+E	Messenger RNA Biogenesis	KO
#<h2><a href="/kegg/brite.html"><img src="/Fig/bget/kegg3.gif" align="middle" border=0></a>&nbsp; Messenger RNA Biogenesis - Portunus trituberculatus (swimming crab)</h2>
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A<b>Eukaryotic type</b>
B  mRNA processing factors
C    5' end processing
D      Capping factors
E        123520347 mRNA cap guanine-N7 methyltransferase-like	K00565 RNMT; mRNA (guanine-N7-)-methyltransferase [EC:2.1.1.56] 
E        123503527 mRNA-capping enzyme-like	K13917 RNGTT; mRNA-capping enzyme [EC:2.7.7.50 3.6.1.74] 
E        123520551 cyclin-dependent kinase 7-like	K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23] 
E        123510707 cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1-like	K14589 CMTR1; cap1 methyltransferase [EC:2.1.1.57] 
E        123515459 cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 2-like	K14590 CMTR2; cap2 methyltransferase [EC:2.1.1.296] 
E        123503149 putative uncharacterized protein DDB_G0281733	K18708 FAM103A1; RNMT-activating mini protein 
D      Cap binding complex
E        123501638 nuclear cap-binding protein subunit 1-like isoform X1	K12882 NCBP1; nuclear cap-binding protein subunit 1 
E        123500629 nuclear cap-binding protein subunit 2-like	K12883 NCBP2; nuclear cap-binding protein subunit 2 
C    3' end processing
D      Pre-mRNA cleavage factor Im (CFIm)
E        123515521 cleavage and polyadenylation specificity factor subunit 5-like	K14397 NUDT21; cleavage and polyadenylation specificity factor subunit 5 
E        123507339 LOW QUALITY PROTEIN: cleavage and polyadenylation specificity factor subunit 6-like	K14398 CPSF6_7; cleavage and polyadenylation specificity factor subunit 6/7 
D      Pre-mRNA cleavage factor IIm (CFIIm)
E        123505160 protein CLP1 homolog	K14399 CLP1; polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78] 
E        123512073 uncharacterized protein LOC123512073 isoform X1	K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11 
D      Cleavage and polyadenylation specificity factor (CPSF) complex
E        123510062 cleavage and polyadenylation specificity factor subunit 1-like	K14401 CPSF1; cleavage and polyadenylation specificity factor subunit 1 
E        123506663 probable cleavage and polyadenylation specificity factor subunit 2	K14402 CPSF2; cleavage and polyadenylation specificity factor subunit 2 
E        123502843 LOW QUALITY PROTEIN: cleavage and polyadenylation specificity factor subunit 3-like	K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-] 
E        123512606 cleavage and polyadenylation specificity factor subunit 4-like	K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4 
E        123515003 pre-mRNA 3'-end-processing factor FIP1-like	K14405 FIP1L1; pre-mRNA 3'-end-processing factor FIP1 
E        123516529 LOW QUALITY PROTEIN: uncharacterized protein LOC123516529	K15542 PFS2; polyadenylation factor subunit 2 
E        123502688 WD repeat-containing protein 82-like	K14962 WDR82; COMPASS component SWD2 
E        123500003 serine/threonine-protein phosphatase alpha-2 isoform-like isoform X1	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        123501052 serine/threonine-protein phosphatase alpha-2 isoform	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        123504745 serine/threonine-protein phosphatase PP1-beta catalytic subunit isoform X1	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        123516505 RNA polymerase II subunit A C-terminal domain phosphatase SSU72-like	K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16] 
D      Cleavage stimulation factor (CSTF) complex
E        123508788 cleavage stimulation factor subunit 1-like isoform X1	K14406 CSTF1; cleavage stimulation factor subunit 1 
E        123509138 LOW QUALITY PROTEIN: cleavage stimulation factor subunit 2-like	K14407 CSTF2; cleavage stimulation factor subunit 2 
E        123503294 protein suppressor of forked-like isoform X1	K14408 CSTF3; cleavage stimulation factor subunit 3 
E        123512535 uncharacterized protein LOC123512535	K06100 SYMPK; symplekin 
E        123517541 symplekin-like	K06100 SYMPK; symplekin 
D      U7-dependent histone pre-mRNA processing factors
E        123512549 small nuclear ribonucleoprotein-associated protein B-like	K11086 SNRPB; small nuclear ribonucleoprotein B and B' 
E        123503864 probable small nuclear ribonucleoprotein E	K11097 SNRPE; small nuclear ribonucleoprotein E 
E        123505051 small nuclear ribonucleoprotein F-like	K11098 SNRPF; small nuclear ribonucleoprotein F 
E        123517985 small nuclear ribonucleoprotein G-like	K11099 SNRPG; small nuclear ribonucleoprotein G 
E        123514293 U7 snRNA-associated Sm-like protein LSm10	K25591 LSM10; U7 snRNA-associated Sm-like protein LSm10 
E        123519790 U7 snRNA-associated Sm-like protein LSm11	K25592 LSM11; U7 snRNA-associated Sm-like protein LSm11 
E        123506663 probable cleavage and polyadenylation specificity factor subunit 2	K14402 CPSF2; cleavage and polyadenylation specificity factor subunit 2 
E        123502843 LOW QUALITY PROTEIN: cleavage and polyadenylation specificity factor subunit 3-like	K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-] 
E        123509138 LOW QUALITY PROTEIN: cleavage stimulation factor subunit 2-like	K14407 CSTF2; cleavage stimulation factor subunit 2 
E        123512535 uncharacterized protein LOC123512535	K06100 SYMPK; symplekin 
E        123517541 symplekin-like	K06100 SYMPK; symplekin 
D      DRB sensitivity inducing factor (DSIF) complex
E        123503766 transcription elongation factor SPT4-A-like	K15171 SUPT4H1; transcription elongation factor SPT4 
E        123517449 transcription elongation factor SPT5-like isoform X1	K15172 SUPT5H; transcription elongation factor SPT5 
D      N6-methyltransferase complex
E        123500161 N6-adenosine-methyltransferase catalytic subunit-like	K05925 METTL3; mRNA m6A methyltransferase catalytic subunit [EC:2.1.1.348] 
