+D GENES KO
#
KEGG Orthology (KO) - Candidatus Paraimprobicoccus trichonymphae
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:ptrh00010]
D RsTaC01_0494 glucose-7-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RsTaC01_0733 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D RsTaC01_0023 type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RsTaC01_0224 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D RsTaC01_0016 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D RsTaC01_0073 pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D RsTaC01_0496 byfunctional acetaldehyde dehydrogenase/alcohol dehydrogenase AdhE K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D RsTaC01_0554 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RsTaC01_0248 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D RsTaC01_0264 PTS transporter subunit EIIC K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
C 00020 Citrate cycle (TCA cycle)
D RsTaC01_0073 pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
C 00030 Pentose phosphate pathway [PATH:ptrh00030]
D RsTaC01_0494 glucose-7-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RsTaC01_1111 ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D RsTaC01_0933 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D RsTaC01_0554 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
C 00040 Pentose and glucuronate interconversions [PATH:ptrh00040]
D RsTaC01_0293 UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D RsTaC01_0810 ribulose-5-phosphate reductase K05352 tarJ; ribitol-5-phosphate 2-dehydrogenase (NADP+) [EC:1.1.1.405]
D RsTaC01_0811 D-ribitol-5-phosphate cytidylyltransferase K21030 tarI; D-ribitol-5-phosphate cytidylyltransferase [EC:2.7.7.40]
C 00051 Fructose and mannose metabolism [PATH:ptrh00051]
D RsTaC01_0733 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D RsTaC01_1111 ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
C 00052 Galactose metabolism [PATH:ptrh00052]
D RsTaC01_0453 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RsTaC01_0293 UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D RsTaC01_0554 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
C 00053 Ascorbate and aldarate metabolism
C 00500 Starch and sucrose metabolism [PATH:ptrh00500]
D RsTaC01_0293 UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D RsTaC01_0248 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D RsTaC01_0264 PTS transporter subunit EIIC K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D RsTaC01_0554 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RsTaC01_0494 glucose-7-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:ptrh00520]
D RsTaC01_0248 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D RsTaC01_0516 glutamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D RsTaC01_0173 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D RsTaC01_0007 UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D RsTaC01_0209 NTP transferase domain-containing protein K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D RsTaC01_0647 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D RsTaC01_0805 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D RsTaC01_0280 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D RsTaC01_0264 PTS transporter subunit EIIC K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D RsTaC01_0554 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RsTaC01_0293 UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D RsTaC01_0453 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RsTaC01_0494 glucose-7-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00620 Pyruvate metabolism [PATH:ptrh00620]
D RsTaC01_0073 pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D RsTaC01_0496 byfunctional acetaldehyde dehydrogenase/alcohol dehydrogenase AdhE K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D RsTaC01_0057 acetate/propionate family kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00630 Glyoxylate and dicarboxylate metabolism
C 00640 Propanoate metabolism [PATH:ptrh00640]
D RsTaC01_0057 acetate/propionate family kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D RsTaC01_0120 methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3]
C 00650 Butanoate metabolism [PATH:ptrh00650]
D RsTaC01_0496 byfunctional acetaldehyde dehydrogenase/alcohol dehydrogenase AdhE K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D RsTaC01_0073 pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
C 00660 C5-Branched dibasic acid metabolism
C 00562 Inositol phosphate metabolism
D RsTaC01_0733 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:ptrh00190]
D RsTaC01_0414 V-type ATP synthase subunit A K02117 ATPVA; V/A-type H+/Na+-transporting ATPase subunit A [EC:7.1.2.2 7.2.2.1]
D RsTaC01_0413 V-type ATP synthase subunit B K02118 ATPVB; V/A-type H+/Na+-transporting ATPase subunit B
D RsTaC01_0495 V-type ATP synthase subunit D K02120 ATPVD; V/A-type H+/Na+-transporting ATPase subunit D
D RsTaC01_0416 ATP synthase subunit F K02122 ATPVF; V/A-type H+/Na+-transporting ATPase subunit F
D RsTaC01_0419 V-type ATP synthase subunit I K02123 ATPVI; V/A-type H+/Na+-transporting ATPase subunit I
D RsTaC01_0417 ATP synthase subunit C K02124 ATPVK; V/A-type H+/Na+-transporting ATPase subunit K
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:ptrh00710]
D RsTaC01_0224 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D RsTaC01_0023 type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RsTaC01_1111 ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D RsTaC01_0733 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 00720 Other carbon fixation pathways [PATH:ptrh00720]
D RsTaC01_0073 pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D RsTaC01_0943 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D RsTaC01_0099 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D RsTaC01_0057 acetate/propionate family kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00680 Methane metabolism [PATH:ptrh00680]
D RsTaC01_0057 acetate/propionate family kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D RsTaC01_0016 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
C 00910 Nitrogen metabolism
D RsTaC01_0282 NADPH-dependent glutamate synthase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
C 00920 Sulfur metabolism
D RsTaC01_0961 DHH family phosphoesterase K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:ptrh00061]
D RsTaC01_0130 acyl carrier protein K02078 acpP; acyl carrier protein
D RsTaC01_0854 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation
D RsTaC01_0496 byfunctional acetaldehyde dehydrogenase/alcohol dehydrogenase AdhE K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:ptrh00561]
D RsTaC01_0856 phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D RsTaC01_0966 glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D RsTaC01_0423 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D RsTaC01_0952 undecaprenol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D RsTaC01_0202 galactosyldiacylglycerol synthase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
D RsTaC01_1034 galactosyldiacylglycerol synthase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
C 00564 Glycerophospholipid metabolism [PATH:ptrh00564]
D RsTaC01_0756 glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D RsTaC01_0966 glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D RsTaC01_0423 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D RsTaC01_0952 undecaprenol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D RsTaC01_0548 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D RsTaC01_0873 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D RsTaC01_0046 CDP-alcohol phosphatidyltransferase family protein K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:ptrh00230]
D RsTaC01_0933 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D RsTaC01_0554 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RsTaC01_0135 peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D RsTaC01_0434 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D RsTaC01_1095 anaerobic ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D RsTaC01_0670 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00240 Pyrimidine metabolism [PATH:ptrh00240]
D RsTaC01_0405 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D RsTaC01_0501 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D RsTaC01_0602 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D RsTaC01_0704 pyrimidine-nucleoside phosphorylase K00756 pdp; pyrimidine-nucleoside phosphorylase [EC:2.4.2.2]
