+E Transcription factors KO
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Transcription Factors - Pelotomaculum thermopropionicum
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AEukaryotic type
B Basic leucine zipper (bZIP)
C AP-1(-like) components, Jun
C AP-1(-like) components, Fos
C AP-1(-like) components, Maf
C AP-1(-like) components, NF-E2
C AP-1(-like) components, Fungal regulators
C AP-1(-like) components, CRE-BP/ATF
C CREB
C C/EBP-like factors
C bZIP/PAR
C Plant bZIP factors
C ZIP only
B Basic helix-loop-helix (bHLH)
C Ubiquitous (class A) factors
C Myogenic transcription factors
C Achaete-Scute
C Tal/Twist/Atonal/Hen, Lymphoid factors
C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors
C Tal/Twist/Atonal/Hen, HEN
C Tal/Twist/Atonal/Hen, Mesp
C Tal/Twist/Atonal/Hen, Atonal
C Tal/Twist/Atonal/Hen, Pancreatic factors
C Hairy, Hairy/E(SPL)
C Hairy, Fungal regulators
C Factors with PAS domain
C Yabby
C INO
C HLH domain only
B Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
C Ubiquitous bHLH-ZIP factors
C Cell cycle controlling factors, Myc
C Cell cycle controlling factors, Mad/Max
C Other bHLH-ZIP factors
B Other basic domains
C NF-1
C RF-X
C AP-2 (bHSH)
B Zinc finger
C Cys4 thyroid hormone receptor-like
C Cys4 hepatocyte nuclear factor 4-like
C Cys4 estrogen receptor-like
C Cys4 nerve growth factor IB-like
C Cys4 Fushi tarazu-F1-like
C Cys4 germ cell nuclear factor
C Cys4 Knirps/DAX1-like
C Cys4 GATA-factors
C Cys2His2 SP/KLF family and related proteins
C Cys2His2 GLI-like
C Cys2His2 Snail
C Cys2His2 BTB-ZF factors
C Cys2His2 BED
C Cys2His2 PRDM
C Cys2His2 metabolic regulators in fungi
C Cys2His2 others
C Cys2HisCys zinc factors
C Cys3His zinc factors
C Cys2CysHis zinc factors
C CXXC CpG-binding proteins
C Cys6 metabolic regulators in fungi
C Other zinc fingers
B Helix-turn-helix
C Homeo domain ANTP: HOXL
C Homeo domain ANTP: NKL
C Homeo domain Paired-related
C Homeo domain LIM
C Homeo domain POU
C Homeo domain SINE
C Homeo domain ZF
C Homeo domain CUT
C Homeo domain PROS
C Homeo domain TALE
C Homeo domain other
C Fork head/winged helix developmental regulators
C Fork head/winged helix tissue-specific regulators
C Fork head/winged helix cell cycle-controlling factors, E2F
C Fork head/winged helix cell cycle-controlling factors, DP
C Fork head/winged helix other regulators
C Heat shock factors
C Tryptophan clusters Myb, Myb-factors
C Tryptophan clusters Myb, Myb-like factors
C Tryptophan clusters Ets-type
C Tryptophan clusters interferon-regulating factors
C TEA domain
C ARID
B beta-Scaffold factors with minor groove contacts
C RHR (Rel homology region) Rel/Ankyrin
C RHR (Rel homology region) Ankyrin only
C RHR (Rel homology region) NF-AT
C STAT
C p53
C MADS-box regulators of differentiation, MEF-2
C MADS-box regulators of differentiation, Homeotic genes
C MADS-box regulators of differentiation, Yeast regulators
C MADS-box responders to external signals
C SAND domain-containing proteins
C TATA-binding proteins
C HMG SOX
C HMG TCF-1
C HMG2-related
C UBF
C Other HMG box factors
C Heteromeric CCAAT factors
C Grainyhead
C Cold-shock domain factors, DbpA-like
C Cold-shock domain factors, YB-1/DbpB-like
C Cold-shock domain factors, FRG Y2-like
C Runt
C MYRF
B Other transcription factors
C HMGI(Y)
C NUPR
E Line #4
C Pocket domain Rb
C Pocket domain CBP
C T-box
C DMRT
C LRRFIP
C TCP
C AP2/ERF
C WRKY
C LOB
C Copper-fist proteins fungal regulators
C Others
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AProkaryotic type
B Helix-turn-helix
C AraC family
D PTH_1521 Uncharacterized protein conserved in bacteria K13653 K13653; AraC family transcriptional regulator
C LysR family
C DeoR family
D PTH_2800 hypothetical protein K06283 spoIIID; putative DeoR family transcriptional regulator, stage III sporulation protein D
D PTH_0901 predicted transcriptional regulator K23774 ccpN; DeoR family transcriptional regulator, catabolite repression regulator
C LacI family
C GntR family
D PTH_2233 FadR; transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D PTH_2232 FadR; transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
C TetR/AcrR family
D PTH_1513 AcrR; transcriptional regulator K09017 rutR; TetR/AcrR family transcriptional regulator
D PTH_0211 AcrR; transcriptional regulator K13770 ysiA; TetR/AcrR family transcriptional regulator, fatty acid metabolism regulator protein
