+D GENES KO #

  KEGG Orthology (KO) - Pantoea vagans C9-1

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:pva00010] D Pvag_2179 glk; Glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D Pvag_3498 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Pvag_1290 pfka1; putative 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Pvag_3162 pfka3; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Pvag_2760 fbp; fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D Pvag_3153 glpX; Fructose-1,6-bisphosphatase class II glpX K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D Pvag_1293 fbaA; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Pvag_2544 fba; fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Pvag_3765 cbbA; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Pvag_3159 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D Pvag_1552 gapA; glyceraldehyde-3-phosphate dehydrogenase A K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Pvag_2545 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D Pvag_0576 gpma1; Phosphoglycerate mutase 1 K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D Pvag_0972 gpma3; Phosphoglycerate mutase 1 K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D Pvag_0057 gpmB; phosphoglyceromutase 2 K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D Pvag_0973 eno1; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Pvag_2458 eno3; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Pvag_1162 pykF; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Pvag_1657 pykA; pyruvate kinase II K00873 PK; pyruvate kinase [EC:2.7.1.40] D Pvag_1150 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D Pvag_0147 aceE; pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D Pvag_0148 aceF; pyruvate dehydrogenase (dihydrolipoyltransacetylase component) K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D Pvag_0149 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Pvag_2032 adhc1; alcohol dehydrogenase class III K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D Pvag_1532 adhE; putative alcohol / acetaldehyde dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D Pvag_1623 adhP; alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D Pvag_pPag10027 yjgB; Alcohol dehydrogenase K12957 ahr; alcohol/geraniol dehydrogenase (NADP+) [EC:1.1.1.2 1.1.1.183] D Pvag_3528 adhc3; putative zinc-binding alcohol dehydrogenase family protein K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D Pvag_pPag30429 yahK; alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D Pvag_1888 aldH; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Pvag_1020 aldB; aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-] D Pvag_3549 acs; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Pvag_0577 galM; galactose-1-epimerase (mutarotase) K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D Pvag_0795 agp; glucose-1-phosphatase K01085 agp; glucose-1-phosphatase [EC:3.1.3.10] D Pvag_3221 yihX; Acyl-CoA dehydrogenase family member 10 (ACAD-10) K20866 yihX; glucose-1-phosphatase [EC:3.1.3.10] D Pvag_0529 pgm; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Pvag_1553 yeaD; UPF0010 protein yeaD K01792 E5.1.3.15; glucose-6-phosphate 1-epimerase [EC:5.1.3.15] D Pvag_2949 pckA; phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D Pvag_2525 bglA; 6-phospho-beta-glucosidase A K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D Pvag_pPag30318 bglB; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D Pvag_pPag30437 ascB; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D Pvag_2205 crr; PTS system, glucose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D Pvag_0902 ptsG; PTS system, glucose-specific IIBC component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199] D Pvag_1476 malX; PTS system, maltose and glucose-specific II ABC K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D Pvag_pPag30436 ascF; PTS system, beta-glucoside-specific IIABC component K02753 ascF; beta-glucoside (arbutin/salicin/cellobiose) PTS system EIICB component [EC:2.7.1.-] D Pvag_3561 Gluconate 2-dehydrogenase cytochrome c subunit precursor K06150 E1.1.99.3; gluconate 2-dehydrogenase (acceptor) , cytochrome c subunit [EC:1.1.99.3] C 00020 Citrate cycle (TCA cycle) [PATH:pva00020] D Pvag_0543 gltA; Citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D Pvag_1492 acnA; aconitate hydratase K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D Pvag_0154 acnB; aconitate hydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D Pvag_0940 icdA; isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D Pvag_0548 sucA; 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D Pvag_0549 sucB; 2-oxoglutarate dehydrogenase (dihydrolipoyltranssuccinase E2 component) K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D Pvag_0149 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Pvag_0551 sucD; Succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D Pvag_0550 sucC; Succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D Pvag_0546 sdhA; succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D Pvag_0547 sdhB; succinate dehydrogenase, iron sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D Pvag_0544 sdhC; succinate dehydrogenase cytochrome b-556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D Pvag_0545 sdhD; succinate dehydrogenase, hydrophobic subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit D Pvag_pPag30228 fumB; fumarase B K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D Pvag_1259 fumC; fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D Pvag_2806 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D Pvag_3095 mqo; malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4] D Pvag_pPag30235 mqo; malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4] D Pvag_2949 pckA; phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D Pvag_0147 aceE; pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D Pvag_0148 aceF; pyruvate dehydrogenase (dihydrolipoyltransacetylase component) K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] C 00030 Pentose phosphate pathway [PATH:pva00030] D Pvag_3498 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Pvag_1655 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D Pvag_0586 ybhE; putative isomerase K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31] D Pvag_1824 hypothetical protein K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31] D Pvag_1962 gnd; 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D Pvag_2934 rpe; D-ribulose-5-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D Pvag_1004 tktB; putative N-terminal region of transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Pvag_1005 tkt1; C-terminal region of transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Pvag_2219 tktA; Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Pvag_2548 tkt3; Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Pvag_pPag30527 transketolase-like protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Pvag_pPag30528 putative transketolase beta subunit protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Pvag_0067 talB; transaldolase B K00616 TALDO1; transaldolase [EC:2.2.1.2] D Pvag_2218 talA; transaldolase A K00616 TALDO1; transaldolase [EC:2.2.1.2] D Pvag_2539 rpiA; ribosephosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D Pvag_3096 ptk; putative phosphoketolase K01621 xfp; xylulose-5-phosphate/fructose-6-phosphate phosphoketolase [EC:4.1.2.9 4.1.2.22] D Pvag_2604 deoC; 2-deoxyribose-5-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4] D Pvag_3240 rbsk3; ribokinase, rbsK K00852 rbsK; ribokinase [EC:2.7.1.15] D Pvag_3732 rbsk5; putative ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15] D Pvag_0043 rbsk1; putative carbohydrate kinase K28747 deoK; deoxyribokinase [EC:2.7.1.229] D Pvag_2602 deoB; Phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7] D Pvag_0529 pgm; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Pvag_1844 phnN; phosphonate metabolism protein phnN K05774 phnN; ribose 1,5-bisphosphokinase [EC:2.7.4.23] D Pvag_1070 prsA; Phosphoribosylpyrophosphate synthetase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D Pvag_1654 eda; 2-keto-3-deoxygluconate 6-phosphate aldolase and 2-keto-4-hydroxyglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D Pvag_pPag30134 short chain dehydrogenase K00034 gdh; glucose 1-dehydrogenase [EC:1.1.1.47] D Pvag_1328 gcd1; Glucose dehydrogenase K00117 gcd; quinoprotein glucose dehydrogenase [EC:1.1.5.2] D Pvag_3575 gcd3; Glucose dehydrogenase K00117 gcd; quinoprotein glucose dehydrogenase [EC:1.1.5.2] D Pvag_pPag30408 hypothetical protein K01053 gnl; gluconolactonase [EC:3.1.1.17] D Pvag_3560 gluconate dehydrogenase complex, dehydrogenase subunit precursor K06151 E1.1.99.3A; gluconate 2-dehydrogenase alpha chain [EC:1.1.99.3] D Pvag_3738 glucose-methanol-choline oxidoreductase K06151 E1.1.99.3A; gluconate 2-dehydrogenase alpha chain [EC:1.1.99.3] D Pvag_3559 Gluconate 2-dehydrogenase subunit 3 precursor K06152 E1.1.99.3G; gluconate 2-dehydrogenase gamma chain [EC:1.1.99.3] D Pvag_3737 hypothetical protein K06152 E1.1.99.3G; gluconate 2-dehydrogenase gamma chain [EC:1.1.99.3] D Pvag_3561 Gluconate 2-dehydrogenase cytochrome c subunit precursor K06150 E1.1.99.3; gluconate 2-dehydrogenase (acceptor) , cytochrome c subunit [EC:1.1.99.3] D Pvag_3292 yiaE; 2-ketogluconate reductase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215] D Pvag_2989 gntK; putative gluconokinase K00851 idnK; gluconokinase [EC:2.7.1.12] D Pvag_3290 kdgk1; 2-dehydro-3-deoxygluconokinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45] D Pvag_3373 kdgk3; ketodeoxygluconokinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45] D Pvag_pPag30034 hfr; putative hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D Pvag_1293 fbaA; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Pvag_2544 fba; fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Pvag_3765 cbbA; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Pvag_2760 fbp; fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D Pvag_3153 glpX; Fructose-1,6-bisphosphatase class II glpX K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D Pvag_1290 pfka1; putative 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Pvag_3162 pfka3; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] C 00040 Pentose and glucuronate interconversions [PATH:pva00040] D Pvag_1310 kdgF; Pectin degradation protein kdgF K26933 kdgF; unsaturated pyranuronate lyase [EC:4.2.99.25] D Pvag_1129 kduI; 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase K01815 kduI; 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [EC:5.3.1.17] D Pvag_1128 kduD; 2-deoxy-D-gluconate 3-dehydrogenase K00065 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase [EC:1.1.1.127] D Pvag_2727 uxaC; uronate isomerase K01812 uxaC; glucuronate isomerase [EC:5.3.1.12] D Pvag_2726 uxaB; altronate oxidoreductase K00041 uxaB; tagaturonate reductase [EC:1.1.1.58] D Pvag_2725 uxaA; altronate hydrolase K01685 uxaA; altronate hydrolase [EC:4.2.1.7] D Pvag_3033 uxuA; mannonate dehydratase K01686 uxuA; mannonate dehydratase [EC:4.2.1.8] D Pvag_2004 rspA; Starvation sensing protein rspA K08323 rspA; mannonate dehydratase [EC:4.2.1.8] D Pvag_2007 ydfI; putative oxidoreductase K00040 uxuB; fructuronate reductase [EC:1.1.1.57] D Pvag_2005 rspB; putative starvation sensing zinc-binding dehydrogenase K08322 rspB; L-gulonate 5-dehydrogenase [EC:1.1.1.380] D Pvag_1536 ugd; putative nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D Pvag_1537 galU; glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Pvag_1973 galF; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Pvag_1484 araD; L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4] D Pvag_2934 rpe; D-ribulose-5-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D Pvag_1249 araA; L-arabinose isomerase K01804 araA; L-arabinose isomerase [EC:5.3.1.4] D Pvag_1250 araB; L-ribulokinase K00853 araB; L-ribulokinase [EC:2.7.1.16] D Pvag_3273 xylB; xylulokinase K00854 xylB; xylulokinase [EC:2.7.1.17] D Pvag_3274 xylA; D-xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5] D Pvag_1396 rhaB; rhamnulokinase K00848 rhaB; rhamnulokinase [EC:2.7.1.5] D Pvag_1394 rhaD; rhamnulose-1-phosphate aldolase K01629 rhaD; rhamnulose-1-phosphate aldolase [EC:4.1.2.19] D Pvag_1834 hypothetical protein K09988 lyxA; D-lyxose ketol-isomerase [EC:5.3.1.15] D Pvag_2407 yagE; dihydrodipicolinate synthase K22397 yjhH; 2-dehydro-3-deoxy-D-pentonate aldolase [EC:4.1.2.28] C 00051 Fructose and mannose metabolism [PATH:pva00051] D Pvag_0326 yajF; Probable manno(fructo)kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D Pvag_pPag10156 rbsK; putative carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D Pvag_1258 manA; mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D Pvag_1395 rhaA; L-rhamnose isomerase K01813 rhaA; L-rhamnose isomerase [EC:5.3.1.14] D Pvag_1396 rhaB; rhamnulokinase K00848 rhaB; rhamnulokinase [EC:2.7.1.5] D Pvag_1394 rhaD; rhamnulose-1-phosphate aldolase K01629 rhaD; rhamnulose-1-phosphate aldolase [EC:4.1.2.19] D Pvag_1804 yedP; mannosyl-3-phosphoglycerate phosphatase K07026 E3.1.3.70; mannosyl-3-phosphoglycerate phosphatase [EC:3.1.3.70] D Pvag_1290 pfka1; putative 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Pvag_3162 pfka3; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Pvag_2760 fbp; fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D Pvag_3153 glpX; Fructose-1,6-bisphosphatase class II glpX K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D Pvag_3336 mtlD; mannitol-1-phosphate dehydrogenase K00009 mtlD; mannitol-1-phosphate 5-dehydrogenase [EC:1.1.1.17] D Pvag_pPag20075 srlD1; sorbitol-6-phosphate dehydrogenase K00068 srlD; sorbitol-6-phosphate 2-dehydrogenase [EC:1.1.1.140] D Pvag_pPag20100 srlD3; sorbitol-6-phosphate dehydrogenase K00068 srlD; sorbitol-6-phosphate 2-dehydrogenase [EC:1.1.1.140] D Pvag_2042 fruK; fructose-1-phosphate kinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] D Pvag_3274 xylA; D-xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5] D Pvag_1293 fbaA; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Pvag_2544 fba; fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Pvag_3765 cbbA; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Pvag_3159 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D Pvag_3767 ptxa3; PTS system, IIA component K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202] D Pvag_2041 fruA; PTS system, fructose-specific IIBC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D Pvag_3766 ptxBC; PTS system, IIBC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D Pvag_1592 manX; PTS system, mannose-specific IIAB component K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191] D Pvag_1593 manY; Mannose permease IIC component K02795 manY; mannose PTS system EIIC component D Pvag_1594 manZ; Mannose permease IID component K02796 manZ; mannose PTS system EIID component D Pvag_3337 mtlA; PTS system, mannitol-specific IIABC component K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197] D Pvag_2110 yfbT; Phosphatase yfbT K19270 hxpA; mannitol-1-/sugar-/sorbitol-6-phosphatase [EC:3.1.3.22 3.1.3.23 3.1.3.50] D Pvag_1130 yniC; Phosphoglycolate phosphatase K24204 hxpB; mannitol-1-/sugar-/sorbitol-6-/2-deoxyglucose-6-phosphatase [EC:3.1.3.22 3.1.3.23 3.1.3.50 3.1.3.68] D Pvag_pPag20074 srlB1; Glucitol/sorbitol-specific phosphotransferase enzyme IIA component K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198] D Pvag_pPag20101 srlB3; Glucitol/sorbitol-specific phosphotransferase enzyme IIA component K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198] D Pvag_pPag20073 srlE1; PTS system, glucitol/sorbitol-specific IIBC component K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198] D Pvag_pPag20102 srlE3; PTS system, glucitol/sorbitol-specific IIBC component K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198] D Pvag_pPag20072 srlA1; PTS system, glucitol/sorbitol-specific IIC component 2 K02783 srlA; glucitol/sorbitol PTS system EIIC component D Pvag_pPag20103 srlA3; PTS system, glucitol/sorbitol-specific IIC component 2 K02783 srlA; glucitol/sorbitol PTS system EIIC component C 00052 Galactose metabolism [PATH:pva00052] D Pvag_0577 galM; galactose-1-epimerase (mutarotase) K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D Pvag_0578 galK; Galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D Pvag_0579 galT; Galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] D Pvag_1972 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Pvag_1537 galU; glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Pvag_1973 galF; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Pvag_0529 pgm; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Pvag_2179 glk; Glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D Pvag_0310 lacZ; beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D Pvag_pPag30115 ganB; Putative 1,4-beta-exogalactanase ganB K12308 bgaB; beta-galactosidase [EC:3.2.1.23] D Pvag_1249 araA; L-arabinose isomerase K01804 araA; L-arabinose isomerase [EC:5.3.1.4] D Pvag_1290 pfka1; putative 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Pvag_3162 pfka3; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Pvag_pPag10153 scrB; sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26] D Pvag_2614 putative alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] C 00053 Ascorbate and aldarate metabolism [PATH:pva00053] D Pvag_1536 ugd; putative nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D Pvag_pPag30408 hypothetical protein K01053 gnl; gluconolactonase [EC:3.1.1.17] D Pvag_1535 wcfX; putative nucleotide-diphosphate sugar epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D Pvag_3084 yjjN; putative zinc-binding dehydrogenase K23007 lgoD; L-galactonate 5-dehydrogenase [EC:1.1.1.414] D Pvag_1295 ptxa1; PTS system, IIA component K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194] D Pvag_pPag30336 ptxA; putative PEP-dependent phosphotransferase system component II A K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194] D Pvag_1291 ptxB; putative sugar phosphotransferase component IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194] D Pvag_pPag30337 ptxB; putative PEP-dependent phosphotransferase system component IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194] D Pvag_1292 ptxc1; PTS permease IIC component K03475 ulaA; ascorbate PTS system EIIC component D Pvag_pPag30338 ptxC; Putative PEP-dependent phosphotransferase system IIC component K03475 ulaA; ascorbate PTS system EIIC component D Pvag_1484 araD; L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4] D Pvag_1888 aldH; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Pvag_2467 ygcX; D-glucarate dehydratase K01706 gudD; glucarate dehydratase [EC:4.2.1.40] D Pvag_2466 yhaF; 2-dehydro-3-deoxyglucarate aldolase K01630 garL; 2-dehydro-3-deoxyglucarate aldolase [EC:4.1.2.20] D Pvag_2470 yhaG; D-galactarate dehydratase K01708 garD; galactarate dehydratase [EC:4.2.1.42] D Pvag_pPag30246 hypothetical protein K18981 udh; uronate dehydrogenase [EC:1.1.1.203] C 00500 Starch and sucrose metabolism [PATH:pva00500] D Pvag_pPag10154 scrA; PTS system, sucrose-specific IIBC component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211] D Pvag_pPag10153 scrB; sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26] D Pvag_2614 putative alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D Pvag_1537 galU; glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Pvag_1973 galF; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Pvag_0622 bglX; beta-D-glucoside glucohydrolase, periplasmic K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Pvag_3354 bcsA; cellulose synthase catalytic subunit K00694 bcsA; cellulose synthase (UDP-forming) [EC:2.4.1.12] D Pvag_3364 yhjO; cellulose synthase (UDP-forming) K00694 bcsA; cellulose synthase (UDP-forming) [EC:2.4.1.12] D Pvag_2525 bglA; 6-phospho-beta-glucosidase A K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D Pvag_pPag30318 bglB; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D Pvag_pPag30437 ascB; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D Pvag_2979 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D Pvag_2978 glgA; Glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21] D Pvag_2981 glgB; 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D Pvag_2962 malP; Carbohydrate phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D Pvag_2977 glgP; glycogen phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D Pvag_pPag30214 malP; maltodextrin phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D Pvag_2980 glgx3; glycogen operon protein GlgX K02438 glgX; glycogen debranching enzyme [EC:3.2.1.196] D Pvag_1764 amyA; cytoplasmic alpha-amylase K01176 AMY; alpha-amylase [EC:3.2.1.1] D Pvag_2961 malQ; Glycoside hydrolase, family 77 K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25] D Pvag_pPag30213 malQ; 4-alpha-glucanotransferase (amylomaltase) K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25] D Pvag_2205 crr; PTS system, glucose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D Pvag_1476 malX; PTS system, maltose and glucose-specific II ABC K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D Pvag_1197 glgx1; glycogen operon protein K01214 ISA; isoamylase [EC:3.2.1.68] D Pvag_1198 treY; Putative maltooligosyl trehalose synthase K06044 treY; (1->4)-alpha-D-glucan 1-alpha-D-glucosylmutase [EC:5.4.99.15] D Pvag_1199 treZ; Malto-oligosyltrehalose trehalohydrolase K01236 treZ; maltooligosyltrehalose trehalohydrolase [EC:3.2.1.141] D Pvag_1732 otsA; Trehalose-6-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347] D Pvag_pPag20219 otsA; alpha,alpha-trehalose-phosphate synthase (UDP-forming) K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347] D Pvag_pPag30401 otsA; alpha,alpha-trehalose-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347] D Pvag_1733 otsB; trehalose-6-phosphate phophatase, biosynthetic K01087 otsB; trehalose 6-phosphate phosphatase [EC:3.1.3.12] D Pvag_pPag20228 otsB; trehalose-6-phosphate phophatase, biosynthetic K01087 otsB; trehalose 6-phosphate phosphatase [EC:3.1.3.12] D Pvag_1012 treA; trehalase, periplasmic K01194 TREH; alpha,alpha-trehalase [EC:3.2.1.28] D Pvag_2594 treF; cytoplasmic trehalase K01194 TREH; alpha,alpha-trehalase [EC:3.2.1.28] D Pvag_0529 pgm; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Pvag_2179 glk; Glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D Pvag_3498 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Pvag_0326 yajF; Probable manno(fructo)kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D Pvag_pPag10156 rbsK; putative carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] C 00620 Pyruvate metabolism [PATH:pva00620] D Pvag_3549 acs; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Pvag_0147 aceE; pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D Pvag_0148 aceF; pyruvate dehydrogenase (dihydrolipoyltransacetylase component) K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D Pvag_0149 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Pvag_0731 pflB; formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D Pvag_1532 adhE; putative alcohol / acetaldehyde dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D Pvag_1623 adhP; alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D Pvag_2032 adhc1; alcohol dehydrogenase class III K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D Pvag_pPag10027 yjgB; Alcohol dehydrogenase K12957 ahr; alcohol/geraniol dehydrogenase (NADP+) [EC:1.1.1.2 1.1.1.183] D Pvag_3528 adhc3; putative zinc-binding alcohol dehydrogenase family protein K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D Pvag_pPag30429 yahK; alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D Pvag_2113 ackA; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D Pvag_2114 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D Pvag_1162 pykF; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Pvag_1657 pykA; pyruvate kinase II K00873 PK; pyruvate kinase [EC:2.7.1.40] D Pvag_0218 accA; acetylCoA carboxylase, carboxytransferase component, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D Pvag_2830 accB; Biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D Pvag_2831 accC; Biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D Pvag_2126 accD; Acetyl-CoA carboxylase beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D Pvag_0790 yccX; Probable acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D Pvag_1888 aldH; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Pvag_1020 aldB; aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-] D Pvag_0301 lldD; L-lactate dehydrogenase K29125 lldD; L-lactate dehydrogenase (quinone) [EC:1.1.5.15] D Pvag_0712 poxb1; pyruvate dehydrogenase K00156 poxB; pyruvate dehydrogenase (quinone) [EC:1.2.5.1] D Pvag_1872 poxb3; putative pyruvate dehyrdogenase K00156 poxB; pyruvate dehydrogenase (quinone) [EC:1.2.5.1] D Pvag_1438 ldhA; putative D-lactate dehydrogenase K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28] D Pvag_0621 dld; D-lactate dehydrogenase K03777 dld; D-lactate dehydrogenase (quinone) [EC:1.1.5.12] D Pvag_1404 aldA; aldehyde dehydrogenase A K07248 aldA; lactaldehyde dehydrogenase / glycolaldehyde dehydrogenase [EC:1.2.1.22 1.2.1.21] D Pvag_1176 gloA; lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D Pvag_pPag30272 yyaH; hypothetical protein K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D Pvag_0240 gloB; probable hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D Pvag_0753 ycbL; Putative Zn-dependent hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D Pvag_1013 ycdW; putative 2-hydroxyacid dehydrogenase in phoh-csgg intergenic region K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81] D Pvag_1879 probable dehydrogenase K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81] D Pvag_3292 yiaE; 2-ketogluconate reductase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215] D Pvag_2021 sfcA; NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D Pvag_1569 ycgM; Fumarylacetoacetate hydrolase domain-containing protein 1 K29029 FAHD2; oxaloacetate tautomerase [EC:5.3.2.2] D Pvag_2806 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D Pvag_3095 mqo; malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4] D Pvag_pPag30235 mqo; malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4] D Pvag_pPag30228 fumB; fumarase B K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D Pvag_1259 fumC; fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D Pvag_3136 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D Pvag_2949 pckA; phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D Pvag_1150 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D Pvag_3488 aceB; malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9] D Pvag_0108 leua1; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D Pvag_1279 leua3; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:pva00630] D Pvag_3489 aceA; Isocitrate lyase K01637 ICL; isocitrate/methylisocitrate lyase [EC:4.1.3.1 4.1.3.30] D Pvag_3488 aceB; malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9] D Pvag_2806 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D Pvag_0543 gltA; Citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D Pvag_1492 acnA; aconitate hydratase K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D Pvag_0154 acnB; aconitate hydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D Pvag_3549 acs; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Pvag_1204 katE; Catalase K03781 katE; catalase [EC:1.11.1.6] D Pvag_1013 ycdW; putative 2-hydroxyacid dehydrogenase in phoh-csgg intergenic region K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81] D Pvag_1879 probable dehydrogenase K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81] D Pvag_3292 yiaE; 2-ketogluconate reductase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215] D Pvag_pPag30179 D-isomer specific 2-hydroxyacid dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29] D Pvag_2933 gph; phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D Pvag_3223 glnA; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Pvag_2298 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Pvag_2527 gcvP; glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D Pvag_2529 gcvT; aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D Pvag_0149 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Pvag_2528 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D Pvag_pPag10102 gip; hypothetical protein K01816 hyi; hydroxypyruvate isomerase [EC:5.3.1.22] D Pvag_2465 yhaE; 2-hydroxy-3-oxopropionate reductase K00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60] D Pvag_2464 yhaD; Glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D Pvag_pPag30034 hfr; putative hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D Pvag_1404 aldA; aldehyde dehydrogenase A K07248 aldA; lactaldehyde dehydrogenase / glycolaldehyde dehydrogenase [EC:1.2.1.22 1.2.1.21] D Pvag_pPag30186 fucO; L-1,2-propanediol oxidoreductase K00048 fucO; lactaldehyde reductase [EC:1.1.1.77] D Pvag_3587 yeaU; putative tartrate dehydrogenase K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83] D Pvag_pPag30035 ttuC; tartrate dehydrogenase K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83] D Pvag_1654 eda; 2-keto-3-deoxygluconate 6-phosphate aldolase and 2-keto-4-hydroxyglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D Pvag_pPag30056 oxdC; oxalate decarboxylase K01569 oxdD; oxalate decarboxylase [EC:4.1.1.2] D Pvag_pPag30267 fdhF; molybdopterin oxidoreductase family protein K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D Pvag_3326 fdoH; formate dehydrogenase-O, iron-sulfur subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit D Pvag_3325 fdoI; formate dehydrogenase, cytochrome protein K00127 fdoI; formate dehydrogenase subunit gamma D Pvag_1540 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D Pvag_0650 hutG; putative N-formylglutamate amidohydrolase K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68] C 00640 Propanoate metabolism [PATH:pva00640] D Pvag_3549 acs; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Pvag_2113 ackA; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D Pvag_2114 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D Pvag_0149 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Pvag_0731 pflB; formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D Pvag_2578 yhdH; zinc-containing alcohol dehydrogenase superfamily K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-] D Pvag_3442 fadB; enoyl-CoA hydratase / dodecenoyl-CoA delta-isomerase / 3-hydroxyacyl-CoA dehydrogenase / 3-hydroxybutyryl-CoA epimerase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D Pvag_2148 fadJ; fatty oxidation complex, alpha subunit K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D Pvag_0218 accA; acetylCoA carboxylase, carboxytransferase component, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D Pvag_2830 accB; Biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D Pvag_2831 accC; Biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D Pvag_2126 accD; Acetyl-CoA carboxylase beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D Pvag_pPag30456 gabT; 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D Pvag_1877 gabT; 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D Pvag_0550 sucC; Succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D Pvag_0551 sucD; Succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D Pvag_3028 mmsA; Methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D Pvag_1492 acnA; aconitate hydratase K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D Pvag_0154 acnB; aconitate hydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D Pvag_3489 aceA; Isocitrate lyase K01637 ICL; isocitrate/methylisocitrate lyase [EC:4.1.3.1 4.1.3.30] D Pvag_0785 mgsA; methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3] D Pvag_1678 glda1; glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6] D Pvag_pPag30186 fucO; L-1,2-propanediol oxidoreductase K00048 fucO; lactaldehyde reductase [EC:1.1.1.77] C 00650 Butanoate metabolism [PATH:pva00650] D Pvag_3442 fadB; enoyl-CoA hydratase / dodecenoyl-CoA delta-isomerase / 3-hydroxyacyl-CoA dehydrogenase / 3-hydroxybutyryl-CoA epimerase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D Pvag_2148 fadJ; fatty oxidation complex, alpha subunit K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D Pvag_1532 adhE; putative alcohol / acetaldehyde dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D Pvag_3587 yeaU; putative tartrate dehydrogenase K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83] D Pvag_pPag30035 ttuC; tartrate dehydrogenase K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83] D Pvag_0546 sdhA; succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D Pvag_0547 sdhB; succinate dehydrogenase, iron sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D Pvag_0544 sdhC; succinate dehydrogenase cytochrome b-556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D Pvag_0545 sdhD; succinate dehydrogenase, hydrophobic subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit D Pvag_pPag30456 gabT; 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D Pvag_1877 gabT; 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D Pvag_0796 putative NAD-dependent aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D Pvag_1891 gabd1; succinic semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D Pvag_2813 gabd3; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D Pvag_pPag30001 yneI; putative aldehyde dehydrogenase K08324 sad; succinate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.24] D Pvag_0731 pflB; formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D Pvag_0109 ilvI; acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Pvag_3111 ilvG; acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Pvag_pPag10120 alsS; acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Pvag_0110 ilvH; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D Pvag_3110 ilvM; acetolactate synthase isozyme II small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6] D Pvag_pPag10119 alsD; Alpha-acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5] D Pvag_1105 fabg3; beta-ketoacyl-acyl carrier protein reductase K03366 butA; meso-butanediol dehydrogenase / (S,S)-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.- 1.1.1.76 1.1.1.304] D Pvag_pPag10121 butA; acetoin reductase K03366 butA; meso-butanediol dehydrogenase / (S,S)-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.- 1.1.1.76 1.1.1.304] D Pvag_1196 oxidoreductase, short chain dehydrogenase/reductase family K18009 budC; meso-butanediol dehydrogenase / (S,S)-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.