+D Transcription factors KO
#
Transcription Factors - Pseudomonas sp. NC02
%
!
AEukaryotic type
B Basic leucine zipper (bZIP)
C AP-1(-like) components, Jun
C AP-1(-like) components, Fos
C AP-1(-like) components, Maf
C AP-1(-like) components, NF-E2
C AP-1(-like) components, Fungal regulators
C AP-1(-like) components, CRE-BP/ATF
C CREB
C C/EBP-like factors
C bZIP/PAR
C Plant bZIP factors
C ZIP only
B Basic helix-loop-helix (bHLH)
C Ubiquitous (class A) factors
C Myogenic transcription factors
C Achaete-Scute
C Tal/Twist/Atonal/Hen, Lymphoid factors
C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors
C Tal/Twist/Atonal/Hen, HEN
C Tal/Twist/Atonal/Hen, Mesp
C Tal/Twist/Atonal/Hen, Atonal
C Tal/Twist/Atonal/Hen, Pancreatic factors
C Hairy, Hairy/E(SPL)
C Hairy, Fungal regulators
C Factors with PAS domain
C Yabby
C INO
C HLH domain only
B Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
C Ubiquitous bHLH-ZIP factors
C Cell cycle controlling factors, Myc
C Cell cycle controlling factors, Mad/Max
C Other bHLH-ZIP factors
B Other basic domains
C NF-1
C RF-X
C AP-2 (bHSH)
B Zinc finger
C Cys4 thyroid hormone receptor-like
C Cys4 hepatocyte nuclear factor 4-like
C Cys4 estrogen receptor-like
C Cys4 nerve growth factor IB-like
C Cys4 Fushi tarazu-F1-like
C Cys4 germ cell nuclear factor
C Cys4 Knirps/DAX1-like
C Cys4 GATA-factors
C Cys2His2 SP/KLF family and related proteins
C Cys2His2 GLI-like
C Cys2His2 Snail
C Cys2His2 BTB-ZF factors
C Cys2His2 BED
C Cys2His2 PRDM
C Cys2His2 metabolic regulators in fungi
C Cys2His2 others
C Cys2HisCys zinc factors
C Cys3His zinc factors
C Cys2CysHis zinc factors
C CXXC CpG-binding proteins
C Cys6 metabolic regulators in fungi
C Other zinc fingers
B Helix-turn-helix
C Homeo domain ANTP: HOXL
C Homeo domain ANTP: NKL
C Homeo domain Paired-related
C Homeo domain LIM
C Homeo domain POU
C Homeo domain SINE
C Homeo domain ZF
C Homeo domain CUT
C Homeo domain PROS
C Homeo domain TALE
C Homeo domain other
C Fork head/winged helix developmental regulators
C Fork head/winged helix tissue-specific regulators
C Fork head/winged helix cell cycle-controlling factors, E2F
C Fork head/winged helix cell cycle-controlling factors, DP
C Fork head/winged helix other regulators
C Stork head/winged helix factors
C Heat shock factors
C Tryptophan clusters Myb, Myb-factors
C Tryptophan clusters Myb, Myb-like factors
C Tryptophan clusters Ets-type
C Tryptophan clusters interferon-regulating factors
C TEA domain
C ARID
B beta-Scaffold factors with minor groove contacts
C RHR (Rel homology region) Rel/Ankyrin
C RHR (Rel homology region) Ankyrin only
C RHR (Rel homology region) NF-AT
C STAT
C p53
C MADS-box regulators of differentiation, MEF-2
C MADS-box regulators of differentiation, Homeotic genes
C MADS-box regulators of differentiation, Yeast regulators
C MADS-box responders to external signals
C SAND domain-containing proteins
C TATA-binding proteins
C HMG SOX
C HMG TCF-1
C HMG TOX
C HMG2-related
C UBF
C Other HMG box factors
C Heteromeric CCAAT factors
C Grainyhead
C Cold-shock domain factors, DbpA-like
C Cold-shock domain factors, YB-1/DbpB-like
C Cold-shock domain factors, FRG Y2-like
C Runt
C MYRF
B Other transcription factors
C HMGI(Y)
C NUPR
C Pocket domain Rb
C Pocket domain CBP
C T-box
C DMRT
C LRRFIP
C TCP
C AP2/ERF
C WRKY
C LOB
C GRAS
C NAC
C Copper-fist proteins fungal regulators
C Others
#
AProkaryotic type
B Helix-turn-helix
C AraC family
D C0058_11560 hpaA; (GenBank) 4-hydroxyphenylacetate catabolism regulatory protein HpaA K02508 hpaA; AraC family transcriptional regulator, 4-hydroxyphenylacetate 3-monooxygenase operon regulatory protein
D C0058_15440 AraC family transcriptional regulator K06599 chpD; AraC family transcriptional regulator, chemosensory pili system protein ChpD
D C0058_17020 AraC family transcriptional regulator K12243 pchR; AraC family transcriptional regulator, transcriptional activator of the genes for pyochelin and ferripyochelin receptors
D C0058_11465 transcriptional regulator FeaR K14063 feaR; AraC family transcriptional regulator, positive regulator of tynA and feaB
D C0058_12610 transcriptional regulator FeaR K14063 feaR; AraC family transcriptional regulator, positive regulator of tynA and feaB
D C0058_12685 transcriptional regulator FeaR K14063 feaR; AraC family transcriptional regulator, positive regulator of tynA and feaB
