+D GENES KO #

  KEGG Orthology (KO) - Pelotomaculum thermopropionicum

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:pth00010] D PTH_2734 NagC; transcriptional regulator/sugar kinase K25026 glk; glucokinase [EC:2.7.1.2] D PTH_2731 hypothetical protein K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D PTH_2215 PfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D PTH_1386 PfkA; 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D PTH_2838 Fba; fructose/tagatose bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D PTH_0932 archaeal fructose 1,6-bisphosphatase K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11] D PTH_2721 TpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D PTH_2723 GapA; glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D PTH_1007 GapA; glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D PTH_2722 Pgk; 3-phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D PTH_2720 GpmI; phosphoglyceromutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D PTH_1598 predicted phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D PTH_2718 hypothetical protein K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D PTH_2719 hypothetical protein K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D PTH_2214 PykF; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D PTH_0903 PpsA; phosphoenolpyruvate synthase/pyruvate phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D PTH_1369 MmcM; pyruvate:ferredoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D PTH_0056 PorA; pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D PTH_0847 PorA; pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D PTH_1205 PorA; pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D PTH_1206 PorB; pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D PTH_0057 PorB; pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D PTH_0846 PorB; pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D PTH_0747 Mdh; malate/lactate dehydrogenases K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D PTH_1584 putative aldehyde/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D PTH_0606 EutG; alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D PTH_2131 Acs; acyl-coenzyme A synthetases/AMP-(fatty) acid ligases K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D PTH_1750 acyl-CoA synthetase K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13] D PTH_1507 acyl-CoA synthetase K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13] D PTH_0490 acyl-CoA synthetase K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13] D PTH_2237 acyl-CoA synthetase K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13] D PTH_0398 ManB; phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D PTH_1008 PckA; phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] C 00020 Citrate cycle (TCA cycle) [PATH:pth00020] D PTH_2517 LeuB; isocitrate/isopropylmalate dehydrogenase K00030 IDH3; isocitrate dehydrogenase (NAD+) [EC:1.1.1.41] D PTH_0056 PorA; pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D PTH_0847 PorA; pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D PTH_1205 PorA; pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D PTH_1206 PorB; pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D PTH_0057 PorB; pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D PTH_0846 PorB; pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D PTH_1207 PorG; pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3] D PTH_0845 PorG; pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3] D PTH_0058 PorG; pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3] D PTH_1204 ferredoxin K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3] D PTH_0848 ferredoxin K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3] D PTH_0059 ferredoxin K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3] D PTH_1359 MmcD2; succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D PTH_1358 MmcD1; succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D PTH_1017 SdhA; succinate dehydrogenase/fumarate reductase, flavoprotein subunit K00233 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1 7.1.1.12] D PTH_1018 SdhB; succinate dehydrogenase/fumarate reductase, Fe-S protein subunit K25995 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1 7.1.1.12] D PTH_1016 SdhC; succinate dehydrogenase/fumarate reductase, cytochrome b subunit K25996 frdC; succinate dehydrogenase subunit C D PTH_1356 MmcB; fumarase, N-terminal domain K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2] D PTH_1357 MmcC; fumarase, C-terminal domain K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2] D PTH_1367 MmcK; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D PTH_1008 PckA; phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D PTH_1369 MmcM; pyruvate:ferredoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] C 00030 Pentose phosphate pathway [PATH:pth00030] D PTH_2731 hypothetical protein K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D PTH_1779 Rpe; pentose-5-phosphate-3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D PTH_2750 transketolase, N-terminal subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D PTH_2749 transketolase, C-terminal subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D PTH_2837 MipB; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D PTH_2825 RpiB; ribose 5-phosphate isomerase RpiB K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D PTH_1389 DeoC; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4] D PTH_1211 DeoB; hosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7] D PTH_0398 ManB; phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D PTH_0105 PrsA; phosphoribosylpyrophosphate synthetase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D PTH_2604 aldehyde:ferredoxin oxidoreductase K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5] D PTH_0921 aldehyde:ferredoxin oxidoreductase K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5] D PTH_0852 aldehyde:ferredoxin oxidoreductase K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5] D PTH_0610 aldehyde:ferredoxin oxidoreductase K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5] D PTH_2897 aldehyde:ferredoxin oxidoreductase K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5] D PTH_0487 aldehyde:ferredoxin oxidoreductase K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5] D PTH_0494 aldehyde:ferredoxin oxidoreductase K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5] D PTH_0509 aldehyde:ferredoxin oxidoreductase K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5] D PTH_0865 aldehyde:ferredoxin oxidoreductase K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5] D PTH_2409 aldehyde:ferredoxin oxidoreductase K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5] D PTH_2838 Fba; fructose/tagatose bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D PTH_0932 archaeal fructose 1,6-bisphosphatase K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11] D PTH_2215 PfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D PTH_1386 PfkA; 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] C 00040 Pentose and glucuronate interconversions [PATH:pth00040] D PTH_2768 GalU; UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D PTH_1779 Rpe; pentose-5-phosphate-3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D PTH_0271 Tdh; threonine dehydrogenase and related Zn-dependent dehydrogenases K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14] D PTH_0624 AdhP; Zn-dependent alcohol dehydrogenases K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14] D PTH_0920 AraD; ribulose-5-phosphate 4-epimerase and related epimerases and aldolases K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17] C 00051 Fructose and mannose metabolism [PATH:pth00051] D PTH_0398 ManB; phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D PTH_2238 ManB; phosphomannomutase K16881 K16881; mannose-1-phosphate guanylyltransferase / phosphomannomutase [EC:2.7.7.13 5.4.2.8] D PTH_0920 AraD; ribulose-5-phosphate 4-epimerase and related epimerases and aldolases K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17] D PTH_2215 PfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D PTH_1386 PfkA; 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D PTH_0271 Tdh; threonine dehydrogenase and related Zn-dependent dehydrogenases K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14] D PTH_0624 AdhP; Zn-dependent alcohol dehydrogenases K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14] D PTH_2838 Fba; fructose/tagatose bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D PTH_0932 archaeal fructose 1,6-bisphosphatase K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11] D PTH_2721 TpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D PTH_2825 RpiB; ribose 5-phosphate isomerase RpiB K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] C 00052 Galactose metabolism [PATH:pth00052] D PTH_1331 GalT; galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] D PTH_2767 WcaG; nucleoside-diphosphate-sugar epimerases K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D PTH_0441 GalE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D PTH_1101 WcaG; nucleoside-diphosphate-sugar epimerases K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D PTH_2768 GalU; UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D PTH_0398 ManB; phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D PTH_2734 NagC; transcriptional regulator/sugar kinase K25026 glk; glucokinase [EC:2.7.1.2] D PTH_2215 PfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D PTH_1386 PfkA; 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] C 00053 Ascorbate and aldarate metabolism C 00500 Starch and sucrose metabolism [PATH:pth00500] D PTH_0618 Cof; predicted hydrolase K07024 SPP; sucrose-6-phosphatase [EC:3.1.3.24] D PTH_2768 GalU; UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D PTH_2228 uncharacterized conserved protein K16149 K16149; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D PTH_2008 GlgP; glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D PTH_1585 MalQ; 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25] D PTH_1588 TreY; maltooligosyl trehalose synthase K06044 treY; (1->4)-alpha-D-glucan 1-alpha-D-glucosylmutase [EC:5.4.99.15] D PTH_1586 GlgB; 1,4-alpha-glucan branching enzyme K01236 treZ; maltooligosyltrehalose trehalohydrolase [EC:3.2.1.141] D PTH_1589 RfaG; glycosyltransferase K13057 treT; trehalose synthase [EC:2.4.1.245] D PTH_0561 OtsB; trehalose-6-phosphatase K01087 otsB; trehalose 6-phosphate phosphatase [EC:3.1.3.12] D PTH_0560 OtsA; trehalose-6-phosphate synthase K16055 TPS; trehalose 6-phosphate synthase/phosphatase [EC:2.4.1.15 3.1.3.12] D PTH_0398 ManB; phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D PTH_2734 NagC; transcriptional regulator/sugar kinase K25026 glk; glucokinase [EC:2.7.1.2] D PTH_2731 hypothetical protein K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:pth00520] D PTH_2281 beta-glucosidase-related glycosidases and D-alanyl-D-alanine dipeptidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D PTH_0539 GlmS; glucosamine 6-phosphate synthetase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D PTH_0538 ManB; phosphomannomutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D PTH_0104 GlmU; N-acetylglucosamine-1-phosphate uridyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D PTH_2858 MurA; UDP-N-acetylglucosamine enolpyruvyl transferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D PTH_1858 MurA; UDP-N-acetylglucosamine enolpyruvyl transferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D PTH_1859 MurB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D PTH_2821 WecB; UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D PTH_1076 WecC; UDP-N-acetyl-D-mannosaminuronate dehydrogenase K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136] D PTH_1113 MviM; predicted dehydrogenases and related proteins K13020 wlbA; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335] D PTH_0380 carbonic anhydrases/acetyltransferases K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201] D PTH_0384 WecB; UDP-N-acetylglucosamine 2-epimerase K13019 wbpI; UDP-GlcNAc3NAcA epimerase [EC:5.1.3.23] D PTH_1103 WecB; UDP-N-acetylglucosamine 2-epimerase K13019 wbpI; UDP-GlcNAc3NAcA epimerase [EC:5.1.3.23] D PTH_2734 NagC; transcriptional regulator/sugar kinase K25026 glk; glucokinase [EC:2.7.1.2] D PTH_0398 ManB; phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D PTH_2768 GalU; UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D PTH_1331 GalT; galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] D PTH_2767 WcaG; nucleoside-diphosphate-sugar epimerases K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D PTH_0441 GalE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D PTH_1101 WcaG; nucleoside-diphosphate-sugar epimerases K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D PTH_2731 hypothetical protein K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D PTH_2238 ManB; phosphomannomutase K16881 K16881; mannose-1-phosphate guanylyltransferase / phosphomannomutase [EC:2.7.7.13 5.4.2.8] D PTH_1115 WecE; predicted pyridoxal phosphate-dependent enzyme K13010 per; perosamine synthetase [EC:2.6.1.102] C 00620 Pyruvate metabolism [PATH:pth00620] D PTH_2131 Acs; acyl-coenzyme A synthetases/AMP-(fatty) acid ligases K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D PTH_1369 MmcM; pyruvate:ferredoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D PTH_0056 PorA; pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D PTH_0847 PorA; pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D PTH_1205 PorA; pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D PTH_1206 PorB; pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D PTH_0057 PorB; pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D PTH_0846 PorB; pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D PTH_1584 putative aldehyde/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D PTH_0482 MhpF; acetaldehydede hydrogenase K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10] D PTH_0606 EutG; alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D PTH_2214 PykF; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D PTH_2216 AccA; acetyl-CoA carboxylase alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D PTH_1175 Acetyl/propionyl-CoA carboxylase, alpha subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D PTH_1190 AccC; biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D PTH_2217 AccD; acetyl-CoA carboxylase beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D PTH_1653 AcyP; acylphosphatases K01512 acyP; acylphosphatase [EC:3.6.1.7] D PTH_0512 acyl CoA:acetate/3-ketoacid CoA transferase K01026 pct; propionate CoA-transferase [EC:2.8.3.1] D PTH_1541 acyl CoA:acetate/3-ketoacid CoA transferase K01026 pct; propionate CoA-transferase [EC:2.8.3.1] D PTH_1577 acylCoA:acetate/3-ketoacidCoAtransferase K01026 pct; propionate CoA-transferase [EC:2.8.3.1] D PTH_2429 hypothetical Acyl CoA transferase K01026 pct; propionate CoA-transferase [EC:2.8.3.1] D PTH_1771 acyl CoA:acetate/3-ketoacid CoA transferase K01026 pct; propionate CoA-transferase [EC:2.8.3.1] D PTH_1750 acyl-CoA synthetase K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13] D PTH_1507 acyl-CoA synthetase K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13] D PTH_0490 acyl-CoA synthetase K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13] D PTH_2237 acyl-CoA synthetase K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13] D PTH_0747 Mdh; malate/lactate dehydrogenases K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D PTH_1047 GloB; Zn-dependent hydrolases K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D PTH_2688 GloB; Zn-dependent hydrolases K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D PTH_2899 SfcA; malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D PTH_1174 hypothetical protein K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2] D PTH_1367 MmcK; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D PTH_1356 MmcB; fumarase, N-terminal domain K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2] D PTH_1357 MmcC; fumarase, C-terminal domain K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2] D PTH_1017 SdhA; succinate dehydrogenase/fumarate reductase, flavoprotein subunit K00233 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1 7.1.1.12] D PTH_1018 SdhB; succinate dehydrogenase/fumarate reductase, Fe-S protein subunit K25995 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1 7.1.1.12] D PTH_1016 SdhC; succinate dehydrogenase/fumarate reductase, cytochrome b subunit K25996 frdC; succinate dehydrogenase subunit C D PTH_1008 PckA; phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D PTH_0903 PpsA; phosphoenolpyruvate synthase/pyruvate phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D PTH_0270 PaaJ; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D PTH_0531 LeuA; isopropylmalate/homocitrate/citramalate synthases K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D PTH_0535 LeuA; isopropylmalate/homocitrate/citramalate synthases K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D PTH_2520 LeuA; isopropylmalate/homocitrate/citramalate synthases K02594 nifV; homocitrate synthase NifV [EC:2.3.3.14] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:pth00630] D PTH_2131 Acs; acyl-coenzyme A synthetases/AMP-(fatty) acid ligases K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D PTH_1367 MmcK; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D PTH_0270 PaaJ; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D PTH_1363 MmcG; methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D PTH_1362 MmcF; methylmalonyl-CoA mutase, C-terminal domain/subunit K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2] D PTH_1361 MmcE; methylmalonyl-CoA mutase, N-terminal domain/subunit K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2] D PTH_2420 glutamate mutase epsilon subunit K19268 glmE; methylaspartate mutase epsilon subunit [EC:5.4.99.1] D PTH_2419 Sbm; methylmalonyl-CoA mutase, C-terminal domain/subunit K01846 glmS; methylaspartate mutase sigma subunit [EC:5.4.99.1] D PTH_2230 GlcD; FAD/FMN-containing dehydrogenases K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14] D PTH_1881 GlcD; FAD/FMN-containing dehydrogenases K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14] D PTH_1882 GlpC; Fe-S oxidoreductase K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14] D PTH_2231 GlpC; Fe-S oxidoreductase K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14] D PTH_0733 GlnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PTH_0909 GlnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PTH_2298 GlnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PTH_0731 GlnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PTH_2824 GlyA; glycine/serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D PTH_1711 hypothetical formate dehydrogenase K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D PTH_1712 BisC; anaerobic dehydrogenases, typically selenocysteine-containing K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D PTH_2645 hypothetical formate dehydrogenase K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D PTH_1713 HybA; Fe-S-cluster-containing hydrogenase components 1 K00124 fdoH; formate dehydrogenase iron-sulfur subunit D PTH_0669 HybA; Fe-S-cluster-containing hydrogenase components 1 K00124 fdoH; formate dehydrogenase iron-sulfur subunit D PTH_1703 HybA; Fe-S-cluster-containing hydrogenase components 1 K00124 fdoH; formate dehydrogenase iron-sulfur subunit D PTH_2705 FdnI; cytochrome b subunit of formate dehydrogenase K00127 fdoI; formate dehydrogenase subunit gamma C 00640 Propanoate metabolism [PATH:pth00640] D PTH_2131 Acs; acyl-coenzyme A synthetases/AMP-(fatty) acid ligases K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D PTH_0512 acyl CoA:acetate/3-ketoacid CoA transferase K01026 pct; propionate CoA-transferase [EC:2.8.3.1] D PTH_1541 acyl CoA:acetate/3-ketoacid CoA transferase K01026 pct; propionate CoA-transferase [EC:2.8.3.1] D PTH_1577 acylCoA:acetate/3-ketoacidCoAtransferase K01026 pct; propionate CoA-transferase [EC:2.8.3.1] D PTH_2429 hypothetical Acyl CoA transferase K01026 pct; propionate CoA-transferase [EC:2.8.3.1] D PTH_1771 acyl CoA:acetate/3-ketoacid CoA transferase K01026 pct; propionate CoA-transferase [EC:2.8.3.1] D PTH_1750 acyl-CoA synthetase K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13] D PTH_1507 acyl-CoA synthetase K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13] D PTH_0490 acyl-CoA synthetase K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13] D PTH_2237 acyl-CoA synthetase K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13] D PTH_2216 AccA; acetyl-CoA carboxylase alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D PTH_1175 Acetyl/propionyl-CoA carboxylase, alpha subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D PTH_1190 AccC; biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D PTH_2217 AccD; acetyl-CoA carboxylase beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D PTH_1185 GabT; 4-aminobutyrate aminotransferase and related aminotransferases K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D PTH_1363 MmcG; methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D PTH_1362 MmcF; methylmalonyl-CoA mutase, C-terminal domain/subunit K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2] D PTH_1361 MmcE; methylmalonyl-CoA mutase, N-terminal domain/subunit K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2] D PTH_1358 MmcD1; succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D PTH_1359 MmcD2; succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D PTH_0747 Mdh; malate/lactate dehydrogenases K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D PTH_0510 EutG; alcohol dehydrogenase K00086 dhaT; 1,3-propanediol dehydrogenase [EC:1.1.1.202] C 00650 Butanoate metabolism [PATH:pth00650] D PTH_0270 PaaJ; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D PTH_0272 FadB; 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D PTH_0515 CaiD; enoyl-CoA hydratase/carnithine racemase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17] D PTH_0268 AtoD; acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9] D PTH_0269 AtoA; acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9] D PTH_1584 putative aldehyde/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D PTH_0482 MhpF; acetaldehydede hydrogenase K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10] D PTH_1366 MmcJ; methylmalonyl-CoA decarboxylase, gamma subunit K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma D PTH_2043 AtoD; acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit K01039 gctA; glutaconate CoA-transferase, subunit A [EC:2.8.3.12] D PTH_2044 AtoD; acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit K01039 gctA; glutaconate CoA-transferase, subunit A [EC:2.8.3.12] D PTH_2042 AtoA; acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit K01040 gctB; glutaconate CoA-transferase, subunit B [EC:2.8.3.12] D PTH_2045 AtoA; acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit K01040 gctB; glutaconate CoA-transferase, subunit B [EC:2.8.3.12] D PTH_1017 SdhA; succinate dehydrogenase/fumarate reductase, flavoprotein subunit K00233 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1 7.1.1.12] D PTH_1018 SdhB; succinate dehydrogenase/fumarate reductase, Fe-S protein subunit K25995 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1 7.1.1.12] D PTH_1016 SdhC; succinate dehydrogenase/fumarate reductase, cytochrome b subunit K25996 frdC; succinate dehydrogenase subunit C D PTH_1185 GabT; 4-aminobutyrate aminotransferase and related aminotransferases K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D PTH_1222 aromatic ring hydroxylase K14534 abfD; 4-hydroxybutyryl-CoA dehydratase / vinylacetyl-CoA-Delta-isomerase [EC:4.2.1.120 5.3.3.3] D PTH_1770 aromatic ring hydroxylase K14534 abfD; 4-hydroxybutyryl-CoA dehydratase / vinylacetyl-CoA-Delta-isomerase [EC:4.2.1.120 5.3.3.3] D PTH_1369 MmcM; pyruvate:ferredoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D PTH_0056 PorA; pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D PTH_0847 PorA; pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D PTH_1205 PorA; pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D PTH_1206 PorB; pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D PTH_0057 PorB; pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D PTH_0846 PorB; pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D PTH_0527 IlvB; thiamine pyrophosphate-requiring enzymes K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D PTH_0530 IlvB; thiamine pyrophosphate-requiring enzymes K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D PTH_0528 IlvH; acetolactate synthase K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D PTH_0736 IlvH; acetolactate synthase, small (regulatory) subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D PTH_2358 AlsD; alpha-acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5] D PTH_2318 AlsD; alpha-acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5] D PTH_1681 Tdh; threonine dehydrogenase and related Zn-dependent dehydrogenases K00004 BDH; (R,R)-butanediol dehydrogenase / meso-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.4 1.1.1.- 1.1.1.303] C 00660 C5-Branched dibasic acid metabolism [PATH:pth00660] D PTH_0527 IlvB; thiamine pyrophosphate-requiring enzymes K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D PTH_0530 IlvB; thiamine pyrophosphate-requiring enzymes K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D PTH_0528 IlvH; acetolactate synthase K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D PTH_0736 IlvH; acetolactate synthase, small (regulatory) subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D PTH_2358 AlsD; alpha-acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5] D PTH_2318 AlsD; alpha-acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5] D PTH_1358 MmcD1; succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D PTH_1359 MmcD2; succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D PTH_2420 glutamate mutase epsilon subunit K19268 glmE; methylaspartate mutase epsilon subunit [EC:5.4.99.1] D PTH_2419 Sbm; methylmalonyl-CoA mutase, C-terminal domain/subunit K01846 glmS; methylaspartate mutase sigma subunit [EC:5.4.99.1] D PTH_0532 LeuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D PTH_2519 LeuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D PTH_0533 LeuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D PTH_2518 LeuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D PTH_0534 LeuB; isocitrate/isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism [PATH:pth00562] D PTH_1370 hypothetical protein K01114 plc; phospholipase C [EC:3.1.4.3] D PTH_2721 TpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:pth00190] D PTH_1379 NuoE; NADH:ubiquinone oxidoreductase 24 kD subunit K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2] D PTH_2012 NuoE; NADH:ubiquinone oxidoreductase, 24 kD subunit K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2] D PTH_2649 NuoE; NADH:ubiquinone oxidoreductase 24 kD subunit K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2] D PTH_2011 NuoF; NADH:ubiquinone oxidoreductase, NADH-binding 51 kD subunit K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2] D PTH_2648 NuoF; NADH:ubiquinone oxidoreductase, NADH-binding 51 kD subunit K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2] D PTH_1017 SdhA; succinate dehydrogenase/fumarate reductase, flavoprotein subunit K00233 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1 7.1.1.12] D PTH_1018 SdhB; succinate dehydrogenase/fumarate reductase, Fe-S protein subunit K25995 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1 7.1.1.12] D PTH_1016 SdhC; succinate dehydrogenase/fumarate reductase, cytochrome b subunit K25996 frdC; succinate dehydrogenase subunit C D PTH_2814 AtpA; F0F1-type ATP synthase, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D PTH_2812 AtpD; F0F1-type ATP synthase, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D PTH_2813 AtpG; F0F1-type ATP synthase, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D PTH_2815 AtpH; F0F1-type ATP synthase, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D PTH_2811 AtpC; F0F1-type ATP synthase, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D PTH_2818 AtpB; F0F1-type ATP synthase, subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a D PTH_2816 AtpF; F0F1-type ATP synthase, subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b D PTH_2817 AtpE; F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K K02110 ATPF0C; F-type H+-transporting ATPase subunit c D PTH_2056 Gph; predicted phosphatases K06019 ppaX; pyrophosphatase PpaX [EC:3.6.1.1] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation by Calvin cycle [PATH:pth00710] D PTH_2722 Pgk; 3-phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D PTH_2723 GapA; glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D PTH_1007 GapA; glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D PTH_2838 Fba; fructose/tagatose bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D PTH_2750 transketolase, N-terminal subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D PTH_2749 transketolase, C-terminal subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D PTH_2825 RpiB; ribose 5-phosphate isomerase RpiB K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D PTH_2721 TpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D PTH_1779 Rpe; pentose-5-phosphate-3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D PTH_2837 MipB; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D PTH_1008 PckA; phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D PTH_0903 PpsA; phosphoenolpyruvate synthase/pyruvate phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D PTH_1367 MmcK; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] C 00720 Other carbon fixation pathways [PATH:pth00720] D PTH_1369 MmcM; pyruvate:ferredoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D PTH_0903 PpsA; phosphoenolpyruvate synthase/pyruvate phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D PTH_1367 MmcK; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D PTH_1356 MmcB; fumarase, N-terminal domain K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2] D PTH_1357 MmcC; fumarase, C-terminal domain K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2] D PTH_1017 SdhA; succinate dehydrogenase/fumarate reductase, flavoprotein subunit K00233 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1 7.1.1.12] D PTH_1018 SdhB; succinate dehydrogenase/fumarate reductase, Fe-S protein subunit K25995 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1 7.1.1.12] D PTH_1016 SdhC; succinate dehydrogenase/fumarate reductase, cytochrome b subunit K25996 frdC; succinate dehydrogenase subunit C D PTH_1359 MmcD2; succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D PTH_1358 MmcD1; succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D PTH_1222 aromatic ring hydroxylase K14534 abfD; 4-hydroxybutyryl-CoA dehydratase / vinylacetyl-CoA-Delta-isomerase [EC:4.2.1.120 5.3.3.3] D PTH_1770 aromatic ring hydroxylase K14534 abfD; 4-hydroxybutyryl-CoA dehydratase / vinylacetyl-CoA-Delta-isomerase [EC:4.2.1.120 5.3.3.3] D PTH_0270 PaaJ; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D PTH_0056 PorA; pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D PTH_0847 PorA; pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D PTH_1205 PorA; pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D PTH_1206 PorB; pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D PTH_0057 PorB; pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D PTH_0846 PorB; pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D PTH_1207 PorG; pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3] D PTH_0845 PorG; pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3] D PTH_0058 PorG; pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3] D PTH_1204 ferredoxin K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3] D PTH_0848 ferredoxin K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3] D PTH_0059 ferredoxin K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3] D PTH_2216 AccA; acetyl-CoA carboxylase alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D PTH_1175 Acetyl/propionyl-CoA carboxylase, alpha subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D PTH_1190 AccC; biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D PTH_2217 AccD; acetyl-CoA carboxylase beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D PTH_1363 MmcG; methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D PTH_1361 MmcE; methylmalonyl-CoA mutase, N-terminal domain/subunit K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2] D PTH_1362 MmcF; methylmalonyl-CoA mutase, C-terminal domain/subunit K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2] D PTH_1183 FolD; 5,10-methylene-tetrahydrofolate dehydrogenase/methenyl tetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D PTH_1184 methenyl tetrahydrofolate cyclohydrolase K01500 fchA; methenyltetrahydrofolate cyclohydrolase [EC:3.5.4.9] D PTH_1006 MetF; 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D PTH_1004 MetH; methionine synthase I K15023 acsE; 5-methyltetrahydrofolate corrinoid/iron sulfur protein methyltransferase [EC:2.1.1.258] D PTH_0486 HycB; Fe-S-cluster K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit D PTH_0609 HycB; Fe-S-cluster-containing hydrogenase components 2 K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit D PTH_1001 CdhE; CO dehydrogenase/acetyl-CoA synthase gamma subunit K00197 cdhE; acetyl-CoA decarbonylase/synthase, CODH/ACS complex subunit gamma [EC:2.1.1.245] D PTH_1003 CdhD; CO dehydrogenase/acetyl-CoA synthase delta subunit K00194 cdhD; acetyl-CoA decarbonylase/synthase, CODH/ACS complex subunit delta [EC:2.1.1.245] D PTH_2131 Acs; acyl-coenzyme A synthetases/AMP-(fatty) acid ligases K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] C 00680 Methane metabolism [PATH:pth00680] D PTH_1711 hypothetical formate dehydrogenase K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D PTH_1712 BisC; anaerobic dehydrogenases, typically selenocysteine-containing K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D PTH_2645 hypothetical formate dehydrogenase K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D PTH_1713 HybA; Fe-S-cluster-containing hydrogenase components 1 K00124 fdoH; formate dehydrogenase iron-sulfur subunit D PTH_0669 HybA; Fe-S-cluster-containing hydrogenase components 1 K00124 fdoH; formate dehydrogenase iron-sulfur subunit D PTH_1703 HybA; Fe-S-cluster-containing hydrogenase components 1 K00124 fdoH; formate dehydrogenase iron-sulfur subunit D PTH_2705 FdnI; cytochrome b subunit of formate dehydrogenase K00127 fdoI; formate dehydrogenase subunit gamma D PTH_1407 RnfC; predicted NADH:ubiquinone oxidoreductase, subunit RnfC K00125 fdhB; formate dehydrogenase (coenzyme F420) beta subunit [EC:1.17.98.3 1.8.98.6] D PTH_1001 CdhE; CO dehydrogenase/acetyl-CoA synthase gamma subunit K00197 cdhE; acetyl-CoA decarbonylase/synthase, CODH/ACS complex subunit gamma [EC:2.1.1.245] D PTH_1003 CdhD; CO dehydrogenase/acetyl-CoA synthase delta subunit K00194 cdhD; acetyl-CoA decarbonylase/synthase, CODH/ACS complex subunit delta [EC:2.1.1.245] D PTH_0486 HycB; Fe-S-cluster K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit D PTH_0609 HycB; Fe-S-cluster-containing hydrogenase components 2 K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit D PTH_2824 GlyA; glycine/serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D PTH_2718 hypothetical protein K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D PTH_2719 hypothetical protein K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D PTH_1367 MmcK; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D PTH_2838 Fba; fructose/tagatose bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D PTH_0932 archaeal fructose 1,6-bisphosphatase K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11] D PTH_2215 PfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D PTH_1386 PfkA; 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D PTH_1484 formylmethanofuran dehydrogenase subunit E K11261 fwdE; formylmethanofuran dehydrogenase subunit E [EC:1.2.7.12] D PTH_1492 FrhB; coenzyme F420-reducing hydrogenase, beta subunit K00441 frhB; coenzyme F420 hydrogenase subunit beta [EC:1.12.98.1] D PTH_1410 HdrA; heterodisulfide reductase, subunit A and related polyferredoxins K03388 hdrA2; heterodisulfide reductase subunit A2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6] D PTH_1412 HdrB; heterodisulfide reductase, subunit B K03389 hdrB2; heterodisulfide reductase subunit B2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6] D PTH_1413 GlpC; Fe-S oxidoreductase K03390 hdrC2; heterodisulfide reductase subunit C2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6] D PTH_1409 FrhD; coenzyme F420-reducing hydrogenase, delta subunit K14127 mvhD; F420-non-reducing hydrogenase iron-sulfur subunit [EC:1.12.99.