 rpsL; (GenBank) 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D JG479_15170 rpsM; (GenBank) 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D JG479_15215 rpsN; (GenBank) 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D JG479_11090 rpsO; (GenBank) 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D JG479_11485 rpsP; (GenBank) 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D JG479_14925 rpsQ; (GenBank) 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D JG479_13300 rpsR; (GenBank) 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D JG479_14950 rpsS; (GenBank) 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D JG479_11620 rpsT; (GenBank) 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D JG479_14490 rpsU; (GenBank) 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D JG479_01230 rplA; (GenBank) 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D JG479_14955 rplB; (GenBank) 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D JG479_14970 rplC; (GenBank) 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D JG479_14965 rplD; (GenBank) 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D JG479_15220 rplE; (GenBank) 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D JG479_15205 rplF; (GenBank) 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D JG479_13295 rplI; (GenBank) 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D JG479_01235 rplJ; (GenBank) 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D JG479_01225 rplK; (GenBank) 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D JG479_01240 rplL; (GenBank) 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D JG479_02995 rplM; (GenBank) 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D JG479_15230 rplN; (GenBank) 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D JG479_15185 rplO; (GenBank) 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D JG479_14935 rplP; (GenBank) 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D JG479_15150 rplQ; (GenBank) 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D JG479_15200 rplR; (GenBank) 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D JG479_11470 rplS; (GenBank) 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D JG479_07275 rplT; (GenBank) 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D JG479_14275 rplU; (GenBank) 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D JG479_14945 rplV; (GenBank) 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D JG479_14960 rplW; (GenBank) 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D JG479_15225 rplX; (GenBank) 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D JG479_10755 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25
D JG479_14270 rpmA; (GenBank) 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D JG479_14150 rpmB; (GenBank) 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D JG479_14930 rpmC; (GenBank) 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D JG479_15190 rpmD; (GenBank) 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D JG479_01750 rpmE; (GenBank) 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D JG479_17630 type B 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D JG479_06440 rpmF; (GenBank) 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D JG479_14145 rpmG; (GenBank) 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D JG479_16555 rpmH; (GenBank) 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D JG479_07270 rpmI; (GenBank) 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D JG479_15175 rpmJ; (GenBank) 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D JG479_17635 ykgO; (GenBank) type B 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
C 00970 Aminoacyl-tRNA biosynthesis [PATH:pslc00970]
D JG479_00180 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D JG479_01455 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D JG479_10520 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D JG479_14840 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D JG479_04325 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D JG479_05055 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D JG479_13240 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D JG479_13610 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D JG479_13615 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D JG479_13620 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D JG479_13625 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D JG479_10330 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D JG479_10335 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D JG479_10340 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D JG479_10345 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D JG479_05605 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D JG479_05610 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D JG479_05615 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D JG479_05620 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D JG479_05625 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D JG479_05630 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D JG479_05635 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D JG479_05845 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D JG479_05870 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D JG479_10780 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D JG479_10795 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D JG479_10805 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D JG479_10815 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D JG479_10485 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D JG479_10490 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D JG479_10495 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D JG479_10500 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D JG479_10505 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D JG479_10510 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D JG479_10515 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D JG479_00615 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D JG479_02785 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D JG479_02790 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D JG479_02795 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D JG479_05840 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D JG479_05855 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D JG479_05865 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D JG479_02270 tRNA-His K14226 tRNA-His; tRNA His
D JG479_05060 tRNA-His K14226 tRNA-His; tRNA His
D JG479_00175 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D JG479_01450 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D JG479_03490 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JG479_04940 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JG479_05850 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JG479_05860 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JG479_05875 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JG479_10775 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JG479_10790 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JG479_10800 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JG479_10810 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JG479_06100 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D JG479_06105 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D JG479_06110 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D JG479_06115 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D JG479_06120 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D JG479_06125 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D JG479_06130 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D JG479_06135 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D JG479_10770 tRNA-Met K14230 tRNA-Met; tRNA Met
D JG479_10785 tRNA-Met K14230 tRNA-Met; tRNA Met
D JG479_11120 tRNA-Met K14230 tRNA-Met; tRNA Met
D JG479_14590 tRNA-Ile K14230 tRNA-Met; tRNA Met
D JG479_15075 tRNA-Met K14230 tRNA-Met; tRNA Met
D JG479_15080 tRNA-Met K14230 tRNA-Met; tRNA Met
D JG479_15085 tRNA-Met K14230 tRNA-Met; tRNA Met
D JG479_13375 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D JG479_13385 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D JG479_13395 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D JG479_05050 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D JG479_05065 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D JG479_05070 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D JG479_06035 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D JG479_00315 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D JG479_00320 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D JG479_06145 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D JG479_07350 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D JG479_08535 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D JG479_08540 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D JG479_13630 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D JG479_00605 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D JG479_00620 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D JG479_13370 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D JG479_13380 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D JG479_13390 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D JG479_01210 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D JG479_03880 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D JG479_00610 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D JG479_10110 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D JG479_10115 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D JG479_08820 tRNA-Val K14237 tRNA-Val; tRNA Val
D JG479_08825 tRNA-Val K14237 tRNA-Val; tRNA Val
D JG479_10525 tRNA-Val K14237 tRNA-Val; tRNA Val
D JG479_10530 tRNA-Val K14237 tRNA-Val; tRNA Val
D JG479_10535 tRNA-Val K14237 tRNA-Val; tRNA Val
D JG479_10540 tRNA-Val K14237 tRNA-Val; tRNA Val
D JG479_10545 tRNA-Val K14237 tRNA-Val; tRNA Val
D JG479_10550 tRNA-Val K14237 tRNA-Val; tRNA Val
D JG479_10555 tRNA-Val K14237 tRNA-Val; tRNA Val
D JG479_03805 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D JG479_08320 glnS; (GenBank) glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D JG479_13520 alaS; (GenBank) alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D JG479_05710 aspS; (GenBank) aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D JG479_08185 asnS; (GenBank) asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D JG479_00025 glyQ; (GenBank) glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D JG479_00030 glyS; (GenBank) glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D JG479_07260 thrS; (GenBank) threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D JG479_08695 serS; (GenBank) serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D JG479_05040 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D JG479_06830 metG; (GenBank) methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D JG479_00110 fmt; (GenBank) methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D JG479_13210 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D JG479_10915 leuS; (GenBank) leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D JG479_11605 ileS; (GenBank) isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D JG479_13640 lysS; (GenBank) lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D JG479_03925 argS; (GenBank) arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D JG479_08220 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D JG479_19450 hisS; (GenBank) histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D JG479_05915 pheS; (GenBank) phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D JG479_05920 pheT; (GenBank) phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D JG479_13460 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D JG479_01845 trpS; (GenBank) tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes [PATH:pslc03008]
D JG479_04215 rnc; (GenBank) ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D JG479_02780 orn; (GenBank) oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D JG479_11860 serine protein kinase RIO K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1]
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:pslc03060]
D JG479_15180 secY; (GenBank) preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D JG479_01215 secE; (GenBank) preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D JG479_04935 secG; (GenBank) preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D JG479_07120 secD; (GenBank) protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D JG479_14640 secD; (GenBank) protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D JG479_07125 secF; (GenBank) protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D JG479_14635 secF; (GenBank) protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D JG479_14645 yajC; (GenBank) preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D JG479_16540 yidC; (GenBank) membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D JG479_01660 secA; (GenBank) preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D JG479_14430 secB; (GenBank) protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D JG479_11490 ffh; (GenBank) signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D JG479_05350 ffs; (GenBank) signal recognition particle sRNA small type K01983 ffs; signal recognition particle 4.5S RNA
D JG479_14480 ftsY; (GenBank) signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D JG479_00485 tatA; (GenBank) Sec-independent protein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA
D JG479_00480 tatB; (GenBank) Sec-independent protein translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB
D JG479_00475 tatC; (GenBank) twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
D JG479_04210 lepB; (GenBank) signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D JG479_06810 lepB; (GenBank) signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D JG479_11600 lspA; (GenBank) signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
D JG479_09895 htpG; (GenBank) molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:pslc04122]
D JG479_02205 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D JG479_10190 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D JG479_14075 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D JG479_00045 tusA; (GenBank) sulfurtransferase TusA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D JG479_08560 tRNA 2-thiouridine-synthesizing protein K07237 tusB; tRNA 2-thiouridine synthesizing protein B
D JG479_08555 tusC; (GenBank) sulfurtransferase complex subunit TusC K07236 tusC; tRNA 2-thiouridine synthesizing protein C
D JG479_08550 tusD; (GenBank) sulfurtransferase complex subunit TusD K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
D JG479_08565 TusE/DsrC/DsvC family sulfur relay protein K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
D JG479_08580 mnmA; (GenBank) tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D JG479_09155 moaE; (GenBank) molybdopterin synthase catalytic subunit MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D JG479_09180 moaA; (GenBank) GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D JG479_17860 moaA; (GenBank) GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D JG479_09160 MoaD/ThiS family protein K03636 moaD; sulfur-carrier protein
D JG479_02765 HesA/MoeB/ThiF family protein K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D JG479_09210 moeB; (GenBank) molybdopterin-synthase adenylyltransferase MoeB K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D JG479_09165 moaC; (GenBank) cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D JG479_09170 moaB; (GenBank) molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D JG479_04025 thiI; (GenBank) tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D JG479_02750 thiS; (GenBank) sulfur carrier protein ThiS K03154 thiS; sulfur carrier protein
C 03050 Proteasome
C 03018 RNA degradation [PATH:pslc03018]
D JG479_04270 rppH; (GenBank) RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D JG479_06410 rne; (GenBank) ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D JG479_15900 rhlB; (GenBank) ATP-dependent RNA helicase RhlB K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
D JG479_04260 eno; (GenBank) phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D JG479_11085 pnp; (GenBank) polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D JG479_03830 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D JG479_16400 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D JG479_17555 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D JG479_03295 rnr; (GenBank) ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D JG479_11185 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D JG479_13780 recQ; (GenBank) DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D JG479_19605 RecQ family ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D JG479_15910 rho; (GenBank) transcription termination factor Rho K03628 rho; transcription termination factor Rho
D JG479_17945 dnaK; (GenBank) molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D JG479_00995 groL; (GenBank) chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D JG479_14900 hfq; (GenBank) RNA chaperone Hfq K03666 hfq; host factor-I protein
D JG479_12930 pcnB; (GenBank) polynucleotide adenylyltransferase PcnB K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:pslc03030]
D JG479_05415 VRR-NUC domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D JG479_07505 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D JG479_12995 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D JG479_05310 dnaE; (GenBank) DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D JG479_09920 dnaX; (GenBank) DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D JG479_06485 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D JG479_10925 holA; (GenBank) DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D JG479_13205 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D JG479_00010 dnaN; (GenBank) DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D JG479_13275 dnaB; (GenBank) replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D JG479_14500 dnaG; (GenBank) DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D JG479_02005 ssb; (GenBank) single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D JG479_05305 rnhB; (GenBank) ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D JG479_01590 polA; (GenBank) DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D JG479_10580 ligA; (GenBank) NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:pslc03410]
D JG479_10390 nth; (GenBank) endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D JG479_13720 ung; (GenBank) uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D JG479_13410 mutY; (GenBank) A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D JG479_14130 mutM; (GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D JG479_18270 DNA-3-methyladenine glycosylase 2 family protein K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D JG479_04515 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D JG479_06955 xthA; (GenBank) exodeoxyribonuclease III K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2]
D JG479_01590 polA; (GenBank) DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D JG479_13650 recJ; (GenBank) single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D JG479_10580 ligA; (GenBank) NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:pslc03420]
D JG479_06315 mfd; (GenBank) transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D JG479_01865 uvrA; (GenBank) excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D JG479_18510 uvrA; (GenBank) excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D JG479_10320 uvrB; (GenBank) excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D JG479_15120 uvrD; (GenBank) DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D JG479_01590 polA; (GenBank) DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D JG479_10580 ligA; (GenBank) NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:pslc03430]
D JG479_12380 mutS; (GenBank) DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D JG479_14910 mutL; (GenBank) DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D JG479_04265 mutH; (GenBank) DNA mismatch repair endonuclease MutH K03573 mutH; DNA mismatch repair protein MutH
D JG479_15120 uvrD; (GenBank) DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D JG479_09590 sbcB; (GenBank) exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D JG479_03865 xseA; (GenBank) exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D JG479_12800 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D JG479_13650 recJ; (GenBank) single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D JG479_02005 ssb; (GenBank) single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D JG479_05310 dnaE; (GenBank) DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D JG479_00010 dnaN; (GenBank) DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D JG479_09920 dnaX; (GenBank) DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D JG479_10925 holA; (GenBank) DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D JG479_06485 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D JG479_05415 VRR-NUC domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D JG479_07505 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D JG479_12995 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D JG479_13205 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D JG479_10580 ligA; (GenBank) NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D JG479_01820 Dam family site-specific DNA-(adenine-N6)-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C 03440 Homologous recombination [PATH:pslc03440]
D JG479_13650 recJ; (GenBank) single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D JG479_02005 ssb; (GenBank) single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D JG479_00015 recF; (GenBank) DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF
D JG479_04225 recO; (GenBank) DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D JG479_09910 recR; (GenBank) recombination protein RecR K06187 recR; recombination protein RecR
D JG479_12370 recA; (GenBank) recombinase RecA K03553 recA; recombination protein RecA
D JG479_01590 polA; (GenBank) DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D JG479_06060 ruvA; (GenBank) Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D JG479_06065 ruvB; (GenBank) Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D JG479_06055 ruvC; (GenBank) crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D JG479_00935 recG; (GenBank) ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D JG479_06210 recB; (GenBank) exodeoxyribonuclease V subunit beta K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D JG479_06205 recC; (GenBank) exodeoxyribonuclease V subunit gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D JG479_06215 recD; (GenBank) exodeoxyribonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D JG479_05310 dnaE; (GenBank) DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D JG479_00010 dnaN; (GenBank) DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D JG479_09920 dnaX; (GenBank) DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D JG479_10925 holA; (GenBank) DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D JG479_06485 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D JG479_05415 VRR-NUC domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D JG479_07505 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D JG479_12995 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D JG479_13205 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D JG479_01745 priA; (GenBank) primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D JG479_13305 priB; (GenBank) primosomal replication protein N K02686 priB; primosomal replication protein N
D JG479_05445 primosomal replication protein K04067 priC; primosomal replication protein N''
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:pslc03250]
D JG479_12165 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D JG479_17990 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus and Alphavirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03273 Virion - Lassa virus and SFTS virus
C 03272 Virion - Hepatitis viruses
D JG479_03680 DPP IV N-terminal domain-containing protein K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
C 03266 Virion - Herpesvirus
D JG479_11265 insulinase family protein K01408 IDE; insulysin [EC:3.4.24.56]
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:pslc02010]
D JG479_09225 modA; (GenBank) molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D JG479_09220 modB; (GenBank) molybdate ABC transporter permease subunit K02018 modB; molybdate transport system permease protein
D JG479_09215 ATP-binding cassette domain-containing protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D JG479_01490 ATP-binding cassette domain-containing protein K05776 modF; molybdate transport system ATP-binding protein
D JG479_08150 extracellular solute-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D JG479_14310 Fe(3+) ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D JG479_08155 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D JG479_14305 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D JG479_08160 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D JG479_14300 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D JG479_07855 ABC transporter ATP-binding protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D JG479_07840 sugar ABC transporter substrate-binding protein K10227 smoE; polyol transport system substrate-binding protein
D JG479_07845 sugar ABC transporter permease K10228 smoF; polyol transport system permease protein
D JG479_07850 carbohydrate ABC transporter permease K10229 smoG; polyol transport system permease protein
D JG479_02955 ABC transporter substrate-binding protein K07323 mlaC; phospholipid transport system substrate-binding protein
D JG479_10235 ABC transporter substrate-binding protein K07323 mlaC; phospholipid transport system substrate-binding protein
D JG479_02950 mlaD; (GenBank) outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D JG479_02945 mlaE; (GenBank) lipid asymmetry maintenance ABC transporter permease subunit MlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D JG479_02960 STAS domain-containing protein K07122 mlaB; phospholipid transport system transporter-binding protein
D JG479_02940 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D JG479_18975 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D JG479_18985 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D JG479_18980 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D JG479_18990 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D JG479_12955 phosphate ABC transporter substrate-binding protein PstS family protein K02040 pstS; phosphate transport system substrate-binding protein
D JG479_14700 ABC transporter permease subunit K02037 pstC; phosphate transport system permease protein
D JG479_14695 pstA; (GenBank) phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D JG479_14690 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D JG479_05130 ABC transporter substrate-binding protein K19226 sapA; cationic peptide transport system substrate-binding protein
D JG479_05125 ABC transporter permease K19227 sapB; cationic peptide transport system permease protein
D JG479_05120 ABC transporter permease subunit K19228 sapC; cationic peptide transport system permease protein
D JG479_05115 ATP-binding cassette domain-containing protein K19229 sapD; cationic peptide transport system ATP-binding protein
D JG479_05110 ATP-binding cassette domain-containing protein K19230 sapF; cationic peptide transport system ATP-binding protein
D JG479_13725 cobalamin-binding protein K06858 btuF; vitamin B12 transport system substrate-binding protein
D JG479_02370 lipopolysaccharide biosynthesis protein K10107 kpsE; capsular polysaccharide transport system permease protein
D JG479_02360 ABC transporter permease K09688 kpsM; capsular polysaccharide transport system permease protein
D JG479_02365 ABC transporter ATP-binding protein K09689 kpsT; capsular polysaccharide transport system ATP-binding protein [EC:7.6.2.12]
D JG479_08235 ABC transporter permease K09696 natB; sodium transport system permease protein
D JG479_08240 ATP-binding cassette domain-containing protein K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D JG479_07220 lipoprotein-releasing ABC transporter permease subunit K09808 lolC_E_F; lipoprotein-releasing system permease protein
D JG479_07230 lipoprotein-releasing ABC transporter permease subunit K09808 lolC_E_F; lipoprotein-releasing system permease protein
D JG479_07225 lolD; (GenBank) lipoprotein-releasing ABC transporter ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D JG479_04700 ccmD; (GenBank) heme exporter protein CcmD K02196 ccmD; heme exporter protein D
D JG479_04695 heme ABC transporter permease K02195 ccmC; heme exporter protein C
D JG479_04690 ccmB; (GenBank) heme exporter protein CcmB K02194 ccmB; heme exporter protein B
D JG479_04685 ccmA; (GenBank) cytochrome c biogenesis heme-transporting ATPase CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D JG479_13195 lptF; (GenBank) LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein
D JG479_13190 lptG; (GenBank) LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein
D JG479_02910 lptB; (GenBank) LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D JG479_14470 ftsX; (GenBank) cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D JG479_14475 ftsE; (GenBank) cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D JG479_08410 msbA; (GenBank) lipid A export permease/ATP-binding protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D JG479_15015 peptidase domain-containing ABC transporter K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D JG479_07105 ABC transporter ATP-binding protein/permease K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
D JG479_08635 ABC transporter ATP-binding protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D JG479_04385 type I secretion system permease/ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D JG479_05275 cydC; (GenBank) thiol reductant ABC exporter subunit CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D JG479_05280 cydD; (GenBank) thiol reductant ABC exporter subunit CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
C 02060 Phosphotransferase system (PTS) [PATH:pslc02060]
D JG479_06920 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D JG479_04275 ptsP; (GenBank) phosphoenolpyruvate--protein phosphotransferase K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D JG479_02885 HPr family phosphocarrier protein K08485 ptsO; phosphocarrier protein NPr
D JG479_02895 ptsN; (GenBank) PTS IIA-like nitrogen regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
C 03070 Bacterial secretion system [PATH:pslc03070]
D JG479_13870 tolC; (GenBank) outer membrane channel protein TolC K12340 tolC; outer membrane protein
D JG479_01335 gspD; (GenBank) type II secretion system secretin GspD K02453 gspD; general secretion pathway protein D
D JG479_01330 gspC; (GenBank) type II secretion system protein GspC K02452 gspC; general secretion pathway protein C
D JG479_01345 gspF; (GenBank) type II secretion system inner membrane protein GspF K02455 gspF; general secretion pathway protein F
D JG479_01350 gspG; (GenBank) type II secretion system major pseudopilin GspG K02456 gspG; general secretion pathway protein G