D C0058_07565 AraC family transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D C0058_30970 AraC family transcriptional regulator K18991 mtrA; AraC family transcriptional regulator, activator of mtrCDE
D C0058_24895 AraC family transcriptional regulator K13653 K13653; AraC family transcriptional regulator
D C0058_26700 AraC family transcriptional regulator K07506 K07506; AraC family transcriptional regulator
D C0058_15525 bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D C0058_30090 GlxA family transcriptional regulator K17736 cdhR; AraC family transcriptional regulator, carnitine catabolism transcriptional activator
D C0058_24550 GlxA family transcriptional regulator K21825 argR; AraC family transcriptional regulator, L-arginine-responsive activator
D C0058_23240 AraC family transcriptional regulator K21826 gbdR; AraC family transcriptional regulator, glycine betaine-responsive activator
D C0058_30130 GlxA family transcriptional regulator K21826 gbdR; AraC family transcriptional regulator, glycine betaine-responsive activator
C LysR family
D C0058_02755 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D C0058_02870 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D C0058_05020 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D C0058_05285 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D C0058_06740 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D C0058_07540 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D C0058_13335 transcriptional regulator GcvA K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D C0058_13860 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D C0058_17875 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D C0058_17925 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D C0058_19365 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D C0058_31585 DNA-binding transcriptional regulator DsdC K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D C0058_26440 LysR family transcriptional regulator K03576 metR; LysR family transcriptional regulator, regulator for metE and metH
D C0058_19760 transcriptional activator NhaR K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA
D C0058_31815 hydrogen peroxide-inducible genes activator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D C0058_25145 ArgP/LysG family DNA-binding transcriptional regulator K05596 argP; LysR family transcriptional regulator, arginine and lysine transport system/DNA replication regulator
D C0058_07600 transcriptional regulator CynR K11921 cynR; LysR family transcriptional regulator, cyn operon transcriptional activator
D C0058_29770 LysR family transcriptional regulator K11921 cynR; LysR family transcriptional regulator, cyn operon transcriptional activator
D C0058_09500 HTH-type transcriptional regulator CysB K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator
D C0058_30425 LysR family transcriptional regulator K13928 mdcR; LysR family transcriptional regulator, malonate utilization transcriptional regulator
D C0058_16415 LysR family transcriptional regulator K14057 abgR; LysR family transcriptional regulator, regulator of abg operon
D C0058_18870 LysR family transcriptional regulator K14057 abgR; LysR family transcriptional regulator, regulator of abg operon
D C0058_22405 LysR family transcriptional regulator K16135 dmlR; LysR family transcriptional regulator, transcriptional activator for dmlA
D C0058_09850 LysR family transcriptional regulator K17737 dhcR; LysR family transcriptional regulator, carnitine catabolism transcriptional activator
D C0058_19680 LysR family transcriptional regulator K17737 dhcR; LysR family transcriptional regulator, carnitine catabolism transcriptional activator
D C0058_17805 LysR family transcriptional regulator K17850 ampR; LysR family transcriptional regulator, regulator of gene expression of beta-lactamase
D C0058_07505 LysR family transcriptional regulator K18297 mexT; LysR family transcriptional regulator, mexEF-oprN operon transcriptional activator
D C0058_16785 LysR family transcriptional regulator K18297 mexT; LysR family transcriptional regulator, mexEF-oprN operon transcriptional activator
D C0058_01185 LysR family transcriptional regulator K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC
D C0058_14660 LysR family transcriptional regulator K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC
D C0058_15275 LysR family transcriptional regulator K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC
D C0058_32080 LysR family transcriptional regulator K21645 hypT; LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT
D C0058_03430 LysR family transcriptional regulator K21699 bauR; LysR family transcriptional regulator, transcriptional activator for bauABCD operon
D C0058_05370 LysR family transcriptional regulator K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
D C0058_32160 LysR family transcriptional regulator K21711 pycR; LysR family transcriptional regulator, putative pyruvate carboxylase regulator
D C0058_03600 LysR family transcriptional regulator K21757 benM; LysR family transcriptional regulator, benzoate and cis,cis-muconate-responsive activator of ben and cat genes
D C0058_12210 LysR family transcriptional regulator K23773 hdfR; LysR family transcriptional regulator, flagellar master operon regulator
D C0058_00190 LysR family transcriptional regulator K27042 trpI; LysR family transcriptional regulator, trpBA operon transcriptional activator
C DeoR family
D C0058_15320 DNA-binding transcriptional repressor DeoR K11534 deoR; DeoR family transcriptional regulator, deoxyribose operon repressor
D C0058_18585 DeoR/GlpR transcriptional regulator K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D C0058_26330 DeoR/GlpR family transcriptional regulator K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
C LacI family
D C0058_10875 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D C0058_12205 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D C0058_16480 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D C0058_17695 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D C0058_20095 XylR family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D C0058_18050 LacI family DNA-binding transcriptional regulator K02525 kdgR; LacI family transcriptional regulator, kdg operon repressor
D C0058_13760 LacI family transcriptional regulator K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
D C0058_27830 catabolite repressor/activator K03435 fruR1; LacI family transcriptional regulator, fructose operon transcriptional repressor
D C0058_24915 LacI family DNA-binding transcriptional regulator K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
C GntR family
D C0058_05665 treR; (GenBank) trehalose operon repressor K03486 treR2; GntR family transcriptional regulator, trehalose operon transcriptional repressor
D C0058_23415 phnF; (GenBank) phosphonate metabolism transcriptional regulator PhnF K02043 phnF; GntR family transcriptional regulator, phosphonate transport system regulatory protein
D C0058_01790 hutC; (GenBank) histidine utilization repressor K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor
D C0058_05730 phosphonate metabolism transcriptional regulator PhnF K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
D C0058_13915 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D C0058_16135 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D C0058_24090 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D C0058_03920 pdhR; (GenBank) FCD domain-containing protein K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D C0058_10390 PLP-dependent aminotransferase family protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D C0058_13060 PLP-dependent aminotransferase family protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D C0058_15840 DNA-binding protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D C0058_18455 DNA-binding protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D C0058_20010 DNA-binding protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D C0058_32115 PLP-dependent aminotransferase family protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D C0058_12460 GntR family transcriptional regulator K23466 tgnR; GntR family transcriptional regulator, trigonelline degradation regulator
C TetR/AcrR family
D C0058_30160 transcriptional regulator BetI K02167 betI; TetR/AcrR family transcriptional regulator, transcriptional repressor of bet genes
D C0058_06845 TetR family transcriptional regulator K03577 acrR; TetR/AcrR family transcriptional regulator, acrAB operon repressor
D C0058_03420 TetR family transcriptional regulator K09017 rutR; TetR/AcrR family transcriptional regulator
D C0058_21740 transcriptional regulator BetI K09017 rutR; TetR/AcrR family transcriptional regulator
D C0058_23270 TetR family transcriptional regulator K09017 rutR; TetR/AcrR family transcriptional regulator