- 1.8.98.5 1.8.98.6] D PTH_2131 Acs; acyl-coenzyme A synthetases/AMP-(fatty) acid ligases K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D PTH_2720 GpmI; phosphoglyceromutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D PTH_1598 predicted phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D PTH_0012 SerA; phosphoglycerate dehydrogenase and related dehydrogenases K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D PTH_1315 GpmB; fructose-2,6-bisphosphatase K22305 psp; phosphoserine phosphatase [EC:3.1.3.3] D PTH_1816 uncharacterized conserved protein K08097 comA; phosphosulfolactate synthase [EC:4.4.1.19] C 00910 Nitrogen metabolism [PATH:pth00910] D PTH_0779 6Fe-6S prismane cluster-containing protein K05601 hcp; hydroxylamine reductase [EC:1.7.99.1] D PTH_0050 GdhA; glutamate dehydrogenase/leucine dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D PTH_0733 GlnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PTH_0909 GlnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PTH_2298 GlnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PTH_0731 GlnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PTH_0734 GltB; glutamate synthase domain 2 K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D PTH_1181 GltD; NADPH-dependent glutamate synthase beta chain and related oxidoreductases K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D PTH_0735 GltD; NADPH-dependent glutamate synthase beta chain and related oxidoreductases K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D PTH_2676 CynT; carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] C 00920 Sulfur metabolism [PATH:pth00920] D PTH_0235 TauA; ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic components K15553 ssuA; sulfonate transport system substrate-binding protein D PTH_0237 TauC; ABC-type nitrate/sulfonate/bicarbonate transport systemM permease component K15554 ssuC; sulfonate transport system permease protein D PTH_0236 TauB; ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D PTH_0241 MET3; ATP sulfurylase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] D PTH_0238 CysC; adenylylsulfate kinase and related kinases K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25] D PTH_1271 exopolyphosphatase-related proteins K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] D PTH_0239 SdhA; succinate dehydrogenase/fumarate reductase, flavoprotein subunit K00394 aprA; adenylylsulfate reductase, subunit A [EC:1.8.99.2] D PTH_0240 ferredoxin K00395 aprB; adenylylsulfate reductase, subunit B [EC:1.8.99.2] D PTH_0242 DsrA; dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits K00385 asrC; anaerobic sulfite reductase subunit C D PTH_0690 hypothetical membrane protein K27187 dsrM; [DsrC]-trisulfide reductase subunit M [EC:1.8.5.10] D PTH_0691 hypothetical protein K27188 dsrK; [DsrC]-trisulfide reductase subunit K [EC:1.8.5.10] D PTH_0135 SseA; rhodanese-related sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D PTH_1090 SseA; rhodanese-related sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D PTH_1091 SseA; rhodanese-related sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D PTH_0294 CysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D PTH_0247 CysK; cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D PTH_0250 MET2; homoserine acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:pth00061] D PTH_2216 AccA; acetyl-CoA carboxylase alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D PTH_1175 Acetyl/propionyl-CoA carboxylase, alpha subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D PTH_1190 AccC; biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D PTH_2217 AccD; acetyl-CoA carboxylase beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D PTH_1740 AcpP; acyl carrier protein K02078 acpP; acyl carrier protein D PTH_1743 FabD; (acyl-carrier-protein) S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D PTH_1745 FabH; 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D PTH_1739 FabB; 3-oxoacyl-(acyl-carrier-protein) synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D PTH_1742 FabG; dehydrogenases with different specificities K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D PTH_2770 FabA; 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D PTH_1744 dioxygenases related to 2-nitropropane dioxygenase K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9] D PTH_1376 CaiC; acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D PTH_1890 CaiC; acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:pth00071] D PTH_0270 PaaJ; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D PTH_1376 CaiC; acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D PTH_1890 CaiC; acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D PTH_1584 putative aldehyde/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D PTH_0606 EutG; alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:pth00561] D PTH_1746 PlsX; fatty acid/phospholipid biosynthesis enzyme K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D PTH_1608 predicted membrane protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D PTH_1618 PlsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D PTH_0893 hypothetical membrane protein K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D PTH_1384 RfaG; glycosyltransferase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337] D PTH_1264 MurG; UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315] D PTH_0510 EutG; alcohol dehydrogenase K00086 dhaT; 1,3-propanediol dehydrogenase [EC:1.1.1.202] C 00564 Glycerophospholipid metabolism [PATH:pth00564] D PTH_1607 GpsA; glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D PTH_1608 predicted membrane protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D PTH_1618 PlsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D PTH_0893 hypothetical membrane protein K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D PTH_1370 hypothetical protein K01114 plc; phospholipase C [EC:3.1.4.3] D PTH_0966 UgpQ; glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D PTH_1258 CdsA; CDP-diglyceride synthetase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D PTH_1986 PssA; phosphatidylserine synthase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D PTH_1985 Psd; phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D PTH_1297 PgsA; phosphatidylglycerophosphate synthase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D PTH_0378 FixC; dehydrogenases K17830 GGR; digeranylgeranylglycerophospholipid reductase [EC:1.3.1.101 1.3.7.11] D PTH_2726 hypothetical protein K24872 yvoF; heptaprenylglycerol acetyltransferase [EC:2.3.1.-] C 00565 Ether lipid metabolism D PTH_1370 hypothetical protein K01114 plc; phospholipase C [EC:3.1.4.3] C 00600 Sphingolipid metabolism C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism C 01040 Biosynthesis of unsaturated fatty acids B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:pth00230] D PTH_1329 MutT; NTP pyrophosphohydrolases K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D PTH_1211 DeoB; hosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7] D PTH_0398 ManB; phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D PTH_0105 PrsA; phosphoribosylpyrophosphate synthetase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D PTH_2545 PurF; glutamine phosphoribosylpyrophosphate amidotransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D PTH_2540 PurD; phosphoribosylamine-glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D PTH_2543 PurN; folate-dependent phosphoribosylglycinamide formyltransferase PurN K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D PTH_1430 PurL; phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D PTH_1429 PurL; phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain K23270 purSL; phosphoribosylformylglycinamidine synthase subunit PurSL [EC:6.3.5.3] D PTH_2544 PurM; phosphoribosylaminoimidazole (AIR) synthetase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D PTH_2548 hypothetical protein K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D PTH_2546 PurC; phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D PTH_2547 PurB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D PTH_2541 PurH; AICAR transformylase/IMP cyclohydrolase PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D PTH_1044 Apt; adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D PTH_2332 UshA; 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D PTH_1397 SurE; predicted acid phosphatase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D PTH_1832 uncharacterized conserved protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D PTH_2552 Hpt; hypoxanthine-guanine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D PTH_1318 hypothetical protein K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D PTH_0199 Ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D PTH_0792 xanthosine triphosphate pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D PTH_2551 hypothetical GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D PTH_2319 SsnA; cytosine deaminase and related metal-dependent hydrolases K01487 guaD; guanine deaminase [EC:3.5.4.3] D PTH_2359 SsnA; cytosine deaminase and related metal-dependent hydrolases K01487 guaD; guanine deaminase [EC:3.5.4.3] D PTH_2333 hypothetical protein K01487 guaD; guanine deaminase [EC:3.5.4.3] D PTH_1795 Gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D PTH_1591 NrdA; Ribonucleotide reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D PTH_1842 NrdD; oxygen-sensitive ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D PTH_2154 NrdD; oxygen-sensitive ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D PTH_0905 Dgt; dGTP triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1] D PTH_1045 SpoT; guanosine polyphosphate pyrophosphohydrolases/synthetases K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D PTH_0190 hypothetical protein K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D PTH_2613 hypothetical signal transduction receptor K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1] D PTH_2883 PurA; adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D PTH_2365 UshA; 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases K08693 yfkN; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase / 5'-nucleotidase [EC:3.1.4.16 3.1.3.6 3.1.3.5] D PTH_1304 Uncharacterized protein conserved in bacteria K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16] D PTH_1418 Adk; adenylate kinase and related kinases K00939 adk; adenylate kinase [EC:2.7.4.3] D PTH_0795 Hit; diadenosine tetraphosphate hydrolase and other HIT family hydrolases K19710 E2.7.7.53; ATP adenylyltransferase [EC:2.7.7.53] D PTH_0238 CysC; adenylylsulfate kinase and related kinases K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25] D PTH_0241 MET3; ATP sulfurylase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] C 00240 Pyrimidine metabolism [PATH:pth00240] D PTH_0505 CarB; carbamoylphosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D PTH_1809 CarB; carbamoylphosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D PTH_1810 CarA; carbamoylphosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D PTH_1812 PyrB; aspartate carbamoyltransferase, catalytic chain K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D PTH_1811 PyrC; dihydroorotase and related cyclic amidohydrolases K01465 URA4; dihydroorotase [EC:3.5.2.3] D PTH_1806 PyrD; dihydroorotate dehydrogenase K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14] D PTH_1807 UbiB; 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit D PTH_1804 PyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D PTH_1805 PyrF; orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D PTH_1254 PyrH; uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D PTH_0199 Ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D PTH_0815 Maf; nucleotide-binding protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D PTH_2843 PyrG; CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2] D PTH_1617 Cmk; cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D PTH_2332 UshA; 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D PTH_1397 SurE; predicted acid phosphatase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D PTH_2365 UshA; 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases K08693 yfkN; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase / 5'-nucleotidase [EC:3.1.4.16 3.1.3.6 3.1.3.5] D PTH_1813 PyrR; pyrimidine operon attenuation protein/uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D PTH_1304 Uncharacterized protein conserved in bacteria K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16] D PTH_1212 DeoA; thymidine phosphorylase K00756 pdp; pyrimidine-nucleoside phosphorylase [EC:2.4.2.2] D PTH_0894 Cdd; cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5] D PTH_1842 NrdD; oxygen-sensitive ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D PTH_2154 NrdD; oxygen-sensitive ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D PTH_1591 NrdA; Ribonucleotide reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D PTH_2823 ComEB; deoxycytidylate deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12] D PTH_0062 Tmk; thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D PTH_1279 Dut; dUTPase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D PTH_2153 Dut; dUTPase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D PTH_0298 THY1; predicted alternative thymidylate synthase K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] D PTH_2150 THY1; predicted alternative thymidylate synthase K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:pth00250] D PTH_1798 aspartate/tyrosine/aromatic aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D PTH_1421 aspartate/tyrosine/aromatic aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D PTH_0223 NadB; aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D PTH_1687 asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D PTH_0673 AsnB; asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D PTH_0658 Ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D PTH_0981 AspA; aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1] D PTH_0507 ArgG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D PTH_0517 ArgH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D PTH_2883 PurA; adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D PTH_2547 PurB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D PTH_1812 PyrB; aspartate carbamoyltransferase, catalytic chain K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D PTH_1185 GabT; 4-aminobutyrate aminotransferase and related aminotransferases K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D PTH_0734 GltB; glutamate synthase domain 2 K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D PTH_1181 GltD; NADPH-dependent glutamate synthase beta chain and related oxidoreductases K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D PTH_0735 GltD; NADPH-dependent glutamate synthase beta chain and related oxidoreductases K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D PTH_0050 GdhA; glutamate dehydrogenase/leucine dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D PTH_0733 GlnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PTH_0909 GlnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PTH_2298 GlnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PTH_0731 GlnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PTH_0505 CarB; carbamoylphosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D PTH_1809 CarB; carbamoylphosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D PTH_1810 CarA; carbamoylphosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D PTH_1430 PurL; phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D PTH_0539 GlmS; glucosamine 6-phosphate synthetase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D PTH_2545 PurF; glutamine phosphoribosylpyrophosphate amidotransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:pth00260] D PTH_1599 LysC; aspartokinases K00928 lysC; aspartate kinase [EC:2.7.2.4] D PTH_1287 LysC; aspartokinases K00928 lysC; aspartate kinase [EC:2.7.2.4] D PTH_1286 Asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D PTH_1601 ThrA; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D PTH_1600 ThrB; homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39] D PTH_2670 ThrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D PTH_2824 GlyA; glycine/serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D PTH_2720 GpmI; phosphoglyceromutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D PTH_1598 predicted phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D PTH_0012 SerA; phosphoglycerate dehydrogenase and related dehydrogenases K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D PTH_1315 GpmB; fructose-2,6-bisphosphatase K22305 psp; phosphoserine phosphatase [EC:3.1.3.3] D PTH_1986 PssA; phosphatidylserine synthase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D PTH_0102 IlvA; threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D PTH_1623 TrpA; tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D PTH_1624 TrpB; tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D PTH_0608 predicted alternative tryptophan synthase beta-subunit K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20] C 00270 Cysteine and methionine metabolism [PATH:pth00270] D PTH_0294 CysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D PTH_0247 CysK; cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D PTH_2759 MetK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D PTH_1441 SpeD; S-adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D PTH_0945 SpeE; spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D PTH_1832 uncharacterized conserved protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D PTH_1728 SsnA; cytosine deaminase and related metal-dependent hydrolases K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28] D PTH_1731 Pnp; purine nucleoside phosphorylase K19696 mtiP; 5'-methylthioinosine phosphorylase [EC:2.4.2.44] D PTH_1730 predicted translation initiation factor 2B subunit K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23] D PTH_0926 uncharacterized conserved protein K08966 mtnX; 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase [EC:3.1.3.87] D PTH_1729 SAM1; S-adenosylhomocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D PTH_1599 LysC; aspartokinases K00928 lysC; aspartate kinase [EC:2.7.2.4] D PTH_1287 LysC; aspartokinases K00928 lysC; aspartate kinase [EC:2.7.2.4] D PTH_1286 Asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D PTH_1601 ThrA; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D PTH_1472 uncharacterized conserved protein K23975 E2.8.1.16; L-aspartate semialdehyde sulfurtransferase [EC:2.8.1.16] D PTH_1473 NapF; ferredoxin K23976 K23976; L-aspartate semialdehyde sulfurtransferase ferredoxin D PTH_0250 MET2; homoserine acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D PTH_0253 MET17; O-acetylhomoserine sulfhydrylase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] D PTH_0525 IlvE; branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D PTH_1798 aspartate/tyrosine/aromatic aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D PTH_1421 aspartate/tyrosine/aromatic aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D PTH_0135 SseA; rhodanese-related sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D PTH_1090 SseA; rhodanese-related sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D PTH_1091 SseA; rhodanese-related sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D PTH_0747 Mdh; malate/lactate dehydrogenases K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D PTH_1367 MmcK; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D PTH_2596 CysK; cysteine synthase K12339 cysM; S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) [EC:2.5.1.144] D PTH_0012 SerA; phosphoglycerate dehydrogenase and related dehydrogenases K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] C 00280 Valine, leucine and isoleucine degradation [PATH:pth00280] D PTH_0525 IlvE; branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D PTH_1363 MmcG; methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D PTH_1362 MmcF; methylmalonyl-CoA mutase, C-terminal domain/subunit K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2] D PTH_1361 MmcE; methylmalonyl-CoA mutase, N-terminal domain/subunit K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2] D PTH_1185 GabT; 4-aminobutyrate aminotransferase and related aminotransferases K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D PTH_0270 PaaJ; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:pth00290] D PTH_0102 IlvA; threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D PTH_0532 LeuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D PTH_2519 LeuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D PTH_0533 LeuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D PTH_2518 LeuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D PTH_0534 LeuB; isocitrate/isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D PTH_0527 IlvB; thiamine pyrophosphate-requiring enzymes K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D PTH_0530 IlvB; thiamine pyrophosphate-requiring enzymes K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D PTH_0528 IlvH; acetolactate synthase K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D PTH_0736 IlvH; acetolactate synthase, small (regulatory) subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D PTH_0529 IlvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D PTH_0526 IlvD; dihydroxyacid dehydratase/phosphogluconate dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D PTH_0525 IlvE; branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D PTH_0531 LeuA; isopropylmalate/homocitrate/citramalate synthases K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D PTH_0535 LeuA; isopropylmalate/homocitrate/citramalate synthases K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:pth00300] D PTH_1601 ThrA; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D PTH_1599 LysC; aspartokinases K00928 lysC; aspartate kinase [EC:2.7.2.4] D PTH_1287 LysC; aspartokinases K00928 lysC; aspartate kinase [EC:2.7.2.4] D PTH_1286 Asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D PTH_1288 DapA; dihydrodipicolinate synthase/N-acetylneuraminate lyase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D PTH_1283 DapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D PTH_0504 ArgD; ornithine/acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D PTH_1800 DapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D PTH_1799 aspartate/tyrosine/aromatic aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83] D PTH_1308 aspartate/tyrosine/aromatic aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83] D PTH_1235 LysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D PTH_1866 MurE; UDP-N-acetylmuramyl tripeptide synthase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D PTH_1865 MurF; UDP-N-acetylmuramyl pentapeptide synthase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:pth00310] D PTH_0270 PaaJ; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D PTH_1726 ArgD; ornithine/acetylornithine aminotransferase K09251 patA; putrescine aminotransferase [EC:2.6.1.82] D PTH_1185 GabT; 4-aminobutyrate aminotransferase and related aminotransferases K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D PTH_0268 AtoD; acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9] D PTH_0269 AtoA; acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9] C 00220 Arginine biosynthesis [PATH:pth00220] D PTH_0506 ArgF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D PTH_0507 ArgG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D PTH_0517 ArgH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D PTH_1186 DUR1; allophanate hydrolase subunit 1 K01941 uca; urea carboxylase [EC:6.3.4.6] D PTH_1430 PurL; phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D PTH_0733 GlnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PTH_0909 GlnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PTH_2298 GlnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PTH_0731 GlnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PTH_0505 CarB; carbamoylphosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D PTH_1809 CarB; carbamoylphosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D PTH_1810 CarA; carbamoylphosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D PTH_0050 GdhA; glutamate dehydrogenase/leucine dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D PTH_1798 aspartate/tyrosine/aromatic aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D PTH_1421 aspartate/tyrosine/aromatic aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D PTH_1062 ArgA; N-acetylglutamate synthase and related acetyltransferases K00619 argA; amino-acid N-acetyltransferase [EC:2.3.1.1] D PTH_0502 ArgJ; N-acetylglutamate synthase K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] D PTH_0503 ArgB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D PTH_0501 ArgC; acetylglutamate semialdehyde dehydrogenase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D PTH_0504 ArgD; ornithine/acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] C 00330 Arginine and proline metabolism [PATH:pth00330] D PTH_2005 LdcC; arginine/lysine/ornithine decarboxylases K01585 speA; arginine decarboxylase [EC:4.1.1.19] D PTH_0944 uncharacterized conserved protein K02626 pdaD; arginine decarboxylase [EC:4.1.1.19] D PTH_0946 SpeB; arginase/agmatinase/formimionoglutamate hydrolase K01480 speB; agmatinase [EC:3.5.3.11] D PTH_0945 SpeE; spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D PTH_1441 SpeD; S-adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D PTH_1726 ArgD; ornithine/acetylornithine aminotransferase K09251 patA; putrescine aminotransferase [EC:2.6.1.82] D PTH_1826 ProC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D PTH_0834 ProB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D PTH_2594 ProA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] D PTH_1798 aspartate/tyrosine/aromatic aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D PTH_1421 aspartate/tyrosine/aromatic aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] C 00340 Histidine metabolism [PATH:pth00340] D PTH_0960 HisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D PTH_2530 HisI; phosphoribosyl-ATP pyrophosphohydrolase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31] D PTH_2533 HisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] D PTH_2535 HisH; glutamine amidotransferase K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D PTH_2532 HisF; imidazoleglycerol-phosphate synthase K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D PTH_2536 HisB; imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] D PTH_2537 HisC; histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D PTH_1872 HIS2; histidinol phosphatase and related hydrolases of the PHP family K04486 E3.1.3.15B; histidinol-phosphatase (PHP family) [EC:3.1.3.15] D PTH_1680 HisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] D PTH_2538 HisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] C 00350 Tyrosine metabolism [PATH:pth00350] D PTH_1798 aspartate/tyrosine/aromatic aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D PTH_1421 aspartate/tyrosine/aromatic aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D PTH_2537 HisC; histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D PTH_1584 putative aldehyde/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D PTH_0606 EutG; alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] C 00360 Phenylalanine metabolism [PATH:pth00360] D PTH_1662 PaaK; coenzyme F390 synthetase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30] D PTH_2847 PaaK; coenzyme F390 synthetase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30] D PTH_0472 PaaK; coenzyme F390 synthetase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30] D PTH_1022 PaaI; Uncharacterized protein K02614 paaI; acyl-CoA thioesterase [EC:3.1.2.