D JG479_01355 prepilin-type N-terminal cleavage/methylation domain-containing protein K02457 gspH; general secretion pathway protein H
D JG479_01360 gspI; (GenBank) type II secretion system minor pseudopilin GspI K02458 gspI; general secretion pathway protein I
D JG479_01365 gspJ; (GenBank) type II secretion system minor pseudopilin GspJ K02459 gspJ; general secretion pathway protein J
D JG479_01370 gspK; (GenBank) type II secretion system minor pseudopilin GspK K02460 gspK; general secretion pathway protein K
D JG479_01375 gspL; (GenBank) type II secretion system protein GspL K02461 gspL; general secretion pathway protein L
D JG479_01380 type II secretion system protein M K02462 gspM; general secretion pathway protein M
D JG479_01340 gspE; (GenBank) type II secretion system ATPase GspE K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D JG479_07120 secD; (GenBank) protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D JG479_14640 secD; (GenBank) protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D JG479_07125 secF; (GenBank) protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D JG479_14635 secF; (GenBank) protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D JG479_01215 secE; (GenBank) preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D JG479_04935 secG; (GenBank) preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D JG479_15180 secY; (GenBank) preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D JG479_14645 yajC; (GenBank) preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D JG479_16540 yidC; (GenBank) membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D JG479_01660 secA; (GenBank) preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D JG479_14480 ftsY; (GenBank) signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D JG479_14430 secB; (GenBank) protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D JG479_11490 ffh; (GenBank) signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D JG479_00485 tatA; (GenBank) Sec-independent protein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA
D JG479_00480 tatB; (GenBank) Sec-independent protein translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB
D JG479_00475 tatC; (GenBank) twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:pslc02020]
D JG479_12960 phoR; (GenBank) phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D JG479_12965 phoB; (GenBank) phosphate regulon transcriptional regulator PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D JG479_16330 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D JG479_16335 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D JG479_17070 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D JG479_06200 alkaline phosphatase family protein K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D JG479_17315 alkaline phosphatase D family protein K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D JG479_12955 phosphate ABC transporter substrate-binding protein PstS family protein K02040 pstS; phosphate transport system substrate-binding protein
D JG479_09260 GHKL domain-containing protein K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D JG479_09255 response regulator transcription factor K07660 phoP; two-component system, OmpR family, response regulator PhoP
D JG479_15410 envZ; (GenBank) two-component system sensor histidine kinase EnvZ K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D JG479_15415 ompR; (GenBank) two-component system response regulator OmpR K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D JG479_14405 HAMP domain-containing protein K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D JG479_14400 response regulator K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D JG479_11870 HAMP domain-containing protein K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3]
D JG479_11865 response regulator K07664 baeR; two-component system, OmpR family, response regulator BaeR
D JG479_15490 heavy metal sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D JG479_15485 heavy metal response regulator transcription factor K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D JG479_14725 TolC family protein K07796 cusC; outer membrane protein, copper/silver efflux system
D JG479_14720 efflux RND transporter periplasmic adaptor subunit K07798 cusB; membrane fusion protein, copper/silver efflux system
D JG479_14715 efflux RND transporter permease subunit K07787 cusA; copper/silver efflux system protein
D JG479_04480 flagellin K02406 fliC; flagellin
D JG479_04485 flagellin K02406 fliC; flagellin
D JG479_04620 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
D JG479_04645 flagellar motor protein K02556 motA; chemotaxis protein MotA
D JG479_12795 pomA; (GenBank) flagellar motor protein PomA K02556 motA; chemotaxis protein MotA
D JG479_08875 DUF4118 domain-containing protein K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D JG479_08870 response regulator transcription factor K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D JG479_12240 response regulator K07647 torS; two-component system, OmpR family, sensor histidine kinase TorS [EC:2.7.13.3]
D JG479_13435 arcB; (GenBank) aerobic respiration two-component sensor histidine kinase ArcB K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D JG479_13430 arcA; (GenBank) two-component system response regulator ArcA K07773 arcA; two-component system, OmpR family, aerobic respiration control protein ArcA
D JG479_15755 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D JG479_00005 dnaA; (GenBank) chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D JG479_07945 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D JG479_11585 histidine kinase K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3]
D JG479_11580 response regulator transcription factor K08083 algR; two-component system, LytTR family, response regulator AlgR
D JG479_08240 ATP-binding cassette domain-containing protein K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D JG479_08235 ABC transporter permease K09696 natB; sodium transport system permease protein
D JG479_04235 barA; (GenBank) two-component sensor histidine kinase BarA K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D JG479_13510 csrA; (GenBank) carbon storage regulator CsrA K03563 csrA; carbon storage regulator
D JG479_04895 beta-lactamase family protein K01467 ampC; beta-lactamase class C [EC:3.5.2.6]
D JG479_03280 sensor histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D JG479_03285 response regulator transcription factor K07693 desR; two-component system, NarL family, response regulator DesR
D JG479_07895 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D JG479_07890 type II secretion system F family protein K12510 tadB; tight adherence protein B
D JG479_07885 secretion system protein K12511 tadC; tight adherence protein C
D JG479_05195 glnD; (GenBank) [protein-PII] uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D JG479_11540 glnB; (GenBank) nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1
D JG479_00785 glnL; (GenBank) nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D JG479_00780 ntrC; (GenBank) nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D JG479_00795 glnA; (GenBank) glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JG479_15010 short-chain fatty acid transporter K02106 atoE; short-chain fatty acids transporter
D JG479_07610 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JG479_17915 two-component sensor histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D JG479_17910 sigma-54-dependent Fis family transcriptional regulator K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
D JG479_02905 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D JG479_14360 pilin K02650 pilA; type IV pilus assembly protein PilA
D JG479_16220 pilin K02650 pilA; type IV pilus assembly protein PilA
D JG479_03730 HAMP domain-containing histidine kinase K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
D JG479_03740 sigma 54-interacting transcriptional regulator K07715 glrR; two-component system, NtrC family, response regulator GlrR
D JG479_04420 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D JG479_15715 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D JG479_01720 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JG479_02580 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JG479_03260 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JG479_03675 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JG479_04805 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JG479_04945 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JG479_06220 PAS domain S-box protein K03406 mcp; methyl-accepting chemotaxis protein
D JG479_11935 PAS domain-containing methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JG479_12210 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D JG479_12285 cache domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D JG479_15390 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JG479_15720 PAS domain S-box protein K03406 mcp; methyl-accepting chemotaxis protein
D JG479_16970 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JG479_18335 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JG479_19105 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JG479_19595 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JG479_11515 PAS domain S-box protein K03776 aer; aerotaxis receptor
D JG479_04660 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D JG479_04665 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D JG479_15725 purine-binding chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D JG479_04635 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D JG479_15730 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D JG479_04625 cheY; (GenBank) chemotaxis response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D JG479_07830 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D JG479_07870 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D JG479_11625 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D JG479_15735 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D JG479_17925 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D JG479_19205 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D JG479_04640 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D JG479_15705 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D JG479_04415 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D JG479_08170 response regulator K11443 divK; two-component system, cell cycle response regulator DivK
D JG479_11150 Hpt domain-containing protein K10911 luxU; two-component system, phosphorelay protein LuxU
D JG479_04510 sigma-54-dependent Fis family transcriptional regulator K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D JG479_04520 PAS domain-containing protein K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3]
D JG479_04525 sigma-54-dependent Fis family transcriptional regulator K10943 flrC; two-component system, response regulator FlrC
D JG479_09405 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D JG479_12745 glsB; (GenBank) glutaminase B K01425 glsA; glutaminase [EC:3.5.1.2]
D JG479_18190 HAMP domain-containing histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D JG479_18185 response regulator K15012 regA; two-component system, response regulator RegA
D JG479_03005 petA; (GenBank) ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D JG479_03010 cytochrome b N-terminal domain-containing protein K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D JG479_03015 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D JG479_14815 c-type cytochrome K08738 CYC; cytochrome c
D JG479_06285 ccoN; (GenBank) cytochrome-c oxidase, cbb3-type subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D JG479_06280 ccoO; (GenBank) cytochrome-c oxidase, cbb3-type subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D JG479_06275 CcoQ/FixQ family Cbb3-type cytochrome c oxidase assembly chaperone K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D JG479_06270 ccoP; (GenBank) cytochrome-c oxidase, cbb3-type subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D JG479_05295 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D JG479_05290 cydB; (GenBank) cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D JG479_05285 cydX; (GenBank) cytochrome bd-I oxidase subunit CydX K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7]
D JG479_13870 tolC; (GenBank) outer membrane channel protein TolC K12340 tolC; outer membrane protein
D JG479_02285 SLBB domain-containing protein K01991 wza; polysaccharide biosynthesis/export protein
D JG479_13550 low molecular weight phosphotyrosine protein phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D JG479_08835 glycoside hydrolase family 9 protein K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D JG479_17320 cellulase family glycosylhydrolase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D JG479_06360 FecR domain-containing protein K07165 fecR; transmembrane sensor
D JG479_19385 FecR domain-containing protein K07165 fecR; transmembrane sensor
D JG479_00290 CHASE domain-containing protein K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3]
D JG479_18405 response regulator K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3]
D JG479_11440 SpoIIE family protein phosphatase K20977 hsbR; two-component system, HptB-dependent secretion and biofilm response regulator
D JG479_11445 STAS domain-containing protein K20978 hsbA; HptB-dependent secretion and biofilm anti anti-sigma factor
D JG479_04405 flgM; (GenBank) flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04082 Neuroactive ligand signaling
C 04081 Hormone signaling
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome [PATH:pslc04146]
D JG479_17060 fadD; (GenBank) long-chain-fatty-acid--CoA ligase FadD K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D JG479_06770 icd; (GenBank) NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D JG479_08770 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D JG479_07580 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D JG479_03475 catalase K03781 katE; catalase [EC:1.11.1.6]
D JG479_18795 catalase K03781 katE; catalase [EC:1.11.1.6]
D JG479_03385 superoxide dismutase family protein K04565 SOD1; superoxide dismutase, Cu-Zn family [EC:1.15.1.1]
D JG479_09855 superoxide dismutase [Fe] K04564 SOD2; superoxide dismutase, Fe-Mn family [EC:1.15.1.1]
D JG479_18275 superoxide dismutase K04564 SOD2; superoxide dismutase, Fe-Mn family [EC:1.15.1.1]
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
D JG479_03005 petA; (GenBank) ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:pslc02024]
D JG479_11150 Hpt domain-containing protein K10911 luxU; two-component system, phosphorelay protein LuxU
D JG479_14900 hfq; (GenBank) RNA chaperone Hfq K03666 hfq; host factor-I protein
D JG479_06720 anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D JG479_01110 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D JG479_06715 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D JG479_02530 glycosyltransferase family 2 protein K12990 rfbF; rhamnosyltransferase [EC:2.4.1.-]
D JG479_16760 3-deoxy-7-phosphoheptulonate synthase class II K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D JG479_03730 HAMP domain-containing histidine kinase K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
D JG479_03740 sigma 54-interacting transcriptional regulator K07715 glrR; two-component system, NtrC family, response regulator GlrR
D JG479_08870 response regulator transcription factor K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D JG479_14845 extracellular solute-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D JG479_17060 fadD; (GenBank) long-chain-fatty-acid--CoA ligase FadD K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D JG479_09405 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D JG479_02810 transcriptional repressor K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D JG479_13535 GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D JG479_12850 ribD; (GenBank) bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D JG479_13165 TolC family protein K18139 oprM; outer membrane protein, multidrug efflux system
D JG479_13365 TolC family protein K18139 oprM; outer membrane protein, multidrug efflux system
D JG479_18100 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D JG479_16540 yidC; (GenBank) membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D JG479_14240 S8 family serine peptidase K14645 K14645; serine protease [EC:3.4.21.-]
D JG479_01215 secE; (GenBank) preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D JG479_04935 secG; (GenBank) preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D JG479_15180 secY; (GenBank) preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D JG479_14645 yajC; (GenBank) preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D JG479_01660 secA; (GenBank) preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D JG479_14480 ftsY; (GenBank) signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D JG479_14430 secB; (GenBank) protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D JG479_11490 ffh; (GenBank) signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:pslc02030]
D JG479_01720 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JG479_02580 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JG479_03260 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JG479_03675 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JG479_04805 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JG479_04945 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JG479_06220 PAS domain S-box protein K03406 mcp; methyl-accepting chemotaxis protein
D JG479_11935 PAS domain-containing methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JG479_12210 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D JG479_12285 cache domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D JG479_15390 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JG479_15720 PAS domain S-box protein K03406 mcp; methyl-accepting chemotaxis protein
D JG479_16970 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JG479_18335 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JG479_19105 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JG479_19595 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JG479_11515 PAS domain S-box protein K03776 aer; aerotaxis receptor
D JG479_04635 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D JG479_15730 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D JG479_04660 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D JG479_04665 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D JG479_15725 purine-binding chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D JG479_04625 cheY; (GenBank) chemotaxis response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D JG479_07830 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D JG479_07870 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D JG479_11625 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D JG479_15735 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D JG479_17925 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D JG479_19205 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D JG479_04630 protein phosphatase CheZ K03414 cheZ; chemotaxis protein CheZ
D JG479_02805 chemotaxis protein CheX K03409 cheX; chemotaxis protein CheX
D JG479_04640 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D JG479_15705 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D JG479_04415 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D JG479_15710 cheD; (GenBank) chemoreceptor glutamine deamidase CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D JG479_04420 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D JG479_15715 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D JG479_04540 fliG; (GenBank) flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D JG479_04570 fliM; (GenBank) flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D JG479_04575 fliN; (GenBank) flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D JG479_04645 flagellar motor protein K02556 motA; chemotaxis protein MotA
D JG479_12795 pomA; (GenBank) flagellar motor protein PomA K02556 motA; chemotaxis protein MotA
D JG479_04650 OmpA family protein K02557 motB; chemotaxis protein MotB
D JG479_12790 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D JG479_01665
D JG479_15955
C 02040 Flagellar assembly [PATH:pslc02040]
D JG479_04530 fliE; (GenBank) flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D JG479_04535 fliF; (GenBank) flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D JG479_04540 fliG; (GenBank) flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D JG479_04545 fliH; (GenBank) flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D JG479_04550 fliI; (GenBank) flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D JG479_04555 fliJ; (GenBank) flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ
D JG479_04560 flagellar hook-length control protein FliK K02414 fliK; flagellar hook-length control protein FliK
D JG479_04565 fliL; (GenBank) flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D JG479_12630 fliL; (GenBank) flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D JG479_04570 fliM; (GenBank) flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D JG479_04575 fliN; (GenBank) flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D JG479_04580 fliO; (GenBank) flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D JG479_04585 fliP; (GenBank) flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D JG479_04590 fliQ; (GenBank) flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D JG479_04595 fliR; (GenBank) flagellar type III secretion system protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D JG479_04605 flhA; (GenBank) flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D JG479_04600 flhB; (GenBank) flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D JG479_04410 flgA; (GenBank) flagellar basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D JG479_04425 flgB; (GenBank) flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D JG479_04430 flgC; (GenBank) flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D JG479_04435 flgD; (GenBank) flagellar hook assembly protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D JG479_04440 flgE; (GenBank) flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D JG479_04445 flagellar basal body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D JG479_04450 flgG; (GenBank) flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D JG479_04455 flgH; (GenBank) flagellar basal body L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D JG479_04460 flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D JG479_04465 flgJ; (GenBank) flagellar assembly peptidoglycan hydrolase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ
D JG479_04470 flgK; (GenBank) flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D JG479_04475 flgL; (GenBank) flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D JG479_03700 hypothetical protein K24344 flgO; flagellar H-ring protein FlgO
D JG479_04360 LPP20 family lipoprotein K09860 flgP; outer membrane protein FlgP
D JG479_14875 sel1 repeat family protein K21217 motX; sodium-type polar flagellar protein MotX
D JG479_11415 OmpA family protein K21218 motY; sodium-type flagellar protein MotY
D JG479_04480 flagellin K02406 fliC; flagellin
D JG479_04485 flagellin K02406 fliC; flagellin
D JG479_04495 fliD; (GenBank) flagellar filament capping protein FliD K02407 fliD; flagellar hook-associated protein 2
D JG479_04505 fliS; (GenBank) flagellar export chaperone FliS K02422 fliS; flagellar secretion chaperone FliS
D JG479_04645 flagellar motor protein K02556 motA; chemotaxis protein MotA
D JG479_12795 pomA; (GenBank) flagellar motor protein PomA K02556 motA; chemotaxis protein MotA
D JG479_04650 OmpA family protein K02557 motB; chemotaxis protein MotB
D JG479_12790 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D JG479_04405 flgM; (GenBank) flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D JG479_04400 flagellar protein FlgN K02399 flgN; flagellar biosynthesis protein FlgN
D JG479_14505 rpoD; (GenBank) RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D JG479_04510 sigma-54-dependent Fis family transcriptional regulator K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D JG479_02905 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D JG479_04525 sigma-54-dependent Fis family transcriptional regulator K10943 flrC; two-component system, response regulator FlrC
D JG479_04620 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D JG479_04260 eno; (GenBank) phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04981 Folate transport and metabolism [PATH:pslc04981]
D JG479_12515 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
D JG479_14260 folA; (GenBank) type 3 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D JG479_12860 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D JG479_04290 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D JG479_12015 metH; (GenBank) methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D JG479_12020 homocysteine S-methyltransferase family protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04980 Cobalamin transport and metabolism
D JG479_12015 metH; (GenBank) methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D JG479_12020 homocysteine S-methyltransferase family protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
C 04382 Cornified envelope formation
D JG479_01675 hutH; (GenBank) histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:pslc01501]
D JG479_12170 MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D JG479_16600 glycoside hydrolase family 3 C-terminal domain-containing protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D JG479_04895 beta-lactamase family protein K01467 ampC; beta-lactamase class C [EC:3.5.2.6]
D JG479_16075 M56 family metallopeptidase K02172 blaR1; bla regulator protein blaR1
D JG479_16070 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D JG479_04065 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D JG479_18110 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D JG479_04060 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D JG479_18105 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D JG479_13165 TolC family protein K18139 oprM; outer membrane protein, multidrug efflux system
D JG479_13365 TolC family protein K18139 oprM; outer membrane protein, multidrug efflux system
D JG479_18100 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D JG479_13870 tolC; (GenBank) outer membrane channel protein TolC K12340 tolC; outer membrane protein
D JG479_01775 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D JG479_10945 mrdA; (GenBank) penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D JG479_03120 peptidoglycan glycosyltransferase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D JG479_08960 MBL fold metallo-hydrolase K17837 bla2; metallo-beta-lactamase class B [EC:3.5.2.6]
C 01502 Vancomycin resistance [PATH:pslc01502]
D JG479_03160 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D JG479_13270 alr; (GenBank) alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D JG479_03130 murF; (GenBank) UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D JG479_03135 mraY; (GenBank) phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D JG479_03150 murG; (GenBank) undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:pslc01503]
D JG479_09260 GHKL domain-containing protein K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D JG479_09255 response regulator transcription factor K07660 phoP; two-component system, OmpR family, response regulator PhoP
D JG479_01520 phosphoethanolamine--lipid A transferase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D JG479_15545 phosphoethanolamine--lipid A transferase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D JG479_05130 ABC transporter substrate-binding protein K19226 sapA; cationic peptide transport system substrate-binding protein
D JG479_05125 ABC transporter permease K19227 sapB; cationic peptide transport system permease protein
D JG479_05120 ABC transporter permease subunit K19228 sapC; cationic peptide transport system permease protein
D JG479_05115 ATP-binding cassette domain-containing protein K19229 sapD; cationic peptide transport system ATP-binding protein
D JG479_05110 ATP-binding cassette domain-containing protein K19230 sapF; cationic peptide transport system ATP-binding protein
D JG479_14405 HAMP domain-containing protein K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D JG479_14400 response regulator K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D JG479_14915 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D JG479_01415 thiol:disulfide interchange protein DsbA/DsbL K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D JG479_01420 thiol:disulfide interchange protein DsbA/DsbL K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D JG479_12165 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D JG479_17990 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D JG479_04065 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D JG479_18110 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D JG479_04060 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D JG479_18105 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D JG479_13870 tolC; (GenBank) outer membrane channel protein TolC K12340 tolC; outer membrane protein
D JG479_05265 lpxA; (GenBank) acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:pslc01000]
C 01001 Protein kinases [BR:pslc01001]
D JG479_11860 serine protein kinase RIO K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1]
D JG479_06610 polysaccharide biosynthesis tyrosine autokinase K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D JG479_12960 phoR; (GenBank) phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D JG479_09260 GHKL domain-containing protein K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D JG479_15410 envZ; (GenBank) two-component system sensor histidine kinase EnvZ K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D JG479_14405 HAMP domain-containing protein K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D JG479_11870 HAMP domain-containing protein K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3]
D JG479_15490 heavy metal sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D JG479_08875 DUF4118 domain-containing protein K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D JG479_12240 response regulator K07647 torS; two-component system, OmpR family, sensor histidine kinase TorS [EC:2.7.13.3]
D JG479_13435 arcB; (GenBank) aerobic respiration two-component sensor histidine kinase ArcB K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D JG479_04840 ATP-binding protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D JG479_19825 sensor histidine kinase N-terminal domain-containing protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D JG479_04235 barA; (GenBank) two-component sensor histidine kinase BarA K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D JG479_03280 sensor histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D JG479_11585 histidine kinase K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3]
D JG479_07300 histidine kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D JG479_00785 glnL; (GenBank) nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D JG479_03730 HAMP domain-containing histidine kinase K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
D JG479_17915 two-component sensor histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D JG479_19725 HAMP domain-containing histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D JG479_04635 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D JG479_15730 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D JG479_04520 PAS domain-containing protein K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3]