E        123504782 N6-adenosine-methyltransferase non-catalytic subunit-like	K23960 METTL14; mRNA m6A methyltransferase non-catalytic subunit 
E        123515520 DNA N6-methyl methyltransferase-like isoform X1	K24174 METTL4; N(6)-adenine-specific DNA methyltransferase [EC:2.1.1.72] 
E        123513720 RNA N6-adenosine-methyltransferase METTL16-like isoform X1	K11393 METTL16; U6 snRNA m6A methyltransferase [EC:2.1.1.346] 
E        123514249 pre-mRNA-splicing regulator WTAP-like	K22824 WTAP; pre-mRNA-splicing regulator WTAP 
E        123516818 LOW QUALITY PROTEIN: protein virilizer-like	K22910 VIRMA; protein virilizer 
E        123515352 LOW QUALITY PROTEIN: RNA-binding protein spenito-like	K13190 RBM15; RNA-binding protein 15 
E        123514678 trichohyalin-like isoform X1	K22909 ZC3H13; zinc finger CCCH domain-containing protein 13 
E        123498710 E3 ubiquitin-protein ligase Hakai-like isoform X1	K15685 CBLL1; E3 ubiquitin-protein ligase Hakai [EC:2.3.2.27] 
D      Poly(A) addition factors
E        123517345 poly(A) polymerase beta-like isoform X1	K14376 PAP; poly(A) polymerase [EC:2.7.7.19] 
E        123519860 uncharacterized protein LOC123519860	K14079 PAPD4; poly(A) RNA polymerase GLD2 [EC:2.7.7.19] 
E        123517534 speckle targeted PIP5K1A-regulated poly(A) polymerase-like isoform X1	K18709 TUT1; speckle targeted PIP5K1A-regulated poly(A) polymerase [EC:2.7.7.19 2.7.7.52] 
D      Negative regulators of mRNA 3' end processing
E        123502863 BRCA1-associated RING domain protein 1-like	K10683 BARD1; BRCA1-associated RING domain protein 1 
E        123513851 TAR DNA-binding protein 43-like isoform X1	K23600 TARDBP; TAR DNA-binding protein 43 
C    Other processing factors
D      123520185 DNA/RNA-binding protein KIN17-like	K13102 KIN; DNA/RNA-binding protein KIN17 
D      123512941 methyltransferase-like protein 22 isoform X1	K23040 METTL22; methyltransferase-like protein 22 [EC:2.1.1.-] 
D      123519529 terminal nucleotidyltransferase 5C-like isoform X1	K23034 TENT5C; terminal nucleotidyltransferase 5C [EC:2.7.7.19] 
D      123515906 zinc finger CCCH domain-containing protein 14-like	K23038 ZC3H14; zinc finger CCCH domain-containing protein 14 
D      123504038 serrate RNA effector molecule homolog isoform X1	K27103 SRRT; serrate RNA effector molecule 
B  mRNA surveillance and transport factors
C    Transport factors
D      EJC complex
E        123515935 RNA-binding protein 8A-like	K12876 RBM8A; RNA-binding protein 8A 
E        123513561 protein mago nashi homolog	K12877 MAGOH; protein mago nashi 
E        123503116 THO complex subunit 4-like	K12881 THOC4; THO complex subunit 4 
E        123509212 ATP-dependent RNA helicase WM6 isoform X1	K12812 DDX39B; ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7] 
E        123513715 eukaryotic initiation factor 4A-III	K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7] 
E        123511494 coiled-coil domain-containing protein 174-like isoform X1	K25178 CCDC174; coiled-coil domain-containing protein 174 
E        123518534 protein CASC3-like isoform X1	K14323 CASC3; protein CASC3 
E        123519091 histone deacetylase complex subunit SAP18-like	K14324 SAP18; histone deacetylase complex subunit SAP18 
E        123516790 pinin-like	K13114 PNN; pinin 
E        123505107 RNA-binding protein with serine-rich domain 1-A-like isoform X1	K14325 RNPS1; RNA-binding protein with serine-rich domain 1 
E        123513901 serine/arginine repetitive matrix protein 1-like isoform X1	K13171 SRRM1; serine/arginine repetitive matrix protein 1 
D      TREX complex
E        123520212 THO complex subunit 2-like isoform X1	K12879 THOC2; THO complex subunit 2 
E        123511273 THO complex subunit 3-like	K12880 THOC3; THO complex subunit 3 
E        123503116 THO complex subunit 4-like	K12881 THOC4; THO complex subunit 4 
E        123516033 THO complex subunit 5 homolog isoform X1	K13174 THOC5; THO complex subunit 5 
E        123516640 THO complex subunit 6 homolog isoform X1	K13175 THOC6; THO complex subunit 6 
E        123517351 THO complex subunit 7 homolog	K13176 THOC7; THO complex subunit 7 
E        123514590 chromatin target of PRMT1 protein-like	K28424 CHTOP; chromatin target of PRMT1 protein 
D      TREX-2 complex
E        123514272 PCI domain-containing protein 2-like isoform X1	K23801 PCID2; nuclear mRNA export protein PCID2/THP1 
E        123518539 transcription and mRNA export factor ENY2-like	K11368 ENY2; enhancer of yellow 2 transcription factor 
E        123512071 germinal-center associated nuclear protein-like	K24317 MCM3AP; germinal-center associated nuclear protein [EC:2.3.1.48] 
D      Nuclear pore complex
E        123515941 nucleoprotein TPR-like	K09291 TPR; nucleoprotein TPR 
E        123516532 protein Rae1-like	K14298 RAE1; mRNA export factor 
E        123517113 protein SEC13 homolog	K14004 SEC13; protein transport protein SEC13 
E        123508551 nucleoporin Nup37-like	K14302 NUP37; nuclear pore complex protein Nup37 
E        123506959 nuclear pore complex protein Nup85-like isoform X1	K14304 NUP85; nuclear pore complex protein Nup85 
E        123514244 nucleoporin Nup43-like	K14305 NUP43; nuclear pore complex protein Nup43 
E        123499188 nuclear pore complex protein Nup50-like	K14295 NUP50; nuclear pore complex protein Nup50 
E        123498559 nucleoporin p54-like isoform X1	K14308 NUP54; nuclear pore complex protein Nup54 
E        123506201 nuclear pore glycoprotein p62-like	K14306 NUP62; nuclear pore complex protein Nup62 
E        123516675 nucleoporin 88-like	K14318 NUP88; nuclear pore complex protein Nup88 
E        123519536 nuclear pore complex protein Nup93-like	K14309 NUP93; nuclear pore complex protein Nup93 
E        123501810 LOW QUALITY PROTEIN: nuclear pore complex protein Nup98-Nup96-like	K14297 NUP98; nuclear pore complex protein Nup98-Nup96 
E        123518884 nuclear pore complex protein Nup107-like isoform X1	K14301 NUP107; nuclear pore complex protein Nup107 
E        123513018 LOW QUALITY PROTEIN: nuclear pore complex protein Nup133-like	K14300 NUP133; nuclear pore complex protein Nup133 