D RsTaC01_1095 anaerobic ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D RsTaC01_0432 thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D RsTaC01_0059 dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D RsTaC01_0977 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D RsTaC01_0695 FAD-dependent thymidylate synthase K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:ptrh00250]
D RsTaC01_0456 asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D RsTaC01_0684 asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D RsTaC01_0282 NADPH-dependent glutamate synthase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D RsTaC01_0516 glutamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
C 00260 Glycine, serine and threonine metabolism [PATH:ptrh00260]
D RsTaC01_0649 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D RsTaC01_0016 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
C 00270 Cysteine and methionine metabolism [PATH:ptrh00270]
D RsTaC01_0263 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D RsTaC01_0135 peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D RsTaC01_0897 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RsTaC01_0649 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
C 00280 Valine, leucine and isoleucine degradation
C 00290 Valine, leucine and isoleucine biosynthesis
C 00300 Lysine biosynthesis [PATH:ptrh00300]
D RsTaC01_0649 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D RsTaC01_0771 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D RsTaC01_0077 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D RsTaC01_1010 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D RsTaC01_0305 LL-diaminopimelate aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D RsTaC01_0166 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D RsTaC01_0165 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation
C 00220 Arginine biosynthesis
C 00330 Arginine and proline metabolism
C 00340 Histidine metabolism
C 00350 Tyrosine metabolism
D RsTaC01_0496 byfunctional acetaldehyde dehydrogenase/alcohol dehydrogenase AdhE K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00360 Phenylalanine metabolism
C 00380 Tryptophan metabolism
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis
D RsTaC01_0457 type II 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism
C 00430 Taurine and hypotaurine metabolism
D RsTaC01_0057 acetate/propionate family kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism
D RsTaC01_0640 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism
C 00470 D-Amino acid metabolism [PATH:ptrh00470]
D RsTaC01_0364 alanine racemase 1 K01775 alr; alanine racemase [EC:5.1.1.1]
D RsTaC01_0696 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RsTaC01_1131 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D RsTaC01_0056 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D RsTaC01_1010 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
C 00480 Glutathione metabolism
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:ptrh00541]
D RsTaC01_0293 UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D RsTaC01_0453 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RsTaC01_0007 UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D RsTaC01_0209 NTP transferase domain-containing protein K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
C 00550 Peptidoglycan biosynthesis [PATH:ptrh00550]
D RsTaC01_0647 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D RsTaC01_0805 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D RsTaC01_0280 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D RsTaC01_0370 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D RsTaC01_0056 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D RsTaC01_0166 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D RsTaC01_0696 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RsTaC01_0165 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D RsTaC01_0471 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D RsTaC01_0728 undecaprenyl-diphosphate K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D RsTaC01_1022 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D RsTaC01_0584 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D RsTaC01_0159 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D RsTaC01_0806 transglycosylase domain-containing protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D RsTaC01_0028 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D RsTaC01_0836 penicillin-binding protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D RsTaC01_0082 stage V sporulation protein D K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein)
D RsTaC01_0088 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D RsTaC01_1027 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D RsTaC01_0817 D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
C 00552 Teichoic acid biosynthesis [PATH:ptrh00552]
D RsTaC01_0728 undecaprenyl-diphosphate K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D RsTaC01_1022 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D RsTaC01_0337 LytR family transcriptional regulator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D RsTaC01_0202 galactosyldiacylglycerol synthase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
D RsTaC01_1034 galactosyldiacylglycerol synthase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
D RsTaC01_0708 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K25651 licD3; teichoic acid ribitol-phosphate transferase
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:ptrh00730]
D RsTaC01_0279 cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RsTaC01_0748 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D RsTaC01_1001 thiamine phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D RsTaC01_0670 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism
C 00750 Vitamin B6 metabolism
C 00760 Nicotinate and nicotinamide metabolism
D RsTaC01_0497 NAD(+)/NADH kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
C 00770 Pantothenate and CoA biosynthesis
D RsTaC01_0438 holo-ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
C 00780 Biotin metabolism [PATH:ptrh00780]
D RsTaC01_0854 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00785 Lipoic acid metabolism
C 00790 Folate biosynthesis [PATH:ptrh00790]
D RsTaC01_0498 bifunctional folylpolyglutamate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
C 00670 One carbon pool by folate [PATH:ptrh00670]
D RsTaC01_0943 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D RsTaC01_0099 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D RsTaC01_1025 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D RsTaC01_0695 FAD-dependent thymidylate synthase K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism
D RsTaC01_0740 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:ptrh00900]
D RsTaC01_0748 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D RsTaC01_1017 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D RsTaC01_0862 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D RsTaC01_1074 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D RsTaC01_0481 flavodoxin-dependent (E)-4-hydroxy-3 methylbut-2-enyl-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D RsTaC01_0361 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D RsTaC01_0471 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
D RsTaC01_0113 glycosyl-4,4'-diaponeurosporenoate acyltransferase K10212 K10212; glycosyl-4,4'-diaponeurosporenoate acyltransferase [EC:2.3.1.-]
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis
C 00261 Monobactam biosynthesis [PATH:ptrh00261]
D RsTaC01_0649 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D RsTaC01_0771 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D RsTaC01_0077 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis
D RsTaC01_0554 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
C 00525 Acarbose and validamycin biosynthesis
C 00401 Novobiocin biosynthesis
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
C 00333 Prodigiosin biosynthesis
D RsTaC01_0854 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D RsTaC01_0130 acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites
D RsTaC01_0263 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation
C 00627 Aminobenzoate degradation
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:ptrh00625]
D RsTaC01_0496 byfunctional acetaldehyde dehydrogenase/alcohol dehydrogenase AdhE K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation [PATH:ptrh00626]