D JG479_18190 HAMP domain-containing histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D JG479_00290 CHASE domain-containing protein K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3]
D JG479_18405 response regulator K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3]
D JG479_03640 response regulator K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
D JG479_10125 PAS domain S-box protein K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:pslc01009]
D JG479_09895 htpG; (GenBank) molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D JG479_03945 serB; (GenBank) phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:pslc01002]
D JG479_11600 lspA; (GenBank) signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D JG479_14375 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D JG479_07535 pcp; (GenBank) pyroglutamyl-peptidase I K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3]
D JG479_03875 guaA; (GenBank) glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D JG479_15015 peptidase domain-containing ABC transporter K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D JG479_05010 purF; (GenBank) amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D JG479_09815 gltB; (GenBank) glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D JG479_16410 glmS; (GenBank) glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D JG479_07530 asnB; (GenBank) asparagine synthase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D JG479_06690 type 1 glutamine amidotransferase K05520 yhbO; deglycase [EC:3.5.1.124]
D JG479_03785 class GN sortase K07284 srtA; sortase A [EC:3.4.22.70]
D JG479_12330 L,D-transpeptidase family protein K21470 ycbB; L,D-transpeptidase YcbB
D JG479_03820 CPBP family intramembrane metalloprotease K07052 K07052; CAAX protease family protein
D JG479_06675 CPBP family intramembrane metalloprotease K07052 K07052; CAAX protease family protein
D JG479_00585 M1 family metallopeptidase K01254 LTA4H; leukotriene-A4 hydrolase [EC:3.3.2.6]
D JG479_08485 pepN; (GenBank) aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D JG479_02180 prlC; (GenBank) oligopeptidase A K01414 prlC; oligopeptidase A [EC:3.4.24.70]
D JG479_11800 M3 family metallopeptidase K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5]
D JG479_17225 immune inhibitor A K09607 ina; immune inhibitor A [EC:3.4.24.-]
D JG479_01645 M13 family metallopeptidase K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D JG479_07100 M13 family metallopeptidase K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D JG479_17980 insulinase family protein K01407 ptrA; protease III [EC:3.4.24.55]
D JG479_11265 insulinase family protein K01408 IDE; insulysin [EC:3.4.24.56]
D JG479_03850 insulinase family protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D JG479_10480 insulinase family protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D JG479_03670 leucyl aminopeptidase family protein K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D JG479_13200 pepA; (GenBank) leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D JG479_18215 leucyl aminopeptidase family protein K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D JG479_12910 pepB; (GenBank) aminopeptidase PepB K07751 pepB; PepB aminopeptidase [EC:3.4.11.23]
D JG479_00630 dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D JG479_19170 M20/M25/M40 family metallo-hydrolase K01295 cpg; glutamate carboxypeptidase [EC:3.4.17.11]
D JG479_06910 dapE; (GenBank) succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D JG479_11915 dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D JG479_18860 allantoate amidohydrolase K02083 allC; allantoate deiminase [EC:3.5.3.9]
D JG479_09460 M23 family metallopeptidase K21472 lytH; peptidoglycan LD-endopeptidase LytH [EC:3.4.-.-]
D JG479_05200 map; (GenBank) type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D JG479_00065 pepQ; (GenBank) Xaa-Pro dipeptidase K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9]
D JG479_13340 pepP; (GenBank) Xaa-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D JG479_04915 ftsH; (GenBank) ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D JG479_08110 htpX; (GenBank) protease HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D JG479_10210 M48 family metallopeptidase K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-]
D JG479_05240 rseP; (GenBank) sigma E protease regulator RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D JG479_16075 M56 family metallopeptidase K02172 blaR1; bla regulator protein blaR1
D JG479_19900 hypothetical protein K23743 E3.4.24.33; peptidyl-Asp metalloendopeptidase [EC:3.4.24.33]
D JG479_10030 zinc-dependent peptidase K09933 mtfA; MtfA peptidase
D JG479_02980 Do family serine endopeptidase K04772 degQ; serine protease DegQ [EC:3.4.21.-]
D JG479_02975 trypsin-like peptidase domain-containing protein K04691 hhoB; serine protease DegS [EC:3.4.21.-]
D JG479_14240 S8 family serine peptidase K14645 K14645; serine protease [EC:3.4.21.-]
D JG479_09330 S9 family peptidase K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26]
D JG479_03680 DPP IV N-terminal domain-containing protein K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D JG479_00380 S9 family peptidase K01354 ptrB; oligopeptidase B [EC:3.4.21.83]
D JG479_16175 S9 family peptidase K01354 ptrB; oligopeptidase B [EC:3.4.21.83]
D JG479_10960 serine hydrolase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D JG479_13600 pbp4b; (GenBank) penicillin binding protein PBP4B K21469 pbp4b; serine-type D-Ala-D-Ala carboxypeptidase [EC:3.4.16.4]
D JG479_05080 clpP; (GenBank) ATP-dependent Clp endopeptidase proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D JG479_05090 lon; (GenBank) endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D JG479_17780 brxL; (GenBank) BREX system Lon protease-like protein BrxL K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D JG479_15795 lexA; (GenBank) repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D JG479_16865 S24 family peptidase K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D JG479_04210 lepB; (GenBank) signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D JG479_06810 lepB; (GenBank) signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D JG479_08495 prc; (GenBank) carboxy terminal-processing peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D JG479_14455 S41 family peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D JG479_16105 penicillin acylase family protein K01434 pac; penicillin G amidase [EC:3.5.1.11]
D JG479_07325 sppA; (GenBank) signal peptide peptidase SppA K04773 sppA; protease IV [EC:3.4.21.-]
D JG479_06990 sohB; (GenBank) protease SohB K04774 sohB; serine protease SohB [EC:3.4.21.-]
D JG479_12635 glpG; (GenBank) rhomboid family intramembrane serine protease GlpG K02441 glpG; rhomboid protease GlpG [EC:3.4.21.105]
D JG479_07955 rrtA; (GenBank) rhombosortase K28165 rrtA; rhombosortase
D JG479_19075 rhomboid family intramembrane serine protease K07059 rho2; rhomboid family protease [EC:3.4.21.105]
D JG479_01735 hslV; (GenBank) ATP-dependent protease subunit HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D JG479_10165 isoaspartyl peptidase/L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D JG479_07950 ggt; (GenBank) gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D JG479_11345 ggt; (GenBank) gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D JG479_18845 gamma-glutamyltransferase K22602 hpxW; oxamate amidohydrolase [EC:3.5.1.126]
D JG479_08655 U32 family peptidase K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D JG479_19420 yegQ; (GenBank) tRNA 5-hydroxyuridine modification protein YegQ K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D JG479_01635 pmbA; (GenBank) metalloprotease PmbA K03592 pmbA; PmbA protein
D JG479_02155 tldD; (GenBank) metalloprotease TldD K03568 tldD; TldD protein
D JG479_14885 hflC; (GenBank) protease modulator HflC K04087 hflC; modulator of FtsH protease HflC
D JG479_14890 hflK; (GenBank) FtsH protease activity modulator HflK K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases [BR:pslc01003]
D JG479_17415 glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D JG479_11695 bcsA; (GenBank) UDP-forming cellulose synthase catalytic subunit K00694 bcsA; cellulose synthase (UDP-forming) [EC:2.4.1.12]
D JG479_12215 mrcB; (GenBank) penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D JG479_01775 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D JG479_03145 ftsW; (GenBank) cell division protein FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D JG479_10950 rodA; (GenBank) rod shape-determining protein RodA K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D JG479_12315 pelF; (GenBank) GT4 family glycosyltransferase PelF K21011 pelF; polysaccharide biosynthesis protein PelF
D JG479_02345 wecA; (GenBank) UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D JG479_00440 mdoH; (GenBank) glucans biosynthesis glucosyltransferase MdoH K03669 mdoH; membrane glycosyltransferase [EC:2.4.1.-]
D JG479_17660 glycosyl transferase K13693 gpgS; glucosyl-3-phosphoglycerate synthase [EC:2.4.1.266]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:pslc01005]
D JG479_05265 lpxA; (GenBank) acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D JG479_05300 lpxB; (GenBank) lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D JG479_03180 lpxC; (GenBank) UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D JG479_05255 lpxD; (GenBank) UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D JG479_05030 UDP-2,3-diacylglucosamine diphosphatase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D JG479_08405 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D JG479_13875 lpxL; (GenBank) LpxL/LpxP family Kdo(2)-lipid IV(A) lauroyl/palmitoleoyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D JG479_12695 waaA; (GenBank) lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D JG479_10240 acyloxyacyl hydrolase K12976 pagL; lipid A 3-O-deacylase [EC:3.1.1.-]
D JG479_01520 phosphoethanolamine--lipid A transferase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D JG479_15545 phosphoethanolamine--lipid A transferase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D JG479_12665 3-deoxy-D-manno-octulosonic acid kinase K11211 kdkA; 3-deoxy-D-manno-octulosonic acid kinase [EC:2.7.1.166]
D JG479_10700 kdsA; (GenBank) 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D JG479_08395 kdsB; (GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D JG479_02925 kdsC; (GenBank) 3-deoxy-manno-octulosonate-8-phosphatase KdsC K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D JG479_02930 KpsF/GutQ family sugar-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D JG479_12660 glycosyltransferase family 9 protein K12982 opsX; heptosyltransferase I [EC:2.4.-.-]
D JG479_12690 SIS domain-containing protein K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D JG479_12655 gmhB; (GenBank) D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D JG479_12685 hldE; (GenBank) bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D JG479_02530 glycosyltransferase family 2 protein K12990 rfbF; rhamnosyltransferase [EC:2.4.1.-]
D JG479_02345 wecA; (GenBank) UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:pslc01011]
D JG479_02970 murA; (GenBank) UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D JG479_00590 murB; (GenBank) UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D JG479_03155 murC; (GenBank) UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D JG479_03140 murD; (GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D JG479_03125 murE; (GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D JG479_03160 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D JG479_13270 alr; (GenBank) alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D JG479_01435 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D JG479_03135 mraY; (GenBank) phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D JG479_03150 murG; (GenBank) undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D JG479_12570 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D JG479_01710 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D JG479_11615 murJ; (GenBank) murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D JG479_01775 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D JG479_12215 mrcB; (GenBank) penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D JG479_10945 mrdA; (GenBank) penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D JG479_03120 peptidoglycan glycosyltransferase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D JG479_10960 serine hydrolase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D JG479_13600 pbp4b; (GenBank) penicillin binding protein PBP4B K21469 pbp4b; serine-type D-Ala-D-Ala carboxypeptidase [EC:3.4.16.4]
D JG479_03145 ftsW; (GenBank) cell division protein FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D JG479_10950 rodA; (GenBank) rod shape-determining protein RodA K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D JG479_12330 L,D-transpeptidase family protein K21470 ycbB; L,D-transpeptidase YcbB
D JG479_09460 M23 family metallopeptidase K21472 lytH; peptidoglycan LD-endopeptidase LytH [EC:3.4.-.-]
D JG479_03785 class GN sortase K07284 srtA; sortase A [EC:3.4.22.70]
D JG479_00060 transglycosylase SLT domain-containing protein K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D JG479_17020 lytic murein transglycosylase K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D JG479_18530 DUF3393 domain-containing protein K08306 mltC; peptidoglycan lytic transglycosylase C [EC:4.2.2.29]
D JG479_14780 LysM peptidoglycan-binding domain-containing protein K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D JG479_12725 mltF; (GenBank) membrane-bound lytic murein transglycosylase MltF K18691 mltF; peptidoglycan lytic transglycosylase F [EC:4.2.2.29]
D JG479_06475 mltG; (GenBank) endolytic transglycosylase MltG K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D JG479_05270 septal ring lytic transglycosylase RlpA family protein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D JG479_10955 septal ring lytic transglycosylase RlpA family protein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D JG479_14915 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D JG479_14350 ampD; (GenBank) 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:pslc01004]
D JG479_06450 fabD; (GenBank) ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D JG479_18205 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D JG479_07180 beta-ketoacyl synthase K18473 fabY; acetoacetyl-[acyl-carrier protein] synthase [EC:2.3.1.180]
D JG479_11360 fabB; (GenBank) beta-ketoacyl-ACP synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D JG479_06465 fabF; (GenBank) beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D JG479_06455 fabG; (GenBank) 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D JG479_07640 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D JG479_07790 fabA; (GenBank) bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D JG479_05260 fabZ; (GenBank) 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D JG479_12140 trans-2-enoyl-CoA reductase family protein K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D JG479_06040 arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D JG479_14985 tesB; (GenBank) acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D JG479_00690 fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D JG479_09350 acyl-CoA desaturase K22769 desA3; NADPH-dependent stearoyl-CoA 9-desaturase [EC:1.14.19.-]
D JG479_12355 acs; (GenBank) acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D JG479_13130 propionyl-CoA synthetase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D JG479_17060 fadD; (GenBank) long-chain-fatty-acid--CoA ligase FadD K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D JG479_07250 AMP-binding protein K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D JG479_14980 plsB; (GenBank) glycerol-3-phosphate 1-O-acyltransferase PlsB K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D JG479_06445 plsX; (GenBank) phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D JG479_12585 plsY; (GenBank) glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D JG479_13830 1-acylglycerol-3-phosphate O-acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:pslc01008]
D JG479_16100 MBL fold metallo-hydrolase K05555 actIV; cyclase [EC:4.-.-.-]
C 01006 Prenyltransferases [BR:pslc01006]
D JG479_12805 ispA; (GenBank) (2E,6E)-farnesyl diphosphate synthase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D JG479_14280 ispB; (GenBank) octaprenyl diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D JG479_05225 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D JG479_14905 miaA; (GenBank) tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D JG479_12620 ubiA; (GenBank) 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D JG479_12070 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D JG479_15750 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:pslc01007]
D JG479_03805 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D JG479_08320 glnS; (GenBank) glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D JG479_12925 gluQRS; (GenBank) tRNA glutamyl-Q(34) synthetase GluQRS K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D JG479_13460 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D JG479_01845 trpS; (GenBank) tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D JG479_05040 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D JG479_03925 argS; (GenBank) arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D JG479_06830 metG; (GenBank) methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D JG479_11605 ileS; (GenBank) isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D JG479_13210 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D JG479_10915 leuS; (GenBank) leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D JG479_13640 lysS; (GenBank) lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D JG479_05710 aspS; (GenBank) aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D JG479_08185 asnS; (GenBank) asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D JG479_19450 hisS; (GenBank) histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D JG479_00025 glyQ; (GenBank) glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D JG479_00030 glyS; (GenBank) glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D JG479_08695 serS; (GenBank) serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D JG479_08220 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D JG479_07260 thrS; (GenBank) threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D JG479_13520 alaS; (GenBank) alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D JG479_05915 pheS; (GenBank) phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D JG479_05920 pheT; (GenBank) phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D JG479_11430 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D JG479_08665 valine--pyruvate transaminase K00835 avtA; valine--pyruvate aminotransferase [EC:2.6.1.66]
D JG479_06860 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D JG479_00550 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K14287 ybdL; methionine transaminase [EC:2.6.1.88]
D JG479_17115 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D JG479_12650 glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D JG479_08130 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D JG479_01120 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D JG479_17470 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D JG479_08140 bioA; (GenBank) adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D JG479_12205 hemL; (GenBank) glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D JG479_09345 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D JG479_07440 serC; (GenBank) 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D JG479_18855 alanine--glyoxylate aminotransferase family protein K00839 pucG; (S)-ureidoglycine---glyoxylate transaminase [EC:2.6.1.112]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:pslc00194]
D JG479_16465 atpC; (GenBank) F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D JG479_16470 atpD; (GenBank) F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D JG479_16475 atpG; (GenBank) F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D JG479_16480 atpA; (GenBank) F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D JG479_16485 atpH; (GenBank) F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D JG479_16490 atpF; (GenBank) F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D JG479_16495 atpE; (GenBank) F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D JG479_16500 atpB; (GenBank) F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D JG479_16505 ATP synthase subunit I K02116 atpI; ATP synthase protein I
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:pslc03000]
D JG479_19650 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D JG479_19740 helix-turn-helix domain-containing protein K04033 eutR; AraC family transcriptional regulator, ethanolamine operon transcriptional activator
D JG479_03565 helix-turn-helix transcriptional regulator K25495 nimR; AraC family transcriptional regulator, regulator of nimT
D JG479_18270 DNA-3-methyladenine glycosylase 2 family protein K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D JG479_07565 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D JG479_09510 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D JG479_10695 transcriptional regulator GcvA K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D JG479_04815 ilvY; (GenBank) HTH-type transcriptional activator IlvY K02521 ilvY; LysR family transcriptional regulator, positive regulator for ilvC
D JG479_10005 LysR family transcriptional regulator K03576 metR; LysR family transcriptional regulator, regulator for metE and metH
D JG479_04350 LysR family transcriptional regulator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D JG479_14670 hydrogen peroxide-inducible genes activator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D JG479_19175 LysR family transcriptional regulator ArgP K05596 argP; LysR family transcriptional regulator, arginine and lysine transport system/DNA replication regulator
D JG479_10065 cysB; (GenBank) HTH-type transcriptional regulator CysB K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator
D JG479_11820 LysR family transcriptional regulator K21698 aaeR; LysR family transcriptional regulator, transcriptional activator for aaeXAB operon
D JG479_19495 LysR family transcriptional regulator K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon
D JG479_13755 LysR family transcriptional regulator K23773 hdfR; LysR family transcriptional regulator, flagellar master operon regulator
D JG479_07065 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D JG479_08895 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D JG479_08985 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D JG479_09310 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D JG479_09445 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D JG479_18580 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D JG479_19195 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D JG479_17165 gntR; (GenBank) gluconate operon transcriptional repressor GntR K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
D JG479_01685 hutC; (GenBank) histidine utilization repressor K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor
D JG479_16340 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D JG479_04765 fadR; (GenBank) fatty acid metabolism transcriptional regulator FadR K03603 fadR; GntR family transcriptional regulator, negative regulator for fad regulon and positive regulator of fabA
D JG479_14340 pdhR; (GenBank) pyruvate dehydrogenase complex transcriptional repressor PdhR K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D JG479_12055 PLP-dependent aminotransferase family protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D JG479_17505 betI; (GenBank) transcriptional regulator BetI K02167 betI; TetR/AcrR family transcriptional regulator, transcriptional repressor of bet genes
D JG479_14165 slmA; (GenBank) nucleoid occlusion factor SlmA K05501 slmA; TetR/AcrR family transcriptional regulator
D JG479_18830 TetR family transcriptional regulator C-terminal domain-containing protein K09017 rutR; TetR/AcrR family transcriptional regulator
D JG479_07780 TetR/AcrR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D JG479_18765 TetR/AcrR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D JG479_19100 TetR/AcrR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D JG479_00695 fabR; (GenBank) HTH-type transcriptional repressor FabR K22105 fabR; TetR/AcrR family transcriptional regulator, fatty acid biosynthesis regulator
D JG479_00945 asnC; (GenBank) transcriptional regulator AsnC K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
D JG479_00295 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D JG479_04110 winged helix-turn-helix transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D JG479_08720 lrp; (GenBank) leucine-responsive transcriptional regulator Lrp K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D JG479_07290 Lrp/AsnC family transcriptional regulator K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
D JG479_00570 response regulator transcription factor K20918 vpsT; LuxR family transcriptional regulator, positive regulator of biofilm formation
D JG479_04960 helix-turn-helix transcriptional regulator K20918 vpsT; LuxR family transcriptional regulator, positive regulator of biofilm formation
D JG479_19035 helix-turn-helix transcriptional regulator K20918 vpsT; LuxR family transcriptional regulator, positive regulator of biofilm formation
D JG479_19875 MarR family transcriptional regulator K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D JG479_19130 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D JG479_11035 MerR family transcriptional regulator K13638 zntR; MerR family transcriptional regulator, Zn(II)-responsive regulator of zntA
D JG479_19065 soxR; (GenBank) redox-sensitive transcriptional activator SoxR K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR
D JG479_08315 fur; (GenBank) ferric iron uptake transcriptional regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D JG479_02810 transcriptional repressor K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D JG479_09405 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D JG479_06245 FNR family transcription factor K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D JG479_02200 iscR; (GenBank) Fe-S cluster assembly transcriptional regulator IscR K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D JG479_19120 metalloregulator ArsR/SmtB family transcription factor K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D JG479_15305 helix-turn-helix transcriptional regulator K22042 hlyU; ArsR family transcriptional regulator, virulence genes transcriptional regulator
D JG479_16070 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D JG479_00595 birA; (GenBank) bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D JG479_14520 fis; (GenBank) DNA-binding transcriptional regulator Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D JG479_04510 sigma-54-dependent Fis family transcriptional regulator K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D JG479_15850 norR; (GenBank) nitric oxide reductase transcriptional regulator NorR K12266 norR; anaerobic nitric oxide reductase transcription regulator
D JG479_05975 sigma 54-interacting transcriptional regulator K15836 fhlA; formate hydrogenlyase transcriptional activator
D JG479_13580 transcriptional regulator K07726 K07726; putative transcriptional regulator
D JG479_15245 helix-turn-helix transcriptional regulator K07729 K07729; putative transcriptional regulator
D JG479_01760 metJ; (GenBank) met regulon transcriptional regulator MetJ K03764 metJ; MetJ family transcriptional regulator, methionine regulon repressor
D JG479_04105 putA; (GenBank) bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D JG479_12145 BolA/IbaG family iron-sulfur metabolism protein K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D JG479_16510 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D JG479_16740 transcriptional regulator K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D JG479_14290 argR; (GenBank) transcriptional regulator ArgR K03402 argR; transcriptional regulator of arginine metabolism
D JG479_09775 HrcA family transcriptional regulator K03705 hrcA; heat-inducible transcriptional repressor
D JG479_11670 tyrR; (GenBank) transcriptional regulator TyrR K03721 tyrR; transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport
D JG479_10260 glycine cleavage system transcriptional repressor K03567 gcvR; glycine cleavage system transcriptional repressor
D JG479_05135 pspF; (GenBank) phage shock protein operon transcriptional activator K03974 pspF; psp operon transcriptional activator
D JG479_05150 pspC; (GenBank) envelope stress response membrane protein PspC K03973 pspC; phage shock protein C
D JG479_12065 FMN-binding negative transcriptional regulator K07734 paiB; transcriptional regulator
D JG479_13910 YqgE/AlgH family protein K07735 algH; putative transcriptional regulator
D JG479_09950 conjugal transfer protein TraR K06204 dksA; RNA polymerase-binding transcription factor
D JG479_12920 dksA; (GenBank) RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D JG479_12855 nrdR; (GenBank) transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR
D JG479_03105 mraZ; (GenBank) division/cell wall cluster transcriptional repressor MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:pslc03021]
D JG479_15155 rpoA; (GenBank) DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D JG479_01245 rpoB; (GenBank) DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D JG479_01250 rpoC; (GenBank) DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D JG479_00970 rpoZ; (GenBank) DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D JG479_14505 rpoD; (GenBank) RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D JG479_12385 rpoS; (GenBank) RNA polymerase sigma factor RpoS K03087 rpoS; RNA polymerase nonessential primary-like sigma factor
D JG479_04185 rpoE; (GenBank) RNA polymerase sigma factor RpoE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D JG479_17300 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D JG479_18065 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D JG479_14465 rpoH; (GenBank) RNA polymerase sigma factor RpoH K03089 rpoH; RNA polymerase sigma-32 factor
D JG479_02905 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D JG479_04620 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
D JG479_14045 rapA; (GenBank) RNA polymerase-associated protein RapA K03580 hepA; ATP-dependent helicase HepA [EC:5.6.2.-]
D JG479_11110 nusA; (GenBank) transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D JG479_12830 nusB; (GenBank) transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D JG479_01220 nusG; (GenBank) transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D JG479_03020 sspA; (GenBank) stringent starvation protein A K03599 sspA; stringent starvation protein A
D JG479_03025 ClpXP protease specificity-enhancing factor K03600 sspB; stringent starvation protein B
D JG479_04190 metal ABC transporter ATP-binding protein K03597 rseA; sigma-E factor negative regulatory protein RseA
D JG479_04195 MucB/RseB C-terminal domain-containing protein K03598 rseB; sigma-E factor negative regulatory protein RseB
D JG479_04200 SoxR reducing system RseC family protein K03803 rseC; sigma-E factor negative regulatory protein RseC
D JG479_09950 conjugal transfer protein TraR K06204 dksA; RNA polymerase-binding transcription factor