- 1.1.1.76 1.1.1.304] C 00660 C5-Branched dibasic acid metabolism [PATH:pva00660] D Pvag_0109 ilvI; acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Pvag_3111 ilvG; acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Pvag_pPag10120 alsS; acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Pvag_0110 ilvH; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D Pvag_3110 ilvM; acetolactate synthase isozyme II small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6] D Pvag_pPag10119 alsD; Alpha-acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5] D Pvag_0550 sucC; Succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D Pvag_0551 sucD; Succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D Pvag_0106 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D Pvag_0105 leuD; 3-isopropylmalate dehydratase K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D Pvag_0107 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism [PATH:pva00562] D Pvag_0343 putative inositol monophosphatase protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D Pvag_1355 putative inositol monophosphatase protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D Pvag_2292 suhB; SuhB K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D Pvag_0342 phyK; putative 3-phytase precursor K01093 appA; 4-phytase / acid phosphatase [EC:3.1.3.26 3.1.3.2] D Pvag_3022 iolG; myo-inositol 2-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369] D Pvag_pPag10076 idhA; myo-inositol 2-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369] D Pvag_pPag10103 oxidoreductase, NAD-binding protein K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369] D Pvag_pPag30219 iolG; Putative myo-inositol 2-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369] D Pvag_3029 iolI; Protein iolI K06606 iolI; 2-keto-myo-inositol isomerase [EC:5.3.99.11] D Pvag_pPag30220 iolI; putative IolI protein K06606 iolI; 2-keto-myo-inositol isomerase [EC:5.3.99.11] D Pvag_3021 iolE; Inosose dehydratase K03335 iolE; inosose dehydratase [EC:4.2.1.44] D Pvag_3596 mocC; Rhizopine catabolism protein mocC K03335 iolE; inosose dehydratase [EC:4.2.1.44] D Pvag_3023 iolD; malonic semialdehyde oxidative decarboxylase K03336 iolD; 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) [EC:3.7.1.22] D Pvag_3027 iolB; Myo-inositol catabolism protein IolB K03337 iolB; 5-deoxy-glucuronate isomerase [EC:5.3.1.30] D Pvag_3025 iolC; putative myo-inositol catabolism protein iolC K03338 iolC; 5-dehydro-2-deoxygluconokinase [EC:2.7.1.92] D Pvag_3028 mmsA; Methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D Pvag_3159 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] C 00566 Sulfoquinovose metabolism D Pvag_2806 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:pva00190] D Pvag_2106 nuoA; NADH dehydrogenase I chain A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2] D Pvag_2105 nuoB; NADH dehydrogenase I chain B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2] D Pvag_2104 nuoC; NADH dehydrogenase I chain C/D K13378 nuoCD; NADH-quinone oxidoreductase subunit C/D [EC:7.1.1.2] D Pvag_2103 nuoE; NADH dehydrogenase I chain E K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2] D Pvag_2102 nuoF; NADH dehydrogenase I chain F K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2] D Pvag_2101 nuoG; NADH dehydrogenase I chain G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2] D Pvag_2100 nuoH; NADH dehydrogenase I chain H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2] D Pvag_2099 nuoI; NADH dehydrogenase I chain I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2] D Pvag_2098 nuoJ; NADH dehydrogenase I chain J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2] D Pvag_2097 nuoK; NADH dehydrogenase I chain K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2] D Pvag_2096 nuoL; NADH dehydrogenase I chain L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2] D Pvag_2095 nuoM; NADH dehydrogenase I chain M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2] D Pvag_2094 nuoN; NADH dehydrogenase I chain N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2] D Pvag_0911 ndh; respiratory NADH dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] D Pvag_0546 sdhA; succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D Pvag_0547 sdhB; succinate dehydrogenase, iron sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D Pvag_0544 sdhC; succinate dehydrogenase cytochrome b-556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D Pvag_0545 sdhD; succinate dehydrogenase, hydrophobic subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit D Pvag_0367 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D Pvag_0368 cyoD; Cytochrome o ubiquinol oxidase protein cyoD K02300 cyoD; cytochrome o ubiquinol oxidase subunit IV D Pvag_0369 cyoC; cytochrome o ubiquinol oxidase subunit III K02299 cyoC; cytochrome o ubiquinol oxidase subunit III D Pvag_0370 cyoB; ubiquinol oxidase subunit I K02298 cyoB; cytochrome o ubiquinol oxidase subunit I [EC:7.1.1.3] D Pvag_0371 cyoA; cytochrome o ubiquinol oxidase subunit II K02297 cyoA; cytochrome o ubiquinol oxidase subunit II [EC:7.1.1.3] D Pvag_0552 cydA; cytochrome d ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D Pvag_2591 cioA; probable terminal oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D Pvag_0553 cydb1; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D Pvag_2590 cydb3; probable terminal oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D Pvag_0554 hypothetical protein K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7] D Pvag_3261 atpA; membrane-bound ATP synthase, F1 sector, alpha-subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D Pvag_3263 atpD; membrane-bound ATP synthase, F1 sector, beta-subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D Pvag_3262 atpG; membrane-bound ATP synthase, F1 sector, gamma-subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D Pvag_3260 atpH; membrane-bound ATP synthase, F1 sector, delta-subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D Pvag_3264 atpC; membrane-bound ATP synthase, F1 sector, epsilon-subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D Pvag_3257 atpB; membrane-bound ATP synthase, F0 sector, subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a D Pvag_3259 atpF; ATP synthase subunit B protein K02109 ATPF0B; F-type H+-transporting ATPase subunit b D Pvag_3258 atpE; ATP synthase C chain K02110 ATPF0C; F-type H+-transporting ATPase subunit c D Pvag_2764 ppa; Inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] D Pvag_0975 ppaC; inorganic pyrophosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1] D Pvag_2258 ppk; Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation by Calvin cycle [PATH:pva00710] D Pvag_2545 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D Pvag_1552 gapA; glyceraldehyde-3-phosphate dehydrogenase A K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Pvag_1293 fbaA; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Pvag_2544 fba; fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Pvag_3765 cbbA; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Pvag_2760 fbp; fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D Pvag_3153 glpX; Fructose-1,6-bisphosphatase class II glpX K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D Pvag_1004 tktB; putative N-terminal region of transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Pvag_1005 tkt1; C-terminal region of transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Pvag_2219 tktA; Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Pvag_2548 tkt3; Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Pvag_pPag30527 transketolase-like protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Pvag_pPag30528 putative transketolase beta subunit protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Pvag_2539 rpiA; ribosephosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D Pvag_2918 prkB; probable phosphoribulokinase K28462 prkA_B; phosphoribulokinase [EC:2.7.1.19] D Pvag_3159 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D Pvag_2934 rpe; D-ribulose-5-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D Pvag_0067 talB; transaldolase B K00616 TALDO1; transaldolase [EC:2.2.1.2] D Pvag_2218 talA; transaldolase A K00616 TALDO1; transaldolase [EC:2.2.1.2] D Pvag_3136 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D Pvag_2949 pckA; phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D Pvag_2806 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] C 00720 Other carbon fixation pathways [PATH:pva00720] D Pvag_1150 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D Pvag_3136 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D Pvag_2806 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D Pvag_pPag30228 fumB; fumarase B K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D Pvag_1259 fumC; fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D Pvag_0546 sdhA; succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D Pvag_0547 sdhB; succinate dehydrogenase, iron sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D Pvag_0544 sdhC; succinate dehydrogenase cytochrome b-556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D Pvag_0545 sdhD; succinate dehydrogenase, hydrophobic subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit D Pvag_pPag30231 putative NADH:flavin oxidoreductase K28482 frd; fumarate reductase (NADH) [EC:1.3.1.6] D Pvag_0551 sucD; Succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D Pvag_0550 sucC; Succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D Pvag_0940 icdA; isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D Pvag_1492 acnA; aconitate hydratase K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D Pvag_0154 acnB; aconitate hydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D Pvag_0218 accA; acetylCoA carboxylase, carboxytransferase component, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D Pvag_2830 accB; Biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D Pvag_2831 accC; Biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D Pvag_2126 accD; Acetyl-CoA carboxylase beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D Pvag_0441 folD; 5,10-methylene-tetrahydrofolate dehydrogenase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D Pvag_3137 metF; 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D Pvag_2114 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D Pvag_2113 ackA; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D Pvag_3549 acs; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] C 00680 Methane metabolism [PATH:pva00680] D Pvag_pPag10062 adhC; putative alcohol dehydrogenase K00148 fdhA; glutathione-independent formaldehyde dehydrogenase [EC:1.2.1.46] D Pvag_2032 adhc1; alcohol dehydrogenase class III K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D Pvag_2033 yeiG; putative esterase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12] D Pvag_pPag30267 fdhF; molybdopterin oxidoreductase family protein K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D Pvag_3326 fdoH; formate dehydrogenase-O, iron-sulfur subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit D Pvag_3325 fdoI; formate dehydrogenase, cytochrome protein K00127 fdoI; formate dehydrogenase subunit gamma D Pvag_2298 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Pvag_pPag30179 D-isomer specific 2-hydroxyacid dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29] D Pvag_pPag30034 hfr; putative hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D Pvag_0973 eno1; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Pvag_2458 eno3; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Pvag_3136 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D Pvag_2806 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D Pvag_1293 fbaA; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Pvag_2544 fba; fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Pvag_3765 cbbA; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Pvag_2760 fbp; fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D Pvag_3153 glpX; Fructose-1,6-bisphosphatase class II glpX K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D Pvag_1290 pfka1; putative 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Pvag_3162 pfka3; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Pvag_2113 ackA; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D Pvag_2114 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D Pvag_3549 acs; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Pvag_1150 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D Pvag_0576 gpma1; Phosphoglycerate mutase 1 K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D Pvag_0972 gpma3; Phosphoglycerate mutase 1 K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D Pvag_0057 gpmB; phosphoglyceromutase 2 K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D Pvag_2537 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D Pvag_pPag30144 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D Pvag_pPag30411 serA; putative D-isomer specific 2-hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D Pvag_0734 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D Pvag_0036 serB; 3-phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D Pvag_pPag10020 putative lipoprotein K05979 comB; 2-phosphosulfolactate phosphatase [EC:3.1.3.71] C 00910 Nitrogen metabolism [PATH:pva00910] D Pvag_2414 narK; Nitrate transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D Pvag_1092 nasF; Nitrate transport protein nrtA K15576 nrtA; nitrate/nitrite transport system substrate-binding protein D Pvag_1093 nasE; Nitrate transport permease protein nrtB K15577 nrtB; nitrate/nitrite transport system permease protein D Pvag_1094 nasD; nitrate ABC transporter, ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4] D Pvag_2413 narG; nitrate reductase alpha chain K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-] D Pvag_2412 narH; nitrate reductase beta chain K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-] D Pvag_2410 narI; respiratory nitrate reductase 1 gamma chain K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-] D Pvag_1096 nasA; nitrate reductase K00372 nasC; assimilatory nitrate reductase catalytic subunit [EC:1.7.99.-] D Pvag_1095 nirb1; nitrite reductase K00361 nasB; nitrite reductase [NAD(P)H] [EC:1.7.1.4] D Pvag_2929 nirb3; nitrite reductase (NAD(P)H) subunit K00362 nirB; nitrite reductase (NADH) large subunit [EC:1.7.1.15] D Pvag_2930 nirD; nitrite reductase K00363 nirD; nitrite reductase (NADH) small subunit [EC:1.7.1.15] D Pvag_pPag30309 gdhA; glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D Pvag_3223 glnA; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Pvag_3627 gltB; glutamate synthase (NADPH) large chain K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D Pvag_0173 yadF; putative carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] D Pvag_0681 cynT; Carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] D Pvag_2714 Carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] D Pvag_1579 cah; Carbonic anhydrase K01674 cah; carbonic anhydrase [EC:4.2.1.1] C 00920 Sulfur metabolism [PATH:pva00920] D Pvag_2212 cysP; Thiosulfate-binding protein precursor K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein D Pvag_3161 sbp; Sulfate-binding protein precursor K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D Pvag_2211 cysT; Probable sulfate transport system permease protein cysT K02046 cysU; sulfate/thiosulfate transport system permease protein D Pvag_2210 cysW; Sulfate transport system permease protein cysW K02047 cysW; sulfate/thiosulfate transport system permease protein D Pvag_2209 cysA; ATP-binding component of sulfate permease A protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D Pvag_2913 tauA; Taurine-binding periplasmic protein precursor K15551 tauA; taurine transport system substrate-binding protein D Pvag_2911 tauC; Taurine transport permease protein tauC K15552 tauC; taurine transport system permease protein D Pvag_2912 tauB; taurine ATP-binding component of a transport system K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7] D Pvag_2910 tauD; taurine dioxygenase, 2-oxoglutarate-dependent K03119 tauD; taurine dioxygenase [EC:1.14.11.17] D Pvag_0762 ssuA; Putative aliphatic sulfonates-binding protein precursor K15553 ssuA; sulfonate transport system substrate-binding protein D Pvag_0760 ssuC; Sulfonate transport permease protein ssuC K15554 ssuC; sulfonate transport system permease protein D Pvag_0759 ssuB; Sulfonate import ATP-binding protein ssuB K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D Pvag_0761 ssuD; alkanesulfonate monooxygenase K04091 ssuD; alkanesulfonate monooxygenase [EC:1.14.14.5 1.14.14.34] D Pvag_pPag10058 msuD; alkanesulfonate monooxygenase K04091 ssuD; alkanesulfonate monooxygenase [EC:1.14.14.5 1.14.14.34] D Pvag_0763 ssuE; putative NAD(P)H-dependent FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38] D Pvag_2448 cysN; ATP-sulfurylase, subunit 1 (ATP:sulfate adenylyltransferase) K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D Pvag_2449 cysD; ATP-sulfurylase, subunit 1 (ATP:sulfate adenylyltransferase) K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D Pvag_2447 cysC; adenosine 5'-phosphosulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25] D Pvag_2771 cysQ; PAPS (adenosine 3'-phosphate 5'-phosphosulfate) 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D Pvag_2453 cysH; 3'-phosphoadenosine 5'-phosphosulfate (PAPS) reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10] D Pvag_2455 cysJ; sulfite reductase K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2] D Pvag_3626 yvgR; sulfite reductase (NADPH) flavoprotein alpha-component K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2] D Pvag_2454 cysI; sulfite reductase (NADPH) hemoprotein beta-component K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2] D Pvag_2286 sseA; putative thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D Pvag_2965 glpE; Putative thiosulfate sulfurtransferase K02439 glpE; thiosulfate sulfurtransferase [EC:2.8.1.1] D Pvag_3170 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D Pvag_2201 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D Pvag_3487 metA; homoserine transsuccinylase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31] D Pvag_3139 metB; cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D Pvag_pPag30468 sfnG; putative FMNH2-dependent dimethyl sulfone monooxygenase K17228 sfnG; dimethylsulfone monooxygenase [EC:1.14.14.35] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:pva00061] D Pvag_0218 accA; acetylCoA carboxylase, carboxytransferase component, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D Pvag_2830 accB; Biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D Pvag_2831 accC; Biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D Pvag_2126 accD; Acetyl-CoA carboxylase beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D Pvag_0834 putative acyl carrier protein K02078 acpP; acyl carrier protein D Pvag_0835 Acyl carrier protein (ACP) K02078 acpP; acyl carrier protein D Pvag_0895 acpP; Acyl carrier protein (ACP) K02078 acpP; acyl carrier protein D Pvag_0893 fabD; malonyl-CoA-[acyl-carrier-protein] transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D Pvag_0892 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D Pvag_0844 fabF2; putative 3-oxoacyl-(acyl carrier protein) synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D Pvag_2137 fabB; 3-oxoacyl-ACP synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D Pvag_0847 fabF3; putative beta-ketoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D Pvag_0896 fabF; 3-oxoacyl ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D Pvag_pPag10107 fabF; 3-oxoacyl-acyl carrier protein synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D Pvag_0846 fabG2; putative beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Pvag_0894 fabg1; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Pvag_3686 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Pvag_0776 fabA; 3-hydroxydecanoyl-[acyl-carrier-protein]dehydratase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14] D Pvag_0213 fabZ; (3R)-hydroxymyristol acyl carrier protein dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D Pvag_1471 fabI; enoyl-ACP-reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D Pvag_1575 fadD; acyl-CoA synthetase (long-chain-fatty-acid--CoA ligase) K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:pva00071] D Pvag_2149 fadI; Fatty acid oxidation complex, beta subunit K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D Pvag_3441 fadA; small (beta) subunit of the fatty acid-oxidizing multienzyme complex K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D Pvag_3442 fadB; enoyl-CoA hydratase / dodecenoyl-CoA delta-isomerase / 3-hydroxyacyl-CoA dehydrogenase / 3-hydroxybutyryl-CoA epimerase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D Pvag_2148 fadJ; fatty oxidation complex, alpha subunit K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D Pvag_0269 yafH; putative acyl-CoA dehydrogenase K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-] D Pvag_1575 fadD; acyl-CoA synthetase (long-chain-fatty-acid--CoA ligase) K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D Pvag_3708 aas; long-chain-fatty-acid--[acyl-carrier-protein]ligase K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20] D Pvag_2032 adhc1; alcohol dehydrogenase class III K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D Pvag_1532 adhE; putative alcohol / acetaldehyde dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D Pvag_1623 adhP; alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D Pvag_1888 aldH; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00073 Cutin, suberine and wax biosynthesis C 00074 Mycolic acid biosynthesis [PATH:pva00074] D Pvag_2311 acpS; holo-ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D Pvag_2066 entD; phosphopantetheinyl transferase entD K02362 entD; enterobactin synthetase component D / holo-[acyl-carrier protein] synthase [EC:6.3.2.14 2.7.8.7] D Pvag_0834 putative acyl carrier protein K02078 acpP; acyl carrier protein D Pvag_0835 Acyl carrier protein (ACP) K02078 acpP; acyl carrier protein D Pvag_0895 acpP; Acyl carrier protein (ACP) K02078 acpP; acyl carrier protein D Pvag_0893 fabD; malonyl-CoA-[acyl-carrier-protein] transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:pva00561] D Pvag_2464 yhaD; Glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D Pvag_pPag30034 hfr; putative hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D Pvag_1888 aldH; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Pvag_3528 adhc3; putative zinc-binding alcohol dehydrogenase family protein K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D Pvag_pPag30429 yahK; alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D Pvag_pPag30187 dhbK; dihydroxyacetone kinase family protein K28825 dhaK; glycerone kinase [EC:2.7.1.29] D Pvag_1678 glda1; glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6] D Pvag_1006 glpk1; putative glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D Pvag_3152 glpk3; Glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D Pvag_3512 plsB; glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D Pvag_0891 plsX; Fatty acid/phospholipid synthesis protein plsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D Pvag_2664 ygiH; UPF0078 membrane protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Pvag_2639 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D Pvag_3513 dgkA; Diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] C 00564 Glycerophospholipid metabolism [PATH:pva00564] D Pvag_3171 gpsA; glycerol-3-phosphate dehydrogenase (NAD+) K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D Pvag_2966 glpD; aerobic glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] D Pvag_3512 plsB; glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D Pvag_2664 ygiH; UPF0078 membrane protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Pvag_2639 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D Pvag_3513 dgkA; Diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D Pvag_3413 pldA; Outer membrane phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] D Pvag_3419 pldB; putative lysophospholipase L2 K01048 pldB; lysophospholipase [EC:3.1.1.5] D Pvag_2997 ugpQ; glycerophosphodiester phosphodiesterase, cytosolic K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D Pvag_3708 aas; long-chain-fatty-acid--[acyl-carrier-protein]ligase K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20] D Pvag_3160 cdh1; putative CDP-diacylglycerol phosphotidylhydrolase K01521 cdh; CDP-diacylglycerol pyrophosphatase [EC:3.6.1.26] D Pvag_3762 cdh3; CDP-diacylglycerol phosphotidylhydrolase K01521 cdh; CDP-diacylglycerol pyrophosphatase [EC:3.6.1.26] D Pvag_0208 cdsA; phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D Pvag_2369 pssA; phosphatidylserine synthase K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D Pvag_2804 psd; Phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D Pvag_0815 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D Pvag_0357 pgpA; phosphatidylglycerophosphatase K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27] D Pvag_1490 pgpB; phosphatidylglycerophosphatase B K01096 pgpB; phosphatidylglycerophosphatase B [EC:3.1.3.27 3.6.1.75 3.1.3.4 3.6.1.27] D Pvag_2308 yfhB; Uncharacterized protein yfhB K18697 pgpC; phosphatidylglycerophosphatase C [EC:3.1.3.27] D Pvag_0606 ybhO; putative phospholipase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] D Pvag_1522 cls; cardiolipin synthetase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] D Pvag_0851 ymdC; Cardiolipin synthetase K06132 clsC; cardiolipin synthase C [EC:2.7.8.-] C 00565 Ether lipid metabolism [PATH:pva00565] D Pvag_3413 pldA; Outer membrane phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] C 00600 Sphingolipid metabolism [PATH:pva00600] D Pvag_0310 lacZ; beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D Pvag_0619 bcc1; beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] C 00590 Arachidonic acid metabolism D Pvag_3413 pldA; Outer membrane phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] C 00591 Linoleic acid metabolism D Pvag_3413 pldA; Outer membrane phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] C 00592 alpha-Linolenic acid metabolism [PATH:pva00592] D Pvag_3413 pldA; Outer membrane phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] D Pvag_2149 fadI; Fatty acid oxidation complex, beta subunit K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D Pvag_3441 fadA; small (beta) subunit of the fatty acid-oxidizing multienzyme complex K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 01040 Biosynthesis of unsaturated fatty acids [PATH:pva01040] D Pvag_0431 tesA; acyl-CoA thioesterase I K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D Pvag_0393 tesB; acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.20] D Pvag_1515 yciA; putative acyl-CoA thioester hydrolase K10806 yciA; acyl-CoA thioesterase [EC:3.1.2.-] B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:pva00230] D Pvag_2649 nudf3; ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D Pvag_2944 yrfE; ADP compounds hydrolase K08312 nudE; ADP compounds hydrolase [EC:3.6.1.-] D Pvag_2602 deoB; Phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7] D Pvag_0529 pgm; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Pvag_1070 prsA; Phosphoribosylpyrophosphate synthetase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D Pvag_2123 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D Pvag_3481 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D Pvag_2254 purN; phosphoribosylglycinamide formyltransferase 1 K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D Pvag_1653 purT; phosphoribosylglycinamide formyltransferase 2 K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21] D Pvag_2305 purL; phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] D Pvag_2253 purM; phosphoribosylaminoimidazole synthetase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D Pvag_0434 purK; phosphoribosylaminoimidazole carboxylase ATPase subunit K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18] D Pvag_0435 purE; phosphoribosylaminoimidazole carboxylase catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D Pvag_2234 purC; phosphoribosylaminoimidazole-succinocarboxamidesynthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D Pvag_0935 purB; Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D Pvag_3482 purH; phosphoribosylaminoimidazolecarboxamideformyltra nsferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D Pvag_0410 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D Pvag_0420 ushA; UDP-sugar hydrolase (5'-nucleotidase) K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D Pvag_2440 surE; Survival protein surE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D Pvag_0517 nagD; nagD; putative phosphatase in N-acetylglucosamine metabolism K02566 nagD; 5'-nucleotidase [EC:3.1.3.5] D Pvag_2946 yrfG; Predicted hydrolase K20881 yrfG; GMP/IMP 5'-nucleotidase [EC:3.1.3.-] D Pvag_0418 gsk; inosine-guanosine kinase K00892 gsk; inosine kinase [EC:2.7.1.73] D Pvag_2601 deoD; purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1] D Pvag_0324 yaiE; UPF0345 protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2] D Pvag_2378 yfiH; UPF0124 protein yfiH K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D Pvag_2716 UPF0124 protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D Pvag_0172 hpt; hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D Pvag_2269 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D Pvag_2283 ndk; Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D Pvag_0056 yjjX; UPF0244 protein K01529 yjjX; inosine/xanthosine triphosphatase [EC:3.6.1.73] D Pvag_2567 yggV; HAM1 protein K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D Pvag_pPag30326 nucleoside-triphosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D Pvag_0278 gpt1; guanine-hypoxanthine phosphoribosyltransferase K00769 gpt; xanthine phosphoribosyltransferase [EC:2.4.2.22] D Pvag_1371 xdhA; xanthine dehydrogenase, XdhA subunit K13481 xdhA; xanthine dehydrogenase small subunit [EC:1.17.1.4] D Pvag_1370 xdhB; xanthine dehydrogenase K13482 xdhB; xanthine dehydrogenase large subunit [EC:1.17.1.4] D Pvag_pPag30476 aomL; aldehyde oxidase large subunit K11177 yagR; xanthine dehydrogenase YagR molybdenum-binding subunit [EC:1.17.1.4] D Pvag_pPag30477 aomM; aldehyde oxidase medium subunit K11178 yagS; xanthine dehydrogenase YagS FAD-binding subunit [EC:1.17.1.4] D Pvag_pPag30478 aomS; aldehyde oxidase small subunit K13483 yagT; xanthine dehydrogenase YagT iron-sulfur-binding subunit D Pvag_1018 guaa1; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D Pvag_2268 guaa3; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D Pvag_0136 guaC; GMP reductase K00364 guaC; GMP reductase [EC:1.7.1.7] D Pvag_1372 guaD; guanine deaminase K01487 guaD; guanine deaminase [EC:3.5.4.3] D Pvag_3211 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D Pvag_2087 nrdA; ribonucleoside-diphosphate reductase alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Pvag_2359 nrdE; ribonucleoside-diphosphate reductase alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Pvag_2088 nrdB; ribonucleoside-diphosphate reductase 1 beta chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D Pvag_2360 nrdF; ribonucleoside-diphosphate reductase beta chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D Pvag_3699 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D Pvag_0195 dgt; deoxyguanosine triphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1] D Pvag_2109 yfbR; UPF0207 protein yfbR K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89] D Pvag_3213 spoT; guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D Pvag_0990 ppx1; putative exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D Pvag_2259 ppx3; Exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D Pvag_3379 gppA; guanosine pentaphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D Pvag_2461 rela1; GTP pyrophosphokinase K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5] D Pvag_3402 cyaA; Adenylate cyclase K05851 cyaA; adenylate cyclase, class 1 [EC:4.6.1.1] D Pvag_2787 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D Pvag_1256 add; Adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4] D Pvag_1827 amn; AMP nucleosidase K01241 amn; AMP nucleosidase [EC:3.2.2.4] D Pvag_2476 ygdH; Uncharacterized protein ygdH K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-] D Pvag_2772 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6] D Pvag_0416 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D Pvag_2460 mazG; Protein mazG K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D Pvag_2240 cpdA; Protein icc K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53] D Pvag_2647 icc; Uncharacterized protein K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53] D Pvag_0089 apaH; diadenosine tetraphosphatase K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41] D Pvag_2447 cysC; adenosine 5'-phosphosulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25] D Pvag_2448 cysN; ATP-sulfurylase, subunit 1 (ATP:sulfate adenylyltransferase) K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D Pvag_2449 cysD; ATP-sulfurylase, subunit 1 (ATP:sulfate adenylyltransferase) K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D Pvag_1367 kmo; hypothetical protein K16839 hpxO; FAD-dependent urate hydroxylase [EC:1.14.13.113] D Pvag_pPag30384 Protein aegA K22879 hpyO; FAD-dependent urate hydroxylase [EC:1.14.13.113] D Pvag_0261 yedx1; Transthyretin-like protein precursor K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17] D Pvag_1337 yedx3; Transthyretin-like protein precursor K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17] D Pvag_0260 uao; Uricase (Urate oxidase) K16840 hpxQ; 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase [EC:4.1.1.97] D Pvag_0247 hyuE; Hydantoin racemase K16841 hpxA; allantoin racemase [EC:5.1.99.3] D Pvag_0248 hypothetical protein K16842 hpxB; allantoinase [EC:3.5.2.5] D Pvag_0259 amaB; N-carbamyl-L-amino acid amidohydrolase K02083 allC; allantoate deiminase [EC:3.5.3.9] D Pvag_0258 pucG; Aminotransferase class-V K00839 pucG; (S)-ureidoglycine---glyoxylate transaminase [EC:2.6.1.112] D Pvag_0250 gata1; probable amidase K22601 hpxY; oxamate carbamoyltransferase [EC:2.1.3.5] D Pvag_0252 ggt1; putative gamma-glutamyltranspeptidase K22602 hpxW; oxamate amidohydrolase [EC:3.5.1.126] C 00240 Pyrimidine metabolism [PATH:pva00240] D Pvag_0085 carB; carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D Pvag_0084 carA; carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D Pvag_3712 pyrB; aspartate carbamoyltransferase, catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D Pvag_3711 pyrI; aspartate carbamoyltransferase regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit D Pvag_0865 pyrC; dihydro-orotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D Pvag_2747 dho; Protein phnM K01465 URA4; dihydroorotase [EC:3.5.2.3] D Pvag_0767 pyrD; Dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2] D Pvag_3200 pyrE; Orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D Pvag_1487 pyrF; Orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D Pvag_0204 pyrH; Uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D Pvag_2283 ndk; Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D Pvag_2460 mazG; Protein mazG K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D Pvag_2821 yhdE; Maf-like protein yceF 2 K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D Pvag_2719 ygjP; Uncharacterized protein ygjP K07043 upp; UTP pyrophosphatase [EC:3.6.1.-] D Pvag_2459 pyrg3; CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2] D Pvag_0736 cmk; Cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D Pvag_1989 udk; Uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48] D Pvag_0420 ushA; UDP-sugar hydrolase (5'-nucleotidase) K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D Pvag_2440 surE; Survival protein surE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D Pvag_0517 nagD; nagD; putative phosphatase in N-acetylglucosamine metabolism K02566 nagD; 5'-nucleotidase [EC:3.1.3.5] D Pvag_0034 yjjG; Uncharacterized HAD-hydrolase K08723 yjjG; pyrimidine 5'-nucleotidase [EC:3.1.3.-] D Pvag_3427 udp; Uridine phosphorylase K00757 udp; uridine phosphorylase [EC:2.4.2.3] D Pvag_0324 yaiE; UPF0345 protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2] D Pvag_2252 upp; Uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D Pvag_2772 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6] D Pvag_2476 ygdH; Uncharacterized protein ygdH K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-] D Pvag_2020 cdd; cytidine/deoxycytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5] D Pvag_2928 codA; cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21] D Pvag_3699 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D Pvag_1988 dcd; deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D Pvag_2087 nrdA; ribonucleoside-diphosphate reductase alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Pvag_2359 nrdE; ribonucleoside-diphosphate reductase alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Pvag_2088 nrdB; ribonucleoside-diphosphate reductase 1 beta chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D Pvag_2360 nrdF; ribonucleoside-diphosphate reductase beta chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D Pvag_2109 yfbR; UPF0207 protein yfbR K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89] D Pvag_0899 tmk; Thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D Pvag_3198 dut; deoxyuridinetriphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D Pvag_2603 deoA; Thymidine phosphorylase K00758 deoA; thymidine phosphorylase [EC:2.4.2.4] D Pvag_1533 tdk; Thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21] D Pvag_2500 thyA; thymidylate synthetase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D Pvag_0805 ycdM; Putative monooxygenase K09018 rutA; pyrimidine oxygenase [EC:1.14.99.46] D Pvag_0802 ycdH; 4-hydroxyphenylacetate-3-hydroxylase small chain K09024 rutF; flavin reductase [EC:1.5.1.-] D Pvag_0804 ycdl1; Uncharacterized isochorismatase family protein K09020 rutB; ureidoacrylate peracid hydrolase [EC:3.5.1.110] D Pvag_0803 ycdK; UPF0076 protein K09021 rutC; aminoacrylate peracid reductase D Pvag_1373 ydfG; putative oxidoreductase K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-] D Pvag_3315 ycdI; putative enzyme K09019 rutE; 3-hydroxypropanoate dehydrogenase [EC:1.1.1.-] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:pva00250] D Pvag_0754 aspC; aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D Pvag_2322 nadB; L-aspartate oxidase (Quinolinate synthetase B) K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D Pvag_1548 ansA; cytoplasmic L-asparaginase I K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D Pvag_0675 ybiK; putative asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D Pvag_0516 asnB; asparagine synthetase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D Pvag_0262 cpa; N-carbamoylputrescine amidase K13566 NIT2; omega-amidase [EC:3.5.1.3] D Pvag_2108 yfbQ; putative aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D Pvag_3608 aspA; aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1] D Pvag_3132 argG; Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D Pvag_3131 argH; Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D Pvag_2787 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D Pvag_0935 purB; Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D Pvag_3712 pyrB; aspartate carbamoyltransferase, catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D Pvag_3711 pyrI; aspartate carbamoyltransferase regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit D Pvag_pPag30456 gabT; 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D Pvag_1877 gabT; 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D Pvag_0796 putative NAD-dependent aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D Pvag_1891 gabd1; succinic semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D Pvag_2813 gabd3; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D Pvag_pPag30001 yneI; putative aldehyde dehydrogenase K08324 sad; succinate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.24] D Pvag_3627 gltB; glutamate synthase (NADPH) large chain K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D Pvag_pPag30309 gdhA; glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D Pvag_1746 putA; 1-pyrroline-5-carboxylate dehydrogenase / proline dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D Pvag_3223 glnA; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Pvag_0085 carB; carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D Pvag_0084 carA; carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D Pvag_pPag30181 yneH; putative glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D Pvag_3266 glmS; glucosamine--fructose-6-phosphate aminotransferase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Pvag_2123 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:pva00260] D Pvag_3499 lysC; aspartate kinase III K00928 lysC; aspartate kinase [EC:2.7.2.4] D Pvag_0062 thrA; bifunctional aspartokinase/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D Pvag_3138 metL; aspartokinase II/homoserine dehydrogenase, methionine-sensitive K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3] D Pvag_2982 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Pvag_0063 thrB; Homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39] D Pvag_0064 thrC; Threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D Pvag_0711 ltaA; L-allo-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48] D Pvag_2298 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Pvag_pPag30179 D-isomer specific 2-hydroxyacid dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29] D Pvag_1013 ycdW; putative 2-hydroxyacid dehydrogenase in phoh-csgg intergenic region K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81] D Pvag_1879 probable dehydrogenase K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81] D Pvag_3292 yiaE; 2-ketogluconate reductase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215] D Pvag_2464 yhaD; Glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D Pvag_pPag30034 hfr; putative hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D Pvag_0576 gpma1; Phosphoglycerate mutase 1 K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D Pvag_0972 gpma3; Phosphoglycerate mutase 1 K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D Pvag_0057 gpmB; phosphoglyceromutase 2 K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D Pvag_2537 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D Pvag_pPag30144 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D Pvag_pPag30411 serA; putative D-isomer specific 2-hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D Pvag_0734 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D Pvag_0036 serB; 3-phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D Pvag_1373 ydfG; putative oxidoreductase K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-] D Pvag_3180 kbl; 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29] D Pvag_3179 tdh; threonine 3-dehydrogenase K00060 tdh; threonine 3-dehydrogenase [EC:1.1.1.103] D Pvag_2527 gcvP; glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D Pvag_2529 gcvT; aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D Pvag_0149 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Pvag_2528 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D Pvag_2369 pssA; phosphatidylserine synthase K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D Pvag_1616 betA; choline dehydrogenase K00108 betA; choline dehydrogenase [EC:1.1.99.1] D Pvag_1615 betB; betaine aldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8] D Pvag_1587 sdaA; L-serine deaminase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D Pvag_1861 tdcB; pyridoxal-phosphate dependent enzyme K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D Pvag_3107 ilvA; Threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D Pvag_1289 sdsL; Pyridoxal-phosphate dependent enzyme K17989 SDS; L-serine/L-threonine ammonia-lyase [EC:4.3.1.17 4.3.1.19] D Pvag_pPag30500 ygeA; putative aspartate/glutamate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10] D Pvag_1509 trpA; tryptophan synthase, alpha protein K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D Pvag_1508 trpB; Tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D Pvag_pPag30242 dat; diaminobutyrate--2-oxoglutarateaminotransferase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76] D Pvag_pPag30241 ddc; L-2,4-diaminobutyrate decarboxylase K13745 ddc; L-2,4-diaminobutyrate decarboxylase [EC:4.1.1.86] C 00270 Cysteine and methionine metabolism [PATH:pva00270] D Pvag_3170 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D Pvag_2201 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D Pvag_2634 metC; beta-cystathionase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D Pvag_1710 patB; aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D Pvag_2353 mmuM; homocysteine S-methyltransferase K00547 mmuM; homocysteine S-methyltransferase [EC:2.1.1.10] D Pvag_3492 metH; B12-dependent homocysteine-N5-methyltetrahydrofolate transmethylase, repressor of MetE and MetF K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D Pvag_3425 metE; tetrahydropteroyltriglutamate methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D Pvag_pPag30149 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D Pvag_2553 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D Pvag_0167 speD; S-adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D Pvag_0168 speE; Spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D Pvag_0811 phzI; Autoinducer synthesis protein phzI K13061 rhlI; acyl homoserine lactone synthase [EC:2.3.1.184] D Pvag_pPag30142 pagI; Autoinducer synthesis protein PagI K22956 expI; acyl homoserine lactone synthase [EC:2.3.1.184] D Pvag_0194 pfs; 5'-methylthioadenosine nucleosidase / S-adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9] D Pvag_0268 ykrT; putative 5-methylthioribose kinase K00899 mtnK; 5-methylthioribose kinase [EC:2.7.1.100] D Pvag_2378 yfiH; UPF0124 protein yfiH K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D Pvag_2716 UPF0124 protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D Pvag_0267 eif; putative translation initiation factor eIF-2B alpha subunit K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23] D Pvag_0264 apip; hypothetical protein K08964 mtnB; methylthioribulose-1-phosphate dehydratase [EC:4.2.1.109] D Pvag_0265 masA; enolase-phosphatase K09880 mtnC; enolase-phosphatase E1 [EC:3.1.3.77] D Pvag_0266 acireductone dioxygenase, ARD K08967 mtnD; 