D RsTaC01_0496 byfunctional acetaldehyde dehydrogenase/alcohol dehydrogenase AdhE K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:ptrh03020]
D RsTaC01_0766 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D RsTaC01_0767 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D RsTaC01_0663 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D RsTaC01_0433 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
D RsTaC01_0143 hypothetical protein K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:ptrh03010]
D RsTaC01_0051 S1 RNA-binding domain-containing protein K02945 RP-S1; small subunit ribosomal protein S1
D RsTaC01_0639 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D RsTaC01_0577 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D RsTaC01_0664 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D RsTaC01_0674 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D RsTaC01_0445 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D RsTaC01_1051 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D RsTaC01_0677 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D RsTaC01_0973 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D RsTaC01_0570 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D RsTaC01_0665 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D RsTaC01_1052 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D RsTaC01_0666 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D RsTaC01_0678 type Z 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D RsTaC01_0594 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D RsTaC01_0192 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D RsTaC01_0580 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D RsTaC01_0443 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D RsTaC01_0575 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D RsTaC01_0194 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D RsTaC01_0574 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D RsTaC01_0571 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D RsTaC01_0572 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D RsTaC01_0679 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D RsTaC01_0676 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D RsTaC01_0243 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D RsTaC01_0060 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D RsTaC01_0242 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D RsTaC01_0195 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D RsTaC01_0974 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D RsTaC01_0006 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D RsTaC01_0672 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D RsTaC01_0578 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D RsTaC01_0662 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D RsTaC01_0675 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D RsTaC01_0511 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D RsTaC01_1115 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D RsTaC01_0179 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D RsTaC01_0576 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D RsTaC01_0573 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D RsTaC01_0680 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D RsTaC01_0181 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D RsTaC01_0176 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D RsTaC01_0579 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D RsTaC01_0673 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D RsTaC01_1065 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D RsTaC01_0646 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D RsTaC01_0198 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D RsTaC01_0439 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D RsTaC01_1114 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D RsTaC01_0667 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
C 00970 Aminoacyl-tRNA biosynthesis [PATH:ptrh00970]
D RsTaC01_0740 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RsTaC01_0286 Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D RsTaC01_0938 Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D RsTaC01_0407 Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D RsTaC01_0706 glutamine--tRNA ligase/YqeY domain fusion protein K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D RsTaC01_0273 alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D RsTaC01_0271 aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RsTaC01_1048 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D RsTaC01_0749 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D RsTaC01_1038 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D RsTaC01_0872 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D RsTaC01_0640 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D RsTaC01_1025 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D RsTaC01_0758 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D RsTaC01_1041 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RsTaC01_0644 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D RsTaC01_0306 lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D RsTaC01_0171 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RsTaC01_0701 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D RsTaC01_0119 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D RsTaC01_0555 phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D RsTaC01_0493 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D RsTaC01_1046 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RsTaC01_0117 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:ptrh03060]
D RsTaC01_0671 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D RsTaC01_0197 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D RsTaC01_0994 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D RsTaC01_1082 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D RsTaC01_0491 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RsTaC01_0191 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D RsTaC01_0507 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D RsTaC01_0031 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D RsTaC01_0510 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:ptrh04122]
D RsTaC01_0279 cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RsTaC01_0189 tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
C 03050 Proteasome
C 03018 RNA degradation [PATH:ptrh03018]
D RsTaC01_0859 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D RsTaC01_0213 ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-]
D RsTaC01_0603 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D RsTaC01_0638 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D RsTaC01_0772 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:ptrh03030]
D RsTaC01_0711 PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D RsTaC01_1128 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RsTaC01_0624 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RsTaC01_0881 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RsTaC01_0995 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D RsTaC01_0254 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D RsTaC01_0444 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RsTaC01_0324 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RsTaC01_0976 NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:ptrh03410]
D RsTaC01_0732 DNA-3-methyladenine glycosylase 2 family protein K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
D RsTaC01_0807 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D RsTaC01_0050 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D RsTaC01_0965 deoxyribonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D RsTaC01_0324 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RsTaC01_0595 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D RsTaC01_0976 NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:ptrh03420]
D RsTaC01_1068 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RsTaC01_0324 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RsTaC01_0976 NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:ptrh03430]
D RsTaC01_0781 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D RsTaC01_0761 DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D RsTaC01_1068 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RsTaC01_0595 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D RsTaC01_0444 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RsTaC01_0711 PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D RsTaC01_0881 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RsTaC01_1128 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RsTaC01_0624 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RsTaC01_0976 NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:ptrh03440]
