+E Transcription factors KO #

  Transcription Factors - Pelotomaculum thermopropionicum

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AEukaryotic type B Basic leucine zipper (bZIP) C AP-1(-like) components, Jun C AP-1(-like) components, Fos C AP-1(-like) components, Maf C AP-1(-like) components, NF-E2 C AP-1(-like) components, Fungal regulators C AP-1(-like) components, CRE-BP/ATF C CREB C C/EBP-like factors C bZIP/PAR C Plant bZIP factors C ZIP only B Basic helix-loop-helix (bHLH) C Ubiquitous (class A) factors C Myogenic transcription factors C Achaete-Scute C Tal/Twist/Atonal/Hen, Lymphoid factors C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors C Tal/Twist/Atonal/Hen, HEN C Tal/Twist/Atonal/Hen, Mesp C Tal/Twist/Atonal/Hen, Atonal C Tal/Twist/Atonal/Hen, Pancreatic factors C Hairy, Hairy/E(SPL) C Hairy, Fungal regulators C Factors with PAS domain C Yabby C INO C HLH domain only B Basic helix-loop-helix/leucine zipper (bHLH-ZIP) C Ubiquitous bHLH-ZIP factors C Cell cycle controlling factors, Myc C Cell cycle controlling factors, Mad/Max C Other bHLH-ZIP factors B Other basic domains C NF-1 C RF-X C AP-2 (bHSH) B Zinc finger C Cys4 thyroid hormone receptor-like C Cys4 hepatocyte nuclear factor 4-like C Cys4 estrogen receptor-like C Cys4 nerve growth factor IB-like C Cys4 Fushi tarazu-F1-like C Cys4 germ cell nuclear factor C Cys4 Knirps/DAX1-like C Cys4 GATA-factors C Cys2His2 SP/KLF family and related proteins C Cys2His2 GLI-like C Cys2His2 Snail C Cys2His2 BTB-ZF factors C Cys2His2 BED C Cys2His2 PRDM C Cys2His2 metabolic regulators in fungi C Cys2His2 others C Cys2HisCys zinc factors C Cys3His zinc factors C Cys2CysHis zinc factors C CXXC CpG-binding proteins C Cys6 metabolic regulators in fungi C Other zinc fingers B Helix-turn-helix C Homeo domain ANTP: HOXL C Homeo domain ANTP: NKL C Homeo domain Paired-related C Homeo domain LIM C Homeo domain POU C Homeo domain SINE C Homeo domain ZF C Homeo domain CUT C Homeo domain PROS C Homeo domain TALE C Homeo domain other C Fork head/winged helix developmental regulators C Fork head/winged helix tissue-specific regulators C Fork head/winged helix cell cycle-controlling factors, E2F C Fork head/winged helix cell cycle-controlling factors, DP C Fork head/winged helix other regulators C Heat shock factors C Tryptophan clusters Myb, Myb-factors C Tryptophan clusters Myb, Myb-like factors C Tryptophan clusters Ets-type C Tryptophan clusters interferon-regulating factors C TEA domain C ARID B beta-Scaffold factors with minor groove contacts C RHR (Rel homology region) Rel/Ankyrin C RHR (Rel homology region) Ankyrin only C RHR (Rel homology region) NF-AT C STAT C p53 C MADS-box regulators of differentiation, MEF-2 C MADS-box regulators of differentiation, Homeotic genes C MADS-box regulators of differentiation, Yeast regulators C MADS-box responders to external signals C SAND domain-containing proteins C TATA-binding proteins C HMG SOX C HMG TCF-1 C HMG2-related C UBF C Other HMG box factors C Heteromeric CCAAT factors C Grainyhead C Cold-shock domain factors, DbpA-like C Cold-shock domain factors, YB-1/DbpB-like C Cold-shock domain factors, FRG Y2-like C Runt C MYRF B Other transcription factors C HMGI(Y) C NUPR E Line #4 C Pocket domain Rb C Pocket domain CBP C T-box C DMRT C LRRFIP C TCP C AP2/ERF C WRKY C LOB C Copper-fist proteins fungal regulators C Others # AProkaryotic type B Helix-turn-helix C AraC family D PTH_1521 Uncharacterized protein conserved in bacteria K13653 K13653; AraC family transcriptional regulator C LysR family C DeoR family D PTH_2800 hypothetical protein K06283 spoIIID; putative DeoR family transcriptional regulator, stage III sporulation protein D D PTH_0901 predicted transcriptional regulator K23774 ccpN; DeoR family transcriptional regulator, catabolite repression regulator C LacI family C GntR family D PTH_2233 FadR; transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D PTH_2232 FadR; transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex C TetR/AcrR family D PTH_1513 AcrR; transcriptional regulator K09017 rutR; TetR/AcrR family transcriptional regulator D PTH_0211 AcrR; transcriptional regulator K13770 ysiA; TetR/AcrR family transcriptional regulator, fatty acid metabolism regulator protein C Lrp/AsnC family C LuxR family