D JG479_12920 dksA; (GenBank) RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D JG479_09725 greA; (GenBank) transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D JG479_15620 greB; (GenBank) transcription elongation factor GreB K04760 greB; transcription elongation factor GreB
D JG479_15910 rho; (GenBank) transcription termination factor Rho K03628 rho; transcription termination factor Rho
D JG479_18915 Rho-binding antiterminator K19000 rof; Rho-binding antiterminator
C 03019 Messenger RNA biogenesis [BR:pslc03019]
D JG479_06410 rne; (GenBank) ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D JG479_02140 rng; (GenBank) ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D JG479_04215 rnc; (GenBank) ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D JG479_03295 rnr; (GenBank) ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D JG479_02780 orn; (GenBank) oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D JG479_15900 rhlB; (GenBank) ATP-dependent RNA helicase RhlB K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
D JG479_03830 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D JG479_16400 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D JG479_17555 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D JG479_11185 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D JG479_13780 recQ; (GenBank) DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D JG479_19605 RecQ family ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D JG479_04260 eno; (GenBank) phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D JG479_11085 pnp; (GenBank) polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D JG479_15910 rho; (GenBank) transcription termination factor Rho K03628 rho; transcription termination factor Rho
D JG479_17945 dnaK; (GenBank) molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D JG479_00995 groL; (GenBank) chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D JG479_14900 hfq; (GenBank) RNA chaperone Hfq K03666 hfq; host factor-I protein
D JG479_12930 pcnB; (GenBank) polynucleotide adenylyltransferase PcnB K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D JG479_04270 rppH; (GenBank) RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D JG479_13510 csrA; (GenBank) carbon storage regulator CsrA K03563 csrA; carbon storage regulator
D JG479_01705 rraA; (GenBank) ribonuclease E activity regulator RraA K02553 rraA; regulator of ribonuclease activity A
D JG479_18835 putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase K02553 rraA; regulator of ribonuclease activity A
D JG479_13825 rraB; (GenBank) ribonuclease E inhibitor RraB K09893 rraB; regulator of ribonuclease activity B
D JG479_02890 rapZ; (GenBank) RNase adapter RapZ K06958 rapZ; RNase adapter protein RapZ
D JG479_10160 hrpA; (GenBank) ATP-dependent RNA helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
D JG479_11985 hrpB; (GenBank) ATP-dependent helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:pslc03011]
D JG479_07455 rpsA; (GenBank) 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D JG479_05205 rpsB; (GenBank) 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D JG479_14940 rpsC; (GenBank) 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D JG479_15160 rpsD; (GenBank) 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D JG479_15195 rpsE; (GenBank) 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D JG479_13310 rpsF; (GenBank) 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D JG479_01260 rpsG; (GenBank) 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D JG479_15210 rpsH; (GenBank) 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D JG479_03000 rpsI; (GenBank) 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D JG479_14975 rpsJ; (GenBank) 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D JG479_15165 rpsK; (GenBank) 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D JG479_01255 rpsL; (GenBank) 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D JG479_15170 rpsM; (GenBank) 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D JG479_15215 rpsN; (GenBank) 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D JG479_11090 rpsO; (GenBank) 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D JG479_11485 rpsP; (GenBank) 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D JG479_14925 rpsQ; (GenBank) 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D JG479_13300 rpsR; (GenBank) 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D JG479_14950 rpsS; (GenBank) 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D JG479_11620 rpsT; (GenBank) 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D JG479_14490 rpsU; (GenBank) 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D JG479_01230 rplA; (GenBank) 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D JG479_14955 rplB; (GenBank) 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D JG479_14970 rplC; (GenBank) 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D JG479_14965 rplD; (GenBank) 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D JG479_15220 rplE; (GenBank) 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D JG479_15205 rplF; (GenBank) 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D JG479_13295 rplI; (GenBank) 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D JG479_01235 rplJ; (GenBank) 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D JG479_01225 rplK; (GenBank) 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D JG479_01240 rplL; (GenBank) 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D JG479_02995 rplM; (GenBank) 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D JG479_15230 rplN; (GenBank) 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D JG479_15185 rplO; (GenBank) 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D JG479_14935 rplP; (GenBank) 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D JG479_15150 rplQ; (GenBank) 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D JG479_15200 rplR; (GenBank) 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D JG479_11470 rplS; (GenBank) 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D JG479_07275 rplT; (GenBank) 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D JG479_14275 rplU; (GenBank) 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D JG479_14945 rplV; (GenBank) 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D JG479_14960 rplW; (GenBank) 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D JG479_15225 rplX; (GenBank) 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D JG479_14270 rpmA; (GenBank) 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D JG479_14150 rpmB; (GenBank) 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D JG479_14930 rpmC; (GenBank) 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D JG479_15190 rpmD; (GenBank) 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D JG479_01750 rpmE; (GenBank) 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D JG479_17630 type B 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D JG479_06440 rpmF; (GenBank) 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D JG479_14145 rpmG; (GenBank) 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D JG479_16555 rpmH; (GenBank) 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D JG479_07270 rpmI; (GenBank) 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D JG479_15175 rpmJ; (GenBank) 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D JG479_17635 ykgO; (GenBank) type B 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D JG479_10755 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25
D JG479_00170 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D JG479_01295 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D JG479_01445 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D JG479_05890 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D JG479_12765 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D JG479_15145 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D JG479_15890 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D JG479_16440 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D JG479_19260 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D JG479_00185 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D JG479_01300 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D JG479_01460 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D JG479_05895 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D JG479_12760 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D JG479_15140 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D JG479_15885 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D JG479_16435 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D JG479_19255 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D JG479_00190 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D JG479_01305 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D JG479_01465 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D JG479_05900 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D JG479_12750 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D JG479_12755 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D JG479_15135 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D JG479_15880 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D JG479_16430 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D JG479_19250 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 03009 Ribosome biogenesis [BR:pslc03009]
D JG479_04215 rnc; (GenBank) ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D JG479_11860 serine protein kinase RIO K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1]
D JG479_02780 orn; (GenBank) oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D JG479_04220 era; (GenBank) GTPase Era K03595 era; GTPase
D JG479_14265 cgtA; (GenBank) Obg family GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-]
D JG479_09950 conjugal transfer protein TraR K06204 dksA; RNA polymerase-binding transcription factor
D JG479_12920 dksA; (GenBank) RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D JG479_11110 nusA; (GenBank) transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D JG479_12830 nusB; (GenBank) transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D JG479_01220 nusG; (GenBank) transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D JG479_02640 rsuA; (GenBank) 16S rRNA pseudouridine(516) synthase RsuA K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D JG479_16065 rRNA pseudouridine synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D JG479_02595 rsmA; (GenBank) 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D JG479_00105 rsmB; (GenBank) 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D JG479_13420 rsmC; (GenBank) 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D JG479_14485 rsmD; (GenBank) 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D JG479_13900 rsmE; (GenBank) 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D JG479_06630 rsmF; (GenBank) 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF K11392 rsmF; 16S rRNA (cytosine1407-C5)-methyltransferase [EC:2.1.1.178]
D JG479_16520 rsmG; (GenBank) 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D JG479_03110 rsmH; (GenBank) 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D JG479_03050 rsmI; (GenBank) 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D JG479_02190 class I SAM-dependent methyltransferase K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242]
D JG479_06945 methyltransferase domain-containing protein K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187]
D JG479_03300 rlmB; (GenBank) 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D JG479_04910 rlmE; (GenBank) 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D JG479_18245 rlmF; (GenBank) 23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF K06970 rlmF; 23S rRNA (adenine1618-N6)-methyltransferase [EC:2.1.1.181]
D JG479_12155 methyltransferase K11391 rlmG; 23S rRNA (guanine1835-N2)-methyltransferase [EC:2.1.1.174]
D JG479_10940 rlmH; (GenBank) 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D JG479_10145 class I SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D JG479_10315 class I SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D JG479_14760 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266]
D JG479_08440 rlmKL; (GenBank) bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL K12297 rlmKL; 23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.264 2.1.1.173]
D JG479_10680 rlmM; (GenBank) 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM K06968 rlmM; 23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:2.1.1.186]
D JG479_19430 trmG_rlmN; (GenBank) bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D JG479_04240 rlmD; (GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D JG479_02635 rluA; (GenBank) bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D JG479_08390 TIGR01621 family pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D JG479_09900 RluA family pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D JG479_18605 RluA family pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D JG479_06975 rluB; (GenBank) 23S rRNA pseudouridine(2605) synthase RluB K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D JG479_06415 rluC; (GenBank) 23S rRNA pseudouridine(955/2504/2580) synthase RluC K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D JG479_11530 rluD; (GenBank) 23S rRNA pseudouridine(1911/1915/1917) synthase RluD K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D JG479_08570 pseudouridine synthase K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
D JG479_17400 rluF; (GenBank) 23S rRNA pseudouridine(2604) synthase RluF K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
D JG479_03890 rimI; (GenBank) ribosomal protein S18-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D JG479_13805 rimK; (GenBank) 30S ribosomal protein S6--L-glutamate ligase K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
D JG479_11480 rimM; (GenBank) ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM
D JG479_16110 30S ribosomal protein S12 methylthiotransferase accessory protein YcaO K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor
D JG479_14510 prmA; (GenBank) 50S ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D JG479_11235 prmB; (GenBank) 50S ribosomal protein L3 N(5)-glutamine methyltransferase K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298]
D JG479_08595 cupin domain-containing protein K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47]
D JG479_06410 rne; (GenBank) ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D JG479_02140 rng; (GenBank) ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D JG479_13915 ruvX; (GenBank) Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D JG479_15925 dbpA; (GenBank) ATP-dependent RNA helicase DbpA K05591 dbpA; ATP-dependent RNA helicase DbpA [EC:5.6.2.6]
D JG479_11185 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D JG479_13690 srmB; (GenBank) ATP-dependent RNA helicase SrmB K05590 srmB; ATP-dependent RNA helicase SrmB [EC:5.6.2.7]
D JG479_02775 rsgA; (GenBank) small ribosomal subunit biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D JG479_19465 der; (GenBank) ribosome biogenesis GTPase Der K03977 engA; GTPase
D JG479_00420 ylqF; (GenBank) ribosome biogenesis GTPase YlqF K14540 rbgA; ribosome biogenesis GTPase A
D JG479_07245 hflX; (GenBank) GTPase HflX K03665 hflX; GTPase
D JG479_14895 hflX; (GenBank) GTPase HflX K03665 hflX; GTPase
D JG479_00140 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D JG479_00965 spoT; (GenBank) bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D JG479_11100 rbfA; (GenBank) 30S ribosome-binding factor RbfA K02834 rbfA; ribosome-binding factor A
D JG479_11115 rimP; (GenBank) ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP
D JG479_00765 RNA-binding S4 domain-containing protein K14761 rlbA; ribosome-associated protein
D JG479_10935 rsfS; (GenBank) ribosome silencing factor K09710 ybeB; ribosome-associated protein
D JG479_10840 ybeY; (GenBank) rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor
D JG479_04905 yhbY; (GenBank) ribosome assembly RNA-binding protein YhbY K07574 yhbY; RNA-binding protein
D JG479_01630 DUF615 domain-containing protein K09889 yjgA; ribosome-associated protein
D JG479_07785 rmf; (GenBank) ribosome modulation factor K03812 rmf; ribosome modulation factor
D JG479_02900 hpf; (GenBank) ribosome hibernation promoting factor K05808 hpf; ribosome hibernation promoting factor
D JG479_12490 raiA; (GenBank) ribosome-associated translation inhibitor RaiA K05809 raiA; ribosome-associated inhibitor A
D JG479_10765 ychF; (GenBank) redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase
D JG479_06435 yceD; (GenBank) 23S rRNA accumulation protein YceD K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:pslc03016]
D JG479_03755 multifunctional CCA addition/repair protein K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D JG479_03805 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D JG479_08220 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D JG479_11605 ileS; (GenBank) isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D JG479_10915 leuS; (GenBank) leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D JG479_06830 metG; (GenBank) methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D JG479_08320 glnS; (GenBank) glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D JG479_03925 argS; (GenBank) arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D JG479_13640 lysS; (GenBank) lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D JG479_05710 aspS; (GenBank) aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D JG479_13520 alaS; (GenBank) alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D JG479_08185 asnS; (GenBank) asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D JG479_07260 thrS; (GenBank) threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D JG479_08695 serS; (GenBank) serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D JG479_05040 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D JG479_13210 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D JG479_19450 hisS; (GenBank) histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D JG479_05915 pheS; (GenBank) phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D JG479_05920 pheT; (GenBank) phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D JG479_13460 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D JG479_01845 trpS; (GenBank) tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D JG479_00825 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D JG479_00575 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D JG479_13415 trmB; (GenBank) tRNA (guanosine(46)-N7)-methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D JG479_08215 tsaA; (GenBank) tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-]
D JG479_04985 truA; (GenBank) tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D JG479_11095 truB; (GenBank) tRNA pseudouridine(55) synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D JG479_12410 tRNA pseudouridine(13) synthase TruD K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
D JG479_02205 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D JG479_10190 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D JG479_00140 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D JG479_14905 miaA; (GenBank) tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D JG479_16535 mnmE; (GenBank) tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D JG479_16525 mnmG; (GenBank) tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D JG479_01170 cysQ; (GenBank) 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D JG479_15090 cysQ; (GenBank) 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D JG479_16550 rnpA; (GenBank) ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D JG479_03055 rnpB; (GenBank) RNase P RNA component class A K01978 rnpB; RNase P catalytic RNA component
D JG479_11410 rnt; (GenBank) ribonuclease T K03683 rnt; ribonuclease T [EC:3.1.13.-]
D JG479_01280 rph; (GenBank) ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D JG479_17055 rnd; (GenBank) ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5]
D JG479_12030 ettA; (GenBank) energy-dependent translational throttle protein EttA K06020 ettA; energy-dependent translational throttle protein EttA
D JG479_00025 glyQ; (GenBank) glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D JG479_00030 glyS; (GenBank) glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D JG479_12925 gluQRS; (GenBank) tRNA glutamyl-Q(34) synthetase GluQRS K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D JG479_17935 ybaK; (GenBank) Cys-tRNA(Pro) deacylase K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D JG479_14830 prolyl-tRNA synthetase associated domain-containing protein K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-]
D JG479_12735 tadA; (GenBank) tRNA adenosine(34) deaminase TadA K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D JG479_02820 dusA; (GenBank) tRNA dihydrouridine(20/20a) synthase DusA K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
D JG479_14515 dusB; (GenBank) tRNA dihydrouridine synthase DusB K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D JG479_09945 tRNA-dihydrouridine synthase K05541 dusC; tRNA-dihydrouridine synthase C [EC:1.-.-.-]
D JG479_10830 miaB; (GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D JG479_19990 class I SAM-dependent methyltransferase K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-]
D JG479_01425 trmA; (GenBank) tRNA (uridine(54)-C5)-methyltransferase TrmA K00557 trmA; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35]
D JG479_11475 trmD; (GenBank) tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D JG479_00940 trmH; (GenBank) tRNA (guanosine(18)-2'-O)-methyltransferase TrmH K00556 trmH; tRNA (guanosine-2'-O-)-methyltransferase [EC:2.1.1.34]
D JG479_02195 trmJ; (GenBank) tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200]
D JG479_10310 tRNA (adenine(22)-N(1))-methyltransferase TrmK K06967 trmK; tRNA (adenine22-N1)-methyltransferase [EC:2.1.1.217]
D JG479_14420 trmL; (GenBank) tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D JG479_13685 methyltransferase K15460 yfiC; tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223]
D JG479_10595 RNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family
D JG479_05565 truC; (GenBank) tRNA pseudouridine(65) synthase TruC K06175 truC; tRNA pseudouridine65 synthase [EC:5.4.99.26]
D JG479_02635 rluA; (GenBank) bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D JG479_08390 TIGR01621 family pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D JG479_09900 RluA family pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D JG479_18605 RluA family pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D JG479_08580 mnmA; (GenBank) tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D JG479_06235 ttcA; (GenBank) tRNA 2-thiocytidine(32) synthetase TtcA K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D JG479_00045 tusA; (GenBank) sulfurtransferase TusA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D JG479_08560 tRNA 2-thiouridine-synthesizing protein K07237 tusB; tRNA 2-thiouridine synthesizing protein B
D JG479_08555 tusC; (GenBank) sulfurtransferase complex subunit TusC K07236 tusC; tRNA 2-thiouridine synthesizing protein C
D JG479_08550 tusD; (GenBank) sulfurtransferase complex subunit TusD K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
D JG479_08565 TusE/DsrC/DsvC family sulfur relay protein K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
D JG479_02215 iscA; (GenBank) iron-sulfur cluster assembly protein IscA K13628 iscA; iron-sulfur cluster assembly protein
D JG479_04170 folate-binding protein YgfZ K06980 ygfZ; tRNA-modifying protein YgfZ
D JG479_05020 tRNA-(ms[2]io[6]A)-hydroxylase K06169 miaE; tRNA 2-(methylsulfanyl)-N6-isopentenyladenosine37 hydroxylase [EC:1.14.99.69]
D JG479_07920 tRNA-(ms[2]io[6]A)-hydroxylase K06169 miaE; tRNA 2-(methylsulfanyl)-N6-isopentenyladenosine37 hydroxylase [EC:1.14.99.69]
D JG479_11365 mnmC; (GenBank) bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-]
D JG479_14655 queA; (GenBank) tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D JG479_10290 queC; (GenBank) 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D JG479_10285 queE; (GenBank) 7-carboxy-7-deazaguanine synthase QueE K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D JG479_05520 queF; (GenBank) NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D JG479_03255 queG; (GenBank) tRNA epoxyqueuosine(34) reductase QueG K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D JG479_14650 tgt; (GenBank) tRNA guanosine(34) transglycosylase Tgt K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D JG479_04025 thiI; (GenBank) tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D JG479_05320 tilS; (GenBank) tRNA lysidine(34) synthetase TilS K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D JG479_15125 tRNA(Met) cytidine acetyltransferase K06957 tmcA; tRNA(Met) cytidine acetyltransferase [EC:2.3.1.193]
D JG479_17080 tsaB; (GenBank) tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D JG479_12590 tsaD; (GenBank) tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D JG479_14920 tsaE; (GenBank) tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D JG479_08385 tcdA; (GenBank) tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D JG479_03295 rnr; (GenBank) ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D JG479_11085 pnp; (GenBank) polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:pslc03012]
D JG479_11450 translation initiation factor K03113 EIF1; translation initiation factor 1
D JG479_11105 infB; (GenBank) translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D JG479_07265 infC; (GenBank) translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D JG479_00650 ATP-binding cassette domain-containing protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D JG479_05210 tsf; (GenBank) elongation factor Ts K02357 tsf; elongation factor Ts
D JG479_00625 tuf; (GenBank) elongation factor Tu K02358 tuf; elongation factor Tu
D JG479_01270 tuf; (GenBank) elongation factor Tu K02358 tuf; elongation factor Tu
D JG479_00435 elongation factor G K02355 fusA; elongation factor G
D JG479_01265 fusA; (GenBank) elongation factor G K02355 fusA; elongation factor G
D JG479_10730 prfA; (GenBank) peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D JG479_05220 frr; (GenBank) ribosome recycling factor K02838 frr; ribosome recycling factor
D JG479_10725 prmC; (GenBank) peptide chain release factor N(5)-glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D JG479_10760 pth; (GenBank) aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D JG479_08750 infA; (GenBank) translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D JG479_02715 efp; (GenBank) elongation factor P K02356 efp; elongation factor P
D JG479_11275 yeiP; (GenBank) elongation factor P-like protein YeiP K02356 efp; elongation factor P
D JG479_02720 epmA; (GenBank) elongation factor P--(R)-beta-lysine ligase K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-]
D JG479_02710 epmB; (GenBank) EF-P beta-lysylation protein EpmB K19810 epmB; L-lysine 2,3-aminomutase [EC:5.4.3.-]
D JG479_11210 elongation factor P hydroxylase K09906 epmC; elongation factor P hydroxylase [EC:1.14.-.-]
D JG479_13645 prfB; (GenBank) peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D JG479_03920 prfC; (GenBank) peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
D JG479_19735 ribosome alternative rescue factor ArfA K09890 arfA; alternative ribosome-rescue factor
D JG479_19760 arfB; (GenBank) aminoacyl-tRNA hydrolase K15034 yaeJ; ribosome-associated protein
C 03110 Chaperones and folding catalysts [BR:pslc03110]
D JG479_08755 clpA; (GenBank) ATP-dependent Clp protease ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D JG479_11520 clpB; (GenBank) ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D JG479_05085 clpX; (GenBank) ATP-dependent protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D JG479_01730 hslU; (GenBank) HslU--HslV peptidase ATPase subunit K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D JG479_09895 htpG; (GenBank) molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D JG479_17945 dnaK; (GenBank) molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D JG479_02225 hscA; (GenBank) Fe-S protein assembly chaperone HscA K04044 hscA; molecular chaperone HscA
D JG479_11765 yegD; (GenBank) molecular chaperone K04046 yegD; hypothetical chaperone protein
D JG479_00995 groL; (GenBank) chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D JG479_17940 dnaJ; (GenBank) molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D JG479_15820 DnaJ domain-containing protein K05516 cbpA; curved DNA-binding protein
D JG479_02625 djlA; (GenBank) co-chaperone DjlA K05801 djlA; DnaJ like chaperone protein
D JG479_02220 hscB; (GenBank) co-chaperone HscB K04082 hscB; molecular chaperone HscB
D JG479_01320 hslO; (GenBank) Hsp33 family molecular chaperone HslO K04083 hslO; molecular chaperone Hsp33
D JG479_09770 grpE; (GenBank) nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D JG479_11135 Hsp20 family protein K04080 ibpA; molecular chaperone IbpA
D JG479_01325 hslR; (GenBank) ribosome-associated heat shock protein Hsp15 K04762 hslR; ribosome-associated heat shock protein Hsp15
D JG479_01000 co-chaperone GroES K04078 groES; chaperonin GroES
D JG479_04915 ftsH; (GenBank) ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D JG479_16500 atpB; (GenBank) F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D JG479_14430 secB; (GenBank) protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D JG479_14395 Spy/CpxP family protein refolding chaperone K06006 cpxP; periplasmic protein CpxP/Spy
D JG479_02840 copper chaperone PCu(A)C K09796 pccA; periplasmic copper chaperone A
D JG479_14240 S8 family serine peptidase K14645 K14645; serine protease [EC:3.4.21.-]
D JG479_12165 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D JG479_17990 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D JG479_05035 peptidylprolyl isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D JG479_05100 SurA N-terminal domain-containing protein K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D JG479_00670 fkpA; (GenBank) FKBP-type peptidyl-prolyl cis-trans isomerase K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8]
D JG479_07360 FKBP-type peptidyl-prolyl cis-trans isomerase K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8]
D JG479_11595 fkpB; (GenBank) FKBP-type peptidyl-prolyl cis-trans isomerase K03774 slpA; FKBP-type peptidyl-prolyl cis-trans isomerase SlpA [EC:5.2.1.8]
D JG479_04165 peptidylprolyl isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D JG479_14785 peptidylprolyl isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D JG479_03230 peptidylprolyl isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D JG479_18175 peptidylprolyl isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D JG479_02605 surA; (GenBank) peptidylprolyl isomerase SurA K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D JG479_15905 trxA; (GenBank) thioredoxin TrxA K03671 TXN; thioredoxin
D JG479_12770 tetratricopeptide repeat protein K05838 ybbN; putative thioredoxin
D JG479_11180 GrxA family glutaredoxin K03674 grxA; glutaredoxin 1
D JG479_14435 grxC; (GenBank) glutaredoxin 3 K03676 grxC; glutaredoxin 3
D JG479_09850 Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin
D JG479_01415 thiol:disulfide interchange protein DsbA/DsbL K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D JG479_01420 thiol:disulfide interchange protein DsbA/DsbL K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D JG479_04760 dsbB; (GenBank) disulfide bond formation protein DsbB K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9]