-] D PTH_0794 CaiD; enoyl-CoA hydratase/carnithine racemase K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18] D PTH_0272 FadB; 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D PTH_1798 aspartate/tyrosine/aromatic aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D PTH_1421 aspartate/tyrosine/aromatic aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D PTH_2537 HisC; histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D PTH_0481 2-keto-4-pentenoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80] D PTH_0483 LeuA; isopropylmalate/homocitrate/citramalate synthases K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39] D PTH_0482 MhpF; acetaldehydede hydrogenase K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10] C 00380 Tryptophan metabolism D PTH_0270 PaaJ; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:pth00400] D PTH_1622 AroA; 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D PTH_0519 AroA; 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D PTH_1132 AroB; 3-dehydroquinate synthetase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D PTH_1160 AroQ; 3-dehydroquinate dehydratase II K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D PTH_1129 AroE; shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D PTH_1131 AroK; shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D PTH_1620 AroA; 5-enolpyruvylshikimate-3-phosphate synthase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D PTH_1130 AroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D PTH_1628 TrpE; anthranilate/para-aminobenzoate synthases component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D PTH_1626 TrpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D PTH_0623 TrpF; phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24] D PTH_1625 TrpC; indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48] D PTH_1623 TrpA; tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D PTH_1624 TrpB; tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D PTH_0608 predicted alternative tryptophan synthase beta-subunit K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D PTH_1630 AroH; chorismate mutase K06208 aroH; chorismate mutase [EC:5.4.99.5] D PTH_1602 PheB; ACT domain-containing protein K06209 pheB; chorismate mutase [EC:5.4.99.5] D PTH_1621 TyrA; prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D PTH_0518 PheA; prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51] D PTH_1798 aspartate/tyrosine/aromatic aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D PTH_1421 aspartate/tyrosine/aromatic aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D PTH_2537 HisC; histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:pth00410] D PTH_0222 PanD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D PTH_1185 GabT; 4-aminobutyrate aminotransferase and related aminotransferases K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D PTH_0221 PanC; panthothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] C 00430 Taurine and hypotaurine metabolism D PTH_0658 Ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] C 00440 Phosphonate and phosphinate metabolism C 00450 Selenocompound metabolism [PATH:pth00450] D PTH_1417 TrxB; thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D PTH_0962 TrxB; thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D PTH_0241 MET3; ATP sulfurylase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] D PTH_1848 SelD; selenophosphate synthase K01008 selD; selenide, water dikinase [EC:2.7.9.3] D PTH_1428 SelA; selenocysteine synthase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] D PTH_0069 MetG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:pth00460] D PTH_1687 asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D PTH_2824 GlyA; glycine/serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:pth00470] D PTH_0660 Alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D PTH_1390 DdlA; D-alanine-D-alanine ligase and related ATP-grasp enzymes K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D PTH_1430 PurL; phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D PTH_0922 MurI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D PTH_0787 MurI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D PTH_1863 MurD; UDP-N-acetylmuramoylalanine-D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D PTH_1800 DapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D PTH_1235 LysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] C 00480 Glutathione metabolism [PATH:pth00480] D PTH_1188 Uncharacterized proteins, homologs of lactam utilization protein B K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9] D PTH_1187 hypothetical protein K23124 pxpC; 5-oxoprolinase (ATP-hydrolysing) subunit C [EC:3.5.2.9] D PTH_0945 SpeE; spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation C 00540 Lipopolysaccharide biosynthesis C 00542 O-Antigen repeat unit biosynthesis [PATH:pth00542] D PTH_2769 Rfe; UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:pth00541] D PTH_2768 GalU; UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D PTH_2767 WcaG; nucleoside-diphosphate-sugar epimerases K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D PTH_0441 GalE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D PTH_1101 WcaG; nucleoside-diphosphate-sugar epimerases K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D PTH_2579 RfbA; dTDP-glucose pyrophosphorylase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D PTH_1078 RfbA; dTDP-glucose pyrophosphorylase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D PTH_2578 RfbB; dTDP-D-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D PTH_1081 RfbB; dTDP-D-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D PTH_1079 RfbC; dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D PTH_2577 RfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D PTH_1080 RfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D PTH_1115 WecE; predicted pyridoxal phosphate-dependent enzyme K13010 per; perosamine synthetase [EC:2.6.1.102] D PTH_0104 GlmU; N-acetylglucosamine-1-phosphate uridyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D PTH_2821 WecB; UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D PTH_1076 WecC; UDP-N-acetyl-D-mannosaminuronate dehydrogenase K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136] D PTH_1113 MviM; predicted dehydrogenases and related proteins K13020 wlbA; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335] D PTH_0380 carbonic anhydrases/acetyltransferases K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201] D PTH_0384 WecB; UDP-N-acetylglucosamine 2-epimerase K13019 wbpI; UDP-GlcNAc3NAcA epimerase [EC:5.1.3.23] D PTH_1103 WecB; UDP-N-acetylglucosamine 2-epimerase K13019 wbpI; UDP-GlcNAc3NAcA epimerase [EC:5.1.3.23] C 00550 Peptidoglycan biosynthesis [PATH:pth00550] D PTH_2858 MurA; UDP-N-acetylglucosamine enolpyruvyl transferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D PTH_1858 MurA; UDP-N-acetylglucosamine enolpyruvyl transferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D PTH_1859 MurB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D PTH_1860 MurC; UDP-N-acetylmuramate-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D PTH_1863 MurD; UDP-N-acetylmuramoylalanine-D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D PTH_1866 MurE; UDP-N-acetylmuramyl tripeptide synthase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D PTH_1390 DdlA; D-alanine-D-alanine ligase and related ATP-grasp enzymes K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D PTH_1865 MurF; UDP-N-acetylmuramyl pentapeptide synthase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D PTH_1257 UppS; undecaprenyl pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D PTH_1292 BacA; Uncharacterized bacitracin resistance protein K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D PTH_1864 Rfe; UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D PTH_1861 MurG; UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D PTH_1935 MrcB; membrane carboxypeptidase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D PTH_1013 MrcB; membrane carboxypeptidase K21464 pbpG; penicillin-binding protein 2D [EC:2.4.99.28 3.4.16.4] D PTH_0820 FtsI; cell division protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D PTH_1070 FtsI; cell division protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D PTH_1867 FtsI; cell division protein FtsI/penicillin-binding protein 2 K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein) D PTH_1782 FtsI; cell division protein FtsI/penicillin-binding protein 2 K05364 pbpA; penicillin-binding protein A D PTH_1223 DacC; D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D PTH_1277 DacC; D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D PTH_1876 DacC; D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D PTH_1968 DacC; D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D PTH_1650 MurE; UDP-N-acetylmuramyl tripeptide synthase K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13] D PTH_1649 predicted glutamine amidotransferase K07009 gatD; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13] C 00552 Teichoic acid biosynthesis [PATH:pth00552] D PTH_1292 BacA; Uncharacterized bacitracin resistance protein K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D PTH_2769 Rfe; UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D PTH_2780 WecG; teichoic acid biosynthesis proteins K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187] D PTH_2776 LytR; transcriptional regulator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-] D PTH_1264 MurG; UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315] D PTH_1384 RfaG; glycosyltransferase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:pth00543] D PTH_2769 Rfe; UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D PTH_1214 DltB; predicted membrane protein K19294 algI; alginate O-acetyltransferase complex protein AlgI D PTH_1089 DltB; predicted membrane protein K19294 algI; alginate O-acetyltransferase complex protein AlgI D PTH_0294 CysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:pth00730] D PTH_0644 ThiC; thiamine biosynthesis protein K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17] D PTH_0925 ThiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D PTH_0642 predicted dinucleotide-utilizing enzyme K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73] D PTH_0228 NifS; cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D PTH_1054 NifS; cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D PTH_0641 ThiH; thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19] D PTH_0984 ThiH; thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19] D PTH_1196 Dxs; deoxyxylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D PTH_0640 ThiG; Uncharacterized enzyme K03149 thiG; thiazole synthase [EC:2.8.1.10] D PTH_0643 ThiE; thiamine monophosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D PTH_1780 predicted GTPase K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D PTH_0604 THI80; thiamine pyrophosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2] D PTH_1418 Adk; adenylate kinase and related kinases K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:pth00740] D PTH_1759 GTP cyclohydrolase II and 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D PTH_1761 pyrimidine reductase and Pyrimidine deaminase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D PTH_1758 RibH; riboflavin synthase beta chain K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D PTH_1760 RibC; riboflavin synthase alpha chain K00793 ribE; riboflavin synthase [EC:2.5.1.9] D PTH_1273 RibF; FAD synthase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D PTH_1329 MutT; NTP pyrophosphohydrolases K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D PTH_0896 UbiX; 3-polyprenyl-4-hydroxybenzoate decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00750 Vitamin B6 metabolism [PATH:pth00750] D PTH_2670 ThrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D PTH_0009 SNZ1; pyridoxine biosynthesis enzyme K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6] D PTH_0010 PDX2; predicted glutamine amidotransferase K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6] C 00760 Nicotinate and nicotinamide metabolism [PATH:pth00760] D PTH_0223 NadB; aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D PTH_0229 NadA; quinolinate synthase K03517 nadA; quinolinate synthase [EC:2.5.1.72] D PTH_0480 NadC; nicotinate-nucleotide pyrophosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] D PTH_0226 NadC; nicotinate-nucleotide pyrophosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] D PTH_1651 PncB; nicotinic acid phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D PTH_2332 UshA; 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D PTH_1397 SurE; predicted acid phosphatase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D PTH_2365 UshA; 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases K08693 yfkN; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase / 5'-nucleotidase [EC:3.1.4.16 3.1.3.6 3.1.3.5] D PTH_0835 NadD; nicotinic acid mononucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D PTH_0918 hypothetical protein K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1] D PTH_2664 SIR2; NAD-dependent protein deacetylases K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313] D PTH_1198 predicted sugar kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] C 00770 Pantothenate and CoA biosynthesis [PATH:pth00770] D PTH_0527 IlvB; thiamine pyrophosphate-requiring enzymes K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D PTH_0530 IlvB; thiamine pyrophosphate-requiring enzymes K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D PTH_0528 IlvH; acetolactate synthase K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D PTH_0736 IlvH; acetolactate synthase, small (regulatory) subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D PTH_0529 IlvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D PTH_0526 IlvD; dihydroxyacid dehydratase/phosphogluconate dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D PTH_0220 PanB; ketopantoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D PTH_0221 PanC; panthothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D PTH_0258 putative transcriptional regulator K03525 coaX; type III pantothenate kinase [EC:2.7.1.33] D PTH_1793 Dfp; phosphopantothenoylcysteine synthetase/decarboxylase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D PTH_1753 CoaD; phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D PTH_1763 CoaD; phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D PTH_1979 CoaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D PTH_0656 AcpS; phosphopantetheinyl transferase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D PTH_0525 IlvE; branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D PTH_0222 PanD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] C 00780 Biotin metabolism [PATH:pth00780] D PTH_1739 FabB; 3-oxoacyl-(acyl-carrier-protein) synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D PTH_1742 FabG; dehydrogenases with different specificities K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D PTH_2770 FabA; 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D PTH_0983 BioB; biotin synthase and related enzymes K01012 bioB; biotin synthase [EC:2.8.1.6] D PTH_0249 BioB; biotin synthase and related enzymes K01012 bioB; biotin synthase [EC:2.8.1.6] D PTH_0521 BioB; biotin synthase and related enzymes K01012 bioB; biotin synthase [EC:2.8.1.6] D PTH_0255 BirA; biotin-(acetyl-CoA carboxylase) ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism C 00790 Folate biosynthesis [PATH:pth00790] D PTH_1399 FolE; GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16] D PTH_0204 FolB; dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D PTH_0205 FolK; 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D PTH_0203 hypothetical membrane protein K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D PTH_0813 FolC; folylpolyglutamate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D PTH_1759 GTP cyclohydrolase II and 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D PTH_1627 PabA; anthranilate/para-aminobenzoate synthases component II K01664 pabA; para-aminobenzoate synthetase component II [EC:2.6.1.85] D PTH_1403 6-pyruvoyl-tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D PTH_1400 NrdG; organic radical activating enzymes K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D PTH_1402 predicted PP-loop superfamily ATPase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D PTH_0622 predicted archaeal sugar kinases K06984 K06984; beta-ribofuranosylaminobenzene 5'-phosphate synthase [EC:2.4.2.54] D PTH_2623 MoaA; molybdenum cofactor biosynthesis enzyme K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D PTH_2609 MoaC; molybdenum cofactor biosynthesis enzyme K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D PTH_2617 MoeA; molybdopterin biosynthesis enzyme K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D PTH_2616 molybdopterin biosynthesis enzyme K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D PTH_1532 Uncharacterized MobA-related protein K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76] D PTH_0687 hypothetical protein K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76] D PTH_1127 MobA; molybdopterin-guanine dinucleotide biosynthesis protein A K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77] C 00670 One carbon pool by folate [PATH:pth00670] D PTH_0200 MIS1; formyltetrahydrofolate synthetase K00288 MTHFD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase / formyltetrahydrofolate synthetase [EC:1.5.1.5 3.5.4.9 6.3.4.3] D PTH_1183 FolD; 5,10-methylene-tetrahydrofolate dehydrogenase/methenyl tetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D PTH_1184 methenyl tetrahydrofolate cyclohydrolase K01500 fchA; methenyltetrahydrofolate cyclohydrolase [EC:3.5.4.9] D PTH_2824 GlyA; glycine/serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D PTH_2543 PurN; folate-dependent phosphoribosylglycinamide formyltransferase PurN K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D PTH_2541 PurH; AICAR transformylase/IMP cyclohydrolase PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D PTH_1790 Fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D PTH_0298 THY1; predicted alternative thymidylate synthase K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] D PTH_2150 THY1; predicted alternative thymidylate synthase K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] D PTH_1006 MetF; 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D PTH_2652 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:pth00860] D PTH_0971 HemA; glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70] D PTH_0979 HemL; glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D PTH_0975 HemB; delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D PTH_0972 HemC; porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D PTH_0973 uroporphyrinogen-III methylase and Uroporphyrinogen-III synthase K13542 cobA-hemD; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75] D PTH_0970 CysG; siroheme synthase K24866 sirC; precorrin-2 dehydrogenase [EC:1.3.1.76] D PTH_0977 Lrp; transcriptional regulator K22225 ahbAB; siroheme decarboxylase [EC:4.1.1.111] D PTH_0978 Lrp; transcriptional regulator K22225 ahbAB; siroheme decarboxylase [EC:4.1.1.111] D PTH_0974 predicted Fe-S oxidoreductases K22226 ahbC; Fe-coproporphyrin III synthase D PTH_0976 predicted Fe-S oxidoreductases K22227 ahbD; AdoMet-dependent heme synthase [EC:1.3.98.6] D PTH_0953 CobF; precorrin-2 methylase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151] D PTH_0954 CobM; precorrin-4 methylase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271] D PTH_0955 CbiG; cobalamin biosynthesis protein CbiG K02189 cbiG; cobalt-precorrin 5A hydrolase [EC:3.7.1.12] D PTH_0951 cobalamin biosynthesis protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein D PTH_0952 precorrin-6B methylase 1,2 K00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase / cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196] D PTH_0957 CobH; precorrin isomerase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60] D PTH_0959 CobB; cobyrinic acid a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11] D PTH_1324 BtuR; ATP:corrinoid adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D PTH_0071 BtuR; ATP:corrinoid adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D PTH_0958 CobQ; cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10] D PTH_1312 CbiB; cobalamin biosynthesis protein CobD/CbiB K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10] D PTH_1477 uncharacterized conserved protein K08260 cbiZ; adenosylcobinamide hydrolase [EC:3.5.1.90] D PTH_1311 CobU; adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62] D PTH_1313 CobS; cobalamin-5-phosphate synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26] D PTH_0931 CobT; NaMN:DMB phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21] D PTH_1314 HisC; histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase K04720 cobD; threonine-phosphate decarboxylase [EC:4.1.1.81] D PTH_0629 Bfr; bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:pth00130] D PTH_1437 UbiA; 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D PTH_1438 UbiD; 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98] D PTH_0896 UbiX; 3-polyprenyl-4-hydroxybenzoate decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D PTH_1439 UbiE; methylase involved in ubiquinone/menaquinone biosynthesis K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D PTH_1436 predicted periplasmic solute-binding protein K11782 mqnA; chorismate dehydratase [EC:4.2.1.151] D PTH_0208 predicted periplasmic solute-binding protein K11782 mqnA; chorismate dehydratase [EC:4.2.1.151] D PTH_0209 ThiH; thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes K18285 mqnE; aminodeoxyfutalosine synthase [EC:2.5.1.120] D PTH_0207 ThiH; thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes K11784 mqnC; cyclic dehypoxanthinyl futalosine synthase [EC:1.21.98.1] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:pth00900] D PTH_1196 Dxs; deoxyxylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D PTH_1260 Dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D PTH_0289 IspD; 4-diphosphocytidyl-2-methyl-D-erithritol synthase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] D PTH_0096 IspE; 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D PTH_0290 IspF; 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] D PTH_1262 GcpE; predicted enzyme K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D PTH_1619 hypothetical protein K02945 RP-S1; small subunit ribosomal protein S1 D PTH_0270 PaaJ; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D PTH_0896 UbiX; 3-polyprenyl-4-hydroxybenzoate decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D PTH_1194 IspA; geranylgeranyl pyrophosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D PTH_0969 IspA; geranylgeranyl pyrophosphate synthase K24873 hepT; heptaprenyl diphosphate synthase component 2 [EC:2.5.1.30] D PTH_1440 hypothetical protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D PTH_1257 UppS; undecaprenyl pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation C 00907 Pinene, camphor and geraniol degradation C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D PTH_2750 transketolase, N-terminal subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D PTH_2749 transketolase, C-terminal subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis [PATH:pth00523] D PTH_2579 RfbA; dTDP-glucose pyrophosphorylase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D PTH_1078 RfbA; dTDP-glucose pyrophosphorylase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D PTH_2578 RfbB; dTDP-D-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D PTH_1081 RfbB; dTDP-D-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D PTH_1079 RfbC; dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D PTH_2577 RfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D PTH_1080 RfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides C 01055 Biosynthesis of vancomycin group antibiotics D PTH_2578 RfbB; dTDP-D-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D PTH_1081 RfbB; dTDP-D-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis C 00332 Carbapenem biosynthesis [PATH:pth00332] D PTH_0834 ProB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D PTH_2594 ProA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00261 Monobactam biosynthesis [PATH:pth00261] D PTH_0241 MET3; ATP sulfurylase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] D PTH_1599 LysC; aspartokinases K00928 lysC; aspartate kinase [EC:2.7.2.4] D PTH_1287 LysC; aspartokinases K00928 lysC; aspartate kinase [EC:2.7.2.4] D PTH_1286 Asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D PTH_1288 DapA; dihydrodipicolinate synthase/N-acetylneuraminate lyase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D PTH_1283 DapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:pth00521] D PTH_2734 NagC; transcriptional regulator/sugar kinase K25026 glk; glucokinase [EC:2.7.1.2] D PTH_0398 ManB; phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D PTH_2579 RfbA; dTDP-glucose pyrophosphorylase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D PTH_1078 RfbA; dTDP-glucose pyrophosphorylase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D PTH_2578 RfbB; dTDP-D-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D PTH_1081 RfbB; dTDP-D-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D PTH_1079 RfbC; dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D PTH_2577 RfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D PTH_1080 RfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 00524 Neomycin, kanamycin and gentamicin biosynthesis D PTH_2734 NagC; transcriptional regulator/sugar kinase K25026 glk; glucokinase [EC:2.7.1.2] C 00525 Acarbose and validamycin biosynthesis [PATH:pth00525] D PTH_2579 RfbA; dTDP-glucose pyrophosphorylase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D PTH_1078 RfbA; dTDP-glucose pyrophosphorylase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D PTH_2578 RfbB; dTDP-D-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D PTH_1081 RfbB; dTDP-D-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis [PATH:pth00401] D PTH_1621 TyrA; prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D PTH_1798 aspartate/tyrosine/aromatic aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D PTH_1421 aspartate/tyrosine/aromatic aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D PTH_2537 HisC; histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis D PTH_1628 TrpE; anthranilate/para-aminobenzoate synthases component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis D PTH_1743 FabD; (acyl-carrier-protein) S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D PTH_1742 FabG; dehydrogenases with different specificities K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D PTH_1740 AcpP; acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites [PATH:pth00999] D PTH_2759 MetK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D PTH_1129 AroE; shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:pth00362] D PTH_0481 2-keto-4-pentenoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80] D PTH_0483 LeuA; isopropylmalate/homocitrate/citramalate synthases K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39] D PTH_0482 MhpF; acetaldehydede hydrogenase K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10] D PTH_1705 Uncharacterized protein, 4-oxalocrotonate tautomerase homolog K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D PTH_1366 MmcJ; methylmalonyl-CoA decarboxylase, gamma subunit K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma D PTH_0272 FadB; 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D PTH_0270 PaaJ; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00627 Aminobenzoate degradation [PATH:pth00627] D PTH_1653 AcyP; acylphosphatases K01512 acyP; acylphosphatase [EC:3.6.1.7] D PTH_0896 UbiX; 3-polyprenyl-4-hydroxybenzoate decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D PTH_0268 AtoD; acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9] D PTH_0269 AtoA; acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9] C 00364 Fluorobenzoate degradation C 00625 Chloroalkane and chloroalkene degradation [PATH:pth00625] D PTH_0606 EutG; alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D PTH_1584 putative aldehyde/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] C 00361 Chlorocyclohexane and chlorobenzene degradation C 00623 Toluene degradation C 00622 Xylene degradation [PATH:pth00622] D PTH_1705 Uncharacterized protein, 4-oxalocrotonate tautomerase homolog K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D PTH_0481 2-keto-4-pentenoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80] D PTH_0483 LeuA; isopropylmalate/homocitrate/citramalate synthases K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39] D PTH_0482 MhpF; acetaldehydede hydrogenase K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10] C 00633 Nitrotoluene degradation [PATH:pth00633] D PTH_1702 HyaB; Ni,Fe-hydrogenase I large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6] D PTH_1701 HyaA; Ni,Fe-hydrogenase I small subunit K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6] D PTH_0486 HycB; Fe-S-cluster K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit D PTH_0609 HycB; Fe-S-cluster-containing hydrogenase components 2 K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit C 00642 Ethylbenzene degradation C 00643 Styrene degradation [PATH:pth00643] D PTH_2043 AtoD; acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit K01039 gctA; glutaconate CoA-transferase, subunit A [EC:2.8.3.12] D PTH_2044 AtoD; acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit K01039 gctA; glutaconate CoA-transferase, subunit A [EC:2.8.3.12] D PTH_2042 AtoA; acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit K01040 gctB; glutaconate CoA-transferase, subunit B [EC:2.8.3.12] D PTH_2045 AtoA; acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit K01040 gctB; glutaconate CoA-transferase, subunit B [EC:2.8.3.12] D PTH_0512 acyl CoA:acetate/3-ketoacid CoA transferase K01026 pct; propionate CoA-transferase [EC:2.8.3.1] D PTH_1541 acyl CoA:acetate/3-ketoacid CoA transferase K01026 pct; propionate CoA-transferase [EC:2.8.3.1] D PTH_1577 acylCoA:acetate/3-ketoacidCoAtransferase K01026 pct; propionate CoA-transferase [EC:2.8.3.1] D PTH_2429 hypothetical Acyl CoA transferase K01026 pct; propionate CoA-transferase [EC:2.8.3.1] D PTH_1771 acyl CoA:acetate/3-ketoacid CoA transferase K01026 pct; propionate CoA-transferase [EC:2.8.3.1] C 00791 Atrazine degradation D PTH_1186 DUR1; allophanate hydrolase subunit 1 K01941 uca; urea carboxylase [EC:6.3.4.6] C 00930 Caprolactam degradation C 00363 Bisphenol degradation C 00621 Dioxin degradation [PATH:pth00621] D PTH_1705 Uncharacterized protein, 4-oxalocrotonate tautomerase homolog K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D PTH_0481 2-keto-4-pentenoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80] D PTH_0483 LeuA; isopropylmalate/homocitrate/citramalate synthases K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39] D PTH_0482 MhpF; acetaldehydede hydrogenase K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10] C 00626 Naphthalene degradation [PATH:pth00626] D PTH_0606 EutG; alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D PTH_1584 putative aldehyde/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation D PTH_0496 UbiD; 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases K16874 hmfF; 2,5-furandicarboxylate decarboxylase 1 C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:pth03020] D PTH_0312 RpoB; DNA-directed RNA polymerase, beta subunit/140 kD subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D PTH_0313 RpoC; DNA-directed RNA polymerase, beta' subunit/160 kD subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D PTH_0349 RpoA; DNA-directed RNA polymerase, alpha subunit/40 kD subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D PTH_1794 RpoZ; DNA-directed RNA polymerase, subunit K/omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:pth03010] D PTH_1619 hypothetical protein K02945 RP-S1; small subunit ribosomal protein S1 D PTH_2479 hypothetical RNA-binding protein K02945 RP-S1; small subunit ribosomal protein S1 D PTH_1252 RpsB; ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D PTH_0326 RpsC; ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D PTH_0347 RpsD; ribosomal protein S4 and related proteins K02986 RP-S4; small subunit ribosomal protein S4 D PTH_0336 RpsE; ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D PTH_2892 RpsF; ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D PTH_0316 RpsG; ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D PTH_0333 RpsH; ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D PTH_0357 RpsI; ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D PTH_0319 RpsJ; ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D PTH_0346 RpsK; ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D PTH_0315 RpsL; ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D PTH_0345 RpsM; ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D PTH_1274 RpsO; ribosomal protein S15P/S13E K02956 RP-S15; small subunit ribosomal protein S15 D PTH_1723 RpsP; ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D PTH_0329 RpsQ; ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D PTH_2890 RpsR; ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D PTH_0324 RpsS; ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D PTH_0869 RpsT; ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D PTH_0307 RplA; ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D PTH_0323 RplB; ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D PTH_0320 RplC; ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D PTH_0321 RplD; ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D PTH_0332 RplE; ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D PTH_0334 RplF; ribosomal protein L6P/L9E K02933 RP-L6; large subunit ribosomal protein L6 D PTH_0309 RplL; ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D PTH_2887 RplI; ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D PTH_0308 RplJ; ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D PTH_0306 RplK; ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D PTH_0356 RplM; ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D PTH_0330 RplN; ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D PTH_0338 RplO; ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D PTH_0327 RplP; ribosomal protein L16/L10E K02878 RP-L16; large subunit ribosomal protein L16 D PTH_0350 RplQ; ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D PTH_0335 RplR; ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D PTH_1718 RplS; ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D PTH_1953 RplT; ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D PTH_0830 RplU; ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D PTH_0325 RplV; ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D PTH_0322 RplW; ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D PTH_0331 RplX; ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D PTH_0112 RplY; ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D PTH_0831 RpmA; ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D PTH_0328 RpmC; ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D PTH_0337 RpmD; ribosomal protein L30/L7E K02907 RP-L30; large subunit ribosomal protein L30 D PTH_2832 RpmE; ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D PTH_0303 RpmG; ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D PTH_1954 RpmI; ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D PTH_0344 RpmJ; ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D PTH_0314 RPL8A; ribosomal protein HS6-type K07590 RP-L7A; large subunit ribosomal protein L7A D PTH_r004 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D PTH_r001 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D PTH_r002 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D PTH_r005 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D PTH_r006 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D PTH_r003 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:pth00970] D PTH_t041 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D PTH_t022 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D PTH_t008 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D PTH_t027 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D PTH_t020 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D PTH_t004 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D PTH_t003 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D PTH_t015 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D PTH_t023 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D PTH_t009 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D PTH_t028 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D PTH_t031 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D PTH_t035 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D PTH_t017 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D PTH_t050 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D PTH_t025 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D PTH_t030 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D PTH_t042 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D PTH_t021 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D PTH_t049 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D PTH_t016 tRNA-His K14226 tRNA-His; tRNA His D PTH_t007 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D PTH_t043 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D PTH_t019 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D PTH_t045 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D PTH_t033 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D PTH_t046 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D PTH_t018 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D PTH_t051 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D PTH_t034 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D PTH_t014 tRNA-Met K14230 tRNA-Met; tRNA Met D PTH_t012 tRNA-Met K14230 tRNA-Met; tRNA Met D PTH_t024 tRNA-Met K14230 tRNA-Met; tRNA Met D PTH_t029 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D PTH_t036 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D PTH_t040 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D PTH_t039 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D PTH_t005 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D PTH_t006 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D PTH_t001 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D PTH_t002 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D PTH_t013 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D PTH_t010 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D PTH_t048 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D PTH_t037 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D PTH_t011 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D PTH_t026 tRNA-Val K14237 tRNA-Val; tRNA Val D PTH_t047 tRNA-Val K14237 tRNA-Val; tRNA Val D PTH_t044 tRNA-Val K14237 tRNA-Val; tRNA Val D PTH_t032 tRNA-Sec K14238 tRNA-Sec; tRNA Sec D PTH_0293 GlnS; glutamyl- and glutaminyl-tRNA synthetases K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24] D PTH_2522 GatA; asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D PTH_2521 GatB; asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D PTH_2523 GatC; asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D PTH_2867 GlnS; glutamyl- and glutaminyl-tRNA synthetases K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D PTH_1060 AlaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D PTH_1061 AlaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D PTH_1049 AspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D PTH_1420 AsnS; aspartyl/asparaginyl-tRNA synthetases K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D PTH_0899 GlyQ; glycyl-tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D PTH_0900 GlyS; glycyl-tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D PTH_1956 ThrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D PTH_0013 SerS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D PTH_1428 SelA; selenocysteine synthase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] D PTH_0295 CysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D PTH_0069 MetG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D PTH_1790 Fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D PTH_0812 ValS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D PTH_0839 LeuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D PTH_1820 IleS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D PTH_0263 LysU; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D PTH_2844 ArgS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D PTH_1263 ProS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D PTH_1048 HisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D PTH_1950 PheS; phenylalanyl-tRNA synthetase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D PTH_1949 PheT; phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D PTH_1020 TyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D PTH_1238 TrpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:pth03060] D PTH_0340 SecY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D PTH_0304 hypothetical membrane protein K03073 secE; preprotein translocase subunit SecE D PTH_2717 hypothetical membrane protein K03075 secG; preprotein translocase subunit SecG D PTH_1035 SecD; preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D PTH_1036 SecF; preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D PTH_1033 YajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D PTH_2919 YidC; preprotein translocase subunit YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D PTH_2753 SecA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D PTH_1724 Ffh; signal recognition particle GTPase K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D PTH_1737 FtsY; signal recognition particle GTPase K03110 ftsY; fused signal recognition particle receptor D PTH_1715 TatA; Sec-independent protein secretion pathway components K03116 tatA; sec-independent protein translocase protein TatA D PTH_1709 TatA; Sec-independent protein secretion pathway components K03116 tatA; sec-independent protein translocase protein TatA D PTH_1710 TatC; Sec-independent protein secretion pathway component TatC K03118 tatC; sec-independent protein translocase protein TatC D PTH_1717 LepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D PTH_1819 LspA; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:pth04122] D PTH_0228 NifS; cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D PTH_1054 NifS; cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D PTH_0135 SseA; rhodanese-related sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D PTH_1090 SseA; rhodanese-related sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D PTH_1091 SseA; rhodanese-related sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D PTH_1735 SirA; predicted redox protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D PTH_0551 SirA; predicted redox protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D PTH_1056 TrmU; predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D PTH_2623 MoaA; molybdenum cofactor biosynthesis enzyme K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D PTH_0497 ThiS; sulfur transfer protein K03636 moaD; sulfur-carrier protein D PTH_0611 MoaD; molybdopterin converting factor, small subunit K03636 moaD; sulfur-carrier protein D PTH_0244 ThiF; dinucleotide-utilizing enzymes K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80] D PTH_0498 ThiF; dinucleotide-utilizing enzymes K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80] D PTH_0612 ThiF; dinucleotide-utilizing enzymes K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80] D PTH_2609 MoaC; molybdenum cofactor biosynthesis enzyme K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D PTH_0639 ThiS; sulfur transfer protein K03154 thiS; sulfur carrier protein D PTH_2898 ThiS; sulfur transfer protein K03154 thiS; sulfur carrier protein D PTH_0642 predicted dinucleotide-utilizing enzyme K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73] C 03050 Proteasome C 03018 RNA degradation [PATH:pth03018] D PTH_2718 hypothetical protein K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D PTH_2719 hypothetical protein K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D PTH_1275 Pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D PTH_2835 Rho; transcription termination factor K03628 rho; transcription termination factor Rho D PTH_1302 hypothetical protein K18682 rny; ribonucrease Y [EC:3.1.