E        123509366 nucleoporin NUP188-like	K14311 NUP188; nuclear pore complex protein Nup188 
E        123506113 nuclear pore complex protein Nup153-like	K14296 NUP153; nuclear pore complex protein Nup153 
E        123513821 nuclear pore complex protein Nup155-like isoform X1	K14312 NUP155; nuclear pore complex protein Nup155 
E        123511510 nuclear pore complex protein Nup160-like	K14303 NUP160; nuclear pore complex protein Nup160 
E        123501206 nucleoporin NUP35-like isoform X1	K14313 NUP35; nuclear pore complex protein Nup53 
E        123500168 nuclear pore complex protein Nup205-like	K14310 NUP205; nuclear pore complex protein Nup205 
E        123518391 nuclear pore membrane glycoprotein 210-like	K14314 NUP210; nuclear pore complex protein Nup210 
E        123507605 nuclear pore complex protein Nup214-like isoform X1	K14317 NUP214; nuclear pore complex protein Nup214 
E        123503801 nucleoporin p58/p45-like	K14307 NUPL1; nucleoporin p58/p45 
E        123503701 nucleoporin SEH1-like	K14299 SEH1; nucleoporin SEH1 
E        123509562 aladin-like	K14320 AAAS; aladin 
E        123514592 nucleoporin Gle1-like	K18723 GLE1; nucleoporin GLE1 
E        123508036 nuclear RNA export factor 1-like	K14284 NXF; nuclear RNA export factor 
E        123516152 nuclear RNA export factor 1-like	K14284 NXF; nuclear RNA export factor 
E        123501930 LOW QUALITY PROTEIN: NTF2-related export protein 2-like	K14285 NXT1_2; NTF2-related export protein 1/2 
D      Ran-mediated transport factors
E        123509074 LOW QUALITY PROTEIN: GTP-binding nuclear protein Ran-like	K07936 RAN; GTP-binding nuclear protein Ran 
E        123520171 GTP-binding nuclear protein Ran-like	K07936 RAN; GTP-binding nuclear protein Ran 
E        123520272 acidic leucine-rich nuclear phosphoprotein 32 family member A-like	K18646 ANP32A_C_D; acidic leucine-rich nuclear phosphoprotein 32 family member A/C/D 
E        123509129 ELAV-like protein 3 isoform X1	K13208 ELAVL2_3_4; ELAV like protein 2/3/4 
E        123501108 FAS-associated factor 2-like	K18726 FAF2; FAS-associated factor 2 
E        123501114 transitional endoplasmic reticulum ATPase isoform X1	K13525 VCP; transitional endoplasmic reticulum ATPase 
E        123517502 protein-lysine methyltransferase METTL21D-like	K21806 VCPKMT; protein N-lysine methyltransferase METTL21D [EC:2.1.1.-] 
E        123507156 exportin-1-like isoform X1	K14290 XPO1; exportin-1 
E        123506953 exportin-7-like isoform X1	K18460 XPO7; exportin-7 
E        123507060 exportin-7-like isoform X1	K18460 XPO7; exportin-7 
E        123506550 ran GTPase-activating protein 1-like isoform X1	K14319 RANGAP1; Ran GTPase-activating protein 1 
D      eIF4F and regulatory proteins
E        123512447 eukaryotic translation initiation factor 4E type 2-like isoform X1	K03259 EIF4E; translation initiation factor 4E 
E        123519382 eukaryotic translation initiation factor 4E-like	K03259 EIF4E; translation initiation factor 4E 
E        123512968 eukaryotic initiation factor 4A-I-like isoform X1	K03257 EIF4A; translation initiation factor 4A 
E        123507014 eukaryotic translation initiation factor 4 gamma 3-like	K03260 EIF4G; translation initiation factor 4G 
E        123516459 eukaryotic translation initiation factor 4 gamma 2-like isoform X1	K03260 EIF4G; translation initiation factor 4G 
E        123502050 uncharacterized PE-PGRS family protein PE_PGRS20-like	K03258 EIF4B; translation initiation factor 4B 
E        123505590 eukaryotic translation initiation factor 4H-like isoform X1	K24086 EIF4H; translation initiation factor 4H 
E        123510006 eukaryotic translation initiation factor 4E-binding protein 1-like	K07205 EIF4EBP1; eukaryotic translation initiation factor 4E binding protein 1 
E        123504453 uncharacterized protein LOC123504453 isoform X1	K18728 EIF4ENIF1; eukaryotic translation initiation factor 4E transporter 
E        123518197 protein angel homolog 1-like isoform X1	K18729 ANGEL; protein angel 
E        123518620 fragile X mental retardation syndrome-related protein 1-like isoform X1	K15516 FMR; fragile X mental retardation protein 
E        123509371 cytoplasmic FMR1-interacting protein-like isoform X1	K05749 CYFIP; cytoplasmic FMR1 interacting protein 
E        123502065 cytoplasmic polyadenylation element-binding protein 1-like isoform X1	K02602 CPEB; cytoplasmic polyadenylation element-binding protein 
E        123511569 cytoplasmic polyadenylation element-binding protein 2-like isoform X1	K02602 CPEB; cytoplasmic polyadenylation element-binding protein 
E        123503209 ATP-dependent RNA helicase DDX3X-like isoform X1	K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7] 
E        123509778 GRB10-interacting GYF protein 2-like isoform X1	K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein 
E        123519323 polyadenylate-binding protein 4-like	K13126 PABPC; polyadenylate-binding protein 
E        123510905 polyadenylate-binding protein-interacting protein 1-like	K14322 PAIP1; polyadenylate-binding protein-interacting protein 1 
E        123498974 helicase SKI2W-like	K12599 SKI2; antiviral helicase SKI2 [EC:5.6.2.6] 
E        123498397 deformed epidermal autoregulatory factor 1-like isoform X1	K23041 DEAF1; deformed epidermal autoregulatory factor 1 
E        123506613 malignant T-cell-amplified sequence 1-like	K07575 MCTS; malignant T-cell-amplified sequence 
E        123499578 density-regulated protein homolog	K24272 DENR; density-regulated protein 
D      APOBEC1-ACF complex
D      Other transport factors
E        123507082 partner of Y14 and mago-like	K14294 WIBG; partner of Y14 and mago 
E        123509577 heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog isoform X1	K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
E        123498654 RNA-binding protein Musashi homolog 2-like isoform X1	K14411 MSI; RNA-binding protein Musashi 
E        123509586 heterogeneous nuclear ribonucleoprotein 27C-like isoform X1	K14411 MSI; RNA-binding protein Musashi 