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase [EC:1.13.11.53 1.13.11.54] D Pvag_3525 tyrB; tyrosine aminotransferase, tyrosine repressible K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D Pvag_pPag30194 putative aminotransferase K08969 mtnE; L-glutamine---4-(methylsulfanyl)-2-oxobutanoate aminotransferase [EC:2.6.1.117] D Pvag_0171 mdeA; methionine gamma-lyase K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11] D Pvag_1606 UPF0067 protein yebR K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14] D Pvag_1811 dcm; DNA cytosine methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Pvag_2393 luxS; S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21] D Pvag_3499 lysC; aspartate kinase III K00928 lysC; aspartate kinase [EC:2.7.2.4] D Pvag_0062 thrA; bifunctional aspartokinase/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D Pvag_3138 metL; aspartokinase II/homoserine dehydrogenase, methionine-sensitive K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3] D Pvag_2982 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Pvag_0063 thrB; Homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39] D Pvag_3487 metA; homoserine transsuccinylase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31] D Pvag_3139 metB; cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D Pvag_3109 ilvE; branched-chain amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Pvag_2394 gshA; gamma-glutamate-cysteine ligase K01919 gshA; glutamate---cysteine ligase [EC:6.3.2.2] D Pvag_0754 aspC; aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D Pvag_2286 sseA; putative thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D Pvag_pPag30500 ygeA; putative aspartate/glutamate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10] D Pvag_1754 yedO; putative 1-aminocyclopropane-1-carboxylate deaminase K05396 dcyD; D-cysteine desulfhydrase [EC:4.4.1.15] D Pvag_0387 cbs; putative lyase K28981 cds1; L-cysteine desulfidase [EC:4.4.1.28] D Pvag_2806 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D Pvag_1587 sdaA; L-serine deaminase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D Pvag_1289 sdsL; Pyridoxal-phosphate dependent enzyme K17989 SDS; L-serine/L-threonine ammonia-lyase [EC:4.3.1.17 4.3.1.19] D Pvag_2208 cysM; cysteine synthase B K12339 cysM; S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) [EC:2.5.1.144] D Pvag_2537 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D Pvag_pPag30144 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D Pvag_pPag30411 serA; putative D-isomer specific 2-hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D Pvag_0734 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00280 Valine, leucine and isoleucine degradation [PATH:pva00280] D Pvag_3109 ilvE; branched-chain amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Pvag_0149 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Pvag_3442 fadB; enoyl-CoA hydratase / dodecenoyl-CoA delta-isomerase / 3-hydroxyacyl-CoA dehydrogenase / 3-hydroxybutyryl-CoA epimerase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D Pvag_2148 fadJ; fatty oxidation complex, alpha subunit K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D Pvag_2149 fadI; Fatty acid oxidation complex, beta subunit K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D Pvag_3441 fadA; small (beta) subunit of the fatty acid-oxidizing multienzyme complex K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D Pvag_1277 putative dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] D Pvag_3028 mmsA; Methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D Pvag_1888 aldH; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Pvag_1877 gabT; 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:pva00290] D Pvag_1861 tdcB; pyridoxal-phosphate dependent enzyme K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D Pvag_3107 ilvA; Threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D Pvag_1289 sdsL; Pyridoxal-phosphate dependent enzyme K17989 SDS; L-serine/L-threonine ammonia-lyase [EC:4.3.1.17 4.3.1.19] D Pvag_0106 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D Pvag_0105 leuD; 3-isopropylmalate dehydratase K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D Pvag_0107 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D Pvag_0109 ilvI; acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Pvag_3111 ilvG; acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Pvag_pPag10120 alsS; acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Pvag_0110 ilvH; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D Pvag_3110 ilvM; acetolactate synthase isozyme II small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6] D Pvag_3105 ilvC; Ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D Pvag_3108 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D Pvag_3109 ilvE; branched-chain amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Pvag_3293 avtA; valine--pyruvate aminotransferase K00835 avtA; valine--pyruvate aminotransferase [EC:2.6.1.66] D Pvag_2108 yfbQ; putative aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D Pvag_0108 leua1; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D Pvag_1279 leua3; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:pva00300] D Pvag_3499 lysC; aspartate kinase III K00928 lysC; aspartate kinase [EC:2.7.2.4] D Pvag_0062 thrA; bifunctional aspartokinase/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D Pvag_3138 metL; aspartokinase II/homoserine dehydrogenase, methionine-sensitive K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3] D Pvag_2982 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Pvag_0159 dapa1; putative dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D Pvag_1307 dapa3; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D Pvag_2236 dapa5; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D Pvag_0082 dapB; Dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D Pvag_0199 dapD; 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117] D Pvag_2922 argD; acetylornithine delta-aminotransferase / N-succinyldiaminopimelate aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D Pvag_2229 dapE; N-succinyl-diaminopimelate deacylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D Pvag_3725 arge3; acetylornithine deacetylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D Pvag_3404 dapF; Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D Pvag_2509 lysA; Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D Pvag_0116 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D Pvag_0117 murF; D-alanine:D-alanine-adding enzyme K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:pva00310] D Pvag_0549 sucB; 2-oxoglutarate dehydrogenase (dihydrolipoyltranssuccinase E2 component) K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D Pvag_0149 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Pvag_3442 fadB; enoyl-CoA hydratase / dodecenoyl-CoA delta-isomerase / 3-hydroxyacyl-CoA dehydrogenase / 3-hydroxybutyryl-CoA epimerase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D Pvag_2148 fadJ; fatty oxidation complex, alpha subunit K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D Pvag_pPag30500 ygeA; putative aspartate/glutamate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10] D Pvag_0219 ldcC; lysine decarboxylase K01582 E4.1.1.18; lysine decarboxylase [EC:4.1.1.18] D Pvag_1877 gabT; 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D Pvag_0796 putative NAD-dependent aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D Pvag_1891 gabd1; succinic semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D Pvag_2813 gabd3; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D Pvag_1415 ydcJ; Uncharacterized protein ydcJ K25986 ydcJ; 2-oxoadipate dioxygenase/decarboxylase [EC:1.13.11.93] D Pvag_1152 ydiJ; Uncharacterized protein ydiJ K26063 ydiJ; (R)-2-hydroxyglutarate dehydrogenase [EC:1.1.-.-] D Pvag_1888 aldH; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00220 Arginine biosynthesis [PATH:pva00220] D Pvag_3713 argI; ornithine carbamoyltransferase 1 K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D Pvag_3132 argG; Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D Pvag_3131 argH; Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D Pvag_0052 uaha1; UreA amidolyase-related protein K01941 uca; urea/guanidine carboxylase [EC:6.3.4.6 6.3.4.26] D Pvag_pPag30288 uahA; UreA amidolyase-related protein K01941 uca; urea/guanidine carboxylase [EC:6.3.4.6 6.3.4.26] D Pvag_0053 uaha3; amidase K01457 atzF; allophanate hydrolase [EC:3.5.1.54] D Pvag_pPag30181 yneH; putative glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D Pvag_3223 glnA; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Pvag_0085 carB; carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D Pvag_0084 carA; carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D Pvag_pPag30309 gdhA; glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D Pvag_0754 aspC; aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D Pvag_2108 yfbQ; putative aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D Pvag_2491 argA; amino-acid acetyltransferase K14682 argAB; amino-acid N-acetyltransferase [EC:2.3.1.1] D Pvag_3133 argB; Acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D Pvag_3134 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D Pvag_2922 argD; acetylornithine delta-aminotransferase / N-succinyldiaminopimelate aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D Pvag_3135 arge1; acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16] C 00330 Arginine and proline metabolism [PATH:pva00330] D Pvag_2928 codA; cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21] D Pvag_1874 hyuA; hydantoin utilization protein A K01473 hyuA; N-methylhydantoinase A [EC:3.5.2.14] D Pvag_1873 hyuB; hydantoin utilization protein B K01474 hyuB; N-methylhydantoinase B [EC:3.5.2.14] D Pvag_2552 speA; biosynthetic arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19] D Pvag_2551 speB; agmatinase K01480 speB; agmatinase [EC:3.5.3.11] D Pvag_2577 speF; ornithine decarboxylase isozyme K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D Pvag_0168 speE; Spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D Pvag_0167 speD; S-adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D Pvag_1888 aldH; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Pvag_2351 speG; spermidine N1-acetyltransferase K00657 speG; diamine N-acetyltransferase [EC:2.3.1.57] D Pvag_pPag20174 ami; amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D Pvag_1115 astA; arginine N-succinyltransferase K00673 astA; arginine N-succinyltransferase [EC:2.3.1.109] D Pvag_1117 astB; Succinylarginine dihydrolase K01484 astB; succinylarginine dihydrolase [EC:3.5.3.23] D Pvag_1114 astC; succinylornithine aminotransferase K00840 astC; succinylornithine aminotransferase [EC:2.6.1.81] D Pvag_1116 astD; succinylglutamic semialdehyde dehydrogenase K06447 astD; succinylglutamic semialdehyde dehydrogenase [EC:1.2.1.71] D Pvag_1118 astE; Succinylglutamate desuccinylase K05526 astE; succinylglutamate desuccinylase [EC:3.5.1.96] D Pvag_1945 ycjK; putative glutamine synthetase K09470 puuA; gamma-glutamylputrescine synthase [EC:6.3.1.11] D Pvag_1948 ordl3; probable oxidoreductase K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-] D Pvag_1946 ycjL; probable amidotransferase subunit K09473 puuD; gamma-glutamyl-gamma-aminobutyrate hydrolase [EC:3.5.1.94] D Pvag_0316 proC; Pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D Pvag_1746 putA; 1-pyrroline-5-carboxylate dehydrogenase / proline dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D Pvag_0282 proB; Glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D Pvag_0283 proA; gamma-glutamylphosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] D Pvag_0754 aspC; aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] C 00340 Histidine metabolism [PATH:pva00340] D Pvag_1951 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D Pvag_1958 hisI; Phosphoribosyl-AMP cyclohydrolase K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31] D Pvag_1956 hisA; N-(5'-phospho-L-ribosyl-formimino)-5-amino-1-(5'-phosphoribosyl)-4-imidazolecarboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] D Pvag_1955 hisH; amidotransferase K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D Pvag_1957 hisF; imidazole glycerol phosphate synthase subunit K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D Pvag_1954 hisB; histidinol-phosphatase / imidazoleglycerol-phosphate dehydratase K01089 hisB; imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase [EC:4.2.1.19 3.1.3.15] D Pvag_1953 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Pvag_0684 Uncharacterized protein K28842 E3.1.3.15; histidinol-phosphatase [EC:3.1.3.15] D Pvag_1952 hisD; Histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] D Pvag_0645 huth1; Histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3] D Pvag_0655 huth3; Histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3] D Pvag_0644 hutU; urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49] D Pvag_0649 hutI; imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7] D Pvag_0648 hutF; formiminoglutamate deiminase K05603 hutF; formimidoylglutamate deiminase [EC:3.5.3.13] D Pvag_0650 hutG; putative N-formylglutamate amidohydrolase K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68] D Pvag_1888 aldH; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Pvag_2394 gshA; gamma-glutamate-cysteine ligase K01919 gshA; glutamate---cysteine ligase [EC:6.3.2.2] C 00350 Tyrosine metabolism [PATH:pva00350] D Pvag_0754 aspC; aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D Pvag_1953 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Pvag_3525 tyrB; tyrosine aminotransferase, tyrosine repressible K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D Pvag_2032 adhc1; alcohol dehydrogenase class III K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D Pvag_1532 adhE; putative alcohol / acetaldehyde dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D Pvag_1623 adhP; alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D Pvag_0796 putative NAD-dependent aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D Pvag_1891 gabd1; succinic semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D Pvag_2813 gabd3; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00360 Phenylalanine metabolism [PATH:pva00360] D Pvag_0754 aspC; aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D Pvag_1953 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Pvag_3525 tyrB; tyrosine aminotransferase, tyrosine repressible K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D Pvag_2992 yhhy1; putative acetyltransferase K03825 aaaT; L-phenylalanine/L-methionine N-acetyltransferase [EC:2.3.1.53 2.3.1.-] D Pvag_3074 yhhy3; putative acetyltransferase K03825 aaaT; L-phenylalanine/L-methionine N-acetyltransferase [EC:2.3.1.53 2.3.1.-] D Pvag_1563 dadA; D-amino acid dehydrogenase subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] D Pvag_1925 katG; catalase/peroxidase K03782 katG; catalase-peroxidase [EC:1.11.1.21] D Pvag_pPag20174 ami; amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] C 00380 Tryptophan metabolism [PATH:pva00380] D Pvag_0549 sucB; 2-oxoglutarate dehydrogenase (dihydrolipoyltranssuccinase E2 component) K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D Pvag_0149 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Pvag_3442 fadB; enoyl-CoA hydratase / dodecenoyl-CoA delta-isomerase / 3-hydroxyacyl-CoA dehydrogenase / 3-hydroxybutyryl-CoA epimerase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D Pvag_2148 fadJ; fatty oxidation complex, alpha subunit K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D Pvag_1888 aldH; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Pvag_2180 ipdC; indolepyruvate decarboxylase K04103 ipdC; indolepyruvate decarboxylase [EC:4.1.1.74] D Pvag_pPag20175 nthA; putative nitrile hydratase alpha subunit K01721 nthA; nitrile hydratase subunit alpha [EC:4.2.1.84] D Pvag_pPag20176 nthB; putative nitrile hydratase beta subunit K20807 nthB; nitrile hydratase subunit beta [EC:4.2.1.84] D Pvag_pPag20174 ami; amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D Pvag_1204 katE; Catalase K03781 katE; catalase [EC:1.11.1.6] D Pvag_1925 katG; catalase/peroxidase K03782 katG; catalase-peroxidase [EC:1.11.1.21] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:pva00400] D Pvag_0575 aroG; phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D Pvag_1148 aroH; phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D Pvag_2384 aroF; phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D Pvag_2937 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D Pvag_2829 aroQ; putative class II dehydroquinase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D Pvag_2850 aroE; dehydroshikimate reductase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D Pvag_2273 quiA; quinate/shikimate dehydrogenase K05358 quiA; quinate dehydrogenase (quinone) [EC:1.1.5.8] D Pvag_0319 aroL; shikimate kinase II K00891 aroK; shikimate kinase [EC:2.7.1.71] D Pvag_2938 aroK; shikimate kinase I K00891 aroK; shikimate kinase [EC:2.7.1.71] D Pvag_0735 aroA; 5-enolpyruvylshikimate-3-phosphate synthetase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D Pvag_2143 aroC; Chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D Pvag_1504 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D Pvag_1505 trpG; anthranilate phosphoribosyltransferase / anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D Pvag_1506 trpD; anthranilate phosphoribosyltransferase / anthranilate synthase component II K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D Pvag_1507 trpC; Indole-3-glycerol phosphate synthase K13498 trpCF; indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase [EC:4.1.1.48 5.3.1.24] D Pvag_1509 trpA; tryptophan synthase, alpha protein K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D Pvag_1508 trpB; Tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D Pvag_2383 tyrA; chorismate mutase-T and prephenate dehydrogenase K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12] D Pvag_pPag10150 aroQ; chorismate mutase K04093 pheA1; chorismate mutase [EC:5.4.99.5] D Pvag_2382 pheA; chorismate mutase-P and prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51] D Pvag_2641 pheC; cyclohexadienyl dehydratase, putative K01713 pheC; cyclohexadienyl dehydratase [EC:4.2.1.51 4.2.1.91] D Pvag_0754 aspC; aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D Pvag_1953 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Pvag_3525 tyrB; tyrosine aminotransferase, tyrosine repressible K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:pva00410] D Pvag_0177 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D Pvag_pPag30456 gabT; 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D Pvag_1877 gabT; 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D Pvag_1888 aldH; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Pvag_0178 panC; pantoate:beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D Pvag_3442 fadB; enoyl-CoA hydratase / dodecenoyl-CoA delta-isomerase / 3-hydroxyacyl-CoA dehydrogenase / 3-hydroxybutyryl-CoA epimerase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D Pvag_2148 fadJ; fatty oxidation complex, alpha subunit K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D Pvag_3028 mmsA; Methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] C 00430 Taurine and hypotaurine metabolism [PATH:pva00430] D Pvag_2995 ggt3; gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D Pvag_3340 ggtA; putative gamma-glutamyltranspeptidase precursor K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D Pvag_2910 tauD; taurine dioxygenase, 2-oxoglutarate-dependent K03119 tauD; taurine dioxygenase [EC:1.14.11.17] D Pvag_2114 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D Pvag_2113 ackA; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] C 00440 Phosphonate and phosphinate metabolism [PATH:pva00440] D Pvag_1849 phnI; Protein phnI K06164 phnI; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI [EC:2.7.8.37] D Pvag_1851 phnG; Protein phnG K06166 phnG; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnG [EC:2.7.8.37] D Pvag_1850 phnH; Protein phnH K06165 phnH; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnH [EC:2.7.8.37] D Pvag_1846 phnL; Phosphonates transport ATP-binding protein phnL K05780 phnL; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnL [EC:2.7.8.37] D Pvag_1845 phnm1; phosphonate metabolism protein PhnM K06162 phnM; alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase [EC:3.6.1.63] D Pvag_1848 phnJ; Protein phnJ K06163 phnJ; alpha-D-ribose 1-methylphosphonate 5-phosphate C-P lyase [EC:4.7.1.1] D Pvag_1843 phnP; Protein phnP K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55] C 00450 Selenocompound metabolism [PATH:pva00450] D Pvag_3139 metB; cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D Pvag_2634 metC; beta-cystathionase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D Pvag_1710 patB; aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D Pvag_3492 metH; B12-dependent homocysteine-N5-methyltetrahydrofolate transmethylase, repressor of MetE and MetF K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D Pvag_3425 metE; tetrahydropteroyltriglutamate methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D Pvag_pPag30149 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D Pvag_0171 mdeA; methionine gamma-lyase K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11] D Pvag_1158 sufS; Iron-sulfur cluster biosynthesis protein sufS K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D Pvag_0722 trxB; Thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D Pvag_2448 cysN; ATP-sulfurylase, subunit 1 (ATP:sulfate adenylyltransferase) K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D Pvag_2449 cysD; ATP-sulfurylase, subunit 1 (ATP:sulfate adenylyltransferase) K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D Pvag_2746 selA; L-seryl-tRNA(Sec) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] D Pvag_2017 metG; Methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:pva00460] D Pvag_0622 bglX; beta-D-glucoside glucohydrolase, periplasmic K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Pvag_2995 ggt3; gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D Pvag_3340 ggtA; putative gamma-glutamyltranspeptidase precursor K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D Pvag_1548 ansA; cytoplasmic L-asparaginase I K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D Pvag_0675 ybiK; putative asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D Pvag_2298 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:pva00470] D Pvag_1562 dadX; alanine racemase 2, catabolic K01775 alr; alanine racemase [EC:5.1.1.1] D Pvag_0123 ddlB; D-alanine:D-alanine ligase B K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Pvag_2711 ddlA; D-alanine-D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Pvag_pPag30500 ygeA; putative aspartate/glutamate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10] D Pvag_pPag30181 yneH; putative glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D Pvag_3122 murI; Glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D Pvag_0119 murD; UDP-N-acetylmuramoylalanine-D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D Pvag_1052 hypothetical protein K26272 dgcN; D-glutamate N-acetyltransferase [EC:2.3.1.312] D Pvag_1053 ycjg1; putative muconate cycloisomerase I K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25] D Pvag_1449 ycjg3; putative muconate cycloisomerase I K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25] D Pvag_1754 yedO; putative 1-aminocyclopropane-1-carboxylate deaminase K05396 dcyD; D-cysteine desulfhydrase [EC:4.4.1.15] D Pvag_3404 dapF; Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D Pvag_2509 lysA; Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D Pvag_1563 dadA; D-amino acid dehydrogenase subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] C 00480 Glutathione metabolism [PATH:pva00480] D Pvag_2995 ggt3; gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D Pvag_3340 ggtA; putative gamma-glutamyltranspeptidase precursor K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D Pvag_1082 chaC; Cation transport protein chaC K07232 CHAC; glutathione-specific gamma-glutamylcyclotransferase [EC:4.3.2.7] D Pvag_0538 ybgL; UPF0271 protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9] D Pvag_0536 ybgJ; Uncharacterized protein ybgJ K23123 pxpB; 5-oxoprolinase (ATP-hydrolysing) subunit B [EC:3.5.2.9] D Pvag_0537 ybgK; Uncharacterized protein ybgK K23124 pxpC; 5-oxoprolinase (ATP-hydrolysing) subunit C [EC:3.5.2.9] D Pvag_2394 gshA; gamma-glutamate-cysteine ligase K01919 gshA; glutamate---cysteine ligase [EC:6.3.2.2] D Pvag_2561 gshB; glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3] D Pvag_3721 pepA; Leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D Pvag_2288 pepB; peptidase B K07751 pepB; PepB aminopeptidase [EC:3.4.11.23] D Pvag_0758 pepN; Aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D Pvag_0277 pepD; aminoacyl-histidine dipeptidase (peptidase D) K01270 pepD; dipeptidase D [EC:3.4.13.-] D Pvag_1228 gst; Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D Pvag_2116 yfcF; Uncharacterized GST-like protein yfcF K00799 GST; glutathione S-transferase [EC:2.5.1.18] D Pvag_3099 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D Pvag_3540 gstA; Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D Pvag_pPag30025 gstA; glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D Pvag_pPag30099 gst; Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D Pvag_3058 gor; glutathione oxidoreductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7] D Pvag_0940 icdA; isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D Pvag_1962 gnd; 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D Pvag_1655 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D Pvag_1143 btuE; ABC superfamily (binding protein), vitamine B12 transport protein K00432 gpx; glutathione peroxidase [EC:1.11.1.9] D Pvag_pPag30130 gpo; Glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9] D Pvag_3129 aHP1; putative peroxiredoxin/glutaredoxin family protein K24136 pgdX; glutathione-dependent peroxiredoxin [EC:1.11.1.27] D Pvag_2577 speF; ornithine decarboxylase isozyme K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D Pvag_0168 speE; Spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] B B 09107 Glycan biosynthesis and metabolism C 00520 Amino sugar and nucleotide sugar metabolism [PATH:pva00520] D Pvag_1188 ydhH; Anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170] D Pvag_2205 crr; PTS system, glucose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D Pvag_3552 yfeV; PTS system, IIBC component, putative K11192 murP; N-acetylmuramic acid PTS system EIICB component [EC:2.7.1.192] D Pvag_3551 yfeU; N-acetylmuramic acid 6-phosphate etherase K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126] D Pvag_0521 nagE; pts system, N-acetylglucosamine-specific IIABC component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193] D Pvag_3265 glmU; glucosamine-1-phosphate N-acetyltransferase / UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D Pvag_3385 wecB; UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D Pvag_3647 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Pvag_3452 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D Pvag_0909 ycfO; beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D Pvag_0619 bcc1; beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D Pvag_0519 nagA; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25] D Pvag_3579 hypothetical protein K18676 gspK; glucosamine kinase [EC:2.7.1.8] D Pvag_3673 glmM; glmM: phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D Pvag_0520 nagB; glucosamine-6-phosphate isomerase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6] D Pvag_3266 glmS; glucosamine--fructose-6-phosphate aminotransferase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Pvag_0326 yajF; Probable manno(fructo)kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D Pvag_pPag10156 rbsK; putative carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D Pvag_3498 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Pvag_1258 manA; mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D Pvag_1535 wcfX; putative nucleotide-diphosphate sugar epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D Pvag_0902 ptsG; PTS system, glucose-specific IIBC component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199] D Pvag_1476 malX; PTS system, maltose and glucose-specific II ABC K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D Pvag_2179 glk; Glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D Pvag_0529 pgm; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Pvag_1537 galU; glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Pvag_1973 galF; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Pvag_1536 ugd; putative nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D Pvag_0578 galK; Galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D Pvag_0579 galT; Galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] D Pvag_1972 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Pvag_1592 manX; PTS system, mannose-specific IIAB component K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191] D Pvag_1593 manY; Mannose permease IIC component K02795 manY; mannose PTS system EIIC component D Pvag_1594 manZ; Mannose permease IID component K02796 manZ; mannose PTS system EIID component D Pvag_2979 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D Pvag_1969 rfbA; TDP-glucose pyrophosphorylase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] C 00541 Biosynthesis of various nucleotide sugars [PATH:pva00541] D Pvag_3265 glmU; glucosamine-1-phosphate N-acetyltransferase / UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D Pvag_3639 yrbH; putative isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D Pvag_1078 kdsA; 2-dehydro-3-deoxyphosphooctulonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D Pvag_3638 yrbI; putative 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D Pvag_0744 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D Pvag_3385 wecB; UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D Pvag_3386 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336] D Pvag_0270 gmhA; phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D Pvag_0231 yaeD; putative phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D Pvag_2657 rfaE; ADP-heptose synthase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70] D Pvag_3181 rfaD; ADP-L-glycero-D-mannoheptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20] D Pvag_1537 galU; glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Pvag_1973 galF; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Pvag_1536 ugd; putative nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D Pvag_pPag10070 yfbG; Bifunctional polymyxin resistance protein arnA K10011 arnA; UDP-4-amino-4-deoxy-L-arabinose formyltransferase / UDP-glucuronic acid dehydrogenase (UDP-4-keto-hexauronic acid decarboxylating) [EC:2.1.2.13 1.1.1.305] D Pvag_pPag10072 yfbE; UDP-4-amino-4-deoxy-L-arabinose--oxoglutarateaminotransferase K07806 arnB; UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase [EC:2.6.1.87] D Pvag_pPag10071 yfbF; putative sugar transferase K10012 arnC; undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [EC:2.4.2.53] D Pvag_pPag10069 pmrJ; Uncharacterized protein yfbH K13014 arnD; undecaprenyl phosphate-alpha-L-ara4FN deformylase [EC:3.5.1.-] D Pvag_1969 rfbA; TDP-glucose pyrophosphorylase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D Pvag_1971 rfbB; dTDP-glucose 4,6 dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D Pvag_1968 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D Pvag_1970 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D Pvag_3389 wecE; TDP-4-keto-6-deoxy-D-glucose transaminase K02805 wecE; dTDP-4-amino-4,6-dideoxygalactose transaminase [EC:2.6.1.59] D Pvag_3388 wecD; Lipopolysaccharide biosynthesis protein K16704 rffC; dTDP-4-amino-4,6-dideoxy-D-galactose acyltransferase [EC:2.3.1.210] C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation [PATH:pva00511] D Pvag_0310 lacZ; beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D Pvag_0619 bcc1; beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] C 00540 Lipopolysaccharide biosynthesis [PATH:pva00540] D Pvag_0214 lpxA; UDP-N-acetylglucosamine acetyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D Pvag_0127 lpxC; UDP-3-O-acyl N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D Pvag_0212 lpxD; UDP-3-O-(3-hydroxymyristoyl)-glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D Pvag_0436 ybbF; UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D Pvag_0215 lpxB; Lipid-A-disaccharide synthetase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D Pvag_0741 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D Pvag_3190 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D Pvag_0857 htrB; lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D Pvag_1660 msbB; lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase K02560 lpxM; lauroyl-Kdo2-lipid IVA myristoyltransferase [EC:2.3.1.243] D Pvag_2049 yeiU; Inner membrane protein yeiU K19803 lpxT; Kdo2-lipid A phosphotransferase [EC:2.7.4.29] D Pvag_1734 yjdB; UPF0141 inner membrane protein yhjW K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43] D Pvag_3345 yhjW; UPF0141 inner membrane protein yhjW K12975 eptB; KDO II ethanolaminephosphotransferase [EC:2.7.8.42] D Pvag_pPag30356 crcA1; Protein crcA K12973 pagP; lipid IVA palmitoyltransferase [EC:2.3.1.251] D Pvag_pPag30521 crcA3; Protein crcA K12973 pagP; lipid IVA palmitoyltransferase [EC:2.3.1.251] D Pvag_pPag10068 yfbI; 4-amino-4-deoxy-L-arabinose transferase K07264 arnT; 4-amino-4-deoxy-L-arabinose transferase [EC:2.4.2.43] D Pvag_3205 ddg; Lipid A biosynthesis acyltransferase K12974 lpxP; KDO2-lipid IV(A) palmitoleoyltransferase [EC:2.3.1.242] D Pvag_3183 rfaC; lipopolysaccharide heptosyltransferase-1 K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23] D Pvag_3182 rfaf3; ADP-heptose--lps heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24] D Pvag_3188 rfaQ; putative lipopolysaccharide core biosynthesis protein K02849 waaQ; lipopolysaccharide heptosyltransferase III [EC:2.4.99.25] D Pvag_3187 yibD; putative glycosyltransferase K19354 waaH; heptose III glucuronosyltransferase [EC:2.4.1.-] D Pvag_3189 rfaG; probable glycosyltransferase K02844 waaG; UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-] D Pvag_2557 waaB; lipopolysaccharide 1,6-galactosyltransferase K02840 waaB; UDP-D-galactose:(glucosyl)LPS alpha-1,6-D-galactosyltransferase [EC:2.4.1.-] C 00542 O-Antigen repeat unit biosynthesis [PATH:pva00542] D Pvag_3383 wecA; putative undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 00550 Peptidoglycan biosynthesis [PATH:pva00550] D Pvag_3647 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Pvag_3452 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D Pvag_0122 murC; L-alanine adding enzyme, UDP-N-acetyl-muramate:alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D Pvag_0119 murD; UDP-N-acetylmuramoylalanine-D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D Pvag_0116 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D Pvag_0123 ddlB; D-alanine:D-alanine ligase B K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Pvag_2711 ddlA; D-alanine-D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Pvag_0117 murF; D-alanine:D-alanine-adding enzyme K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D Pvag_0207 yaeS; undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D Pvag_2662 bacA; undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D Pvag_0686 bcrC; Bacitracin transport permease protein BCRC K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D Pvag_0118 mraY; phospho-N-acetylmuramoyl-pentapeptidetransferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D Pvag_0121 murG; UDP-N-acetylglucosamine:N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D Pvag_3629 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; peptidoglycan glycosyltransferase [EC:2.4.99.28] D Pvag_2943 mrcA; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D Pvag_0187 mrcB; penicillin-binding protein 1b K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4] D Pvag_2284 pbpC; penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28] D Pvag_0120 ftsW; Cell division protein ftsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28] D Pvag_0489 mrdB; Rod shape-determining protein mrdB K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28] D Pvag_0490 mrda1; Penicillin-binding protein 2 (PBP-2) K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D Pvag_2600 mrda3; Penicillin-binding protein 2 (PBP-2) K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D Pvag_0115 ftsi1; division specific transpeptidase, penicillin-binding protein 3 re K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D Pvag_3703 ftsi3; Peptidoglycan synthetase ftsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D Pvag_0487 dacA; D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Pvag_0685 dacC; D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Pvag_1936 dacD; DD-carboxypeptidase, penicillin-binding protein 6B K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Pvag_3667 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] C 00552 Teichoic acid biosynthesis [PATH:pva00552] D Pvag_2662 bacA; undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D Pvag_0686 bcrC; Bacitracin transport permease protein BCRC K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D Pvag_3383 wecA; putative undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium D Pvag_3383 wecA; putative undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 00543 Exopolysaccharide biosynthesis [PATH:pva00543] D Pvag_1975 wceK; Extracellular polysaccharide biosynthesis glycosyl transferase wceK K16703 wcaL; colanic acid/amylovoran/stewartan biosynthesis glycosyltransferase WcaL/AmsK/CpsK [EC:2.4.-.-] D Pvag_1976 wceJ; Extracellular polysaccharide pyruvyl transferase wceJ K16710 wcaK; colanic acid/amylovoran biosynthesis protein WcaK/AmsJ D Pvag_3383 wecA; putative undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D Pvag_3393 wecG; probable UDP-N-acetyl-D-mannosaminuronic acid transferase K02852 wecG; UDP-N-acetyl-D-mannosaminouronate:lipid I N-acetyl-D-mannosaminouronosyltransferase [EC:2.4.1.180] D Pvag_3391 wecF; 4-alpha-L-fucosyltransferase wecF K12582 wecF; dTDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase [EC:2.4.1.325] D Pvag_3170 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D Pvag_1985 wceG; undecaprenyl-phosphategalactosephosphotransferase K16707 amsG; UDP-galactose-lipid carrier transferase D Pvag_1980 wceB; Extracellular polysaccharide biosynthesis glycosyltransferase wceB K16700 amsB; amylovoran/stewartan biosynthesis glycosyltransferase AmsB/CpsE [EC:2.4.-.-] D Pvag_1978 wceN; Extracellular polysaccharide biosynthesis protein wceN K25957 cpsG; stewartan biosynthesis glycosyltransferase CpsG D Pvag_1979 wceM; Extracellular polysaccharide biosynthesis glycosyltransferase wceM K25958 cpsF; stewartan biosynthesis galactosyltransferase CpsF B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:pva00730] D Pvag_3473 thiC; Thiamine biosynthesis protein ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17] D Pvag_2009 thiD; phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D Pvag_2289 yfhO; putative L-cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Pvag_0362 thiI; Thiamine biosynthesis protein thiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D Pvag_pPag30158 thiO; Putative thiamine biosynthesis oxidoreductase thiO K03153 thiO; glycine oxidase [EC:1.4.3.19] D Pvag_0359 dxs; 1-deoxyxylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D Pvag_pPag30160 thiG; Thiazole biosynthesis protein ThiG K03149 thiG; thiazole synthase [EC:2.8.1.10] D Pvag_2010 thiM; hydoxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50] D Pvag_3472 thiE; thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D Pvag_0356 thiL; thiamin-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16] D Pvag_2803 yjeQ; putative GTPase K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D Pvag_0908 ycfN; thiamine kinase K07251 thiK; thiamine kinase [EC:2.7.1.89] D Pvag_0416 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D Pvag_pPag30438 Thiamine biosynthesis protein THI22 precursor K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2] C 00740 Riboflavin metabolism [PATH:pva00740] D Pvag_1491 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D Pvag_0353 ribD; bifunctional pyrimidine deaminase/reductase in pathway of riboflavin synthesis K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D Pvag_0472 ybjI; Putative hydrolase K20861 ybjI; FMN hydrolase / 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.102 3.1.3.104] D Pvag_3407 yigB; Uncharacterized HAD-hydrolase K20862 yigB; FMN hydrolase / 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.102 3.1.3.104] D Pvag_2655 ribB; 3,4-dihydroxy-2-butanone 4-phosphate synthase K02858 ribB; 3,4-dihydroxy 2-butanone 4-phosphate synthase [EC:4.1.99.12] D Pvag_0354 ribH; riboflavin synthase, beta chain K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D Pvag_pPag30303 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D Pvag_1167 ribE; riboflavin synthase, alpha chain K00793 ribE; riboflavin synthase [EC:2.5.1.9] D Pvag_0076 ribF; putative regulator K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D Pvag_0342 phyK; putative 3-phytase precursor K01093 appA; 4-phytase / acid phosphatase [EC:3.1.3.26 3.1.3.2] D Pvag_3440 ubiB; FMN reductase K05368 fre; NAD(P)H-flavin reductase [EC:1.5.1.41] D Pvag_0763 ssuE; putative NAD(P)H-dependent FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38] D Pvag_pPag30453 nfsA; NADPH-flavin oxidoreductase K19286 nfrA2; FMN reductase [NAD(P)H] [EC:1.5.1.39] D Pvag_2010 thiM; hydoxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50] D Pvag_2649 nudf3; ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D Pvag_0938 ymfB; putative phosphohydrolase K12152 nudJ; phosphatase NudJ [EC:3.6.1.