D JG479_13655 dsbC; (GenBank) bifunctional protein-disulfide isomerase/oxidoreductase DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D JG479_01015 protein-disulfide reductase DsbD K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16]
D JG479_04715 redoxin family protein K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
C 04131 Membrane trafficking [BR:pslc04131]
D JG479_19425 ndk; (GenBank) nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D JG479_18325 TMEM165/GDT1 family protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D JG479_05935 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D JG479_07080 gap; (GenBank) type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D JG479_07310 pyk; (GenBank) pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D JG479_09895 htpG; (GenBank) molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system
C 03051 Proteasome [BR:pslc03051]
D JG479_09895 htpG; (GenBank) molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:pslc03032]
D JG479_19650 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D JG479_06685 HU family DNA-binding protein K05787 hupA; DNA-binding protein HU-alpha
D JG479_05095 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D JG479_17240 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D JG479_05925 ihfA; (GenBank) integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D JG479_07460 ihfB; (GenBank) integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D JG479_00005 dnaA; (GenBank) chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D JG479_13275 dnaB; (GenBank) replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D JG479_14500 dnaG; (GenBank) DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D JG479_02005 ssb; (GenBank) single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D JG479_05310 dnaE; (GenBank) DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D JG479_00010 dnaN; (GenBank) DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D JG479_13205 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D JG479_10925 holA; (GenBank) DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D JG479_06485 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D JG479_05415 VRR-NUC domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D JG479_07505 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D JG479_12995 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D JG479_09920 dnaX; (GenBank) DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D JG479_05305 rnhB; (GenBank) ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D JG479_01590 polA; (GenBank) DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D JG479_10580 ligA; (GenBank) NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D JG479_16755 DNA replication terminus site-binding protein K10748 tus; DNA replication terminus site-binding protein
D JG479_01820 Dam family site-specific DNA-(adenine-N6)-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D JG479_08290 seqA; (GenBank) replication initiation negative regulator SeqA K03645 seqA; negative modulator of initiation of replication
D JG479_05910 hda; (GenBank) DnaA regulatory inactivator Hda K10763 hda; DnaA-homolog protein
D JG479_07435 gyrA; (GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D JG479_00020 gyrB; (GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D JG479_13835 parC; (GenBank) DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D JG479_13845 parE; (GenBank) DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D JG479_07005 topA; (GenBank) type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D JG479_12335 DNA topoisomerase IB K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D JG479_12780 DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:pslc03036]
D JG479_19650 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D JG479_04215 rnc; (GenBank) ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D JG479_05490 H-NS histone family protein K03746 hns; DNA-binding protein H-NS
D JG479_06685 HU family DNA-binding protein K05787 hupA; DNA-binding protein HU-alpha
D JG479_05095 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D JG479_17240 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D JG479_05925 ihfA; (GenBank) integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D JG479_07460 ihfB; (GenBank) integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D JG479_15820 DnaJ domain-containing protein K05516 cbpA; curved DNA-binding protein
D JG479_15815 chaperone modulator CbpM K18997 cbpM; chaperone modulatory protein CbpM
D JG479_00005 dnaA; (GenBank) chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D JG479_03035 SIS domain-containing protein K12961 diaA; DnaA initiator-associating protein
D JG479_00400 DNA starvation/stationary phase protection protein K04047 dps; starvation-inducible DNA-binding protein
D JG479_03455 dps; (GenBank) DNA starvation/stationary phase protection protein Dps K04047 dps; starvation-inducible DNA-binding protein
D JG479_14520 fis; (GenBank) DNA-binding transcriptional regulator Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D JG479_14900 hfq; (GenBank) RNA chaperone Hfq K03666 hfq; host factor-I protein
D JG479_19175 LysR family transcriptional regulator ArgP K05596 argP; LysR family transcriptional regulator, arginine and lysine transport system/DNA replication regulator
D JG479_00295 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D JG479_04110 winged helix-turn-helix transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D JG479_08720 lrp; (GenBank) leucine-responsive transcriptional regulator Lrp K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D JG479_06405 yejK; (GenBank) nucleoid-associated protein YejK K06899 ndpA; nucleoid-associated protein
D JG479_10590 AAA family ATPase K03529 smc; chromosome segregation protein
D JG479_06735 segregation/condensation protein A K05896 scpA; segregation and condensation protein A
D JG479_06970 scpB; (GenBank) SMC-Scp complex subunit ScpB K06024 scpB; segregation and condensation protein B
D JG479_03170 ftsA; (GenBank) cell division protein FtsA K03590 ftsA; cell division protein FtsA
D JG479_12425 ftsB; (GenBank) cell division protein FtsB K05589 ftsB; cell division protein FtsB
D JG479_14475 ftsE; (GenBank) cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D JG479_03120 peptidoglycan glycosyltransferase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D JG479_08715 DNA translocase FtsK 4TM domain-containing protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D JG479_03115 ftsL; (GenBank) cell division protein FtsL K03586 ftsL; cell division protein FtsL
D JG479_01740 SPOR domain-containing protein K03591 ftsN; cell division protein FtsN
D JG479_03165 cell division protein FtsQ/DivIB K03589 ftsQ; cell division protein FtsQ
D JG479_03145 ftsW; (GenBank) cell division protein FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D JG479_14470 ftsX; (GenBank) cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D JG479_03175 ftsZ; (GenBank) cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D JG479_19290 cell division FtsZ family protein K03531 ftsZ; cell division protein FtsZ
D JG479_10585 zipA; (GenBank) cell division protein ZipA K03528 zipA; cell division protein ZipA
D JG479_14770 cell division protein ZapA K09888 zapA; cell division protein ZapA
D JG479_08445 cell division protein ZapC K18657 zapC; cell division protein ZapC
D JG479_02645 AFG1 family ATPase K06916 zapE; cell division protein ZapE
D JG479_02990 AFG1 family ATPase K06916 zapE; cell division protein ZapE
D JG479_14915 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D JG479_04065 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D JG479_18110 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D JG479_17030 minC; (GenBank) septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D JG479_17035 minD; (GenBank) septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D JG479_17040 minE; (GenBank) cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D JG479_14165 slmA; (GenBank) nucleoid occlusion factor SlmA K05501 slmA; TetR/AcrR family transcriptional regulator
D JG479_08290 seqA; (GenBank) replication initiation negative regulator SeqA K03645 seqA; negative modulator of initiation of replication
D JG479_02120 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D JG479_02125 mreC; (GenBank) rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D JG479_02130 mreD; (GenBank) rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D JG479_10950 rodA; (GenBank) rod shape-determining protein RodA K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D JG479_04655 ParA family protein K03496 parA; chromosome partitioning protein
D JG479_16515 ParA family protein K03496 parA; chromosome partitioning protein
D JG479_16745 AAA family ATPase K03496 parA; chromosome partitioning protein
D JG479_16510 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D JG479_16740 transcriptional regulator K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D JG479_13835 parC; (GenBank) DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D JG479_13845 parE; (GenBank) DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D JG479_16525 mnmG; (GenBank) tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D JG479_16520 rsmG; (GenBank) 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D JG479_16035 tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D JG479_13660 xerD; (GenBank) site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D JG479_06835 apbC; (GenBank) iron-sulfur cluster carrier protein ApbC K03593 mrp; ATP-binding protein involved in chromosome partitioning
D JG479_01605 YihA family ribosome biogenesis GTP-binding protein K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:pslc03400]
D JG479_18265 methylated-DNA--[protein]-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D JG479_11895 deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D JG479_17285 phrB; (GenBank) deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D JG479_13720 ung; (GenBank) uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D JG479_13410 mutY; (GenBank) A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D JG479_10390 nth; (GenBank) endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D JG479_18015 S1/P1 nuclease K05986 NUCS; nuclease S1 [EC:3.1.30.1]
D JG479_01655 mutT; (GenBank) 8-oxo-dGTP diphosphatase MutT K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D JG479_13125 NUDIX domain-containing protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D JG479_11130 cryptochrome/photolyase family protein K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13]
D JG479_18270 DNA-3-methyladenine glycosylase 2 family protein K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D JG479_04515 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D JG479_14130 mutM; (GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D JG479_06955 xthA; (GenBank) exodeoxyribonuclease III K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2]
D JG479_13650 recJ; (GenBank) single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D JG479_10580 ligA; (GenBank) NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D JG479_01590 polA; (GenBank) DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D JG479_01865 uvrA; (GenBank) excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D JG479_18510 uvrA; (GenBank) excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D JG479_10320 uvrB; (GenBank) excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D JG479_15120 uvrD; (GenBank) DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D JG479_01245 rpoB; (GenBank) DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D JG479_01250 rpoC; (GenBank) DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D JG479_15155 rpoA; (GenBank) DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D JG479_00970 rpoZ; (GenBank) DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D JG479_06315 mfd; (GenBank) transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D JG479_12380 mutS; (GenBank) DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D JG479_14910 mutL; (GenBank) DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D JG479_04265 mutH; (GenBank) DNA mismatch repair endonuclease MutH K03573 mutH; DNA mismatch repair protein MutH
D JG479_09590 sbcB; (GenBank) exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D JG479_03865 xseA; (GenBank) exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D JG479_12800 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D JG479_05310 dnaE; (GenBank) DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D JG479_00010 dnaN; (GenBank) DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D JG479_13205 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D JG479_10925 holA; (GenBank) DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D JG479_06485 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D JG479_05415 VRR-NUC domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D JG479_07505 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D JG479_12995 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D JG479_09920 dnaX; (GenBank) DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D JG479_02005 ssb; (GenBank) single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D JG479_01820 Dam family site-specific DNA-(adenine-N6)-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D JG479_06210 recB; (GenBank) exodeoxyribonuclease V subunit beta K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D JG479_06205 recC; (GenBank) exodeoxyribonuclease V subunit gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D JG479_06215 recD; (GenBank) exodeoxyribonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D JG479_12370 recA; (GenBank) recombinase RecA K03553 recA; recombination protein RecA
D JG479_06060 ruvA; (GenBank) Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D JG479_06065 ruvB; (GenBank) Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D JG479_06055 ruvC; (GenBank) crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D JG479_01745 priA; (GenBank) primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D JG479_13305 priB; (GenBank) primosomal replication protein N K02686 priB; primosomal replication protein N
D JG479_05445 primosomal replication protein K04067 priC; primosomal replication protein N''
D JG479_05960 DUF349 domain-containing protein K03546 sbcC; DNA repair protein SbcC/Rad50
D JG479_19995 AAA family ATPase K03546 sbcC; DNA repair protein SbcC/Rad50
D JG479_20000 exonuclease SbcCD subunit D C-terminal domain-containing protein K03547 sbcD; DNA repair protein SbcD/Mre11
D JG479_03955 radA; (GenBank) DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D JG479_00015 recF; (GenBank) DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF
D JG479_00935 recG; (GenBank) ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D JG479_04225 recO; (GenBank) DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D JG479_09910 recR; (GenBank) recombination protein RecR K06187 recR; recombination protein RecR
D JG479_09790 recN; (GenBank) DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D JG479_12890 rdgC; (GenBank) recombination-associated protein RdgC K03554 rdgC; recombination associated protein RdgC
D JG479_05495 DEAD/DEAH box helicase K19789 radD; DNA repair protein RadD
D JG479_07435 gyrA; (GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D JG479_00020 gyrB; (GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D JG479_07005 topA; (GenBank) type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D JG479_12335 DNA topoisomerase IB K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D JG479_06685 HU family DNA-binding protein K05787 hupA; DNA-binding protein HU-alpha
D JG479_05095 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D JG479_17240 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D JG479_14520 fis; (GenBank) DNA-binding transcriptional regulator Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D JG479_05925 ihfA; (GenBank) integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D JG479_07460 ihfB; (GenBank) integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D JG479_13780 recQ; (GenBank) DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D JG479_19605 RecQ family ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D JG479_05490 H-NS histone family protein K03746 hns; DNA-binding protein H-NS
D JG479_03665 dinB; (GenBank) DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D JG479_16870 Y-family DNA polymerase K03502 umuC; DNA polymerase V
D JG479_16865 S24 family peptidase K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D JG479_15795 lexA; (GenBank) repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D JG479_05460 DNA polymerase II K02336 polB; DNA polymerase II [EC:2.7.7.7]
D JG479_13525 regulatory protein RecX K03565 recX; regulatory protein
D JG479_01570 rep; (GenBank) DNA helicase Rep K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4]
D JG479_06000 UvrD-helicase domain-containing protein K03658 helD; DNA helicase IV [EC:5.6.2.4]
D JG479_05455 dinG; (GenBank) ATP-dependent DNA helicase DinG K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D JG479_17085 ATP-dependent DNA helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D JG479_07420 nrdA; (GenBank) ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D JG479_07415 nrdB; (GenBank) ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:pslc03029]
D JG479_03010 cytochrome b N-terminal domain-containing protein K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D JG479_11105 infB; (GenBank) translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D JG479_07265 infC; (GenBank) translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D JG479_05210 tsf; (GenBank) elongation factor Ts K02357 tsf; elongation factor Ts
D JG479_00625 tuf; (GenBank) elongation factor Tu K02358 tuf; elongation factor Tu
D JG479_01270 tuf; (GenBank) elongation factor Tu K02358 tuf; elongation factor Tu
D JG479_00435 elongation factor G K02355 fusA; elongation factor G
D JG479_01265 fusA; (GenBank) elongation factor G K02355 fusA; elongation factor G
D JG479_04220 era; (GenBank) GTPase Era K03595 era; GTPase
D JG479_13460 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D JG479_10915 leuS; (GenBank) leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D JG479_05710 aspS; (GenBank) aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D JG479_03925 argS; (GenBank) arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D JG479_02005 ssb; (GenBank) single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D JG479_05245 bamA; (GenBank) outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family
D JG479_17945 dnaK; (GenBank) molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D JG479_09770 grpE; (GenBank) nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D JG479_00995 groL; (GenBank) chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D JG479_01000 co-chaperone GroES K04078 groES; chaperonin GroES
D JG479_17940 dnaJ; (GenBank) molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D JG479_02205 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D JG479_10190 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D JG479_02220 hscB; (GenBank) co-chaperone HscB K04082 hscB; molecular chaperone HscB
D JG479_09850 Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin
D JG479_06835 apbC; (GenBank) iron-sulfur cluster carrier protein ApbC K03593 mrp; ATP-binding protein involved in chromosome partitioning
D JG479_12070 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D JG479_15750 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D JG479_15780 cytochrome c oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D JG479_15755 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D JG479_16540 yidC; (GenBank) membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D JG479_15765 SURF1 family protein K14998 SURF1; surfeit locus 1 family protein
D JG479_15745 SCO family protein K07152 SCO1; protein SCO1
D JG479_09895 htpG; (GenBank) molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:pslc02000]
D JG479_08410 msbA; (GenBank) lipid A export permease/ATP-binding protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D JG479_15015 peptidase domain-containing ABC transporter K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D JG479_07105 ABC transporter ATP-binding protein/permease K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
D JG479_08635 ABC transporter ATP-binding protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D JG479_15350 ATP-binding cassette domain-containing protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D JG479_04385 type I secretion system permease/ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D JG479_05275 cydC; (GenBank) thiol reductant ABC exporter subunit CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D JG479_05280 cydD; (GenBank) thiol reductant ABC exporter subunit CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D JG479_08430 ABC transporter ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein
D JG479_09225 modA; (GenBank) molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D JG479_09220 modB; (GenBank) molybdate ABC transporter permease subunit K02018 modB; molybdate transport system permease protein
D JG479_09215 ATP-binding cassette domain-containing protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D JG479_01490 ATP-binding cassette domain-containing protein K05776 modF; molybdate transport system ATP-binding protein
D JG479_08150 extracellular solute-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D JG479_14310 Fe(3+) ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D JG479_08155 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D JG479_14305 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D JG479_08160 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D JG479_14300 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D JG479_14845 extracellular solute-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D JG479_18660 ABC transporter substrate-binding protein K05777 ynjB; putative thiamine transport system substrate-binding protein
D JG479_18665 ABC transporter permease subunit K05778 ynjC; putative thiamine transport system permease protein
D JG479_18670 ATP-binding cassette domain-containing protein K05779 ynjD; putative thiamine transport system ATP-binding protein
D JG479_07855 ABC transporter ATP-binding protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D JG479_07840 sugar ABC transporter substrate-binding protein K10227 smoE; polyol transport system substrate-binding protein
D JG479_07845 sugar ABC transporter permease K10228 smoF; polyol transport system permease protein
D JG479_07850 carbohydrate ABC transporter permease K10229 smoG; polyol transport system permease protein
D JG479_18975 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D JG479_18985 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D JG479_18980 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D JG479_18990 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D JG479_02950 mlaD; (GenBank) outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D JG479_02945 mlaE; (GenBank) lipid asymmetry maintenance ABC transporter permease subunit MlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D JG479_02940 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D JG479_02955 ABC transporter substrate-binding protein K07323 mlaC; phospholipid transport system substrate-binding protein
D JG479_10235 ABC transporter substrate-binding protein K07323 mlaC; phospholipid transport system substrate-binding protein
D JG479_02960 STAS domain-containing protein K07122 mlaB; phospholipid transport system transporter-binding protein
D JG479_12955 phosphate ABC transporter substrate-binding protein PstS family protein K02040 pstS; phosphate transport system substrate-binding protein
D JG479_14700 ABC transporter permease subunit K02037 pstC; phosphate transport system permease protein
D JG479_14695 pstA; (GenBank) phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D JG479_14690 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D JG479_03580 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D JG479_05025 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D JG479_10355 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D JG479_14745 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D JG479_16980 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D JG479_17955 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D JG479_18120 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D JG479_18260 amino acid ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D JG479_19685 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D JG479_19690 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D JG479_19800 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D JG479_05130 ABC transporter substrate-binding protein K19226 sapA; cationic peptide transport system substrate-binding protein
D JG479_05125 ABC transporter permease K19227 sapB; cationic peptide transport system permease protein
D JG479_05120 ABC transporter permease subunit K19228 sapC; cationic peptide transport system permease protein
D JG479_05115 ATP-binding cassette domain-containing protein K19229 sapD; cationic peptide transport system ATP-binding protein
D JG479_05110 ATP-binding cassette domain-containing protein K19230 sapF; cationic peptide transport system ATP-binding protein
D JG479_16630 ABC transporter substrate-binding protein K25132 hmuT; heme transport system substrate-binding protein
D JG479_16635 iron ABC transporter permease K25133 hmuU; heme transport system permease protein
D JG479_16640 heme ABC transporter ATP-binding protein K10834 hmuV; heme transport system ATP-binding protein [EC:7.6.2.5]
D JG479_13740 iron ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein
D JG479_13745 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D JG479_13725 cobalamin-binding protein K06858 btuF; vitamin B12 transport system substrate-binding protein
D JG479_02360 ABC transporter permease K09688 kpsM; capsular polysaccharide transport system permease protein
D JG479_02370 lipopolysaccharide biosynthesis protein K10107 kpsE; capsular polysaccharide transport system permease protein
D JG479_02365 ABC transporter ATP-binding protein K09689 kpsT; capsular polysaccharide transport system ATP-binding protein [EC:7.6.2.12]
D JG479_13195 lptF; (GenBank) LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein
D JG479_13190 lptG; (GenBank) LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein
D JG479_02910 lptB; (GenBank) LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D JG479_08235 ABC transporter permease K09696 natB; sodium transport system permease protein
D JG479_08240 ATP-binding cassette domain-containing protein K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D JG479_07220 lipoprotein-releasing ABC transporter permease subunit K09808 lolC_E_F; lipoprotein-releasing system permease protein
D JG479_07230 lipoprotein-releasing ABC transporter permease subunit K09808 lolC_E_F; lipoprotein-releasing system permease protein
D JG479_07225 lolD; (GenBank) lipoprotein-releasing ABC transporter ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D JG479_04700 ccmD; (GenBank) heme exporter protein CcmD K02196 ccmD; heme exporter protein D
D JG479_04695 heme ABC transporter permease K02195 ccmC; heme exporter protein C
D JG479_04690 ccmB; (GenBank) heme exporter protein CcmB K02194 ccmB; heme exporter protein B
D JG479_04685 ccmA; (GenBank) cytochrome c biogenesis heme-transporting ATPase CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D JG479_14470 ftsX; (GenBank) cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D JG479_14475 ftsE; (GenBank) cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D JG479_12545 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D JG479_15290 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D JG479_12550 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D JG479_06050 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein
D JG479_09830 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D JG479_09835 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein
D JG479_14120 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D JG479_15275 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D JG479_06045 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D JG479_09825 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D JG479_14115 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D JG479_15270 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D JG479_14185 sodium:solute symporter K14388 SLC5A8_12; solute carrier family 5 (sodium-coupled monocarboxylate transporter), member 8/12
D JG479_17900 SLC13/DASS family transporter K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D JG479_08810 MATE family efflux transporter K26939 norM; MATE family, multidrug efflux pump
D JG479_10325 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D JG479_15695 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D JG479_19200 MFS transporter K02532 lacY; MFS transporter, OHS family, lactose permease
D JG479_09295 sugar MFS transporter K02429 fucP; MFS transporter, FHS family, L-fucose permease
D JG479_16975 sugar MFS transporter K02429 fucP; MFS transporter, FHS family, L-fucose permease
D JG479_10445 MFS transporter K08191 exuT; MFS transporter, ACS family, aldohexuronate transporter
D JG479_03560 MFS transporter K25494 nimT; MFS transporter, CP family, 2-nitroimidazole transporter
D JG479_19110 arsJ; (GenBank) organoarsenical effux MFS transporter ArsJ K25223 arsJ; MFS transporter, APGE family, 1-arseno-3-phosphoglycerate exporter
D JG479_09205 NarK family nitrate/nitrite MFS transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D JG479_12170 MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D JG479_09765 Bcr/CflA family efflux MFS transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D JG479_11750 multidrug effflux MFS transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D JG479_11940 MFS transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D JG479_17605 MFS transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D JG479_03910 MFS transporter K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D JG479_14825 MFS transporter K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein
D JG479_04275 ptsP; (GenBank) phosphoenolpyruvate--protein phosphotransferase K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D JG479_02885 HPr family phosphocarrier protein K08485 ptsO; phosphocarrier protein NPr
D JG479_06920 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D JG479_02895 ptsN; (GenBank) PTS IIA-like nitrogen regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D JG479_13985 ion transporter K10716 kch; voltage-gated potassium channel
D JG479_15005 two pore domain potassium channel family protein K10716 kch; voltage-gated potassium channel
D JG479_16900 ion transporter K08714 VGSC; voltage-gated sodium channel
D JG479_12220 ammonium transporter K03320 amt; ammonium transporter, Amt family
D JG479_03225 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D JG479_08660 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D JG479_11220 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D JG479_19520 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D JG479_19590 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D JG479_03020 sspA; (GenBank) stringent starvation protein A K03599 sspA; stringent starvation protein A
D JG479_03780 marine proteobacterial sortase target protein K07114 yfbK; Ca-activated chloride channel homolog
D JG479_11315 VWA domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog
D JG479_11320 VWA domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog
D JG479_08545 Bax inhibitor-1/YccA family protein K19416 yccA; modulator of FtsH protease