E        123518879 LOW QUALITY PROTEIN: RNA-binding protein Musashi homolog Rbp6-like	K14411 MSI; RNA-binding protein Musashi 
E        123506202 HBS1-like protein	K14416 HBS1; elongation factor 1 alpha-like protein 
E        123498109 protein pelota-like isoform X1	K06965 PELO; protein pelota 
E        123504650 polyadenylate-binding protein 2-like isoform X1	K14396 PABPN1; polyadenylate-binding protein 2 
E        123517504 DEAD-box helicase Dbp80-like	K18655 DDX19; ATP-dependent RNA helicase DDX19/DBP5 [EC:5.6.2.7] 
E        123513555 pre-mRNA-splicing factor syf1 homolog	K12867 SYF1; pre-mRNA-splicing factor SYF1 
E        123505811 SAP domain-containing ribonucleoprotein-like	K18732 SARNP; SAP domain-containing ribonucleoprotein 
E        123505553 regulator of chromosome condensation-like isoform X1	K11493 RCC1; regulator of chromosome condensation 
E        123505554 regulator of chromosome condensation-like isoform X1	K11493 RCC1; regulator of chromosome condensation 
E        123502020 la-related protein 6-like	K18733 LARP6; la-related protein 6 
E        123514210 la-related protein 6-like	K18733 LARP6; la-related protein 6 
E        123515231 la-related protein 6-like	K18733 LARP6; la-related protein 6 
E        123508289 WAS/WASL-interacting protein family member 3-like isoform X1	K21772 PURA; transcriptional activator protein Pur-alpha 
E        123518546 polymerase delta-interacting protein 3-like isoform X1	K22414 POLDIP3; polymerase delta-interacting protein 3 
E        123506237 zinc finger CCCH domain-containing protein 11A-like isoform X1	K22415 ZC3H11; zinc finger CCCH domain-containing protein 11 
E        123499370 leukocyte receptor cluster member 8 homolog isoform X1	K23802 LENG8; SAC3 family protein LENG8/THP3 
C    Surveillance factors
D      Surveillance complex
E        123514355 eukaryotic peptide chain release factor subunit 1	K03265 ETF1; peptide chain release factor subunit 1 
E        123520717 eukaryotic peptide chain release factor GTP-binding subunit ERF3A-like	K03267 ERF3; peptide chain release factor subunit 3 
E        123519356 regulator of nonsense transcripts 1-like isoform X1	K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3] 
E        123498510 regulator of nonsense transcripts 2-like isoform X1	K14327 UPF2; regulator of nonsense transcripts 2 
E        123518815 regulator of nonsense transcripts 3A-like	K14328 UPF3; regulator of nonsense transcripts 3 
D      Protein phosphatase 2A
E        123507499 serine/threonine-protein phosphatase 2A catalytic subunit beta isoform	K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16] 
E        123503378 serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform-like isoform X1	K03456 PPP2R1; serine/threonine-protein phosphatase 2A regulatory subunit A 
E        123519021 serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform isoform X1	K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B 
E        123517058 serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma-like	K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B'' 
E        123510610 serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform-like	K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B' 
E        123513853 serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit gamma isoform-like isoform X1	K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B' 
D      Other surveillance factors
E        123504310 serine/threonine-protein kinase SMG1-like	K08873 SMG1; serine/threonine-protein kinase SMG1 [EC:2.7.11.1] 
E        123520231 protein SMG5-like	K11125 SMG5; protein SMG5 
E        123514042 telomerase-binding protein EST1A-like	K11124 SMG6; protein SMG6 [EC:3.1.-.-] 
E        123518570 protein SMG7-like isoform X1	K14409 SMG7; protein SMG7 
E        123520497 LOW QUALITY PROTEIN: protein SMG8-like	K18734 SMG8; protein SMG8 
E        123516619 protein SMG9-like isoform X1	K18735 SMG9; protein SMG9 
E        123509778 GRB10-interacting GYF protein 2-like isoform X1	K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein 
E        123510634 titin homolog isoform X1	K19539 SECISBP2; selenocysteine insertion sequence-binding protein 2 
E        123511568 probable ATP-dependent RNA helicase DHX34	K20101 DHX34; ATP-dependent RNA helicase DHX34 [EC:5.6.2.6] 
E        123504593 GTP-binding protein 1-like isoform X1	K24887 GTPBP1; GTP-binding protein 1 
C    Factors involved in mRNA localization
D      Cargo complex
E        123514525 pumilio homolog 3-like isoform X1	K14844 PUF6; pumilio homology domain family member 6 
E        123498246 unconventional myosin-Va-like isoform X1	K10357 MYO5; myosin V 
E        123512565 LOW QUALITY PROTEIN: protein bicaudal D-like	K18739 BICD; protein bicaudal D 
E        123499357 egalitarian protein homolog	K18740 EXD1; exonuclease 3'-5' domain-containing protein 1 
E        123514393 piRNA biogenesis protein EXD1-like isoform X1	K18740 EXD1; exonuclease 3'-5' domain-containing protein 1 
D      Factors that have mRNA localization signals
E        123502968 actin-like	K05692 ACTB_G1; actin beta/gamma 1 
E        123503018 actin, muscle-like	K05692 ACTB_G1; actin beta/gamma 1 
E        123503019 actin-3, muscle-specific-like	K05692 ACTB_G1; actin beta/gamma 1 
E        123503021 actin, muscle-like	K05692 ACTB_G1; actin beta/gamma 1 
E        123503022 actin, muscle-like	K05692 ACTB_G1; actin beta/gamma 1 
E        123503024 actin, muscle-like	K05692 ACTB_G1; actin beta/gamma 1 
E        123503027 actin, muscle-like	K05692 ACTB_G1; actin beta/gamma 1 
E        123503028 actin-57B-like	K05692 ACTB_G1; actin beta/gamma 1 
E        123503029 actin-3, muscle-specific-like	K05692 ACTB_G1; actin beta/gamma 1 
E        123503030 actin, muscle-like	K05692 ACTB_G1; actin beta/gamma 1 
E        123503031 actin-1-like	K05692 ACTB_G1; actin beta/gamma 1 
E        123503184 actin, muscle-like	K05692 ACTB_G1; actin beta/gamma 1 
E        123503190 actin-3, muscle-specific-like	K05692 ACTB_G1; actin beta/gamma 1 
E        123503197 actin, muscle-type A2-like	K05692 ACTB_G1; actin beta/gamma 1 