-.-] D PTH_1289 predicted hydrolase K12574 rnj; ribonuclease J [EC:3.1.-.-] D PTH_0698 YSH1; predicted exonuclease of the beta-lactamase fold K12574 rnj; ribonuclease J [EC:3.1.-.-] D PTH_0934 YSH1; predicted exonuclease K12574 rnj; ribonuclease J [EC:3.1.-.-] D PTH_2215 PfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D PTH_0878 DnaK; molecular chaperone K04043 dnaK; molecular chaperone DnaK D PTH_2605 GroL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D PTH_1345 Hfq; Uncharacterized host factor I protein K03666 hfq; host factor-I protein B B 09124 Replication and repair C 03030 DNA replication [PATH:pth03030] D PTH_2220 DnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D PTH_0051 XerD; DNA polymerase III, gamma/tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D PTH_0063 DnaX; DNA polymerase III, gamma/tau subunits K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D PTH_0867 HolA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D PTH_0002 DnaN; DNA polymerase sliding clamp subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D PTH_2885 DnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D PTH_2165 DnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D PTH_2506 hypothetical protein K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D PTH_0906 DnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D PTH_2891 Ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D PTH_2601 RnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D PTH_2453 RnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D PTH_1708 RnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D PTH_1976 PolA; DNA polymerase I - 3'-5' exonuclease and polymerase domains K02335 polA; DNA polymerase I [EC:2.7.7.7] D PTH_2527 Lig; NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:pth03410] D PTH_2226 Nth; predicted EndoIII-related endonuclease K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D PTH_1946 Mpg; 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] D PTH_1977 Nei; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D PTH_2741 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D PTH_0942 Nfo; endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D PTH_1976 PolA; DNA polymerase I - 3'-5' exonuclease and polymerase domains K02335 polA; DNA polymerase I [EC:2.7.7.7] D PTH_1043 hypothetical protein K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D PTH_2527 Lig; NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:pth03420] D PTH_0117 hypothetical protein K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D PTH_2737 UvrA; excinuclease ATPase subunit K03701 uvrA; excinuclease ABC subunit A D PTH_2738 UvrB; helicase subunit of the DNA excision repair complex K03702 uvrB; excinuclease ABC subunit B D PTH_0116 UvrB; helicase subunit of the DNA excision repair complex K03702 uvrB; excinuclease ABC subunit B D PTH_2736 UvrC; nuclease subunit of the excinuclease complex K03703 uvrC; excinuclease ABC subunit C D PTH_2529 UvrD; superfamily I DNA and RNA helicases K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D PTH_1976 PolA; DNA polymerase I - 3'-5' exonuclease and polymerase domains K02335 polA; DNA polymerase I [EC:2.7.7.7] D PTH_2527 Lig; NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03430 Mismatch repair [PATH:pth03430] D PTH_1339 MutS; mismatch repair ATPase K03555 mutS; DNA mismatch repair protein MutS D PTH_1939 mismatch repair ATPase K07456 mutS2; DNA mismatch repair protein MutS2 D PTH_1342 MutL; DNA mismatch repair enzyme K03572 mutL; DNA mismatch repair protein MutL D PTH_2529 UvrD; superfamily I DNA and RNA helicases K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D PTH_1182 XseA; exonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D PTH_1193 XseB; exonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D PTH_1043 hypothetical protein K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D PTH_2891 Ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D PTH_2220 DnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D PTH_0002 DnaN; DNA polymerase sliding clamp subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D PTH_0051 XerD; DNA polymerase III, gamma/tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D PTH_0867 HolA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D PTH_0063 DnaX; DNA polymerase III, gamma/tau subunits K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D PTH_2527 Lig; NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D PTH_1936 Dam; site-specific DNA methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D PTH_2695 hypothetical protein K06223 dam; DNA adenine methylase [EC:2.1.1.72] C 03440 Homologous recombination [PATH:pth03440] D PTH_1043 hypothetical protein K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D PTH_2891 Ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D PTH_0003 RecF; recombinational DNA repair ATPase K03629 recF; DNA replication and repair protein RecF D PTH_0897 RecO; recombinational DNA repair protein K03584 recO; DNA repair protein RecO (recombination protein O) D PTH_0053 RecR; recombinational DNA repair protein K06187 recR; recombination protein RecR D PTH_1301 RecA; RecA/RadA recombinase K03553 recA; recombination protein RecA D PTH_1976 PolA; DNA polymerase I - 3'-5' exonuclease and polymerase domains K02335 polA; DNA polymerase I [EC:2.7.7.7] D PTH_1026 RuvA; holliday junction resolvasome, DNA-binding subunit K03550 ruvA; holliday junction DNA helicase RuvA D PTH_1027 RuvB; holliday junction resolvasome, helicase subunit K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D PTH_1025 RuvC; holliday junction resolvasome, endonuclease subunit K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D PTH_1757 RecG; RecG-like helicase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D PTH_0140 hypothetical protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D PTH_2220 DnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D PTH_0002 DnaN; DNA polymerase sliding clamp subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D PTH_0051 XerD; DNA polymerase III, gamma/tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D PTH_0867 HolA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D PTH_0063 DnaX; DNA polymerase III, gamma/tau subunits K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D PTH_1792 PriA; primosomal protein N' (replication factor Y) - superfamily II helicase K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining [PATH:pth03450] D PTH_1242 uncharacterized conserved protein K10979 ku; DNA end-binding protein Ku D PTH_1244 predicted eukaryotic-type DNA primase K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] D PTH_1243 CDC9; ATP-dependent DNA ligase K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:pth02010] D PTH_0602 TupB; ABC-type tungstate transport system, permease component K05772 tupA; tungstate transport system substrate-binding protein D PTH_0603 TupB; ABC-type tungstate transport system, permease component K05772 tupA; tungstate transport system substrate-binding protein D PTH_2624 TupA; ABC-type tungstate transport system, periplasmic component K05773 tupB; tungstate transport system permease protein D PTH_2265 CysU; ABC-type sulfate transport system, permease component K05773 tupB; tungstate transport system permease protein D PTH_0471 CbiO; ABC-type cobalt transport system, ATPase component K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6] D PTH_2264 CysA; ABC-type sulfate/molybdate transport systems, ATPase component K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6] D PTH_0235 TauA; ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic components K15553 ssuA; sulfonate transport system substrate-binding protein D PTH_0237 TauC; ABC-type nitrate/sulfonate/bicarbonate transport systemM permease component K15554 ssuC; sulfonate transport system permease protein D PTH_0236 TauB; ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D PTH_0675 ModA; ABC-type molybdate transport system, periplasmic component K02020 modA; molybdate transport system substrate-binding protein D PTH_0841 ModA; ABC-type molybdate transport system, periplasmic component K02020 modA; molybdate transport system substrate-binding protein D PTH_0676 ModC; ABC-type molybdate transport system, permease component K02018 modB; molybdate transport system permease protein D PTH_0842 CysU; ABC-type sulfate transport system, permease component K02018 modB; molybdate transport system permease protein D PTH_0677 ModC; ABC-type molybdate transport system, ATPase component K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D PTH_0843 CysA; ABC-type sulfate/molybdate transport systems, ATPase component K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D PTH_1684 RbsB; ABC-type sugar transport system, periplasmic component K10439 rbsB; ribose transport system substrate-binding protein D PTH_1683 AraH; ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components K10440 rbsC; ribose transport system permease protein D PTH_1682 MglA; ABC-type sugar transport system, ATPase component K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D PTH_1671 PstS; ABC-type phosphate transport system, permease component K02040 pstS; phosphate transport system substrate-binding protein D PTH_1673 PstC; ABC-type phosphate transport system, permease component K02037 pstC; phosphate transport system permease protein D PTH_1674 PstA; ABC-type phosphate transport system, permease component K02038 pstA; phosphate transport system permease protein D PTH_1677 PstB; ABC-type phosphate transport system, ATPase component K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D PTH_2331 HisJ; ABC-type amino acid transport/signal transduction system K17077 artQ; arginine/lysine/histidine transport system permease protein D PTH_2330 GlnQ; ABC-type polar amino acid transport system, ATPase component K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1] D PTH_2296 LivK; ABC-type branched-chain amino acid transport systems, periplasmic component K01999 livK; branched-chain amino acid transport system substrate-binding protein D PTH_0077 LivK; ABC-type branched-chain amino acid transport systems, periplasmic component K01999 livK; branched-chain amino acid transport system substrate-binding protein D PTH_0458 LivK; ABC-type branched-chain amino acid transport systems, periplasmic component K01999 livK; branched-chain amino acid transport system substrate-binding protein D PTH_2351 LivK; ABC-type branched-chain amino acid transport systems, periplasmic component K01999 livK; branched-chain amino acid transport system substrate-binding protein D PTH_2280 LivK; ABC-type branched-chain amino acid transport systems, periplasmic component K01999 livK; branched-chain amino acid transport system substrate-binding protein D PTH_2290 LivK; ABC-type branched-chain amino acid transport systems, periplasmic component K01999 livK; branched-chain amino acid transport system substrate-binding protein D PTH_2382 LivK; ABC-type branched-chain amino acid transport systems, periplasmic component K01999 livK; branched-chain amino acid transport system substrate-binding protein D PTH_0076 LivH; branched-chain amino acid ABC-type transport system, permease components K01997 livH; branched-chain amino acid transport system permease protein D PTH_2350 LivH; branched-chain amino acid ABC-type transport system, permease components K01997 livH; branched-chain amino acid transport system permease protein D PTH_0459 LivH; branched-chain amino acid ABC-type transport system, permease components K01997 livH; branched-chain amino acid transport system permease protein D PTH_0075 LivM; ABC-type branched-chain amino acid transport system, permease component K01998 livM; branched-chain amino acid transport system permease protein D PTH_0460 LivM; ABC-type branched-chain amino acid transport system, permeasecomponent K01998 livM; branched-chain amino acid transport system permease protein D PTH_0074 LivG; ABC-type branched-chain amino acid transport systems, ATPase component K01995 livG; branched-chain amino acid transport system ATP-binding protein D PTH_2348 LivG; ABC-type branched-chain amino acid transport systems, ATPase component K01995 livG; branched-chain amino acid transport system ATP-binding protein D PTH_0461 LivG; ABC-type branched-chain amino acid transport systems, ATPase component K01995 livG; branched-chain amino acid transport system ATP-binding protein D PTH_2279 LivG; ABC-type branched-chain amino acid transport systems, ATPase component K01995 livG; branched-chain amino acid transport system ATP-binding protein D PTH_0462 LivF; ABC-type branched-chain amino acid transport systems, ATPase component K01996 livF; branched-chain amino acid transport system ATP-binding protein D PTH_0073 LivF; ABC-type branched-chain amino acid transport systems, ATPase component K01996 livF; branched-chain amino acid transport system ATP-binding protein D PTH_1382 LraI; ABC-type metal ion transport system, periplasmic component/surface adhesin K09815 znuA; zinc transport system substrate-binding protein D PTH_1380 ZnuB; ABC-type Mn2+/Zn2+ transport systems, permease components K09816 znuB; zinc transport system permease protein D PTH_1381 ZnuC; ABC-type Mn/Zn transport systems, ATPase component K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D PTH_1958 hypothetical protein K02009 cbiN; cobalt/nickel transport protein D PTH_1959 CbiM; ABC-type Co2+ transport system, permease component K02007 cbiM; cobalt/nickel transport system permease protein D PTH_0949 CbiM; ABC-type Co2+ transport system, permease component K02007 cbiM; cobalt/nickel transport system permease protein D PTH_1655 CbiQ; ABC-type cobalt transport system, permease component CbiQ and related transporters K02008 cbiQ; cobalt/nickel transport system permease protein D PTH_0950 CbiQ; ABC-type cobalt transport system, permease component CbiQ and related transporters K02008 cbiQ; cobalt/nickel transport system permease protein D PTH_0951 cobalamin biosynthesis protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein D PTH_1654 CbiO; ABC-type cobalt transport system, ATPase component K02006 cbiO; cobalt/nickel transport system ATP-binding protein D PTH_0256 hypothetical membrane protein K03523 bioY; biotin transport system substrate-specific component D PTH_0354 CbiQ; ABC-type cobalt transport system, permease component CbiQ and related transporters K16785 ecfT; energy-coupling factor transport system permease protein D PTH_1659 CbiQ; ABC-type cobalt transport system, permease component CbiQ and related transporters K16785 ecfT; energy-coupling factor transport system permease protein D PTH_1480 CbiQ; ABC-type cobalt transport system, permease component CbiQ and related transporters K16785 ecfT; energy-coupling factor transport system permease protein D PTH_0351 CbiO; ABC-type cobalt transport system, ATPase component K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D PTH_1657 CbiO; ABC-type cobalt transport system, ATPase component K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D PTH_0352 CbiO; ABC-type cobalt transport system, ATPase component K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D PTH_1658 CbiO; ABC-type cobalt transport system, ATPase component K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D PTH_2576 TagG; ABC-type polysaccharide/polyol phosphate export systems, permease component K09690 wzm; homopolymeric O-antigen transport system permease protein D PTH_2575 TagH; ABC-type polysaccharide/polyol phosphate transport system, ATPase component K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14] D PTH_1374 TagG; ABC-type polysaccharide/polyolphosphate export systems, permeasecomponent K09694 nodJ; lipooligosaccharide transport system permease protein D PTH_1375 CcmA; ABC-type multidrug transport system, ATPase component K09695 nodI; lipooligosaccharide transport system ATP-binding protein D PTH_2746 FtsX; cell division protein K09811 ftsX; cell division transport system permease protein D PTH_2747 FtsE; predicted ATPase K09812 ftsE; cell division transport system ATP-binding protein D PTH_1520 Uup; ATPase components of ABC transporters K18231 msr; macrolide transport system ATP-binding/permease protein C 02060 Phosphotransferase system (PTS) C 03070 Bacterial secretion system [PATH:pth03070] D PTH_1134 PulE; type II secretory pathway, ATPase PulE/tfp pilus assembly pathway, ATPase PilB K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D PTH_1035 SecD; preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D PTH_1036 SecF; preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D PTH_0304 hypothetical membrane protein K03073 secE; preprotein translocase subunit SecE D PTH_2717 hypothetical membrane protein K03075 secG; preprotein translocase subunit SecG D PTH_0340 SecY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D PTH_1033 YajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D PTH_2919 YidC; preprotein translocase subunit YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D PTH_2753 SecA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D PTH_1737 FtsY; signal recognition particle GTPase K03110 ftsY; fused signal recognition particle receptor D PTH_1724 Ffh; signal recognition particle GTPase K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D PTH_1715 TatA; Sec-independent protein secretion pathway components K03116 tatA; sec-independent protein translocase protein TatA D PTH_1709 TatA; Sec-independent protein secretion pathway components K03116 tatA; sec-independent protein translocase protein TatA D PTH_1710 TatC; Sec-independent protein secretion pathway component TatC K03118 tatC; sec-independent protein translocase protein TatC D PTH_2488 VirD4; type IV secretory pathway, VirD4 components K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8] B B 09132 Signal transduction C 02020 Two-component system [PATH:pth02020] D PTH_1830 VicK; signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D PTH_1831 OmpR; response regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP D PTH_1670 OmpR; response regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP D PTH_1671 PstS; ABC-type phosphate transport system, permease component K02040 pstS; phosphate transport system substrate-binding protein D PTH_1883 DegQ; trypsin-like serine proteases K04771 degP; serine protease Do [EC:3.4.21.107] D PTH_2102 FliC; flagellin K02406 fliC; flagellin D PTH_2068 FliA; DNA-directed RNA polymerase specialized sigma subunit K02405 fliA; RNA polymerase sigma factor FliA D PTH_2119 MotA; flagellar motor component K02556 motA; chemotaxis protein MotA D PTH_0048 OmpR; response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D PTH_0245 hypothetical protein K07775 resD; two-component system, OmpR family, response regulator ResD D PTH_2685 OmpR; response regulator K07775 resD; two-component system, OmpR family, response regulator ResD D PTH_0450 OmpR; response regulator K07669 mprA; two-component system, OmpR family, response regulator MprA D PTH_0143 OmpR; response regulator K07670 mtrA; two-component system, OmpR family, response regulator MtrA D PTH_2387 OmpR; response regulator K07670 mtrA; two-component system, OmpR family, response regulator MtrA D PTH_0001 DnaA; ATPase K02313 dnaA; chromosomal replication initiator protein D PTH_1778 membrane signaling protein K07698 kinC; two-component system, sporulation sensor kinase C [EC:2.7.13.3] D PTH_2840 CheY; FOG: CheY-like receiver K02490 spo0F; two-component system, response regulator, stage 0 sporulation protein F D PTH_0740 CheY; FOG: CheY-like receiver K02490 spo0F; two-component system, response regulator, stage 0 sporulation protein F D PTH_1203 CitB; response regulator K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A D PTH_1335 CitE; citrate lyase beta subunit K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34] D PTH_1349 CitA; signal transduction histidine kinase K11691 K11691; two-component system, CitB family, sensor histidine kinase DctS [EC:2.7.13.3] D PTH_1350 CitB; response regulator K11692 K11692; two-component system, CitB family, response regulator DctR D PTH_2899 SfcA; malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D PTH_1777 hypothetical membrane protein K07813 agrB; accessory gene regulator B D PTH_2098 CsrA; carbon storage regulator K03563 csrA; carbon storage regulator D PTH_1443 sensor protein DegS and signal transduction histidine kinase K07777 degS; two-component system, NarL family, sensor histidine kinase DegS [EC:2.7.13.3] D PTH_1444 CitB; response regulator K07692 degU; two-component system, NarL family, response regulator DegU D PTH_1445 Flp; flp pilus assembly protein, pilin Flp, pilin Flp K02651 flp; pilus assembly protein Flp/PilA D PTH_1449 CpaB; flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB D PTH_1450 CitB; response regulator K02282 cpaE; pilus assembly protein CpaE D PTH_1451 VirB11; type IV secretory pathway, VirB11 components, and related ATPase K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D PTH_1452 TadC; flp pilus assembly protein TadC K12510 tadB; tight adherence protein B D PTH_1453 TadC; flp pilus assembly protein TadC K12511 tadC; tight adherence protein C D PTH_0665 GlnK; nitrogen regulatory protein PII K04751 glnB; nitrogen regulatory protein P-II 1 D PTH_0733 GlnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PTH_0909 GlnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PTH_2298 GlnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PTH_0731 GlnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PTH_2257 BaeS; signal transduction histidine kinase K07710 atoS; two-component system, NtrC family, sensor histidine kinase AtoS [EC:2.7.13.3] D PTH_2258 AtoC; response regulator K07714 atoC; two-component system, NtrC family, response regulator AtoC D PTH_0268 AtoD; acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9] D PTH_0269 AtoA; acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9] D PTH_0274 AtoE; short chain fatty acids transporter K02106 atoE; short-chain fatty acids transporter D PTH_0270 PaaJ; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D PTH_2724 RpoN; DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog K03092 rpoN; RNA polymerase sigma-54 factor D PTH_1701 HyaA; Ni,Fe-hydrogenase I small subunit K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6] D PTH_1702 HyaB; Ni,Fe-hydrogenase I large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6] D PTH_2064 CheR; methylase of chemotaxis methyl-accepting proteins K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D PTH_0006 hypothetical membrane protein K03406 mcp; methyl-accepting chemotaxis protein D PTH_2588 Tar; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D PTH_2855 Tar; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D PTH_2117 CheW; chemotaxis signal transduction protein K03408 cheW; purine-binding chemotaxis protein CheW D PTH_2116 CheA; chemotaxis protein histidine kinase and related kinases K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D PTH_2062 CheY; FOG: CheY-like receiver K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D PTH_2115 CheB; chemotaxis replicative DNA helicase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D PTH_2821 WecB; UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D PTH_2386 BaeS; signal transduction histidine kinase K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3] D PTH_2114 FlgM; negative regulator of flagellin synthesis K02398 flgM; negative regulator of flagellin synthesis FlgM C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:pth02024] D PTH_1345 Hfq; Uncharacterized host factor I protein K03666 hfq; host factor-I protein D PTH_1628 TrpE; anthranilate/para-aminobenzoate synthases component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D PTH_0048 OmpR; response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D PTH_2296 LivK; ABC-type branched-chain amino acid transport systems, periplasmic component K01999 livK; branched-chain amino acid transport system substrate-binding protein D PTH_0077 LivK; ABC-type branched-chain amino acid transport systems, periplasmic component K01999 livK; branched-chain amino acid transport system substrate-binding protein D PTH_0458 LivK; ABC-type branched-chain amino acid transport systems, periplasmic component K01999 livK; branched-chain amino acid transport system substrate-binding protein D PTH_2351 LivK; ABC-type branched-chain amino acid transport systems, periplasmic component K01999 livK; branched-chain amino acid transport system substrate-binding protein D PTH_2280 LivK; ABC-type branched-chain amino acid transport systems, periplasmic component K01999 livK; branched-chain amino acid transport system substrate-binding protein D PTH_2290 LivK; ABC-type branched-chain amino acid transport systems, periplasmic component K01999 livK; branched-chain amino acid transport system substrate-binding protein D PTH_2382 LivK; ABC-type branched-chain amino acid transport systems, periplasmic component K01999 livK; branched-chain amino acid transport system substrate-binding protein D PTH_0076 LivH; branched-chain amino acid ABC-type transport system, permease components K01997 livH; branched-chain amino acid transport system permease protein D PTH_2350 LivH; branched-chain amino acid ABC-type transport system, permease components K01997 livH; branched-chain amino acid transport system permease protein D PTH_0459 LivH; branched-chain amino acid ABC-type transport system, permease components K01997 livH; branched-chain amino acid transport system permease protein D PTH_0075 LivM; ABC-type branched-chain amino acid transport system, permease component K01998 livM; branched-chain amino acid transport system permease protein D PTH_0460 LivM; ABC-type branched-chain amino acid transport system, permeasecomponent K01998 livM; branched-chain amino acid transport system permease protein D PTH_0074 LivG; ABC-type branched-chain amino acid transport systems, ATPase component K01995 livG; branched-chain amino acid transport system ATP-binding protein D PTH_2348 LivG; ABC-type branched-chain amino acid transport systems, ATPase component K01995 livG; branched-chain amino acid transport system ATP-binding protein D PTH_0461 LivG; ABC-type branched-chain amino acid transport systems, ATPase component K01995 livG; branched-chain amino acid transport system ATP-binding protein D PTH_2279 LivG; ABC-type branched-chain amino acid transport systems, ATPase component K01995 livG; branched-chain amino acid transport system ATP-binding protein D PTH_0462 LivF; ABC-type branched-chain amino acid transport systems, ATPase component K01996 livF; branched-chain amino acid transport system ATP-binding protein D PTH_0073 LivF; ABC-type branched-chain amino acid transport systems, ATPase component K01996 livF; branched-chain amino acid transport system ATP-binding protein D PTH_2407 hypothetical membrane protein K13075 ahlD; N-acyl homoserine lactone hydrolase [EC:3.1.1.81] D PTH_1376 CaiC; acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D PTH_1890 CaiC; acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D PTH_1761 pyrimidine reductase and Pyrimidine deaminase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D PTH_0093 Uncharacterized protein conserved in bacteria K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D PTH_1777 hypothetical membrane protein K07813 agrB; accessory gene regulator B D PTH_0941 DdpA; ABC-type dipeptide transport system, periplasmic component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D PTH_1488 DdpA; ABC-type dipeptide transport system, periplasmic component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D PTH_1487 DppB; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K02033 ABC.PE.P; peptide/nickel transport system permease protein D PTH_1486 DppC; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K02034 ABC.PE.P1; peptide/nickel transport system permease protein D PTH_1485 ATPase components of various ABC-type transport systems, contain duplicated ATPase K02031 ddpD; peptide/nickel transport system ATP-binding protein D PTH_2919 YidC; preprotein translocase subunit YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D PTH_0304 hypothetical membrane protein K03073 secE; preprotein translocase subunit SecE D PTH_2717 hypothetical membrane protein K03075 secG; preprotein translocase subunit SecG D PTH_0340 SecY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D PTH_1033 YajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D PTH_2753 SecA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D PTH_1737 FtsY; signal recognition particle GTPase K03110 ftsY; fused signal recognition particle receptor D PTH_1724 Ffh; signal recognition particle GTPase K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D PTH_1444 CitB; response regulator K07692 degU; two-component system, NarL family, response regulator DegU D PTH_2840 CheY; FOG: CheY-like receiver K02490 spo0F; two-component system, response regulator, stage 0 sporulation protein F D PTH_0740 CheY; FOG: CheY-like receiver K02490 spo0F; two-component system, response regulator, stage 0 sporulation protein F D PTH_1203 CitB; response regulator K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A D PTH_1370 hypothetical protein K01114 plc; phospholipase C [EC:3.1.4.3] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis [PATH:pth02030] D PTH_0006 hypothetical membrane protein K03406 mcp; methyl-accepting chemotaxis protein D PTH_2588 Tar; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D PTH_2855 Tar; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D PTH_1684 RbsB; ABC-type sugar transport system, periplasmic component K10439 rbsB; ribose transport system substrate-binding protein D PTH_2116 CheA; chemotaxis protein histidine kinase and related kinases K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D PTH_2117 CheW; chemotaxis signal transduction protein K03408 cheW; purine-binding chemotaxis protein CheW D PTH_2062 CheY; FOG: CheY-like receiver K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D PTH_2063 CheC; chemotaxis protein CheC K03410 cheC; chemotaxis protein CheC D PTH_2115 CheB; chemotaxis replicative DNA helicase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D PTH_2065 CheD; chemotaxis protein K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D PTH_2064 CheR; methylase of chemotaxis methyl-accepting proteins K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D PTH_2088 FliG; flagellar motor switch protein K02410 fliG; flagellar motor switch protein FliG D PTH_2061 FliM; flagellar motor switch protein K02416 fliM; flagellar motor switch protein FliM D PTH_2060 FliY; flagellum motor switch protein K02417 fliN; flagellar motor switch protein FliN D PTH_2078 FliN; flagellar motor switch/type III secretory pathway protein K02417 fliN; flagellar motor switch protein FliN D PTH_2119 MotA; flagellar motor component K02556 motA; chemotaxis protein MotA D PTH_2118 MotB; flagellar motor protein K02557 motB; chemotaxis protein MotB C 02040 Flagellar assembly [PATH:pth02040] D PTH_2090 FliE; flagellar hook-basal body protein K02408 fliE; flagellar hook-basal body complex protein FliE D PTH_2089 FliF; flagellar biosynthesis/type III secretory pathway lipoprotein K02409 fliF; flagellar M-ring protein FliF D PTH_2088 FliG; flagellar motor switch protein K02410 fliG; flagellar motor switch protein FliG D PTH_2087 FliH; flagellar biosynthesis/type III secretory pathway protein K02411 fliH; flagellar assembly protein FliH D PTH_2085 FliI; flagellar biosynthesis/type III secretory pathway ATPase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D PTH_2084 FliJ; flagellar biosynthesis chaperone K02413 fliJ; flagellar protein FliJ D PTH_2083 hypothetical protein K02414 fliK; flagellar hook-length control protein FliK D PTH_2079 FliL; flagellar basal body-associated protein K02415 fliL; flagellar protein FliL D PTH_2061 FliM; flagellar motor switch protein K02416 fliM; flagellar motor switch protein FliM D PTH_2060 FliY; flagellum motor switch protein K02417 fliN; flagellar motor switch protein FliN D PTH_2078 FliN; flagellar motor switch/type III secretory pathway protein K02417 fliN; flagellar motor switch protein FliN D PTH_2077 FliO; flagellar biogenesis protein K02418 fliO; flagellar protein FliO/FliZ D PTH_2076 FliP; flagellar biosynthesis pathway, component FliP K02419 fliP; flagellar biosynthesis protein FliP D PTH_2075 FliQ; flagellar biosynthesis pathway, component FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D PTH_2074 FliR; flagellar biosynthesis pathway, component FliR K02421 fliR; flagellar biosynthesis protein FliR D PTH_2072 FlhA; flagellar biosynthesis pathway, component FlhA K02400 flhA; flagellar biosynthesis protein FlhA D PTH_2073 FlhB; flagellar biosynthesis pathway, component FlhB K02401 flhB; flagellar biosynthesis protein FlhB D PTH_2092 FlgB; flagellar basal body protein K02387 flgB; flagellar basal-body rod protein FlgB D PTH_2091 FlgC; flagellar basal body rod protein K02388 flgC; flagellar basal-body rod protein FlgC D PTH_2082 FlgD; flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD D PTH_2080 FlgG; flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE D PTH_2067 FlgE; flagellar hook protein FlgE K02391 flgF; flagellar basal-body rod protein FlgF D PTH_2066 FlgG; flagellar basal body rod protein K02392 flgG; flagellar basal-body rod protein FlgG D PTH_2112 FlgK; flagellar hook-associated protein K02396 flgK; flagellar hook-associated protein 1 D PTH_2111 FlgL; flagellin and related hook-associated proteins K02397 flgL; flagellar hook-associated protein 3 FlgL D PTH_2102 FliC; flagellin K02406 fliC; flagellin D PTH_2096 FliD; flagellar capping protein K02407 fliD; flagellar hook-associated protein 2 D PTH_2095 FliS; flagellin-specific chaperone FliS K02422 fliS; flagellar secretion chaperone FliS D PTH_2119 MotA; flagellar motor component K02556 motA; chemotaxis protein MotA D PTH_2118 MotB; flagellar motor protein K02557 motB; chemotaxis protein MotB D PTH_2114 FlgM; negative regulator of flagellin synthesis K02398 flgM; negative regulator of flagellin synthesis FlgM D PTH_0907 RpoD; DNA-directed RNA polymerase, sigma subunit K03086 rpoD; RNA polymerase primary sigma factor D PTH_2724 RpoN; DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog K03092 rpoN; RNA polymerase sigma-54 factor D PTH_2068 FliA; DNA-directed RNA polymerase specialized sigma subunit K02405 fliA; RNA polymerase sigma factor FliA C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D PTH_2718 hypothetical protein K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D PTH_2719 hypothetical protein K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism D PTH_1416 ArgK; putative periplasmic protein kinase ArgK and related GTPase of G3E family K07588 MMAA; GTPase [EC:3.6.5.