D RsTaC01_0595 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D RsTaC01_0444 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RsTaC01_0490 recombinase RecA K03553 recA; recombination protein RecA
D RsTaC01_0324 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RsTaC01_0699 Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D RsTaC01_0174 Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D RsTaC01_0700 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D RsTaC01_0297 ATP-dependent RecD-like DNA helicase K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D RsTaC01_0711 PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D RsTaC01_0881 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RsTaC01_1128 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RsTaC01_0624 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RsTaC01_1029 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:ptrh02010]
D RsTaC01_0581 spermidine/putrescine ABC transporter substrate-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D RsTaC01_0183 ABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein
D RsTaC01_0283 ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein
D RsTaC01_0267 polyamine ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D RsTaC01_0878 polar amino acid transport system substrate-binding protein K10036 glnH; glutamine transport system substrate-binding protein
D RsTaC01_0946 glutamine ABC transporter permease K17077 artQ; arginine/lysine/histidine transport system permease protein
D RsTaC01_0947 glutamine ABC transporter ATP-binding protein K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D RsTaC01_0258 metal ABC transporter permease K09816 znuB; zinc transport system permease protein
D RsTaC01_1003 metal ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D RsTaC01_0342 energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein
D RsTaC01_0137 energy-coupling factor transporter ATPase K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D RsTaC01_0867 energy-coupling factor transporter ATPase K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D RsTaC01_0770 sodium ABC transporter K09696 natB; sodium transport system permease protein
D RsTaC01_0840 sodium export ATP-binding protein natA K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D RsTaC01_0715 FtsX-like permease family protein K09811 ftsX; cell division transport system permease protein
D RsTaC01_0714 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
C 02060 Phosphotransferase system (PTS) [PATH:ptrh02060]
D RsTaC01_0010 phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D RsTaC01_0009 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D RsTaC01_0746 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D RsTaC01_0248 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D RsTaC01_0264 PTS transporter subunit EIIC K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
C 03070 Bacterial secretion system [PATH:ptrh03070]
D RsTaC01_0197 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D RsTaC01_0994 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D RsTaC01_0671 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D RsTaC01_1082 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D RsTaC01_0491 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RsTaC01_0507 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D RsTaC01_0191 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:ptrh02020]
D RsTaC01_0618 response regulator transcription factor K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D RsTaC01_0817 D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D RsTaC01_0654 sporulation transcription factor Spo0A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A
D RsTaC01_0840 sodium export ATP-binding protein natA K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D RsTaC01_0770 sodium ABC transporter K09696 natB; sodium transport system permease protein
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:ptrh02024]
D RsTaC01_0197 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D RsTaC01_0994 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D RsTaC01_0671 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D RsTaC01_1082 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D RsTaC01_0491 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RsTaC01_0507 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D RsTaC01_0191 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D RsTaC01_0654 sporulation transcription factor Spo0A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
C 02040 Flagellar assembly
D RsTaC01_0255 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:ptrh01501]
D RsTaC01_0806 transglycosylase domain-containing protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D RsTaC01_0028 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D RsTaC01_0836 penicillin-binding protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:ptrh01502]
D RsTaC01_0696 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RsTaC01_0364 alanine racemase 1 K01775 alr; alanine racemase [EC:5.1.1.1]
D RsTaC01_0165 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D RsTaC01_0584 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D RsTaC01_0159 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D RsTaC01_0817 D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:ptrh01503]
D RsTaC01_0037 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D RsTaC01_0880 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:ptrh01000]
C 01001 Protein kinases [BR:ptrh01001]
D RsTaC01_0566 PASTA domain-containing protein K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D RsTaC01_0815 Ser/Thr-protein kinase PrkC K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
C 01009 Protein phosphatases and associated proteins [BR:ptrh01009]
D RsTaC01_0533 Stp1/IreP family PP2C-type Ser/Thr phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
C 01002 Peptidases and inhibitors [BR:ptrh01002]
D RsTaC01_0367 sigma-E processing peptidase SpoIIGA K06383 spoIIGA; stage II sporulation protein GA (sporulation sigma-E factor processing peptidase) [EC:3.4.23.-]
D RsTaC01_0516 glutamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D RsTaC01_0456 asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D RsTaC01_0684 asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D RsTaC01_0136 DJ-1/PfpI family protein K03152 thiJ; protein deglycase [EC:3.5.1.124]
D RsTaC01_0623 class B sortase K08600 srtB; sortase B [EC:3.4.22.71]
D RsTaC01_0472 S-layer homology domain-containing protein K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D RsTaC01_0484 gamma-D-glutamyl-meso-diaminopimelate peptidase K01308 yqgT; g-D-glutamyl-meso-diaminopimelate peptidase [EC:3.4.19.11]
D RsTaC01_0817 D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D RsTaC01_0669 type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D RsTaC01_0685 ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D RsTaC01_0236 site-2 protease family protein K06402 spoIVFB; stage IV sporulation protein FB [EC:3.4.24.-]
D RsTaC01_0509 site-2 protease family protein K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D RsTaC01_0088 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D RsTaC01_1027 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D RsTaC01_1109 ATP-dependent Clp endopeptidase proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D RsTaC01_1107 endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D RsTaC01_0031 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D RsTaC01_0510 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D RsTaC01_0981 SpoIVB peptidase K06399 spoIVB; stage IV sporulation protein B [EC:3.4.21.116]
D RsTaC01_0411 LD-carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D RsTaC01_0396 HK97 family phage prohead protease K06904 GP4; Escherichia/Staphylococcus phage prohead protease
D RsTaC01_0905 HK97 family phage prohead protease K06904 GP4; Escherichia/Staphylococcus phage prohead protease
C 01003 Glycosyltransferases [BR:ptrh01003]
D RsTaC01_0202 galactosyldiacylglycerol synthase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
D RsTaC01_1034 galactosyldiacylglycerol synthase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
D RsTaC01_0806 transglycosylase domain-containing protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:ptrh01005]