-] D Pvag_2122 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D Pvag_pPag30405 pad; putative flavoprotein K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00750 Vitamin B6 metabolism [PATH:pva00750] D Pvag_1225 pdxH; pyridoxinephosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5] D Pvag_pPag10131 Pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5] D Pvag_1227 pdxY; pyridoxal kinase 2 / pyridoxine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35] D Pvag_0585 ybhA; Phosphatase ybhA K28853 ybhA; pyridoxal phosphatase [EC:3.1.3.74] D Pvag_3420 yigL; Phosphatase yidA K28854 yigL; sugar-phosphatase / pyridoxal phosphatase [EC:3.1.3.23 3.1.3.74] D Pvag_pPag30519 ydbC; putative dehydrogenase K05275 E1.1.1.65; pyridoxine 4-dehydrogenase [EC:1.1.1.65] D Pvag_2546 epd; D-erythrose 4-phosphate dehydrogenase K03472 epd; D-erythrose 4-phosphate dehydrogenase [EC:1.2.1.72] D Pvag_2131 pdxB; erythronate-4-phosphate dehyrogenase K03473 pdxB; erythronate-4-phosphate dehydrogenase [EC:1.1.1.290] D Pvag_0734 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D Pvag_0092 pdxa1; 4-hydroxythreonine-4-phosphate dehydrogenase K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262] D Pvag_2312 pdxJ; Pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2] D Pvag_0064 thrC; Threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] C 00760 Nicotinate and nicotinamide metabolism [PATH:pva00760] D Pvag_2322 nadB; L-aspartate oxidase (Quinolinate synthetase B) K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D Pvag_0569 nadA; Quinolinate synthetase A K03517 nadA; quinolinate synthase [EC:2.5.1.72] D Pvag_0140 nadC; Nicotinate-nucleotide pyrophosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] D Pvag_0757 pncB; nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D Pvag_2601 deoD; purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1] D Pvag_0038 nadR; probable nadAB transcriptional regulator K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22] D Pvag_0420 ushA; UDP-sugar hydrolase (5'-nucleotidase) K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D Pvag_2440 surE; Survival protein surE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D Pvag_0517 nagD; nagD; putative phosphatase in N-acetylglucosamine metabolism K02566 nagD; 5'-nucleotidase [EC:3.1.3.5] D Pvag_0493 nadD; putative nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D Pvag_2460 mazG; Protein mazG K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D Pvag_3475 yjaD; NADH pyrophosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22] D Pvag_1122 nadE; NAD synthetase, prefers NH3 over glutamine K01916 nadE; NAD+ synthase [EC:6.3.1.5] D Pvag_2405 ygaD; CinA-like protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42] D Pvag_1549 ydjB; pyrazinamidase / nicotinamidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-] D Pvag_0926 cobB; putative nicotinic acid mononucleotide:5,6-dimethylbenzimidazole (DMB) phosphoribosyltransferase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313] D Pvag_2329 yfjB; NAD+ kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] D Pvag_3127 udhA; soluble pyridine nucleotide transhydrogenase K00322 sthA; NAD(P) transhydrogenase [EC:1.6.1.1] D Pvag_1423 pntA; pyridine nucleotide transhydrogenase, alpha subunit K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D Pvag_1422 pntB; NAD(P) transhydrogenase subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1] D Pvag_0796 putative NAD-dependent aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D Pvag_1891 gabd1; succinic semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D Pvag_2813 gabd3; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D Pvag_pPag30001 yneI; putative aldehyde dehydrogenase K08324 sad; succinate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.24] C 00770 Pantothenate and CoA biosynthesis [PATH:pva00770] D Pvag_0109 ilvI; acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Pvag_3111 ilvG; acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Pvag_pPag10120 alsS; acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Pvag_0110 ilvH; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D Pvag_3110 ilvM; acetolactate synthase isozyme II small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6] D Pvag_3105 ilvC; Ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D Pvag_3108 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D Pvag_0179 panB; 3-methyl-2-oxobutanoatehydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D Pvag_0364 apba1; 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D Pvag_1932 apba3; putative 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D Pvag_0178 panC; pantoate:beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D Pvag_3454 coaA; pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33] D Pvag_3197 coaBC; Coenzyme A biosynthesis bifunctional protein coaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D Pvag_2460 mazG; Protein mazG K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D Pvag_3192 coaD; Phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D Pvag_0135 coaE; Dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D Pvag_2311 acpS; holo-ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D Pvag_2066 entD; phosphopantetheinyl transferase entD K02362 entD; enterobactin synthetase component D / holo-[acyl-carrier protein] synthase [EC:6.3.2.14 2.7.8.7] D Pvag_3109 ilvE; branched-chain amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Pvag_0177 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D Pvag_1888 aldH; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00780 Biotin metabolism [PATH:pva00780] D Pvag_0591 bioC; Biotin synthesis protein bioC K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197] D Pvag_0844 fabF2; putative 3-oxoacyl-(acyl carrier protein) synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D Pvag_2137 fabB; 3-oxoacyl-ACP synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D Pvag_0847 fabF3; putative beta-ketoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D Pvag_0896 fabF; 3-oxoacyl ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D Pvag_pPag10107 fabF; 3-oxoacyl-acyl carrier protein synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D Pvag_0846 fabG2; putative beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Pvag_0894 fabg1; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Pvag_3686 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Pvag_0213 fabZ; (3R)-hydroxymyristol acyl carrier protein dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D Pvag_1471 fabI; enoyl-ACP-reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D Pvag_2958 bioH; Carboxylesterase bioH K02170 bioH; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85] D Pvag_0590 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D Pvag_0588 bioA; 7,8-diaminopelargonic acid synthetase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D Pvag_0592 bioD; Dethiobiotin synthetase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3] D Pvag_1384 ynfK; putative dethiobiotin synthetase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3] D Pvag_0589 bioB; biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6] D Pvag_3453 birA; Biotin-(acetyl-CoA carboxylase) ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D Pvag_1907 bisc1; probable molybdopterin oxidoreductase K08351 bisC; biotin/methionine sulfoxide reductase [EC:1.-.-.-] D Pvag_3702 bisc3; putative biotin sulfoxide reductas2 K08351 bisC; biotin/methionine sulfoxide reductase [EC:1.-.-.-] D Pvag_pPag30198 bisC; oxidoreductase, molybdopterin-binding protein K08351 bisC; biotin/methionine sulfoxide reductase [EC:1.-.-.-] C 00785 Lipoic acid metabolism [PATH:pva00785] D Pvag_0485 lipB; Lipoate-protein ligase B K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181] D Pvag_0484 lipA; lipoic acid synthetase K03644 lipA; lipoyl synthase [EC:2.8.1.8] D Pvag_pPag30250 lplA; Lipoate-protein ligase A K03800 lplA; lipoate---protein ligase [EC:6.3.1.20] D Pvag_0149 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Pvag_0147 aceE; pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D Pvag_0148 aceF; pyruvate dehydrogenase (dihydrolipoyltransacetylase component) K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D Pvag_0548 sucA; 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D Pvag_0549 sucB; 2-oxoglutarate dehydrogenase (dihydrolipoyltranssuccinase E2 component) K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D Pvag_2527 gcvP; glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D Pvag_2529 gcvT; aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D Pvag_2528 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:pva00790] D Pvag_2029 folE; GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16] D Pvag_1670 ntpA; putative dATP pyrophosphohydrolase K08310 nudB; dihydroneopterin triphosphate diphosphatase [EC:3.6.1.67] D Pvag_2663 folB; Dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D Pvag_0180 folK; 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D Pvag_3672 folP; 7,8-dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D Pvag_0087 folA; dihydrofolate reductase type I K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D Pvag_2125 folC; Folylpolyglutamate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D Pvag_1491 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D Pvag_2923 pabA; para-aminobenzoate synthase glutamine amidotransferase, component II K01664 pabA; para-aminobenzoate synthetase component II [EC:2.6.1.85] D Pvag_1585 pabB; para-aminobenzoate synthase component I K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85] D Pvag_0897 pabC; 4-amino-4-deoxychorismate lyase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38] D Pvag_2456 ygcM; putative 6-pyruvoyl tetrahydrobiopterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D Pvag_2457 ygcF; Uncharacterized protein ygcF K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D Pvag_0384 ybaX; Queuosine biosynthesis protein queC 2 K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D Pvag_2475 yqcD; NADPH-dependent 7-cyano-7-deazaguanine reductase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D Pvag_0597 moaA; Molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D Pvag_0599 moaC; Molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D Pvag_0601 moaE; Molybdopterin-converting factor subunit 2 K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D Pvag_0068 mog; Molybdopterin biosynthesis mog protein K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75] D Pvag_0598 moaB; Molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75] D Pvag_0674 moeA; Molybdopterin biosynthesis protein moeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D Pvag_pPag30475 Purine catabolism protein pucB K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76] D Pvag_3233 mobA; Probable molybdopterin-guanine dinucleotide biosynthesis protein A K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77] C 00670 One carbon pool by folate [PATH:pva00670] D Pvag_0087 folA; dihydrofolate reductase type I K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D Pvag_0441 folD; 5,10-methylene-tetrahydrofolate dehydrogenase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D Pvag_2298 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Pvag_2254 purN; phosphoribosylglycinamide formyltransferase 1 K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D Pvag_3482 purH; phosphoribosylaminoimidazolecarboxamideformyltra nsferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D Pvag_2529 gcvT; aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D Pvag_3492 metH; B12-dependent homocysteine-N5-methyltetrahydrofolate transmethylase, repressor of MetE and MetF K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D Pvag_2500 thyA; thymidylate synthetase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D Pvag_1540 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D Pvag_3137 metF; 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D Pvag_2535 ygfa1; Uncharacterized protein K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] D Pvag_2353 mmuM; homocysteine S-methyltransferase K00547 mmuM; homocysteine S-methyltransferase [EC:2.1.1.10] D Pvag_2553 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D Pvag_2527 gcvP; glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D Pvag_0149 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Pvag_2528 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D Pvag_1616 betA; choline dehydrogenase K00108 betA; choline dehydrogenase [EC:1.1.99.1] D Pvag_1615 betB; betaine aldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:pva00860] D Pvag_2189 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Pvag_1073 hemA; Glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70] D Pvag_0191 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D Pvag_3037 hemB; 5-aminolevulinate dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D Pvag_3401 hemC; Porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D Pvag_3400 hemD; uroporphyrinogen III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75] D Pvag_3476 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] D Pvag_2217 hemF; Coproporphyrinogen III oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3] D Pvag_3226 hemN; O2-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3] D Pvag_3446 hemG; protoporphyrinogen oxidase K00230 hemG; menaquinone-dependent protoporphyrinogen oxidase [EC:1.3.5.3] D Pvag_0417 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] D Pvag_3399 hemX; uroporphyrinogen III methylase K02496 hemX; uroporphyrin-III C-methyltransferase [EC:2.1.1.107] D Pvag_2450 cysg1; uroporphyrin-III C-methyltransferase / precorrin-2 oxidase / ferrochelatase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4] D Pvag_2931 cysg3; siroheme synthase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4] D Pvag_1097 nirE; uroporphyrin-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107] D Pvag_0367 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D Pvag_1499 btuR; cob(I)alamin adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D Pvag_2892 bfr; Bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:pva00130] D Pvag_3510 ubiC; chorismate lyase K03181 ubiC; chorismate lyase [EC:4.1.3.40] D Pvag_3511 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D Pvag_3439 yigC; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98] D Pvag_2122 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D Pvag_pPag30405 pad; putative flavoprotein K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D Pvag_2530 visC; hypothetical protein K18800 ubiI; 2-polyprenylphenol 6-hydroxylase [EC:1.14.13.240] D Pvag_3690 yhbU; putative collagenase K24844 ubiU; 2-(all-trans-polyprenyl)phenol 6-hydroxylase (prephenate) UbiU [EC:1.97.1.15] D Pvag_3689 yhbV; Uncharacterized protein yhbV K24845 ubiV; 2-(all-trans-polyprenyl)phenol 6-hydroxylase (prephenate) UbiV [EC:1.97.1.15] D Pvag_3691 yhbT; Uncharacterized protein yhbT K24843 ubiT; 2-(all-trans-polyprenyl)phenol 6-hydroxylase (prephenate) accessory factor UbiT D Pvag_2086 ubiG; 3-demethylubiquinone-9 3-methyltransferase and 2-octaprenyl-6-hydroxy phenol methylase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64] D Pvag_2531 ubiH; 2-octaprenyl-6-methoxyphenol--> 2-octaprenyl-6-methoxy-1,4-benzoquinone K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-] D Pvag_3430 ubiE; ubiquinone/menaquinone biosynthesis methyltransferase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D Pvag_0508 yleB; 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinolhydroxylase K03184 ubiF; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60] D Pvag_3657 entC; isochorismate synthase EntC K02361 entC; isochorismate synthase [EC:5.4.4.2] D Pvag_3653 ybdB; UPF0152 protein K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28] D Pvag_pPag30204 probable NAD(P)H dehydrogenase (quinone) K00355 NQO1; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D Pvag_0798 wrbA; Flavoprotein wrbA K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D Pvag_2593 ytfG; Uncharacterized protein K19267 qorB; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:pva00900] D Pvag_0359 dxs; 1-deoxyxylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D Pvag_0206 dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D Pvag_2444 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] D Pvag_1071 ispE; isopentenyl monophosphate kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D Pvag_2443 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] D Pvag_2279 ispG; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D Pvag_0080 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D Pvag_2122 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D Pvag_pPag30405 pad; putative flavoprotein K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D Pvag_0631 mvaD; isopentenyl-diphosphate delta-isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2] D Pvag_0360 ispA; geranyltranstransferase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] D Pvag_pPag30175 crtE; geranyltranstransferase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D Pvag_3649 ispB; octaprenyl diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D Pvag_0207 yaeS; undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis [PATH:pva00906] D Pvag_pPag30171 crtB; prephytoene pyrophosphate synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32] D Pvag_pPag30172 crtI; phytoene dehydrogenase K10027 crtI; phytoene desaturase [EC:1.3.99.26 1.3.99.28 1.3.99.29 1.3.99.31] D Pvag_pPag30173 crtY; Lycopene beta cyclase precursor K06443 lcyB; lycopene beta-cyclase [EC:5.5.1.19] D Pvag_pPag30170 crtZ; Beta-carotene hydroxylase K15746 crtZ; beta-carotene 3-hydroxylase [EC:1.14.15.24] D Pvag_pPag30174 crtX; Zeaxanthin Glucosyl Transferase K14596 crtX; zeaxanthin glucosyltransferase [EC:2.4.1.276] C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation D Pvag_1888 aldH; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00907 Pinene, camphor and geraniol degradation [PATH:pva00907] D Pvag_3442 fadB; enoyl-CoA hydratase / dodecenoyl-CoA delta-isomerase / 3-hydroxyacyl-CoA dehydrogenase / 3-hydroxybutyryl-CoA epimerase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D Pvag_2148 fadJ; fatty oxidation complex, alpha subunit K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D Pvag_pPag10027 yjgB; Alcohol dehydrogenase K12957 ahr; alcohol/geraniol dehydrogenase (NADP+) [EC:1.1.1.2 1.1.1.183] D Pvag_2149 fadI; Fatty acid oxidation complex, beta subunit K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D Pvag_3441 fadA; small (beta) subunit of the fatty acid-oxidizing multienzyme complex K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D Pvag_1004 tktB; putative N-terminal region of transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Pvag_1005 tkt1; C-terminal region of transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Pvag_2219 tktA; Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Pvag_2548 tkt3; Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Pvag_pPag30527 transketolase-like protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Pvag_pPag30528 putative transketolase beta subunit protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis [PATH:pva00523] D Pvag_1969 rfbA; TDP-glucose pyrophosphorylase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D Pvag_1971 rfbB; dTDP-glucose 4,6 dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D Pvag_1968 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D Pvag_1970 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides [PATH:pva01053] D Pvag_3657 entC; isochorismate synthase EntC K02361 entC; isochorismate synthase [EC:5.4.4.2] D Pvag_3655 entB; isochorismatase K01252 entB; bifunctional isochorismate lyase / aryl carrier protein [EC:3.3.2.1 6.3.2.14] D Pvag_3654 entA; 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase K00216 entA; 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase [EC:1.3.1.28] D Pvag_2066 entD; phosphopantetheinyl transferase entD K02362 entD; enterobactin synthetase component D / holo-[acyl-carrier protein] synthase [EC:6.3.2.14 2.7.8.7] D Pvag_3656 entE; 2,3-dihydroxybenzoate-AMP ligase K02363 entE; 2,3-dihydroxybenzoate---[aryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.71] D Pvag_3663 entF; enterobactin synthetase component F K02364 entF; L-serine---[L-seryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.72] C 01055 Biosynthesis of vancomycin group antibiotics D Pvag_1971 rfbB; dTDP-glucose 4,6 dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids [PATH:pva00946] D Pvag_0622 bglX; beta-D-glucoside glucohydrolase, periplasmic K05349 bglX; beta-glucosidase [EC:3.2.1.21] C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis D Pvag_pPag30396 bla; beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6] C 00332 Carbapenem biosynthesis [PATH:pva00332] D Pvag_0282 proB; Glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D Pvag_0283 proA; gamma-glutamylphosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00261 Monobactam biosynthesis [PATH:pva00261] D Pvag_2448 cysN; ATP-sulfurylase, subunit 1 (ATP:sulfate adenylyltransferase) K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D Pvag_2449 cysD; ATP-sulfurylase, subunit 1 (ATP:sulfate adenylyltransferase) K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D Pvag_3499 lysC; aspartate kinase III K00928 lysC; aspartate kinase [EC:2.7.2.4] D Pvag_0062 thrA; bifunctional aspartokinase/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D Pvag_3138 metL; aspartokinase II/homoserine dehydrogenase, methionine-sensitive K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3] D Pvag_2982 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Pvag_0159 dapa1; putative dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D Pvag_1307 dapa3; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D Pvag_2236 dapa5; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D Pvag_0082 dapB; Dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:pva00521] D Pvag_2179 glk; Glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D Pvag_0529 pgm; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Pvag_0343 putative inositol monophosphatase protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D Pvag_1355 putative inositol monophosphatase protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D Pvag_2292 suhB; SuhB K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D Pvag_3022 iolG; myo-inositol 2-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369] D Pvag_pPag10076 idhA; myo-inositol 2-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369] D Pvag_pPag10103 oxidoreductase, NAD-binding protein K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369] D Pvag_pPag30219 iolG; Putative myo-inositol 2-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369] D Pvag_1969 rfbA; TDP-glucose pyrophosphorylase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D Pvag_1971 rfbB; dTDP-glucose 4,6 dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D Pvag_1968 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D Pvag_1970 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 00524 Neomycin, kanamycin and gentamicin biosynthesis D Pvag_2179 glk; Glucokinase K00845 glk; glucokinase [EC:2.7.1.2] C 00525 Acarbose and validamycin biosynthesis [PATH:pva00525] D Pvag_1969 rfbA; TDP-glucose pyrophosphorylase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D Pvag_1971 rfbB; dTDP-glucose 4,6 dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis [PATH:pva00401] D Pvag_2383 tyrA; chorismate mutase-T and prephenate dehydrogenase K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12] D Pvag_0754 aspC; aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D Pvag_1953 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Pvag_3525 tyrB; tyrosine aminotransferase, tyrosine repressible K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis D Pvag_1504 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D Pvag_1505 trpG; anthranilate phosphoribosyltransferase / anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis D Pvag_0893 fabD; malonyl-CoA-[acyl-carrier-protein] transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D Pvag_0846 fabG2; putative beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Pvag_0894 fabg1; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Pvag_3686 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Pvag_1471 fabI; enoyl-ACP-reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] C 00254 Aflatoxin biosynthesis C 00975 Biosynthesis of various siderophores [PATH:pva00975] D Pvag_pPag30339 dfoJ; putative pyridoxal-dependent decarboxylase K28682 desA; lysine decarboxylase [EC:4.1.1.18] D Pvag_pPag30340 dfoA; putative lysine/ornithine N-monooxygenase K27501 alcA; putrescine/cadaverine/1,3-diaminopropane N-hydroxylase [EC:1.14.13.252 1.14.13.-] D Pvag_pPag30242 dat; diaminobutyrate--2-oxoglutarateaminotransferase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76] D Pvag_pPag30241 ddc; L-2,4-diaminobutyrate decarboxylase K13745 ddc; L-2,4-diaminobutyrate decarboxylase [EC:4.1.1.86] D Pvag_pPag20157 cbs; pyridoxal-phosphate dependent enzyme family/ornithine cyclodeaminase family protein K21949 sbnA; N-(2-amino-2-carboxyethyl)-L-glutamate synthase [EC:2.5.1.140] C 00998 Biosynthesis of various antibiotics [PATH:pva00998] D Pvag_0834 putative acyl carrier protein K02078 acpP; acyl carrier protein D Pvag_0835 Acyl carrier protein (ACP) K02078 acpP; acyl carrier protein D Pvag_0895 acpP; Acyl carrier protein (ACP) K02078 acpP; acyl carrier protein D Pvag_pPag20157 cbs; pyridoxal-phosphate dependent enzyme family/ornithine cyclodeaminase family protein K21949 sbnA; N-(2-amino-2-carboxyethyl)-L-glutamate synthase [EC:2.5.1.140] D Pvag_pPag20164 hypothetical protein K22113 ddaG; fumarate---(S)-2,3-diaminopropanoate ligase [EC:6.3.2.46] D Pvag_pPag20165 asnB; asparagine synthetase K01957 ddaH; N-3-fumaroyl-(S)-2,3-diaminopropanoate amidotransferase [EC:6.3.5.-] D Pvag_pPag20162 hypothetical protein K22114 ddaF; dapdiamide synthase [EC:6.3.2.47] D Pvag_pPag20163 hypothetical protein K22114 ddaF; dapdiamide synthase [EC:6.3.2.47] C 00999 Biosynthesis of various plant secondary metabolites [PATH:pva00999] D Pvag_2553 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D Pvag_2850 aroE; dehydroshikimate reductase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D Pvag_0622 bglX; beta-D-glucoside glucohydrolase, periplasmic K05349 bglX; beta-glucosidase [EC:3.2.1.21] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:pva00362] D Pvag_2149 fadI; Fatty acid oxidation complex, beta subunit K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D Pvag_3441 fadA; small (beta) subunit of the fatty acid-oxidizing multienzyme complex K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D Pvag_1684 pcaC; hypothetical protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44] D Pvag_pPag30509 pcaC; 4-carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44] D Pvag_2148 fadJ; fatty oxidation complex, alpha subunit K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D Pvag_3442 fadB; enoyl-CoA hydratase / dodecenoyl-CoA delta-isomerase / 3-hydroxyacyl-CoA dehydrogenase / 3-hydroxybutyryl-CoA epimerase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] C 00627 Aminobenzoate degradation [PATH:pva00627] D Pvag_pPag20175 nthA; putative nitrile hydratase alpha subunit K01721 nthA; nitrile hydratase subunit alpha [EC:4.2.1.84] D Pvag_pPag20176 nthB; putative nitrile hydratase beta subunit K20807 nthB; nitrile hydratase subunit beta [EC:4.2.1.84] D Pvag_pPag20174 ami; amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D Pvag_0790 yccX; Probable acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D Pvag_pPag30406 vdcC; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K01612 bsdC; vanillate/4-hydroxybenzoate decarboxylase subunit C [EC:4.1.1.- 4.1.1.61] D Pvag_pPag30407 hypothetical protein K21759 bsdD; vanillate/4-hydroxybenzoate decarboxylase subunit D [EC:4.1.1.- 4.1.1.61] D Pvag_2122 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D Pvag_pPag30405 pad; putative flavoprotein K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00364 Fluorobenzoate degradation [PATH:pva00364] D Pvag_3426 dlhH; putative dienelactone hydrolase family K01061 clcD; carboxymethylenebutenolidase [EC:3.1.1.45] D Pvag_pPag20175 nthA; putative nitrile hydratase alpha subunit K01721 nthA; nitrile hydratase subunit alpha [EC:4.2.1.84] D Pvag_pPag20176 nthB; putative nitrile hydratase beta subunit K20807 nthB; nitrile hydratase subunit beta [EC:4.2.1.84] C 00625 Chloroalkane and chloroalkene degradation [PATH:pva00625] D Pvag_1623 adhP; alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D Pvag_2032 adhc1; alcohol dehydrogenase class III K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D Pvag_1532 adhE; putative alcohol / acetaldehyde dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D Pvag_1888 aldH; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Pvag_pPag10062 adhC; putative alcohol dehydrogenase K00148 fdhA; glutathione-independent formaldehyde dehydrogenase [EC:1.2.1.46] D Pvag_pPag20079 Abhydrolase domain-containing protein 7 K01561 dehH; haloacetate dehalogenase [EC:3.8.1.3] D Pvag_pPag30364 GCN5-related N-acetyltransferase K01561 dehH; haloacetate dehalogenase [EC:3.8.1.3] D Pvag_1887 hadL; haloacid dehalogenase, type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] D Pvag_pPag10064 chd1; haloacid dehalogenase, type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:pva00361] D Pvag_3426 dlhH; putative dienelactone hydrolase family K01061 clcD; carboxymethylenebutenolidase [EC:3.1.1.45] D Pvag_1887 hadL; haloacid dehalogenase, type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] D Pvag_pPag10064 chd1; haloacid dehalogenase, type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] D Pvag_pPag20079 Abhydrolase domain-containing protein 7 K01561 dehH; haloacetate dehalogenase [EC:3.8.1.3] D Pvag_pPag30364 GCN5-related N-acetyltransferase K01561 dehH; haloacetate dehalogenase [EC:3.8.1.3] C 00623 Toluene degradation [PATH:pva00623] D Pvag_3426 dlhH; putative dienelactone hydrolase family K01061 clcD; carboxymethylenebutenolidase [EC:3.1.1.45] C 00622 Xylene degradation C 00633 Nitrotoluene degradation [PATH:pva00633] D Pvag_0693 mdaA; modulator of drug activity A K10678 nfsA; nitroreductase [EC:1.-.-.-] D Pvag_1177 nemA; N-ethylmaleimide reductase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-] D Pvag_pPag30156 nemA; oxidoreductase, FAD/FMN-binding protein K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-] C 00642 Ethylbenzene degradation D Pvag_2149 fadI; Fatty acid oxidation complex, beta subunit K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D Pvag_3441 fadA; small (beta) subunit of the fatty acid-oxidizing multienzyme complex K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 00643 Styrene degradation [PATH:pva00643] D Pvag_pPag20175 nthA; putative nitrile hydratase alpha subunit K01721 nthA; nitrile hydratase subunit alpha [EC:4.2.1.84] D Pvag_pPag20176 nthB; putative nitrile hydratase beta subunit K20807 nthB; nitrile hydratase subunit beta [EC:4.2.1.84] D Pvag_pPag20174 ami; amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] C 00791 Atrazine degradation [PATH:pva00791] D Pvag_0053 uaha3; amidase K01457 atzF; allophanate hydrolase [EC:3.5.1.54] D Pvag_1866 Uncharacterized isochorismatase family protein K23359 biuH; biuret amidohydrolase [EC:3.5.1.84] D Pvag_0052 uaha1; UreA amidolyase-related protein K01941 uca; urea/guanidine carboxylase [EC:6.3.4.6 6.3.4.26] D Pvag_pPag30288 uahA; UreA amidolyase-related protein K01941 uca; urea/guanidine carboxylase [EC:6.3.4.6 6.3.4.26] D Pvag_pPag30290 Uncharacterized protein ycgI K28692 cgdA; carboxyguanidine deiminase [EC:3.5.1.140] D Pvag_pPag30289 hypothetical protein K28693 cgdB; carboxyguanidine deiminase [EC:3.5.1.140] C 00930 Caprolactam degradation [PATH:pva00930] D Pvag_pPag30009 Putative amidotransferase of ThiH/PfpI family K18199 inhA; cyclohexyl-isocyanide hydratase [EC:4.2.1.103] D Pvag_pPag30408 hypothetical protein K01053 gnl; gluconolactonase [EC:3.1.1.17] D Pvag_3442 fadB; enoyl-CoA hydratase / dodecenoyl-CoA delta-isomerase / 3-hydroxyacyl-CoA dehydrogenase / 3-hydroxybutyryl-CoA epimerase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D Pvag_2148 fadJ; fatty oxidation complex, alpha subunit K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] C 00363 Bisphenol degradation C 00621 Dioxin degradation C 00626 Naphthalene degradation [PATH:pva00626] D Pvag_1623 adhP; alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D Pvag_2032 adhc1; alcohol dehydrogenase class III K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D Pvag_1532 adhE; putative alcohol / acetaldehyde dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation [PATH:pva00984] D Pvag_2149 fadI; Fatty acid oxidation complex, beta subunit K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D Pvag_3441 fadA; small (beta) subunit of the fatty acid-oxidizing multienzyme complex K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:pva03020] D Pvag_3467 rpoB; DNA-directed RNA polymerase beta chain K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D Pvag_3468 rpoC; DNA-directed RNA polymerase beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D Pvag_2863 rpoA; DNA-directed RNA polymerase alpha chain K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D Pvag_3212 rpoZ; DNA-directed RNA polymerase omega chain K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:pva03010] D Pvag_0232 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Pvag_2376 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Pvag_2846 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Pvag_3121 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Pvag_3237 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Pvag_3447 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Pvag_3483 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Pvag_0234 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Pvag_2373 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Pvag_2844 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Pvag_3118 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Pvag_3235 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Pvag_3450 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Pvag_3485 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Pvag_0235 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Pvag_2372 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Pvag_2841 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Pvag_2843 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Pvag_3117 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Pvag_3234 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Pvag_3451 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Pvag_3486 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Pvag_0737 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D Pvag_0202 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D Pvag_2883 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D Pvag_2864 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D Pvag_2871 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D Pvag_2778 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D Pvag_2897 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D Pvag_2874 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D Pvag_3623 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D Pvag_2890 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D Pvag_2865 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D Pvag_2898 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D Pvag_2866 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D Pvag_2875 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D Pvag_3682 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D Pvag_2389 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D Pvag_2880 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D Pvag_2776 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D Pvag_2885 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D Pvag_0075 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D Pvag_2666 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D Pvag_3464 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D Pvag_2886 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D Pvag_2889 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D Pvag_2888 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D Pvag_2876 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D Pvag_2873 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D Pvag_2775 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D Pvag_3465 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D Pvag_3463 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D Pvag_3466 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D Pvag_3622 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D Pvag_2878 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D Pvag_2869 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D Pvag_2882 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D Pvag_2862 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D Pvag_2872 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D Pvag_2386 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D Pvag_1138 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D Pvag_3650 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D Pvag_2884 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D Pvag_2887 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D Pvag_2877 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D Pvag_2060 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D Pvag_3651 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D Pvag_3195 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D Pvag_2881 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D Pvag_2870 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D Pvag_0402 ykgM; putative ribosomal protein K02909 RP-L31; large subunit ribosomal protein L31 D Pvag_3143 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D Pvag_0890 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D Pvag_3194 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D Pvag_3310 rpmH; 50S ribosomal subunit protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D Pvag_1137 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D Pvag_0401 rpmj1; putative 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D Pvag_2867 rpmj3; 50S ribosomal subunit protein L36 K02919 RP-L36; large subunit ribosomal protein L36 C 00970 Aminoacyl-tRNA biosynthesis [PATH:pva00970] D Pvag_2185 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Pvag_2186 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Pvag_2374 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Pvag_3119 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Pvag_3449 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Pvag_0443 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Pvag_2163 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Pvag_2397 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Pvag_2398 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Pvag_2399 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Pvag_3394 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Pvag_1816 