-] C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:pth01501] D PTH_2281 beta-glucosidase-related glycosidases and D-alanyl-D-alanine dipeptidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D PTH_1935 MrcB; membrane carboxypeptidase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D PTH_0820 FtsI; cell division protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D PTH_1070 FtsI; cell division protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:pth01502] D PTH_1390 DdlA; D-alanine-D-alanine ligase and related ATP-grasp enzymes K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D PTH_0660 Alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D PTH_1865 MurF; UDP-N-acetylmuramyl pentapeptide synthase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D PTH_1864 Rfe; UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D PTH_1861 MurG; UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:pth01503] D PTH_0361 AmiC; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D PTH_0786 hypothetical protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D PTH_0438 AmiC; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D PTH_2007 AmiC; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D PTH_1971 AmiC; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D PTH_1425 AmiC; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D PTH_1883 DegQ; trypsin-like serine proteases K04771 degP; serine protease Do [EC:3.4.21.107] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:pth01000] C 01001 Protein kinases [BR:pth01001] D PTH_1781 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D PTH_2273 RsbW; anti-sigma regulatory factor K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] D PTH_1094 Mrp; ATPase involved in chromosome partitioning K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3] D PTH_1830 VicK; signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D PTH_0036 hypothetical membrane-associated sensory histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D PTH_0451 BaeS; signal transduction histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D PTH_1443 sensor protein DegS and signal transduction histidine kinase K07777 degS; two-component system, NarL family, sensor histidine kinase DegS [EC:2.7.13.3] D PTH_1778 membrane signaling protein K07698 kinC; two-component system, sporulation sensor kinase C [EC:2.7.13.3] D PTH_1349 CitA; signal transduction histidine kinase K11691 K11691; two-component system, CitB family, sensor histidine kinase DctS [EC:2.7.13.3] D PTH_0654 hypothetical regulator protein K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3] D PTH_2257 BaeS; signal transduction histidine kinase K07710 atoS; two-component system, NtrC family, sensor histidine kinase AtoS [EC:2.7.13.3] D PTH_2640 hypothetical signal transduction histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D PTH_2116 CheA; chemotaxis protein histidine kinase and related kinases K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D PTH_2386 BaeS; signal transduction histidine kinase K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:pth01009] D PTH_1729 SAM1; S-adenosylhomocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D PTH_2215 PfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D PTH_1784 PTC1; serine/threonine protein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] C 01002 Peptidases and inhibitors [BR:pth01002] D PTH_1819 LspA; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] D PTH_1144 PulO; type II secretory pathway, prepilin signal peptidase PulO and related peptidases K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D PTH_1446 PulO; type II secretory pathway, prepilin signal peptidase PulO and related peptidases, prepilin signal peptidase PulO and related peptidases K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43] D PTH_1755 peptidase_U3, Germination protease K06012 gpr; spore protease [EC:3.4.24.78] D PTH_1700 HyaD; Ni,Fe-hydrogenase maturation factor K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-] D PTH_1847 peptidase_U4, Sporulation factor SpoIIGA K06383 spoIIGA; stage II sporulation protein GA (sporulation sigma-E factor processing peptidase) [EC:3.4.23.-] D PTH_2551 hypothetical GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D PTH_1023 hypothetical protein K19224 lytE; peptidoglycan DL-endopeptidase LytE [EC:3.4.-.-] D PTH_2675 hypothetical membrane protein K20742 ykfC; gamma-D-glutamyl-L-lysine dipeptidyl-peptidase [EC:3.4.14.13] D PTH_2545 PurF; glutamine phosphoribosylpyrophosphate amidotransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D PTH_0734 GltB; glutamate synthase domain 2 K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D PTH_0539 GlmS; glucosamine 6-phosphate synthetase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D PTH_0673 AsnB; asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D PTH_1777 hypothetical membrane protein K07813 agrB; accessory gene regulator B D PTH_0377 predicted metal-dependent membrane protease K07052 K07052; CAAX protease family protein D PTH_1306 Zn-dependent dipeptidase, microsomal dipeptidase homolog K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D PTH_1208 PepD; di- and tripeptidases K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4] D PTH_0341 Map; methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D PTH_1161 PepP; Xaa-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D PTH_0198 HflB; ATP-dependent Zn proteases K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D PTH_1299 HflB; ATP-dependent Zn proteases K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D PTH_1960 HtpX; Zn-dependent protease K03799 htpX; heat shock protein HtpX [EC:3.4.24.-] D PTH_0826 SpoIVFB; Zn-dependent protease K06402 spoIVFB; stage IV sporulation protein FB [EC:3.4.24.-] D PTH_1261 predicted membrane-associated Zn-dependent protease 1 K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D PTH_1019 DppA; D-aminopeptidase K16203 dppA1; D-amino peptidase [EC:3.4.11.-] D PTH_1883 DegQ; trypsin-like serine proteases K04771 degP; serine protease Do [EC:3.4.21.107] D PTH_1223 DacC; D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D PTH_1277 DacC; D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D PTH_1876 DacC; D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D PTH_1968 DacC; D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D PTH_0804 ClpP; protease subunit of ATP-dependent Clp proteases K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D PTH_2886 LonB; predicted ATP-dependent protease K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D PTH_0807 Lon; ATP-dependent Lon protease K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D PTH_0806 LonB; predicted ATP-dependent protease K04076 lonB; ATP-dependent Lon protease [EC:3.4.21.53] D PTH_1353 LexA; SOS-response transcriptional repressors K01356 lexA; repressor LexA [EC:3.4.21.88] D PTH_1471 LexA; SOS-response transcriptional repressors K01356 lexA; repressor LexA [EC:3.4.21.88] D PTH_1717 LepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D PTH_2744 Prc; Periplasmic protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D PTH_1975 Prc; Periplasmic protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D PTH_2842 SppA; Periplasmic serine proteases K04773 sppA; protease IV [EC:3.4.21.-] D PTH_2662 GlpG; Uncharacterized membrane protein K07059 K07059; rhomboid family protein D PTH_1202 predicted membrane-associated Zn-dependent protease 1 K06399 spoIVB; stage IV sporulation protein B [EC:3.4.21.116] D PTH_1249 HslV; ATP-dependent protease HslVU (ClpYQ), peptidase subunit K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] D PTH_1687 asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D PTH_1069 collagenase and related proteases K08303 prtC; U32 family peptidase [EC:3.4.-.-] D PTH_1944 collagenase and related proteases K08303 prtC; U32 family peptidase [EC:3.4.-.-] D PTH_1159 TldD; predicted Zn-dependent protease and their inactivated homologs K03592 pmbA; PmbA protein D PTH_1158 TldD; predicted Zn-dependent protease and their inactivated homologs K03568 tldD; TldD protein C 01003 Glycosyltransferases [BR:pth01003] D PTH_1384 RfaG; glycosyltransferase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337] D PTH_1264 MurG; UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315] D PTH_1935 MrcB; membrane carboxypeptidase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D PTH_1013 MrcB; membrane carboxypeptidase K21464 pbpG; penicillin-binding protein 2D [EC:2.4.99.28 3.4.16.4] D PTH_2780 WecG; teichoic acid biosynthesis proteins K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187] D PTH_2769 Rfe; UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D PTH_0560 OtsA; trehalose-6-phosphate synthase K16055 TPS; trehalose 6-phosphate synthase/phosphatase [EC:2.4.1.15 3.1.3.12] C 01005 Lipopolysaccharide biosynthesis proteins [BR:pth01005] D PTH_0042 hypothetical membrane protein K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-] D PTH_2769 Rfe; UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:pth01011] D PTH_2858 MurA; UDP-N-acetylglucosamine enolpyruvyl transferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D PTH_1858 MurA; UDP-N-acetylglucosamine enolpyruvyl transferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D PTH_1859 MurB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D PTH_1860 MurC; UDP-N-acetylmuramate-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D PTH_1863 MurD; UDP-N-acetylmuramoylalanine-D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D PTH_1866 MurE; UDP-N-acetylmuramyl tripeptide synthase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D PTH_1390 DdlA; D-alanine-D-alanine ligase and related ATP-grasp enzymes K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D PTH_0660 Alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D PTH_0922 MurI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D PTH_0787 MurI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D PTH_1864 Rfe; UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D PTH_1861 MurG; UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D PTH_1292 BacA; Uncharacterized bacitracin resistance protein K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D PTH_2761 MviN; Uncharacterized membrane protein K03980 murJ; putative peptidoglycan lipid II flippase D PTH_1108 MviN; Uncharacterized membrane protein K03980 murJ; putative peptidoglycan lipid II flippase D PTH_1935 MrcB; membrane carboxypeptidase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D PTH_1013 MrcB; membrane carboxypeptidase K21464 pbpG; penicillin-binding protein 2D [EC:2.4.99.28 3.4.16.4] D PTH_0820 FtsI; cell division protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D PTH_1070 FtsI; cell division protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D PTH_1867 FtsI; cell division protein FtsI/penicillin-binding protein 2 K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein) D PTH_1782 FtsI; cell division protein FtsI/penicillin-binding protein 2 K05364 pbpA; penicillin-binding protein A D PTH_1223 DacC; D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D PTH_1277 DacC; D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D PTH_1876 DacC; D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D PTH_1968 DacC; D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D PTH_1023 hypothetical protein K19224 lytE; peptidoglycan DL-endopeptidase LytE [EC:3.4.-.-] D PTH_1980 hypothetical protein K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D PTH_1068 predicted periplasmic solute-binding protein K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D PTH_1982 SleB; cell wall hydrolyses K27245 sleB; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D PTH_2853 hypothetical protein K27245 sleB; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D PTH_2151 SleB; cell wall hydrolyses involved in spore germination K27245 sleB; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D PTH_2809 hypothetical membrane protein K06381 spoIID; stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:4.2.2.29] D PTH_0123 SpoIID; sporulation protein and related proteins, membrane protein K06381 spoIID; stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:4.2.2.29] D PTH_0361 AmiC; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D PTH_0786 hypothetical protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D PTH_0438 AmiC; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D PTH_2007 AmiC; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D PTH_1971 AmiC; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D PTH_1425 AmiC; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] C 01004 Lipid biosynthesis proteins [BR:pth01004] D PTH_1743 FabD; (acyl-carrier-protein) S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D PTH_1745 FabH; 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D PTH_1739 FabB; 3-oxoacyl-(acyl-carrier-protein) synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D PTH_1742 FabG; dehydrogenases with different specificities K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D PTH_2770 FabA; 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D PTH_1744 dioxygenases related to 2-nitropropane dioxygenase K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9] D PTH_2131 Acs; acyl-coenzyme A synthetases/AMP-(fatty) acid ligases K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D PTH_1750 acyl-CoA synthetase K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13] D PTH_1507 acyl-CoA synthetase K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13] D PTH_0490 acyl-CoA synthetase K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13] D PTH_2237 acyl-CoA synthetase K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13] D PTH_1376 CaiC; acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D PTH_1890 CaiC; acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D PTH_0838 CaiC; acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-] D PTH_1548 CaiC; acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-] D PTH_1746 PlsX; fatty acid/phospholipid biosynthesis enzyme K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D PTH_1608 predicted membrane protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D PTH_1618 PlsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins C 01006 Prenyltransferases [BR:pth01006] D PTH_1194 IspA; geranylgeranyl pyrophosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D PTH_0969 IspA; geranylgeranyl pyrophosphate synthase K24873 hepT; heptaprenyl diphosphate synthase component 2 [EC:2.5.1.30] D PTH_1440 hypothetical protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D PTH_1257 UppS; undecaprenyl pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D PTH_1344 MiaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D PTH_1437 UbiA; 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] C 01007 Amino acid related enzymes [BR:pth01007] D PTH_2867 GlnS; glutamyl- and glutaminyl-tRNA synthetases K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D PTH_0293 GlnS; glutamyl- and glutaminyl-tRNA synthetases K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24] D PTH_1020 TyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D PTH_1238 TrpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D PTH_0295 CysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D PTH_2844 ArgS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D PTH_0069 MetG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D PTH_1820 IleS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D PTH_0812 ValS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D PTH_0839 LeuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D PTH_0263 LysU; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D PTH_1049 AspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D PTH_1420 AsnS; aspartyl/asparaginyl-tRNA synthetases K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D PTH_1048 HisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D PTH_0899 GlyQ; glycyl-tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D PTH_0900 GlyS; glycyl-tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D PTH_0013 SerS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D PTH_1263 ProS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D PTH_1956 ThrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D PTH_1060 AlaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D PTH_1061 AlaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D PTH_1950 PheS; phenylalanyl-tRNA synthetase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D PTH_1949 PheT; phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D PTH_1798 aspartate/tyrosine/aromatic aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D PTH_1421 aspartate/tyrosine/aromatic aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D PTH_1799 aspartate/tyrosine/aromatic aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83] D PTH_1308 aspartate/tyrosine/aromatic aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83] D PTH_2849 aspartate/tyrosine/aromatic aminotransferase K10907 K10907; aminotransferase [EC:2.6.1.-] D PTH_2537 HisC; histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D PTH_0504 ArgD; ornithine/acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D PTH_1185 GabT; 4-aminobutyrate aminotransferase and related aminotransferases K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D PTH_1726 ArgD; ornithine/acetylornithine aminotransferase K09251 patA; putrescine aminotransferase [EC:2.6.1.82] D PTH_0979 HemL; glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D PTH_0525 IlvE; branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D PTH_1115 WecE; predicted pyridoxal phosphate-dependent enzyme K13010 per; perosamine synthetase [EC:2.6.1.102] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:pth00194] D PTH_2811 AtpC; F0F1-type ATP synthase, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D PTH_2812 AtpD; F0F1-type ATP synthase, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D PTH_2813 AtpG; F0F1-type ATP synthase, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D PTH_2814 AtpA; F0F1-type ATP synthase, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D PTH_2815 AtpH; F0F1-type ATP synthase, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D PTH_2816 AtpF; F0F1-type ATP synthase, subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b D PTH_2817 AtpE; F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K K02110 ATPF0C; F-type H+-transporting ATPase subunit c D PTH_2818 AtpB; F0F1-type ATP synthase, subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a D PTH_2820 hypothetical membrane protein K02116 atpI; ATP synthase protein I B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:pth03000] D PTH_1521 Uncharacterized protein conserved in bacteria K13653 K13653; AraC family transcriptional regulator D PTH_2800 hypothetical protein K06283 spoIIID; putative DeoR family transcriptional regulator, stage III sporulation protein D D PTH_0901 predicted transcriptional regulator K23774 ccpN; DeoR family transcriptional regulator, catabolite repression regulator D PTH_2233 FadR; transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D PTH_2232 FadR; transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D PTH_1513 AcrR; transcriptional regulator K09017 rutR; TetR/AcrR family transcriptional regulator D PTH_0211 AcrR; transcriptional regulator K13770 ysiA; TetR/AcrR family transcriptional regulator, fatty acid metabolism regulator protein D PTH_1383 Fur; Fe2+/Zn2+ uptake regulation proteins K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D PTH_1875 Fur; Fe2+/Zn2+ uptake regulation proteins K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D PTH_0045 Fur; Fe2+/Zn2+ uptake regulation proteins K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator D PTH_0477 IclR; transcriptional regulator K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor D PTH_0030 IclR; transcriptional regulator K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor D PTH_0781 Crp; cAMP-binding proteins K21563 dnr; CRP/FNR family transcriptional regulator, dissimilatory nitrate respiration regulator D PTH_0234 predicted transcriptional regulator K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor D PTH_1053 predicted transcriptional regulator K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor D PTH_0439 ArsR; predicted transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D PTH_0545 ArsR; predicted transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D PTH_0232 ArsR; predicted transcriptional regulator K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor D PTH_1500 ArsR; predicted transcriptional regulator K26993 sdpR; ArsR family transcriptional regulator, repressor of sdpIR and other operons D PTH_1940 TroR; Mn-dependent transcriptional regulator K11924 mntR; DtxR family transcriptional regulator, manganese transport regulator D PTH_0255 BirA; biotin-(acetyl-CoA carboxylase) ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D PTH_2900 AcoR; transcriptional activator of acetoin/glycerol metabolism K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D PTH_0844 RocR; transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D PTH_2013 CdaR; sugar diacid utilization regulator K02647 cdaR; carbohydrate diacid regulator D PTH_2626 ModE; N-terminal domain of molybdenum-binding protein K02019 modE; molybdate transport system regulatory protein D PTH_0840 ModE; N-terminal domain of molybdenum-binding protein K02019 modE; molybdate transport system regulatory protein D PTH_0985 AT-rich DNA-binding protein K01926 rex; redox-sensing transcriptional repressor D PTH_1251 CodY; pleiotropic transcriptional repressor K03706 codY; transcriptional pleiotropic repressor D PTH_0737 hypothetical protein K07723 ndoAI; CopG family transcriptional regulator / antitoxin EndoAI D PTH_0266 regulator of polyketide synthase expression K09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein D PTH_0067 AbrB; regulators of stationary/sporulation gene expression K06284 abrB; AbrB family transcriptional regulator, transcriptional pleiotropic regulator of transition state genes D PTH_0119 AbrB; regulators of stationary/sporulation gene expression K04769 spoVT; AbrB family transcriptional regulator, stage V sporulation protein T D PTH_0638 hypothetical protein K04769 spoVT; AbrB family transcriptional regulator, stage V sporulation protein T D PTH_2913 Spo0J; predicted transcriptional regulator K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D PTH_0287 transcriptional regulator K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription D PTH_1200 ArgR; arginine repressor K03402 argR; transcriptional regulator of arginine metabolism D PTH_0875 HrcA; transcriptional regulator of heat shock gene K03705 hrcA; heat-inducible transcriptional repressor D PTH_0280 CtsR; transcriptional repressor of class III stress genes K03708 ctsR; transcriptional regulator of stress and heat shock response D PTH_2219 hypothetical protein K06285 mtrB; transcription attenuation protein (tryptophan RNA-binding attenuator protein) D PTH_1813 PyrR; pyrimidine operon attenuation protein/uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D PTH_1843 predicted transcriptional regulator K07738 nrdR; transcriptional repressor NrdR D PTH_1870 Uncharacterized protein conserved in bacteria K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:pth03021] D PTH_0349 RpoA; DNA-directed RNA polymerase, alpha subunit/40 kD subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D PTH_0312 RpoB; DNA-directed RNA polymerase, beta subunit/140 kD subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D PTH_0313 RpoC; DNA-directed RNA polymerase, beta' subunit/160 kD subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D PTH_1794 RpoZ; DNA-directed RNA polymerase, subunit K/omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D PTH_0907 RpoD; DNA-directed RNA polymerase, sigma subunit K03086 rpoD; RNA polymerase primary sigma factor D PTH_0671 RpoE; DNA-directed RNA polymerase specialized sigma subunit K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D PTH_2793 RpoE; DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D PTH_2384 RpoE; DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D PTH_1558 RpoE; DNA-directed RNA polymerase specialized sigma subunit K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D PTH_0768 RpoE; DNA-directed RNA polymerase specialized sigma subunit K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D PTH_2134 RpoE; DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D PTH_2269 RpoE; DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D PTH_1148 FliA; DNA-directed RNA polymerase specialized sigma subunit K03090 sigB; RNA polymerase sigma-B factor D PTH_1226 FliA; DNA-directed RNA polymerase specialized sigma subunit K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor D PTH_1845 FliA; DNA-directed RNA polymerase specialized sigma subunit K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor D PTH_1846 FliA; DNA-directed RNA polymerase specialized sigma subunit K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor D PTH_1126 hypothetical protein K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor D PTH_1122 RpoD; DNA-directed RNA polymerase, sigma subunit K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor D PTH_0301 RpoE; DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog K27000 sigH; RNA polymerase sigma-H factor D PTH_1679 FliA; DNA-directed RNA polymerase specialized sigma subunit K03093 sigI; RNA polymerase sigma-I factor D PTH_2724 RpoN; DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog K03092 rpoN; RNA polymerase sigma-54 factor D PTH_2068 FliA; DNA-directed RNA polymerase specialized sigma subunit K02405 fliA; RNA polymerase sigma factor FliA D PTH_1266 NusA; transcription elongation factor K02600 nusA; transcription termination/antitermination protein NusA D PTH_1179 NusB; transcription termination factor K03625 nusB; transcription antitermination protein NusB D PTH_0305 NusG; transcription antiterminator K02601 nusG; transcription termination/antitermination protein NusG D PTH_2274 RsbU; serine phosphatase RsbU K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3] D PTH_2272 SpoIIAA; anti-anti-sigma regulatory factor K04749 rsbV; anti-sigma B factor antagonist D PTH_2273 RsbW; anti-sigma regulatory factor K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] D PTH_0262 GreA; transcription elongation factor K03624 greA; transcription elongation factor GreA D PTH_0541 hypothetical protein K03624 greA; transcription elongation factor GreA D PTH_2835 Rho; transcription termination factor K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:pth03019] D PTH_0829 CafA; ribonucleases G and E K08301 rng; ribonuclease G [EC:3.1.26.-] D PTH_1738 Rnc; dsRNA-specific ribonuclease K03685 rnc; ribonuclease III [EC:3.1.26.3] D PTH_1289 predicted hydrolase K12574 rnj; ribonuclease J [EC:3.1.-.-] D PTH_0698 YSH1; predicted exonuclease of the beta-lactamase fold K12574 rnj; ribonuclease J [EC:3.1.-.-] D PTH_0934 YSH1; predicted exonuclease K12574 rnj; ribonuclease J [EC:3.1.-.-] D PTH_1302 hypothetical protein K18682 rny; ribonucrease Y [EC:3.1.-.-] D PTH_1996 predicted HD-superfamily hydrolase K03698 cbf; 3'-5' exoribonuclease [EC:3.1.-.-] D PTH_2718 hypothetical protein K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D PTH_2719 hypothetical protein K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D PTH_1275 Pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D PTH_2835 Rho; transcription termination factor K03628 rho; transcription termination factor Rho D PTH_2215 PfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D PTH_0878 DnaK; molecular chaperone K04043 dnaK; molecular chaperone DnaK D PTH_2605 GroL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D PTH_1345 Hfq; Uncharacterized host factor I protein K03666 hfq; host factor-I protein D PTH_2098 CsrA; carbon storage regulator K03563 csrA; carbon storage regulator D PTH_2729 predicted P-loop-containing kinase K06958 rapZ; RNase adapter protein RapZ C 03041 Spliceosome C 03011 Ribosome [BR:pth03011] D PTH_1619 hypothetical protein K02945 RP-S1; small subunit ribosomal protein S1 D PTH_2479 hypothetical RNA-binding protein K02945 RP-S1; small subunit ribosomal protein S1 D PTH_1252 RpsB; ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D PTH_0326 RpsC; ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D PTH_0347 RpsD; ribosomal protein S4 and related proteins K02986 RP-S4; small subunit ribosomal protein S4 D PTH_0336 RpsE; ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D PTH_2892 RpsF; ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D PTH_0316 RpsG; ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D PTH_0333 RpsH; ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D PTH_0357 RpsI; ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D PTH_0319 RpsJ; ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D PTH_0346 RpsK; ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D PTH_0315 RpsL; ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D PTH_0345 RpsM; ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D PTH_1274 RpsO; ribosomal protein S15P/S13E K02956 RP-S15; small subunit ribosomal protein S15 D PTH_1723 RpsP; ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D PTH_0329 RpsQ; ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D PTH_2890 RpsR; ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D PTH_0324 RpsS; ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D PTH_0869 RpsT; ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D PTH_0307 RplA; ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D PTH_0323 RplB; ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D PTH_0320 RplC; ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D PTH_0321 RplD; ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D PTH_0332 RplE; ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D PTH_0334 RplF; ribosomal protein L6P/L9E K02933 RP-L6; large subunit ribosomal protein L6 D PTH_2887 RplI; ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D PTH_0308 RplJ; ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D PTH_0306 RplK; ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D PTH_0309 RplL; ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D PTH_0356 RplM; ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D PTH_0330 RplN; ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D PTH_0338 RplO; ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D PTH_0327 RplP; ribosomal protein L16/L10E K02878 RP-L16; large subunit ribosomal protein L16 D PTH_0350 RplQ; ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D PTH_0335 RplR; ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D PTH_1718 RplS; ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D PTH_1953 RplT; ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D PTH_0830 RplU; ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D PTH_0325 RplV; ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D PTH_0322 RplW; ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D PTH_0331 RplX; ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D PTH_0831 RpmA; ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D PTH_0328 RpmC; ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D PTH_0337 RpmD; ribosomal protein L30/L7E K02907 RP-L30; large subunit ribosomal protein L30 D PTH_2832 RpmE; ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D PTH_0303 RpmG; ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D PTH_1954 RpmI; ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D PTH_0344 RpmJ; ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D PTH_0112 RplY; ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D PTH_0314 RPL8A; ribosomal protein HS6-type K07590 RP-L7A; large subunit ribosomal protein L7A D PTH_r006 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D PTH_r003 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D PTH_r004 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D PTH_r001 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D PTH_r002 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D PTH_r005 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:pth03009] D PTH_1738 Rnc; dsRNA-specific ribonuclease K03685 rnc; ribonuclease III [EC:3.1.26.3] D PTH_0895 Era; GTPase K03595 era; GTPase D PTH_0833 Obg; predicted GTPase K03979 obgE; GTPase [EC:3.6.5.