D JG479_02275 mechanosensitive ion channel K03442 mscS; small conductance mechanosensitive channel
D JG479_03060 mechanosensitive ion channel family protein K03442 mscS; small conductance mechanosensitive channel
D JG479_03470 mechanosensitive ion channel K03442 mscS; small conductance mechanosensitive channel
D JG479_04130 mechanosensitive ion channel family protein K03442 mscS; small conductance mechanosensitive channel
D JG479_13700 mechanosensitive ion channel family protein K03442 mscS; small conductance mechanosensitive channel
D JG479_19145 mechanosensitive ion channel K03442 mscS; small conductance mechanosensitive channel
D JG479_15365 mechanosensitive ion channel family protein K16053 ybdG; miniconductance mechanosensitive channel
D JG479_02880 mgtE; (GenBank) magnesium transporter K06213 mgtE; magnesium transporter
D JG479_12270 magnesium transporter K06213 mgtE; magnesium transporter
D JG479_04645 flagellar motor protein K02556 motA; chemotaxis protein MotA
D JG479_12795 pomA; (GenBank) flagellar motor protein PomA K02556 motA; chemotaxis protein MotA
D JG479_04650 OmpA family protein K02557 motB; chemotaxis protein MotB
D JG479_12790 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D JG479_14875 sel1 repeat family protein K21217 motX; sodium-type polar flagellar protein MotX
D JG479_11415 OmpA family protein K21218 motY; sodium-type flagellar protein MotY
D JG479_02665 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D JG479_02670 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D JG479_09975 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D JG479_09980 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D JG479_16945 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D JG479_16950 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D JG479_02660 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD
D JG479_06370 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD
D JG479_09970 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD
D JG479_16940 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD
D JG479_06070 tolQ; (GenBank) protein TolQ K03562 tolQ; biopolymer transport protein TolQ
D JG479_06075 tolR; (GenBank) protein TolR K03560 tolR; biopolymer transport protein TolR
D JG479_13815 zinc transporter ZntB K16074 zntB; zinc transporter
D JG479_08700 crcB; (GenBank) fluoride efflux transporter CrcB K06199 crcB; fluoride exporter
D JG479_12265 DUF21 domain-containing protein K16302 CNNM; metal transporter CNNM
D JG479_11500 DUF21 domain-containing protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D JG479_15050 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D JG479_18115 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D JG479_19545 porin K07221 oprO_P; phosphate-selective porin OprO and OprP
D JG479_00875 OmpA family protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D JG479_08210 outer membrane beta-barrel protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D JG479_05385 outer membrane protein transport protein K06076 fadL; long-chain fatty acid transport protein
D JG479_13215 outer membrane protein transport protein K06076 fadL; long-chain fatty acid transport protein
D JG479_02680 TonB-dependent siderophore receptor K16090 fiu; catecholate siderophore receptor
D JG479_03305 TonB-dependent receptor K16091 fecA; Fe(3+) dicitrate transport protein
D JG479_04050 TonB-dependent receptor K16092 btuB; vitamin B12 transporter
D JG479_09655 TonB-dependent receptor K16092 btuB; vitamin B12 transporter
D JG479_12365 TonB-dependent siderophore receptor K16088 TC.FEV.OM1; outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid
D JG479_03520 TonB-dependent receptor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D JG479_16625 TonB-dependent hemoglobin/transferrin/lactoferrin family receptor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D JG479_00910 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D JG479_02725 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D JG479_03450 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D JG479_03570 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D JG479_04965 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D JG479_05365 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D JG479_05465 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D JG479_05475 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D JG479_06190 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D JG479_06295 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D JG479_06365 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D JG479_07020 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D JG479_07365 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D JG479_09340 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D JG479_10415 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D JG479_11785 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D JG479_11930 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D JG479_14190 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D JG479_14220 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D JG479_15330 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D JG479_15930 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D JG479_16295 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D JG479_16385 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D JG479_17330 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D JG479_18230 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D JG479_18305 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D JG479_18475 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D JG479_19230 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D JG479_19265 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D JG479_19390 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D JG479_19405 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D JG479_19730 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D JG479_19860 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D JG479_01905 TolC family protein K15725 czcC; outer membrane protein, heavy metal efflux system
D JG479_13055 TolC family protein K15725 czcC; outer membrane protein, heavy metal efflux system
D JG479_15530 TolC family protein K15725 czcC; outer membrane protein, heavy metal efflux system
D JG479_14725 TolC family protein K07796 cusC; outer membrane protein, copper/silver efflux system
D JG479_13870 tolC; (GenBank) outer membrane channel protein TolC K12340 tolC; outer membrane protein
D JG479_04390 TolC family outer membrane protein K12543 lapE; outer membrane protein, adhesin transport system
D JG479_17835 TolC family protein K18300 oprN; outer membrane protein, multidrug efflux system
D JG479_13165 TolC family protein K18139 oprM; outer membrane protein, multidrug efflux system
D JG479_13365 TolC family protein K18139 oprM; outer membrane protein, multidrug efflux system
D JG479_18100 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D JG479_03905 efflux transporter outer membrane subunit K18904 nodT; outer membrane protein, multidrug efflux system
D JG479_06605 polysaccharide export protein K20988 vpsN; polysaccharide biosynthesis/export protein VpsN
D JG479_02285 SLBB domain-containing protein K01991 wza; polysaccharide biosynthesis/export protein
D JG479_05245 bamA; (GenBank) outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family
D JG479_19460 bamB; (GenBank) outer membrane protein assembly factor BamB K17713 bamB; outer membrane protein assembly factor BamB
D JG479_10255 bamC; (GenBank) outer membrane protein assembly factor BamC K07287 bamC; outer membrane protein assembly factor BamC
D JG479_11535 outer membrane protein assembly factor BamD K05807 bamD; outer membrane protein assembly factor BamD
D JG479_04795 outer membrane protein assembly factor BamE K06186 bamE; outer membrane protein assembly factor BamE
D JG479_05505 outer membrane protein assembly factor K07278 tamA; translocation and assembly module TamA
D JG479_05510 translocation/assembly module TamB K09800 tamB; translocation and assembly module TamB
D JG479_02915 lptA; (GenBank) lipopolysaccharide transport periplasmic protein LptA K09774 lptA; lipopolysaccharide export system protein LptA
D JG479_02920 lptC; (GenBank) LPS export ABC transporter periplasmic protein LptC K11719 lptC; lipopolysaccharide export system protein LptC
D JG479_02610 lptD; (GenBank) LPS assembly protein LptD K04744 lptD; LPS-assembly protein
D JG479_10920 hypothetical protein K03643 lptE; LPS-assembly lipoprotein
D JG479_11710 BCSC C-terminal domain-containing protein K20543 bcsC; cellulose synthase operon protein C
D JG479_06600 outer membrane beta-barrel protein K20920 vpsM; polysaccharide biosynthesis protein VpsM
D JG479_04825 MipA/OmpV family protein K07274 mipA; MipA family protein
D JG479_04885 MipA/OmpV family protein K07274 mipA; MipA family protein
D JG479_10845 corC; (GenBank) CNNM family magnesium/cobalt transport protein CorC K06189 corC; hemolysin (HlyC) family protein
D JG479_04140 CidA/LrgA family protein K06518 cidA; holin-like protein
D JG479_07040 MFS transporter K16211 malY; maltose/moltooligosaccharide transporter
D JG479_19755 eat; (GenBank) ethanolamine permease K16238 eat; ethanolamine permease
D JG479_01895 cation transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein
D JG479_15550 cation transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein
D JG479_18295 cation transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein
D JG479_18350 cation transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein
D JG479_14415 cation diffusion facilitator family transporter K13283 fieF; ferrous-iron efflux pump FieF
D JG479_01915 CusA/CzcA family heavy metal efflux RND transporter K15726 czcA; heavy metal efflux system protein
D JG479_13045 CusA/CzcA family heavy metal efflux RND transporter K15726 czcA; heavy metal efflux system protein
D JG479_15540 efflux RND transporter permease subunit K15726 czcA; heavy metal efflux system protein
D JG479_14715 efflux RND transporter permease subunit K07787 cusA; copper/silver efflux system protein
D JG479_17840 multidrug efflux RND transporter permease subunit K18299 mexF; multidrug efflux pump
D JG479_04060 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D JG479_18105 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D JG479_16090 multidrug efflux SMR transporter K11741 sugE; quaternary ammonium compound-resistance protein SugE
D JG479_18460 DMT family transporter K11939 rhtA; inner membrane transporter RhtA
D JG479_13770 rarD; (GenBank) EamA family transporter RarD K05786 rarD; chloramphenicol-sensitive protein RarD
D JG479_10645 YnfA family protein K09771 TC.SMR3; small multidrug resistance family-3 protein
D JG479_17160 gntU; (GenBank) gluconate transporter K06156 gntU; Gnt-I system low-affinity gluconate transporter
D JG479_07810 Na+/H+ antiporter family protein K07084 yuiF; putative amino acid transporter
D JG479_17520 BCCT family transporter K05020 opuD; glycine betaine transporter
D JG479_05180 BCCT family transporter K02168 betT; choline/glycine/proline betaine transport protein
D JG479_02935 calcium/sodium antiporter K07301 yrbG; cation:H+ antiporter
D JG479_13005 cation acetate symporter K14393 actP; cation/acetate symporter
D JG479_08490 nhaC; (GenBank) Na+/H+ antiporter NhaC K03315 nhaC; Na+:H+ antiporter, NhaC family
D JG479_17975 sodium:proton antiporter K18218 tet35; tetracycline resistance efflux pump
D JG479_16785 cation:proton antiporter K24160 NHA1; sodium/hydrogen antiporter
D JG479_13590 potassium/proton antiporter K11105 cvrA; potassium/hydrogen antiporter
D JG479_09530 sodium:proton antiporter K03316 nhaP; Na+:H+ antiporter
D JG479_17090 sodium:proton antiporter K03316 nhaP; Na+:H+ antiporter
D JG479_16305 cation:proton antiporter K11747 kefB; glutathione-regulated potassium-efflux system protein KefB
D JG479_05335 cation:proton antiporter K03455 KEA1_2_3; K+:H+ antiporter
D JG479_00075 potassium transporter K03498 trkH; trk/ktr system potassium uptake protein
D JG479_08885 Ktr system potassium transporter B K03498 trkH; trk/ktr system potassium uptake protein
D JG479_00100 trkA; (GenBank) Trk system potassium transporter TrkA K03499 trkA; trk/ktr system potassium uptake protein
D JG479_08880 TrkA family potassium uptake protein K03499 trkA; trk/ktr system potassium uptake protein
D JG479_14210 cytosine permease K10974 codB; cytosine permease
D JG479_17670 uracil-xanthine permease K02824 uraA; uracil permease
D JG479_18970 purine permease K16345 xanP; xanthine permease XanP
D JG479_10075 NCS2 family permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D JG479_11425 amino acid permease K03834 tyrP; tyrosine-specific transport protein
D JG479_01155 HAAAP family serine/threonine permease K03837 sdaC; serine transporter
D JG479_19890 benzoate/H(+) symporter BenE family transporter K05782 benE; benzoate membrane transport protein
D JG479_12190 chloride channel protein K03281 clcA; chloride channel protein, CIC family
D JG479_15360 chrA; (GenBank) chromate efflux transporter K07240 chrA; chromate transporter
D JG479_07295 SulP family inorganic anion transporter K03321 TC.SULP; sulfate permease, SulP family
D JG479_09070 SulP family inorganic anion transporter K03321 TC.SULP; sulfate permease, SulP family
D JG479_08670 Nramp family divalent metal transporter K03322 mntH; manganese transport protein
D JG479_02020 arsB; (GenBank) ACR3 family arsenite efflux transporter K03325 ACR3; arsenite transporter
D JG479_11070 monovalent cation/H+ antiporter subunit A K05559 phaA; multicomponent K+:H+ antiporter subunit A
D JG479_11065 Na+/H+ antiporter subunit C K05560 phaC; multicomponent K+:H+ antiporter subunit C
D JG479_11060 monovalent cation/H+ antiporter subunit D K05561 phaD; multicomponent K+:H+ antiporter subunit D
D JG479_11055 Na+/H+ antiporter subunit E K05562 phaE; multicomponent K+:H+ antiporter subunit E
D JG479_11050 K+/H+ antiporter subunit F K05563 phaF; multicomponent K+:H+ antiporter subunit F
D JG479_11045 Na+/H+ antiporter subunit G K05564 phaG; multicomponent K+:H+ antiporter subunit G
D JG479_11615 murJ; (GenBank) murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D JG479_11245 AEC family transporter K13936 mdcF; malonate transporter and related proteins
D JG479_19180 LysE family transporter K06895 lysE; L-lysine exporter family protein LysE/ArgO
D JG479_18565 LysE family translocator K05834 rhtB; homoserine/homoserine lactone efflux protein
D JG479_14570 LysE family transporter K05835 rhtC; threonine efflux protein
D JG479_15335 LysE family translocator K05835 rhtC; threonine efflux protein
D JG479_00365 AzlC family ABC transporter permease K26605 azlC; branched chain amino acid efflux pump
D JG479_00360 AzlD domain-containing protein K26606 azlD; branched chain amino acid efflux pump
D JG479_10195 AI-2E family transporter K03548 perM; putative permease
D JG479_02815 MarC family protein K05595 marC; multiple antibiotic resistance protein
D JG479_08000 MarC family protein K05595 marC; multiple antibiotic resistance protein
D JG479_03145 ftsW; (GenBank) cell division protein FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D JG479_18325 TMEM165/GDT1 family protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D JG479_17095 FTR1 family protein K07243 FTR; high-affinity iron transporter
D JG479_09965 energy transducer TonB K03832 tonB; periplasmic protein TonB
D JG479_13560 energy transducer TonB K03832 tonB; periplasmic protein TonB
D JG479_16935 energy transducer TonB K03832 tonB; periplasmic protein TonB
D JG479_06090 pal; (GenBank) peptidoglycan-associated lipoprotein Pal K03640 pal; peptidoglycan-associated lipoprotein
D JG479_06080 tolA; (GenBank) cell envelope integrity protein TolA K03646 tolA; colicin import membrane protein
D JG479_06085 tolB; (GenBank) Tol-Pal system protein TolB K03641 tolB; TolB protein
D JG479_13480 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D JG479_13485 oadA; (GenBank) sodium-extruding oxaloacetate decarboxylase subunit alpha K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D JG479_13490 OadG family protein K01573 oadG; oxaloacetate decarboxylase (Na+ extruding) subunit gamma
D JG479_03915 HlyD family secretion protein K03543 emrA; membrane fusion protein, multidrug efflux system
D JG479_01910 efflux RND transporter periplasmic adaptor subunit K15727 czcB; membrane fusion protein, heavy metal efflux system
D JG479_13050 efflux RND transporter periplasmic adaptor subunit K15727 czcB; membrane fusion protein, heavy metal efflux system
D JG479_15535 efflux RND transporter periplasmic adaptor subunit K15727 czcB; membrane fusion protein, heavy metal efflux system
D JG479_14720 efflux RND transporter periplasmic adaptor subunit K07798 cusB; membrane fusion protein, copper/silver efflux system
D JG479_04380 HlyD family type I secretion periplasmic adaptor subunit K12542 lapC; membrane fusion protein, adhesin transport system
D JG479_15035 HlyD family efflux transporter periplasmic adaptor subunit K13408 cvaA; membrane fusion protein
D JG479_17845 efflux RND transporter periplasmic adaptor subunit K18298 mexE; membrane fusion protein, multidrug efflux system
D JG479_04065 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D JG479_18110 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D JG479_06610 polysaccharide biosynthesis tyrosine autokinase K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D JG479_03030 yraP; (GenBank) divisome-associated lipoprotein YraP K28369 dolP; outer membrane lipoprotein DolP
D JG479_13255 nicotinamide mononucleotide transporter K03811 pnuC; nicotinamide mononucleotide transporter
D JG479_17960 paraquat-inducible protein A K03808 pqiA; intermembrane transport protein PqiA/LetA
D JG479_17965 pqiB; (GenBank) intermembrane transport protein PqiB K06192 pqiB; intermembrane transport protein PqiB/LetB
D JG479_17970 membrane integrity-associated transporter subunit PqiC K09857 pqiC; intermembrane transport lipoprotein PqiC
D JG479_04710 heme lyase CcmF/NrfE family subunit K02198 ccmF; cytochrome c-type biogenesis protein CcmF
D JG479_07165 MgtC/SapB family protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
D JG479_07195 MgtC/SapB family protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
D JG479_19015 uraH; (GenBank) hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
D JG479_15465 CopD family protein K07245 pcoD; copper resistance protein D
D JG479_15470 copper resistance protein CopC K07156 copC; copper resistance protein C
C 02044 Secretion system [BR:pslc02044]
D JG479_13870 tolC; (GenBank) outer membrane channel protein TolC K12340 tolC; outer membrane protein
D JG479_04385 type I secretion system permease/ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D JG479_04380 HlyD family type I secretion periplasmic adaptor subunit K12542 lapC; membrane fusion protein, adhesin transport system
D JG479_04390 TolC family outer membrane protein K12543 lapE; outer membrane protein, adhesin transport system
D JG479_15035 HlyD family efflux transporter periplasmic adaptor subunit K13408 cvaA; membrane fusion protein
D JG479_15015 peptidase domain-containing ABC transporter K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D JG479_04090 AAA family ATPase K02450 gspA; general secretion pathway protein A
D JG479_04095 general secretion pathway protein GspB K02451 gspB; general secretion pathway protein B
D JG479_01330 gspC; (GenBank) type II secretion system protein GspC K02452 gspC; general secretion pathway protein C
D JG479_01335 gspD; (GenBank) type II secretion system secretin GspD K02453 gspD; general secretion pathway protein D
D JG479_01340 gspE; (GenBank) type II secretion system ATPase GspE K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D JG479_01345 gspF; (GenBank) type II secretion system inner membrane protein GspF K02455 gspF; general secretion pathway protein F
D JG479_01350 gspG; (GenBank) type II secretion system major pseudopilin GspG K02456 gspG; general secretion pathway protein G
D JG479_01355 prepilin-type N-terminal cleavage/methylation domain-containing protein K02457 gspH; general secretion pathway protein H
D JG479_01360 gspI; (GenBank) type II secretion system minor pseudopilin GspI K02458 gspI; general secretion pathway protein I
D JG479_01365 gspJ; (GenBank) type II secretion system minor pseudopilin GspJ K02459 gspJ; general secretion pathway protein J
D JG479_01370 gspK; (GenBank) type II secretion system minor pseudopilin GspK K02460 gspK; general secretion pathway protein K
D JG479_01375 gspL; (GenBank) type II secretion system protein GspL K02461 gspL; general secretion pathway protein L
D JG479_01380 type II secretion system protein M K02462 gspM; general secretion pathway protein M
D JG479_01385 type II secretion system protein N K02463 gspN; general secretion pathway protein N
D JG479_14375 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D JG479_14360 pilin K02650 pilA; type IV pilus assembly protein PilA
D JG479_16220 pilin K02650 pilA; type IV pilus assembly protein PilA
D JG479_14385 pilB; (GenBank) type IV-A pilus assembly ATPase PilB K02652 pilB; type IV pilus assembly protein PilB
D JG479_14370 type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC
D JG479_09065 type IV pilin protein K02655 pilE; type IV pilus assembly protein PilE
D JG479_11555 prepilin-type N-terminal cleavage/methylation domain-containing protein K02655 pilE; type IV pilus assembly protein PilE
D JG479_19435 pilW; (GenBank) type IV pilus biogenesis/stability protein PilW K02656 pilF; type IV pilus assembly protein PilF
D JG479_01780 pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
D JG479_01785 PilN domain-containing protein K02663 pilN; type IV pilus assembly protein PilN
D JG479_01790 type 4a pilus biogenesis protein PilO K02664 pilO; type IV pilus assembly protein PilO
D JG479_01795 pilus assembly protein PilP K02665 pilP; type IV pilus assembly protein PilP
D JG479_01800 type IV pilus secretin PilQ family protein K02666 pilQ; type IV pilus assembly protein PilQ
D JG479_13925 type IV pilus twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D JG479_13920 PilT/PilU family type 4a pilus ATPase K02670 pilU; twitching motility protein PilU
D JG479_09055 prepilin-type N-terminal cleavage/methylation domain-containing protein K02671 pilV; type IV pilus assembly protein PilV
D JG479_11575 pilV; (GenBank) type IV pilus modification protein PilV K02671 pilV; type IV pilus assembly protein PilV
D JG479_11570 PilW family protein K02672 pilW; type IV pilus assembly protein PilW
D JG479_11565 pilus assembly protein PilX K02673 pilX; type IV pilus assembly protein PilX
D JG479_09470 VWA domain-containing protein K02674 pilY1; type IV pilus assembly protein PilY1
D JG479_11560 pilin biogenesis protein K02674 pilY1; type IV pilus assembly protein PilY1
D JG479_06490 PilZ domain-containing protein K02676 pilZ; type IV pilus assembly protein PilZ
D JG479_09060 prepilin-type N-terminal cleavage/methylation domain-containing protein K08084 fimT; type IV fimbrial biogenesis protein FimT
D JG479_11545 GspH/FimT family pseudopilin K08084 fimT; type IV fimbrial biogenesis protein FimT
D JG479_11550 GspH/FimT family pseudopilin K08084 fimT; type IV fimbrial biogenesis protein FimT
D JG479_07895 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D JG479_07890 type II secretion system F family protein K12510 tadB; tight adherence protein B
D JG479_07885 secretion system protein K12511 tadC; tight adherence protein C
D JG479_02085 prepilin-type N-terminal cleavage/methylation domain-containing protein K10924 mshA; MSHA pilin protein MshA
D JG479_02080 prepilin-type N-terminal cleavage/methylation domain-containing protein K10925 mshB; MSHA pilin protein MshB
D JG479_02090 type II secretion system protein K10926 mshC; MSHA pilin protein MshC
D JG479_02095 prepilin-type N-terminal cleavage/methylation domain-containing protein K10927 mshD; MSHA pilin protein MshD
D JG479_02070 tadA; (GenBank) Flp pilus assembly complex ATPase component TadA K12276 mshE; MSHA biogenesis protein MshE
D JG479_02075 type II secretion system F family protein K12278 mshG; MSHA biogenesis protein MshG
D JG479_02035 MSHA biogenesis protein MshI K12279 mshI; MSHA biogenesis protein MshI
D JG479_02040 PilN domain-containing protein K12279 mshI; MSHA biogenesis protein MshI
D JG479_02045 agglutinin biogenesis protein MshJ K12280 mshJ; MSHA biogenesis protein MshJ
D JG479_02050 agglutinin biogenesis protein MshK K12281 mshK; MSHA biogenesis protein MshK
D JG479_02055 mshL; (GenBank) pilus (MSHA type) biogenesis protein MshL K12282 mshL; MSHA biogenesis protein MshL
D JG479_02060 AAA family ATPase K12283 mshM; MSHA biogenesis protein MshM
D JG479_02065 tetratricopeptide repeat protein K12284 mshN; MSHA biogenesis protein MshN
D JG479_02100 type II secretion system protein K12285 mshO; MSHA biogenesis protein MshO
D JG479_02105 agglutinin biogenesis protein MshP K12286 mshP; MSHA biogenesis protein MshP
D JG479_02110 H-type lectin domain-containing protein K12287 mshQ; MSHA biogenesis protein MshQ
D JG479_13940 YggT family protein K02221 yggT; YggT family protein
D JG479_04750 helix-hairpin-helix domain-containing protein K02237 comEA; competence protein ComEA
D JG479_08415 DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC
D JG479_04605 flhA; (GenBank) flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D JG479_04600 flhB; (GenBank) flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D JG479_04675 EscU/YscU/HrcU family type III secretion system export apparatus switch protein K04061 flhB2; flagellar biosynthesis protein
D JG479_04535 fliF; (GenBank) flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D JG479_04545 fliH; (GenBank) flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D JG479_04550 fliI; (GenBank) flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D JG479_04575 fliN; (GenBank) flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D JG479_04580 fliO; (GenBank) flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D JG479_04585 fliP; (GenBank) flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D JG479_04590 fliQ; (GenBank) flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D JG479_04595 fliR; (GenBank) flagellar type III secretion system protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D JG479_13655 dsbC; (GenBank) bifunctional protein-disulfide isomerase/oxidoreductase DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D JG479_01660 secA; (GenBank) preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D JG479_14430 secB; (GenBank) protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D JG479_07120 secD; (GenBank) protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D JG479_14640 secD; (GenBank) protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D JG479_01215 secE; (GenBank) preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D JG479_07125 secF; (GenBank) protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D JG479_14635 secF; (GenBank) protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D JG479_04935 secG; (GenBank) preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D JG479_15180 secY; (GenBank) preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D JG479_11490 ffh; (GenBank) signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D JG479_14480 ftsY; (GenBank) signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D JG479_14645 yajC; (GenBank) preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D JG479_16540 yidC; (GenBank) membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D JG479_00485 tatA; (GenBank) Sec-independent protein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA
D JG479_00480 tatB; (GenBank) Sec-independent protein translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB
D JG479_00475 tatC; (GenBank) twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:pslc02042]
D JG479_11925 TDT family transporter K11041 eta; exfoliative toxin A/B
D JG479_11500 DUF21 domain-containing protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D JG479_15050 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D JG479_18115 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D JG479_17335 hemolysin III family protein K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:pslc02022]
D JG479_12960 phoR; (GenBank) phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D JG479_12965 phoB; (GenBank) phosphate regulon transcriptional regulator PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D JG479_09260 GHKL domain-containing protein K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D JG479_09255 response regulator transcription factor K07660 phoP; two-component system, OmpR family, response regulator PhoP
D JG479_15410 envZ; (GenBank) two-component system sensor histidine kinase EnvZ K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D JG479_15415 ompR; (GenBank) two-component system response regulator OmpR K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D JG479_14405 HAMP domain-containing protein K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D JG479_14400 response regulator K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D JG479_11870 HAMP domain-containing protein K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3]
D JG479_11865 response regulator K07664 baeR; two-component system, OmpR family, response regulator BaeR
D JG479_15490 heavy metal sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D JG479_15485 heavy metal response regulator transcription factor K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D JG479_08875 DUF4118 domain-containing protein K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D JG479_08870 response regulator transcription factor K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D JG479_12240 response regulator K07647 torS; two-component system, OmpR family, sensor histidine kinase TorS [EC:2.7.13.3]
D JG479_13435 arcB; (GenBank) aerobic respiration two-component sensor histidine kinase ArcB K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D JG479_13430 arcA; (GenBank) two-component system response regulator ArcA K07773 arcA; two-component system, OmpR family, aerobic respiration control protein ArcA
D JG479_04840 ATP-binding protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D JG479_19825 sensor histidine kinase N-terminal domain-containing protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D JG479_03770 pdsR; (GenBank) proteobacterial dedicated sortase system response regulator K02483 K02483; two-component system, OmpR family, response regulator
D JG479_04835 response regulator K02483 K02483; two-component system, OmpR family, response regulator
D JG479_19830 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator
D JG479_19915 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator
D JG479_04235 barA; (GenBank) two-component sensor histidine kinase BarA K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D JG479_03280 sensor histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D JG479_03285 response regulator transcription factor K07693 desR; two-component system, NarL family, response regulator DesR
D JG479_11585 histidine kinase K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3]
D JG479_11580 response regulator transcription factor K08083 algR; two-component system, LytTR family, response regulator AlgR
D JG479_07300 histidine kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D JG479_00390 LytTR family transcriptional regulator DNA-binding domain-containing protein K02477 K02477; two-component system, LytTR family, response regulator
D JG479_07305 response regulator transcription factor K02477 K02477; two-component system, LytTR family, response regulator
D JG479_00785 glnL; (GenBank) nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D JG479_00780 ntrC; (GenBank) nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D JG479_03730 HAMP domain-containing histidine kinase K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