D C0058_24735 TetR/AcrR family transcriptional regulator K19736 aefR; TetR/AcrR family transcriptional regulator, regulator of autoinduction and epiphytic fitness
D C0058_09310 TetR/AcrR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D C0058_18420 TetR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D C0058_22315 TetR/AcrR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D C0058_06120 TetR/AcrR family transcriptional regulator K18301 mexL; TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor
D C0058_02850 TetR family transcriptional regulator K22105 fabR; TetR/AcrR family transcriptional regulator, fatty acid biosynthesis regulator
D C0058_22530 transcriptional regulator BetI K22108 kstR2; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator
D C0058_17185 TetR/AcrR family transcriptional regulator K22294 nicS; TetR/AcrR family transcriptional regulator, upper aerobic nicotinate degradation pathway regulator
D C0058_17565 DUF1956 domain-containing protein K23777 cecR; TetR/AcrR family transcriptional regulator, regulator of cefoperazone and chloramphenicol sensitivity
C Lrp/AsnC family
D C0058_03625 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D C0058_16460 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D C0058_20815 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D C0058_21845 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D C0058_21915 leucine-responsive transcriptional regulator Lrp K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D C0058_28380 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D C0058_28435 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D C0058_31640 leucine-responsive transcriptional regulator Lrp K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D C0058_32370 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D C0058_20755 Lrp/AsnC family transcriptional regulator K15782 doeX; Lrp/AsnC family transcriptional regulator, regulator of ectoine-degradation genes
D C0058_19465 Lrp/AsnC family transcriptional regulator K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
D C0058_31100 Lrp/AsnC family transcriptional regulator K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
C LuxR family
D C0058_20870 LuxR family transcriptional regulator K20330 toxJ; LuxR family transcriptional regulator, activator of tox operons
D C0058_04940 HTH-type transcriptional regulator MalT K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein
D C0058_27215 helix-turn-helix transcriptional regulator K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein
C MarR family
D C0058_00755 MarR family transcriptional regulator K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D C0058_23815 transcriptional regulator SlyA K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D C0058_17200 MarR family transcriptional regulator K22296 nicR; MarR family transcriptional regulator, lower aerobic nicotinate degradation pathway regulator
D C0058_09540 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D C0058_09635 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
C MerR family
D C0058_03335 cueR; (GenBank) Cu(I)-responsive transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D C0058_22370 soxR; (GenBank) redox-sensitive transcriptional activator SoxR K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR
D C0058_04720 MerR family transcriptional regulator K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator
D C0058_04870 helix-turn-helix-type transcriptional regulator K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator
C Fur family
D C0058_03945 ferric iron uptake transcriptional regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D C0058_00390 transcriptional repressor K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
C IclR family
D C0058_06760 IclR family transcriptional regulator K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein
D C0058_13820 IclR family transcriptional regulator K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein
C CRP/FNR family
D C0058_00945 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D C0058_07700 cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D C0058_29370 cAMP-activated global transcriptional regulator CRP K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D C0058_08570 fumarate/nitrate reduction transcriptional regulator Fnr K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
C Rrf2 family