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Pvag_1897 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Pvag_1918 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Pvag_0236 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Pvag_0244 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Pvag_3116 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Pvag_0817 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D Pvag_0509 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Pvag_0510 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Pvag_0512 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Pvag_0513 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Pvag_0233 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Pvag_2845 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Pvag_3236 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Pvag_3484 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Pvag_0816 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Pvag_2799 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Pvag_2800 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Pvag_2801 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Pvag_3458 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Pvag_3395 tRNA-His K14226 tRNA-His; tRNA His D Pvag_2375 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Pvag_3120 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Pvag_3448 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Pvag_0028 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Pvag_0029 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Pvag_0030 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Pvag_0514 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Pvag_0818 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Pvag_3396 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Pvag_3675 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Pvag_3753 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Pvag_0563 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Pvag_0564 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Pvag_0565 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Pvag_2193 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Pvag_0511 tRNA-Met K14230 tRNA-Met; tRNA Met D Pvag_0515 tRNA-Met K14230 tRNA-Met; tRNA Met D Pvag_2486 tRNA-Met K14230 tRNA-Met; tRNA Met D Pvag_2487 tRNA-Met K14230 tRNA-Met; tRNA Met D Pvag_2488 tRNA-Met K14230 tRNA-Met; tRNA Met D Pvag_2672 tRNA-Met K14230 tRNA-Met; tRNA Met D Pvag_3676 tRNA-Met K14230 tRNA-Met; tRNA Met D Pvag_2598 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D Pvag_3603 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D Pvag_2064 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Pvag_3346 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Pvag_3397 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Pvag_0793 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Pvag_0794 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Pvag_1740 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Pvag_2400 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Pvag_0289 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Pvag_2842 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Pvag_3456 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Pvag_3459 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Pvag_3115 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D Pvag_1541 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D Pvag_1542 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D Pvag_3457 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D Pvag_1163 tRNA-Val K14237 tRNA-Val; tRNA Val D Pvag_1164 tRNA-Val K14237 tRNA-Val; tRNA Val D Pvag_1165 tRNA-Val K14237 tRNA-Val; tRNA Val D Pvag_2190 tRNA-Val K14237 tRNA-Val; tRNA Val D Pvag_2191 tRNA-Val K14237 tRNA-Val; tRNA Val D Pvag_2192 tRNA-Val K14237 tRNA-Val; tRNA Val D Pvag_2189 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Pvag_1868 gata3; amidase family protein K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D Pvag_pPag30085 amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D Pvag_0522 glnS; glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D Pvag_2402 alaS; Alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Pvag_1671 aspS; Aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Pvag_0756 asnS; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D Pvag_3321 glyQ; glycine tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D Pvag_3322 glyS; Glycyl-tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D Pvag_1135 thrS; Threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D Pvag_0728 serS; Seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D Pvag_2746 selA; L-seryl-tRNA(Sec) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] D Pvag_0438 cysS; Cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D Pvag_2017 metG; Methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Pvag_2856 fmt; Methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D Pvag_3719 valS; Valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D Pvag_0496 leuS; Leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Pvag_0077 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D Pvag_2514 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D Pvag_1712 argS; Arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Pvag_0225 proS; Prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D Pvag_2278 hisS; Histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D Pvag_1139 pheS; phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D Pvag_1140 pheT; phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D Pvag_1226 tyrS; Tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Pvag_2932 trpS; Tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes [PATH:pva03008] D Pvag_2315 rnc; RNase III, ds RNA K03685 rnc; ribonuclease III [EC:3.1.26.3] D Pvag_2802 yjeR; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D Pvag_2344 rIO1; RIO-type serine/threonine protein kinase K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1] B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:pva03060] D Pvag_2868 secY; Preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D Pvag_3461 secE; Preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D Pvag_3674 secG; Protein-export membrane protein secG K03075 secG; preprotein translocase subunit SecG D Pvag_0348 secD; Protein-export membrane protein secD K03072 secD; preprotein translocase subunit SecD D Pvag_0349 secF; Protein-export membrane protein secF K03074 secF; preprotein translocase subunit SecF D Pvag_0347 yajC; UPF0092 membrane protein yajC K03210 yajC; preprotein translocase subunit YajC D Pvag_3313 yidC; Inner membrane protein yidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D Pvag_0130 secA; Preprotein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Pvag_3172 secB; Protein-export protein secB K03071 secB; preprotein translocase subunit SecB D Pvag_0129 secM; Secretion monitor precursor K13301 secM; secretion monitor D Pvag_2390 ffh; Signal recognition 54 kDa protein (SRP54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D Pvag_3011 ftsY; Cell division protein ftsY K03110 ftsY; fused signal recognition particle receptor D Pvag_3433 tatA; Sec-independent protein translocase protein tatA/E K03116 tatA; sec-independent protein translocase protein TatA D Pvag_3434 tatB; Sec-independent protein translocase protein tatB K03117 tatB; sec-independent protein translocase protein TatB D Pvag_3435 tatC; Sec-independent protein translocase protein tatC K03118 tatC; sec-independent protein translocase protein TatC D Pvag_0483 ybeC; Sec-independent protein translocase protein tatA/E K03425 tatE; sec-independent protein translocase protein TatE D Pvag_2316 lepB; Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D Pvag_0078 lspA; prolipoprotein signal peptidase (SPase II) K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum D Pvag_0414 htpG; Chaperone protein htpG K04079 HSP90A; molecular chaperone HtpG C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:pva04122] D Pvag_2289 yfhO; putative L-cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Pvag_2286 sseA; putative thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D Pvag_3018 yhhP; Sulfurtransferase tusA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D Pvag_2899 dsrH; putative intracellular sulfur oxidation protein K07237 tusB; tRNA 2-thiouridine synthesizing protein B D Pvag_2901 dsrE; Putative intracellular sulfur reduction protein K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-] D Pvag_0791 yccK; putative sulfite reductase K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-] D Pvag_0937 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D Pvag_0601 moaE; Molybdopterin-converting factor subunit 2 K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D Pvag_0597 moaA; Molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D Pvag_0600 moaD; Molybdopterin-converting factor subunit 1 K03636 moaD; sulfur-carrier protein D Pvag_0673 moeB; Molybdopterin biosynthesis protein moeB K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80] D Pvag_pPag30161 thiF; thiazole biosynthesis adenylyltransferase ThiF K21147 moeZR; sulfur-carrier protein adenylyltransferase/sulfurtransferase [EC:2.7.7.80 2.7.7.- 2.8.1.11 2.8.1.-] D Pvag_0599 moaC; Molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D Pvag_0068 mog; Molybdopterin biosynthesis mog protein K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75] D Pvag_0598 moaB; Molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75] D Pvag_0362 thiI; Thiamine biosynthesis protein thiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D Pvag_pPag30159 thiS; thiamine biosynthesis protein ThiS K03154 thiS; sulfur carrier protein C 03050 Proteasome C 03018 RNA degradation [PATH:pva03018] D Pvag_2503 ygdP; putative invasion protein K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D Pvag_0886 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] D Pvag_3380 rhlB; putative ATP-dependent RNA helicase K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7] D Pvag_0973 eno1; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Pvag_2458 eno3; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Pvag_3683 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D Pvag_0609 rhlE; Putative ATP-dependent RNA helicase rhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D Pvag_2785 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D Pvag_3685 deaD; Cold-shock DEAD box protein A K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D Pvag_3414 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D Pvag_3382 rho; Transcription termination factor rho K03628 rho; transcription termination factor Rho D Pvag_1290 pfka1; putative 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Pvag_3162 pfka3; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Pvag_0071 dnaK; Chaperone protein dnaK K04043 dnaK; molecular chaperone DnaK D Pvag_3611 groEL; 60 kDa chaperonin (groEL protein) K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Pvag_2792 hfq; Protein hfq K03666 hfq; host factor-I protein D Pvag_2258 ppk; Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D Pvag_0181 pcnB; poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:pva03030] D Pvag_1644 hypothetical protein K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7] D Pvag_1649 holE; DNA polymerase III, theta subunit K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7] D Pvag_0243 dnaQ; DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Pvag_0217 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Pvag_0411 dnaX; DNA polymerase III, tau and gamma subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Pvag_0900 holB; DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Pvag_0494 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Pvag_0032 holD; DNA polymerase III, psi subunit K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7] D Pvag_3720 holC; DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D Pvag_3308 dnaN; DNA polymerase III, beta-subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Pvag_3522 dnaB; Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D Pvag_2667 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D Pvag_3530 ssb; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D Pvag_0242 rnhA; Ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D Pvag_0216 rnhB; Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D Pvag_3229 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Pvag_2198 lig; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D Pvag_3210 yicF; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:pva03410] D Pvag_1234 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D Pvag_2327 ung; uracil-DNA-glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D Pvag_2572 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D Pvag_3193 mutM; formamidopyrimidine DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D Pvag_0542 nei; endonuclease VIII and DNA N-glycosylase with an AP lyase activity K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18] D Pvag_0566 ada; DNA methylation and regulatory protein K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D Pvag_3285 tag; putative DNA-3-methyladenine glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D Pvag_2669 mug; G/U mismatch-specific DNA glycosylase K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28] D Pvag_0976 hypothetical protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D Pvag_1543 xthA; Exonuclease III K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2] D Pvag_2040 nfo; Endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D Pvag_3229 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Pvag_2516 recJ; Single-stranded DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Pvag_2198 lig; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D Pvag_3210 yicF; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:pva03420] D Pvag_0921 mfd; Transcription-repair-coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D Pvag_3529 uvrA; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A D Pvag_pPag10127 uvrA; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A D Pvag_0595 uvrB; UvrABC system protein B K03702 uvrB; excinuclease ABC subunit B D Pvag_0814 uvrC; UvrABC system protein C K03703 uvrC; excinuclease ABC subunit C D Pvag_3408 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Pvag_3229 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Pvag_2198 lig; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D Pvag_3210 yicF; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03430 Mismatch repair [PATH:pva03430] D Pvag_2435 mutS; DNA mismatch repair protein mutS K03555 mutS; DNA mismatch repair protein MutS D Pvag_2794 mutL; DNA mismatch repair protein mutL K03572 mutL; DNA mismatch repair protein MutL D Pvag_2504 mutH; DNA mismatch repair protein mutH K03573 mutH; DNA mismatch repair protein MutH D Pvag_3408 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Pvag_1937 sbcB; exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1] D Pvag_2270 xseA; Exonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D Pvag_0361 xseB; exonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D Pvag_1650 exoX; exodeoxyribonuclease X K10857 exoX; exodeoxyribonuclease X [EC:3.1.11.-] D Pvag_2516 recJ; Single-stranded DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Pvag_3530 ssb; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D Pvag_0217 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Pvag_3308 dnaN; DNA polymerase III, beta-subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Pvag_0411 dnaX; DNA polymerase III, tau and gamma subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Pvag_0494 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Pvag_0900 holB; DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Pvag_0243 dnaQ; DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Pvag_1644 hypothetical protein K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7] D Pvag_1649 holE; DNA polymerase III, theta subunit K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7] D Pvag_3720 holC; DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D Pvag_0032 holD; DNA polymerase III, psi subunit K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7] D Pvag_2198 lig; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D Pvag_3210 yicF; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D Pvag_2935 dam; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] C 03440 Homologous recombination [PATH:pva03440] D Pvag_2516 recJ; Single-stranded DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Pvag_3530 ssb; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D Pvag_3307 recf3; DNA replication and repair protein recF K03629 recF; DNA replication and repair protein RecF D Pvag_2313 recO; DNA repair protein recO (Recombination protein O) K03584 recO; DNA repair protein RecO (recombination protein O) D Pvag_0413 recR; Recombination protein recR K06187 recR; recombination protein RecR D Pvag_2404 recA; Protein recA (Recombinase A) K03553 recA; recombination protein RecA D Pvag_3229 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Pvag_1666 ruvA; Holliday junction ATP-dependent DNA helicase ruvA K03550 ruvA; holliday junction DNA helicase RuvA D Pvag_1665 ruvB; Holliday junction ATP-dependent DNA helicase ruvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D Pvag_1668 ruvC; crossover junction endodeoxyribonuclease K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D Pvag_2706 recg1; hypothetical protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D Pvag_3215 recg3; ATP-dependent DNA helicase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D Pvag_2493 recB; exodeoxyribonuclease V beta chain K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D Pvag_2495 recC; Exonuclease V gamma subunit K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] D Pvag_2492 recD; exodeoxyribonuclease V alpha chain K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D Pvag_0217 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Pvag_3308 dnaN; DNA polymerase III, beta-subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Pvag_0411 dnaX; DNA polymerase III, tau and gamma subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Pvag_0494 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Pvag_0900 holB; DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Pvag_0243 dnaQ; DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Pvag_1644 hypothetical protein K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7] D Pvag_1649 holE; DNA polymerase III, theta subunit K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7] D Pvag_3720 holC; DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D Pvag_0032 holD; DNA polymerase III, psi subunit K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7] D Pvag_3144 priA; Primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D Pvag_2777 priB; Primosomal replication protein N K02686 priB; primosomal replication protein N D Pvag_0408 priC; Primosomal replication protein N'' K04067 priC; primosomal replication protein N'' D Pvag_3282 dnaT; Primosomal protein 1 (Primosomal protein I) K02317 dnaT; DNA replication protein DnaT C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 [PATH:pva03250] D Pvag_2926 ppiA; peptidyl-prolyl cis-trans isomerase A (rotamase A) K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus and Alphavirus C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus C 03273 Virion - Lassa virus and SFTS virus C 03272 Virion - Hepatitis viruses C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:pva02010] D Pvag_2212 cysP; Thiosulfate-binding protein precursor K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein D Pvag_3161 sbp; Sulfate-binding protein precursor K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D Pvag_2211 cysT; Probable sulfate transport system permease protein cysT K02046 cysU; sulfate/thiosulfate transport system permease protein D Pvag_2210 cysW; Sulfate transport system permease protein cysW K02047 cysW; sulfate/thiosulfate transport system permease protein D Pvag_2209 cysA; ATP-binding component of sulfate permease A protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D Pvag_1092 nasF; Nitrate transport protein nrtA K15576 nrtA; nitrate/nitrite transport system substrate-binding protein D Pvag_1093 nasE; Nitrate transport permease protein nrtB K15577 nrtB; nitrate/nitrite transport system permease protein D Pvag_1094 nasD; nitrate ABC transporter, ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4] D Pvag_2913 tauA; Taurine-binding periplasmic protein precursor K15551 tauA; taurine transport system substrate-binding protein D Pvag_2911 tauC; Taurine transport permease protein tauC K15552 tauC; taurine transport system permease protein D Pvag_2912 tauB; taurine ATP-binding component of a transport system K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7] D Pvag_0762 ssuA; Putative aliphatic sulfonates-binding protein precursor K15553 ssuA; sulfonate transport system substrate-binding protein D Pvag_0760 ssuC; Sulfonate transport permease protein ssuC K15554 ssuC; sulfonate transport system permease protein D Pvag_0759 ssuB; Sulfonate import ATP-binding protein ssuB K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D Pvag_pPag30441 Putative ABC transport system, periplasmic solute-binding protein precursor K15598 thiY; putative hydroxymethylpyrimidine transport system substrate-binding protein D Pvag_pPag30440 Putative ABC transport system, permease protein K15599 thiX; putative hydroxymethylpyrimidine transport system permease protein D Pvag_pPag30439 Putative ABC transport system, ATP-binding protein K15600 thiZ; putative hydroxymethylpyrimidine transport system ATP-binding protein D Pvag_0582 modA; Molybdate-binding periplasmic protein precursor modA K02020 modA; molybdate transport system substrate-binding protein D Pvag_1301 Putative ABC transport system, periplasmic solute-binding protein precursor K02020 modA; molybdate transport system substrate-binding protein D Pvag_pPag30297 mbp; hypothetical protein K02020 modA; molybdate transport system substrate-binding protein D Pvag_0583 modB; molybdate ABC transporter, permease protein modB K02018 modB; molybdate transport system permease protein D Pvag_0584 modC; molybdenum transport ATP-binding protein modC K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D Pvag_0580 modF; molybdate ABC transporter, ATP-binding protein modF K05776 modF; molybdate transport system ATP-binding protein D Pvag_1358 Putative ABC transport system, periplasmic solute-binding protein precursor K02012 afuA; iron(III) transport system substrate-binding protein D Pvag_1357 putative ABC transport system, permease component K02011 afuB; iron(III) transport system permease protein D Pvag_1356 Putative ABC transport system, ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D Pvag_0102 thiB; Thiamine-binding periplasmic protein precursor K02064 thiB; thiamine transport system substrate-binding protein D Pvag_0101 thiP; Thiamine transport system permease protein thiP K02063 thiP; thiamine transport system permease protein D Pvag_0100 thiQ; thiamine ABC transporter, ATP-binding protein thiQ K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15] D Pvag_0927 potD; Spermidine/putrescine-binding periplasmic protein precursor potD K11069 potD; spermidine/putrescine transport system substrate-binding protein D Pvag_0928 potC; Spermidine/putrescine transport system permease protein potC K11070 potC; spermidine/putrescine transport system permease protein D Pvag_0929 potB; Spermidine/putrescine transport system permease protein potB K11071 potB; spermidine/putrescine transport system permease protein D Pvag_0930 potA; ATP-binding component of spermidine/putrescine transport K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D Pvag_0696 potF; Spermidine/putrescine-binding periplasmic protein 2 precursor K11073 potF; putrescine transport system substrate-binding protein D Pvag_0699 potI; Putrescine transport system permease protein potI K11074 potI; putrescine transport system permease protein D Pvag_0698 potH; putrescine transport system permease protein potH K11075 potH; putrescine transport system permease protein D Pvag_0697 potG; ATP-binding component of putrescine transport system K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16] D Pvag_0633 yehZ; putative ABC transporter, substrate-binding periplasmic protein precursor K05845 opuC; osmoprotectant transport system substrate-binding protein D Pvag_1380 Putative ABC transport system, periplasmic solute-binding protein precursor K05845 opuC; osmoprotectant transport system substrate-binding protein D Pvag_0634 yehY; putative ABC transport system permease protein K05846 opuBD; osmoprotectant transport system permease protein D Pvag_0636 yehW; putative ABC transport system permease protein K05846 opuBD; osmoprotectant transport system permease protein D Pvag_1379 Putative ABC transport system, permease protein K05846 opuBD; osmoprotectant transport system permease protein D Pvag_1381 Putative ABC transport system, permease component K05846 opuBD; osmoprotectant transport system permease protein D Pvag_0635 yehX; putative ABC transporter, ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D Pvag_1382 putative ABC transport system, ATPase component K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D Pvag_pPag30208 malE; Maltose-binding periplasmic protein precursor K10108 malE; maltose/maltodextrin transport system substrate-binding protein D Pvag_pPag30207 malF; Maltose transport system permease protein malF K10109 malF; maltose/maltodextrin transport system permease protein D Pvag_pPag30206 malG; Inner membrane ABC transporter permease protein malG K10110 malG; maltose/maltodextrin transport system permease protein D Pvag_3581 Putative ABC transport system, ATP-binding protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D Pvag_pPag30109 ganK; Putative oligogalactan ABC transporter, ATP-binding protein ganK K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D Pvag_pPag30209 malK; ATP-binding component of transport system for maltose K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D Pvag_pPag30315 Putative ABC transport system, ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D Pvag_pPag30110 ganE; Putative oligogalactan ABC transporter, periplasmic solute-binding protein ganE K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein D Pvag_pPag30111 ganF; Putative oligogalactan transport system permease protein ganF K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D Pvag_pPag30112 ganG; Putative oligogalactan ABC transporter, permease protein ganG K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D Pvag_3583 yurO; Putative ABC transport system, periplasmic solute-binding protein precursor yurO K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D Pvag_3584 yurN; Putative ABC transport system, permease protein yurN K10118 msmF; raffinose/stachyose/melibiose transport system permease protein D Pvag_3585 yurM; Putative ABC transport system, permease protein yurM K10119 msmG; raffinose/stachyose/melibiose transport system permease protein D Pvag_3644 yrbC; Putative ABC-type transport system, auxiliary component yrbC K07323 mlaC; phospholipid transport system substrate-binding protein D Pvag_3643 yrbD; Putative ABC transport system, periplasmic solute-binding protein yrbD precursor K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D Pvag_3642 yrbE; Putative ABC transport system, permease protein yrbE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D Pvag_3645 yrbB; Anti-sigma F factor antagonist K07122 mlaB; phospholipid transport system transporter-binding protein D Pvag_3641 yrbF; Putative ABC transport system, ATP-binding protein yrbF K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D Pvag_1835 HTH-type transcriptional repressor purR K10439 rbsB; ribose transport system substrate-binding protein D Pvag_3241 rbsB; ABC-type sugar transport system, periplasmic component (rbsB) K10439 rbsB; ribose transport system substrate-binding protein D Pvag_3731 rbsc3; putative ABC transport system, periplasmic substrate-binding protein precursor K10439 rbsB; ribose transport system substrate-binding protein D Pvag_pPag10101 Putative ABC transport system, periplasmic solute-binding protein precursor K10439 rbsB; ribose transport system substrate-binding protein D Pvag_1836 putative ABC transport system, permease protein K10440 rbsC; ribose transport system permease protein D Pvag_3242 rbsc1; Ribose transport system permease protein rbsC K10440 rbsC; ribose transport system permease protein D Pvag_3728 Putative ABC transport system, permease protein K10440 rbsC; ribose transport system permease protein D Pvag_1837 putative ABC transport system, ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D Pvag_3243 rbsA; ATP-binding component of D-ribose high-affinity transport system K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D Pvag_3729 putative ABC transport system, ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D Pvag_3244 rbsD; High affinity ribose transport protein rbsD K06726 rbsD; D-ribose pyranase [EC:5.4.99.62] D Pvag_1251 araF; L-arabinose-binding periplasmic protein precursor K10537 araF; L-arabinose transport system substrate-binding protein D Pvag_1253 araH; High-affinity L-arabinose transporter, permease protein AraH K10538 araH; L-arabinose transport system permease protein D Pvag_1252 araG; L-arabinose transport ATP-binding protein K10539 araG; L-arabinose transport system ATP-binding protein [EC:7.5.2.12] D Pvag_1244 ytfQ; Putative ABC transport system, periplasmic solute-binding protein precursor K23508 ytfQ; galactofuranose transport system substrate-binding protein D Pvag_1246 ytfT; Putative ABC transport system, permease protein K23509 ytfT; galactofuranose transport system permease protein D Pvag_1247 yjfF; Putative ABC transport system, permease protein K23509 ytfT; galactofuranose transport system permease protein D Pvag_1245 ytfR; Putative ABC transport system, ATP-binding protein K10820 ytfR; galactofuranose transport system ATP-binding protein [EC:7.5.2.9] D Pvag_2026 mglB; D-galactose-binding periplasmic protein precursor K10540 mglB; methyl-galactoside transport system substrate-binding protein D Pvag_2024 mglC; Galactoside transport system permease protein mglC K10541 mglC; methyl-galactoside transport system permease protein D Pvag_2025 mglA; ATP-binding component of methyl-galactoside transport and galactose taxis K10542 mglA; methyl-galactoside transport system ATP-binding protein [EC:7.5.2.11] D Pvag_3275 xylF; D-galactose-binding periplasmic protein precursor K10543 xylF; D-xylose transport system substrate-binding protein D Pvag_3277 xylH; Xylose transport system permease protein xylH K10544 xylH; D-xylose transport system permease protein D Pvag_3276 xylG; ATP-binding protein of xylose transport system K10545 xylG; D-xylose transport system ATP-binding protein [EC:7.5.2.10] D Pvag_1000 HTH-type transcriptional repressor purR K17202 eryG; erythritol transport system substrate-binding protein D Pvag_1101 HTH-type transcriptional repressor purR K17202 eryG; erythritol transport system substrate-binding protein D Pvag_1003 putative ABC transport system permease protein K17203 eryF; erythritol transport system permease protein D Pvag_1104 putative ABC transport system permease protein K17203 eryF; erythritol transport system permease protein D Pvag_1002 putative ABC transport system, ATP-binding protein K17204 eryE; erythritol transport system ATP-binding protein D Pvag_1103 putative ABC transport system, ATP-binding protein K17204 eryE; erythritol transport system ATP-binding protein D Pvag_1896 mocB; HTH-type transcriptional repressor purR K17213 K17213; inositol transport system substrate-binding protein D Pvag_3073 Putative ABC transport system, periplasmic solute-binding protein precursor K17213 K17213; inositol transport system substrate-binding protein D Pvag_1894 putative ABC transport system, permease component K17214 K17214; inositol transport system permease protein D Pvag_1895 putative ABC transport system, ATP-binding protein K17215 K17215; inositol transport system ATP-binding protein D Pvag_3001 ugpB; sn-glycerol-3-phosphate-binding periplasmic protein ugpB precursor K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein D Pvag_3000 ugpA; sn-glycerol-3-phosphate transport system permease protein ugpA K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein D Pvag_2999 ugpE; SN-glycerol-3-phosphate transport system permease protein ugpE K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein D Pvag_2998 ugpC; ATP-binding component of sn-glycerol 3-phosphate transport system K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10] D Pvag_0338 psts1; Phosphate-binding protein pstS precursor (PBP) K02040 pstS; phosphate transport system substrate-binding protein D Pvag_3267 psts3; Phosphate-binding protein pstS precursor (PBP) K02040 pstS; phosphate transport system substrate-binding protein D Pvag_2257 pstc1; Phosphate transport system permease protein pstC K02037 pstC; phosphate transport system permease protein D Pvag_3268 pstc3; Phosphate transport system permease protein pstC K02037 pstC; phosphate transport system permease protein D Pvag_2256 psta1; Phosphate transport system permease protein pstA K02038 pstA; phosphate transport system permease protein D Pvag_3269 psta3; Phosphate transport system permease protein pstA K02038 pstA; phosphate transport system permease protein D Pvag_2255 pstb1; Phosphate import ATP-binding protein pstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D Pvag_3270 pstb3; phosphate transport ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D Pvag_1841 phnD; Phosphonate ABC transporter, periplasmic component K02044 phnD; phosphonate transport system substrate-binding protein D Pvag_1839 phnE; Phosphonates transport system permease protein phnE K02042 phnE; phosphonate transport system permease protein D Pvag_1840 ptxc3; Phosphite/phosphonate transport system permease protein K02042 phnE; phosphonate transport system permease protein D Pvag_1842 phnC; Phosphonates import ATP-binding protein phnC K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2] D Pvag_1410 Putative ABC transport system, periplasmic solute-binding protein precursor K10013 argT; lysine/arginine/ornithine transport system substrate-binding protein D Pvag_1960 Putative ABC transport system, periplasmic solute-binding protein precursor K10013 argT; lysine/arginine/ornithine transport system substrate-binding protein D Pvag_pPag30283 Putative ABC transport system, periplasmic solute-binding protein precursor K10013 argT; lysine/arginine/ornithine transport system substrate-binding protein D Pvag_2119 hisM; Histidine transport system, permease component K10015 hisM; histidine transport system permease protein D Pvag_2120 hisQ; Histidine transport system permease protein K10016 hisQ; histidine transport system permease protein D Pvag_2118 hisP; ATP-binding component of histidine transport K10017 hisP; histidine transport system ATP-binding protein [EC:7.4.2.1] D Pvag_2121 argT; Lysine-arginine-ornithine-binding periplasmic protein precursor K10014 hisJ; histidine transport system substrate-binding protein D Pvag_0660 glnh1; Glutamine-binding periplasmic protein precursor glnH K10036 glnH; glutamine transport system substrate-binding protein D Pvag_1683 glnh3; Glutamine-binding periplasmic protein precursor K10036 glnH; glutamine transport system substrate-binding protein D Pvag_0659 glnp1; Glutamine transport system permease protein glnP K10037 glnP; glutamine transport system permease protein D Pvag_1682 glnp3; Putative glutamine transport system permease protein glnP K10037 glnP; glutamine transport system permease protein D Pvag_0658 glnq1; Glutamine transport ATP-binding protein glnQ K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1] D Pvag_1681 glnq3; putative glutamine transport ATP-binding protein GlnQ K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1] D Pvag_0702 artJ; Arginine-binding periplasmic protein 2 precursor K09996 artJ; arginine transport system substrate-binding protein D Pvag_0705 artI; Arginine-binding periplasmic protein precursor K09997 artI; arginine transport system substrate-binding protein D Pvag_0703 artM; Arginine transport system permease protein artM K09998 artM; arginine transport system permease protein D Pvag_0704 artQ; Arginine transport system permease protein artQ K09999 artQ; arginine transport system permease protein D Pvag_0706 artP; ATP-binding component of arginine transport system K10000 artP; arginine transport system ATP-binding protein [EC:7.4.2.1] D Pvag_0501 ybeJ; Glutamate/aspartate transport system, periplasmic-binding protein precursor K10001 gltI; glutamate/aspartate transport system substrate-binding protein D Pvag_0499 gltK; Glutamate/aspartate transport system permease protein gltK K10002 gltK; glutamate/aspartate transport system permease protein D Pvag_0500 gltJ; Glutamate/aspartate transport system permease protein gltJ K10003 gltJ; glutamate/aspartate transport system permease protein D Pvag_0498 gltL; ATP-binding protein of glutamate/aspartate transport system K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1] D Pvag_0651 Putative ABC transport system, substrate-binding periplasmic protein precursor K10018 occT; octopine/nopaline transport system substrate-binding protein D Pvag_pPag30021 putative ABC transport system, periplasmic ligand binding protein K10018 occT; octopine/nopaline transport system substrate-binding protein D Pvag_0653 putative ABC transport system permease protein K10019 occM; octopine/nopaline transport system permease protein D Pvag_pPag30023 Putative ABC transport system, permease protein K10019 occM; octopine/nopaline transport system permease protein D Pvag_0652 Putative ABC transport system, permease protein K10020 occQ; octopine/nopaline transport system permease protein D Pvag_pPag30022 Putative ABC transport system, permease protein K10020 occQ; octopine/nopaline transport system permease protein D Pvag_0654 putative ABC transport system, ATPase component K10021 occP; octopine/nopaline transport system ATP-binding protein [EC:7.4.2.1] D Pvag_pPag30024 Putative ABC transport system, ATP-binding protein K10021 occP; octopine/nopaline transport system ATP-binding protein [EC:7.4.2.1] D Pvag_2837 yhdW; Putative amino-acid ABC transporter-binding protein yhdW precursor K09969 aapJ; general L-amino acid transport system substrate-binding protein D Pvag_2838 yhdX; Putative amino-acid ABC transporter permease protein yhdX K09970 aapQ; general L-amino acid transport system permease protein D Pvag_2839 yhdY; Inner membrane amino-acid ABC transporter permease protein yhdY K09971 aapM; general L-amino acid transport system permease protein D Pvag_2840 yhdZ; putative ATP-binding component of a transport system yhdZ K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1] D Pvag_1753 fliY; Putative ABC transport system, periplasmic protein precursor K02424 tcyA; L-cystine transport system substrate-binding protein D Pvag_1752 yecS; Putative ABC transport system permease protein K10009 tcyB; L-cystine transport system permease protein D Pvag_1751 yecC; putative ABC transporter, ATP-biniding component K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1] D Pvag_pPag30380 Putative ABC transport system, periplasmic solute-binding protein precursor K16957 tcyK; L-cystine transport system substrate-binding protein D Pvag_pPag30379 Putative ABC transport system, permease protein K16958 tcyL; L-cystine transport system permease protein D Pvag_pPag30378 Putative ABC transport system, permease protein K16959 tcyM; L-cystine transport system permease protein D Pvag_pPag30381 Putative ABC transport system, ATP-binding protein K16960 tcyN; L-cystine transport system ATP-binding protein [EC:7.4.2.1] D Pvag_3006 livJ; Leu/Ile/Val-binding protein 2 precursor K01999 livK; branched-chain amino acid transport system substrate-binding protein D Pvag_3005 livH; High-affinity branched-chain amino acid transport system permease protein livH K01997 livH; branched-chain amino acid transport system permease protein D Pvag_3004 livM; High-affinity branched-chain amino acid transport system permease protein livM K01998 livM; branched-chain amino acid transport system permease protein D Pvag_3003 livG; high-affinity branched-chain amino acid transport ATP-binding protein livG K01995 livG; branched-chain amino acid transport system ATP-binding protein D Pvag_3002 livF; Phosphate import ATP-binding protein pstB K01996 livF; branched-chain amino acid transport system ATP-binding protein D Pvag_0228 metQ; D-methionine-binding lipoprotein