E        123503223 actin-2, muscle-specific-like	K05692 ACTB_G1; actin beta/gamma 1 
E        123503279 actin-85C-like	K05692 ACTB_G1; actin beta/gamma 1 
E        123508003 actin, clone 302-like	K05692 ACTB_G1; actin beta/gamma 1 
E        123508011 actin, clone 403-like	K05692 ACTB_G1; actin beta/gamma 1 
E        123508014 actin, clone 403	K05692 ACTB_G1; actin beta/gamma 1 
E        123502097 uncharacterized protein DDB_G0271670-like	K04377 MYC; Myc proto-oncogene protein 
E        123507237 T-box transcription factor TBX6-like	K10180 TBX6; T-box protein 6 
E        123519666 uncharacterized protein LOC123519666	K18741 NANOS1; protein nanos 1 
E        123499512 LOW QUALITY PROTEIN: enhancer of split mbeta protein-like	K09090 HESN; hairy and enhancer of split, invertebrate 
E        123499515 enhancer of split mbeta protein-like	K09090 HESN; hairy and enhancer of split, invertebrate 
E        123499516 enhancer of split m7 protein-like	K09090 HESN; hairy and enhancer of split, invertebrate 
E        123504922 proline-rich protein 36-like	K09090 HESN; hairy and enhancer of split, invertebrate 
E        123515536 protein deadpan-like	K09090 HESN; hairy and enhancer of split, invertebrate 
D      Trans-acting binding proteins
E        123507923 far upstream element-binding protein 2-like isoform X1	K13210 FUBP; far upstream element-binding protein 
E        123501888 elongation factor 1-alpha-like	K03231 EEF1A; elongation factor 1-alpha 
E        123501914 elongation factor 1-alpha-like	K03231 EEF1A; elongation factor 1-alpha 
E        123515641 LOW QUALITY PROTEIN: elongation factor 1-gamma-like	K03233 EEF1G; elongation factor 1-gamma 
E        123506435 HCLS1-associated protein X-1-like	K16220 HAX1; HCLS1-associated protein X-1 
E        123499560 LOW QUALITY PROTEIN: arf-GAP domain and FG repeat-containing protein 1-like	K15044 AGFG1; Arf-GAP domain and FG repeats-containing protein 1 
E        123513098 maternal effect protein staufen-like isoform X1	K17597 STAU; double-stranded RNA-binding protein Staufen 
E        123518130 polypyrimidine tract-binding protein 1-like isoform X1	K13218 PTBP1; polypyrimidine tract-binding protein 1 
E        123514764 RNA-binding protein squid-like isoform X1	K03102 SQD; squid 
E        123516458 RNA-binding protein squid-like isoform X1	K03102 SQD; squid 
E        123502065 cytoplasmic polyadenylation element-binding protein 1-like isoform X1	K02602 CPEB; cytoplasmic polyadenylation element-binding protein 
E        123511569 cytoplasmic polyadenylation element-binding protein 2-like isoform X1	K02602 CPEB; cytoplasmic polyadenylation element-binding protein 
D      Other mRNA localization factors
E        123518620 fragile X mental retardation syndrome-related protein 1-like isoform X1	K15516 FMR; fragile X mental retardation protein 
E        123509371 cytoplasmic FMR1-interacting protein-like isoform X1	K05749 CYFIP; cytoplasmic FMR1 interacting protein 
E        123518605 poly(rC)-binding protein 3-like isoform X1	K21444 PCBP3_4; poly(rC)-binding protein 3/4 
E        123506958 caprin-1-like isoform X1	K18743 CAPRIN1; caprin-1 
E        123508170 uncharacterized protein LOC123508170	K09276 YBX1; Y-box-binding protein 1 
E        123511122 uncharacterized protein LOC123511122	K09276 YBX1; Y-box-binding protein 1 
E        123511123 uncharacterized protein LOC123511123	K09276 YBX1; Y-box-binding protein 1 
E        123513584 Y-box-binding protein 1-like	K09276 YBX1; Y-box-binding protein 1 
E        123516257 Y-box factor homolog isoform X1	K09276 YBX1; Y-box-binding protein 1 
E        123500178 sex-lethal homolog isoform X1	K18747 SXL; protein sex-lethal 
C    mRNA cycle factors
D      Common to processing body (P body) and stress granule
E        123501379 5'-3' exoribonuclease 1-like isoform X1	K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-] 
E        123506853 protein argonaute-2-like isoform X1	K11593 ELF2C; eukaryotic translation initiation factor 2C 
E        123514034 protein argonaute-2-like	K11593 ELF2C; eukaryotic translation initiation factor 2C 
E        123519675 protein argonaute-2-like isoform X1	K11593 ELF2C; eukaryotic translation initiation factor 2C 
E        123519838 protein argonaute-4-like isoform X1	K11593 ELF2C; eukaryotic translation initiation factor 2C 
E        123512447 eukaryotic translation initiation factor 4E type 2-like isoform X1	K03259 EIF4E; translation initiation factor 4E 
E        123519382 eukaryotic translation initiation factor 4E-like	K03259 EIF4E; translation initiation factor 4E 
E        123519356 regulator of nonsense transcripts 1-like isoform X1	K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3] 
E        123503209 ATP-dependent RNA helicase DDX3X-like isoform X1	K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7] 
E        123498165 ATP-dependent RNA helicase me31b-like	K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7] 
E        123514521 RNA-binding protein MEX3B-like	K15686 MEX3; RNA-binding protein MEX3 [EC:2.3.2.27] 
E        123511791 protein LSM14 homolog A-like isoform X1	K18749 LSM14; protein LSM14 
E        123508170 uncharacterized protein LOC123508170	K09276 YBX1; Y-box-binding protein 1 
E        123511122 uncharacterized protein LOC123511122	K09276 YBX1; Y-box-binding protein 1 
E        123511123 uncharacterized protein LOC123511123	K09276 YBX1; Y-box-binding protein 1 
E        123513584 Y-box-binding protein 1-like	K09276 YBX1; Y-box-binding protein 1 
E        123516257 Y-box factor homolog isoform X1	K09276 YBX1; Y-box-binding protein 1 
E        123507250 zyxin-like isoform X1	K16682 AJUBA; LIM domain-containing protein 
E        123498574 putative helicase mov-10-B.1 isoform X1	K18422 MOV10; helicase MOV-10 [EC:5.6.2.5] 
E        123501524 transportin-1-like isoform X1	K18752 TNPO1; transportin-1 
E        123504310 serine/threonine-protein kinase SMG1-like	K08873 SMG1; serine/threonine-protein kinase SMG1 [EC:2.7.11.1] 
E        123520231 protein SMG5-like	K11125 SMG5; protein SMG5 
