+E Ribosome biogenesis KO #

  Ribosome Biogenesis - Pelotomaculum thermopropionicum

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AEukaryotic type B Sno RNPs C Box C/D snoRNPs C Box H/ACA snoRNPs B 90S particles C U3 small nucleolar RNA-associated proteins C Helicases C GTPase C RNase D PTH_1738 Rnc; dsRNA-specific ribonuclease K03685 rnc; ribonuclease III [EC:3.1.26.3] C Kinase C Other 90S particles B Pre-40S particles C Kinases C Export and cytoplasmic maturation factors C Other pre-40S particles B Pre-60S particles C Helicases C GTPases C RNases D RNase MRP C Kinases C Export and cytoplasmic maturation factors C 5-FMC complex C Ribosome quality control proteins C Other pre-60S particles B Other ribosome biogenesis factors C PTH_0895 Era; GTPase K03595 era; GTPase C PTH_0833 Obg; predicted GTPase K03979 obgE; GTPase [EC:3.6.5.-] # AProkaryotic type B Sno RNPs C Box C/D snoRNPs C Box H/ACA snoRNPs B rRNA transcription factors C PTH_1266 NusA; transcription elongation factor K02600 nusA; transcription termination/antitermination protein NusA C PTH_1179 NusB; transcription termination factor K03625 nusB; transcription antitermination protein NusB C PTH_0305 NusG; transcription antiterminator K02601 nusG; transcription termination/antitermination protein NusG B rRNA modification factors C 16S rRNA modification factors D PTH_1634 RsuA; 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] D PTH_0080 KsgA; dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D PTH_1788 Sun; tRNA and rRNA cytosine-C5-methylases K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D PTH_1754 N6-adenine-specific methylase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D PTH_0881 Uncharacterized protein conserved in bacteria K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D PTH_2915 GidB; predicted S-adenosylmethionine-dependent methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D PTH_1869 predicted S-adenosylmethionine-dependent methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D PTH_0066 predicted methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D PTH_1343 hypothetical protein K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242] D PTH_1197 predicted rRNA methylase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] C 23S rRNA modification factors D PTH_0299 SpoU; rRNA methylases K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D PTH_2857 uncharacterized conserved protein K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D PTH_1787 predicted Fe-S-cluster redox enzyme K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D PTH_1197 predicted rRNA methylase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D PTH_1518 TrmA; SAM-dependent methyltransferases K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D PTH_1818 RluA; pseudouridylate synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] B ribosomal protein modification factors C PTH_0743 RimI; acetyltransferases K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] C PTH_1720 RimM; RimM protein, required for 16S rRNA processing K02860 rimM; 16S rRNA processing protein RimM C PTH_1296 MiaB; 2-methylthioadenine synthetase K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4] C PTH_2329 uncharacterized conserved protein K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor C PTH_0880 PrmA; ribosomal protein L11 methylase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] B rRNA processing factors C PTH_1738 Rnc; dsRNA-specific ribonuclease K03685 rnc; ribonuclease III [EC:3.1.26.3] C PTH_0829 CafA; ribonucleases G and E K08301 rng; ribonuclease G [EC:3.1.26.-] C PTH_1065 predicted endonuclease K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] C PTH_0296 Uncharacterized protein conserved in bacteria K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-] B rRNA helicases B GTPases C PTH_0895 Era; GTPase K03595 era; GTPase C PTH_1780 predicted GTPase K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] C PTH_1609 predicted GTPase K03977 engA; GTPase C PTH_0833 Obg; predicted GTPase K03979 obgE; GTPase [EC:3.6.5.-] C PTH_1716 predicted GTPase K14540 rbgA; ribosome biogenesis GTPase A C PTH_2120 HflX; GTPase K03665 hflX; GTPase B Other maturation factors C PTH_2828 SUA5; putative translation factor K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] C PTH_1045 SpoT; guanosine polyphosphate pyrophosphohydrolases/synthetases K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] C PTH_1270 RbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A C PTH_1265 hypothetical protein K09748 rimP; ribosome maturation factor RimP C PTH_0837 Uncharacterized homolog of plant Iojap protein K09710 ybeB; ribosome-associated protein C PTH_0892 predicted metal-dependent hydrolase K07042 ybeY; probable rRNA maturation factor C PTH_2754 ribosome-associated protein Y K05808 hpf; ribosome hibernation promoting factor C PTH_0927 predicted GTPase, probable translation factor K06942 ychF; ribosome-binding ATPase C PTH_1748 predicted metal-binding protein K07040 yceD; DUF177 domain-containing protein # ARelated small nucleolar RNAs B Box C/D snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for 2'-O-ribose methylation B Box H/ACA snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for pseudouridynation B Other snoRNA ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 22, 2024