-] D PTH_1266 NusA; transcription elongation factor K02600 nusA; transcription termination/antitermination protein NusA D PTH_1179 NusB; transcription termination factor K03625 nusB; transcription antitermination protein NusB D PTH_0305 NusG; transcription antiterminator K02601 nusG; transcription termination/antitermination protein NusG D PTH_1634 RsuA; 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] D PTH_0080 KsgA; dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D PTH_1788 Sun; tRNA and rRNA cytosine-C5-methylases K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D PTH_1754 N6-adenine-specific methylase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D PTH_0881 Uncharacterized protein conserved in bacteria K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D PTH_2915 GidB; predicted S-adenosylmethionine-dependent methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D PTH_1869 predicted S-adenosylmethionine-dependent methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D PTH_0066 predicted methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D PTH_1343 hypothetical protein K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242] D PTH_1197 predicted rRNA methylase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D PTH_0299 SpoU; rRNA methylases K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D PTH_2857 uncharacterized conserved protein K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D PTH_1787 predicted Fe-S-cluster redox enzyme K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D PTH_1518 TrmA; SAM-dependent methyltransferases K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D PTH_1818 RluA; pseudouridylate synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D PTH_0743 RimI; acetyltransferases K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D PTH_1720 RimM; RimM protein, required for 16S rRNA processing K02860 rimM; 16S rRNA processing protein RimM D PTH_1296 MiaB; 2-methylthioadenine synthetase K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4] D PTH_2329 uncharacterized conserved protein K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor D PTH_0880 PrmA; ribosomal protein L11 methylase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] D PTH_0829 CafA; ribonucleases G and E K08301 rng; ribonuclease G [EC:3.1.26.-] D PTH_1065 predicted endonuclease K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D PTH_0296 Uncharacterized protein conserved in bacteria K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-] D PTH_1780 predicted GTPase K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D PTH_1609 predicted GTPase K03977 engA; GTPase D PTH_1716 predicted GTPase K14540 rbgA; ribosome biogenesis GTPase A D PTH_2120 HflX; GTPase K03665 hflX; GTPase D PTH_2828 SUA5; putative translation factor K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D PTH_1045 SpoT; guanosine polyphosphate pyrophosphohydrolases/synthetases K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D PTH_1270 RbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A D PTH_1265 hypothetical protein K09748 rimP; ribosome maturation factor RimP D PTH_0837 Uncharacterized homolog of plant Iojap protein K09710 ybeB; ribosome-associated protein D PTH_0892 predicted metal-dependent hydrolase K07042 ybeY; probable rRNA maturation factor D PTH_2754 ribosome-associated protein Y K05808 hpf; ribosome hibernation promoting factor D PTH_0927 predicted GTPase, probable translation factor K06942 ychF; ribosome-binding ATPase D PTH_1748 predicted metal-binding protein K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:pth03016] D PTH_1236 hypothetical protein K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] D PTH_1582 RtcB; uncharacterized conserved protein K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8] D PTH_1263 ProS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D PTH_1820 IleS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D PTH_0839 LeuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D PTH_0069 MetG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D PTH_2867 GlnS; glutamyl- and glutaminyl-tRNA synthetases K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D PTH_2844 ArgS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D PTH_0263 LysU; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D PTH_1049 AspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D PTH_1060 AlaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D PTH_1061 AlaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D PTH_1420 AsnS; aspartyl/asparaginyl-tRNA synthetases K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D PTH_1956 ThrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D PTH_0013 SerS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D PTH_0295 CysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D PTH_0812 ValS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D PTH_1048 HisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D PTH_1950 PheS; phenylalanyl-tRNA synthetase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D PTH_1949 PheT; phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D PTH_1020 TyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D PTH_1238 TrpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D PTH_1046 Dtd; D-Tyr-tRNAtyr deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D PTH_0884 Hit; diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D PTH_0355 TruA; pseudouridylate synthase K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D PTH_1272 TruB; pseudouridine synthase K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D PTH_0228 NifS; cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D PTH_1054 NifS; cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D PTH_2828 SUA5; putative translation factor K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D PTH_1344 MiaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D PTH_2917 ThdF; predicted GTPase K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D PTH_2916 GidA; NAD/FAD-utilizing enzyme apparently K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D PTH_1848 SelD; selenophosphate synthase K01008 selD; selenide, water dikinase [EC:2.7.9.3] D PTH_2920 RnpA; RNase P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D PTH_0791 Rph; RNase PH K00989 rph; ribonuclease PH [EC:2.7.7.56] D PTH_0904 LigT; 2'-5' RNA ligase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58] D PTH_0899 GlyQ; glycyl-tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D PTH_0900 GlyS; glycyl-tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D PTH_0293 GlnS; glutamyl- and glutaminyl-tRNA synthetases K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24] D PTH_0025 CumB; cytosine/adenosine deaminases K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D PTH_0259 tRNA-dihydrouridine synthase K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D PTH_1338 MiaB; 2-methylthioadenine synthetase K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D PTH_0882 hypothetical protein K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5] D PTH_1247 Gid; NAD(FAD)-utilizing enzyme possibly K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74] D PTH_1719 TrmD; tRNA-(guanine-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D PTH_0913 predicted SAM-dependent methyltransferase K06967 trmK; tRNA (adenine22-N1)-methyltransferase [EC:2.1.1.217] D PTH_2225 CspR; predicted rRNA methylase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D PTH_1951 SpoU; rRNA methylases K03437 spoU; RNA methyltransferase, TrmH family D PTH_1056 TrmU; predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D PTH_2665 MesJ; predicted ATPase K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA D PTH_1735 SirA; predicted redox protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D PTH_0551 SirA; predicted redox protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D PTH_1031 QueA; S-adenosylmethionine:tRNA-ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D PTH_1402 predicted PP-loop superfamily ATPase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D PTH_1403 6-pyruvoyl-tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D PTH_1400 NrdG; organic radical activating enzymes K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D PTH_0967 hypothetical protein K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6] D PTH_1028 Uncharacterized protein conserved in bacteria K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6] D PTH_1294 predicted ATPase K06917 selU; tRNA 2-selenouridine synthase [EC:2.9.1.3] D PTH_1032 Tgt; queuine/archaeosine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D PTH_0197 MesJ; predicted ATPase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D PTH_0742 inactive homolog of metal-dependent proteases K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D PTH_2656 QRI7; metal-dependent proteases K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D PTH_0741 predicted ATPase or kinase K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D PTH_1050 dinucleotide-utilizing enzymes K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase D PTH_1275 Pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:pth03012] D PTH_1269 InfB; translation initiation factor 2 K02519 infB; translation initiation factor IF-2 D PTH_1955 InfC; translation initiation factor 3 K02520 infC; translation initiation factor IF-3 D PTH_1253 Tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts D PTH_0302 TufB; GTPase - translation elongation factors K02358 tuf; elongation factor Tu D PTH_0318 TufB; GTPase - translation elongation factors K02358 tuf; elongation factor Tu D PTH_1395 FusA; translation elongation factors K02355 fusA; elongation factor G D PTH_0317 FusA; translation elongation factors K02355 fusA; elongation factor G D PTH_1427 SelB; selenocysteine-specific translation elongation factor K03833 selB; selenocysteine-specific elongation factor D PTH_2830 PrfA; protein chain release factor A K02835 prfA; peptide chain release factor 1 D PTH_1255 Frr; ribosome recycling factor K02838 frr; ribosome recycling factor D PTH_2829 HemK; methylase of polypeptide chain release factors K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D PTH_0113 PTH; peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D PTH_0343 InfA; translation initiation factor 1 K02518 infA; translation initiation factor IF-1 D PTH_1162 Efp; translation elongation factor P/translation initiation factor 5A K02356 efp; elongation factor P D PTH_2752 PrfB; protein chain release factor B K02836 prfB; peptide chain release factor 2 C 03110 Chaperones and folding catalysts [BR:pth03110] D PTH_2122 ClpA; ATPase with chaperone activity, ATP-binding subunit K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D PTH_0283 ClpA; ATPase with chaperone activity, ATP-binding subunit K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC D PTH_0805 ClpX; ATP-dependent protease Clp, ATPase subunit K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D PTH_1250 HslU; ATP-dependent protease HslVU (ClpYQ), ATPase subunit K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU D PTH_0110 HtpG; molecular chaperone K09488 TRAP1; TNF receptor-associated protein 1 D PTH_0878 DnaK; molecular chaperone K04043 dnaK; molecular chaperone DnaK D PTH_2605 GroL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D PTH_0876 GroL; chaperonin GroEL K22447 cct; archaeal chaperonin D PTH_0879 DnaJ; DnaJ-class molecular chaperone K03686 dnaJ; molecular chaperone DnaJ D PTH_2123 CbpA; DnaJ-class molecular chaperone K05516 cbpA; curved DNA-binding protein D PTH_0877 GrpE; molecular chaperone GrpE K03687 GRPE; molecular chaperone GrpE D PTH_1328 IbpA; molecular chaperone K13993 HSP20; HSP20 family protein D PTH_2124 IbpA; molecular chaperone K13993 HSP20; HSP20 family protein D PTH_2607 GroS; Co-chaperonin GroES K04078 groES; chaperonin GroES D PTH_1883 DegQ; trypsin-like serine proteases K04771 degP; serine protease Do [EC:3.4.21.107] D PTH_0198 HflB; ATP-dependent Zn proteases K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D PTH_1299 HflB; ATP-dependent Zn proteases K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D PTH_2818 AtpB; F0F1-type ATP synthase, subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a D PTH_1694 HybF; Zn finger protein HypA/HybF K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF D PTH_2009 HypB; Ni2+-binding GTPase K04652 hypB; hydrogenase nickel incorporation protein HypB D PTH_0118 SurA; parvulin-like peptidyl-prolyl isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] D PTH_1051 TrxA; thiol-disulfide isomerase and thioredoxins K03671 TXN; thioredoxin D PTH_1606 GrxC; glutaredoxin and related proteins K03676 grxC; glutaredoxin 3 D PTH_2389 GrxC; glutaredoxin and related proteins K03676 grxC; glutaredoxin 3 C 04131 Membrane trafficking [BR:pth04131] D PTH_0199 Ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D PTH_2723 GapA; glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D PTH_1007 GapA; glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D PTH_2214 PykF; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] C 04121 Ubiquitin system [BR:pth04121] C 03051 Proteasome [BR:pth03051] C 03032 DNA replication proteins [BR:pth03032] D PTH_2601 RnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D PTH_2453 RnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D PTH_0121 HimA; bacterial nucleoid DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D PTH_2491 HimA; bacterial nucleoid DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D PTH_2502 HimA; bacterial nucleoid DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D PTH_0001 DnaA; ATPase K02313 dnaA; chromosomal replication initiator protein D PTH_2885 DnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D PTH_2165 DnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D PTH_2506 hypothetical protein K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D PTH_1010 hypothetical protein K02315 dnaC; DNA replication protein DnaC D PTH_2166 DnaC; DNA replication protein K02315 dnaC; DNA replication protein DnaC D PTH_0906 DnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D PTH_2891 Ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D PTH_2220 DnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D PTH_0002 DnaN; DNA polymerase sliding clamp subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D PTH_0867 HolA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D PTH_0063 DnaX; DNA polymerase III, gamma/tau subunits K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D PTH_0051 XerD; DNA polymerase III, gamma/tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D PTH_1708 RnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D PTH_1976 PolA; DNA polymerase I - 3'-5' exonuclease and polymerase domains K02335 polA; DNA polymerase I [EC:2.7.7.7] D PTH_2527 Lig; NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D PTH_1936 Dam; site-specific DNA methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D PTH_2695 hypothetical protein K06223 dam; DNA adenine methylase [EC:2.1.1.72] D PTH_0008 GyrA; type IIA topoisomerase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D PTH_0005 GyrB; type IIA topoisomerase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D PTH_1246 TopA; topoisomerase IA K03168 topA; DNA topoisomerase I [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:pth03036] D PTH_1738 Rnc; dsRNA-specific ribonuclease K03685 rnc; ribonuclease III [EC:3.1.26.3] D PTH_0121 HimA; bacterial nucleoid DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D PTH_2491 HimA; bacterial nucleoid DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D PTH_2502 HimA; bacterial nucleoid DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D PTH_2123 CbpA; DnaJ-class molecular chaperone K05516 cbpA; curved DNA-binding protein D PTH_0001 DnaA; ATPase K02313 dnaA; chromosomal replication initiator protein D PTH_1345 Hfq; Uncharacterized host factor I protein K03666 hfq; host factor-I protein D PTH_1851 FtsA; actin-like ATPase K03590 ftsA; cell division protein FtsA D PTH_0188 hypothetical membrane protein K13052 divIC; cell division protein DivIC D PTH_2747 FtsE; predicted ATPase K09812 ftsE; cell division transport system ATP-binding protein D PTH_1293 FtsK; DNA segregation ATPase FtsK/SpoIIIE and related proteins K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D PTH_1868 hypothetical membrane protein K03586 ftsL; cell division protein FtsL D PTH_1855 FtsQ; cell division septal protein K03589 ftsQ; cell division protein FtsQ D PTH_1862 FtsW; bacterial cell division membrane protein K03588 ftsW; cell division protein FtsW D PTH_2746 FtsX; cell division protein K09811 ftsX; cell division transport system permease protein D PTH_1850 FtsZ; cell division GTPase K03531 ftsZ; cell division protein FtsZ D PTH_1948 Uncharacterized protein conserved in bacteria K09888 zapA; cell division protein ZapA D PTH_0361 AmiC; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D PTH_0786 hypothetical protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D PTH_0438 AmiC; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D PTH_2007 AmiC; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D PTH_1971 AmiC; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D PTH_1425 AmiC; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D PTH_1330 MinC; septum formation inhibitor K03610 minC; septum site-determining protein MinC D PTH_0821 MinC; septum formation inhibitor K03610 minC; septum site-determining protein MinC D PTH_0822 MinD; septum formation inhibitor-activating ATPase K03609 minD; septum site-determining protein MinD D PTH_0823 MinE; septum formation topological specificity factor K03608 minE; cell division topological specificity factor D PTH_1824 DivIVA; cell division initiation protein K04074 divIVA; cell division initiation protein D PTH_1827 hypothetical protein K09772 sepF; cell division inhibitor SepF D PTH_2799 MreB; actin-like ATPase K03569 mreB; rod shape-determining protein MreB and related proteins D PTH_0817 MreB; actin-like ATPase K03569 mreB; rod shape-determining protein MreB and related proteins D PTH_0818 MreC; cell shape-determining protein K03570 mreC; rod shape-determining protein MreC D PTH_0819 MreD; cell shape-determining protein K03571 mreD; rod shape-determining protein MreD D PTH_0824 FtsW; bacterial cell division membrane protein K05837 rodA; rod shape determining protein RodA D PTH_2914 Soj; ATPase K03496 parA; chromosome partitioning protein D PTH_2199 Soj; ATPase K03496 parA; chromosome partitioning protein D PTH_2913 Spo0J; predicted transcriptional regulator K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D PTH_2916 GidA; NAD/FAD-utilizing enzyme apparently K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D PTH_2915 GidB; predicted S-adenosylmethionine-dependent methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D PTH_1247 Gid; NAD(FAD)-utilizing enzyme possibly K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74] D PTH_1248 XerD; site-specific recombinase XerD K03733 xerC; integrase/recombinase XerC D PTH_1210 XerD; site-specific recombinase XerD K04763 xerD; integrase/recombinase XerD D PTH_0213 hypothetical protein K04763 xerD; integrase/recombinase XerD D PTH_2135 XerC; integrase K04763 xerD; integrase/recombinase XerD D PTH_2658 XerD; site-specific recombinase K04763 xerD; integrase/recombinase XerD D PTH_1912 XerC; integrase K04763 xerD; integrase/recombinase XerD D PTH_2451 hypothetical integrase K04763 xerD; integrase/recombinase XerD D PTH_2295 XerC; integrase K04763 xerD; integrase/recombinase XerD D PTH_1432 hypothetical protein K04763 xerD; integrase/recombinase XerD D PTH_0120 conserved protein K02499 yabN; tetrapyrrole methylase family protein / MazG family protein D PTH_1695 Mrp; ATPase K03593 mrp; ATP-binding protein involved in chromosome partitioning D PTH_2635 Mrp; ATPase involved in chromosome partitioning K03593 mrp; ATP-binding protein involved in chromosome partitioning D PTH_2455 uncharacterized conserved protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D PTH_0808 predicted GTPase K03978 engB; GTP-binding protein D PTH_2727 Uncharacterized protein conserved in bacteria K09762 whiA; cell division protein WhiA C 03400 DNA repair and recombination proteins [BR:pth03400] D PTH_2603 hypothetical protein K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D PTH_1946 Mpg; 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] D PTH_2226 Nth; predicted EndoIII-related endonuclease K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D PTH_2671 ADP-ribose pyrophosphatase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D PTH_0917 MutT; NTP pyrophosphohydrolases K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D PTH_1279 Dut; dUTPase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D PTH_2153 Dut; dUTPase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D PTH_2741 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D PTH_1977 Nei; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D PTH_0942 Nfo; endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D PTH_1043 hypothetical protein K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D PTH_2527 Lig; NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D PTH_1976 PolA; DNA polymerase I - 3'-5' exonuclease and polymerase domains K02335 polA; DNA polymerase I [EC:2.7.7.7] D PTH_2737 UvrA; excinuclease ATPase subunit K03701 uvrA; excinuclease ABC subunit A D PTH_2738 UvrB; helicase subunit of the DNA excision repair complex K03702 uvrB; excinuclease ABC subunit B D PTH_0116 UvrB; helicase subunit of the DNA excision repair complex K03702 uvrB; excinuclease ABC subunit B D PTH_2736 UvrC; nuclease subunit of the excinuclease complex K03703 uvrC; excinuclease ABC subunit C D PTH_2529 UvrD; superfamily I DNA and RNA helicases K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D PTH_0312 RpoB; DNA-directed RNA polymerase, beta subunit/140 kD subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D PTH_0313 RpoC; DNA-directed RNA polymerase, beta' subunit/160 kD subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D PTH_0349 RpoA; DNA-directed RNA polymerase, alpha subunit/40 kD subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D PTH_1794 RpoZ; DNA-directed RNA polymerase, subunit K/omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D PTH_0117 hypothetical protein K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D PTH_1339 MutS; mismatch repair ATPase K03555 mutS; DNA mismatch repair protein MutS D PTH_1939 mismatch repair ATPase K07456 mutS2; DNA mismatch repair protein MutS2 D PTH_1342 MutL; DNA mismatch repair enzyme K03572 mutL; DNA mismatch repair protein MutL D PTH_1182 XseA; exonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D PTH_1193 XseB; exonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D PTH_2220 DnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D PTH_0002 DnaN; DNA polymerase sliding clamp subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D PTH_0867 HolA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D PTH_0063 DnaX; DNA polymerase III, gamma/tau subunits K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D PTH_0051 XerD; DNA polymerase III, gamma/tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D PTH_2891 Ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D PTH_1936 Dam; site-specific DNA methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D PTH_2695 hypothetical protein K06223 dam; DNA adenine methylase [EC:2.1.1.72] D PTH_1301 RecA; RecA/RadA recombinase K03553 recA; recombination protein RecA D PTH_1026 RuvA; holliday junction resolvasome, DNA-binding subunit K03550 ruvA; holliday junction DNA helicase RuvA D PTH_1027 RuvB; holliday junction resolvasome, helicase subunit K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D PTH_1025 RuvC; holliday junction resolvasome, endonuclease subunit K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D PTH_1792 PriA; primosomal protein N' (replication factor Y) - superfamily II helicase K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D PTH_1666 SbcD; DNA repair exonuclease K03547 sbcD; DNA repair protein SbcD/Mre11 D PTH_0285 Sms; predicted ATP-dependent serine protease K04485 radA; DNA repair protein RadA/Sms D PTH_0003 RecF; recombinational DNA repair ATPase K03629 recF; DNA replication and repair protein RecF D PTH_1757 RecG; RecG-like helicase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D PTH_0140 hypothetical protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D PTH_0897 RecO; recombinational DNA repair protein K03584 recO; DNA repair protein RecO (recombination protein O) D PTH_0053 RecR; recombinational DNA repair protein K06187 recR; recombination protein RecR D PTH_1201 RecN; ATPase involved in DNA repair K03631 recN; DNA repair protein RecN (Recombination protein N) D PTH_1664 RecB; ATP-dependent exoDNAse (exonuclease V) beta subunit K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-] D PTH_1665 AddB; ATP-dependentnuclease subunitB K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-] D PTH_1914 Uncharacterized protein K15342 cas1; CRISP-associated protein Cas1 D PTH_2156 holliday junction resolvase K03552 hjr; holliday junction resolvase [EC:3.1.21.10] D PTH_1242 uncharacterized conserved protein K10979 ku; DNA end-binding protein Ku D PTH_1244 predicted eukaryotic-type DNA primase K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] D PTH_1243 CDC9; ATP-dependent DNA ligase K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] D PTH_0008 GyrA; type IIA topoisomerase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D PTH_0005 GyrB; type IIA topoisomerase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D PTH_1246 TopA; topoisomerase IA K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D PTH_0121 HimA; bacterial nucleoid DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D PTH_2491 HimA; bacterial nucleoid DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D PTH_2502 HimA; bacterial nucleoid DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D PTH_1498 DinP; nucleotidyltransferase/DNA polymerase K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D PTH_1353 LexA; SOS-response transcriptional repressors K01356 lexA; repressor LexA [EC:3.4.21.88] D PTH_1471 LexA; SOS-response transcriptional repressors K01356 lexA; repressor LexA [EC:3.4.21.88] D PTH_1947 POL4; DNA polymerase IV, histidinol phosphatase and related hydrolases K02347 polX; DNA polymerase (family X) D PTH_1414 hypothetical protein K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] D PTH_1591 NrdA; Ribonucleotide reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D PTH_1271 exopolyphosphatase-related proteins K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] C 03029 Mitochondrial biogenesis [BR:pth03029] D PTH_1269 InfB; translation initiation factor 2 K02519 infB; translation initiation factor IF-2 D PTH_1955 InfC; translation initiation factor 3 K02520 infC; translation initiation factor IF-3 D PTH_1253 Tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts D PTH_0302 TufB; GTPase - translation elongation factors K02358 tuf; elongation factor Tu D PTH_0318 TufB; GTPase - translation elongation factors K02358 tuf; elongation factor Tu D PTH_1395 FusA; translation elongation factors K02355 fusA; elongation factor G D PTH_0317 FusA; translation elongation factors K02355 fusA; elongation factor G D PTH_0895 Era; GTPase K03595 era; GTPase D PTH_1020 TyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D PTH_0839 LeuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D PTH_1049 AspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D PTH_2844 ArgS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D PTH_2522 GatA; asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D PTH_2521 GatB; asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D PTH_2523 GatC; asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D PTH_2891 Ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D PTH_0878 DnaK; molecular chaperone K04043 dnaK; molecular chaperone DnaK D PTH_0877 GrpE; molecular chaperone GrpE K03687 GRPE; molecular chaperone GrpE D PTH_2605 GroL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D PTH_2607 GroS; Co-chaperonin GroES K04078 groES; chaperonin GroES D PTH_0879 DnaJ; DnaJ-class molecular chaperone K03686 dnaJ; molecular chaperone DnaJ D PTH_0228 NifS; cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D PTH_1054 NifS; cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D PTH_1695 Mrp; ATPase K03593 mrp; ATP-binding protein involved in chromosome partitioning D PTH_2635 Mrp; ATPase involved in chromosome partitioning K03593 mrp; ATP-binding protein involved in chromosome partitioning D PTH_2919 YidC; preprotein translocase subunit YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:pth02000] D PTH_1520 Uup; ATPase components of ABC transporters K18231 msr; macrolide transport system ATP-binding/permease protein D PTH_0675 ModA; ABC-type molybdate transport system, periplasmic component K02020 modA; molybdate transport system substrate-binding protein D PTH_0841 ModA; ABC-type molybdate transport system, periplasmic component K02020 modA; molybdate transport system substrate-binding protein D PTH_0676 ModC; ABC-type molybdate transport system, permease component K02018 modB; molybdate transport system permease protein D PTH_0842 CysU; ABC-type sulfate transport system, permease component K02018 modB; molybdate transport system permease protein D PTH_0677 ModC; ABC-type molybdate transport system, ATPase component K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D PTH_0843 CysA; ABC-type sulfate/molybdate transport systems, ATPase component K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D PTH_0602 TupB; ABC-type tungstate transport system, permease component K05772 tupA; tungstate transport system substrate-binding protein D PTH_0603 TupB; ABC-type tungstate transport system, permease component K05772 tupA; tungstate transport system substrate-binding protein D PTH_2624 TupA; ABC-type tungstate transport system, periplasmic component K05773 tupB; tungstate transport system permease protein D PTH_2265 CysU; ABC-type sulfate transport system, permease component K05773 tupB; tungstate transport system permease protein D PTH_0471 CbiO; ABC-type cobalt transport system, ATPase component K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6] D PTH_2264 CysA; ABC-type sulfate/molybdate transport systems, ATPase component K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6] D PTH_0235 TauA; ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic components K15553 ssuA; sulfonate transport system substrate-binding protein D PTH_0237 TauC; ABC-type nitrate/sulfonate/bicarbonate transport systemM permease component K15554 ssuC; sulfonate transport system permease protein D PTH_0236 TauB; ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D PTH_1684 RbsB; ABC-type sugar transport system, periplasmic component K10439 rbsB; ribose transport system substrate-binding protein D PTH_1683 AraH; ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components K10440 rbsC; ribose transport system permease protein D PTH_1682 MglA; ABC-type sugar transport system, ATPase component K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D PTH_1671 PstS; ABC-type phosphate transport system, permease component K02040 pstS; phosphate transport system substrate-binding protein D PTH_1673 PstC; ABC-type phosphate transport system, permease component K02037 pstC; phosphate transport system permease protein D PTH_1674 PstA; ABC-type phosphate transport system, permease component K02038 pstA; phosphate transport system permease protein D PTH_1677 PstB; ABC-type phosphate transport system, ATPase component K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D PTH_2331 HisJ; ABC-type amino acid transport/signal transduction system K17077 artQ; arginine/lysine/histidine transport system permease protein D PTH_2330 GlnQ; ABC-type polar amino acid transport system, ATPase component K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1] D PTH_2296 LivK; ABC-type branched-chain amino acid transport systems, periplasmic component K01999 livK; branched-chain amino acid transport system substrate-binding protein D PTH_0077 LivK; ABC-type branched-chain amino acid transport systems, periplasmic component K01999 livK; branched-chain amino acid transport system substrate-binding protein D PTH_0458 LivK; ABC-type branched-chain amino acid transport systems, periplasmic component K01999 livK; branched-chain amino acid transport system substrate-binding protein D PTH_2351 LivK; ABC-type branched-chain amino acid transport systems, periplasmic component K01999 livK; branched-chain amino acid transport system substrate-binding protein D PTH_2280 LivK; ABC-type branched-chain amino acid transport systems, periplasmic component K01999 livK; branched-chain amino acid transport system substrate-binding protein D PTH_2290 LivK; ABC-type branched-chain amino acid transport systems, periplasmic component K01999 livK; branched-chain amino acid transport system substrate-binding protein D PTH_2382 