E        123514042 telomerase-binding protein EST1A-like	K11124 SMG6; protein SMG6 [EC:3.1.-.-] 
E        123518570 protein SMG7-like isoform X1	K14409 SMG7; protein SMG7 
E        123503948 mRNA decay activator protein ZFP36L1-like	K18753 ZFP36L; butyrate response factor 
E        123520121 uncharacterized protein LOC123520121	K18753 ZFP36L; butyrate response factor 
E        123498858 protein lin-28 homolog	K18754 LIN28; protein lin-28 
E        123502590 huntingtin-like isoform X1	K04533 HD; huntingtin 
E        123513389 protein bicaudal C homolog 1-B-like isoform X1	K18756 BICC1; protein bicaudal C 
E        123509577 heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog isoform X1	K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
E        123507929 cAMP-dependent protein kinase catalytic subunit 1 isoform X1	K04345 PKA; protein kinase A [EC:2.7.11.11] 
E        123515633 la-related protein 1-like isoform X1	K18757 LARP1; la-related protein 1 
E        123501755 LOW QUALITY PROTEIN: ataxin-2 homolog	K23625 ATXN2_2L; ataxin 2/2L 
D      P-body specific factors
E        123503105 m7GpppN-mRNA hydrolase-like	K12613 DCP2; mRNA-decapping enzyme subunit 2 [EC:3.6.1.62] 
E        123516804 mRNA-decapping enzyme 1A-like isoform X1	K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-] 
E        123512997 U6 snRNA-associated Sm-like protein LSm1 isoform X1	K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1 
E        123506124 U6 snRNA-associated Sm-like protein LSm2	K12621 LSM2; U6 snRNA-associated Sm-like protein LSm2 
E        123511873 U6 snRNA-associated Sm-like protein LSm4 isoform X1	K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4 
E        123511004 U6 snRNA-associated Sm-like protein LSm5	K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5 
E        123500027 U6 snRNA-associated Sm-like protein LSm6	K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6 
E        123517920 U6 snRNA-associated Sm-like protein LSm7 isoform X1	K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7 
E        123509158 LOW QUALITY PROTEIN: U6 snRNA-associated Sm-like protein LSm8	K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8 
E        123504349 kinesin light chain-like isoform X1	K10407 KLC; kinesin light chain 
E        123498246 unconventional myosin-Va-like isoform X1	K10357 MYO5; myosin V 
E        123498394 tubulin alpha chain-like	K07374 TUBA; tubulin alpha 
E        123501746 tubulin alpha-1D chain	K07374 TUBA; tubulin alpha 
E        123507655 tubulin alpha chain-like	K07374 TUBA; tubulin alpha 
E        123507668 tubulin alpha chain-like	K07374 TUBA; tubulin alpha 
E        123510424 tubulin alpha-1C chain-like	K07374 TUBA; tubulin alpha 
E        123510926 tubulin alpha-1C chain-like isoform X1	K07374 TUBA; tubulin alpha 
E        123512335 tubulin alpha-1 chain-like	K07374 TUBA; tubulin alpha 
E        123512596 tubulin alpha-8 chain-like	K07374 TUBA; tubulin alpha 
E        123515185 tubulin alpha-4 chain-like	K07374 TUBA; tubulin alpha 
E        123515718 tubulin alpha-1 chain-like	K07374 TUBA; tubulin alpha 
E        123516567 tubulin alpha-1A chain	K07374 TUBA; tubulin alpha 
E        123517578 tubulin alpha-1 chain-like	K07374 TUBA; tubulin alpha 
E        123519861 tubulin alpha-3 chain-like	K07374 TUBA; tubulin alpha 
E        123519862 tubulin alpha-3 chain	K07374 TUBA; tubulin alpha 
E        123519988 tubulin alpha-1 chain	K07374 TUBA; tubulin alpha 
E        123519990 tubulin alpha-2 chain-like	K07374 TUBA; tubulin alpha 
E        123502065 cytoplasmic polyadenylation element-binding protein 1-like isoform X1	K02602 CPEB; cytoplasmic polyadenylation element-binding protein 
E        123511569 cytoplasmic polyadenylation element-binding protein 2-like isoform X1	K02602 CPEB; cytoplasmic polyadenylation element-binding protein 
E        123509165 LOW QUALITY PROTEIN: protein Gawky-like	K18412 TNRC6; trinucleotide repeat-containing gene 6 protein 
E        123498395 CCR4-NOT transcription complex subunit 1-like isoform X1	K12604 CNOT1; CCR4-NOT transcription complex subunit 1 
E        123517568 CCR4-NOT transcription complex subunit 2-like isoform X1	K12605 CNOT2; CCR4-NOT transcription complex subunit 2 
E        123517706 CCR4-NOT transcription complex subunit 3-like isoform X1	K12580 CNOT3; CCR4-NOT transcription complex subunit 3 
E        123506064 LOW QUALITY PROTEIN: alpha-protein kinase 1-like	K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27] 
E        123515508 uncharacterized protein LOC123515508 isoform X1	K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4] 
E        123507138 CCR4-NOT transcription complex subunit 7-like	K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 
E        123509073 DIS3-like exonuclease 2 isoform X1	K18758 DIS3L2; DIS3-like exonuclease 2 [EC:3.1.13.-] 
E        123518171 PAN2-PAN3 deadenylation complex catalytic subunit PAN2-like	K12571 PAN2; PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:3.1.13.4] 
E        123506839 PAN2-PAN3 deadenylation complex subunit pan3-like isoform X1	K12572 PAN3; PAB-dependent poly(A)-specific ribonuclease subunit 3 
E        123498912 protein Tob1-like	K14443 TOB; protein Tob/BTG 
E        123511535 protein Tob2-like	K14443 TOB; protein Tob/BTG 
E        123520784 protein BTG3-like	K14443 TOB; protein Tob/BTG 
E        123504453 uncharacterized protein LOC123504453 isoform X1	K18728 EIF4ENIF1; eukaryotic translation initiation factor 4E transporter 
E        123499685 protein PAT1 homolog 1-like	K12617 PATL1; DNA topoisomerase 2-associated protein PAT1 
E        123502589 enhancer of mRNA-decapping protein 3-like	K12615 EDC3; enhancer of mRNA-decapping protein 3 
E        123509631 enhancer of mRNA-decapping protein 4-like isoform X1	K12616 EDC4; enhancer of mRNA-decapping protein 4 
E        123502732 nanos homolog 1-like	K18760 NANOS2; protein nanos 2 
E        123498510 regulator of nonsense transcripts 2-like isoform X1	K14327 UPF2; regulator of nonsense transcripts 2 