D C0058_05525 iscR; (GenBank) Fe-S cluster assembly transcriptional regulator IscR K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
C ArsR family
D C0058_15455 transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
C XRE family
C PadR family
C Other families
D C0058_25095 transcriptional regulator HexR K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator
D C0058_32175 MurR/RpiR family transcriptional regulator K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator
D C0058_29270 bifunctional biotin--[acetyl-CoA-carboxylase] synthetase/biotin operon repressor K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D C0058_03115 DNA-binding transcriptional regulator Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D C0058_26800 type II toxin-antitoxin system MqsA family antitoxin K13655 mqsA; HTH-type transcriptional regulator / antitoxin MqsA
D C0058_08175 transcriptional regulator K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D C0058_23700 sigma-54-dependent Fis family transcriptional regulator K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D C0058_11815 sigma-54-dependent Fis family transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D C0058_18555 sigma-54-dependent Fis family transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D C0058_28685 sigma-54-dependent Fis family transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D C0058_19110 sigma-54-dependent Fis family transcriptional regulator K11914 sfa2; sigma-54 dependent transcriptional regulator
D C0058_26690 nitric oxide reductase transcriptional regulator NorR K12266 norR; anaerobic nitric oxide reductase transcription regulator
D C0058_15690 CdaR family transcriptional regulator K02647 cdaR; carbohydrate diacid regulator
D C0058_17520 molybdenum-dependent transcriptional regulator K02019 modE; molybdate transport system regulatory protein
D C0058_29830 molybdenum-dependent transcriptional regulator K02019 modE; molybdate transport system regulatory protein
D C0058_20510 transcriptional regulator K07726 K07726; putative transcriptional regulator
B Ribbon-helix-helix
C CopG family
C Other families
D C0058_02275 putA; (GenBank) trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
B Other transcription factors
C BglG family
C Others
D C0058_10045 BolA family transcriptional regulator K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D C0058_32460 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D C0058_13640 rfaH; (GenBank) transcription/translation regulatory transformer protein RfaH K05785 rfaH; transcriptional antiterminator RfaH
D C0058_23770 sigma-54-dependent phenylalanine hydroxylase transcriptional regulator PhhR K03721 tyrR; transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport
D C0058_25340 Fis family transcriptional regulator K03721 tyrR; transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport
D C0058_07340 glycine cleavage system protein R K03567 gcvR; glycine cleavage system transcriptional repressor
D C0058_12605 paaX; (GenBank) phenylacetic acid degradation operon negative regulatory protein PaaX K02616 paaX; phenylacetic acid degradation operon negative regulatory protein
D C0058_15340 DNA-binding transcriptional regulator K05346 deoR; deoxyribonucleoside regulator
D C0058_20280 GNAT family N-acetyltransferase K06140 rnk; regulator of nucleoside diphosphate kinase
D C0058_31485 nucleoside diphosphate kinase regulator K06140 rnk; regulator of nucleoside diphosphate kinase
D C0058_30550 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D C0058_03760 AlpA family transcriptional regulator K07733 alpA; prophage regulatory protein
D C0058_13065 FMN-binding negative transcriptional regulator K07734 paiB; transcriptional regulator
D C0058_32120 FMN-binding negative transcriptional regulator K07734 paiB; transcriptional regulator
D C0058_30540 YqgE/AlgH family protein K07735 algH; putative transcriptional regulator
D C0058_04145 dksA; (GenBank) RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D C0058_18660 conjugal transfer protein TraR K06204 dksA; RNA polymerase-binding transcription factor
D C0058_32240 dksA; (GenBank) RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D C0058_27145 division/cell wall cluster transcriptional repressor MraZ K03925 mraZ; transcriptional regulator MraZ
!
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: July 7, 2026
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Classification taken and modified from TRANSFAC 7.0