MetQ precursor K02073 metQ; D-methionine transport system substrate-binding protein D Pvag_pPag10051 metQ; Putative ABC transport system, periplasmic solute-binding protein precursor K02073 metQ; D-methionine transport system substrate-binding protein D Pvag_pPag30195 metQ1; Putative ABC transport system, periplasmic solute-binding protein precursor K02073 metQ; D-methionine transport system substrate-binding protein D Pvag_pPag30200 metQ3; Putative ABC transport system, periplasmic solute-binding protein precursor K02073 metQ; D-methionine transport system substrate-binding protein D Pvag_pPag30300 yaeC; Putative ABC transport system, periplasmic solute-binding protein precursor K02073 metQ; D-methionine transport system substrate-binding protein D Pvag_0229 metI; D-methionine transport system permease protein MetI K02072 metI; D-methionine transport system permease protein D Pvag_pPag10053 metI; Putative ABC transport system, permease protein K02072 metI; D-methionine transport system permease protein D Pvag_pPag30197 metI1; Putative ABC transport system, permease protein K02072 metI; D-methionine transport system permease protein D Pvag_pPag30202 metI3; Putative ABC transport system, permease protein K02072 metI; D-methionine transport system permease protein D Pvag_0230 metN; D-methionine transport ATP-binding protein MetN K02071 metN; D-methionine transport system ATP-binding protein D Pvag_pPag10052 metN; Putative ABC transport system, ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein D Pvag_pPag30196 metN1; Putative ABC transport system, ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein D Pvag_pPag30201 metN3; Putative ABC transport system, ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein D Pvag_0050 Putative ABC transport system, periplasmic solute-binding protein precursor K11959 urtA; urea transport system substrate-binding protein D Pvag_0049 Putative ABC transport system, permease protein K11960 urtB; urea transport system permease protein D Pvag_0048 Putative ABC transport system, permease protein K11961 urtC; urea transport system permease protein D Pvag_0047 Putative ABC transport system, ATP-binding protein K11962 urtD; urea transport system ATP-binding protein D Pvag_0046 Putative ABC transport system, ATP-binding protein K11963 urtE; urea transport system ATP-binding protein D Pvag_0593 putative ABC transport system, ATPase-binding component K11963 urtE; urea transport system ATP-binding protein D Pvag_1447 mppA; Periplasmic murein peptide-binding protein precursor K15580 oppA; oligopeptide transport system substrate-binding protein D Pvag_1528 oppA2; Periplasmic oligopeptide-binding protein precursor K15580 oppA; oligopeptide transport system substrate-binding protein D Pvag_1529 oppA1; Periplasmic oligopeptide-binding protein precursor K15580 oppA; oligopeptide transport system substrate-binding protein D Pvag_1527 oppb3; Oligopeptide transport system permease protein oppB K15581 oppB; oligopeptide transport system permease protein D Pvag_1526 oppc3; Oligopeptide transport system permease protein oppC K15582 oppC; oligopeptide transport system permease protein D Pvag_1525 oppd3; Oligopeptide transport ATP-binding protein oppD K15583 oppD; oligopeptide transport system ATP-binding protein D Pvag_1524 oppf3; Oligopeptide transport ATP-binding protein oppF K10823 oppF; oligopeptide transport system ATP-binding protein D Pvag_1408 dppa1; Putative ABC transport system, periplasmic solute-binding protein precursor K12368 dppA; dipeptide transport system substrate-binding protein D Pvag_3347 dppa3; Putative ABC transport system, periplasmic solute-binding protein precursor K12368 dppA; dipeptide transport system substrate-binding protein D Pvag_3348 dppb3; Putative ABC transport system, permease protein K12369 dppB; dipeptide transport system permease protein D Pvag_3349 dppc3; Putative ABC transport system, permease protein K12370 dppC; dipeptide transport system permease protein D Pvag_3350 dppd3; Putative ABC transport system, ATP-binding protein K12371 dppD; dipeptide transport system ATP-binding protein D Pvag_3351 dppf3; Putative ABC transport system, ATP-binding protein K12372 dppF; dipeptide transport system ATP-binding protein D Pvag_1463 sapA; Peptide transport periplasmic protein sapA precursor K19226 sapA; cationic peptide transport system substrate-binding protein D Pvag_1464 sapB; Peptide transport system permease protein sapB K19227 sapB; cationic peptide transport system permease protein D Pvag_1468 sapC; Peptide transport system permease protein sapC K19228 sapC; cationic peptide transport system permease protein D Pvag_1469 sapD; Peptide transport system ATP-binding protein sapD K19229 sapD; cationic peptide transport system ATP-binding protein D Pvag_1470 sapF; Peptide transport system ATP-binding protein sapF K19230 sapF; cationic peptide transport system ATP-binding protein D Pvag_0677 ylib1; Putative ABC transport system, periplasmic substrate-binding component yliB K13889 gsiB; glutathione transport system substrate-binding protein D Pvag_1055 ylib3; Putative ABC transport system, periplasmic substrate-binding protein yliB precursor K13889 gsiB; glutathione transport system substrate-binding protein D Pvag_0678 ylic1; putative ABC transport system, permease component yliC K13890 gsiC; glutathione transport system permease protein D Pvag_1056 ylic3; Putative ABC transport system, permease protein yliC K13890 gsiC; glutathione transport system permease protein D Pvag_0679 ylid1; Putative ABC transport system, permease protein K13891 gsiD; glutathione transport system permease protein D Pvag_1057 ylid3; Putative ABC transport system, permease protein K13891 gsiD; glutathione transport system permease protein D Pvag_0676 ylia1; Putative ABC transport system, ATP-binding protein yliA K13892 gsiA; glutathione transport system ATP-binding protein D Pvag_1054 ylia3; putative ABC transport system, ATP-binding protein yliA K13892 gsiA; glutathione transport system ATP-binding protein D Pvag_2052 yejA; ABC transport system periplasmic protein yejA precursor K13893 yejA; microcin C transport system substrate-binding protein D Pvag_2053 yejB; inner membrane ABC transporter permease protein yejB K13894 yejB; microcin C transport system permease protein D Pvag_2054 yejE; Inner membrane ABC transporter permease protein yejE K13895 yejE; microcin C transport system permease protein D Pvag_2055 yejF; putative ABC transporter, ATP binding protein yejF K13896 yejF; microcin C transport system ATP-binding protein D Pvag_3658 fepB; Ferrienterobactin-binding periplasmic protein precursor K23185 fepB; ferric enterobactin transport system substrate-binding protein D Pvag_3660 fepD; Ferric enterobactin transport system permease protein fepD K23186 fepD; iron-siderophore transport system permease protein D Pvag_3661 fepG; Ferric enterobactin transport system permease protein fepG K23187 fepG; iron-siderophore transport system permease protein D Pvag_3662 fepC; ATP-binding component of ferric enterobactin transport fepC K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-] D Pvag_0190 fhuB; Ferrichrome transport system permease protein fhuB K23228 fhuB; ferric hydroxamate transport system permease protein D Pvag_0189 fhuC; Ferrichrome transport ATP-binding protein fhuC K10829 fhuC; ferric hydroxamate transport system ATP-binding protein [EC:7.2.2.16] D Pvag_0193 yadT; putative ABC transport system, substrate-binding protein precursor K06858 btuF; vitamin B12 transport system substrate-binding protein D Pvag_1142 btuC; Vitamin B12 import system permease protein btuC K06073 btuC; vitamin B12 transport system permease protein D Pvag_1144 btuD; ATP-binding component of vitamin B12 transport system K06074 btuD; vitamin B12 transport system ATP-binding protein [EC:7.6.2.8] D Pvag_1662 znuA; ABC transport system periplasmic zinc-binding protein znuA precursor K09815 znuA; zinc transport system substrate-binding protein D Pvag_1664 znuB; ABC transport system membrane protein znuB K09816 znuB; zinc transport system permease protein D Pvag_1663 znuC; ABC transport system, ATP-binding protein znuC K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D Pvag_pPag30486 sitA; Iron ABC transporter substrate-binding precursor K11604 sitA; manganese/iron transport system substrate-binding protein D Pvag_pPag30484 sitC; Iron transport system membrane protein sitC K11605 sitC; manganese/iron transport system permease protein D Pvag_pPag30483 sitD; Iron transport system membrane protein sitD K11606 sitD; manganese/iron transport system permease protein D Pvag_pPag30485 sitB; Iron transport protein, ATP-binding protein SitB K11607 sitB; manganese/iron transport system ATP-binding protein D Pvag_1967 wzt; polysaccharide ABC transporter, ATP-binding protein wzt K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14] D Pvag_0923 ycfU; lipoprotein releasing system, transmembrane protein K09808 lolC_E_F; lipoprotein-releasing system permease protein D Pvag_0925 ycfW; Lipoprotein releasing system transmembrane protein K09808 lolC_E_F; lipoprotein-releasing system permease protein D Pvag_0924 ycfV; Lipoprotein releasing system ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D Pvag_2158 Heme exporter protein D K02196 ccmD; heme exporter protein D D Pvag_2159 ccmC; Heme exporter protein C K02195 ccmC; heme exporter protein C D Pvag_2160 ccmB; Heme exporter protein B K02194 ccmB; heme exporter protein B D Pvag_2161 ccmA; heme exporter protein A K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D Pvag_3723 yjgP; Uncharacterized protein K07091 lptF; lipopolysaccharide export system permease protein D Pvag_3724 yjgQ; Inner membrane protein yjgQ K11720 lptG; lipopolysaccharide export system permease protein D Pvag_3635 yhbG; Putative ABC transport system, ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D Pvag_3009 ftsX; cell division membrane protein ftsX K09811 ftsX; cell division transport system permease protein D Pvag_3010 ftsE; cell division ATP-binding protein ftsE K09812 ftsE; cell division transport system ATP-binding protein D Pvag_0740 msba1; Lipid A export ATP-binding/permease protein msbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D Pvag_3371 msba3; Lipid A export ATP-binding/permease protein msbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D Pvag_0389 mdlA; putative ABC superfamily ATP-binding/permease protein mdlA K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump D Pvag_0390 mdlB; putative ABC superfamily ATP-binding/permease protein mdlB K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump D Pvag_pPag10096 cvaB; putative type I secretion system ATPase K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB D Pvag_3075 bapA; Putative ABC transport system, ATP-binding/permease protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump D Pvag_2074 cyab1; Cytoplasmic membrane export protein, ATP-binding protein K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D Pvag_3770 cyab3; putative type I secretion system ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D Pvag_0720 cydC; ATP-binding component of cytochrome-related transport K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC D Pvag_0721 cydD; transport ATP-binding protein cydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD D Pvag_2067 yojI; putative ABC transport system, permease/ATP-binding protein yojI K06159 yojI; multidrug/microcin transport system ATP-binding/permease protein C 02060 Phosphotransferase system (PTS) [PATH:pva02060] D Pvag_2204 ptsI; phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D Pvag_2203 ptsH; Phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr D Pvag_2205 crr; PTS system, glucose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D Pvag_0902 ptsG; PTS system, glucose-specific IIBC component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199] D Pvag_0521 nagE; pts system, N-acetylglucosamine-specific IIABC component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193] D Pvag_1476 malX; PTS system, maltose and glucose-specific II ABC K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D Pvag_pPag10154 scrA; PTS system, sucrose-specific IIBC component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211] D Pvag_pPag30319 bglF; PTS system, beta-glucoside-specific IIABC component K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-] D Pvag_pPag30436 ascF; PTS system, beta-glucoside-specific IIABC component K02753 ascF; beta-glucoside (arbutin/salicin/cellobiose) PTS system EIICB component [EC:2.7.1.-] D Pvag_3552 yfeV; PTS system, IIBC component, putative K11192 murP; N-acetylmuramic acid PTS system EIICB component [EC:2.7.1.192] D Pvag_3337 mtlA; PTS system, mannitol-specific IIABC component K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197] D Pvag_1592 manX; PTS system, mannose-specific IIAB component K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191] D Pvag_1593 manY; Mannose permease IIC component K02795 manY; mannose PTS system EIIC component D Pvag_1594 manZ; Mannose permease IID component K02796 manZ; mannose PTS system EIID component D Pvag_pPag20074 srlB1; Glucitol/sorbitol-specific phosphotransferase enzyme IIA component K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198] D Pvag_pPag20101 srlB3; Glucitol/sorbitol-specific phosphotransferase enzyme IIA component K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198] D Pvag_pPag20073 srlE1; PTS system, glucitol/sorbitol-specific IIBC component K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198] D Pvag_pPag20102 srlE3; PTS system, glucitol/sorbitol-specific IIBC component K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198] D Pvag_pPag20072 srlA1; PTS system, glucitol/sorbitol-specific IIC component 2 K02783 srlA; glucitol/sorbitol PTS system EIIC component D Pvag_pPag20103 srlA3; PTS system, glucitol/sorbitol-specific IIC component 2 K02783 srlA; glucitol/sorbitol PTS system EIIC component D Pvag_1295 ptxa1; PTS system, IIA component K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194] D Pvag_pPag30336 ptxA; putative PEP-dependent phosphotransferase system component II A K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194] D Pvag_1291 ptxB; putative sugar phosphotransferase component IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194] D Pvag_pPag30337 ptxB; putative PEP-dependent phosphotransferase system component IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194] D Pvag_1292 ptxc1; PTS permease IIC component K03475 ulaA; ascorbate PTS system EIIC component D Pvag_pPag30338 ptxC; Putative PEP-dependent phosphotransferase system IIC component K03475 ulaA; ascorbate PTS system EIIC component D Pvag_2043 fruB; PTS system, fructose-specific IIA/fpr component K11183 fruB; multiphosphoryl transfer protein [EC:2.7.1.202] D Pvag_2041 fruA; PTS system, fructose-specific IIBC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D Pvag_3766 ptxBC; PTS system, IIBC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D Pvag_3767 ptxa3; PTS system, IIA component K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202] D Pvag_2042 fruK; fructose-1-phosphate kinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] D Pvag_2502 ptsP; phosphoenolpyruvate-protein phosphotransferase K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9] D Pvag_3630 ptsO; Phosphocarrier protein NPr (Nitrogen-related HPr) K08485 ptsO; phosphocarrier protein NPr D Pvag_3632 ptsN; nitrogen regulatory IIA protein K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] C 03070 Bacterial secretion system [PATH:pva03070] D Pvag_2650 tolC; Outer membrane protein tolC precursor K12340 tolC; outer membrane protein D Pvag_pPag10094 Putative efflux pump outer membrane protein precursor K12340 tolC; outer membrane protein D Pvag_0348 secD; Protein-export membrane protein secD K03072 secD; preprotein translocase subunit SecD D Pvag_0349 secF; Protein-export membrane protein secF K03074 secF; preprotein translocase subunit SecF D Pvag_3461 secE; Preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D Pvag_3674 secG; Protein-export membrane protein secG K03075 secG; preprotein translocase subunit SecG D Pvag_2868 secY; Preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D Pvag_0347 yajC; UPF0092 membrane protein yajC K03210 yajC; preprotein translocase subunit YajC D Pvag_3313 yidC; Inner membrane protein yidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D Pvag_0130 secA; Preprotein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Pvag_0129 secM; Secretion monitor precursor K13301 secM; secretion monitor D Pvag_3011 ftsY; Cell division protein ftsY K03110 ftsY; fused signal recognition particle receptor D Pvag_3172 secB; Protein-export protein secB K03071 secB; preprotein translocase subunit SecB D Pvag_2390 ffh; Signal recognition 54 kDa protein (SRP54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D Pvag_3433 tatA; Sec-independent protein translocase protein tatA/E K03116 tatA; sec-independent protein translocase protein TatA D Pvag_3434 tatB; Sec-independent protein translocase protein tatB K03117 tatB; sec-independent protein translocase protein TatB D Pvag_3435 tatC; Sec-independent protein translocase protein tatC K03118 tatC; sec-independent protein translocase protein TatC D Pvag_0483 ybeC; Sec-independent protein translocase protein tatA/E K03425 tatE; sec-independent protein translocase protein TatE D Pvag_1044 vgrS; Putative type VI secretion system, effector protein vgrS K11904 vgrG; type VI secretion system secreted protein VgrG D Pvag_1031 hcp; Putative type VI secretion system, effector protein hcp K11903 hcp; type VI secretion system secreted protein Hcp D Pvag_1022 Putative type VI secretion system, core protein K11906 vasD; type VI secretion system protein VasD D Pvag_1025 Putative type VI secretion system, core protein K11891 impL; type VI secretion system protein ImpL D Pvag_1088 Putative type VI secretion system, core protein K11891 impL; type VI secretion system protein ImpL D Pvag_1024 Putative type VI secretion system, core protein K11892 impK; type VI secretion system protein ImpK D Pvag_1089 Putative type VI secretion system, core protein K11892 impK; type VI secretion system protein ImpK D Pvag_1042 clpV; Putative type VI secretion system, core protein ATPase K11907 vasG; type VI secretion system protein VasG B B 09132 Signal transduction C 02020 Two-component system [PATH:pva02020] D Pvag_0337 phoR; phosphate regulon sensor protein PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D Pvag_0336 phoB; Phosphate regulon transcriptional regulatory protein phoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D Pvag_0338 psts1; Phosphate-binding protein pstS precursor (PBP) K02040 pstS; phosphate transport system substrate-binding protein D Pvag_3267 psts3; Phosphate-binding protein pstS precursor (PBP) K02040 pstS; phosphate transport system substrate-binding protein D Pvag_0933 phoQ; sensor protein kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D Pvag_0934 phoP; Response regulator K07660 phoP; two-component system, OmpR family, response regulator PhoP D Pvag_0918 pagC; Virulence membrane protein pagC precursor K07804 pagC; putatice virulence related protein PagC D Pvag_2950 envZ; Osmolarity sensor protein EnvZ K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D Pvag_2951 ompr3; Two-component response regulator ompR K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR D Pvag_2072 ompC; Outer membrane protein C precursor K09475 ompC; outer membrane pore protein C D Pvag_0755 ompf1; Outer membrane pore protein F precursor K09476 ompF; outer membrane pore protein F D Pvag_1113 ompf3; Outer membrane porin protein precursor K09476 ompF; outer membrane pore protein F D Pvag_3168 cpxA; probable sensor protein (histidine protein kinase), acting on ArcA K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3] D Pvag_3167 cpxr3; Transcriptional regulatory protein srrA K07662 cpxR; two-component system, OmpR family, response regulator CpxR D Pvag_2731 yqjB; Uncharacterized protein yqjB K25864 mzrA; modulator protein MzrA D Pvag_1428 rstB; two component sensor kinase K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3] D Pvag_1427 rstA; Probable transcriptional regulator K07661 rstA; two-component system, OmpR family, response regulator RstA D Pvag_0196 htrA; protease DO precursor K04771 degP; serine protease Do [EC:3.4.21.107] D Pvag_2000 baeS; sensor protein (for BaeR) K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3] D Pvag_2001 baeR; Probable transcriptional regulator K07664 baeR; two-component system, OmpR family, response regulator BaeR D Pvag_1996 yegM; Putative transport protein yegM precursor K07799 mdtA; membrane fusion protein, multidrug efflux system D Pvag_3704 Putative RND efflux system, membrane-fusion protein K07799 mdtA; membrane fusion protein, multidrug efflux system D Pvag_1997 yegN; Putative transport protein yegN K07788 mdtB; multidrug efflux pump D Pvag_3705 Putative RND efflux system, transporter protein K07788 mdtB; multidrug efflux pump D Pvag_1998 yegO; Putative transport protein yegO K07789 mdtC; multidrug efflux pump D Pvag_3706 Putative RND efflux system, transporter protein K07789 mdtC; multidrug efflux pump D Pvag_1999 yegB; Putative transport protein K18326 mdtD; MFS transporter, DHA2 family, multidrug resistance protein D Pvag_2227 acrb3; Multidrug resistance protein K18324 acrD; multidrug efflux pump D Pvag_1736 basS; two-component sensor kinase K07643 basS; two-component system, OmpR family, sensor histidine kinase BasS [EC:2.7.13.3] D Pvag_1735 basR; Transcriptional regulatory protein basR/pmrA K07771 basR; two-component system, OmpR family, response regulator BasR D Pvag_pPag10072 yfbE; UDP-4-amino-4-deoxy-L-arabinose--oxoglutarateaminotransferase K07806 arnB; UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase [EC:2.6.1.87] D Pvag_3247 ygiY; probable two-component system sensor histidine kinase K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] D Pvag_3246 ygiX; Transcriptional regulatory protein qseB K07666 qseB; two-component system, OmpR family, response regulator QseB D Pvag_1731 flhD; Transcriptional activator flhD K02403 flhD; flagellar transcriptional activator FlhD D Pvag_1730 flhC; Flagellar transcriptional activator flhC K02402 flhC; flagellar transcriptional activator FlhC D Pvag_1760 fliC; Flagellin (Flagellin core protein) K02406 fliC; flagellin D Pvag_pPag10122 fliC; Flagellin K02406 fliC; flagellin D Pvag_1756 fliA; RNA polymerase sigma factor for flagellar operon K02405 fliA; RNA polymerase sigma factor FliA D Pvag_1729 motA; Chemotaxis protein motA (Motility protein A) K02556 motA; chemotaxis protein MotA D Pvag_3065 kdpD; sensor protein KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D Pvag_0530 kdpE; Alkaline phosphatase synthesis transcriptional regulatory protein sphR K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D Pvag_3068 kdpA; ATPase of high-affinity potassium transport system, A chain K01546 kdpA; potassium-transporting ATPase potassium-binding subunit D Pvag_3067 kdpB; potassium-transporting ATPase, B subunit K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6] D Pvag_3066 kdpC; P-type ATPase, high-affinity potassium transport system, C chain K01548 kdpC; potassium-transporting ATPase KdpC subunit D Pvag_3069 hypothetical protein K01545 kdpF; potassium-transporting ATPase KdpF subunit D Pvag_3628 arcB; aerobic respiration control sensor protein K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3] D Pvag_0060 arcA; Transcriptional regulatory protein yycF K07773 arcA; two-component system, OmpR family, aerobic respiration control protein ArcA D Pvag_3309 dnaA; Chromosomal replication initiator protein dnaA K02313 dnaA; chromosomal replication initiator protein D Pvag_0447 vanX; D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D Pvag_3666 fepA; ferrienterobactin receptor precursor fepA K19611 fepA; ferric enterobactin receptor D Pvag_pPag30358 fepA; TonB-dependent outer membrane siderophore receptor precursor K19611 fepA; ferric enterobactin receptor D Pvag_pPag30234 dcuS; putative 2-component sensor protein K07701 dcuS; two-component system, CitB family, sensor histidine kinase DcuS [EC:2.7.13.3] D Pvag_pPag30233 dcuR; Putative two-component response regulator K07703 dcuR; two-component system, CitB family, response regulator DcuR D Pvag_2021 sfcA; NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D Pvag_2177 ypdA; putative sensor protein K27884 pyrS; two-component system, LytTR family, high-concentration pyruvate sensor kinase [EC:2.7.13.3] D Pvag_2178 ypdB; Uncharacterized response regulatory protein K27885 pyrR; two-component system, LytTR family, high-concentration pyruvate response regulator D Pvag_2167 yhjX; Major facilitator superfamily protein yhjX K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter D Pvag_2335 oxlT; Putative MFS family transporter K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter D Pvag_2415 narL; Nitrate/nitrite response regulator protein K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL D Pvag_2225 narQ; sensor for nitrate reductase system K07674 narQ; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarQ [EC:2.7.13.3] D Pvag_2226 narP; Nitrate/nitrite response regulator protein narP K07685 narP; two-component system, NarL family, nitrate/nitrite response regulator NarP D Pvag_2413 narG; nitrate reductase alpha chain K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-] D Pvag_2412 narH; nitrate reductase beta chain K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-] D Pvag_2410 narI; respiratory nitrate reductase 1 gamma chain K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-] D Pvag_2411 narJ; respiratory nitrate reductase 1 delta chain K00373 narJ; nitrate reductase molybdenum cofactor assembly chaperone NarJ/NarW D Pvag_3327 fdnG; formate dehydrogenase, major subunit (formate dehydrogenase alpha subunit) K08348 fdnG; formate dehydrogenase-N, alpha subunit [EC:1.17.5.3] D Pvag_0227 rcsF; Protein rcsF K06080 rcsF; RcsF protein D Pvag_2084 rcsC; two component sensor kinase/response regulator protein RcsC K07677 rcsC; two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:2.7.13.3] D Pvag_2082 yojN; putative two-component system sensor kinase K07676 rcsD; two-component system, NarL family, sensor histidine kinase RcsD [EC:2.7.13.3] D Pvag_1799 rcsA; Capsular biosynthesis activation protein A K07781 rcsA; LuxR family transcriptional regulator, capsular biosynthesis positive transcription factor D Pvag_2083 rcsB; Capsule synthesis two component response regulator rcsB K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB D Pvag_2463 barA; hybrid sensory histidine kinase K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3] D Pvag_0813 uvrY; putative 2-component transcriptional regulator K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY D Pvag_0810 phzR; Transcriptional activator protein phzR K07782 sdiA; LuxR family transcriptional regulator, quorum-sensing system regulator SdiA D Pvag_2401 csrA; Carbon storage regulator K03563 csrA; carbon storage regulator D Pvag_0572 sensory box histidine kinase/response regulator K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3] D Pvag_0573 fimZ; Fimbriae Z protein K07688 fimZ; two-component system, NarL family, response regulator, fimbrial Z protein, FimZ D Pvag_1365 ampC; beta-lactamase K01467 ampC; beta-lactamase class C [EC:3.5.2.6] D Pvag_2623 csuA; hypothetical protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D Pvag_2624 csuB; hypothetical protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D Pvag_2627 csuE; hypothetical protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D Pvag_2625 mrkB; Chaperone protein mrkB precursor K07346 fimC; fimbrial chaperone protein D Pvag_pPag20201 fimC; Uncharacterized fimbrial chaperone yraI precursor K07346 fimC; fimbrial chaperone protein D Pvag_pPag30166 yraI; Chaperone protein fimC precursor K07346 fimC; fimbrial chaperone protein D Pvag_1344 stbC; Outer membrane usher protein fimD precursor K07347 fimD; outer membrane usher protein D Pvag_2626 csuD; Outer membrane usher protein fimD precursor K07347 fimD; outer membrane usher protein D Pvag_3600 fimD; Outer membrane usher protein fimD precursor K07347 fimD; outer membrane usher protein D Pvag_pPag10091 fimD; Outer membrane usher protein fimD precursor K07347 fimD; outer membrane usher protein D Pvag_pPag20200 bcfC; Outer membrane usher protein fimD precursor K07347 fimD; outer membrane usher protein D Pvag_pPag30167 yraJ; Outer membrane usher protein fimD precursor K07347 fimD; outer membrane usher protein D Pvag_0200 glnD; protein PII uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59] D Pvag_2300 glnB; Nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1 D Pvag_3224 glnL; histidine protein kinase sensor for GlnG regulator (nitrogen regulator II, NRII) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D Pvag_3225 glnG; Transcriptional regulatory protein glnG K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG D Pvag_3223 glnA; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Pvag_3368 dctA; C4-dicarboxylate transport protein K11103 dctA; aerobic C4-dicarboxylate transport protein D Pvag_3634 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor D Pvag_2304 yfhK; two-component system sensor kinase K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3] D Pvag_2302 yfhA; putative 2-component transcriptional regulator yfhA K07715 glrR; two-component system, NtrC family, response regulator GlrR D Pvag_1722 cheR; chemotaxis protein methyltransferase cheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Pvag_0291 tse1; Methyl-accepting chemotaxis serine transducer K03406 mcp; methyl-accepting chemotaxis protein D Pvag_0630 tar1; Methyl-accepting chemotaxis protein I K03406 mcp; methyl-accepting chemotaxis protein D Pvag_1107 Biofilm dispersion protein bdlA K03406 mcp; methyl-accepting chemotaxis protein D Pvag_1111 tse3; Methyl-accepting chemotaxis serine transducer K03406 mcp; methyl-accepting chemotaxis protein D Pvag_1203 tsr1; Methyl-accepting chemotaxis protein IV K03406 mcp; methyl-accepting chemotaxis protein D Pvag_1413 trg1; Methyl-accepting chemotaxis protein III K03406 mcp; methyl-accepting chemotaxis protein D Pvag_2599 Biofilm dispersion protein bdlA K03406 mcp; methyl-accepting chemotaxis protein D Pvag_2781 tar; Methyl-accepting chemotaxis protein mcpA (H1) K03406 mcp; methyl-accepting chemotaxis protein D Pvag_pPag10014 tar3; Laminin-like protein epi-1 precursor K03406 mcp; methyl-accepting chemotaxis protein D Pvag_pPag10136 tcp; Aerotaxis receptor K03406 mcp; methyl-accepting chemotaxis protein D Pvag_pPag20061 Methyl-accepting chemotaxis protein III K03406 mcp; methyl-accepting chemotaxis protein D Pvag_pPag30079 tse; Methyl-accepting chemotaxis serine transducer K03406 mcp; methyl-accepting chemotaxis protein D Pvag_pPag30137 tsr; Methyl-accepting chemotaxis protein I K03406 mcp; methyl-accepting chemotaxis protein D Pvag_pPag30316 HTH-type transcriptional regulator K03406 mcp; methyl-accepting chemotaxis protein D Pvag_pPag30481 Putative sensory transducer protein K03406 mcp; methyl-accepting chemotaxis protein D Pvag_1723 tsr3; Methyl-accepting chemotaxis signal transducer K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D Pvag_1724 tsr5; Methyl-accepting chemotaxis protein I K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D Pvag_1725 tsr7; Methyl-accepting chemotaxis protein IV K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D Pvag_2761 tse5; Methyl-accepting chemotaxis serine transducer K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D Pvag_1911 tar3; Methyl-accepting chemotaxis citrate transducer K05875 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor D Pvag_pPag20206 trg; Methyl-accepting chemotaxis citrate transducer K05875 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor D Pvag_1475 trg3; Methyl-accepting chemotaxis protein I K05876 trg; methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor D Pvag_1800 trg5; Methyl-accepting chemotaxis protein III K05876 trg; methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor D Pvag_3553 tse7; Methyl-accepting chemotaxis serine transducer K03776 aer; aerotaxis receptor D Pvag_1726 cheW; Chemotaxis protein cheW K03408 cheW; purine-binding chemotaxis protein CheW D Pvag_1727 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Pvag_1720 cheY; Chemotaxis protein cheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Pvag_1721 cheB; Chemotaxis response regulator, CheB type K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Pvag_0292 cheV; putative chemotaxis signal transduction protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D Pvag_2631 dctP; TRAP transporter solute receptor, DctP family K11688 dctP; TRAP-type transport system periplasmic protein D Pvag_2632 dctQ; Putative TRAP transporter small permease protein dctQ K11689 dctQ; TRAP-type transport system small permease protein D Pvag_2633 dctM; TRAP transporter, DctM subunit K11690 dctM; TRAP-type transport system large permease protein D Pvag_0498 gltL; ATP-binding protein of glutamate/aspartate transport system K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1] D Pvag_0499 gltK; Glutamate/aspartate transport system permease protein gltK K10002 gltK; glutamate/aspartate transport system permease protein D Pvag_0500 gltJ; Glutamate/aspartate transport system permease protein gltJ K10003 gltJ; glutamate/aspartate transport system permease protein D Pvag_0501 ybeJ; Glutamate/aspartate transport system, periplasmic-binding protein precursor K10001 gltI; glutamate/aspartate transport system substrate-binding protein D Pvag_2920 crp; Catabolite protein activator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Pvag_1482 rpfF; RpfF protein K13816 rpfF; DSF synthase D Pvag_pPag30181 yneH; putative glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D Pvag_0552 cydA; cytochrome d ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D Pvag_2591 cioA; probable terminal oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D Pvag_0553 cydb1; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D Pvag_2590 cydb3; probable terminal oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D Pvag_0554 hypothetical protein K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7] D Pvag_2650 tolC; Outer membrane protein tolC precursor K12340 tolC; outer membrane protein D Pvag_pPag10094 Putative efflux pump outer membrane protein precursor K12340 tolC; outer membrane protein D Pvag_1984 wza; Polysaccharide export protein precursor K01991 wza; polysaccharide biosynthesis/export protein D Pvag_1983 wzb; Low molecular weight protein-tyrosine-phosphatase wzb K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48] D Pvag_1982 wzc; putative tyrosine-protein kinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3] D Pvag_3385 wecB; UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D Pvag_3386 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336] D Pvag_0811 phzI; Autoinducer synthesis protein phzI K13061 rhlI; acyl homoserine lactone synthase [EC:2.3.1.184] D Pvag_0873 flgM; Negative regulator of flagellin synthesis K02398 flgM; negative regulator of flagellin synthesis FlgM C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04082 Neuroactive ligand signaling C 04081 Hormone signaling C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecule (CAM) interaction C 04517 IgSF CAM signaling C 04518 Integrin signaling C 04519 Cadherin signaling # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagocytosis C 04142 Lysosome biogenesis D Pvag_0619 bcc1; beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] C 04146 Peroxisome [PATH:pva04146] D Pvag_1575 fadD; acyl-CoA synthetase (long-chain-fatty-acid--CoA ligase) K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D Pvag_3475 yjaD; NADH pyrophosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22] D Pvag_0940 icdA; isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D Pvag_1204 katE; Catalase K03781 katE; catalase [EC:1.11.1.6] D Pvag_1181 sodC; copper-zinc superoxide dismutase K04565 SOD1; superoxide dismutase, Cu-Zn family [EC:1.15.1.1] D Pvag_3332 sodA; superoxide dismutase, manganese K04564 SOD2; superoxide dismutase, Fe-Mn family [EC:1.15.1.1] C 04149 Peroxisome - yeast C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis D Pvag_2577 speF; ornithine decarboxylase isozyme K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence C 04156 Integrated stress response (ISR) signaling pathway [PATH:pva04156] D Pvag_0414 htpG; Chaperone protein htpG K04079 HSP90A; molecular chaperone HtpG D Pvag_0511 tRNA-Met K14230 tRNA-Met; tRNA Met D Pvag_0515 tRNA-Met K14230 tRNA-Met; tRNA Met D Pvag_2486 tRNA-Met K14230 tRNA-Met; tRNA Met D Pvag_2487 tRNA-Met K14230 tRNA-Met; tRNA Met D Pvag_2488 tRNA-Met K14230 tRNA-Met; tRNA Met D Pvag_2672 tRNA-Met K14230 tRNA-Met; tRNA Met D Pvag_3676 tRNA-Met K14230 tRNA-Met; tRNA Met D Pvag_0071 dnaK; Chaperone protein dnaK K04043 dnaK; molecular chaperone DnaK D Pvag_3611 groEL; 60 kDa chaperonin (groEL protein) K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Pvag_1082 chaC; Cation transport protein chaC K07232 CHAC; glutathione-specific gamma-glutamylcyclotransferase [EC:4.3.2.7] B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:pva02024] D Pvag_2393 luxS; S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21] D Pvag_2792 hfq; Protein hfq K03666 hfq; host factor-I protein D Pvag_1504 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D Pvag_1505 trpG; anthranilate phosphoribosyltransferase / anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D Pvag_0811 phzI; Autoinducer synthesis protein phzI K13061 rhlI; acyl homoserine lactone synthase [EC:2.3.1.184] D Pvag_1963 rfbF; dTDP-rhamnosyl transferase K12990 rfbF; rhamnosyltransferase [EC:2.4.1.