E        123518815 regulator of nonsense transcripts 3A-like	K14328 UPF3; regulator of nonsense transcripts 3 
E        123500999 E3 ubiquitin-protein ligase TRIM71-like	K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27] 
E        123512213 DNA-directed RNA polymerase II subunit RPB7	K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7 
E        123505904 YTH domain-containing family protein 3-like isoform X1	K20102 YTHDF; YTH domain-containing family protein 
D      Stress granule specific factors
E        123498799 LOW QUALITY PROTEIN: nucleolysin TIAR-like	K13201 TIA1; nucleolysin TIA-1/TIAR 
E        123505619 nucleolysin TIAR-like isoform X1	K13201 TIA1; nucleolysin TIA-1/TIAR 
E        123519323 polyadenylate-binding protein 4-like	K13126 PABPC; polyadenylate-binding protein 
E        123513098 maternal effect protein staufen-like isoform X1	K17597 STAU; double-stranded RNA-binding protein Staufen 
E        123518620 fragile X mental retardation syndrome-related protein 1-like isoform X1	K15516 FMR; fragile X mental retardation protein 
E        123517963 LOW QUALITY PROTEIN: ras GTPase-activating protein-binding protein 2-like	K24983 G3BP2; Ras GTPase-activating protein-binding protein 2 
E        123520013 eukaryotic translation initiation factor 2A-like	K15026 EIF2A; translation initiation factor 2A 
E        123505083 eukaryotic translation initiation factor 3 subunit B-like	K03253 EIF3B; translation initiation factor 3 subunit B 
E        123512968 eukaryotic initiation factor 4A-I-like isoform X1	K03257 EIF4A; translation initiation factor 4A 
E        123513715 eukaryotic initiation factor 4A-III	K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7] 
E        123502050 uncharacterized PE-PGRS family protein PE_PGRS20-like	K03258 EIF4B; translation initiation factor 4B 
E        123507014 eukaryotic translation initiation factor 4 gamma 3-like	K03260 EIF4G; translation initiation factor 4G 
E        123516459 eukaryotic translation initiation factor 4 gamma 2-like isoform X1	K03260 EIF4G; translation initiation factor 4G 
E        123512206 ribosomal protein S6 kinase alpha-2-like isoform X1	K04373 RPS6KA; ribosomal protein S6 kinase alpha-1/2/3/6 [EC:2.7.11.1] 
E        123502814 guanine nucleotide-binding protein subunit beta-like protein	K14753 RACK1; guanine nucleotide-binding protein subunit beta-2-like 1 protein 
E        123508036 nuclear RNA export factor 1-like	K14284 NXF; nuclear RNA export factor 
E        123516152 nuclear RNA export factor 1-like	K14284 NXF; nuclear RNA export factor 
E        123520179 histone deacetylase 6-like isoform X1	K11407 HDAC6; histone deacetylase 6 [EC:3.5.1.98] 
E        123498682 tudor domain-containing protein 3-like isoform X1	K18404 TDRD3; tudor domain-containing protein 3 
B  mRNA degradation factors
C    5'-3' decay
D      Decapping complex
E        123516804 mRNA-decapping enzyme 1A-like isoform X1	K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-] 
E        123503105 m7GpppN-mRNA hydrolase-like	K12613 DCP2; mRNA-decapping enzyme subunit 2 [EC:3.6.1.62] 
E        123498165 ATP-dependent RNA helicase me31b-like	K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7] 
E        123502589 enhancer of mRNA-decapping protein 3-like	K12615 EDC3; enhancer of mRNA-decapping protein 3 
E        123509631 enhancer of mRNA-decapping protein 4-like isoform X1	K12616 EDC4; enhancer of mRNA-decapping protein 4 
E        123499685 protein PAT1 homolog 1-like	K12617 PATL1; DNA topoisomerase 2-associated protein PAT1 
D      Lsm complex
E        123512997 U6 snRNA-associated Sm-like protein LSm1 isoform X1	K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1 
E        123506124 U6 snRNA-associated Sm-like protein LSm2	K12621 LSM2; U6 snRNA-associated Sm-like protein LSm2 
E        123511873 U6 snRNA-associated Sm-like protein LSm4 isoform X1	K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4 
E        123511004 U6 snRNA-associated Sm-like protein LSm5	K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5 
E        123500027 U6 snRNA-associated Sm-like protein LSm6	K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6 
E        123517920 U6 snRNA-associated Sm-like protein LSm7 isoform X1	K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7 
E        123509158 LOW QUALITY PROTEIN: U6 snRNA-associated Sm-like protein LSm8	K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8 
D      5' exonucleases
E        123501379 5'-3' exoribonuclease 1-like isoform X1	K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-] 
E        123511245 5'-3' exoribonuclease 2 homolog isoform X1	K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-] 
E        123512954 U8 snoRNA-decapping enzyme-like	K16855 NUDT16; U8 snoRNA-decapping enzyme [EC:3.6.1.62 3.6.1.64] 
E        123513332 U8 snoRNA-decapping enzyme-like	K16855 NUDT16; U8 snoRNA-decapping enzyme [EC:3.6.1.62 3.6.1.64] 
D      Other 5'-3' decay factors
E        123511551 m7GpppX diphosphatase-like	K12584 DCPS; m7GpppX diphosphatase [EC:3.6.1.59] 
E        123507837 probable helicase with zinc finger domain isoform X1	K25168 HELZ; helicase with zinc finger domain [EC:5.6.2.-] 
C    3'-5' decay
D      Core exosome factors
E        123499466 exosome complex component CSL4-like	K07573 CSL4; exosome complex component CSL4 
E        123518253 exosome complex component RRP4-like isoform X1	K03679 RRP4; exosome complex component RRP4 
E        123499167 exosome complex component RRP40-like isoform X1	K03681 RRP40; exosome complex component RRP40 
E        123499356 exosome complex component RRP40-like	K03681 RRP40; exosome complex component RRP40 
E        123500065 exosome complex component RRP41 homolog	K11600 RRP41; exosome complex component RRP41 
E        123509886 exosome complex component RRP46-like	K12590 RRP46; exosome complex component RRP46 
E        123499064 exosome complex component MTR3-like	K12587 MTR3; exosome complex component MTR3 
E        123507159 exosome complex component RRP42-like isoform X1	K12589 RRP42; exosome complex component RRP42 