D RsTaC01_0026 glycosyltransferase family 2 protein K12999 rgpI; glucosyltransferase [EC:2.4.1.-]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:ptrh01011]
D RsTaC01_0647 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D RsTaC01_0805 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D RsTaC01_0280 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D RsTaC01_0370 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D RsTaC01_0056 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D RsTaC01_0166 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D RsTaC01_0696 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RsTaC01_0364 alanine racemase 1 K01775 alr; alanine racemase [EC:5.1.1.1]
D RsTaC01_1131 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D RsTaC01_0411 LD-carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D RsTaC01_0584 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D RsTaC01_0159 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D RsTaC01_0728 undecaprenyl-diphosphate K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D RsTaC01_1022 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D RsTaC01_0806 transglycosylase domain-containing protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D RsTaC01_0028 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D RsTaC01_0836 penicillin-binding protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D RsTaC01_0082 stage V sporulation protein D K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein)
D RsTaC01_0088 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D RsTaC01_1027 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D RsTaC01_0817 D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D RsTaC01_0623 class B sortase K08600 srtB; sortase B [EC:3.4.22.71]
D RsTaC01_0519 endolytic transglycosylase MltG K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D RsTaC01_1071 stage II sporulation protein D K06381 spoIID; stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:4.2.2.29]
D RsTaC01_0037 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D RsTaC01_0880 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:ptrh01004]
D RsTaC01_0854 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RsTaC01_0856 phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D RsTaC01_0966 glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D RsTaC01_0423 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:ptrh01006]
D RsTaC01_0471 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D RsTaC01_0447 tRNA (adenosine(37)-N6)-dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
C 01007 Amino acid related enzymes [BR:ptrh01007]
D RsTaC01_0740 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RsTaC01_0706 glutamine--tRNA ligase/YqeY domain fusion protein K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D RsTaC01_1046 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RsTaC01_0117 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D RsTaC01_0872 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D RsTaC01_0171 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RsTaC01_0640 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D RsTaC01_0644 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D RsTaC01_0758 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D RsTaC01_1041 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RsTaC01_0306 lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D RsTaC01_0271 aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RsTaC01_0119 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D RsTaC01_1048 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D RsTaC01_1038 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D RsTaC01_0701 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D RsTaC01_0749 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D RsTaC01_0273 alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D RsTaC01_0555 phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D RsTaC01_0493 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D RsTaC01_0305 LL-diaminopimelate aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:ptrh03000]
D RsTaC01_0897 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RsTaC01_0143 hypothetical protein K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
D RsTaC01_0760 helix-turn-helix domain-containing protein K02647 cdaR; carbohydrate diacid regulator
D RsTaC01_0636 heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
C 03021 Transcription machinery [BR:ptrh03021]
D RsTaC01_0143 hypothetical protein K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
D RsTaC01_0663 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D RsTaC01_0766 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D RsTaC01_0767 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D RsTaC01_0433 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D RsTaC01_0255 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D RsTaC01_0002 sigma-70 family RNA polymerase sigma factor K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D RsTaC01_0368 RNA polymerase sporulation sigma factor SigE K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D RsTaC01_0474 RNA polymerase sporulation sigma factor SigK K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D RsTaC01_0552 RNA polymerase sporulation sigma factor SigG K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D RsTaC01_0894 RNA polymerase sporulation sigma factor SigE K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D RsTaC01_0237 transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D RsTaC01_0931 transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D RsTaC01_0196 transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D RsTaC01_0315 SpoIIE family protein phosphatase K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D RsTaC01_0129 anti-sigma factor antagonist K04749 rsbV; anti-sigma B factor antagonist
D RsTaC01_0365 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
C 03019 Messenger RNA biogenesis [BR:ptrh03019]
D RsTaC01_0347 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D RsTaC01_0603 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D RsTaC01_0213 ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-]
D RsTaC01_0859 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D RsTaC01_0638 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D RsTaC01_0772 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
C 03041 Spliceosome
C 03011 Ribosome [BR:ptrh03011]
D RsTaC01_0051 S1 RNA-binding domain-containing protein K02945 RP-S1; small subunit ribosomal protein S1
D RsTaC01_0639 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D RsTaC01_0577 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D RsTaC01_0664 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D RsTaC01_0674 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D RsTaC01_0445 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D RsTaC01_1051 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D RsTaC01_0677 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D RsTaC01_0973 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D RsTaC01_0570 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D RsTaC01_0665 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D RsTaC01_1052 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D RsTaC01_0666 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D RsTaC01_0678 type Z 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D RsTaC01_0594 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D RsTaC01_0192 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D RsTaC01_0580 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D RsTaC01_0443 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D RsTaC01_0575 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D RsTaC01_0194 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D RsTaC01_0574 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D RsTaC01_0571 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D RsTaC01_0572 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D RsTaC01_0679 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D RsTaC01_0676 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D RsTaC01_0060 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D RsTaC01_0242 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D RsTaC01_0195 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D RsTaC01_0243 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D RsTaC01_0974 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D