LivK; ABC-type branched-chain amino acid transport systems, periplasmic component K01999 livK; branched-chain amino acid transport system substrate-binding protein D PTH_0076 LivH; branched-chain amino acid ABC-type transport system, permease components K01997 livH; branched-chain amino acid transport system permease protein D PTH_2350 LivH; branched-chain amino acid ABC-type transport system, permease components K01997 livH; branched-chain amino acid transport system permease protein D PTH_0459 LivH; branched-chain amino acid ABC-type transport system, permease components K01997 livH; branched-chain amino acid transport system permease protein D PTH_0075 LivM; ABC-type branched-chain amino acid transport system, permease component K01998 livM; branched-chain amino acid transport system permease protein D PTH_0460 LivM; ABC-type branched-chain amino acid transport system, permeasecomponent K01998 livM; branched-chain amino acid transport system permease protein D PTH_0074 LivG; ABC-type branched-chain amino acid transport systems, ATPase component K01995 livG; branched-chain amino acid transport system ATP-binding protein D PTH_2348 LivG; ABC-type branched-chain amino acid transport systems, ATPase component K01995 livG; branched-chain amino acid transport system ATP-binding protein D PTH_0461 LivG; ABC-type branched-chain amino acid transport systems, ATPase component K01995 livG; branched-chain amino acid transport system ATP-binding protein D PTH_2279 LivG; ABC-type branched-chain amino acid transport systems, ATPase component K01995 livG; branched-chain amino acid transport system ATP-binding protein D PTH_0462 LivF; ABC-type branched-chain amino acid transport systems, ATPase component K01996 livF; branched-chain amino acid transport system ATP-binding protein D PTH_0073 LivF; ABC-type branched-chain amino acid transport systems, ATPase component K01996 livF; branched-chain amino acid transport system ATP-binding protein D PTH_0941 DdpA; ABC-type dipeptide transport system, periplasmic component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D PTH_1488 DdpA; ABC-type dipeptide transport system, periplasmic component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D PTH_1487 DppB; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K02033 ABC.PE.P; peptide/nickel transport system permease protein D PTH_1486 DppC; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K02034 ABC.PE.P1; peptide/nickel transport system permease protein D PTH_1485 ATPase components of various ABC-type transport systems, contain duplicated ATPase K02031 ddpD; peptide/nickel transport system ATP-binding protein D PTH_1382 LraI; ABC-type metal ion transport system, periplasmic component/surface adhesin K09815 znuA; zinc transport system substrate-binding protein D PTH_1380 ZnuB; ABC-type Mn2+/Zn2+ transport systems, permease components K09816 znuB; zinc transport system permease protein D PTH_1381 ZnuC; ABC-type Mn/Zn transport systems, ATPase component K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D PTH_1958 hypothetical protein K02009 cbiN; cobalt/nickel transport protein D PTH_1655 CbiQ; ABC-type cobalt transport system, permease component CbiQ and related transporters K02008 cbiQ; cobalt/nickel transport system permease protein D PTH_0950 CbiQ; ABC-type cobalt transport system, permease component CbiQ and related transporters K02008 cbiQ; cobalt/nickel transport system permease protein D PTH_1959 CbiM; ABC-type Co2+ transport system, permease component K02007 cbiM; cobalt/nickel transport system permease protein D PTH_0949 CbiM; ABC-type Co2+ transport system, permease component K02007 cbiM; cobalt/nickel transport system permease protein D PTH_0951 cobalamin biosynthesis protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein D PTH_1654 CbiO; ABC-type cobalt transport system, ATPase component K02006 cbiO; cobalt/nickel transport system ATP-binding protein D PTH_0256 hypothetical membrane protein K03523 bioY; biotin transport system substrate-specific component D PTH_1478 predicted membrane protein K16927 cbrT; energy-coupling factor transport system substrate-specific component D PTH_0354 CbiQ; ABC-type cobalt transport system, permease component CbiQ and related transporters K16785 ecfT; energy-coupling factor transport system permease protein D PTH_1659 CbiQ; ABC-type cobalt transport system, permease component CbiQ and related transporters K16785 ecfT; energy-coupling factor transport system permease protein D PTH_1480 CbiQ; ABC-type cobalt transport system, permease component CbiQ and related transporters K16785 ecfT; energy-coupling factor transport system permease protein D PTH_0351 CbiO; ABC-type cobalt transport system, ATPase component K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D PTH_1657 CbiO; ABC-type cobalt transport system, ATPase component K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D PTH_0352 CbiO; ABC-type cobalt transport system, ATPase component K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D PTH_1658 CbiO; ABC-type cobalt transport system, ATPase component K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D PTH_1479 CbiO; ABC-type cobalt transport system, ATPase component K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D PTH_2576 TagG; ABC-type polysaccharide/polyol phosphate export systems, permease component K09690 wzm; homopolymeric O-antigen transport system permease protein D PTH_2575 TagH; ABC-type polysaccharide/polyol phosphate transport system, ATPase component K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14] D PTH_1374 TagG; ABC-type polysaccharide/polyolphosphate export systems, permeasecomponent K09694 nodJ; lipooligosaccharide transport system permease protein D PTH_1375 CcmA; ABC-type multidrug transport system, ATPase component K09695 nodI; lipooligosaccharide transport system ATP-binding protein D PTH_1514 ABC-type multidrug transport system, permease component K25181 ybhS; drug efflux transport system permease protein D PTH_1516 CcmA; ABC-type multidrug transport system, ATPase component K25182 ybhF; drug efflux transport system ATP-binding protein D PTH_1515 CcmA; ABC-type multidrug transport system, ATPase component K25182 ybhF; drug efflux transport system ATP-binding protein D PTH_1517 AcrA; membrane-fusion protein K25183 ybhG; membrane fusion protein YbhG D PTH_2746 FtsX; cell division protein K09811 ftsX; cell division transport system permease protein D PTH_2747 FtsE; predicted ATPase K09812 ftsE; cell division transport system ATP-binding protein D PTH_0776 TagG; ABC-type polysaccharide/polyol phosphate export systems, permease component K01992 ABC-2.P; ABC-2 type transport system permease protein D PTH_2803 ABC-type multidrug transport system, permease component K01992 ABC-2.P; ABC-2 type transport system permease protein D PTH_2804 ABC-type multidrug transport system, permease component K01992 ABC-2.P; ABC-2 type transport system permease protein D PTH_0277 hypothetical membrane protein K01992 ABC-2.P; ABC-2 type transport system permease protein D PTH_0772 hypothetical membrane protein K01992 ABC-2.P; ABC-2 type transport system permease protein D PTH_1475 ABC-type multidrug transport system, permease component K01992 ABC-2.P; ABC-2 type transport system permease protein D PTH_0278 CcmA; ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D PTH_2802 hypothetical protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D PTH_0771 CcmA; ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D PTH_1476 CcmA; ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D PTH_0777 CcmA; ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D PTH_0413 LolE; ABC-type transport system, involved in lipoprotein release, permeasecomponent K02004 ABC.CD.P; putative ABC transport system permease protein D PTH_0039 SalY; ABC-type antimicrobial peptide transport system, permease component K02004 ABC.CD.P; putative ABC transport system permease protein D PTH_1456 SalY; ABC-type antimicrobial peptide transport system, permease component K02004 ABC.CD.P; putative ABC transport system permease protein D PTH_0414 SalX; ABC-type antimicrobial peptide transport system, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D PTH_0038 SalX; ABC-type antimicrobial peptide transport system, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D PTH_1457 SalX; ABC-type antimicrobial peptide transport system, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D PTH_1537 CitT; di- and tricarboxylate transporters K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5 D PTH_1542 CitT; di- and tricarboxylate transporters K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5 D PTH_2422 AraJ; arabinose efflux permease K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter D PTH_2046 ProP; permeases of the major facilitator superfamily K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter D PTH_1574 NarK; nitrate/nitrite transporter K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter D PTH_2316 ProP; permeases of the major facilitator superfamily K13021 ttuB; MFS transporter, ACS family, tartrate transporter D PTH_1371 AraJ; arabinose efflux permease K08221 yitG; MFS transporter, ACDE family, multidrug resistance protein D PTH_2590 AraJ; arabinose efflux permease K08223 fsr; MFS transporter, FSR family, fosmidomycin resistance protein D PTH_2893 hypothetical transporter K08369 ydjE; MFS transporter, putative metabolite:H+ symporter D PTH_0032 UhpC; sugar phosphate permease K08369 ydjE; MFS transporter, putative metabolite:H+ symporter D PTH_1463 Kch; kef-type K+ transport systems, predicted NAD-binding component K10716 kch; voltage-gated potassium channel D PTH_0664 AmtB; ammonia permease K03320 amt; ammonium transporter, Amt family D PTH_2651 FocA; formate/nitrite family of transporters K21993 fdhC; formate transporter D PTH_2903 MscS; small-conductance mechanosensitive channel K22044 ybiO; moderate conductance mechanosensitive channel D PTH_0619 MscS; small-conductance mechanosensitive channel K16052 ynaI; MscS family membrane protein D PTH_2003 hypothetical protein K22112 amiS; putative amide transporter protein D PTH_2119 MotA; flagellar motor component K02556 motA; chemotaxis protein MotA D PTH_2118 MotB; flagellar motor protein K02557 motB; chemotaxis protein MotB D PTH_0448 CorA; Mg2+ and Co2+ transporters K03284 corA; magnesium transporter D PTH_1839 hypothetical membrane protein K06296 gerKB; spore germination protein KB D PTH_0094 predicted divalent heavy-metal cations transporter K07238 TC.ZIP; zinc transporter, ZIP family D PTH_0093 Uncharacterized protein conserved in bacteria K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D PTH_2229 LldP; L-lactate permease K03303 lutP; lactate permease D PTH_1961 ECM27; Ca2+/Na+ antiporter K07301 yrbG; cation:H+ antiporter D PTH_0457 TrkG; trk-type K+ transport systems, membrane components K03498 trkH; trk/ktr system potassium uptake protein D PTH_1952 TrkA; K+ transport systems, NAD-binding component K03499 trkA; trk/ktr system potassium uptake protein D PTH_2271 UraA; xanthine/uracil permeases K16345 xanP; xanthine permease XanP D PTH_2320 permeases K06901 pbuG; adenine/guanine/hypoxanthine permease D PTH_0652 ACR3; arsenite efflux pump ACR3 and related permeases K03325 ACR3; arsenite transporter D PTH_1396 RfbX; membrane protein K06409 spoVB; stage V sporulation protein B D PTH_2761 MviN; Uncharacterized membrane protein K03980 murJ; putative peptidoglycan lipid II flippase D PTH_1108 MviN; Uncharacterized membrane protein K03980 murJ; putative peptidoglycan lipid II flippase D PTH_0542 AzlC; predicted branched-chain amino acid permease K26605 azlC; branched chain amino acid efflux pump D PTH_0543 predicted membrane protein K26606 azlD; branched chain amino acid efflux pump D PTH_1862 FtsW; bacterial cell division membrane protein K03588 ftsW; cell division protein FtsW D PTH_2827 predicted membrane protein K23242 mntP; manganese efflux pump family protein D PTH_0769 hypothetical membrane protein K03641 tolB; TolB protein D PTH_2716 OVP1; inorganic pyrophosphatase K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1] D PTH_1174 hypothetical protein K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2] D PTH_1364 MmcH; methylmalonyl-CoA decarboxylase, alpha subunit K01604 mmdA; methylmalonyl-CoA decarboxylase subunit alpha [EC:7.2.4.3] D PTH_1366 MmcJ; methylmalonyl-CoA decarboxylase, gamma subunit K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma D PTH_1094 Mrp; ATPase involved in chromosome partitioning K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3] D PTH_1093 capsular polysaccharide biosynthesis protein K19420 epsA; protein tyrosine kinase modulator D PTH_1943 FeoA; Fe2+ transport system protein A K04758 feoA; ferrous iron transport protein A D PTH_1877 FeoB; Fe2+ transport system protein B K04759 feoB; ferrous iron transport protein B D PTH_1941 hypothetical membrane protein K04759 feoB; ferrous iron transport protein B D PTH_2032 SapB; Uncharacterized membrane protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein C 02044 Secretion system [BR:pth02044] D PTH_1134 PulE; type II secretory pathway, ATPase PulE/tfp pilus assembly pathway, ATPase PilB K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D PTH_1144 PulO; type II secretory pathway, prepilin signal peptidase PulO and related peptidases K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D PTH_1145 PulE; type II secretory pathway, ATPase PulE/tfp pilus assembly pathway, ATPase PilB K02652 pilB; type IV pilus assembly protein PilB D PTH_1147 PulF; type II secretory pathway, component PulF K02653 pilC; type IV pilus assembly protein PilC D PTH_1136 PulF; type II secretory pathway, component PulF K02653 pilC; type IV pilus assembly protein PilC D PTH_1149 PilM; tfp pilus assembly protein, ATPase PilM K02662 pilM; type IV pilus assembly protein PilM D PTH_1150 hypothetical membrane protein K02663 pilN; type IV pilus assembly protein PilN D PTH_1151 PilO; tfp pilus assembly protein PilO K02664 pilO; type IV pilus assembly protein PilO D PTH_1143 PilO; tfp pilus assembly protein PilO K02664 pilO; type IV pilus assembly protein PilO D PTH_1153 hypothetical membrane protein K02666 pilQ; type IV pilus assembly protein PilQ D PTH_1135 PilT; tfp pilus assembly protein K02669 pilT; twitching motility protein PilT D PTH_1146 PilT; tfp pilus assembly protein, pilus retraction ATPase PilT K02669 pilT; twitching motility protein PilT D PTH_1446 PulO; type II secretory pathway, prepilin signal peptidase PulO and related peptidases, prepilin signal peptidase PulO and related peptidases K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43] D PTH_1449 CpaB; flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB D PTH_1450 CitB; response regulator K02282 cpaE; pilus assembly protein CpaE D PTH_1451 VirB11; type IV secretory pathway, VirB11 components, and related ATPase K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D PTH_1452 TadC; flp pilus assembly protein TadC K12510 tadB; tight adherence protein B D PTH_1453 TadC; flp pilus assembly protein TadC K12511 tadC; tight adherence protein C D PTH_1445 Flp; flp pilus assembly protein, pilin Flp, pilin Flp K02651 flp; pilus assembly protein Flp/PilA D PTH_1825 predicted integral membrane protein K02221 yggT; YggT family protein D PTH_0854 hypothetical membrane protein K02237 comEA; competence protein ComEA D PTH_2823 ComEB; deoxycytidylate deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12] D PTH_0857 ComEC; predicted hydrolase K02238 comEC; competence protein ComEC D PTH_2401 ComEC; predicted hydrolase K02238 comEC; competence protein ComEC D PTH_0567 ComEC; predicted hydrolase K02238 comEC; competence protein ComEC D PTH_0257 hypothetical protein K02241 comFB; competence protein ComFB D PTH_2072 FlhA; flagellar biosynthesis pathway, component FlhA K02400 flhA; flagellar biosynthesis protein FlhA D PTH_2073 FlhB; flagellar biosynthesis pathway, component FlhB K02401 flhB; flagellar biosynthesis protein FlhB D PTH_0463 Uncharacterized homolog of the cytoplasmic domain of flagellar protein FhlB K04061 flhB2; flagellar biosynthesis protein D PTH_2089 FliF; flagellar biosynthesis/type III secretory pathway lipoprotein K02409 fliF; flagellar M-ring protein FliF D PTH_2087 FliH; flagellar biosynthesis/type III secretory pathway protein K02411 fliH; flagellar assembly protein FliH D PTH_2085 FliI; flagellar biosynthesis/type III secretory pathway ATPase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D PTH_2060 FliY; flagellum motor switch protein K02417 fliN; flagellar motor switch protein FliN D PTH_2078 FliN; flagellar motor switch/type III secretory pathway protein K02417 fliN; flagellar motor switch protein FliN D PTH_2077 FliO; flagellar biogenesis protein K02418 fliO; flagellar protein FliO/FliZ D PTH_2076 FliP; flagellar biosynthesis pathway, component FliP K02419 fliP; flagellar biosynthesis protein FliP D PTH_2075 FliQ; flagellar biosynthesis pathway, component FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D PTH_2074 FliR; flagellar biosynthesis pathway, component FliR K02421 fliR; flagellar biosynthesis protein FliR D PTH_2488 VirD4; type IV secretory pathway, VirD4 components K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8] D PTH_2753 SecA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D PTH_1035 SecD; preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D PTH_0304 hypothetical membrane protein K03073 secE; preprotein translocase subunit SecE D PTH_1036 SecF; preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D PTH_2717 hypothetical membrane protein K03075 secG; preprotein translocase subunit SecG D PTH_0340 SecY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D PTH_1724 Ffh; signal recognition particle GTPase K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D PTH_1737 FtsY; signal recognition particle GTPase K03110 ftsY; fused signal recognition particle receptor D PTH_1033 YajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D PTH_2919 YidC; preprotein translocase subunit YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D PTH_1715 TatA; Sec-independent protein secretion pathway components K03116 tatA; sec-independent protein translocase protein TatA D PTH_1709 TatA; Sec-independent protein secretion pathway components K03116 tatA; sec-independent protein translocase protein TatA D PTH_1710 TatC; Sec-independent protein secretion pathway component TatC K03118 tatC; sec-independent protein translocase protein TatC C 02042 Bacterial toxins [BR:pth02042] D PTH_1370 hypothetical protein K01114 plc; phospholipase C [EC:3.1.4.3] C 02022 Two-component system [BR:pth02022] D PTH_1830 VicK; signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D PTH_1831 OmpR; response regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP D PTH_1670 OmpR; response regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP D PTH_0048 OmpR; response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D PTH_0245 hypothetical protein K07775 resD; two-component system, OmpR family, response regulator ResD D PTH_2685 OmpR; response regulator K07775 resD; two-component system, OmpR family, response regulator ResD D PTH_0450 OmpR; response regulator K07669 mprA; two-component system, OmpR family, response regulator MprA D PTH_0143 OmpR; response regulator K07670 mtrA; two-component system, OmpR family, response regulator MtrA D PTH_2387 OmpR; response regulator K07670 mtrA; two-component system, OmpR family, response regulator MtrA D PTH_0036 hypothetical membrane-associated sensory histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D PTH_0451 BaeS; signal transduction histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D PTH_0035 OmpR; response regulator K02483 K02483; two-component system, OmpR family, response regulator D PTH_1443 sensor protein DegS and signal transduction histidine kinase K07777 degS; two-component system, NarL family, sensor histidine kinase DegS [EC:2.7.13.3] D PTH_1444 CitB; response regulator K07692 degU; two-component system, NarL family, response regulator DegU D PTH_1778 membrane signaling protein K07698 kinC; two-component system, sporulation sensor kinase C [EC:2.7.13.3] D PTH_2840 CheY; FOG: CheY-like receiver K02490 spo0F; two-component system, response regulator, stage 0 sporulation protein F D PTH_0740 CheY; FOG: CheY-like receiver K02490 spo0F; two-component system, response regulator, stage 0 sporulation protein F D PTH_1203 CitB; response regulator K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A D PTH_1349 CitA; signal transduction histidine kinase K11691 K11691; two-component system, CitB family, sensor histidine kinase DctS [EC:2.7.13.3] D PTH_1350 CitB; response regulator K11692 K11692; two-component system, CitB family, response regulator DctR D PTH_0654 hypothetical regulator protein K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3] D PTH_0655 LytT; response regulator K02477 K02477; two-component system, LytTR family, response regulator D PTH_2257 BaeS; signal transduction histidine kinase K07710 atoS; two-component system, NtrC family, sensor histidine kinase AtoS [EC:2.7.13.3] D PTH_2258 AtoC; response regulator K07714 atoC; two-component system, NtrC family, response regulator AtoC D PTH_2640 hypothetical signal transduction histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D PTH_2639 AtoC; response regulator K02481 flgR; two-component system, NtrC family, response regulator D PTH_2116 CheA; chemotaxis protein histidine kinase and related kinases K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D PTH_2062 CheY; FOG: CheY-like receiver K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D PTH_2115 CheB; chemotaxis replicative DNA helicase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D PTH_2386 BaeS; signal transduction histidine kinase K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3] D PTH_0730 AmiR; response regulator K22010 pdtaR; two-component system, response regulator PdtaR D PTH_0727 AmiR; response regulator K22010 pdtaR; two-component system, response regulator PdtaR C 02035 Bacterial motility proteins [BR:pth02035] D PTH_2116 CheA; chemotaxis protein histidine kinase and related kinases K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D PTH_2117 CheW; chemotaxis signal transduction protein K03408 cheW; purine-binding chemotaxis protein CheW D PTH_2063 CheC; chemotaxis protein CheC K03410 cheC; chemotaxis protein CheC D PTH_2065 CheD; chemotaxis protein K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D PTH_2064 CheR; methylase of chemotaxis methyl-accepting proteins K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D PTH_2115 CheB; chemotaxis replicative DNA helicase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D PTH_2062 CheY; FOG: CheY-like receiver K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D PTH_0006 hypothetical membrane protein K03406 mcp; methyl-accepting chemotaxis protein D PTH_2588 Tar; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D PTH_2855 Tar; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D PTH_2087 FliH; flagellar biosynthesis/type III secretory pathway protein K02411 fliH; flagellar assembly protein FliH D PTH_2085 FliI; flagellar biosynthesis/type III secretory pathway ATPase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D PTH_2084 FliJ; flagellar biosynthesis chaperone K02413 fliJ; flagellar protein FliJ D PTH_2077 FliO; flagellar biogenesis protein K02418 fliO; flagellar protein FliO/FliZ D PTH_2076 FliP; flagellar biosynthesis pathway, component FliP K02419 fliP; flagellar biosynthesis protein FliP D PTH_2075 FliQ; flagellar biosynthesis pathway, component FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D PTH_2074 FliR; flagellar biosynthesis pathway, component FliR K02421 fliR; flagellar biosynthesis protein FliR D PTH_2072 FlhA; flagellar biosynthesis pathway, component FlhA K02400 flhA; flagellar biosynthesis protein FlhA D PTH_2073 FlhB; flagellar biosynthesis pathway, component FlhB K02401 flhB; flagellar biosynthesis protein FlhB D PTH_2088 FliG; flagellar motor switch protein K02410 fliG; flagellar motor switch protein FliG D PTH_2061 FliM; flagellar motor switch protein K02416 fliM; flagellar motor switch protein FliM D PTH_2060 FliY; flagellum motor switch protein K02417 fliN; flagellar motor switch protein FliN D PTH_2078 FliN; flagellar motor switch/type III secretory pathway protein K02417 fliN; flagellar motor switch protein FliN D PTH_2089 FliF; flagellar biosynthesis/type III secretory pathway lipoprotein K02409 fliF; flagellar M-ring protein FliF D PTH_2079 FliL; flagellar basal body-associated protein K02415 fliL; flagellar protein FliL D PTH_2090 FliE; flagellar hook-basal body protein K02408 fliE; flagellar hook-basal body complex protein FliE D PTH_2083 hypothetical protein K02414 fliK; flagellar hook-length control protein FliK D PTH_2092 FlgB; flagellar basal body protein K02387 flgB; flagellar basal-body rod protein FlgB D PTH_2091 FlgC; flagellar basal body rod protein K02388 flgC; flagellar basal-body rod protein FlgC D PTH_2082 FlgD; flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD D PTH_2067 FlgE; flagellar hook protein FlgE K02391 flgF; flagellar basal-body rod protein FlgF D PTH_2066 FlgG; flagellar basal body rod protein K02392 flgG; flagellar basal-body rod protein FlgG D PTH_2080 FlgG; flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE D PTH_2112 FlgK; flagellar hook-associated protein K02396 flgK; flagellar hook-associated protein 1 D PTH_2111 FlgL; flagellin and related hook-associated proteins K02397 flgL; flagellar hook-associated protein 3 FlgL D PTH_2102 FliC; flagellin K02406 fliC; flagellin D PTH_2096 FliD; flagellar capping protein K02407 fliD; flagellar hook-associated protein 2 D PTH_2095 FliS; flagellin-specific chaperone FliS K02422 fliS; flagellar secretion chaperone FliS D PTH_2068 FliA; DNA-directed RNA polymerase specialized sigma subunit K02405 fliA; RNA polymerase sigma factor FliA D PTH_2119 MotA; flagellar motor component K02556 motA; chemotaxis protein MotA D PTH_2118 MotB; flagellar motor protein K02557 motB; chemotaxis protein MotB D PTH_2097 Uncharacterized protein conserved in bacteria K13626 fliW; flagellar assembly factor FliW D PTH_2114 FlgM; negative regulator of flagellin synthesis K02398 flgM; negative regulator of flagellin synthesis FlgM D PTH_2093 FlaG; Uncharacterized flagellar protein FlaG K06603 flaG; flagellar protein FlaG D PTH_2071 FlhF; flagellar GTP-binding protein K02404 flhF; flagellar biosynthesis protein FlhF D PTH_2070 ATPase K04562 flhG; flagellar biosynthesis protein FlhG D PTH_1135 PilT; tfp pilus assembly protein K02669 pilT; twitching motility protein PilT D PTH_1146 PilT; tfp pilus assembly protein, pilus retraction ATPase PilT K02669 pilT; twitching motility protein PilT D PTH_1145 PulE; type II secretory pathway, ATPase PulE/tfp pilus assembly pathway, ATPase PilB K02652 pilB; type IV pilus assembly protein PilB D PTH_1147 PulF; type II secretory pathway, component PulF K02653 pilC; type IV pilus assembly protein PilC D PTH_1136 PulF; type II secretory pathway, component PulF K02653 pilC; type IV pilus assembly protein PilC D PTH_1144 PulO; type II secretory pathway, prepilin signal peptidase PulO and related peptidases K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D PTH_1153 hypothetical membrane protein K02666 pilQ; type IV pilus assembly protein PilQ D PTH_1151 PilO; tfp pilus assembly protein PilO K02664 pilO; type IV pilus assembly protein PilO D PTH_1143 PilO; tfp pilus assembly protein PilO K02664 pilO; type IV pilus assembly protein PilO D PTH_1150 hypothetical membrane protein K02663 pilN; type IV pilus assembly protein PilN D PTH_1149 PilM; tfp pilus assembly protein, ATPase PilM K02662 pilM; type IV pilus assembly protein PilM D PTH_1445 Flp; flp pilus assembly protein, pilin Flp, pilin Flp K02651 flp; pilus assembly protein Flp/PilA D PTH_1446 PulO; type II secretory pathway, prepilin signal peptidase PulO and related peptidases, prepilin signal peptidase PulO and related peptidases K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43] D PTH_1449 CpaB; flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB D PTH_1450 CitB; response regulator K02282 cpaE; pilus assembly protein CpaE D PTH_1451 VirB11; type IV secretory pathway, VirB11 components, and related ATPase K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:pth04812] D PTH_0467 hypothetical protein K06990 MEMO1; MEMO1 family protein D PTH_2799 MreB; actin-like ATPase K03569 mreB; rod shape-determining protein MreB and related proteins D PTH_0817 MreB; actin-like ATPase K03569 mreB; rod shape-determining protein MreB and related proteins D PTH_1850 FtsZ; cell division GTPase K03531 ftsZ; cell division protein FtsZ D PTH_1851 FtsA; actin-like ATPase K03590 ftsA; cell division protein FtsA D PTH_1330 MinC; septum formation inhibitor K03610 minC; septum site-determining protein MinC D PTH_0821 MinC; septum formation inhibitor K03610 minC; septum site-determining protein MinC D PTH_0822 MinD; septum formation inhibitor-activating ATPase K03609 minD; septum site-determining protein MinD D PTH_0823 MinE; septum formation topological specificity factor K03608 minE; cell division topological specificity factor D PTH_2914 Soj; ATPase K03496 parA; chromosome partitioning protein D PTH_2199 Soj; ATPase K03496 parA; chromosome partitioning protein D PTH_2913 Spo0J; predicted transcriptional regulator K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:pth04147] D PTH_2718 hypothetical protein K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D PTH_2719 hypothetical protein K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D PTH_2723 GapA; glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D PTH_1007 GapA; glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D PTH_2722 Pgk; 3-phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D PTH_2214 PykF; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D PTH_1306 Zn-dependent dipeptidase, microsomal dipeptidase homolog K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D PTH_2605 GroL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D PTH_0878 DnaK; molecular chaperone K04043 dnaK; molecular chaperone DnaK D PTH_2731 hypothetical protein K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D PTH_1318 hypothetical protein K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D PTH_0302 TufB; GTPase - translation elongation factors K02358 tuf; elongation factor Tu D PTH_0318 TufB; GTPase - translation elongation factors K02358 tuf; elongation factor Tu D PTH_0884 Hit; diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D PTH_0747 Mdh; malate/lactate dehydrogenases K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D PTH_1376 CaiC; acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D PTH_1890 CaiC; acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D PTH_0270 PaaJ; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D PTH_1729 SAM1; S-adenosylhomocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D PTH_1418 Adk; adenylate kinase and related kinases K00939 adk; adenylate kinase [EC:2.7.4.3] D PTH_1044 Apt; adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D PTH_0517 ArgH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D PTH_0507 ArgG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D PTH_0733 GlnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PTH_0909 GlnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PTH_2298 GlnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PTH_0731 GlnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PTH_0975 HemB; delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D PTH_0200 MIS1; formyltetrahydrofolate synthetase K00288 MTHFD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase / formyltetrahydrofolate synthetase [EC:1.5.1.5 3.5.4.9 6.3.4.3] D PTH_0012 SerA; phosphoglycerate dehydrogenase and related dehydrogenases K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D PTH_2541 PurH; AICAR transformylase/IMP cyclohydrolase PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D PTH_1553 FixB; electron transfer flavoprotein, alpha subunit K03522 fixB; electron transfer flavoprotein alpha subunit D PTH_2002 FixB; electron transfer flavoprotein, alpha subunit K03522 fixB; electron transfer flavoprotein alpha subunit D PTH_2431 FixB; electron transfer flavoprotein, alpha subunit K03522 fixB; electron transfer flavoprotein alpha subunit D PTH_0017 FixB; electron transfer flavoprotein, alpha subunit K03522 fixB; electron transfer flavoprotein alpha subunit D PTH_0597 FixB; electron transfer flavoprotein, alpha subunit K03522 fixB; electron transfer flavoprotein alpha subunit D PTH_1767 FixB; electron transfer flavoprotein, alpha subunit K03522 fixB; electron transfer flavoprotein alpha subunit D PTH_2721 TpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] C 02048 Prokaryotic defense system [BR:pth02048] D PTH_1914 Uncharacterized protein K15342 cas1; CRISP-associated protein Cas1 D PTH_1913 Uncharacterized protein K09951 cas2; CRISPR-associated protein Cas2 D PTH_1989 Uncharacterized protein K09951 cas2; CRISPR-associated protein Cas2 D PTH_1994 predicted helicases K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] D PTH_1916 predicted helicases K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] D PTH_1915 RecB family exonuclease K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] D PTH_1990 Uncharacterized protein K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] D PTH_1922 Uncharacterized protein K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-] D PTH_1921 Uncharacterized protein K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-] D PTH_1918 Uncharacterized protein K19115 csh2; CRISPR-associated protein Csh2 D PTH_1917 hypothetical protein K19116 cas5h; CRISPR-associated protein Cas5h D PTH_1992 hypothetical protein K19117 csd1; CRISPR-associated protein Csd1 D PTH_1991 Uncharacterized protein K19118 csd2; CRISPR-associated protein Csd2 D PTH_1993 hypothetical protein K19119 cas5d; CRISPR-associated protein Cas5d D PTH_1926 Uncharacterized protein K07061 cmr1; CRISPR-associated protein Cmr1 D PTH_0707 hypothetical protein K07061 cmr1; CRISPR-associated protein Cmr1 D PTH_1928 predicted hydrolase K19076 cmr2; CRISPR-associated protein Cmr2 D PTH_0708 hypothetical protein K19076 cmr2; CRISPR-associated protein Cmr2 D PTH_1927 Uncharacterized protein K09127 cmr3; CRISPR-associated protein Cmr3 D PTH_1925 Uncharacterized protein K09000 cmr4; CRISPR-associated protein Cmr4 D PTH_0712 Uncharacterized protein K09000 cmr4; CRISPR-associated protein Cmr4 D PTH_1924 Uncharacterized protein K19141 cmr5; CRISPR-associated protein Cmr5 D PTH_1923 Uncharacterized protein K19142 cmr6; CRISPR-associated protein Cmr6 D PTH_2701 hypothetical protein K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D PTH_2702 hypothetical protein K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D PTH_1936 Dam; site-specific DNA methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D PTH_2695 hypothetical protein K06223 dam; DNA adenine methylase [EC:2.1.1.72] D PTH_0756 DNA modification methylase K24451 zim; modification methylase D PTH_0152 restriction endonuclease