E        123509601 exosome complex component RRP43-like	K12586 RRP43; exosome complex component RRP43 
E        123518664 exosome complex component RRP45A-like isoform X1	K03678 RRP45; exosome complex component RRP45 
D      Exosome cofactors
E        123505820 exosome complex exonuclease RRP44-like	K12585 DIS3; exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-] 
E        123507118 exosome component 10-like isoform X1	K12591 RRP6; exosome complex exonuclease RRP6 [EC:3.1.13.-] 
E        123505105 nuclear nucleic acid-binding protein C1D-like	K12592 C1D; exosome complex protein LRP1 
E        123512079 single-stranded DNA-binding protein-like	K12593 MPHOSPH6; M-phase phosphoprotein 6, animal type 
D      TRAMP complex
E        123520150 terminal nucleotidyltransferase 4B-like isoform X1	K03514 PAPD5_7; non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19] 
E        123515917 exosome RNA helicase MTR4-like	K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6] 
D      Ski complex
E        123498974 helicase SKI2W-like	K12599 SKI2; antiviral helicase SKI2 [EC:5.6.2.6] 
E        123509797 LOW QUALITY PROTEIN: tetratricopeptide repeat protein 37-like	K12600 SKI3; superkiller protein 3 
E        123506384 WD repeat-containing protein 61-like	K12602 WDR61; WD repeat-containing protein 61 
D      Ccr4-NOT complex
E        123515508 uncharacterized protein LOC123515508 isoform X1	K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4] 
E        123498395 CCR4-NOT transcription complex subunit 1-like isoform X1	K12604 CNOT1; CCR4-NOT transcription complex subunit 1 
E        123517568 CCR4-NOT transcription complex subunit 2-like isoform X1	K12605 CNOT2; CCR4-NOT transcription complex subunit 2 
E        123517706 CCR4-NOT transcription complex subunit 3-like isoform X1	K12580 CNOT3; CCR4-NOT transcription complex subunit 3 
E        123506064 LOW QUALITY PROTEIN: alpha-protein kinase 1-like	K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27] 
E        123507138 CCR4-NOT transcription complex subunit 7-like	K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 
E        123513635 LOW QUALITY PROTEIN: CCR4-NOT transcription complex subunit 9-like	K12606 RCD1; CCR4-NOT transcription complex subunit 9 
E        123506129 CCR4-NOT transcription complex subunit 10-A-like	K12607 CNOT10; CCR4-NOT transcription complex subunit 10 
D      Pan complex
E        123518171 PAN2-PAN3 deadenylation complex catalytic subunit PAN2-like	K12571 PAN2; PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:3.1.13.4] 
E        123506839 PAN2-PAN3 deadenylation complex subunit pan3-like isoform X1	K12572 PAN3; PAB-dependent poly(A)-specific ribonuclease subunit 3 
D      Other 3'-5' decay factors
E        123506386 poly(A)-specific ribonuclease PARN-like isoform X1	K01148 PARN; poly(A)-specific ribonuclease [EC:3.1.13.4] 
E        123510907 LOW QUALITY PROTEIN: pre-piRNA 3'-exonuclease trimmer-like	K01148 PARN; poly(A)-specific ribonuclease [EC:3.1.13.4] 
E        123504545 LOW QUALITY PROTEIN: ATP-dependent DNA/RNA helicase DHX36-like	K14442 DHX36; ATP-dependent RNA helicase DHX36 [EC:5.6.2.6] 
E        123498912 protein Tob1-like	K14443 TOB; protein Tob/BTG 
E        123511535 protein Tob2-like	K14443 TOB; protein Tob/BTG 
E        123520784 protein BTG3-like	K14443 TOB; protein Tob/BTG 
E        123509330 nocturnin-like isoform X1	K18764 NOCT; nocturnin [EC:3.1.3.108] 
E        123505049 3'-5' exoribonuclease 1-like	K18416 THEX1; 3'-5' exoribonuclease 1 [EC:3.1.-.-] 
E        123511551 m7GpppX diphosphatase-like	K12584 DCPS; m7GpppX diphosphatase [EC:3.6.1.59] 
E        123510876 2',5'-phosphodiesterase 12-like isoform X1	K19612 PDE12; 2',5'-phosphodiesterase [EC:3.1.13.4 3.1.4.-] 
E        123507837 probable helicase with zinc finger domain isoform X1	K25168 HELZ; helicase with zinc finger domain [EC:5.6.2.-] 
E        123502997 nuclear exosome regulator NRDE2-like	K26109 NRDE2; nuclear exosome regulator NRDE2 
E        123508941 protein Smaug homolog 1-like isoform X1	K27396 SMG; protein Smaug 
E        123501750 focadhesin-like	K27498 FOCAD; focadhesin 
C    Other degradation factors
D      RNases
E        123505208 probable ribonuclease ZC3H12C	K18668 ZC3H12; ribonuclease ZC3H12 [EC:3.1.-.-] 
#
A<b>Prokaryotic type</b>
B  Bacterial mRNA degradation factors
C    RNA degradosome components
D      Ribonucreases
E        123513636 LOW QUALITY PROTEIN: ribonuclease 3-like	K03685 rnc; ribonuclease III [EC:3.1.26.3] 
E        123520498 oligoribonuclease, mitochondrial-like	K13288 orn; oligoribonuclease [EC:3.1.-.-] 
E        123520819 oligoribonuclease, mitochondrial-like	K13288 orn; oligoribonuclease [EC:3.1.-.-] 
D      Helicases
D      Other RNA degradosome components
E        123520219 enolase isoform X1	K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] 
E        123512616 polyribonucleotide nucleotidyltransferase 1, mitochondrial-like	K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] 
E        123504927 ATP-dependent 6-phosphofructokinase-like isoform X1	K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] 
C    Other RNA degradation factors
D      Chaperones
E        123519556 stress-70 protein, mitochondrial-like	K04043 dnaK; molecular chaperone DnaK 
D      Others
D      Bacterial Small RNA Regulators
B  Archeal mRNA degradation factors
C    Exosome components
D      Core exosome
E        123518253 exosome complex component RRP4-like isoform X1	K03679 RRP4; exosome complex component RRP4 
E        123499466 exosome complex component CSL4-like	K07573 CSL4; exosome complex component CSL4 
D      Cofactors
E        123500065 exosome complex component RRP41 homolog	K11600 RRP41; exosome complex component RRP41 
E        123507159 exosome complex component RRP42-like isoform X1	K12589 RRP42; exosome complex component RRP42 
D      Others
!
#<hr>
#[ <a href="/kegg/brite.html">BRITE</a> | <a href="/kegg/kegg2.html">KEGG2</a> | <a href="/kegg/">KEGG</a> ]<br>
#Last updated: August 27, 2025