D JG479_03740 sigma 54-interacting transcriptional regulator K07715 glrR; two-component system, NtrC family, response regulator GlrR
D JG479_17915 two-component sensor histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D JG479_17910 sigma-54-dependent Fis family transcriptional regulator K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
D JG479_19725 HAMP domain-containing histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D JG479_04635 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D JG479_15730 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D JG479_04625 cheY; (GenBank) chemotaxis response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D JG479_07830 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D JG479_07870 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D JG479_11625 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D JG479_15735 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D JG479_17925 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D JG479_19205 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D JG479_04640 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D JG479_15705 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D JG479_04415 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D JG479_08170 response regulator K11443 divK; two-component system, cell cycle response regulator DivK
D JG479_11150 Hpt domain-containing protein K10911 luxU; two-component system, phosphorelay protein LuxU
D JG479_04520 PAS domain-containing protein K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3]
D JG479_04525 sigma-54-dependent Fis family transcriptional regulator K10943 flrC; two-component system, response regulator FlrC
D JG479_18190 HAMP domain-containing histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D JG479_18185 response regulator K15012 regA; two-component system, response regulator RegA
D JG479_00290 CHASE domain-containing protein K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3]
D JG479_18405 response regulator K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3]
D JG479_11440 SpoIIE family protein phosphatase K20977 hsbR; two-component system, HptB-dependent secretion and biofilm response regulator
D JG479_03640 response regulator K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
D JG479_10125 PAS domain S-box protein K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
C 02035 Bacterial motility proteins [BR:pslc02035]
D JG479_04635 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D JG479_15730 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D JG479_04660 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D JG479_04665 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D JG479_15725 purine-binding chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D JG479_02805 chemotaxis protein CheX K03409 cheX; chemotaxis protein CheX
D JG479_15710 cheD; (GenBank) chemoreceptor glutamine deamidase CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D JG479_04420 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D JG479_15715 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D JG479_04640 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D JG479_15705 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D JG479_04625 cheY; (GenBank) chemotaxis response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D JG479_07830 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D JG479_07870 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D JG479_11625 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D JG479_15735 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D JG479_17925 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D JG479_19205 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D JG479_04630 protein phosphatase CheZ K03414 cheZ; chemotaxis protein CheZ
D JG479_04415 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D JG479_01720 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JG479_02580 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JG479_03260 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JG479_03675 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JG479_04805 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JG479_04945 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JG479_06220 PAS domain S-box protein K03406 mcp; methyl-accepting chemotaxis protein
D JG479_11935 PAS domain-containing methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JG479_12210 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D JG479_12285 cache domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D JG479_15390 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JG479_15720 PAS domain S-box protein K03406 mcp; methyl-accepting chemotaxis protein
D JG479_16970 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JG479_18335 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JG479_19105 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JG479_19595 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JG479_11515 PAS domain S-box protein K03776 aer; aerotaxis receptor
D JG479_04545 fliH; (GenBank) flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D JG479_04550 fliI; (GenBank) flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D JG479_04555 fliJ; (GenBank) flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ
D JG479_04580 fliO; (GenBank) flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D JG479_04585 fliP; (GenBank) flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D JG479_04590 fliQ; (GenBank) flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D JG479_04595 fliR; (GenBank) flagellar type III secretion system protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D JG479_04605 flhA; (GenBank) flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D JG479_04600 flhB; (GenBank) flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D JG479_04540 fliG; (GenBank) flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D JG479_04570 fliM; (GenBank) flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D JG479_04575 fliN; (GenBank) flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D JG479_04535 fliF; (GenBank) flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D JG479_04460 flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D JG479_04410 flgA; (GenBank) flagellar basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D JG479_04455 flgH; (GenBank) flagellar basal body L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D JG479_04565 fliL; (GenBank) flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D JG479_12630 fliL; (GenBank) flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D JG479_04530 fliE; (GenBank) flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D JG479_04560 flagellar hook-length control protein FliK K02414 fliK; flagellar hook-length control protein FliK
D JG479_04425 flgB; (GenBank) flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D JG479_04430 flgC; (GenBank) flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D JG479_04435 flgD; (GenBank) flagellar hook assembly protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D JG479_04445 flagellar basal body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D JG479_04450 flgG; (GenBank) flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D JG479_04465 flgJ; (GenBank) flagellar assembly peptidoglycan hydrolase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ
D JG479_04440 flgE; (GenBank) flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D JG479_04470 flgK; (GenBank) flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D JG479_04475 flgL; (GenBank) flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D JG479_04400 flagellar protein FlgN K02399 flgN; flagellar biosynthesis protein FlgN
D JG479_03700 hypothetical protein K24344 flgO; flagellar H-ring protein FlgO
D JG479_04360 LPP20 family lipoprotein K09860 flgP; outer membrane protein FlgP
D JG479_14875 sel1 repeat family protein K21217 motX; sodium-type polar flagellar protein MotX
D JG479_11415 OmpA family protein K21218 motY; sodium-type flagellar protein MotY
D JG479_04480 flagellin K02406 fliC; flagellin
D JG479_04485 flagellin K02406 fliC; flagellin
D JG479_04495 fliD; (GenBank) flagellar filament capping protein FliD K02407 fliD; flagellar hook-associated protein 2
D JG479_04505 fliS; (GenBank) flagellar export chaperone FliS K02422 fliS; flagellar secretion chaperone FliS
D JG479_04620 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
D JG479_04645 flagellar motor protein K02556 motA; chemotaxis protein MotA
D JG479_12795 pomA; (GenBank) flagellar motor protein PomA K02556 motA; chemotaxis protein MotA
D JG479_04650 OmpA family protein K02557 motB; chemotaxis protein MotB
D JG479_12790 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D JG479_04510 sigma-54-dependent Fis family transcriptional regulator K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D JG479_04520 PAS domain-containing protein K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3]
D JG479_04525 sigma-54-dependent Fis family transcriptional regulator K10943 flrC; two-component system, response regulator FlrC
D JG479_04405 flgM; (GenBank) flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D JG479_04490 flagellar protein FlaG K06603 flaG; flagellar protein FlaG
D JG479_04610 flhF; (GenBank) flagellar biosynthesis protein FlhF K02404 flhF; flagellar biosynthesis protein FlhF
D JG479_04615 MinD/ParA family protein K04562 flhG; flagellar biosynthesis protein FlhG
D JG479_13925 type IV pilus twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D JG479_13920 PilT/PilU family type 4a pilus ATPase K02670 pilU; twitching motility protein PilU
D JG479_14360 pilin K02650 pilA; type IV pilus assembly protein PilA
D JG479_16220 pilin K02650 pilA; type IV pilus assembly protein PilA
D JG479_14385 pilB; (GenBank) type IV-A pilus assembly ATPase PilB K02652 pilB; type IV pilus assembly protein PilB
D JG479_14370 type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC
D JG479_14375 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D JG479_19435 pilW; (GenBank) type IV pilus biogenesis/stability protein PilW K02656 pilF; type IV pilus assembly protein PilF
D JG479_01800 type IV pilus secretin PilQ family protein K02666 pilQ; type IV pilus assembly protein PilQ
D JG479_01795 pilus assembly protein PilP K02665 pilP; type IV pilus assembly protein PilP
D JG479_01790 type 4a pilus biogenesis protein PilO K02664 pilO; type IV pilus assembly protein PilO
D JG479_01785 PilN domain-containing protein K02663 pilN; type IV pilus assembly protein PilN
D JG479_01780 pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
D JG479_06490 PilZ domain-containing protein K02676 pilZ; type IV pilus assembly protein PilZ
D JG479_09055 prepilin-type N-terminal cleavage/methylation domain-containing protein K02671 pilV; type IV pilus assembly protein PilV
D JG479_11575 pilV; (GenBank) type IV pilus modification protein PilV K02671 pilV; type IV pilus assembly protein PilV
D JG479_11570 PilW family protein K02672 pilW; type IV pilus assembly protein PilW
D JG479_11565 pilus assembly protein PilX K02673 pilX; type IV pilus assembly protein PilX
D JG479_09470 VWA domain-containing protein K02674 pilY1; type IV pilus assembly protein PilY1
D JG479_11560 pilin biogenesis protein K02674 pilY1; type IV pilus assembly protein PilY1
D JG479_09065 type IV pilin protein K02655 pilE; type IV pilus assembly protein PilE
D JG479_11555 prepilin-type N-terminal cleavage/methylation domain-containing protein K02655 pilE; type IV pilus assembly protein PilE
D JG479_07895 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:pslc04812]
D JG479_02120 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D JG479_03175 ftsZ; (GenBank) cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D JG479_19290 cell division FtsZ family protein K03531 ftsZ; cell division protein FtsZ
D JG479_03170 ftsA; (GenBank) cell division protein FtsA K03590 ftsA; cell division protein FtsA
D JG479_17030 minC; (GenBank) septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D JG479_17035 minD; (GenBank) septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D JG479_17040 minE; (GenBank) cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D JG479_04655 ParA family protein K03496 parA; chromosome partitioning protein
D JG479_16515 ParA family protein K03496 parA; chromosome partitioning protein
D JG479_16745 AAA family ATPase K03496 parA; chromosome partitioning protein
D JG479_16510 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D JG479_16740 transcriptional regulator K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:pslc04147]
D JG479_09895 htpG; (GenBank) molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D JG479_04260 eno; (GenBank) phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D JG479_05935 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D JG479_07080 gap; (GenBank) type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D JG479_12975 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D JG479_07310 pyk; (GenBank) pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D JG479_12165 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D JG479_17990 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D JG479_00630 dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D JG479_04770 peroxiredoxin C K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D JG479_00995 groL; (GenBank) chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D JG479_17945 dnaK; (GenBank) molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D JG479_10185 pgi; (GenBank) glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D JG479_03680 DPP IV N-terminal domain-containing protein K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D JG479_08975 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
D JG479_03870 guaB; (GenBank) IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D JG479_00625 tuf; (GenBank) elongation factor Tu K02358 tuf; elongation factor Tu
D JG479_01270 tuf; (GenBank) elongation factor Tu K02358 tuf; elongation factor Tu
D JG479_00575 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D JG479_17060 fadD; (GenBank) long-chain-fatty-acid--CoA ligase FadD K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D JG479_07610 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JG479_09890 adk; (GenBank) adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D JG479_09925 apt; (GenBank) adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D JG479_03985 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D JG479_11730 fahA; (GenBank) fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
D JG479_10425 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D JG479_14060 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D JG479_01070 galK; (GenBank) galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D JG479_17435 glgB; (GenBank) 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D JG479_01055 glpK; (GenBank) glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30]
D JG479_00795 glnA; (GenBank) glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JG479_00455 hemB; (GenBank) porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D JG479_11725 hppD; (GenBank) 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D JG479_05175 4a-hydroxytetrahydrobiopterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D JG479_16330 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D JG479_16335 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D JG479_17070 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D JG479_12525 serA; (GenBank) phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D JG479_14525 purH; (GenBank) bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D JG479_04340 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JG479_14325 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JG479_08190 FAD-binding protein K03522 fixB; electron transfer flavoprotein alpha subunit
D JG479_10180 zwf; (GenBank) glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D JG479_04930 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D JG479_19970 lipocalin family protein K03098 APOD; apolipoprotein D and lipocalin family protein
C 02048 Prokaryotic defense system [BR:pslc02048]
D JG479_01935 type I restriction endonuclease subunit R K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D JG479_15570 DEAD/DEAH box helicase family protein K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D JG479_01970 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D JG479_15575 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D JG479_01975 type I restriction-modification system subunit M K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D JG479_15580 N-6 DNA methylase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D JG479_01820 Dam family site-specific DNA-(adenine-N6)-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D JG479_19650 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D JG479_09570 type II toxin-antitoxin system YhaV family toxin K19155 yhaV; toxin YhaV [EC:3.1.-.-]
D JG479_05150 pspC; (GenBank) envelope stress response membrane protein PspC K03973 pspC; phage shock protein C
D JG479_05145 pspB; (GenBank) envelope stress response membrane protein PspB K03970 pspB; phage shock protein B
D JG479_03175 ftsZ; (GenBank) cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D JG479_19290 cell division FtsZ family protein K03531 ftsZ; cell division protein FtsZ
D JG479_02120 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D JG479_13835 parC; (GenBank) DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D JG479_13845 parE; (GenBank) DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D JG479_03805 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D JG479_04175 succinate dehydrogenase assembly factor 2 K09159 cptB; antitoxin CptB
D JG479_02205 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D JG479_10190 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules [BR:pslc04090]
D JG479_03680 DPP IV N-terminal domain-containing protein K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
C 01504 Antimicrobial resistance genes [BR:pslc01504]
D JG479_17975 sodium:proton antiporter K18218 tet35; tetracycline resistance efflux pump
D JG479_03375 cytochrome C K18235 vgb; virginiamycin B lyase [EC:4.2.99.-]
D JG479_10035 chloramphenicol acetyltransferase K19271 catA; chloramphenicol O-acetyltransferase type A [EC:2.3.1.28]
D JG479_16075 M56 family metallopeptidase K02172 blaR1; bla regulator protein blaR1
D JG479_16070 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D JG479_15490 heavy metal sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D JG479_15485 heavy metal response regulator transcription factor K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D JG479_09260 GHKL domain-containing protein K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D JG479_09255 response regulator transcription factor K07660 phoP; two-component system, OmpR family, response regulator PhoP
D JG479_04065 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D JG479_18110 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D JG479_04060 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D JG479_18105 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D JG479_13165 TolC family protein K18139 oprM; outer membrane protein, multidrug efflux system
D JG479_13365 TolC family protein K18139 oprM; outer membrane protein, multidrug efflux system
D JG479_18100 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D JG479_17845 efflux RND transporter periplasmic adaptor subunit K18298 mexE; membrane fusion protein, multidrug efflux system
D JG479_17840 multidrug efflux RND transporter permease subunit K18299 mexF; multidrug efflux pump
D JG479_17835 TolC family protein K18300 oprN; outer membrane protein, multidrug efflux system
D JG479_13870 tolC; (GenBank) outer membrane channel protein TolC K12340 tolC; outer membrane protein
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:pslc00537]
D JG479_16330 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D JG479_16335 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D JG479_17070 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D JG479_00630 dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:pslc03100]
D JG479_00180 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D JG479_01455 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D JG479_10520 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D JG479_14840 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D JG479_04325 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D JG479_05055 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D JG479_13240 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D JG479_13610 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D JG479_13615 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D JG479_13620 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D JG479_13625 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D JG479_10330 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D JG479_10335 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D JG479_10340 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D JG479_10345 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D JG479_05605 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D JG479_05610 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D JG479_05615 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D JG479_05620 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D JG479_05625 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D JG479_05630 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D JG479_05635 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D JG479_05845 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D JG479_05870 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D JG479_10780 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D JG479_10795 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D JG479_10805 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D JG479_10815 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D JG479_10485 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D JG479_10490 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D JG479_10495 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D JG479_10500 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D JG479_10505 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D JG479_10510 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D JG479_10515 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D JG479_00615 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D JG479_02785 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D JG479_02790 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D JG479_02795 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D JG479_05840 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D JG479_05855 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D JG479_05865 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D JG479_02270 tRNA-His K14226 tRNA-His; tRNA His
D JG479_05060 tRNA-His K14226 tRNA-His; tRNA His
D JG479_00175 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D JG479_01450 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D JG479_03490 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JG479_04940 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JG479_05850 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JG479_05860 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JG479_05875 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JG479_10775 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JG479_10790 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JG479_10800 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JG479_10810 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JG479_06100 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D JG479_06105 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D JG479_06110 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D JG479_06115 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D JG479_06120 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D JG479_06125 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D JG479_06130 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D JG479_06135 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D JG479_10770 tRNA-Met K14230 tRNA-Met; tRNA Met
D JG479_10785 tRNA-Met K14230 tRNA-Met; tRNA Met
D JG479_11120 tRNA-Met K14230 tRNA-Met; tRNA Met
D JG479_14590 tRNA-Ile K14230 tRNA-Met; tRNA Met
D JG479_15075 tRNA-Met K14230 tRNA-Met; tRNA Met
D JG479_15080 tRNA-Met K14230 tRNA-Met; tRNA Met
D JG479_15085 tRNA-Met K14230 tRNA-Met; tRNA Met
D JG479_13375 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D JG479_13385 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D JG479_13395 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D JG479_05050 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D JG479_05065 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D JG479_05070 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D JG479_06035 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D JG479_00315 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D JG479_00320 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D JG479_06145 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D JG479_07350 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D JG479_08535 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D JG479_08540 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D JG479_13630 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D JG479_00605 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D JG479_00620 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D JG479_13370 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D JG479_13380 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D JG479_13390 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D JG479_01210 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D JG479_03880 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D JG479_00610 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D JG479_10110 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D JG479_10115 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D JG479_08820 tRNA-Val K14237 tRNA-Val; tRNA Val
D JG479_08825 tRNA-Val K14237 tRNA-Val; tRNA Val
D JG479_10525 tRNA-Val K14237 tRNA-Val; tRNA Val
D JG479_10530 tRNA-Val K14237 tRNA-Val; tRNA Val
D JG479_10535 tRNA-Val K14237 tRNA-Val; tRNA Val
D JG479_10540 tRNA-Val K14237 tRNA-Val; tRNA Val
D JG479_10545 tRNA-Val K14237 tRNA-Val; tRNA Val
D JG479_10550 tRNA-Val K14237 tRNA-Val; tRNA Val
D JG479_10555 tRNA-Val K14237 tRNA-Val; tRNA Val
D JG479_00170 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D JG479_01295 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D JG479_01445 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D JG479_05890 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D JG479_12765 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D JG479_15145 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D JG479_15890 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D JG479_16440 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D JG479_19260 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D JG479_00185 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D JG479_01300 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D JG479_01460 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D JG479_05895 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D JG479_12760 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D JG479_15140 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D JG479_15885 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D JG479_16435 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D JG479_19255 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D JG479_00190 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D JG479_01305 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D JG479_01465 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D JG479_05900 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D JG479_12750 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D JG479_12755 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D JG479_15135 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D JG479_15880 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D JG479_16430 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D JG479_19250 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D JG479_03055 rnpB; (GenBank) RNase P RNA component class A K01978 rnpB; RNase P catalytic RNA component
D JG479_13350 ssrS; (GenBank) 6S RNA K28358 ssrS; RNA polymerase binding 6S RNA
D JG479_05350 ffs; (GenBank) signal recognition particle sRNA small type K01983 ffs; signal recognition particle 4.5S RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D JG479_17600 dkgB; (GenBank) 2,5-didehydrogluconate reductase DkgB K06222 dkgB; 2,5-diketo-D-gluconate reductase B [EC:1.1.1.346]
D JG479_08680 PQQ-dependent sugar dehydrogenase K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-]
D JG479_09360 PQQ-dependent sugar dehydrogenase K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-]
D JG479_17895 coniferyl aldehyde dehydrogenase K00154 E1.2.1.68; coniferyl-aldehyde dehydrogenase [EC:1.2.1.68]
D JG479_19115 ArsJ-associated glyceraldehyde-3-phosphate dehydrogenase K25224 gapdh; glyceraldehyde-3-phosphate dehydrogenase (arsenate-transferring) [EC:1.2.1.107]
D JG479_07330 FAD-dependent oxidoreductase K00219 fadH; 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34]
D JG479_19585 NADP-dependent oxidoreductase K23256 curA; NADPH-dependent curcumin reductase [EC:1.3.1.-]
D JG479_12000 (2Fe-2S)-binding protein K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16]
D JG479_17870 (2Fe-2S)-binding protein K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16]
D JG479_11995 xanthine dehydrogenase family protein molybdopterin-binding subunit K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16]
D JG479_17865 xanthine dehydrogenase family protein molybdopterin-binding subunit K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16]
D JG479_08200 electron transfer flavoprotein-ubiquinone oxidoreductase K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1]
D JG479_01105 zinc-dependent alcohol dehydrogenase family protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D JG479_06800 zinc-binding dehydrogenase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D JG479_19525 zinc-binding dehydrogenase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D JG479_18415 ahpF; (GenBank) alkyl hydroperoxide reductase subunit F K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-]
D JG479_04055 msrA; (GenBank) peptide-methionine (S)-S-oxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D JG479_08020 msrA; (GenBank) peptide-methionine (S)-S-oxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D JG479_09650 peptide-methionine (S)-S-oxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D JG479_07555 msrA; (GenBank) peptide-methionine (S)-S-oxide reductase MsrA K12267 msrAB; peptide methionine sulfoxide reductase msrA/msrB [EC:1.8.4.11 1.8.4.12]
D JG479_10565 msrB; (GenBank) peptide-methionine (R)-S-oxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D JG479_03440 glutathione S-transferase family protein K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D JG479_11835 yghU; (GenBank) glutathione-dependent disulfide-bond oxidoreductase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D JG479_03085 glutathione S-transferase family protein K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7]