RsTaC01_0006 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D RsTaC01_0672 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D RsTaC01_0578 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D RsTaC01_0662 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D RsTaC01_0675 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D RsTaC01_0511 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D RsTaC01_1115 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D RsTaC01_0179 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D RsTaC01_0576 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D RsTaC01_0573 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D RsTaC01_0680 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D RsTaC01_0181 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D RsTaC01_0176 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D RsTaC01_0579 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D RsTaC01_0673 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D RsTaC01_1065 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D RsTaC01_0646 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D RsTaC01_0198 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D RsTaC01_0439 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D RsTaC01_1114 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D RsTaC01_0667 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
C 03009 Ribosome biogenesis [BR:ptrh03009]
D RsTaC01_0347 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D RsTaC01_0957 GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-]
D RsTaC01_0237 transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D RsTaC01_0931 transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D RsTaC01_0196 transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D RsTaC01_0648 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6)) -dimethyltransferase RsmA K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D RsTaC01_0063 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D RsTaC01_0547 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D RsTaC01_0025 Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D RsTaC01_0967 ribosome biogenesis GTPase Der K03977 engA; GTPase
D RsTaC01_0030 ribosome biogenesis GTPase YlqF K14540 rbgA; ribosome biogenesis GTPase A
D RsTaC01_1014 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D RsTaC01_1055 30S ribosome-binding factor RbfA K02834 rbfA; ribosome-binding factor A
D RsTaC01_0953 rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor
D RsTaC01_0062 redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase
C 03016 Transfer RNA biogenesis [BR:ptrh03016]
D RsTaC01_0740 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RsTaC01_0701 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D RsTaC01_0644 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D RsTaC01_1041 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RsTaC01_0640 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D RsTaC01_0706 glutamine--tRNA ligase/YqeY domain fusion protein K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D RsTaC01_0171 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RsTaC01_0306 lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D RsTaC01_0271 aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RsTaC01_0273 alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D RsTaC01_1048 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D RsTaC01_0749 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D RsTaC01_1038 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D RsTaC01_0872 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D RsTaC01_0758 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D RsTaC01_0119 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D RsTaC01_0555 phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D RsTaC01_0493 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D RsTaC01_1046 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RsTaC01_0117 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D RsTaC01_0620 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D RsTaC01_0726 tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D RsTaC01_0279 cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RsTaC01_1014 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D RsTaC01_0447 tRNA (adenosine(37)-N6)-dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D RsTaC01_0229 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D RsTaC01_0071 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D RsTaC01_0440 ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D RsTaC01_0978 nucleoside deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D RsTaC01_0104 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D RsTaC01_0096 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase MtaB K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
D RsTaC01_0790 tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D RsTaC01_0189 tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D RsTaC01_0963 tRNA lysidine(34) synthetase TilS K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D RsTaC01_0406 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D RsTaC01_0362 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D RsTaC01_0859 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:ptrh03012]
D RsTaC01_0935 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D RsTaC01_1113 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D RsTaC01_0161 elongation factor Ts K02357 tsf; elongation factor Ts
D RsTaC01_0333 elongation factor Tu K02358 tuf; elongation factor Tu
D RsTaC01_1040 elongation factor G K02355 fusA; elongation factor G
D RsTaC01_0499 peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D RsTaC01_0116 ribosome recycling factor K02838 frr; ribosome recycling factor
D RsTaC01_1119 peptide chain release factor N(5)-glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D RsTaC01_0759 aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D RsTaC01_0951 elongation factor P K02356 efp; elongation factor P
D RsTaC01_1012 peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
C 03110 Chaperones and folding catalysts [BR:ptrh03110]
D RsTaC01_1108 ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D RsTaC01_0638 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D RsTaC01_0772 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RsTaC01_0980 molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D RsTaC01_0637 nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D RsTaC01_0988 Hsp20/alpha crystallin family protein K13993 HSP20; HSP20 family protein
D RsTaC01_0773 co-chaperone GroES K04078 groES; chaperonin GroES
D RsTaC01_0685 ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
C 04131 Membrane trafficking [BR:ptrh04131]
D RsTaC01_0023 type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
C 04121 Ubiquitin system
C 03051 Proteasome
C 03032 DNA replication proteins [BR:ptrh03032]
D RsTaC01_0897 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RsTaC01_1015 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D RsTaC01_0995 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D RsTaC01_0605 DNA replication protein DnaC K02315 dnaC; DNA replication protein DnaC
D RsTaC01_0254 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D RsTaC01_0444 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RsTaC01_0711 PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D RsTaC01_0881 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RsTaC01_0624 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RsTaC01_1128 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RsTaC01_0324 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RsTaC01_0976 NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D RsTaC01_0035 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D RsTaC01_0982 DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D RsTaC01_0786 type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:ptrh03036]
D RsTaC01_0897 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RsTaC01_0347 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D RsTaC01_1015 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D RsTaC01_0714 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D RsTaC01_0588 FtsW/RodA/SpoVE family cell cycle protein K03588 ftsW; cell division protein FtsW
D RsTaC01_0715 FtsX-like permease family protein K09811 ftsX; cell division transport system permease protein