-] D Pvag_0575 aroG; phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D Pvag_1148 aroH; phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D Pvag_2384 aroF; phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D Pvag_3247 ygiY; probable two-component system sensor histidine kinase K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] D Pvag_3246 ygiX; Transcriptional regulatory protein qseB K07666 qseB; two-component system, OmpR family, response regulator QseB D Pvag_2304 yfhK; two-component system sensor kinase K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3] D Pvag_2302 yfhA; putative 2-component transcriptional regulator yfhA K07715 glrR; two-component system, NtrC family, response regulator GlrR D Pvag_1731 flhD; Transcriptional activator flhD K02403 flhD; flagellar transcriptional activator FlhD D Pvag_1730 flhC; Flagellar transcriptional activator flhC K02402 flhC; flagellar transcriptional activator FlhC D Pvag_0530 kdpE; Alkaline phosphatase synthesis transcriptional regulatory protein sphR K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D Pvag_0810 phzR; Transcriptional activator protein phzR K07782 sdiA; LuxR family transcriptional regulator, quorum-sensing system regulator SdiA D Pvag_2244 putative ABC transport system, periplasmic solute-binding protein precursor K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D Pvag_3507 Uncharacterized protein precursor K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D Pvag_2242 putative ABC transport system, permease component K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D Pvag_2243 putative ABC transport system, inner membrane component K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D Pvag_3504 Putative ABC transport system, permease protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D Pvag_3505 Putative ABC transport system, permease protein K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D Pvag_2241 putative ABC transport system, ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D Pvag_3503 Putative ABC transport system, ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D Pvag_3006 livJ; Leu/Ile/Val-binding protein 2 precursor K01999 livK; branched-chain amino acid transport system substrate-binding protein D Pvag_3005 livH; High-affinity branched-chain amino acid transport system permease protein livH K01997 livH; branched-chain amino acid transport system permease protein D Pvag_3004 livM; High-affinity branched-chain amino acid transport system permease protein livM K01998 livM; branched-chain amino acid transport system permease protein D Pvag_3003 livG; high-affinity branched-chain amino acid transport ATP-binding protein livG K01995 livG; branched-chain amino acid transport system ATP-binding protein D Pvag_3002 livF; Phosphate import ATP-binding protein pstB K01996 livF; branched-chain amino acid transport system ATP-binding protein D Pvag_pPag30142 pagI; Autoinducer synthesis protein PagI K22956 expI; acyl homoserine lactone synthase [EC:2.3.1.184] D Pvag_pPag30141 pagR; Transcriptional activator protein PagR K19734 expR; LuxR family transcriptional regulator, quorum-sensing system regulator ExpR D Pvag_1799 rcsA; Capsular biosynthesis activation protein A K07781 rcsA; LuxR family transcriptional regulator, capsular biosynthesis positive transcription factor D Pvag_1482 rpfF; RpfF protein K13816 rpfF; DSF synthase D Pvag_1481 yciR; Uncharacterized protein yciR K14051 gmr; c-di-GMP phosphodiesterase Gmr [EC:3.1.4.52] D Pvag_2078 Putative AT-2 family transporter precursor K20276 bapA; large repetitive protein D Pvag_1575 fadD; acyl-CoA synthetase (long-chain-fatty-acid--CoA ligase) K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D Pvag_2920 crp; Catabolite protein activator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Pvag_3517 perR; Peroxide-responsive repressor perR K09823 zur; Fur family transcriptional regulator, zinc uptake regulator D Pvag_1491 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D Pvag_0353 ribD; bifunctional pyrimidine deaminase/reductase in pathway of riboflavin synthesis K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D Pvag_pPag30072 ydcZ; Inner membrane protein ydcZ K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D Pvag_0830 oprM; Probable RND efflux system, outer membrane protein precursor K18139 oprM; outer membrane protein, multidrug efflux system D Pvag_3707 putative RND efflux system, outer membrane protein precursor K18139 oprM; outer membrane protein, multidrug efflux system D Pvag_pPag30418 ibeB; putative RND efflux system, outer membrane lipoprotein precursor K18139 oprM; outer membrane protein, multidrug efflux system D Pvag_1447 mppA; Periplasmic murein peptide-binding protein precursor K15580 oppA; oligopeptide transport system substrate-binding protein D Pvag_1528 oppA2; Periplasmic oligopeptide-binding protein precursor K15580 oppA; oligopeptide transport system substrate-binding protein D Pvag_1529 oppA1; Periplasmic oligopeptide-binding protein precursor K15580 oppA; oligopeptide transport system substrate-binding protein D Pvag_1527 oppb3; Oligopeptide transport system permease protein oppB K15581 oppB; oligopeptide transport system permease protein D Pvag_1526 oppc3; Oligopeptide transport system permease protein oppC K15582 oppC; oligopeptide transport system permease protein D Pvag_1525 oppd3; Oligopeptide transport ATP-binding protein oppD K15583 oppD; oligopeptide transport system ATP-binding protein D Pvag_1524 oppf3; Oligopeptide transport ATP-binding protein oppF K10823 oppF; oligopeptide transport system ATP-binding protein D Pvag_1316 oppa3; putative ABC transport system, periplasmic substrate-binding protein precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Pvag_1885 ophA; Putative ABC transport system, periplasmic solute-binding protein precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Pvag_1919 oppa5; putative ABC transport system periplasmic substrate-binding protein oppA precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Pvag_2346 ddpA; Putative ABC transporter, periplasmic transport protein precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Pvag_3736 Putative ABC transport system, periplasmic solute-binding protein precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Pvag_pPag30343 Putative ABC transport system, periplasmic solute-binding protein precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Pvag_1315 oppb1; putative ABC transport system, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein D Pvag_1884 ophB; Putative ABC transport system, permease component K02033 ABC.PE.P; peptide/nickel transport system permease protein D Pvag_1920 oppb5; Putative ABC transport system permease protein oppB K02033 ABC.PE.P; peptide/nickel transport system permease protein D Pvag_2347 dppb1; Putative ABC transporter, inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein D Pvag_pPag30344 Putative ABC transport system, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein D Pvag_1314 oppc1; putative ABC transport system, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Pvag_1883 ophC; Putative ABC transport system, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Pvag_1921 oppc5; putative ABC transport system permease protein oppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Pvag_2348 dppc1; Putative ABC transporter, inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Pvag_pPag30346 Putative ABC transport system, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Pvag_1313 oppd1; putative ABC transport system, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D Pvag_1882 ophD; Putative ABC transport system, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D Pvag_1922 oppd5; putative ABC transport system ATP-binding protein oppD K02031 ddpD; peptide/nickel transport system ATP-binding protein D Pvag_2349 dppd1; Putative ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D Pvag_pPag30347 Putative ABC transport system, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D Pvag_1312 oppf1; putative ABC transport system, ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D Pvag_1923 oppf5; putative ABC transport system ATP-binding protein oppF K02032 ddpF; peptide/nickel transport system ATP-binding protein D Pvag_2350 dppf1; Putative ABC transporter, ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D Pvag_3313 yidC; Inner membrane protein yidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D Pvag_3461 secE; Preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D Pvag_3674 secG; Protein-export membrane protein secG K03075 secG; preprotein translocase subunit SecG D Pvag_2868 secY; Preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D Pvag_0347 yajC; UPF0092 membrane protein yajC K03210 yajC; preprotein translocase subunit YajC D Pvag_0130 secA; Preprotein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Pvag_3011 ftsY; Cell division protein ftsY K03110 ftsY; fused signal recognition particle receptor D Pvag_3172 secB; Protein-export protein secB K03071 secB; preprotein translocase subunit SecB D Pvag_2390 ffh; Signal recognition 54 kDa protein (SRP54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis [PATH:pva02030] D Pvag_0291 tse1; Methyl-accepting chemotaxis serine transducer K03406 mcp; methyl-accepting chemotaxis protein D Pvag_0630 tar1; Methyl-accepting chemotaxis protein I K03406 mcp; methyl-accepting chemotaxis protein D Pvag_1107 Biofilm dispersion protein bdlA K03406 mcp; methyl-accepting chemotaxis protein D Pvag_1111 tse3; Methyl-accepting chemotaxis serine transducer K03406 mcp; methyl-accepting chemotaxis protein D Pvag_1203 tsr1; Methyl-accepting chemotaxis protein IV K03406 mcp; methyl-accepting chemotaxis protein D Pvag_1413 trg1; Methyl-accepting chemotaxis protein III K03406 mcp; methyl-accepting chemotaxis protein D Pvag_2599 Biofilm dispersion protein bdlA K03406 mcp; methyl-accepting chemotaxis protein D Pvag_2781 tar; Methyl-accepting chemotaxis protein mcpA (H1) K03406 mcp; methyl-accepting chemotaxis protein D Pvag_pPag10014 tar3; Laminin-like protein epi-1 precursor K03406 mcp; methyl-accepting chemotaxis protein D Pvag_pPag10136 tcp; Aerotaxis receptor K03406 mcp; methyl-accepting chemotaxis protein D Pvag_pPag20061 Methyl-accepting chemotaxis protein III K03406 mcp; methyl-accepting chemotaxis protein D Pvag_pPag30079 tse; Methyl-accepting chemotaxis serine transducer K03406 mcp; methyl-accepting chemotaxis protein D Pvag_pPag30137 tsr; Methyl-accepting chemotaxis protein I K03406 mcp; methyl-accepting chemotaxis protein D Pvag_pPag30316 HTH-type transcriptional regulator K03406 mcp; methyl-accepting chemotaxis protein D Pvag_pPag30481 Putative sensory transducer protein K03406 mcp; methyl-accepting chemotaxis protein D Pvag_1723 tsr3; Methyl-accepting chemotaxis signal transducer K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D Pvag_1724 tsr5; Methyl-accepting chemotaxis protein I K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D Pvag_1725 tsr7; Methyl-accepting chemotaxis protein IV K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D Pvag_2761 tse5; Methyl-accepting chemotaxis serine transducer K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D Pvag_1911 tar3; Methyl-accepting chemotaxis citrate transducer K05875 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor D Pvag_pPag20206 trg; Methyl-accepting chemotaxis citrate transducer K05875 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor D Pvag_1475 trg3; Methyl-accepting chemotaxis protein I K05876 trg; methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor D Pvag_1800 trg5; Methyl-accepting chemotaxis protein III K05876 trg; methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor D Pvag_3553 tse7; Methyl-accepting chemotaxis serine transducer K03776 aer; aerotaxis receptor D Pvag_pPag30208 malE; Maltose-binding periplasmic protein precursor K10108 malE; maltose/maltodextrin transport system substrate-binding protein D Pvag_1835 HTH-type transcriptional repressor purR K10439 rbsB; ribose transport system substrate-binding protein D Pvag_3241 rbsB; ABC-type sugar transport system, periplasmic component (rbsB) K10439 rbsB; ribose transport system substrate-binding protein D Pvag_3731 rbsc3; putative ABC transport system, periplasmic substrate-binding protein precursor K10439 rbsB; ribose transport system substrate-binding protein D Pvag_pPag10101 Putative ABC transport system, periplasmic solute-binding protein precursor K10439 rbsB; ribose transport system substrate-binding protein D Pvag_2026 mglB; D-galactose-binding periplasmic protein precursor K10540 mglB; methyl-galactoside transport system substrate-binding protein D Pvag_1408 dppa1; Putative ABC transport system, periplasmic solute-binding protein precursor K12368 dppA; dipeptide transport system substrate-binding protein D Pvag_3347 dppa3; Putative ABC transport system, periplasmic solute-binding protein precursor K12368 dppA; dipeptide transport system substrate-binding protein D Pvag_1727 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Pvag_1726 cheW; Chemotaxis protein cheW K03408 cheW; purine-binding chemotaxis protein CheW D Pvag_1720 cheY; Chemotaxis protein cheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Pvag_1719 cheZ; Chemotaxis protein cheZ K03414 cheZ; chemotaxis protein CheZ D Pvag_pPag30053 cheZ; Methionyl-tRNA synthetase K03414 cheZ; chemotaxis protein CheZ D Pvag_1721 cheB; Chemotaxis response regulator, CheB type K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Pvag_0292 cheV; putative chemotaxis signal transduction protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D Pvag_1722 cheR; chemotaxis protein methyltransferase cheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Pvag_1787 fliG; Flagellar motor switch protein fliG K02410 fliG; flagellar motor switch protein FliG D Pvag_1793 fliM; Flagellar motor switch protein fliM K02416 fliM; flagellar motor switch protein FliM D Pvag_1794 fliN; Flagellar motor switch protein fliN K02417 fliN; flagellar motor switch protein FliN D Pvag_1729 motA; Chemotaxis protein motA (Motility protein A) K02556 motA; chemotaxis protein MotA D Pvag_1728 motB; Chemotaxis protein motB (Motility protein B) K02557 motB; chemotaxis protein MotB C 02040 Flagellar assembly [PATH:pva02040] D Pvag_1785 fliE; Putative lagellar hook-basal body complex protein fliE K02408 fliE; flagellar hook-basal body complex protein FliE D Pvag_1786 fliF; Flagellar M-ring protein K02409 fliF; flagellar M-ring protein FliF D Pvag_1787 fliG; Flagellar motor switch protein fliG K02410 fliG; flagellar motor switch protein FliG D Pvag_1788 fliH; Flagellar assembly protein fliH K02411 fliH; flagellar assembly protein FliH D Pvag_1789 fliI; flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D Pvag_1790 fliJ; Flagellar fliJ protein K02413 fliJ; flagellar protein FliJ D Pvag_1791 fliK; Probable flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK D Pvag_1792 fliL; Flagellar fliL protein K02415 fliL; flagellar protein FliL D Pvag_1793 fliM; Flagellar motor switch protein fliM K02416 fliM; flagellar motor switch protein FliM D Pvag_1794 fliN; Flagellar motor switch protein fliN K02417 fliN; flagellar motor switch protein FliN D Pvag_1795 fliO; Probable flagellar protein fliO K02418 fliO; flagellar protein FliO/FliZ D Pvag_1796 fliP; Flagellar biosynthetic protein fliP K02419 fliP; flagellar biosynthesis protein FliP D Pvag_1797 fliQ; Probable flagellar biosynthetic protein fliQ K02420 fliQ; flagellar biosynthesis protein FliQ D Pvag_1798 fliR; Flagellar biosynthetic protein fliR K02421 fliR; flagellar biosynthesis protein FliR D Pvag_1716 flhE; Flagellar protein flhE precursor K03516 flhE; flagellar protein FlhE D Pvag_1717 flhA; Flagellar biosynthesis protein flhA K02400 flhA; flagellar biosynthesis protein FlhA D Pvag_1718 flhB; Flagellar biosynthetic protein flhB K02401 flhB; flagellar biosynthesis protein FlhB D Pvag_0874 flgA; Flagella basal body P-ring formation protein flgA precursor K02386 flgA; flagellar basal body P-ring formation protein FlgA D Pvag_0875 flgB; Flagellar basal-body rod protein flgB K02387 flgB; flagellar basal-body rod protein FlgB D Pvag_0876 flgC; Flagellar basal-body rod protein flgC K02388 flgC; flagellar basal-body rod protein FlgC D Pvag_0877 flgD; Basal-body rod modification protein flgD K02389 flgD; flagellar basal-body rod modification protein FlgD D Pvag_0878 flgE; Flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE D Pvag_0879 flgF; Flagellar basal-body rod protein flgF K02391 flgF; flagellar basal-body rod protein FlgF D Pvag_0880 flgG; Flagellar basal-body rod protein flgG K02392 flgG; flagellar basal-body rod protein FlgG D Pvag_0881 flgH; Flagellar L-ring protein precursor K02393 flgH; flagellar L-ring protein FlgH D Pvag_0882 flgI; Flagellar P-ring protein precursor K02394 flgI; flagellar P-ring protein FlgI D Pvag_0883 flgJ; flagellar biosynthesis K02395 flgJ; peptidoglycan hydrolase FlgJ D Pvag_0884 flgK; Flagellar hook-associated protein 1 (HAP1) K02396 flgK; flagellar hook-associated protein 1 D Pvag_0885 flgL; Flagellar hook-associated protein 3 (HAP3) K02397 flgL; flagellar hook-associated protein 3 FlgL D Pvag_1760 fliC; Flagellin (Flagellin core protein) K02406 fliC; flagellin D Pvag_pPag10122 fliC; Flagellin K02406 fliC; flagellin D Pvag_1761 fliD; Flagellar hook-associated protein 2 K02407 fliD; flagellar hook-associated protein 2 D Pvag_1762 fliS; Flagellar protein fliS K02422 fliS; flagellar secretion chaperone FliS D Pvag_1763 fliT; Flagellar protein fliT K02423 fliT; flagellar protein FliT D Pvag_1729 motA; Chemotaxis protein motA (Motility protein A) K02556 motA; chemotaxis protein MotA D Pvag_1728 motB; Chemotaxis protein motB (Motility protein B) K02557 motB; chemotaxis protein MotB D Pvag_0873 flgM; Negative regulator of flagellin synthesis K02398 flgM; negative regulator of flagellin synthesis FlgM D Pvag_0872 flgN; Flagella synthesis protein flgN K02399 flgN; flagellar biosynthesis protein FlgN D Pvag_1753 fliY; Putative ABC transport system, periplasmic protein precursor K02424 tcyA; L-cystine transport system substrate-binding protein D Pvag_1755 fliZ; Protein fliZ K02425 fliZ; regulator of sigma S factor FliZ D Pvag_2668 rpoD; RNA polymerase sigma factor rpoD (Sigma-70) K03086 rpoD; RNA polymerase primary sigma factor D Pvag_1731 flhD; Transcriptional activator flhD K02403 flhD; flagellar transcriptional activator FlhD D Pvag_1730 flhC; Flagellar transcriptional activator flhC K02402 flhC; flagellar transcriptional activator FlhC D Pvag_3634 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor D Pvag_1756 fliA; RNA polymerase sigma factor for flagellar operon K02405 fliA; RNA polymerase sigma factor FliA C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D Pvag_0973 eno1; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Pvag_2458 eno3; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagosome formation C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04981 Folate transport and metabolism [PATH:pva04981] D Pvag_2535 ygfa1; Uncharacterized protein K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] D Pvag_0087 folA; dihydrofolate reductase type I K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D Pvag_2298 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Pvag_2500 thyA; thymidylate synthetase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D Pvag_2353 mmuM; homocysteine S-methyltransferase K00547 mmuM; homocysteine S-methyltransferase [EC:2.1.1.10] D Pvag_3492 metH; B12-dependent homocysteine-N5-methyltetrahydrofolate transmethylase, repressor of MetE and MetF K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] C 04980 Cobalamin transport and metabolism D Pvag_3492 metH; B12-dependent homocysteine-N5-methyltetrahydrofolate transmethylase, repressor of MetE and MetF K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation C 04382 Cornified envelope formation D Pvag_0645 huth1; Histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3] D Pvag_0655 huth3; Histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3] B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:pva01501] D Pvag_0755 ompf1; Outer membrane pore protein F precursor K09476 ompF; outer membrane pore protein F D Pvag_1113 ompf3; Outer membrane porin protein precursor K09476 ompF; outer membrane pore protein F D Pvag_2072 ompC; Outer membrane protein C precursor K09475 ompC; outer membrane pore protein C D Pvag_0372 ampG; Putative MFS family transporter ampG K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D Pvag_0909 ycfO; beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D Pvag_pPag30395 ampR5; transcriptional activator ampR K17850 ampR; LysR family transcriptional regulator, regulator of gene expression of beta-lactamase D Pvag_1365 ampC; beta-lactamase K01467 ampC; beta-lactamase class C [EC:3.5.2.6] D Pvag_1447 mppA; Periplasmic murein peptide-binding protein precursor K15580 oppA; oligopeptide transport system substrate-binding protein D Pvag_1528 oppA2; Periplasmic oligopeptide-binding protein precursor K15580 oppA; oligopeptide transport system substrate-binding protein D Pvag_1529 oppA1; Periplasmic oligopeptide-binding protein precursor K15580 oppA; oligopeptide transport system substrate-binding protein D Pvag_1527 oppb3; Oligopeptide transport system permease protein oppB K15581 oppB; oligopeptide transport system permease protein D Pvag_1526 oppc3; Oligopeptide transport system permease protein oppC K15582 oppC; oligopeptide transport system permease protein D Pvag_1525 oppd3; Oligopeptide transport ATP-binding protein oppD K15583 oppD; oligopeptide transport system ATP-binding protein D Pvag_1524 oppf3; Oligopeptide transport ATP-binding protein oppF K10823 oppF; oligopeptide transport system ATP-binding protein D Pvag_pPag30396 bla; beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6] D Pvag_0404 acrA; Acriflavine resistance protein A K03585 acrA; membrane fusion protein, multidrug efflux system D Pvag_pPag30420 hlyD; Putative RND efflux system, periplasmic membrane-fusion protein precursor K03585 acrA; membrane fusion protein, multidrug efflux system D Pvag_0403 acrb1; acriflavine resistance protein B K18138 acrB; multidrug efflux pump D Pvag_pPag10023 Putative RND superfamily transporter K18138 acrB; multidrug efflux pump D Pvag_pPag30419 mexB; Putative RND efflux system, inner membrane transporter component K18138 acrB; multidrug efflux pump D Pvag_0830 oprM; Probable RND efflux system, outer membrane protein precursor K18139 oprM; outer membrane protein, multidrug efflux system D Pvag_3707 putative RND efflux system, outer membrane protein precursor K18139 oprM; outer membrane protein, multidrug efflux system D Pvag_pPag30418 ibeB; putative RND efflux system, outer membrane lipoprotein precursor K18139 oprM; outer membrane protein, multidrug efflux system D Pvag_2650 tolC; Outer membrane protein tolC precursor K12340 tolC; outer membrane protein D Pvag_pPag10094 Putative efflux pump outer membrane protein precursor K12340 tolC; outer membrane protein D Pvag_2943 mrcA; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D Pvag_0490 mrda1; Penicillin-binding protein 2 (PBP-2) K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D Pvag_2600 mrda3; Penicillin-binding protein 2 (PBP-2) K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D Pvag_0115 ftsi1; division specific transpeptidase, penicillin-binding protein 3 re K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D Pvag_3703 ftsi3; Peptidoglycan synthetase ftsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:pva01502] D Pvag_0447 vanX; D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D Pvag_0123 ddlB; D-alanine:D-alanine ligase B K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Pvag_2711 ddlA; D-alanine-D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Pvag_1562 dadX; alanine racemase 2, catabolic K01775 alr; alanine racemase [EC:5.1.1.1] D Pvag_0117 murF; D-alanine:D-alanine-adding enzyme K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D Pvag_0118 mraY; phospho-N-acetylmuramoyl-pentapeptidetransferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D Pvag_0121 murG; UDP-N-acetylglucosamine:N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:pva01503] D Pvag_0933 phoQ; sensor protein kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D Pvag_0934 phoP; Response regulator K07660 phoP; two-component system, OmpR family, response regulator PhoP D Pvag_3345 yhjW; UPF0141 inner membrane protein yhjW K12975 eptB; KDO II ethanolaminephosphotransferase [EC:2.7.8.42] D Pvag_pPag30356 crcA1; Protein crcA K12973 pagP; lipid IVA palmitoyltransferase [EC:2.3.1.251] D Pvag_pPag30521 crcA3; Protein crcA K12973 pagP; lipid IVA palmitoyltransferase [EC:2.3.1.251] D Pvag_pPag10072 yfbE; UDP-4-amino-4-deoxy-L-arabinose--oxoglutarateaminotransferase K07806 arnB; UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase [EC:2.6.1.87] D Pvag_pPag10071 yfbF; putative sugar transferase K10012 arnC; undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [EC:2.4.2.53] D Pvag_pPag10070 yfbG; Bifunctional polymyxin resistance protein arnA K10011 arnA; UDP-4-amino-4-deoxy-L-arabinose formyltransferase / UDP-glucuronic acid dehydrogenase (UDP-4-keto-hexauronic acid decarboxylating) [EC:2.1.2.13 1.1.1.305] D Pvag_pPag10069 pmrJ; Uncharacterized protein yfbH K13014 arnD; undecaprenyl phosphate-alpha-L-ara4FN deformylase [EC:3.5.1.-] D Pvag_pPag10068 yfbI; 4-amino-4-deoxy-L-arabinose transferase K07264 arnT; 4-amino-4-deoxy-L-arabinose transferase [EC:2.4.2.43] D Pvag_pPag10067 Inner membrane protein yfbW K12962 arnE; undecaprenyl phosphate-alpha-L-ara4N flippase subunit ArnE D Pvag_pPag10066 Small multidrug resistance protein K12963 arnF; undecaprenyl phosphate-alpha-L-ara4N flippase subunit ArnF D Pvag_1736 basS; two-component sensor kinase K07643 basS; two-component system, OmpR family, sensor histidine kinase BasS [EC:2.7.13.3] D Pvag_1735 basR; Transcriptional regulatory protein basR/pmrA K07771 basR; two-component system, OmpR family, response regulator BasR D Pvag_1734 yjdB; UPF0141 inner membrane protein yhjW K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43] D Pvag_1463 sapA; Peptide transport periplasmic protein sapA precursor K19226 sapA; cationic peptide transport system substrate-binding protein D Pvag_1464 sapB; Peptide transport system permease protein sapB K19227 sapB; cationic peptide transport system permease protein D Pvag_1468 sapC; Peptide transport system permease protein sapC K19228 sapC; cationic peptide transport system permease protein D Pvag_1469 sapD; Peptide transport system ATP-binding protein sapD K19229 sapD; cationic peptide transport system ATP-binding protein D Pvag_1470 sapF; Peptide transport system ATP-binding protein sapF K19230 sapF; cationic peptide transport system ATP-binding protein D Pvag_3168 cpxA; probable sensor protein (histidine protein kinase), acting on ArcA K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3] D Pvag_3167 cpxr3; Transcriptional regulatory protein srrA K07662 cpxR; two-component system, OmpR family, response regulator CpxR D Pvag_2216 amiA; probable N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Pvag_2489 amic3; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Pvag_2795 amiB; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Pvag_0613 ybiS; Protein erfK/srfK precursor K19236 ldtA_B_C_E; L,D-transpeptidase D Pvag_1160 ycfS; Protein erfK/srfK precursor K19236 ldtA_B_C_E; L,D-transpeptidase D Pvag_0196 htrA; protease DO precursor K04771 degP; serine protease Do [EC:3.4.21.107] D Pvag_3230 dsbA; Thiol:disulfide interchange protein dsbA precursor K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15] D Pvag_2926 ppiA; peptidyl-prolyl cis-trans isomerase A (rotamase A) K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D Pvag_1266 marA; HTH-type transcriptional activator rhaR K13632 marA; AraC family transcriptional regulator, mar-sox-rob regulon activator D Pvag_3571 rama3; Transcriptional activator ramA K13632 marA; AraC family transcriptional regulator, mar-sox-rob regulon activator D Pvag_0404 acrA; Acriflavine resistance protein A K03585 acrA; membrane fusion protein, multidrug efflux system D Pvag_pPag30420 hlyD; Putative RND efflux system, periplasmic membrane-fusion protein precursor K03585 acrA; membrane fusion protein, multidrug efflux system D Pvag_0403 acrb1; acriflavine resistance protein B K18138 acrB; multidrug efflux pump D Pvag_pPag10023 Putative RND superfamily transporter K18138 acrB; multidrug efflux pump D Pvag_pPag30419 mexB; Putative RND efflux system, inner membrane transporter component K18138 acrB; multidrug efflux pump D Pvag_2650 tolC; Outer membrane protein tolC precursor K12340 tolC; outer membrane protein D Pvag_pPag10094 Putative efflux pump outer membrane protein precursor K12340 tolC; outer membrane protein D Pvag_0214 lpxA; UDP-N-acetylglucosamine acetyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:pva01000] C 01001 Protein kinases [BR:pva01001] D Pvag_2344 rIO1; RIO-type serine/threonine protein kinase K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1] D Pvag_1352 hipA; Protein hipA K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D Pvag_1982 wzc; putative tyrosine-protein kinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3] D Pvag_0337 phoR; phosphate regulon sensor protein PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D Pvag_0933 phoQ; sensor protein kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D Pvag_2950 envZ; Osmolarity sensor protein EnvZ K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D Pvag_1428 rstB; two component sensor kinase K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3] D Pvag_3168 cpxA; probable sensor protein (histidine protein kinase), acting on ArcA K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3] D Pvag_2000 baeS; sensor protein (for BaeR) K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3] D Pvag_1736 basS; two-component sensor kinase K07643 basS; two-component system, OmpR family, sensor histidine kinase BasS [EC:2.7.13.3] D Pvag_3247 ygiY; probable two-component system sensor histidine kinase K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] D Pvag_3065 kdpD; sensor protein KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D Pvag_3628 arcB; aerobic respiration control sensor protein K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3] D Pvag_2206 rssA; putative two-component system sensor kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D Pvag_3569 periplasmic sensor signal transduction histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D Pvag_2225 narQ; sensor for nitrate reductase system K07674 narQ; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarQ [EC:2.7.13.3] D Pvag_2082 yojN; putative two-component system sensor kinase K07676 rcsD; two-component system, NarL family, sensor histidine kinase RcsD [EC:2.7.13.3] D Pvag_2084 rcsC; two component sensor kinase/response regulator protein RcsC K07677 rcsC; two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:2.7.13.3] D Pvag_2463 barA; hybrid sensory histidine kinase K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3] D Pvag_0572 sensory box histidine kinase/response regulator K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3] D Pvag_pPag30234 dcuS; putative 2-component sensor protein K07701 dcuS; two-component system, CitB family, sensor histidine kinase DcuS [EC:2.7.13.3] D Pvag_2177 ypdA; putative sensor protein K27884 pyrS; two-component system, LytTR family, high-concentration pyruvate sensor kinase [EC:2.7.13.3] D Pvag_3224 glnL; histidine protein kinase sensor for GlnG regulator (nitrogen regulator II, NRII) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D Pvag_2304 yfhK; two-component system sensor kinase K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3] D Pvag_1727 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:pva01009] D Pvag_1290 pfka1; putative 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Pvag_3162 pfka3; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Pvag_0414 htpG; Chaperone protein htpG K04079 HSP90A; molecular chaperone HtpG D Pvag_1036 Putative type VI secretion system, Serine/threonine protein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] D Pvag_1085 Putative type VI secretion system, Serine/threonine protein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] D Pvag_0036 serB; 3-phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D Pvag_0585 ybhA; Phosphatase ybhA K28853 ybhA; pyridoxal phosphatase [EC:3.1.3.74] D Pvag_3420 yigL; Phosphatase yidA K28854 yigL; sugar-phosphatase / pyridoxal phosphatase [EC:3.1.3.23 3.1.3.74] C 01002 Peptidases and inhibitors [BR:pva01002] D Pvag_0078 lspA; prolipoprotein signal peptidase (SPase II) K03101 lspA; signal peptidase II [EC:3.4.23.36] D Pvag_pPag30480 pgtE; Outer membrane protease K08566 pla; plasminogen activator [EC:3.4.23.48] D Pvag_0541 pcp; putative pyrrolidone-carboxylate peptidase K01304 PGPEP1; pyroglutamyl-peptidase [EC:3.4.19.3] D Pvag_1018 guaa1; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D Pvag_2268 guaa3; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D Pvag_1946 ycjL; probable amidotransferase subunit K09473 puuD; gamma-glutamyl-gamma-aminobutyrate hydrolase [EC:3.5.1.94] D Pvag_pPag10096 cvaB; putative type I secretion system ATPase K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB D Pvag_2050 spr; Lipoprotein spr precursor K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13] D Pvag_1173 ydhO; Uncharacterized protein ydhO precursor K19303 mepH; murein DD-endopeptidase [EC:3.4.-.-] D Pvag_1145 nlpC; lipoprotein precursor K13695 nlpC; probable lipoprotein NlpC D Pvag_2123 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D Pvag_3627 gltB; glutamate synthase (NADPH) large chain K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D Pvag_3266 glmS; glucosamine--fructose-6-phosphate aminotransferase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Pvag_0516 asnB; asparagine synthetase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D Pvag_3695 yhbO; protease I K05520 yhbO; deglycase [EC:3.5.1.124] D Pvag_0363 thiJ; Protein ThiJ K03152 thiJ; protein deglycase [EC:3.5.1.124] D Pvag_pPag30009 Putative amidotransferase of ThiH/PfpI family K18199 inhA; cyclohexyl-isocyanide hydratase [EC:4.2.1.103] D Pvag_0613 ybiS; Protein erfK/srfK precursor K19236 ldtA_B_C_E; L,D-transpeptidase D Pvag_1160 ycfS; Protein erfK/srfK precursor K19236 ldtA_B_C_E; L,D-transpeptidase D Pvag_0751 ycbB; Uncharacterized protein ycbB K21470 ldtD; L,D-transpeptidase D Pvag_0272 yafK; Uncharacterized protein yafK precursor K28919 dpaA; peptidoglycan meso-diaminopimelic acid protein amidase A [EC:3.4.-.-] D Pvag_0304 yprA; Uncharacterized 24.3 kDa protein (URF 1) K07052 K07052; CAAX protease family protein D Pvag_3056 hypothetical protein K07052 K07052; CAAX protease family protein D Pvag_0758 pepN; Aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D Pvag_3054 prlC; oligopeptidase A K01414 prlC; oligopeptidase A [EC:3.4.24.70] D Pvag_1368 dcp; dipeptidyl carboxypeptidase II K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5] D Pvag_0447 vanX; D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D Pvag_2494 ptr; protease III K01407 ptrA; protease III [EC:3.4.24.55] D Pvag_3721 pepA; Leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D Pvag_2288 pepB; peptidase B K07751 pepB; PepB aminopeptidase [EC:3.4.11.23] D Pvag_1280 acdP; renal dipeptidase family protein K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D Pvag_pPag20211 carboxypeptidase G2 K01295 cpg; glutamate carboxypeptidase [EC:3.4.17.11] D Pvag_2229 dapE; N-succinyl-diaminopimelate deacylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D Pvag_3725 arge3; acetylornithine deacetylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D Pvag_0931 pept1; putative peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4] D Pvag_1409 pept3; peptidase T, putative K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4] D Pvag_0277 pepD; aminoacyl-histidine dipeptidase (peptidase D) K01270 pepD; dipeptidase D [EC:3.4.13.-] D Pvag_3565 iaaH; Indole-3-acetyl-aspartic acid hydrolase K12940 abgA; aminobenzoyl-glutamate utilization protein A D Pvag_3564 abgB; hypothetical protein K12941 abgB; aminobenzoyl-glutamate utilization protein B D Pvag_2610 amhX; amidohydrolase amhX K14665 amhX; amidohydrolase [EC:3.5.1.-] D Pvag_0259 amaB; N-carbamyl-L-amino acid amidohydrolase K02083 allC; allantoate deiminase [EC:3.5.3.9] D Pvag_1661 yebA; hypothetical protein K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-] D Pvag_0201 ampM; Methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D Pvag_pPag30423 map; Methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D Pvag_3443 pepQ; proline dipeptidase K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9] D Pvag_2532 pepP; proline aminopeptidase P II K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D Pvag_2451 iap; alkaline phosphatase isozyme conversion, aminopeptidase K09612 iap; alkaline phosphatase isozyme conversion protein [EC:3.4.11.-] D Pvag_1429 ctaQ; putative carboxypeptidase K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19] D Pvag_3671 ftsH; cell division protein ftsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D Pvag_1603 htpX; putative heat shock protein K03799 htpX; heat shock protein HtpX [EC:3.4.24.-] D Pvag_2549 yggG; putative metalloprotease K07387 K07387; metalloprotease [EC:3.4.24.-] D Pvag_2248 yfgC; TPR repeat-containing protein yfgC precursor K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-] D Pvag_0209 yaeL; putative membrane protein K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D Pvag_1059 D-aminopeptidase K16203 dppA1; D-amino peptidase [EC:3.4.11.-] D Pvag_2142 mepA; murein DD-endopeptidase, penicillin-insensitive K07261 mepA; penicillin-insensitive murein DD-endopeptidase [EC:3.4.24.-] D Pvag_1815 yeeI; Uncharacterized protein yeeI K09933 mtfA; MtfA peptidase D Pvag_1432 ydgD; putative protease ydgD precursor K04775 ydgD; protease YdgD [EC:3.4.21.-] D Pvag_0196 htrA; protease DO precursor K04771 degP; serine protease Do [EC:3.4.21.107] D Pvag_3619 degQ; serine endoprotease K04772 degQ; serine protease DegQ [EC:3.4.21.-] D Pvag_3618 degS; periplasmic serine peptidase K04691 hhoB; serine protease DegS [EC:3.4.21.-] D Pvag_1651 ptrB; Protease II K01354 ptrB; oligopeptidase B [EC:3.4.21.83] D Pvag_0487 dacA; D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Pvag_0685 dacC; D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Pvag_1936 dacD; DD-carboxypeptidase, penicillin-binding protein 6B K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Pvag_0617 pbpG; penicillin-binding protein 7 K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-] D Pvag_2220 ampH; Penicillin-binding protein ampH K18988 ampH; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase [EC:3.4.16.4 3.4.21.-] D Pvag_3667 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D Pvag_0377 clpP; ATP-dependent proteolytic subunit of clpA-clpP serine protease, heat shock protein F21.5 K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D Pvag_0379 lonA; ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D Pvag_0777 ycbZ; putative ATP-dependent protease K04770 lonH; Lon-like ATP-dependent protease [EC:3.4.21.-] D Pvag_3514 lexA; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88] D Pvag_1213 umuD; UmuD protein K03503 umuD; DNA polymerase V [EC:3.4.21.-] D Pvag_2316 lepB; Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D Pvag_1604 prc; tail-specific protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D Pvag_1547 sppA; protease IV K04773 sppA; protease IV [EC:3.4.21.-] D Pvag_1497 sohB; putative protease K04774 sohB; serine protease SohB [EC:3.4.21.-] D Pvag_3438 pepE; Peptidase E K05995 pepE; dipeptidase E [EC:3.4.13.21] D Pvag_2964 glpG; Protein glpG K02441 glpG; rhomboid protease GlpG [EC:3.4.21.105] D Pvag_0997 ycgQ; muramoyltetrapeptide carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13] D Pvag_3147 hslV; ATP-dependent protease HslV (heat shock protein) K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] D Pvag_0675 ybiK; putative asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D Pvag_2995 ggt3; gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D Pvag_3340 ggtA; putative gamma-glutamyltranspeptidase precursor K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D Pvag_0252 ggt1; putative gamma-glutamyltranspeptidase K22602 hpxW; oxamate amidohydrolase [EC:3.5.1.126] D Pvag_2002 yegQ; putative protease K08303 prtC; U32 family peptidase [EC:3.4.-.-] D Pvag_3689 yhbV; Uncharacterized protein yhbV K24845 ubiV; 2-(all-trans-polyprenyl)phenol 6-hydroxylase (prephenate) UbiV [EC:1.97.1.15] D Pvag_3690 yhbU; putative collagenase K24844 ubiU; 2-(all-trans-polyprenyl)phenol 6-hydroxylase (prephenate) UbiU [EC:1.97.1.15] D Pvag_2756 pmbA; Protein pmbA K03592 pmbA; PmbA protein D Pvag_2818 tldD; Protein tldD K03568 tldD; TldD protein D Pvag_2285 yfhM; Uncharacterized lipoprotein yfhM precursor K06894 yfhM; alpha-2-macroglobulin D Pvag_2789 hflC; protease specific for phage lambda cII repressor K04087 hflC; modulator of FtsH protease HflC D Pvag_2790 hflK; protease specific for phage lambda cII repressor K04088 hflK; modulator of FtsH protease HflK C 01003 Glycosyltransferases [BR:pva01003] D Pvag_2978 glgA; Glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21] D Pvag_3354 bcsA; cellulose synthase catalytic subunit K00694 bcsA; cellulose synthase (UDP-forming) [EC:2.4.1.12] D Pvag_3364 yhjO; cellulose synthase (UDP-forming) K00694 bcsA; cellulose synthase (UDP-forming) [EC:2.4.1.12] D Pvag_3629 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; peptidoglycan glycosyltransferase [EC:2.4.99.28] D Pvag_2284 pbpC; penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28] D Pvag_0187 mrcB; penicillin-binding protein 1b K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4] D Pvag_2943 mrcA; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D Pvag_0120 ftsW; Cell division protein ftsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28] D Pvag_0489 mrdB; Rod shape-determining protein mrdB K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28] D Pvag_3393 wecG; probable UDP-N-acetyl-D-mannosaminuronic acid transferase K02852 wecG; UDP-N-acetyl-D-mannosaminouronate:lipid I N-acetyl-D-mannosaminouronosyltransferase [EC:2.4.1.180] D Pvag_3391 wecF; 4-alpha-L-fucosyltransferase wecF K12582 wecF; dTDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase [EC:2.4.1.325] D Pvag_3383 wecA; putative undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D Pvag_0854 mdoH; Glucans biosynthesis glucosyltransferase H K03669 mdoH; membrane glycosyltransferase [EC:2.4.1.-] D Pvag_pPag30089 ndvB; cyclic beta 1-2 glucan synthetase K13688 chvB; cyclic beta-1,2-glucan glucanotransferase [EC:2.4.1.397] D Pvag_pPag30174 crtX; Zeaxanthin Glucosyl Transferase K14596 crtX; zeaxanthin glucosyltransferase [EC:2.4.1.276] D Pvag_1732 otsA; Trehalose-6-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347] D Pvag_pPag20219 otsA; alpha,alpha-trehalose-phosphate synthase (UDP-forming) K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347] D Pvag_pPag30401 otsA; alpha,alpha-trehalose-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347] D Pvag_1805 wcaa3; hypothetical protein K13693 gpgS; glucosyl-3-phosphoglycerate synthase [EC:2.4.1.266] D Pvag_1980 wceB; Extracellular polysaccharide biosynthesis glycosyltransferase wceB K16700 amsB; amylovoran/stewartan biosynthesis glycosyltransferase AmsB/CpsE [EC:2.4.-.-] D Pvag_1975 wceK; Extracellular polysaccharide biosynthesis glycosyl transferase wceK K16703 wcaL; colanic acid/amylovoran/stewartan biosynthesis glycosyltransferase WcaL/AmsK/CpsK [EC:2.4.-.