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#<h2><a href="/kegg/brite.html"><img src="/Fig/bget/kegg3.gif" align="middle" border=0></a>&nbsp; Transcription Machinery - Pseudomonas tolaasii</h2>
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A<b>Eukaryotic type</b>
B  RNA polymerase II system
C    RNA polymerase II
D      Core subunits
D      Pol II specific subunits
D      Pol I, II, III common subunits
D      Pol IV and V specific subunits
C    Basal transcription factors
D      TFIIA
D      TFIIB
D      TFIID
D      TFIIE
D      TFIIF
D      TFIIH
E        I7845_15275 ATP-dependent DNA helicase	K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] 
C    Mediator complex
D      Head
D      Middle
D      Tail
D      CDK-module
D      Other mediators
C    Coactivators
D      SAGA/TFTC/STAGA complex
D      BAF/PBAF complex
D      SWI/SNF complex
D      RSC complex
D      Others
C    Other transcription-related factors
D      Transcription elongation factors
D      Transcription termination factor
D      PAF1 complex
D      NELF complex
D      Super elongation complex (SEC)
D      Little elongation complex (LEC)
D      Brd4/P-TEFb complex
D      BUR kinase complex
D      CTDK-I complex
D      7SK RNP complex
D      DBIRD complex
D      Others
B  RNA polymerase III system
C    RNA polymerase III
D      Core subunits
D      Pol III specific subunits
D      Pol I, II, III common subunits
C    Basal transcription factors
D      TFIIIA
D      TFIIIB
D      TFIIIC
D      TFIIIC, fungi type
C    Other transcription-related factors
D      snRNA-activating protein complex (SNAPc)
D      Octamer transcription factors
D      Others
B  RNA polymerase I system
C    RNA polymerase I
D      Core subunits
D      Pol I specific subunits
D      Pol I, II, III common subunits
C    Basal transcription factors
D      SL1/TIF-1B
C    Other transcription-related factors
D      UBF
D      Transcription initiation factors
D      Transcription elongation factors
D      NoRC (nucleolar remodeling complex)
D      CTDK-I complex
D      Transcription termination factors
D      Others
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A<b>Prokaryotic type</b>
B  Bacterial type
C    RNA polymerase
D      Core subunits
E        I7845_25820 rpoA; DNA-directed RNA polymerase subunit alpha	K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] 
E        I7845_25980 rpoB; DNA-directed RNA polymerase subunit beta	K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] 
E        I7845_25975 rpoC; DNA-directed RNA polymerase subunit beta'	K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] 
E        I7845_28260 rpoZ; DNA-directed RNA polymerase subunit omega	K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] 
D      Sigma factors
E        I7845_26325 rpoD; RNA polymerase sigma factor RpoD	K03086 rpoD; RNA polymerase primary sigma factor 
E        I7845_06470 rpoS; RNA polymerase sigma factor RpoS	K03087 rpoS; RNA polymerase nonessential primary-like sigma factor 
E        I7845_18510 RNA polymerase sigma factor	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        I7845_21020 RNA polymerase sigma factor	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        I7845_21480 sigX; RNA polymerase sigma factor SigX	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        I7845_22470 RNA polymerase sigma factor	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        I7845_07230 rpoE; RNA polymerase sigma factor RpoE	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        I7845_07330 RNA polymerase sigma factor	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        I7845_26565 sigma-70 family RNA polymerase sigma factor	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        I7845_12195 sigma-70 family RNA polymerase sigma factor	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        I7845_00925 RNA polymerase sigma factor	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        I7845_19475 sigma-70 family RNA polymerase sigma factor	K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily 
E        I7845_22595 sigma-70 family RNA polymerase sigma factor	K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily 
E        I7845_26505 RNA polymerase sigma factor	K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily 
E        I7845_05320 sigma-70 family RNA polymerase sigma factor	K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily 
E        I7845_16225 sigma-70 family RNA polymerase sigma factor	K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily 
E        I7845_15535 sigma-70 family RNA polymerase sigma factor	K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily 
E        I7845_11060 sigma-70 family RNA polymerase sigma factor	K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily 
E        I7845_00630 sigma-70 family RNA polymerase sigma factor	K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily 
E        I7845_27190 rpoH; RNA polymerase sigma factor RpoH	K03089 rpoH; RNA polymerase sigma-32 factor 
E        I7845_04550 RNA polymerase factor sigma-54	K03092 rpoN; RNA polymerase sigma-54 factor 
E        I7845_20430 RNA polymerase sigma factor FliA	K02405 fliA; RNA polymerase sigma factor FliA 
C    Other transcription-related factors
D      RNA polymerase-associated proteins
E        I7845_06745 rapA; RNA polymerase-associated protein RapA	K03580 hepA; ATP-dependent helicase HepA [EC:5.6.2.-] 
E        I7845_24775 nusA; transcription termination/antitermination protein NusA	K02600 nusA; transcription termination/antitermination protein NusA 
E        I7845_25660 nusB; transcription antitermination factor NusB	K03625 nusB; transcription antitermination protein NusB 
E        I7845_26005 nusG; transcription termination/antitermination protein NusG	K02601 nusG; transcription termination/antitermination protein NusG 
E        I7845_04380 glutathione S-transferase N-terminal domain-containing protein	K03599 sspA; stringent starvation protein A 
E        I7845_04385 ClpXP protease specificity-enhancing factor	K03600 sspB; stringent starvation protein B 
E        I7845_16155 PAS domain-containing sensor histidine kinase	K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3] 
E        I7845_16150 alpha/beta hydrolase	K19707 rsbQ; sigma-B regulation protein RsbQ 
E        I7845_07235 anti-sigma factor	K03597 rseA; sigma-E factor negative regulatory protein RseA 
E        I7845_07240 MucB/RseB C-terminal domain-containing protein	K03598 rseB; sigma-E factor negative regulatory protein RseB 
D      Transcription elongation factors
E        I7845_24680 dksA; RNA polymerase-binding protein DksA	K06204 dksA; RNA polymerase-binding transcription factor 
E        I7845_28710 dksA; RNA polymerase-binding protein DksA	K06204 dksA; RNA polymerase-binding transcription factor 
E        I7845_11490 TraR/DksA C4-type zinc finger protein	K06204 dksA; RNA polymerase-binding transcription factor 
E        I7845_24835 greA; transcription elongation factor GreA	K03624 greA; transcription elongation factor GreA 
E        I7845_08295 greB; transcription elongation factor GreB	K04760 greB; transcription elongation factor GreB 
D      Transcription termination factor
E        I7845_27835 rho; transcription termination factor Rho	K03628 rho; transcription termination factor Rho 
B  Archaeal type
C    RNA polymerase
D      Core subunits
C    Basal transcription factors
D      TFB
D      TFE
D      TFS
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#Last updated: April 9, 2024