D RsTaC01_1066 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D RsTaC01_0037 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D RsTaC01_0880 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D RsTaC01_0302 DivIVA domain-containing protein K04074 divIVA; cell division initiation protein
D RsTaC01_0303 cell division protein SepF K09772 sepF; cell division inhibitor SepF
D RsTaC01_0718 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D RsTaC01_0721 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D RsTaC01_0971 FtsW/RodA/SpoVE family cell cycle protein K05837 rodA; rod shape determining protein RodA
D RsTaC01_0071 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D RsTaC01_0902 Fic family protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
C 03400 DNA repair and recombination proteins [BR:ptrh03400]
D RsTaC01_0732 DNA-3-methyladenine glycosylase 2 family protein K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
D RsTaC01_0807 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D RsTaC01_0059 dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D RsTaC01_0050 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D RsTaC01_0965 deoxyribonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D RsTaC01_0595 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D RsTaC01_0976 NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D RsTaC01_0324 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RsTaC01_1068 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RsTaC01_0766 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D RsTaC01_0767 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D RsTaC01_0663 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D RsTaC01_0433 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D RsTaC01_0781 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D RsTaC01_0761 DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D RsTaC01_0711 PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D RsTaC01_0881 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RsTaC01_0624 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RsTaC01_1128 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RsTaC01_0444 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RsTaC01_0297 ATP-dependent RecD-like DNA helicase K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D RsTaC01_0490 recombinase RecA K03553 recA; recombination protein RecA
D RsTaC01_0699 Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D RsTaC01_0174 Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D RsTaC01_0700 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D RsTaC01_1029 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D RsTaC01_0218 DNA repair exonuclease K03547 sbcD; DNA repair protein SbcD/Mre11
D RsTaC01_0736 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D RsTaC01_0430 helicase-exonuclease AddAB subunit AddA K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
D RsTaC01_0021 PD-(D/E)XK nuclease family protein K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
D RsTaC01_0035 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D RsTaC01_0982 DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D RsTaC01_0786 type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D RsTaC01_1015 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D RsTaC01_0380 recombinase RecT K07455 recT; recombination protein RecT
D RsTaC01_0961 DHH family phosphoesterase K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:ptrh03029]
D RsTaC01_0935 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D RsTaC01_1113 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D RsTaC01_0161 elongation factor Ts K02357 tsf; elongation factor Ts
D RsTaC01_0333 elongation factor Tu K02358 tuf; elongation factor Tu
D RsTaC01_1040 elongation factor G K02355 fusA; elongation factor G
D RsTaC01_1046 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RsTaC01_1041 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RsTaC01_0271 aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RsTaC01_1048 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D RsTaC01_0171 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RsTaC01_0286 Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D RsTaC01_0938 Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D RsTaC01_0407 Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D RsTaC01_0444 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RsTaC01_0638 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D RsTaC01_0637 nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D RsTaC01_0772 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RsTaC01_0773 co-chaperone GroES K04078 groES; chaperonin GroES
D RsTaC01_0980 molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D RsTaC01_0279 cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:ptrh02000]
D RsTaC01_0694 thiamine ABC transporter permease K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D RsTaC01_0581 spermidine/putrescine ABC transporter substrate-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D RsTaC01_0183 ABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein
D RsTaC01_0283 ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein
D RsTaC01_0267 polyamine ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D RsTaC01_0251 ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D RsTaC01_0478 ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D RsTaC01_0249 ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D RsTaC01_0250 ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D RsTaC01_0878 polar amino acid transport system substrate-binding protein K10036 glnH; glutamine transport system substrate-binding protein
D RsTaC01_0946 glutamine ABC transporter permease K17077 artQ; arginine/lysine/histidine transport system permease protein
D RsTaC01_0947 glutamine ABC transporter ATP-binding protein K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D RsTaC01_0097 ABC transporter substrate-binding protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein
D RsTaC01_0098 ABC transporter substrate-binding protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein
D RsTaC01_0162 ABC transporter substrate-binding protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein
D RsTaC01_0223 ABC transporter permease K05832 K05832; putative tryptophan/tyrosine transport system permease protein
D RsTaC01_0764 ABC transporter ATP-binding protein K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein
D RsTaC01_0877 polar amino acid transport system ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D RsTaC01_0258 metal ABC transporter permease K09816 znuB; zinc transport system permease protein
D RsTaC01_1003 metal ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D RsTaC01_0993 ECF transporter S component K16927 cbrT; energy-coupling factor transport system substrate-specific component
D RsTaC01_0342 energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein
D RsTaC01_0137 energy-coupling factor transporter ATPase K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D RsTaC01_0867 energy-coupling factor transporter ATPase K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D RsTaC01_0885 zinc ABC transporter substrate-binding protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein
D RsTaC01_0770 sodium ABC transporter K09696 natB; sodium transport system permease protein
D RsTaC01_0840 sodium export ATP-binding protein natA K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D RsTaC01_0240 ABC transporter permease K25151 gldF; gliding motility-associated transport system permease protein
D RsTaC01_0241 ABC transporter ATP-binding protein K25152 gldA; gliding motility-associated transport system ATP-binding protein
D RsTaC01_0715 FtsX-like permease family protein K09811 ftsX; cell division transport system permease protein
D RsTaC01_0714 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D RsTaC01_0177 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D RsTaC01_0178 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RsTaC01_0010 phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D RsTaC01_0009 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D RsTaC01_0746 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D RsTaC01_0248 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D RsTaC01_0264 PTS transporter subunit EIIC K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D RsTaC01_0789 magnesium transporter CorA family protein K03284 corA; magnesium transporter
D RsTaC01_1021 sodium:proton antiporter K18218 tet35; tetracycline resistance efflux pump
D RsTaC01_0092 stage V sporulation protein B K06409 spoVB; stage V sporulation protein B