D JG479_10265 bcp; (GenBank) thioredoxin-dependent thiol peroxidase K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D JG479_09885 tpx; (GenBank) thiol peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D JG479_18420 ahpC; (GenBank) peroxiredoxin K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26]
D JG479_11905 OsmC family protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D JG479_19125 organic hydroperoxide resistance protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D JG479_14295 Dyp-type peroxidase K07223 yfeX; porphyrinogen peroxidase [EC:1.11.1.-]
D JG479_03080 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D JG479_02685 Fe2+-dependent dioxygenase K07336 K07336; PKHD-type hydroxylase [EC:1.14.11.-]
D JG479_15840 hmpA; (GenBank) NO-inducible flavohemoprotein K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17]
D JG479_19700 ferredoxin--NADP reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D JG479_10215 arsC; (GenBank) arsenate reductase (glutaredoxin) K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D JG479_12400 protein-L-isoaspartate(D-aspartate) O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D JG479_17260 class I SAM-dependent methyltransferase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D JG479_16425 sugar O-acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79]
D JG479_10850 lnt; (GenBank) apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D JG479_10655 GNAT family N-acetyltransferase K03829 yedL; putative acetyltransferase [EC:2.3.1.-]
D JG479_12480 GNAT family N-acetyltransferase K03829 yedL; putative acetyltransferase [EC:2.3.1.-]
D JG479_08740 aat; (GenBank) leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D JG479_07815 DUF3488 domain-containing protein K22452 tgpA; protein-glutamine gamma-glutamyltransferase [EC:2.3.2.13]
D JG479_08745 arginyltransferase K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29]
D JG479_06850 DTW domain-containing protein K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25]
D JG479_14320 DTW domain-containing protein K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25]
D JG479_04285 lgt; (GenBank) prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D JG479_12105 FAD:protein FMN transferase K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D JG479_16765 kinase/pyrophosphorylase K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D JG479_13885 glnE; (GenBank) bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D JG479_00870 YdiU family protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108]
D JG479_07750 serine/threonine protein kinase K08282 E2.7.11.1; non-specific serine/threonine protein kinase [EC:2.7.11.1]
D JG479_06385 aceK; (GenBank) bifunctional isocitrate dehydrogenase kinase/phosphatase K00906 aceK; isocitrate dehydrogenase kinase/phosphatase [EC:2.7.11.5 3.1.3.-]
D JG479_06795 aceK; (GenBank) bifunctional isocitrate dehydrogenase kinase/phosphatase K00906 aceK; isocitrate dehydrogenase kinase/phosphatase [EC:2.7.11.5 3.1.3.-]
D JG479_00900 acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D JG479_02730 acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D JG479_03660 acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D JG479_06615 capsule biosynthesis protein CapC K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D JG479_06725 PHP domain-containing protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D JG479_11260 sixA; (GenBank) phosphohistidine phosphatase SixA K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D JG479_08175 response regulator K07814 K07814; cyclic di-GMP phosphodiesterase [EC:3.1.4.-]
D JG479_10130 two-component system response regulator K07814 K07814; cyclic di-GMP phosphodiesterase [EC:3.1.4.-]
D JG479_04100 HD-GYP domain-containing protein K25135 K25135; cyclic di-GMP phosphodiesterase [EC:3.1.4.-]
D JG479_15825 endonuclease K01150 endA; deoxyribonuclease I [EC:3.1.21.1]
D JG479_00465 YchF/TatD family DNA exonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D JG479_03935 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D JG479_06495 YchF/TatD family DNA exonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D JG479_08295 alpha/beta fold hydrolase K01175 ybfF; esterase [EC:3.1.-.-]
D JG479_11705 bcsZ; (GenBank) cellulase K20542 bcsZ; endoglucanase [EC:3.2.1.4]
D JG479_07030 glycoside hydrolase family 13 protein K21575 susA; neopullulanase [EC:3.2.1.135]
D JG479_08980 hypothetical protein K15531 rexA; oligosaccharide reducing-end xylanase [EC:3.2.1.156]
D JG479_14195 hypothetical protein K25649 mgh; mannosylglycerate hydrolase [EC:3.2.1.170]
D JG479_00115 def; (GenBank) peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D JG479_02150 carbon-nitrogen hydrolase family protein K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128]
D JG479_12255 CYTH domain-containing protein K18446 ygiF; triphosphatase [EC:3.6.1.25]
D JG479_06430 maf; (GenBank) septum formation inhibitor Maf K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-]
D JG479_07825 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D JG479_11300 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D JG479_00980 NAD(P)H-hydrate dehydratase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D JG479_10455 heparinase II/III family protein K20525 alg17C; oligo-alginate lyase [EC:4.2.2.26]
D JG479_12560 mpl; (GenBank) UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45]
D JG479_11770 DNA ligase K26441 lig; DNA ligase [EC:6.5.1.1]
D JG479_10375 rsxD; (GenBank) electron transport complex subunit RsxD K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2]
D JG479_10370 rsxC; (GenBank) electron transport complex subunit RsxC K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2]
D JG479_10365 rsxB; (GenBank) electron transport complex subunit RsxB K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D JG479_12135 Na(+)-translocating NADH-quinone reductase subunit A K00346 nqrA; Na+-transporting NADH:ubiquinone oxidoreductase subunit A [EC:7.2.1.1]
D JG479_12130 NADH:ubiquinone reductase (Na(+)-transporting) subunit B K00347 nqrB; Na+-transporting NADH:ubiquinone oxidoreductase subunit B [EC:7.2.1.1]
D JG479_12125 Na(+)-translocating NADH-quinone reductase subunit C K00348 nqrC; Na+-transporting NADH:ubiquinone oxidoreductase subunit C [EC:7.2.1.1]
D JG479_12120 NADH:ubiquinone reductase (Na(+)-transporting) subunit D K00349 nqrD; Na+-transporting NADH:ubiquinone oxidoreductase subunit D [EC:7.2.1.1]
D JG479_12115 nqrE; (GenBank) NADH:ubiquinone reductase (Na(+)-transporting) subunit E K00350 nqrE; Na+-transporting NADH:ubiquinone oxidoreductase subunit E [EC:7.2.1.1]
D JG479_12110 nqrF; (GenBank) NADH:ubiquinone reductase (Na(+)-transporting) subunit F K00351 nqrF; Na+-transporting NADH:ubiquinone oxidoreductase subunit F [EC:7.2.1.1]
D JG479_06260 cadA; (GenBank) cadmium-translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
C 99981 Carbohydrate metabolism
D JG479_12915 sfsA; (GenBank) DNA/RNA nuclease SfsA K06206 sfsA; sugar fermentation stimulation protein A
C 99982 Energy metabolism
D JG479_17540 ferredoxin family protein K05524 fdxA; ferredoxin
D JG479_07410 2Fe-2S ferredoxin-like protein K11107 yfaE; ferredoxin
D JG479_10380 rsxG; (GenBank) electron transport complex subunit RsxG K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G
D JG479_10385 electron transport complex subunit E K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E
D JG479_10360 rsxA; (GenBank) electron transport complex subunit RsxA K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A
D JG479_16530 mioC; (GenBank) FMN-binding protein MioC K06205 mioC; MioC protein
D JG479_13665 fldB; (GenBank) flavodoxin FldB K03840 fldB; flavodoxin II
D JG479_02210 iscU; (GenBank) Fe-S cluster assembly scaffold IscU K04488 iscU; nitrogen fixation protein NifU and related proteins
D JG479_17645 hypothetical protein K15536 cybC; soluble cytochrome b562
D JG479_08310 fldA; (GenBank) flavodoxin FldA K03839 fldA; flavodoxin I
D JG479_08195 electron transfer flavoprotein subunit beta/FixA family protein K03521 fixA; electron transfer flavoprotein beta subunit
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D JG479_10665 cysZ; (GenBank) sulfate transporter CysZ K06203 cysZ; CysZ protein
D JG479_18210 VOC family protein K08234 yaeR; glyoxylase I family protein
D JG479_13930 YggS family pyridoxal phosphate-dependent enzyme K06997 yggS; PLP dependent protein
D JG479_12060 GNAT family N-acetyltransferase K22479 argA; N-acetyltransferase
C 99986 Glycan metabolism
D JG479_07465 LapA family protein K08992 lapA; lipopolysaccharide assembly protein A
D JG479_07470 lapB; (GenBank) lipopolysaccharide assembly protein LapB K19804 lapB; lipopolysaccharide assembly protein B
D JG479_11700 cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB K20541 bcsB; cellulose synthase operon protein B
C 99987 Cofactor metabolism
D JG479_15985 heme biosynthesis HemY N-terminal domain-containing protein K02498 hemY; HemY protein
D JG479_00490 ubiB; (GenBank) ubiquinone biosynthesis regulatory protein kinase UbiB K03688 ubiB; ubiquinone biosynthesis protein
D JG479_00495 SCP2 sterol-binding domain-containing protein K03690 ubiJ; ubiquinone biosynthesis accessory factor UbiJ
D JG479_01565 accessory factor UbiK family protein K09806 ubiK; ubiquinone biosynthesis accessory factor UbiK
D JG479_11195 AbgT family transporter K12942 abgT; aminobenzoyl-glutamate transport protein
C 99988 Secondary metabolism
D JG479_15860 NAD(P)H-dependent oxidoreductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone)
C 99999 Others
D JG479_07335 DoxX family protein K15977 K15977; putative oxidoreductase
D JG479_08955 DoxX family protein K15977 K15977; putative oxidoreductase
D JG479_13075 DoxX family protein K15977 K15977; putative oxidoreductase
D JG479_16005 dienelactone hydrolase family protein K06999 K06999; phospholipase/carboxylesterase
D JG479_13980 bifunctional acetate--CoA ligase family protein/GNAT family N-acetyltransferase K09181 yfiQ; acetyltransferase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D JG479_08765 cspD; (GenBank) cold shock domain-containing protein CspD K03704 cspA; cold shock protein
D JG479_09990 cold-shock protein K03704 cspA; cold shock protein
D JG479_16350 cold-shock protein K03704 cspA; cold shock protein
D JG479_16355 cold-shock protein K03704 cspA; cold shock protein
D JG479_16360 cold-shock protein K03704 cspA; cold shock protein
D JG479_19805 cold-shock protein K03704 cspA; cold shock protein
D JG479_00675 rsd; (GenBank) sigma D regulator K07740 rsd; regulator of sigma D
D JG479_12225 P-II family nitrogen regulator K04752 glnK; nitrogen regulatory protein P-II 2
D JG479_15655 RNA-binding transcriptional accessory protein K06959 tex; protein Tex
C 99974 Translation
D JG479_02340 MBL fold metallo-hydrolase K07576 K07576; metallo-beta-lactamase family protein
C 99975 Protein processing
D JG479_02735 META domain-containing protein K03668 hslJ; heat shock protein HslJ
D JG479_08760 clpS; (GenBank) ATP-dependent Clp protease adapter ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D JG479_05075 tig; (GenBank) trigger factor K03545 tig; trigger factor
D JG479_04780 smpB; (GenBank) SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein
D JG479_15065 YifB family Mg chelatase-like AAA ATPase K07391 comM; magnesium chelatase family protein
D JG479_12615 2OG-Fe(II) oxygenase K07394 K07394; SM-20-related protein
D JG479_16960 DsbA family protein K07396 K07396; putative protein-disulfide isomerase
D JG479_18735 DsbA family protein K07396 K07396; putative protein-disulfide isomerase
D JG479_01140 OsmC family protein K07397 yhfA; putative redox protein
D JG479_15685 nfuA; (GenBank) Fe-S biogenesis protein NfuA K07400 nfuA; Fe/S biogenesis protein NfuA
D JG479_17880 XdhC family protein K07402 xdhC; xanthine dehydrogenase accessory factor
D JG479_19005 xdhC; (GenBank) xanthine dehydrogenase accessory protein XdhC K07402 xdhC; xanthine dehydrogenase accessory factor
C 99976 Replication and repair
D JG479_17360 MGMT family protein K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein
D JG479_17205 xni; (GenBank) flap endonuclease Xni K01146 xni; protein Xni
D JG479_14155 radC; (GenBank) DNA repair protein RadC K03630 radC; DNA repair protein RadC
D JG479_16730 rmuC; (GenBank) DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC
D JG479_03040 YraN family protein K07460 yraN; putative endonuclease
D JG479_04800 GIY-YIG nuclease family protein K07461 K07461; putative endonuclease
D JG479_00125 dprA; (GenBank) DNA-protecting protein DprA K04096 smf; DNA processing protein
D JG479_08705 replication-associated recombination protein A K07478 ycaJ; putative ATPase
D JG479_00135 topoisomerase DNA-binding C4 zinc finger domain-containing protein K07479 yrdD; putative DNA topoisomerase
D JG479_15435 tnpB; (GenBank) IS66 family insertion sequence element accessory protein TnpB K07484 K07484; transposase
D JG479_15440 IS66 family transposase K07484 K07484; transposase
D JG479_15500 tnpB; (GenBank) IS66 family insertion sequence element accessory protein TnpB K07484 K07484; transposase
D JG479_07665 IS110 family transposase K07486 K07486; transposase
D JG479_00040 transposase K07491 rayT; REP-associated tyrosine transposase
D JG479_15445 IS3 family transposase K07497 K07497; putative transposase
D JG479_15505 IS66 family insertion sequence hypothetical protein K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D JG479_02825 PspA/IM30 family protein K03969 pspA; phage shock protein A
D JG479_05140 pspA; (GenBank) phage shock protein PspA K03969 pspA; phage shock protein A
D JG479_15310 rhodanese-like domain-containing protein K03972 pspE; phage shock protein E
D JG479_09915 YbaB/EbfC family nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC
D JG479_19485 DASH family cryptochrome K25656 cry; cryptochrome
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D JG479_09035 MFS transporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family
D JG479_09305 MFS transporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family
D JG479_09440 MFS transporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family
D JG479_07510 BCCT family transporter K03451 TC.BCT; betaine/carnitine transporter, BCCT family
D JG479_16375 BCCT family transporter K03451 TC.BCT; betaine/carnitine transporter, BCCT family
D JG479_11715 peptide MFS transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D JG479_14675 inorganic phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family
D JG479_00925 SLC5 family protein K03307 TC.SSS; solute:Na+ symporter, SSS family
D JG479_04740 putP; (GenBank) sodium/proline symporter PutP K03307 TC.SSS; solute:Na+ symporter, SSS family
D JG479_04865 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D JG479_09240 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D JG479_09610 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D JG479_05945 alanine:cation symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D JG479_16810 alanine:cation symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D JG479_19940 bile acid:sodium symporter family protein K03453 TC.BASS; bile acid:Na+ symporter, BASS family
D JG479_19795 NupC/NupG family nucleoside CNT transporter K03317 TC.CNT; concentrative nucleoside transporter, CNT family
D JG479_18925 DASS family sodium-coupled anion symporter K03319 TC.DASS; divalent anion:Na+ symporter, DASS family
C 99978 Cell growth
D JG479_06680 septation protein IspZ K06190 ispZ; intracellular septation protein
D JG479_04855 sporulation protein K06377 spo0M; sporulation-control protein
D JG479_09870 SpoVR family protein K06415 spoVR; stage V sporulation protein R
D JG479_14450 peptidoglycan DD-metalloendopeptidase family protein K22719 envC; murein hydrolase activator
C 99993 Cell motility
D JG479_06870 lpoB; (GenBank) penicillin-binding protein activator LpoB K07337 K07337; penicillin-binding protein activator
D JG479_05525 syd; (GenBank) SecY-interacting protein K15723 syd; SecY interacting protein Syd
C 99995 Signaling proteins
D JG479_14345 ampE; (GenBank) beta-lactamase regulator AmpE K03807 ampE; AmpE protein
D JG479_08500 proQ; (GenBank) RNA chaperone ProQ K03607 proQ; ProP effector
D JG479_18485 universal stress protein K06149 uspA; universal stress protein A
D JG479_06240 uspE; (GenBank) universal stress protein UspE K14055 uspE; universal stress protein E
D JG479_00800 typA; (GenBank) translational GTPase TypA K06207 typA; GTP-binding protein
D JG479_17295 cupin domain-containing protein K07167 chrR; putative transcriptional regulator
D JG479_10835 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D JG479_14040 PhoH family protein K07175 phoH2; PhoH-like ATPase
D JG479_09860 PrkA family serine protein kinase K07180 prkA; serine protein kinase
D JG479_07500 cyclic nucleotide-binding/CBS domain-containing protein K07182 K07182; CBS domain-containing protein
D JG479_13000 CBS domain-containing protein K07182 K07182; CBS domain-containing protein
D JG479_12260 TIGR04211 family SH3 domain-containing protein K07184 ygiM; SH3 domain protein
D JG479_03940 smp protein K07186 smp; membrane protein
D JG479_04040 YajQ family cyclic di-GMP-binding protein K09767 yajQ; cyclic-di-GMP-binding protein
C 99992 Structural proteins
D JG479_08710 lolA; (GenBank) outer membrane lipoprotein chaperone LolA K03634 lolA; outer membrane lipoprotein carrier protein
D JG479_10740 lolB; (GenBank) outer membrane lipoprotein LolB K02494 lolB; outer membrane lipoprotein LolB
D JG479_04730 VacJ family lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA
D JG479_06865 glycine zipper 2TM domain-containing protein K06077 slyB; outer membrane lipoprotein SlyB
D JG479_05250 OmpH family outer membrane protein K06142 hlpA; outer membrane protein
D JG479_12390 peptidoglycan DD-metalloendopeptidase family protein K06194 nlpD; lipoprotein NlpD
D JG479_11080 nlpI; (GenBank) lipoprotein NlpI K05803 nlpI; lipoprotein NlpI
D JG479_14080 capsular biosynthesis protein K07265 kpsS; capsular polysaccharide export protein
D JG479_11655 outer membrane beta-barrel protein K07275 ompW; outer membrane protein
D JG479_02280 DUF481 domain-containing protein K07283 ydiY; putative salt-induced outer membrane protein
D JG479_04155 DUF481 domain-containing protein K07283 ydiY; putative salt-induced outer membrane protein
D JG479_12160 YajG family lipoprotein K07286 yajG; uncharacterized lipoprotein
D JG479_15235 AsmA family protein K07289 asmA; AsmA protein
D JG479_09820 efflux RND transporter periplasmic adaptor subunit K02005 ABC.CD.TX; HlyD family secretion protein
D JG479_15265 efflux RND transporter periplasmic adaptor subunit K02005 ABC.CD.TX; HlyD family secretion protein
D JG479_09275 AI-2E family transporter K11744 tqsA; AI-2 transport protein TqsA
D JG479_04705 ccmE; (GenBank) cytochrome c maturation protein CcmE K02197 ccmE; cytochrome c-type biogenesis protein CcmE
D JG479_04720 cytochrome c-type biogenesis protein CcmH K02200 ccmH; cytochrome c-type biogenesis protein CcmH
D JG479_19440 DUF4115 domain-containing protein K15539 rodZ; cytoskeleton protein RodZ
D JG479_10610 DUF1656 domain-containing protein K21695 aaeX; protein AaeX
C 99994 Others
D JG479_14685 phoU; (GenBank) phosphate signaling complex protein PhoU K02039 phoU; phosphate transport system protein
D JG479_18320 (2Fe-2S)-binding protein K02192 bfd; bacterioferritin-associated ferredoxin
D JG479_00445 glucan biosynthesis protein G K03670 mdoG; periplasmic glucans biosynthesis protein
D JG479_18880 glucan biosynthesis protein K03670 mdoG; periplasmic glucans biosynthesis protein
D JG479_01010 divalent-cation tolerance protein CutA K03926 cutA; periplasmic divalent cation tolerance protein
D JG479_02590 apaG; (GenBank) Co2+/Mg2+ efflux protein ApaG K06195 apaG; ApaG protein
D JG479_16010 cyaY; (GenBank) iron donor protein CyaY K06202 cyaY; iron-sulfur cluster assembly protein CyaY
D JG479_15475 copper resistance protein B K07233 pcoB; copper resistance protein B
D JG479_15845 NnrS family protein K07234 K07234; uncharacterized protein involved in response to NO
B
B 09194 Poorly characterized
C 99996 General function prediction only
D JG479_05005 CvpA family protein K03558 cvpA; membrane protein required for colicin V production
D JG479_09320 glucosaminidase domain-containing protein K03796 bax; Bax protein
D JG479_04860 GNAT family N-acetyltransferase K02348 elaA; ElaA protein
D JG479_03390 ChaB family protein K06197 chaB; cation transport regulator
D JG479_14605 BON domain-containing protein K04065 osmY; hyperosmotically inducible periplasmic protein
D JG479_00150 group II truncated hemoglobin K06886 glbN; hemoglobin
D JG479_14085 group 1 truncated hemoglobin K06886 glbN; hemoglobin
D JG479_05340 patatin-like phospholipase family protein K07001 K07001; NTE family protein
D JG479_12185 erpA; (GenBank) iron-sulfur cluster insertion protein ErpA K15724 erpA; iron-sulfur cluster insertion protein
D JG479_17615 metal-dependent hydrolase K07038 K07038; inner membrane protein
D JG479_00820 virulence factor BrkB family protein K07058 K07058; membrane protein
D JG479_03065 YihY/virulence factor BrkB family protein K07058 K07058; membrane protein
D JG479_01005 FxsA family protein K07113 fxsA; UPF0716 protein FxsA
D JG479_08380 SufE family protein K02426 sufE; cysteine desulfuration protein SufE
D JG479_07495 rhodanese-related sulfurtransferase K07146 K07146; UPF0176 protein
D JG479_08585 hflD; (GenBank) high frequency lysogenization protein HflD K07153 hflD; high frequency lysogenization protein
D JG479_03485 VOC family protein K04750 phnB; PhnB protein
D JG479_02015 arsH; (GenBank) arsenical resistance protein ArsH K11811 arsH; arsenical resistance protein ArsH
D JG479_00660 SlyX family protein K03745 slyX; SlyX protein
D JG479_00130 DUF494 domain-containing protein K03747 smg; Smg protein
D JG479_14580 CreA family protein K05805 creA; CreA protein
D JG479_05000 SPOR domain-containing protein K03749 dedD; DedD protein
D JG479_01815 SPOR domain-containing protein K03112 damX; DamX protein
D JG479_15320 PH domain-containing protein K08981 K08981; putative membrane protein
D JG479_16250 PH domain-containing protein K08981 K08981; putative membrane protein
D JG479_09385 DUF2238 domain-containing protein K08984 yjdF; putative membrane protein
D JG479_05160 TIGR01620 family protein K08990 ycjF; putative membrane protein
D JG479_10090 YchJ family protein K09858 K09858; SEC-C motif domain protein
D JG479_14755 META domain-containing protein K09914 K09914; putative lipoprotein
D JG479_07150 alkylphosphonate utilization protein K06193 phnA; protein PhnA
D JG479_14750 PhnA domain-containing protein K06193 phnA; protein PhnA
C 99997 Function unknown
D JG479_18800 ankyrin repeat domain-containing protein K06867 K06867; uncharacterized protein
D JG479_18730 nuclear transport factor 2 family protein K06893 K06893; uncharacterized protein
D JG479_05155 YcjX family protein K06918 K06918; uncharacterized protein
D JG479_14010 DUF1289 domain-containing protein K06938 K06938; uncharacterized protein
D JG479_17150 DUF1289 domain-containing protein K06938 K06938; uncharacterized protein
D JG479_07370 YkgJ family cysteine cluster protein K06940 K06940; uncharacterized protein
D JG479_09665 YkgJ family cysteine cluster protein K06940 K06940; uncharacterized protein
D JG479_19600 YkgJ family cysteine cluster protein K06940 K06940; uncharacterized protein
D JG479_10140 HD domain-containing protein K06950 K06950; uncharacterized protein
D JG479_17270 FAD-dependent oxidoreductase K06954 K06954; uncharacterized protein
D JG479_00845 succinylglutamate desuccinylase/aspartoacylase family protein K06987 K06987; uncharacterized protein
D JG479_13800 succinylglutamate desuccinylase/aspartoacylase family protein K06987 K06987; uncharacterized protein
D JG479_13090 VOC family protein K06991 K06991; uncharacterized protein
D JG479_01470 VOC family protein K06996 K06996; uncharacterized protein
D JG479_19950 VOC family protein K06996 K06996; uncharacterized protein
D JG479_13850 esterase YqiA K07000 K07000; uncharacterized protein
D JG479_08460 MMPL family transporter K07003 K07003; uncharacterized protein
D JG479_00450 ExeM/NucH family extracellular endonuclease K07004 K07004; uncharacterized protein
D JG479_09095 pyridoxamine 5'-phosphate oxidase family protein K07006 K07006; uncharacterized protein
D JG479_06395 DUF3413 domain-containing protein K07014 K07014; uncharacterized protein
D JG479_00640 hydrolase K07019 K07019; uncharacterized protein
D JG479_10690 alpha/beta hydrolase K07020 K07020; uncharacterized protein
D JG479_07145 zinc ribbon domain-containing protein K07069 K07069; uncharacterized protein
D JG479_00655 YheV family putative metal-binding protein K07070 K07070; uncharacterized protein
D JG479_09280 TIGR01777 family oxidoreductase K07071 K07071; uncharacterized protein
D JG479_08075 permease K07089 K07089; uncharacterized protein
D JG479_04280 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D JG479_05450 TSUP family transporter K07090 K07090; uncharacterized protein
D JG479_11380 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D JG479_18850 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D JG479_12905 hypoxanthine phosphoribosyltransferase K07101 K07101; uncharacterized protein
D JG479_05375 YeeE/YedE family protein K07112 K07112; uncharacterized protein
D JG479_05380 YeeE/YedE family protein K07112 K07112; uncharacterized protein
D JG479_03045 penicillin-binding protein activator K07121 K07121; uncharacterized protein
D JG479_10080 sel1 repeat family protein K07126 K07126; uncharacterized protein
D JG479_17890 sel1 repeat family protein K07126 K07126; uncharacterized protein
D JG479_07930 MAPEG family protein K07136 K07136; uncharacterized protein
D JG479_17545 NAD(P)/FAD-dependent oxidoreductase K07137 K07137; uncharacterized protein
D JG479_17405 DUF418 domain-containing protein K07148 K07148; uncharacterized protein
D JG479_17305 LON peptidase substrate-binding domain-containing protein K07157 K07157; uncharacterized protein
D JG479_16545 yidD; (GenBank) membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein
D JG479_14495 GatB/YqeY domain-containing protein K09117 K09117; uncharacterized protein
D JG479_10965 DUF493 family protein K09158 K09158; uncharacterized protein
D JG479_16990 YcgN family cysteine cluster protein K09160 K09160; uncharacterized protein
D JG479_16255 PH domain-containing protein K09167 K09167; uncharacterized protein
D JG479_17265 DUF1365 domain-containing protein K09701 K09701; uncharacterized protein
D JG479_14225 DUF917 domain-containing protein K09703 K09703; uncharacterized protein
D JG479_06925 ACT domain-containing protein K09707 K09707; uncharacterized protein
D JG479_00955 DUF342 domain-containing protein K09749 K09749; uncharacterized protein
D JG479_11405 DUF342 domain-containing protein K09749 K09749; uncharacterized protein
D JG479_19975 YaiI/YqxD family protein K09768 K09768; uncharacterized protein
D JG479_09245 YciI family protein K09780 K09780; uncharacterized protein
D JG479_15945 DUF808 domain-containing protein K09781 K09781; uncharacterized protein
D JG479_09865 YeaH/YhbH family protein K09786 K09786; uncharacterized protein
D JG479_16275 YbaN family protein K09790 K09790; uncharacterized protein
D JG479_08400 Trm112 family protein K09791 K09791; uncharacterized protein
D JG479_06250 sulfite exporter TauE/SafE family protein K09792 K09792; uncharacterized protein
D JG479_01095 YdcH family protein K09794 K09794; uncharacterized protein
D JG479_13975 SIMPL domain-containing protein K09797 K09797; uncharacterized protein
D JG479_14460 divergent polysaccharide deacetylase family protein K09798 K09798; uncharacterized protein
D JG479_04790 RnfH family protein K09801 K09801; uncharacterized protein
D JG479_07940 SIMPL domain-containing protein K09807 K09807; uncharacterized protein
D JG479_12990 SIMPL domain-containing protein K09807 K09807; uncharacterized protein
D JG479_12100 nqrM; (GenBank) (Na+)-NQR maturation NqrM K05952 K05952; uncharacterized protein
D JG479_07485 GntR family transcriptional regulator K00243 K00243; uncharacterized protein
D JG479_06880 adenine DNA methylase K09859 K09859; uncharacterized protein
D JG479_13705 yaaA; (GenBank) peroxide stress protein YaaA K09861 K09861; uncharacterized protein
D JG479_14390 yacG; (GenBank) DNA gyrase inhibitor YacG K09862 K09862; uncharacterized protein
D JG479_12595 YjaG family protein K09891 K09891; uncharacterized protein
D JG479_01615 GTPase-activating protein K09894 K09894; uncharacterized protein
D JG479_13345 UPF0149 family protein K09895 K09895; uncharacterized protein
D JG479_13760 DUF413 domain-containing protein K09897 K09897; uncharacterized protein
D JG479_00635 YheU family protein K09898 K09898; uncharacterized protein
D JG479_06940 DUF412 domain-containing protein K09899 K09899; uncharacterized protein
D JG479_04150 DUF440 family protein K09901 K09901; uncharacterized protein
D JG479_17025 YcgL domain-containing protein K09902 K09902; uncharacterized protein
D JG479_06400 DUF1414 domain-containing protein K09904 K09904; uncharacterized protein
D JG479_02985 YhcB family protein K09908 K09908; uncharacterized protein
D JG479_00580 DUF2057 domain-containing protein K09909 K09909; uncharacterized protein
D JG479_15110 YacL family protein K09910 K09910; uncharacterized protein
D JG479_14820 DUF2058 domain-containing protein K09912 K09912; uncharacterized protein
D JG479_16120 YceH family protein K09915 K09915; uncharacterized protein
D JG479_05955 DUF1315 family protein K09916 K09916; uncharacterized protein
D JG479_04745 YebG family protein K09918 K09918; uncharacterized protein
D JG479_00280 N-acetyltransferase K09919 K09919; uncharacterized protein
D JG479_13860 DUF1249 domain-containing protein K09920 K09920; uncharacterized protein
D JG479_16030 DUF484 family protein K09921 K09921; uncharacterized protein
D JG479_11040 DUF2059 domain-containing protein K09924 K09924; uncharacterized protein
D JG479_06265 FixH family protein K09926 K09926; uncharacterized protein
D JG479_08420 DUF2062 domain-containing protein K09928 K09928; uncharacterized protein
D JG479_09930 putative DNA-binding domain-containing protein K09929 K09929; uncharacterized protein
D JG479_06890 DUF692 domain-containing protein K09930 K09930; uncharacterized protein
D JG479_09935 DUF692 domain-containing protein K09930 K09930; uncharacterized protein
D JG479_05905 DUF2066 domain-containing protein K09938 K09938; uncharacterized protein
D JG479_16280 PepSY-associated TM helix domain-containing protein K09939 K09939; uncharacterized protein
D JG479_16150 DUF4870 domain-containing protein K09940 K09940; uncharacterized protein
D JG479_12700 DUF1415 domain-containing protein K09941 K09941; uncharacterized protein
D JG479_14125 DUF3299 domain-containing protein K09950 K09950; uncharacterized protein
D JG479_04845 DUF3820 family protein K09954 K09954; uncharacterized protein
D JG479_19985 ACT domain-containing protein K09964 K09964; uncharacterized protein
D JG479_03460 DUF2237 domain-containing protein K09966 K09966; uncharacterized protein
D JG479_19300 hypothetical protein K09968 K09968; uncharacterized protein
D JG479_01495 TraB/GumN family protein K09973 K09973; uncharacterized protein
D JG479_01850 TraB/GumN family protein K09973 K09973; uncharacterized protein
D JG479_07405 DUF1287 domain-containing protein K09974 K09974; uncharacterized protein
D JG479_12705 YdbL family protein K09978 K09978; uncharacterized protein
D JG479_00225 DUF2170 family protein K09980 K09980; uncharacterized protein
D JG479_19470 zf-TFIIB domain-containing protein K09981 K09981; uncharacterized protein
D JG479_18870 DUF1272 domain-containing protein K09984 K09984; uncharacterized protein
D JG479_01600 DUF1285 domain-containing protein K09986 K09986; uncharacterized protein
D JG479_12450 VWA domain-containing protein K09989 K09989; uncharacterized protein
D JG479_09000 ThuA domain-containing protein K09992 K09992; uncharacterized protein
D JG479_14680 TIGR00153 family protein K07220 K07220; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: September 2, 2025