C Lrp/AsnC family
C LuxR family
C MarR family
C MerR family
C Fur family
D PTH_1383 Fur; Fe2+/Zn2+ uptake regulation proteins K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D PTH_1875 Fur; Fe2+/Zn2+ uptake regulation proteins K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D PTH_0045 Fur; Fe2+/Zn2+ uptake regulation proteins K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator
C IclR family
D PTH_0477 IclR; transcriptional regulator K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
D PTH_0030 IclR; transcriptional regulator K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
C CRP/FNR family
D PTH_0781 Crp; cAMP-binding proteins K21563 dnr; CRP/FNR family transcriptional regulator, dissimilatory nitrate respiration regulator
C Rrf2 family
D PTH_0234 predicted transcriptional regulator K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor
D PTH_1053 predicted transcriptional regulator K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor
C ArsR family
D PTH_0439 ArsR; predicted transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D PTH_0545 ArsR; predicted transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D PTH_0232 ArsR; predicted transcriptional regulator K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor
D PTH_1500 ArsR; predicted transcriptional regulator K26993 sdpR; ArsR family transcriptional regulator, repressor of sdpIR and other operons
C XRE family
C PadR family
C Other families
D PTH_1940 TroR; Mn-dependent transcriptional regulator K11924 mntR; DtxR family transcriptional regulator, manganese transport regulator
D PTH_0255 BirA; biotin-(acetyl-CoA carboxylase) ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D PTH_2900 AcoR; transcriptional activator of acetoin/glycerol metabolism K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D PTH_0844 RocR; transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D PTH_2013 CdaR; sugar diacid utilization regulator K02647 cdaR; carbohydrate diacid regulator
D PTH_2626 ModE; N-terminal domain of molybdenum-binding protein K02019 modE; molybdate transport system regulatory protein
D PTH_0840 ModE; N-terminal domain of molybdenum-binding protein K02019 modE; molybdate transport system regulatory protein
D PTH_0985 AT-rich DNA-binding protein K01926 rex; redox-sensing transcriptional repressor
D PTH_1251 CodY; pleiotropic transcriptional repressor K03706 codY; transcriptional pleiotropic repressor
B Ribbon-helix-helix
C CopG family
D PTH_0737 hypothetical protein K07723 ndoAI; CopG family transcriptional regulator / antitoxin EndoAI
C Other families
B Other transcription factors
C BglG family
C Others
D PTH_0266 regulator of polyketide synthase expression K09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein
D PTH_0067 AbrB; regulators of stationary/sporulation gene expression K06284 abrB; AbrB family transcriptional regulator, transcriptional pleiotropic regulator of transition state genes
D PTH_0119 AbrB; regulators of stationary/sporulation gene expression K04769 spoVT; AbrB family transcriptional regulator, stage V sporulation protein T
D PTH_0638 hypothetical protein K04769 spoVT; AbrB family transcriptional regulator, stage V sporulation protein T
D PTH_2913 Spo0J; predicted transcriptional regulator K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D PTH_0287 transcriptional regulator K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D PTH_1200 ArgR; arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D PTH_0875 HrcA; transcriptional regulator of heat shock gene K03705 hrcA; heat-inducible transcriptional repressor
D PTH_0280 CtsR; transcriptional repressor of class III stress genes K03708 ctsR; transcriptional regulator of stress and heat shock response
D PTH_2219 hypothetical protein K06285 mtrB; transcription attenuation protein (tryptophan RNA-binding attenuator protein)
D PTH_1813 PyrR; pyrimidine operon attenuation protein/uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D PTH_1843 predicted transcriptional regulator K07738 nrdR; transcriptional repressor NrdR
D PTH_1870 Uncharacterized protein conserved in bacteria K03925 mraZ; transcriptional regulator MraZ
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: June 7, 2024
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Classification taken and modified from TRANSFAC 7.0