D RsTaC01_0253 AzlD domain-containing protein K26606 azlD; branched chain amino acid efflux pump
D RsTaC01_0049 ECF transporter S component K23675 fmnP; riboflavin transporter
D RsTaC01_0621 ECF transporter S component K23675 fmnP; riboflavin transporter
D RsTaC01_0656 energy-coupled thiamine transporter ThiT K16789 thiT; thiamine transporter
D RsTaC01_0588 FtsW/RodA/SpoVE family cell cycle protein K03588 ftsW; cell division protein FtsW
D RsTaC01_0661 sodium-translocating pyrophosphatase K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1]
D RsTaC01_1033 ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A
D RsTaC01_1032 ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
C 02044 Secretion system [BR:ptrh02044]
D RsTaC01_0861 MBL fold metallo-hydrolase K02238 comEC; competence protein ComEC
D RsTaC01_0491 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RsTaC01_0197 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D RsTaC01_0994 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D RsTaC01_0671 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D RsTaC01_0191 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D RsTaC01_0507 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D RsTaC01_1082 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
C 02042 Bacterial toxins [BR:ptrh02042]
D RsTaC01_1097 hemolysin III family protein K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:ptrh02022]
D RsTaC01_0618 response regulator transcription factor K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D RsTaC01_0654 sporulation transcription factor Spo0A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A
C 02035 Bacterial motility proteins
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:ptrh04812]
D RsTaC01_0718 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D RsTaC01_1066 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
C 04147 Exosome [BR:ptrh04147]
D RsTaC01_0023 type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RsTaC01_0224 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D RsTaC01_0772 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RsTaC01_0638 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D RsTaC01_0494 glucose-7-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RsTaC01_0333 elongation factor Tu K02358 tuf; elongation factor Tu
D RsTaC01_0620 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D RsTaC01_0670 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D RsTaC01_0733 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 02048 Prokaryotic defense system [BR:ptrh02048]
D RsTaC01_0897 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RsTaC01_1118 type II toxin-antitoxin system PemK/MazF family toxin K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D RsTaC01_0865 type II toxin-antitoxin system Txe/YoeB family toxin K19158 yoeB; toxin YoeB [EC:3.1.-.-]
D RsTaC01_0864 type II toxin-antitoxin system Phd/YefM family antitoxin K19159 yefM; antitoxin YefM
D RsTaC01_1066 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D RsTaC01_0718 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D RsTaC01_0740 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RsTaC01_0279 cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:ptrh01504]
D RsTaC01_1021 sodium:proton antiporter K18218 tet35; tetracycline resistance efflux pump
D RsTaC01_0817 D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D RsTaC01_1094 anaerobic ribonucleoside-triphosphate reductase activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D RsTaC01_0792 DAK2 domain-containing protein K07030 fakA; fatty acid kinase [EC:2.7.2.18]
D RsTaC01_0261 TIGR00159 family protein K18672 dacA; diadenylate cyclase [EC:2.7.7.85]
D RsTaC01_0001 anti-sigma F factor K06379 spoIIAB; stage II sporulation protein AB (anti-sigma F factor) [EC:2.7.11.1]
D RsTaC01_0427 stage II sporulation protein E K06382 spoIIE; stage II sporulation protein E [EC:3.1.3.16]
D RsTaC01_0003 tyrosine-protein phosphatase K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D RsTaC01_0753 YchF/TatD family DNA exonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D RsTaC01_1024 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D RsTaC01_0842 cation-translocating P-type ATPase K12952 ctpE; cation-transporting P-type ATPase E [EC:7.2.2.-]
C 99981 Carbohydrate metabolism
C 99982 Energy metabolism
D RsTaC01_1130 ferredoxin K05337 fer; ferredoxin
D RsTaC01_0797 Fe-S cluster assembly scaffold protein NifU K04488 iscU; nitrogen fixation protein NifU and related proteins
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
C 99986 Glycan metabolism
D RsTaC01_0625 flippase-like domain-containing protein K07027 K07027; glycosyltransferase 2 family protein
C 99987 Cofactor metabolism
C 99988 Secondary metabolism
C 99999 Others
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
C 99974 Translation
D RsTaC01_0480 S1 RNA-binding domain-containing protein K07571 K07571; S1 RNA binding domain protein
C 99975 Protein processing
D RsTaC01_0512 trigger factor K03545 tig; trigger factor
D RsTaC01_0277 SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein
C 99976 Replication and repair
D RsTaC01_0754 YraN family protein K07460 yraN; putative endonuclease
D RsTaC01_0066 DNA-protecting protein DprA K04096 smf; DNA processing protein
D RsTaC01_0928 replication-associated recombination protein A K07478 ycaJ; putative ATPase
C 99979 Viral proteins
C 99998 Others
D RsTaC01_1127 YbaB/EbfC family nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D RsTaC01_0363 ATP/ADP translocase K03301 TC.AAA; ATP:ADP antiporter, AAA family
D RsTaC01_1080 alanine:cation symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
C 99978 Cell growth
D RsTaC01_0794 spore coat protein CotJB K06333 cotJB; spore coat protein JB
D RsTaC01_0793 manganese catalase family protein K06334 cotJC; spore coat protein JC
D RsTaC01_0813 spore maturation protein A K06373 spmA; spore maturation protein A
D RsTaC01_0814 spore maturation protein K06374 spmB; spore maturation protein B
D RsTaC01_1133 anti-sigma factor antagonist K06378 spoIIAA; stage II sporulation protein AA (anti-sigma F factor antagonist)
D RsTaC01_0357 stage II sporulation protein P K06385 spoIIP; stage II sporulation protein P
D RsTaC01_0964 stage II sporulation protein R K06387 spoIIR; stage II sporulation protein R
D RsTaC01_0688 stage IV sporulation protein A K06398 spoIVA; stage IV sporulation protein A
D RsTaC01_0500 stage V sporulation protein AC K06405 spoVAC; stage V sporulation protein AC
D RsTaC01_0839 stage V sporulation protein AD K06406 spoVAD; stage V sporulation protein AD
D RsTaC01_0488 stage V sporulation protein AE K06407 spoVAE; stage V sporulation protein AE
D RsTaC01_0246 dipicolinate synthase subunit DpsA K06410 spoVFA; dipicolinate synthase subunit A
D RsTaC01_0247 dipicolinate synthase subunit B K06411 spoVFB; dipicolinate synthase subunit B
D RsTaC01_0954 sporulation protein YqfD K06438 yqfD; similar to stage IV sporulation protein
D RsTaC01_0301 spore germination protein K06295 gerKA; spore germination protein KA
C 99993 Cell motility
C 99995 Signaling proteins
D RsTaC01_0127 translational GTPase TypA K06207 typA; GTP-binding protein
C 99992 Structural proteins
C 99994 Others
B
B 09194 Poorly characterized
C 99996 General function prediction only
D RsTaC01_0610 PHP domain-containing protein K04477 ycdX; putative hydrolase
D RsTaC01_0085 YihY/virulence factor BrkB family protein K07058 K07058; membrane protein
D RsTaC01_0334 LemA family protein K03744 lemA; LemA protein
C 99997 Function unknown
D RsTaC01_0796 thioether cross-link-forming SCIFF peptide maturase K06871 K06871; uncharacterized protein
D RsTaC01_0335 TPM domain-containing protein K06872 K06872; uncharacterized protein
D RsTaC01_1077 GPW/gp25 family protein K06903 W; Bacteriophage baseplate protein W
D RsTaC01_0041 phage tail sheath subtilisin-like domain-containing protein K06907 FI; Bacteriophage tail sheath protein
D RsTaC01_1089 zinc metallopeptidase K06973 K06973; uncharacterized protein
D RsTaC01_1116 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D RsTaC01_1117 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D RsTaC01_0556 metallophosphoesterase K07099 K07099; uncharacterized protein
D RsTaC01_0441 membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein
D RsTaC01_0316 phosphatidylglycerol lysyltransferase domain-containing protein K01163 K01163; uncharacterized protein
D RsTaC01_0180 ribosomal-processing cysteine protease Prp K07584 ysxB; uncharacterized protein
D RsTaC01_0238 DUF448 domain-containing protein K07742 ylxR; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 18, 2024