K01156 res; type III restriction enzyme [EC:3.1.21.5] D PTH_0217 hypothetical protein K01156 res; type III restriction enzyme [EC:3.1.21.5] D PTH_1522 Uncharacterized protein conserved in bacteria K01156 res; type III restriction enzyme [EC:3.1.21.5] D PTH_0151 Mod; adenine specific DNA methylase Mod K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D PTH_1523 adenine specific DNA methylase Mod K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D PTH_0216 Mod; adenine specific DNA methylase Mod K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D PTH_2103 predicted endonuclease K07448 mrr; restriction system protein D PTH_2666 hypothetical protein K07448 mrr; restriction system protein D PTH_0862 hypothetical protein K07448 mrr; restriction system protein D PTH_0753 MazF; growth inhibitor K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D PTH_0738 MazF; growth inhibitor K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D PTH_0737 hypothetical protein K07723 ndoAI; CopG family transcriptional regulator / antitoxin EndoAI D PTH_0702 hypothetical protein K19156 prlF; antitoxin PrlF D PTH_0397 RelE; cytotoxic translational repressor K06218 relE; mRNA interferase RelE/StbE D PTH_0033 hypothetical protein K06218 relE; mRNA interferase RelE/StbE D PTH_0476 hypothetical protein K19159 yefM; antitoxin YefM D PTH_2782 uncharacterized conserved protein K18843 hicB; antitoxin HicB D PTH_1527 hypothetical protein K19165 phd; antitoxin Phd D PTH_1850 FtsZ; cell division GTPase K03531 ftsZ; cell division protein FtsZ D PTH_2799 MreB; actin-like ATPase K03569 mreB; rod shape-determining protein MreB and related proteins D PTH_0817 MreB; actin-like ATPase K03569 mreB; rod shape-determining protein MreB and related proteins D PTH_0228 NifS; cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D PTH_1054 NifS; cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules [BR:pth04090] C 01504 Antimicrobial resistance genes [BR:pth01504] D PTH_1520 Uup; ATPase components of ABC transporters K18231 msr; macrolide transport system ATP-binding/permease protein C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:pth00537] D PTH_1306 Zn-dependent dipeptidase, microsomal dipeptidase homolog K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:pth03100] D PTH_t041 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D PTH_t022 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D PTH_t008 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D PTH_t027 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D PTH_t020 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D PTH_t004 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D PTH_t003 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D PTH_t015 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D PTH_t023 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D PTH_t009 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D PTH_t028 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D PTH_t031 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D PTH_t035 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D PTH_t017 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D PTH_t050 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D PTH_t025 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D PTH_t030 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D PTH_t042 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D PTH_t021 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D PTH_t049 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D PTH_t016 tRNA-His K14226 tRNA-His; tRNA His D PTH_t007 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D PTH_t043 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D PTH_t019 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D PTH_t045 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D PTH_t033 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D PTH_t046 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D PTH_t018 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D PTH_t051 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D PTH_t034 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D PTH_t014 tRNA-Met K14230 tRNA-Met; tRNA Met D PTH_t012 tRNA-Met K14230 tRNA-Met; tRNA Met D PTH_t024 tRNA-Met K14230 tRNA-Met; tRNA Met D PTH_t029 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D PTH_t036 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D PTH_t040 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D PTH_t039 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D PTH_t005 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D PTH_t006 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D PTH_t001 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D PTH_t002 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D PTH_t013 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D PTH_t010 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D PTH_t048 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D PTH_t037 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D PTH_t011 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D PTH_t026 tRNA-Val K14237 tRNA-Val; tRNA Val D PTH_t047 tRNA-Val K14237 tRNA-Val; tRNA Val D PTH_t044 tRNA-Val K14237 tRNA-Val; tRNA Val D PTH_t032 tRNA-Sec K14238 tRNA-Sec; tRNA Sec D PTH_r004 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D PTH_r001 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D PTH_r002 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D PTH_r005 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D PTH_r006 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D PTH_r003 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D PTH_2896 EutG; alcohol dehydrogenase K19954 adh1; alcohol dehydrogenase [EC:1.1.1.-] D PTH_0851 EutG; alcohol dehydrogenase K19954 adh1; alcohol dehydrogenase [EC:1.1.1.-] D PTH_1064 Tas; predicted oxidoreductases K23107 yajO; 1-deoxyxylulose-5-phosphate synthase [EC:1.1.-.-] D PTH_0261 predicted dehydrogenase K14330 K14330; fatty aldehyde-generating acyl-ACP reductase [EC:1.2.1.80] D PTH_1539 CoxS; aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3] D PTH_1579 CoxS; aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3] D PTH_1540 CoxM; aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs K03519 coxM; aerobic carbon-monoxide dehydrogenase medium subunit [EC:1.2.5.3] D PTH_2846 indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits K00179 iorA; indolepyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.8] D PTH_1660 indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits K00179 iorA; indolepyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.8] D PTH_2845 PorG; pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit K00180 iorB; indolepyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.8] D PTH_1661 PorG; pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit K00180 iorB; indolepyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.8] D PTH_0679 aerobic-type carbon monoxide dehydrogenase K07469 mop; aldehyde oxidoreductase [EC:1.2.99.7] D PTH_0594 predicted Fe-S oxidoreductases K24696 mftC; [mycofactocin precursor peptide]-tyrosine decarboxylase / 3-amino-5-[(4-hydroxyphenyl)methyl]-4,4-dimethylpyrrolidin-2-one synthase [EC:1.3.98.7 4.1.99.26] D PTH_2000 CaiA; acyl-CoA dehydrogenases K18244 mmgC; acyl-CoA dehydrogenase [EC:1.3.99.-] D PTH_1573 CaiA; acyl-CoA dehydrogenases K18244 mmgC; acyl-CoA dehydrogenase [EC:1.3.99.-] D PTH_2433 CaiA; acyl-CoA dehydrogenases K18244 mmgC; acyl-CoA dehydrogenase [EC:1.3.99.-] D PTH_2430 FixC; dehydrogenases K00313 fixC; electron transfer flavoprotein-quinone oxidoreductase [EC:1.5.5.-] D PTH_0018 FixC; dehydrogenases K00313 fixC; electron transfer flavoprotein-quinone oxidoreductase [EC:1.5.5.-] D PTH_0598 FixC; dehydrogenases K00313 fixC; electron transfer flavoprotein-quinone oxidoreductase [EC:1.5.5.-] D PTH_1766 FixC; dehydrogenases K00313 fixC; electron transfer flavoprotein-quinone oxidoreductase [EC:1.5.5.-] D PTH_1378 NuoF; NADH:ubiquinone oxidoreductase, NADH-binding 51 kD subunit K18331 hndC; NADP-reducing hydrogenase subunit HndC [EC:1.12.1.3] D PTH_2010 hypothetical hydrogenase subunit K18332 hndD; NADP-reducing hydrogenase subunit HndD [EC:1.12.1.3] D PTH_1377 hypothetical hydrogenase subunit K18332 hndD; NADP-reducing hydrogenase subunit HndD [EC:1.12.1.3] D PTH_1180 UbiB; 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D PTH_2252 Wzb; protein-tyrosine-phosphatase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4] D PTH_0684 predicted Fe-S oxidoreductases K06937 E1.21.98.5; tetraether lipid synthase [EC:1.21.98.5] D PTH_1841 NrdG; organic radical activating enzymes K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4] D PTH_2155 NrdG; organic radical activating enzymes K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4] D PTH_2421 PflA; pyruvate-formate lyase-activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D PTH_0468 PflA; pyruvate-formate lyase-activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D PTH_0928 PflX; Uncharacterized Fe-S protein K04070 pflX; putative pyruvate formate lyase activating enzyme [EC:1.97.1.4] D PTH_2678 Pcm; protein-L-isoaspartate carboxylmethyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D PTH_1319 hypothetical protein K04766 acuA; acetoin utilization protein AcuA [EC:2.3.1.-] D PTH_0617 RfaG; glycosyltransferase K15521 mshA; D-inositol-3-phosphate glycosyltransferase [EC:2.4.1.250] D PTH_2631 PurE; NCAIR mutase (PurE)-related proteins K06898 larB; pyridinium-3,5-biscarboxylic acid mononucleotide synthase [EC:2.5.1.143] D PTH_0965 Lgt; prolipoprotein diacylglyceryltransferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D PTH_0902 Uncharacterized protein conserved in bacteria K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33] D PTH_2467 retron-type reverse transcriptase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D PTH_2468 retron-type reverse transcriptase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D PTH_2412 retron-type reverse transcriptase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D PTH_0286 predicted nucleic acid-binding protein K07067 disA; diadenylate cyclase [EC:2.7.7.85] D PTH_0536 uncharacterized conserved protein K18672 dacA; diadenylate cyclase [EC:2.7.7.85] D PTH_2377 hypothetical protein K22579 rph; rifampicin phosphotransferase [EC:2.7.9.6] D PTH_2376 PpsA; phosphoenolpyruvate synthase/pyruvate phosphate dikinase K22579 rph; rifampicin phosphotransferase [EC:2.7.9.6] D PTH_1225 RsbW; anti-sigma regulatory factor K06379 spoIIAB; stage II sporulation protein AB (anti-sigma F factor) [EC:2.7.11.1] D PTH_0282 argininekinase K19405 mcsB; protein arginine kinase [EC:2.7.14.1] D PTH_0646 predicted phosphatase homologous K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106] D PTH_2212 predicted phosphatase K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106] D PTH_1667 predicted thioesterase K18700 flK; fluoroacetyl-CoA thioesterase [EC:3.1.2.29] D PTH_1889 FcbC; predicted thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D PTH_0191 hypothetical membrane protein K06382 spoIIE; stage II sporulation protein E [EC:3.1.3.16] D PTH_1307 predicted metal-dependent phosphoesterases K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97] D PTH_1128 predicted hydrolase K07015 yqeG; putative phosphatase [EC:3.1.3.-] D PTH_0661 uncharacterized conserved protein K09116 K09116; damage-control phosphatase, subfamily I [EC:3.1.3.-] D PTH_0891 predicted membrane-associated HD superfamily hydrolase K07037 pgpH; cyclic-di-AMP phosphodiesterase PgpH [EC:3.1.4.-] D PTH_0070 TatD; Mg-dependent DNase K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D PTH_2173 putative peptidoglycan-binding domain-containing protein K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D PTH_1791 Def; N-formylmethionyl-tRNA deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D PTH_0473 hypothetical membrane protein K01567 pdaA; peptidoglycan-N-acetylmuramic acid deacetylase [EC:3.5.1.-] D PTH_2826 Wzb; protein-tyrosine-phosphatase K20201 ywlE; protein arginine phosphatase [EC:3.9.1.2] D PTH_2267 SplB; DNA repair photolyase K03716 splB; spore photoproduct lyase [EC:4.1.99.14] D PTH_0212 SplB; DNA repair photolyase K03716 splB; spore photoproduct lyase [EC:4.1.99.14] D PTH_0657 predicted Carbohydrate kinase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D PTH_0252 ATP-utilizing enzymes K06864 larE; pyridinium-3,5-biscarboxylic acid mononucleotide sulfurtransferase [EC:4.4.1.37] D PTH_2629 ATP-utilizing enzymes of the PP-loop superfamily K06864 larE; pyridinium-3,5-biscarboxylic acid mononucleotide sulfurtransferase [EC:4.4.1.37] D PTH_2630 hypothetical protein K09121 larC; pyridinium-3,5-bisthiocarboxylic acid mononucleotide nickel chelatase [EC:4.99.1.12] D PTH_2911 uncharacterized conserved protein K09121 larC; pyridinium-3,5-bisthiocarboxylic acid mononucleotide nickel chelatase [EC:4.99.1.12] D PTH_0616 KamA; lysine 2,3-aminomutase K19814 eam; glutamate 2,3-aminomutase [EC:5.4.3.9] D PTH_0568 activator of 2-hydroxyglutaryl-CoA dehydratase K23876 hgdC; (R)-2-hydroxyacyl-CoA dehydratese activating ATPase [EC:5.6.1.9] D PTH_1459 MgtA; cation transport ATPase K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10] D PTH_1801 MgtA; cation transport ATPase K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10] D PTH_0233 ZntA; cation transport ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21] C 99981 Carbohydrate metabolism D PTH_2126 FOG: CBS domain K04767 acuB; acetoin utilization protein AcuB D PTH_2235 uncharacterized conserved protein K00782 lldG; L-lactate dehydrogenase complex protein LldG C 99982 Energy metabolism D PTH_2610 FdhD; Uncharacterized protein K02379 fdhD; FdhD protein D PTH_1442 Fer; ferredoxin K05337 fer; ferredoxin D PTH_0908 ferredoxin K05524 fdxA; ferredoxin D PTH_1055 IscU; NifU homolog K04488 iscU; nitrogen fixation protein NifU and related proteins D PTH_0581 IscU; NifU homolog K04488 iscU; nitrogen fixation protein NifU and related proteins D PTH_0432 MoxR-like ATPase K04748 norQ; nitric oxide reductase NorQ protein D PTH_1552 FixA; electron transfer flavoprotein, beta subunit K03521 fixA; electron transfer flavoprotein beta subunit D PTH_2001 FixA; electron transfer flavoprotein, beta subunit K03521 fixA; electron transfer flavoprotein beta subunit D PTH_0016 FixA; electron transfer flavoprotein, beta subunit K03521 fixA; electron transfer flavoprotein beta subunit D PTH_1768 FixA; electron transfer flavoprotein, beta subunit K03521 fixA; electron transfer flavoprotein beta subunit D PTH_0514 Etf; electron transfer flavoprotein K03521 fixA; electron transfer flavoprotein beta subunit D PTH_0600 hypothetical protein K03521 fixA; electron transfer flavoprotein beta subunit D PTH_2432 FixA; electron transfer flavoprotein, beta subunit K03521 fixA; electron transfer flavoprotein beta subunit D PTH_1765 FixX; ferredoxin-like protein K03855 fixX; ferredoxin like protein D PTH_0019 FixX; ferredoxin-like protein K03855 fixX; ferredoxin like protein D PTH_0599 FixX; ferredoxin-like protein K03855 fixX; ferredoxin like protein D PTH_2856 DsrC; dissimilatory sulfite reductase (desulfoviridin), gamma subunit K23077 dsrC; dissimilatory sulfite reductase related protein D PTH_1227 uncharacterized conserved protein K09165 K09165; dodecin C 99983 Lipid metabolism C 99984 Nucleotide metabolism C 99985 Amino acid metabolism D PTH_1828 predicted enzyme K06997 yggS; PLP dependent protein C 99986 Glycan metabolism D PTH_0126 predicted integral membrane protein K07027 K07027; glycosyltransferase 2 family protein D PTH_0601 hypothetical glycosyltransferase K24698 mftF; mycofactocin glycosyltransferase D PTH_1011 SleB; cell wall hydrolyses K01449 cwlJ; cell wall hydrolase C 99987 Cofactor metabolism D PTH_2621 MobB; molybdopterin-guanine dinucleotide biosynthesis protein K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein C 99988 Secondary metabolism C 99999 Others B B 09192 Unclassified: genetic information processing C 99973 Transcription D PTH_2755 CspC; cold shock proteins K03704 cspA; cold shock protein D PTH_1796 Uncharacterized protein conserved in bacteria K09777 remA; extracellular matrix regulatory protein A D PTH_0004 conserved hypothetical protein K24648 remB; extracellular matrix regulatory protein B C 99974 Translation D PTH_0189 VacB; predicted RNA binding protein K07571 K07571; S1 RNA binding domain protein D PTH_1833 YSH1; predicted exonuclease K07576 K07576; metallo-beta-lactamase family protein C 99975 Protein processing D PTH_0281 Uncharacterized protein K19411 mcsA; protein arginine kinase activator D PTH_0803 Tig; FKBP-type peptidyl-prolyl cis-trans isomerase K03545 tig; trigger factor D PTH_1693 hypothetical protein K02380 fdhE; FdhE protein D PTH_2712 SmpB; tmRNA-binding protein K03664 smpB; SsrA-binding protein D PTH_1697 HypC; hydrogenase maturation factor K04653 hypC; hydrogenase expression/formation protein HypC D PTH_1698 HypD; hydrogenase maturation factor K04654 hypD; hydrogenase expression/formation protein HypD D PTH_1699 HypE; hydrogenase maturation factor K04655 hypE; hydrogenase expression/formation protein HypE D PTH_1696 HypF; hydrogenase maturation factor K04656 hypF; hydrogenase maturation protein HypF D PTH_1690 predicted ATPase K07391 comM; magnesium chelatase family protein D PTH_2694 hypothetical membrane protein K07399 resB; cytochrome c biogenesis protein D PTH_1534 hypothetical protein K07402 xdhC; xanthine dehydrogenase accessory factor D PTH_1535 XdhC; xanthine and CO dehydrogenases maturation factor K07402 xdhC; xanthine dehydrogenase accessory factor D PTH_0686 XdhC; xanthine and CO dehydrogenases maturation factor K07402 xdhC; xanthine dehydrogenase accessory factor D PTH_1549 hypothetical protein K07402 xdhC; xanthine dehydrogenase accessory factor C 99976 Replication and repair D PTH_0860 adenine-specific DNA methylase K07445 K07445; putative DNA methylase D PTH_2404 adenine-specific DNA methylase K07445 K07445; putative DNA methylase D PTH_0816 RadC; DNA repair proteins K03630 radC; DNA repair protein RadC D PTH_2457 hypothetical DNA repair proteins K03630 radC; DNA repair protein RadC D PTH_2677 Uncharacterized protein conserved in bacteria K09760 rmuC; DNA recombination protein RmuC D PTH_1707 predicted endonuclease K07460 yraN; putative endonuclease D PTH_1245 Smf; predicted Rossmann fold nucleotide-binding protein K04096 smf; DNA processing protein D PTH_1009 DnaD; putative primosome component and related proteins K02086 dnaD; DNA replication protein D PTH_1052 ATPase K07478 ycaJ; putative ATPase D PTH_0388 hypothetical protein K07481 K07481; transposase, IS5 family D PTH_0392 hypothetical protein K07481 K07481; transposase, IS5 family D PTH_2142 Icd; monomeric isocitrate dehydrogenase K07481 K07481; transposase, IS5 family D PTH_2188 hypothetical protein K07481 K07481; transposase, IS5 family D PTH_2200 hypothetical protein K07481 K07481; transposase, IS5 family D PTH_2137 hypothetical protein K07481 K07481; transposase, IS5 family D PTH_2026 transposase and inactivated derivatives K07481 K07481; transposase, IS5 family D PTH_1354 hypothetical protein K07481 K07481; transposase, IS5 family D PTH_1213 hypothetical protein K07481 K07481; transposase, IS5 family D PTH_2571 hypothetical protein K07481 K07481; transposase, IS5 family D PTH_1569 transposase and inactivated derivatives K07483 K07483; transposase D PTH_1571 hypothetical protein K07483 K07483; transposase D PTH_1901 hypothetical protein K07483 K07483; transposase D PTH_2416 hypothetical protein K07483 K07483; transposase D PTH_2394 transposase and inactivated derivatives K07484 K07484; transposase D PTH_2395 transposase and inactivated derivatives K07484 K07484; transposase D PTH_2397 hypothetical protein K07484 K07484; transposase D PTH_2398 hypothetical protein K07484 K07484; transposase D PTH_2703 transposase and inactivated derivatives K07486 K07486; transposase D PTH_0710 hypothetical protein K07486 K07486; transposase D PTH_2512 transposase and inactivated derivatives K07491 rayT; REP-associated tyrosine transposase D PTH_0284 transposase and inactivated derivatives K07491 rayT; REP-associated tyrosine transposase D PTH_2109 transposase and inactivated derivatives K07491 rayT; REP-associated tyrosine transposase D PTH_2905 transposase and inactivated derivatives K07491 rayT; REP-associated tyrosine transposase D PTH_1352 transposase and inactivated derivatives K07493 K07493; putative transposase D PTH_1563 transposase and inactivated derivatives K07493 K07493; putative transposase D PTH_2357 transposase and inactivated derivatives K07493 K07493; putative transposase D PTH_2448 transposase and inactivated derivatives K07493 K07493; putative transposase D PTH_0720 transposase and inactivated derivatives K07493 K07493; putative transposase D PTH_1388 transposase and inactivated derivatives K07493 K07493; putative transposase D PTH_1467 transposase and inactivated derivatives K07493 K07493; putative transposase D PTH_2393 transposase and inactivated derivatives K07493 K07493; putative transposase D PTH_2413 hypothetical protein K07493 K07493; putative transposase D PTH_1435 transposase and inactivated derivatives K07493 K07493; putative transposase D PTH_2511 transposase and inactivated derivatives K07496 K07496; putative transposase D PTH_1568 Tra5; transposase and inactivated derivatives K07497 K07497; putative transposase D PTH_2415 hypothetical protein K07497 K07497; putative transposase D PTH_1572 Tra5; transposase and inactivated derivatives K07497 K07497; putative transposase D PTH_0366 hypothetical protein K07497 K07497; putative transposase D PTH_0367 hypothetical protein K07497 K07497; putative transposase D PTH_2140 hypothetical protein related to integrase K07497 K07497; putative transposase D PTH_1219 hypothetical protein K07497 K07497; putative transposase D PTH_1892 hypothetical protein K07497 K07497; putative transposase D PTH_1897 hypothetical protein K07497 K07497; putative transposase D PTH_1907 transposase K07497 K07497; putative transposase D PTH_2426 hypothetical protein K07497 K07497; putative transposase D PTH_0718 Tra5; transposase and inactivated derivatives K07497 K07497; putative transposase C 99979 Viral proteins C 99998 Others D PTH_0052 Uncharacterized protein conserved in bacteria K09747 ebfC; nucleoid-associated protein EbfC D PTH_0090 Uncharacterized protein conserved in bacteria K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D PTH_2681 AcrB; cation/multidrug efflux pump K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family D PTH_2037 PitA; phosphate/sulphate permeases K03306 TC.PIT; inorganic phosphate transporter, PiT family D PTH_0492 PutP; Na+/proline symporter K03307 TC.SSS; solute:Na+ symporter, SSS family D PTH_2851 PutP; Na+/proline symporter K03307 TC.SSS; solute:Na+ symporter, SSS family D PTH_2848 PanF; Na+/panthothenate symporter K03307 TC.SSS; solute:Na+ symporter, SSS family D PTH_2292 CitT; di- and tricarboxylate transporters K03319 TC.DASS; divalent anion:Na+ symporter, DASS family C 99978 Cell growth D PTH_1000 CooC; CO dehydrogenase maturation factor K07321 cooC; CO dehydrogenase maturation factor D PTH_0054 hypothetical membrane protein K06317 bofA; inhibitor of the pro-sigma K processing machinery D PTH_0183 hypothetical protein K06333 cotJB; spore coat protein JB D PTH_0146 Mn-containing catalase K06334 cotJC; spore coat protein JC D PTH_2918 Jag; predicted RNA binding protein K06346 jag; spoIIIJ-associated protein D PTH_1641 SpmA; Uncharacterized membrane protein K06373 spmA; spore maturation protein A D PTH_1640 SpmB; Uncharacterized membrane protein K06374 spmB; spore maturation protein B D PTH_1460 Spo0M; sporulation control protein K06377 spo0M; sporulation-control protein D PTH_1224 SpoIIAA; anti-anti-sigma regulatory factor K06378 spoIIAA; stage II sporulation protein AA (anti-sigma F factor antagonist) D PTH_1209 SpoIIM; Uncharacterized membrane protein K06384 spoIIM; stage II sporulation protein M D PTH_1615 hypothetical membrane protein K06385 spoIIP; stage II sporulation protein P D PTH_0871 hypothetical membrane protein K06385 spoIIP; stage II sporulation protein P D PTH_0185 hypothetical membrane protein K06387 spoIIR; stage II sporulation protein R D PTH_1166 SpoIIIAA; Uncharacterized protein conserved in bacteria K06390 spoIIIAA; stage III sporulation protein AA D PTH_1167 hypothetical membrane protein K06391 spoIIIAB; stage III sporulation protein AB D PTH_1168 hypothetical membrane protein K06392 spoIIIAC; stage III sporulation protein AC D PTH_1169 hypothetical membrane protein K06393 spoIIIAD; stage III sporulation protein AD D PTH_1170 hypothetical membrane protein K06394 spoIIIAE; stage III sporulation protein AE D PTH_1171 hypothetical membrane protein K06395 spoIIIAF; stage III sporulation protein AF D PTH_1172 hypothetical membrane protein K06396 spoIIIAG; stage III sporulation protein AG D PTH_1173 hypothetical protein K06397 spoIIIAH; stage III sporulation protein AH D PTH_1605 hypothetical protein K06398 spoIVA; stage IV sporulation protein A D PTH_0159 hypothetical protein K06400 spoIVCA; site-specific DNA recombinase D PTH_2239 PinR; site-specific recombinases K06400 spoIVCA; site-specific DNA recombinase D PTH_0181 PinR; site-specific recombinases K06400 spoIVCA; site-specific DNA recombinase D PTH_0693 PinR; site-specific recombinases K06400 spoIVCA; site-specific DNA recombinase D PTH_1125 hypothetical protein K06400 spoIVCA; site-specific DNA recombinase D PTH_1228 hypothetical membrane protein K06405 spoVAC; stage V sporulation protein AC D PTH_1229 hypothetical protein K06406 spoVAD; stage V sporulation protein AD D PTH_1230 hypothetical membrane protein K06407 spoVAE; stage V sporulation protein AE D PTH_1231 GerA; Bacillus/Clostridium GerA spore germination protein K06408 spoVAF; stage V sporulation protein AF D PTH_1284 hypothetical protein K06410 spoVFA; dipicolinate synthase subunit A D PTH_1285 Dfp; phosphopantothenoylcysteine synthetase/decarboxylase K06411 spoVFB; dipicolinate synthase subunit B D PTH_0103 SpoVG; Uncharacterized protein K06412 spoVG; stage V sporulation protein G D PTH_1346 SpoVK; ATPase of the AAA+ class K06413 spoVK; stage V sporulation protein K D PTH_2484 hypothetical protein K06413 spoVK; stage V sporulation protein K D PTH_1643 SpoVR; uncharacterized conserved protein K06415 spoVR; stage V sporulation protein R D PTH_1305 SpoVS; Uncharacterized protein conserved in bacteria K06416 spoVS; stage V sporulation protein S D PTH_1756 hypothetical protein K06421 sspD; small acid-soluble spore protein D (minor alpha/beta-type SASP) D PTH_0083 hypothetical protein K06436 yabG; spore coat assemly protein D PTH_0889 hypothetical membrane protein K06438 yqfD; similar to stage IV sporulation protein D PTH_1840 hypothetical membrane protein K06295 gerKA; spore germination protein KA D PTH_1838 hypothetical membrane protein K06297 gerKC; spore germination protein KC D PTH_1646 hypothetical membrane protein K06298 gerM; germination protein M D PTH_2852 hypothetical membrane protein K06313 ypeB; spore germination protein C 99993 Cell motility C 99995 Signaling proteins D PTH_0988 ACT domain-containing protein K07166 K07166; ACT domain-containing protein D PTH_0890 PhoH; phosphate starvation-inducible protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins D PTH_2159 hypothetical protein K07175 phoH2; PhoH-like ATPase D PTH_1645 PrkA; putative Ser protein kinase K07180 prkA; serine protein kinase D PTH_0748 RAD55; RecA-superfamily ATPase K08482 kaiC; circadian clock protein KaiC C 99992 Structural proteins D PTH_2801 EmrA; multidrug resistance efflux pump K01993 ABC-2.TX; HlyD family secretion protein D PTH_0037 AcrA; membrane-fusion protein K02005 ABC.CD.TX; HlyD family secretion protein D PTH_1458 AcrA; membrane-fusion protein K02005 ABC.CD.TX; HlyD family secretion protein D PTH_0435 hypothetical membrane protein K23262 gvpA; gas vesicle structural protein C 99994 Others D PTH_1676 PhoU; phosphate uptake regulator K02039 phoU; phosphate transport system protein D PTH_0674 Periplasmic molybdate-binding protein/domain K07219 K07219; putative molybdopterin biosynthesis protein D PTH_2616 molybdopterin biosynthesis enzyme K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D PTH_1499 predicted integral membrane protein K26996 sdpI; immunity protein, SdpI family B B 09194 Poorly characterized C 99996 General function prediction only D PTH_2039 OsmY; predicted periplasmic or secreted lipoprotein K04065 osmY; hyperosmotically inducible periplasmic protein D PTH_2730 HIS2; histidinol phosphatase and related hydrolases of the PHP family K04477 ycdX; putative hydrolase D PTH_0989 RssA; predicted esterase K07001 K07001; NTE family protein D PTH_2474 hypothetical membrane protein K07038 K07038; inner membrane protein D PTH_2482 hypothetical membrane protein K07038 K07038; inner membrane protein D PTH_2910 predicted phosphoribosyltransferases K07100 K07100; putative phosphoribosyl transferase D PTH_0870 hypothetical membrane protein K08972 K08972; putative membrane protein D PTH_1072 predicted membrane protein K08982 K08982; putative membrane protein C 99997 Function unknown D PTH_2863 predicted Fe-S oxidoreductases K06871 K06871; uncharacterized protein D PTH_2370 AslB; arylsulfatase regulator K06871 K06871; uncharacterized protein D PTH_2368 AslB; arylsulfatase regulator K06871 K06871; uncharacterized protein D PTH_2284 AslB; arylsulfatase regulator K06871 K06871; uncharacterized protein D PTH_2344 AslB; arylsulfatase regulator K06871 K06871; uncharacterized protein D PTH_0885 AslB; arylsulfatase regulator K06871 K06871; uncharacterized protein D PTH_2371 AslB; arylsulfatase regulator K06871 K06871; uncharacterized protein D PTH_0491 Pta; BioD-like N-terminal domain of phosphotransacetylase K06873 K06873; uncharacterized protein D PTH_2562 phosphohydrolases K06885 K06885; uncharacterized protein D PTH_0408 HD superfamily phosphohydrolases K06885 K06885; uncharacterized protein D PTH_2567 phosphohydrolases K06885 K06885; uncharacterized protein D PTH_0147 predicted ATPase K06921 K06921; uncharacterized protein D PTH_2028 predicted ATPase K06923 K06923; uncharacterized protein D PTH_0588 predicted DNA-binding proteins K06933 K06933; uncharacterized protein D PTH_1722 predicted RNA binding protein K06960 K06960; uncharacterized protein D PTH_0300 predicted RNA binding protein K06962 K06962; uncharacterized protein D PTH_0750 hypothetical protein K07013 K07013; uncharacterized protein D PTH_2591 predicted membrane protein K07034 K07034; uncharacterized protein D PTH_0014 predicted metal-dependent hydrolase of the TIM-barrel fold K07045 K07045; uncharacterized protein D PTH_1688 predicted metal-dependent hydrolase K07045 K07045; uncharacterized protein D PTH_0403 predicted nucleic acid-binding protein K07063 K07063; uncharacterized protein D PTH_0364 predicted nucleic acid-binding protein K07064 K07064; uncharacterized protein D PTH_2792 predicted nucleic acid-binding protein K07064 K07064; uncharacterized protein D PTH_0703 predicted nucleic acid-binding protein K07064 K07064; uncharacterized protein D PTH_2698 predicted nucleic acid-binding protein K07065 K07065; uncharacterized protein D PTH_2783 predicted nucleic acid-binding protein K07065 K07065; uncharacterized protein D PTH_0023 hypothetical protein K07075 K07075; uncharacterized protein D PTH_2584 predicted nucleotidyltransferases K07075 K07075; uncharacterized protein D PTH_2686 Tas; predicted oxidoreductases K07079 K07079; uncharacterized protein D PTH_0570 predicted permease K07089 K07089; uncharacterized protein D PTH_0648 predicted permease K07089 K07089; uncharacterized protein D PTH_1239 predicted permease K07090 K07090; uncharacterized protein D PTH_2261 predicted permease K07090 K07090; uncharacterized protein D PTH_0626 hypothetical membrane protein K07090 K07090; uncharacterized protein D PTH_0793 predicted phosphoesterase K07095 K07095; uncharacterized protein D PTH_2059 predicted phosphohydrolase K07099 K07099; uncharacterized protein D PTH_0552 hypothetical protein K07112 K07112; uncharacterized protein D PTH_2884 Uncharacterized FAD-dependent dehydrogenases K07137 K07137; uncharacterized protein D PTH_2121 Uncharacterized Fe-S center protein K07138 K07138; uncharacterized protein D PTH_2636 Uncharacterized Fe-S center protein K07138 K07138; uncharacterized protein D PTH_2637 Uncharacterized Fe-S center protein K07138 K07138; uncharacterized protein D PTH_1983 predicted Fe-S oxidoreductase K07139 K07139; uncharacterized protein D PTH_2912 Uncharacterized membrane protein K07150 K07150; uncharacterized protein D PTH_0548 CoxE; hypothetical protein K07161 K07161; uncharacterized protein D PTH_0915 Zn-ribbon protein, possibly nucleic acid-binding K07164 K07164; uncharacterized protein D PTH_1040 uncharacterized conserved protein K08999 K08999; uncharacterized protein D PTH_1454 uncharacterized conserved protein K09005 K09005; uncharacterized protein D PTH_1387 uncharacterized conserved protein K09118 K09118; uncharacterized protein D PTH_0961 uncharacterized conserved protein K09126 K09126; uncharacterized protein D PTH_1821 uncharacterized conserved protein K09131 K09131; uncharacterized protein D PTH_1401 hypothetical protein K09139 K09139; uncharacterized protein D PTH_0987 uncharacterized conserved protein K09157 K09157; uncharacterized protein D PTH_1034 uncharacterized conserved protein K09163 K09163; uncharacterized protein D PTH_0383 Uncharacterized protein conserved in archaea K09726 K09726; uncharacterized protein D PTH_1789 uncharacterized conserved protein K09729 K09729; uncharacterized protein D PTH_1474 uncharacterized conserved protein K09740 K09740; uncharacterized protein D PTH_1814 hypothetical protein K09749 K09749; uncharacterized protein D PTH_2696 hypothetical protein K09749 K09749; uncharacterized protein D PTH_2055 Uncharacterized protein conserved in bacteria K09764 K09764; uncharacterized protein D PTH_2679 hypothetical protein K09766 K09766; uncharacterized protein D PTH_0081 Uncharacterized protein conserved in bacteria K09776 K09776; uncharacterized protein D PTH_1644 uncharacterized conserved protein K09786 K09786; uncharacterized protein D PTH_1725 hypothetical protein K09787 K09787; uncharacterized protein D PTH_1423 Uncharacterized protein conserved in bacteria K09793 K09793; uncharacterized protein D PTH_2836 hypothetical protein K09928 K09928; uncharacterized protein D PTH_0129 Uncharacterized protein conserved in bacteria K09931 K09931; uncharacterized protein D PTH_2227 Uncharacterized protein conserved in bacteria K09942 K09942; uncharacterized protein D PTH_0021 Uncharacterized protein conserved in bacteria K09981 K09981; uncharacterized protein D PTH_1543 Uncharacterized protein conserved in bacteria K09989 K09989; uncharacterized protein D PTH_2595 uncharacterized conserved protein K05967 K05967; uncharacterized protein D PTH_1614 hypothetical membrane protein K05739 seaA; uncharacterized protein D PTH_2036 phosphate transport regulator K07220 K07220; uncharacterized protein D PTH_1267 predicted nucleic acid-binding protein K07742 ylxR; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 20, 2024