C MarR family C MerR family C Fur family D PTH_1383 Fur; Fe2+/Zn2+ uptake regulation proteins K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D PTH_1875 Fur; Fe2+/Zn2+ uptake regulation proteins K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D PTH_0045 Fur; Fe2+/Zn2+ uptake regulation proteins K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator C IclR family D PTH_0477 IclR; transcriptional regulator K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor D PTH_0030 IclR; transcriptional regulator K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor C CRP/FNR family D PTH_0781 Crp; cAMP-binding proteins K21563 dnr; CRP/FNR family transcriptional regulator, dissimilatory nitrate respiration regulator C Rrf2 family D PTH_0234 predicted transcriptional regulator K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor D PTH_1053 predicted transcriptional regulator K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor C ArsR family D PTH_0439 ArsR; predicted transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D PTH_0545 ArsR; predicted transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D PTH_0232 ArsR; predicted transcriptional regulator K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor D PTH_1500 ArsR; predicted transcriptional regulator K26993 sdpR; ArsR family transcriptional regulator, repressor of sdpIR and other operons C XRE family C PadR family C Other families D PTH_1940 TroR; Mn-dependent transcriptional regulator K11924 mntR; DtxR family transcriptional regulator, manganese transport regulator D PTH_0255 BirA; biotin-(acetyl-CoA carboxylase) ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D PTH_2900 AcoR; transcriptional activator of acetoin/glycerol metabolism K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D PTH_0844 RocR; transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D PTH_2013 CdaR; sugar diacid utilization regulator K02647 cdaR; carbohydrate diacid regulator D PTH_2626 ModE; N-terminal domain of molybdenum-binding protein K02019 modE; molybdate transport system regulatory protein D PTH_0840 ModE; N-terminal domain of molybdenum-binding protein K02019 modE; molybdate transport system regulatory protein D PTH_0985 AT-rich DNA-binding protein K01926 rex; redox-sensing transcriptional repressor D PTH_1251 CodY; pleiotropic transcriptional repressor K03706 codY; transcriptional pleiotropic repressor B Ribbon-helix-helix C CopG family D PTH_0737 hypothetical protein K07723 ndoAI; CopG family transcriptional regulator / antitoxin EndoAI C Other families B Other transcription factors C BglG family C Others D PTH_0266 regulator of polyketide synthase expression K09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein D PTH_0067 AbrB; regulators of stationary/sporulation gene expression K06284 abrB; AbrB family transcriptional regulator, transcriptional pleiotropic regulator of transition state genes D PTH_0119 AbrB; regulators of stationary/sporulation gene expression K04769 spoVT; AbrB family transcriptional regulator, stage V sporulation protein T D PTH_0638 hypothetical protein K04769 spoVT; AbrB family transcriptional regulator, stage V sporulation protein T D PTH_2913 Spo0J; predicted transcriptional regulator K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D PTH_0287 transcriptional regulator K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription D PTH_1200 ArgR; arginine repressor K03402 argR; transcriptional regulator of arginine metabolism D PTH_0875 HrcA; transcriptional regulator of heat shock gene K03705 hrcA; heat-inducible transcriptional repressor D PTH_0280 CtsR; transcriptional repressor of class III stress genes K03708 ctsR; transcriptional regulator of stress and heat shock response D PTH_2219 hypothetical protein K06285 mtrB; transcription attenuation protein (tryptophan RNA-binding attenuator protein) D PTH_1813 PyrR; pyrimidine operon attenuation protein/uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D PTH_1843 predicted transcriptional regulator K07738 nrdR; transcriptional repressor NrdR D PTH_1870 Uncharacterized protein conserved in bacteria K03925 mraZ; transcriptional regulator MraZ ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: June 7, 2024 #
Classification taken and modified from TRANSFAC 7.0