-] C 01005 Lipopolysaccharide biosynthesis proteins [BR:pva01005] D Pvag_0214 lpxA; UDP-N-acetylglucosamine acetyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D Pvag_0215 lpxB; Lipid-A-disaccharide synthetase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D Pvag_0127 lpxC; UDP-3-O-acyl N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D Pvag_0212 lpxD; UDP-3-O-(3-hydroxymyristoyl)-glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D Pvag_0436 ybbF; UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D Pvag_0741 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D Pvag_0857 htrB; lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D Pvag_1660 msbB; lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase K02560 lpxM; lauroyl-Kdo2-lipid IVA myristoyltransferase [EC:2.3.1.243] D Pvag_3205 ddg; Lipid A biosynthesis acyltransferase K12974 lpxP; KDO2-lipid IV(A) palmitoleoyltransferase [EC:2.3.1.242] D Pvag_2049 yeiU; Inner membrane protein yeiU K19803 lpxT; Kdo2-lipid A phosphotransferase [EC:2.7.4.29] D Pvag_3190 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D Pvag_pPag10068 yfbI; 4-amino-4-deoxy-L-arabinose transferase K07264 arnT; 4-amino-4-deoxy-L-arabinose transferase [EC:2.4.2.43] D Pvag_pPag30356 crcA1; Protein crcA K12973 pagP; lipid IVA palmitoyltransferase [EC:2.3.1.251] D Pvag_pPag30521 crcA3; Protein crcA K12973 pagP; lipid IVA palmitoyltransferase [EC:2.3.1.251] D Pvag_1734 yjdB; UPF0141 inner membrane protein yhjW K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43] D Pvag_3345 yhjW; UPF0141 inner membrane protein yhjW K12975 eptB; KDO II ethanolaminephosphotransferase [EC:2.7.8.42] D Pvag_1078 kdsA; 2-dehydro-3-deoxyphosphooctulonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D Pvag_0744 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D Pvag_3638 yrbI; putative 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D Pvag_3639 yrbH; putative isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D Pvag_2557 waaB; lipopolysaccharide 1,6-galactosyltransferase K02840 waaB; UDP-D-galactose:(glucosyl)LPS alpha-1,6-D-galactosyltransferase [EC:2.4.1.-] D Pvag_3183 rfaC; lipopolysaccharide heptosyltransferase-1 K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23] D Pvag_3191 kdtX; lipopolysaccharide core biosynthesis glycosyl transferase K12984 waaE; (heptosyl)LPS beta-1,4-glucosyltransferase [EC:2.4.1.-] D Pvag_3182 rfaf3; ADP-heptose--lps heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24] D Pvag_3189 rfaG; probable glycosyltransferase K02844 waaG; UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-] D Pvag_3187 yibD; putative glycosyltransferase K19354 waaH; heptose III glucuronosyltransferase [EC:2.4.1.-] D Pvag_3188 rfaQ; putative lipopolysaccharide core biosynthesis protein K02849 waaQ; lipopolysaccharide heptosyltransferase III [EC:2.4.99.25] D Pvag_0270 gmhA; phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D Pvag_0231 yaeD; putative phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D Pvag_2657 rfaE; ADP-heptose synthase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70] D Pvag_3181 rfaD; ADP-L-glycero-D-mannoheptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20] D Pvag_1963 rfbF; dTDP-rhamnosyl transferase K12990 rfbF; rhamnosyltransferase [EC:2.4.1.-] D Pvag_3392 wzy; putative enterobacterial common antigen polymerase wzy K02853 wzyE; enterobacterial common antigen polymerase [EC:2.4.99.27] D Pvag_1453 gtrb1; bactoprenol glucosyl transferase K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-] D Pvag_1781 gtrb3; bactoprenol glucosyl transferase K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-] D Pvag_3383 wecA; putative undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:pva01011] D Pvag_3647 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Pvag_3452 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D Pvag_0122 murC; L-alanine adding enzyme, UDP-N-acetyl-muramate:alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D Pvag_0119 murD; UDP-N-acetylmuramoylalanine-D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D Pvag_0116 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D Pvag_0123 ddlB; D-alanine:D-alanine ligase B K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Pvag_2711 ddlA; D-alanine-D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Pvag_1562 dadX; alanine racemase 2, catabolic K01775 alr; alanine racemase [EC:5.1.1.1] D Pvag_3122 murI; Glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D Pvag_0997 ycgQ; muramoyltetrapeptide carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13] D Pvag_0118 mraY; phospho-N-acetylmuramoyl-pentapeptidetransferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D Pvag_0121 murG; UDP-N-acetylglucosamine:N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D Pvag_2662 bacA; undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D Pvag_0686 bcrC; Bacitracin transport permease protein BCRC K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D Pvag_0871 mviN; Virulence factor mviN K03980 murJ; putative peptidoglycan lipid II flippase D Pvag_2943 mrcA; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D Pvag_0187 mrcB; penicillin-binding protein 1b K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4] D Pvag_2284 pbpC; penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28] D Pvag_0490 mrda1; Penicillin-binding protein 2 (PBP-2) K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D Pvag_2600 mrda3; Penicillin-binding protein 2 (PBP-2) K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D Pvag_0115 ftsi1; division specific transpeptidase, penicillin-binding protein 3 re K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D Pvag_3703 ftsi3; Peptidoglycan synthetase ftsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D Pvag_0487 dacA; D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Pvag_0685 dacC; D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Pvag_1936 dacD; DD-carboxypeptidase, penicillin-binding protein 6B K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Pvag_3667 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D Pvag_2220 ampH; Penicillin-binding protein ampH K18988 ampH; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase [EC:3.4.16.4 3.4.21.-] D Pvag_0617 pbpG; penicillin-binding protein 7 K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-] D Pvag_3629 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; peptidoglycan glycosyltransferase [EC:2.4.99.28] D Pvag_0120 ftsW; Cell division protein ftsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28] D Pvag_0489 mrdB; Rod shape-determining protein mrdB K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28] D Pvag_0613 ybiS; Protein erfK/srfK precursor K19236 ldtA_B_C_E; L,D-transpeptidase D Pvag_1160 ycfS; Protein erfK/srfK precursor K19236 ldtA_B_C_E; L,D-transpeptidase D Pvag_0751 ycbB; Uncharacterized protein ycbB K21470 ldtD; L,D-transpeptidase D Pvag_0272 yafK; Uncharacterized protein yafK precursor K28919 dpaA; peptidoglycan meso-diaminopimelic acid protein amidase A [EC:3.4.-.-] D Pvag_0447 vanX; D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D Pvag_2142 mepA; murein DD-endopeptidase, penicillin-insensitive K07261 mepA; penicillin-insensitive murein DD-endopeptidase [EC:3.4.24.-] D Pvag_1173 ydhO; Uncharacterized protein ydhO precursor K19303 mepH; murein DD-endopeptidase [EC:3.4.-.-] D Pvag_2050 spr; Lipoprotein spr precursor K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13] D Pvag_1661 yebA; hypothetical protein K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-] D Pvag_0054 slt; soluble lytic murein transglycosylase K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D Pvag_2485 mltA; membrane-bound lytic murein transglycosylase A precursor K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29] D Pvag_2409 mltB; Membrane-bound lytic murein transglycosylase B K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29] D Pvag_2574 mltC; membrane-bound lytic murein transglycosylase C K08306 mltC; peptidoglycan lytic transglycosylase C [EC:4.2.2.29] D Pvag_0239 dniR; membrane-bound lytic murein transglycosylase D precursor K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29] D Pvag_0998 mltE; putative membrane-bound lytic murein transglycosylase E K08308 mltE; peptidoglycan lytic transglycosylase E [EC:4.2.2.29] D Pvag_2306 yfhD; Uncharacterized protein K18691 mltF; peptidoglycan lytic transglycosylase F [EC:4.2.2.29] D Pvag_0898 yceG; putative thymidylate kinase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D Pvag_0488 rlpA; Rare lipoprotein A precursor K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D Pvag_2216 amiA; probable N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Pvag_2489 amic3; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Pvag_2795 amiB; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Pvag_0710 ybjR; N-acetylmuramoyl-L-alanine amidase K11066 amiD; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Pvag_0141 ampD; Protein ampD K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28] D Pvag_1161 lpp; Major outer membrane lipoprotein precursor K06078 lpp; murein lipoprotein C 01004 Lipid biosynthesis proteins [BR:pva01004] D Pvag_0893 fabD; malonyl-CoA-[acyl-carrier-protein] transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D Pvag_0892 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D Pvag_0844 fabF2; putative 3-oxoacyl-(acyl carrier protein) synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D Pvag_2137 fabB; 3-oxoacyl-ACP synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D Pvag_0847 fabF3; putative beta-ketoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D Pvag_0896 fabF; 3-oxoacyl ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D Pvag_pPag10107 fabF; 3-oxoacyl-acyl carrier protein synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D Pvag_0846 fabG2; putative beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Pvag_0894 fabg1; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Pvag_3686 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Pvag_0776 fabA; 3-hydroxydecanoyl-[acyl-carrier-protein]dehydratase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14] D Pvag_0213 fabZ; (3R)-hydroxymyristol acyl carrier protein dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D Pvag_1471 fabI; enoyl-ACP-reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D Pvag_0431 tesA; acyl-CoA thioesterase I K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D Pvag_0393 tesB; acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.20] D Pvag_0383 ybaW; Putative acyl-CoA thioester hydrolase ybaW K12500 tesC; thioesterase III [EC:3.1.2.-] D Pvag_1515 yciA; putative acyl-CoA thioester hydrolase K10806 yciA; acyl-CoA thioesterase [EC:3.1.2.-] D Pvag_3412 yigI; Uncharacterized protein yigI K01073 yigI; acyl-CoA thioesterase [EC:3.1.2.-] D Pvag_3549 acs; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Pvag_1575 fadD; acyl-CoA synthetase (long-chain-fatty-acid--CoA ligase) K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D Pvag_3512 plsB; glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D Pvag_0891 plsX; Fatty acid/phospholipid synthesis protein plsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D Pvag_2664 ygiH; UPF0078 membrane protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Pvag_2639 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins [BR:pva01008] D Pvag_3655 entB; isochorismatase K01252 entB; bifunctional isochorismate lyase / aryl carrier protein [EC:3.3.2.1 6.3.2.14] D Pvag_2066 entD; phosphopantetheinyl transferase entD K02362 entD; enterobactin synthetase component D / holo-[acyl-carrier protein] synthase [EC:6.3.2.14 2.7.8.7] D Pvag_3656 entE; 2,3-dihydroxybenzoate-AMP ligase K02363 entE; 2,3-dihydroxybenzoate---[aryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.71] D Pvag_3663 entF; enterobactin synthetase component F K02364 entF; L-serine---[L-seryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.72] C 01006 Prenyltransferases [BR:pva01006] D Pvag_0360 ispA; geranyltranstransferase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] D Pvag_pPag30175 crtE; geranyltranstransferase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D Pvag_3649 ispB; octaprenyl diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D Pvag_0207 yaeS; undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D Pvag_pPag30171 crtB; prephytoene pyrophosphate synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32] D Pvag_2793 miaA; delta(2)-isopentenylpyrophosphate tRNA-adenosine transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D Pvag_3511 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D Pvag_0367 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] C 01007 Amino acid related enzymes [BR:pva01007] D Pvag_2189 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Pvag_0522 glnS; glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D Pvag_0182 yadB; Glutamyl-tRNA synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D Pvag_1226 tyrS; Tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Pvag_2932 trpS; Tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D Pvag_0438 cysS; Cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D Pvag_1712 argS; Arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Pvag_2017 metG; Methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Pvag_0077 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D Pvag_3719 valS; Valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D Pvag_0496 leuS; Leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Pvag_2514 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D Pvag_1671 aspS; Aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Pvag_0756 asnS; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D Pvag_2278 hisS; Histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D Pvag_3321 glyQ; glycine tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D Pvag_3322 glyS; Glycyl-tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D Pvag_0728 serS; Seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D Pvag_0225 proS; Prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D Pvag_1135 thrS; Threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D Pvag_2402 alaS; Alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Pvag_1139 pheS; phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D Pvag_1140 pheT; phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D Pvag_0754 aspC; aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D Pvag_3293 avtA; valine--pyruvate aminotransferase K00835 avtA; valine--pyruvate aminotransferase [EC:2.6.1.66] D Pvag_2108 yfbQ; putative aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D Pvag_2175 yfdZ; putative aminotransferase K14261 alaC; alanine-synthesizing transaminase [EC:2.6.1.-] D Pvag_3525 tyrB; tyrosine aminotransferase, tyrosine repressible K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D Pvag_0263 ybdL; putative aminotransferase K14287 ybdL; methionine transaminase [EC:2.6.1.88] D Pvag_1411 aromatic aminotransferase K14287 ybdL; methionine transaminase [EC:2.6.1.88] D Pvag_pPag30194 putative aminotransferase K08969 mtnE; L-glutamine---4-(methylsulfanyl)-2-oxobutanoate aminotransferase [EC:2.6.1.117] D Pvag_1953 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Pvag_3180 kbl; 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29] D Pvag_0590 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D Pvag_1710 patB; aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D Pvag_2922 argD; acetylornithine delta-aminotransferase / N-succinyldiaminopimelate aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D Pvag_1114 astC; succinylornithine aminotransferase K00840 astC; succinylornithine aminotransferase [EC:2.6.1.81] D Pvag_1877 gabT; 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D Pvag_pPag30456 gabT; 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D Pvag_pPag30242 dat; diaminobutyrate--2-oxoglutarateaminotransferase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76] D Pvag_0588 bioA; 7,8-diaminopelargonic acid synthetase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D Pvag_0191 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D Pvag_3109 ilvE; branched-chain amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Pvag_0734 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D Pvag_0258 pucG; Aminotransferase class-V K00839 pucG; (S)-ureidoglycine---glyoxylate transaminase [EC:2.6.1.112] D Pvag_pPag10072 yfbE; UDP-4-amino-4-deoxy-L-arabinose--oxoglutarateaminotransferase K07806 arnB; UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase [EC:2.6.1.87] D Pvag_3389 wecE; TDP-4-keto-6-deoxy-D-glucose transaminase K02805 wecE; dTDP-4-amino-4,6-dideoxygalactose transaminase [EC:2.6.1.59] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:pva00194] D Pvag_3264 atpC; membrane-bound ATP synthase, F1 sector, epsilon-subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D Pvag_3263 atpD; membrane-bound ATP synthase, F1 sector, beta-subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D Pvag_3262 atpG; membrane-bound ATP synthase, F1 sector, gamma-subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D Pvag_3261 atpA; membrane-bound ATP synthase, F1 sector, alpha-subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D Pvag_3260 atpH; membrane-bound ATP synthase, F1 sector, delta-subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D Pvag_3259 atpF; ATP synthase subunit B protein K02109 ATPF0B; F-type H+-transporting ATPase subunit b D Pvag_3258 atpE; ATP synthase C chain K02110 ATPF0C; F-type H+-transporting ATPase subunit c D Pvag_3257 atpB; membrane-bound ATP synthase, F0 sector, subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a D Pvag_3256 atpI; ATP synthase protein I K02116 atpI; ATP synthase protein I B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:pva03000] D Pvag_1811 dcm; DNA cytosine methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Pvag_1254 araC; Arabinose operon regulatory protein K02099 araC; AraC family transcriptional regulator, arabinose operon regulatory protein D Pvag_1398 rhaR; HTH-type transcriptional activator rhaR K02854 rhaR; AraC family transcriptional regulator, L-rhamnose operon transcriptional activator RhaR D Pvag_1397 rhaS; HTH-type transcriptional activator rhaS K02855 rhaS; AraC family transcriptional regulator, L-rhamnose operon regulatory protein RhaS D Pvag_3538 soxS; Transcriptional activator of superoxide response regulon soxS K13631 soxS; AraC family transcriptional regulator, mar-sox-rob regulon activator D Pvag_1266 marA; HTH-type transcriptional activator rhaR K13632 marA; AraC family transcriptional regulator, mar-sox-rob regulon activator D Pvag_3571 rama3; Transcriptional activator ramA K13632 marA; AraC family transcriptional regulator, mar-sox-rob regulon activator D Pvag_0058 rob1; Right origin-binding protein K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator D Pvag_2588 rob3; Right origin-binding protein K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator D Pvag_2164 HTH-type transcriptional regulator chbR K07506 K07506; AraC family transcriptional regulator D Pvag_0566 ada; DNA methylation and regulatory protein K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D Pvag_1412 gcvA; Carbapenem-hydrolyzing beta-lactamase transcriptional activator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D Pvag_2480 ampR; HTH-type transcriptional activator ampR K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D Pvag_pPag30286 ampR3; HTH-type transcriptional activator ampR K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D Pvag_3106 ilvY; transcriptional activator protein ilvY K02521 ilvY; LysR family transcriptional regulator, positive regulator for ilvC D Pvag_3424 metR; HTH-type transcriptional regulator metR K03576 metR; LysR family transcriptional regulator, regulator for metE and metH D Pvag_0074 nhaR; Transcriptional activator protein nhaR K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA D Pvag_3128 oxyr3; Hydrogen peroxide-inducible genes activator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D Pvag_2540 iciA; Chromosome initiation inhibitor K05596 argP; LysR family transcriptional regulator, arginine and lysine transport system/DNA replication regulator D Pvag_1494 cysB; HTH-type transcriptional regulator cysB K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator D Pvag_1892 cbl; Probable RuBisCO transcriptional regulator K13635 cbl; LysR family transcriptional regulator, cys regulon transcriptional activator D Pvag_2976 mdcR; Malonate utilization transcriptional regulator, MdcR K13928 mdcR; LysR family transcriptional regulator, malonate utilization transcriptional regulator D Pvag_3566 ydaK; Probable RuBisCO transcriptional regulator K14057 abgR; LysR family transcriptional regulator, regulator of abg operon D Pvag_3588 Uncharacterized HTH-type transcriptional regulator yafC K16135 dmlR; LysR family transcriptional regulator, transcriptional activator for dmlA D Pvag_pPag30395 ampR5; transcriptional activator ampR K17850 ampR; LysR family transcriptional regulator, regulator of gene expression of beta-lactamase D Pvag_1336 Uncharacterized HTH-type transcriptional regulator yhjC K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC D Pvag_1893 nac; Probable RuBisCO transcriptional regulator K19338 nac; LysR family transcriptional regulator, nitrogen assimilation regulatory protein D Pvag_2817 ltrA; Probable HTH-type transcriptional regulator ltrA K21698 aaeR; LysR family transcriptional regulator, transcriptional activator for aaeXAB operon D Pvag_3114 yifA; HTH-type transcriptional regulator hdfR K23773 hdfR; LysR family transcriptional regulator, flagellar master operon regulator D Pvag_0042 deoR; Glycerol-3-phosphate regulon repressor K11534 deoR; DeoR family transcriptional regulator, deoxyribose operon repressor D Pvag_2963 glpr3; Putative glycerol-3-phosphate regulon repressor K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor D Pvag_pPag20077 srlR1; Sorbitol utilization operon repressor K02468 srlR; DeoR family transcriptional regulator, glucitol operon repressor D Pvag_pPag20098 srlR3; repressor of srl operon K02468 srlR; DeoR family transcriptional regulator, glucitol operon repressor D Pvag_1933 laci1; HTH-type transcriptional repressor purR K27069 lacI; LacI family transcriptional regulator, lactose operon repressor D Pvag_pPag30119 ganR; HTH-type transcriptional activator ganR K27069 lacI; LacI family transcriptional regulator, lactose operon repressor D Pvag_0009 purR; purR-like HTH-type transcriptional repressor K02529 galR; LacI family transcriptional regulator, galactose operon repressor D Pvag_0022 ccpA; HTH-type transcriptional repressor purR K02529 galR; LacI family transcriptional regulator, galactose operon repressor D Pvag_2027 mglS; mgl repressor, galactose operon inducer K02529 galR; LacI family transcriptional regulator, galactose operon repressor D Pvag_3045 laci3; HTH-type transcriptional repressor purR K02529 galR; LacI family transcriptional regulator, galactose operon repressor D Pvag_3239 rbsr1; rbsR; ribose operon repressor K02529 galR; LacI family transcriptional regulator, galactose operon repressor D Pvag_3278 xylr3; Xylose operon regulatory protein (repressor) K02529 galR; LacI family transcriptional regulator, galactose operon repressor D Pvag_3287 thuR; HTH-type transcriptional repressor purR K02529 galR; LacI family transcriptional regulator, galactose operon repressor D Pvag_3595 HTH-type transcriptional regulator malR K02529 galR; LacI family transcriptional regulator, galactose operon repressor D Pvag_3701 galR; HTH-type transcriptional regulator galR K02529 galR; LacI family transcriptional regulator, galactose operon repressor D Pvag_3730 rbsr3; HTH-type transcriptional repressor K02529 galR; LacI family transcriptional regulator, galactose operon repressor D Pvag_pPag10078 lacI; HTH-type transcriptional repressor purR K02529 galR; LacI family transcriptional regulator, galactose operon repressor D Pvag_pPag30495 HTH-type transcriptional repressor purR K02529 galR; LacI family transcriptional regulator, galactose operon repressor D Pvag_3288 ptxS; HTH-type transcriptional repressor purR K02525 kdgR; LacI family transcriptional regulator, kdg operon repressor D Pvag_2914 purr3; HTH-type transcriptional repressor purR K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG D Pvag_3145 cytR; HTH-type transcriptional repressor cytR K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG D Pvag_pPag30254 rbsR; HTH-type transcriptional repressor purR K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG D Pvag_0111 fruR; HTH-type transcriptional repressor purR K03435 fruR1; LacI family transcriptional regulator, fructose operon transcriptional repressor D Pvag_pPag10152 scrR; HTH-type transcriptional repressor scrR K03484 scrR; LacI family transcriptional regulator, sucrose operon repressor D Pvag_pPag30435 ascG; HTH-type transcriptional repressor, AscG K03487 ascG; LacI family transcriptional regulator, asc operon repressor D Pvag_1171 purr1; HTH-type transcriptional repressor purR K03604 purR; LacI family transcriptional regulator, purine nucleotide synthesis repressor D Pvag_2990 gntr5; regulator of gluconate (gntUKR) operon K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor D Pvag_1852 phnF; Putative transcriptional regulator of 2-aminoethylphosphonate degradation operons K02043 phnF; GntR family transcriptional regulator, phosphonate transport system regulatory protein D Pvag_0646 hutC; Histidine utilization repressor K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor D Pvag_pPag30335 farR; Fatty acyl-responsive regulator (P30 protein) K11922 mngR; GntR family transcriptional regulator, mannosyl-D-glycerate transport/metabolism system repressor D Pvag_1565 fadR; fatty acid metabolism regulator fadR K03603 fadR; GntR family transcriptional regulator, negative regulator for fad regulon and positive regulator of fabA D Pvag_0146 pdhR; Exu regulon transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D Pvag_2729 exuR; Exu regulon transcriptional regulator K19775 exuR; GntR family transcriptional regulator, hexuronate regulon transcriptional repressor D Pvag_0300 lldR; Putative L-lactate dehydrogenase operon regulatory protein K14348 lldR; GntR family transcriptional regulator, L-lactate dehydrogenase operon regulator D Pvag_0010 mocr1; GntR family regulatory protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D Pvag_2136 mocr3; Probable rhizopine catabolism regulatory protein mocR K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D Pvag_3093 probable transcriptional regulator, GntR family K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D Pvag_pPag30455 mocR; Probable rhizopine catabolism regulatory protein mocR K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D Pvag_2008 ydfH; Uncharacterized HTH-type transcriptional regulator ydhC K22293 rspR; GntR family transcriptional regulator, rspAB operon transcriptional repressor D Pvag_3085 yjjM; Uncharacterized protein yjjM K23015 lgoR; GntR family transcriptional regulator, transcriptional activator for L-galactonate catabolism D Pvag_1614 betI; HTH-type transcriptional regulator betI K02167 betI; TetR/AcrR family transcriptional regulator, transcriptional repressor of bet genes D Pvag_0405 acrR; potential acrAB operon repressor K03577 acrR; TetR/AcrR family transcriptional regulator, acrAB operon repressor D Pvag_3199 ttk; HTH-type protein slmA K05501 slmA; TetR/AcrR family transcriptional regulator D Pvag_0806 ycdC; HTH-type transcriptional regulator rutR K09017 rutR; TetR/AcrR family transcriptional regulator D Pvag_1178 ydhM; Uncharacterized HTH-type transcriptional regulator ydhM K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D Pvag_2670 Uncharacterized HTH-type transcriptional regulator in lacX 3'region K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D Pvag_pPag30026 tetR1; HTH-type protein slmA K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D Pvag_pPag30051 tetR3; Uncharacterized HTH-type transcriptional regulator in lacX 3'region K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D Pvag_pPag30133 tetR5; Uncharacterized HTH-type transcriptional regulator ydhM K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D Pvag_1392 ycfQ; Uncharacterized HTH-type transcriptional regulator ycfQ K22041 comR; TetR/AcrR family transcriptional regulator, copper-responsive repressor D Pvag_3126 yijC; HTH-type transcriptional repressor fabR K22105 fabR; TetR/AcrR family transcriptional regulator, fatty acid biosynthesis regulator D Pvag_3252 asnC; Uncharacterized HTH-type transcriptional regulator K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA D Pvag_0724 lrp3; Leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D Pvag_pPag30096 lrp; Uncharacterized HTH-type transcriptional regulator ybaO K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D Pvag_pPag30136 putR; Proline dehydrogenase transcriptional activator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D Pvag_0388 lrp1; Leucine-responsive regulatory protein K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator D Pvag_0810 phzR; Transcriptional activator protein phzR K07782 sdiA; LuxR family transcriptional regulator, quorum-sensing system regulator SdiA D Pvag_pPag30141 pagR; Transcriptional activator protein PagR K19734 expR; LuxR family transcriptional regulator, quorum-sensing system regulator ExpR D Pvag_1799 rcsA; Capsular biosynthesis activation protein A K07781 rcsA; LuxR family transcriptional regulator, capsular biosynthesis positive transcription factor D Pvag_pPag30215 malT; HTH-type transcriptional regulator malT K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein D Pvag_0827 marr1; Transcriptional regulator slyA K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin D Pvag_1186 slyA; Transcriptional regulator slyA K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin D Pvag_2362 emrR; Transcriptional repressor of emrAB operon K15974 emrR; MarR family transcriptional regulator, negative regulator of the multidrug operon emrRAB D Pvag_pPag30404 hosA; Transcriptional regulator hosA K22489 hosA; MarR family transcriptional regulator, temperature-dependent positive regulator of motility D Pvag_1109 marr3; Organic hydroperoxide resistance transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator D Pvag_3343 ohrR; HTH-type transcriptional regulator sarZ K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator D Pvag_pPag20058 marR; HTH-type transcriptional regulator sarZ K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator D Pvag_0426 cueR; HTH-type transcriptional regulator cueR K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D Pvag_2860 zntR; HTH-type transcriptional regulator zntR K13638 zntR; MerR family transcriptional regulator, Zn(II)-responsive regulator of zntA D Pvag_3539 soxR; Redox-sensitive transcriptional activator soxR K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR D Pvag_0638 yehV; Uncharacterized HTH-type transcriptional regulator ycgE K21972 bluR; MerR family transcriptional regulator, repressor of blue light- and temperature-responsive genes D Pvag_pPag30307 Uncharacterized HTH-type transcriptional regulator ycgE K21972 bluR; MerR family transcriptional regulator, repressor of blue light- and temperature-responsive genes D Pvag_0524 fur; Ferric uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D Pvag_3517 perR; Peroxide-responsive repressor perR K09823 zur; Fur family transcriptional regulator, zinc uptake regulator D Pvag_3491 iclR; Acetate operon repressor K13641 iclR; IclR family transcriptional regulator, acetate operon repressor D Pvag_1601 kdgR; Transcriptional regulator kdgR K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor D Pvag_2920 crp; Catabolite protein activator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Pvag_1419 fnr; Fumarate and nitrate reduction regulatory protein K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D Pvag_2290 yfhP; HTH-type transcriptional regulator iscR K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor D Pvag_2786 yjeB; HTH-type transcriptional repressor nsrR K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor D Pvag_1262 HTH-type transcriptional regulator iscR K19587 oqxR; Rrf2 family transcriptional regulator, repressor of oqxAB D Pvag_1273 ydcN; Uncharacterized HTH-type transcriptional regulator ydcN K23779 sutR; XRE family transcriptional regulator, regulator of sulfur utilization D Pvag_0665 mntR; Transcriptional regulator mntR K11924 mntR; DtxR family transcriptional regulator, manganese transport regulator D Pvag_1656 yebK; Bifunctional protein glk K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator D Pvag_3453 birA; Biotin-(acetyl-CoA carboxylase) ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D Pvag_2836 fis; DNA-binding protein fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D Pvag_0055 trpR; Putative Trp operon repressor K03720 trpR; TrpR family transcriptional regulator, trp operon repressor D Pvag_3648 nlp; Sugar fermentation stimulation protein B K07724 ner; Ner family transcriptional regulator D Pvag_0103 yabN; Putative ABC transport system, solute-binding periplasmic protein yabN K11925 sgrR; SgrR family transcriptional regulator D Pvag_0038 nadR; probable nadAB transcriptional regulator K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22] D Pvag_1351 hypothetical protein K13655 mqsA; HTH-type transcriptional regulator / antitoxin MqsA D Pvag_1947 ycjC; Uncharacterized HTH-type transcriptional regulator ydcN K14056 puuR; HTH-type transcriptional regulator, repressor for puuD D Pvag_1353 hipB; Uncharacterized HTH-type transcriptional regulator ydcN K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB D Pvag_pPag10128 Uncharacterized HTH-type transcriptional regulator ygjM K18831 higA; HTH-type transcriptional regulator / antitoxin HigA D Pvag_pPag30352 ygjM; Uncharacterized HTH-type transcriptional regulator ygjM K18831 higA; HTH-type transcriptional regulator / antitoxin HigA D Pvag_pPag10105 stc; Signal-transduction and transcriptional-control protein K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D Pvag_0197 yaeG; Carbohydrate diacid regulator K02647 cdaR; carbohydrate diacid regulator D Pvag_0581 modE; Transcriptional regulator modE K02019 modE; molybdate transport system regulatory protein D Pvag_3341 yiaG; Uncharacterized HTH-type transcriptional regulator yiaG K07726 K07726; putative transcriptional regulator D Pvag_3758 Putative HTH-type transcriptional regulatory protein K07726 K07726; putative transcriptional regulator D Pvag_pPag30463 Antitoxin higA-2 K07726 K07726; putative transcriptional regulator D Pvag_3140 metJ; Met repressor K03764 metJ; MetJ family transcriptional regulator, methionine regulon repressor D Pvag_1746 putA; 1-pyrroline-5-carboxylate dehydrogenase / proline dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D Pvag_pPag30320 bglG; Cryptic beta-glucoside bgl operon antiterminator K03488 licT; beta-glucoside operon transcriptional antiterminator D Pvag_0374 bolA; Possible regulator of murein genes bolA K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator D Pvag_0946 Probable chromosome-partitioning protein parB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Pvag_2417 parb1; partitioning protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Pvag_pPag10157 parB; Chromosome-partitioning protein parB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Pvag_pPag20007 parB; plasmid partitioning protein parB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Pvag_pPag30530 parB; Plasmid Partition par B protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Pvag_3437 rfaH; Transcription antitermination protein nusG K05785 rfaH; transcriptional antiterminator RfaH D Pvag_2807 argR; Arginine repressor K03402 argR; transcriptional regulator of arginine metabolism D Pvag_0518 nagC; N-acetylglucosamine repressor K02565 nagC; N-acetylglucosamine repressor D Pvag_1385 xylr1; Xylose repressor K15545 mlc; transcriptional regulator of PTS gene D Pvag_3335 mtlR; Mannitol operon repressor K02562 mtlR; mannitol operon repressor D Pvag_pPag30438 Thiamine biosynthesis protein THI22 precursor K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2] D Pvag_1451 tyrR; Regulatory protein TyrR K03721 tyrR; transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport D Pvag_2237 gcvR; Glycine cleavage system transcriptional repressor K03567 gcvR; glycine cleavage system transcriptional repressor D Pvag_1461 nifA; Nif-specific regulatory protein K03974 pspF; psp operon transcriptional activator D Pvag_1458 pspC; Phage shock protein C K03973 pspC; phage shock protein C D Pvag_2562 yqgE; UPF0301 protein K07735 algH; putative transcriptional regulator D Pvag_0183 dksA; DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor D Pvag_0352 ybaD; Transcriptional repressor nrdR K07738 nrdR; transcriptional repressor NrdR D Pvag_0280 crl; Sigma factor-binding protein crl K11926 crl; sigma factor-binding protein Crl D Pvag_0112 mraZ; Protein mraZ K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:pva03021] D Pvag_2863 rpoA; DNA-directed RNA polymerase alpha chain K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D Pvag_3467 rpoB; DNA-directed RNA polymerase beta chain K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D Pvag_3468 rpoC; DNA-directed RNA polymerase beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D Pvag_3212 rpoZ; DNA-directed RNA polymerase omega chain K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D Pvag_2668 rpoD; RNA polymerase sigma factor rpoD (Sigma-70) K03086 rpoD; RNA polymerase primary sigma factor D Pvag_2436 rpoS; RNA polymerase sigma factor rpoD K03087 rpoS; RNA polymerase nonessential primary-like sigma factor D Pvag_2321 rpoE; RNA polymerase sigma factor sigW (Sigma-W factor) K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D Pvag_3008 rpoH; RNA polymerase sigma-32 factor K03089 rpoH; RNA polymerase sigma-32 factor D Pvag_3634 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor D Pvag_1756 fliA; RNA polymerase sigma factor for flagellar operon K02405 fliA; RNA polymerase sigma factor FliA D Pvag_0097 hepA; ATP-dependent helicase HepA K03580 hepA; ATP-dependent helicase HepA [EC:5.6.2.-] D Pvag_3678 nusA; Transcription elongation protein nusA K02600 nusA; transcription termination/antitermination protein NusA D Pvag_0355 nusB; N utilization substance protein B K03625 nusB; transcription antitermination protein NusB D Pvag_3462 nusG; Transcription antitermination protein nusG K02601 nusG; transcription termination/antitermination protein NusG D Pvag_3624 sspA; Stringent starvation protein A K03599 sspA; stringent starvation protein A D Pvag_3625 sspB; Stringent starvation protein B K03600 sspB; stringent starvation protein B D Pvag_2320 rseA; Sigma-E factor negative regulatory protein K03597 rseA; sigma-E factor negative regulatory protein RseA D Pvag_2319 rseB; Sigma-E factor regulatory protein rseB precursor K03598 rseB; sigma-E factor negative regulatory protein RseB D Pvag_2318 rseC; Sigma-E factor regulatory protein rseC K03803 rseC; sigma-E factor negative regulatory protein RseC D Pvag_0183 dksA; DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor D Pvag_3668 greA; Transcription elongation factor greA K03624 greA; transcription elongation factor GreA D Pvag_2954 greB; Transcription elongation factor greB K04760 greB; transcription elongation factor GreB D Pvag_3382 rho; Transcription termination factor rho K03628 rho; transcription termination factor Rho D Pvag_0223 yaeO; Protein rof K19000 rof; Rho-binding antiterminator C 03019 Messenger RNA biogenesis [BR:pva03019] D Pvag_0886 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] D Pvag_2820 cafA; ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-] D Pvag_2315 rnc; RNase III, ds RNA K03685 rnc; ribonuclease III [EC:3.1.26.3] D Pvag_2785 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D Pvag_2802 yjeR; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D Pvag_3380 rhlB; putative ATP-dependent RNA helicase K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7] D Pvag_0609 rhlE; Putative ATP-dependent RNA helicase rhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D Pvag_3685 deaD; Cold-shock DEAD box protein A K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D Pvag_3414 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D Pvag_0973 eno1; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Pvag_2458 eno3; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Pvag_3683 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D Pvag_3382 rho; Transcription termination factor rho K03628 rho; transcription termination factor Rho D Pvag_1290 pfka1; putative 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Pvag_3162 pfka3; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Pvag_0071 dnaK; Chaperone protein dnaK K04043 dnaK; molecular chaperone DnaK D Pvag_3611 groEL; 60 kDa chaperonin (groEL protein) K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Pvag_2792 hfq; Protein hfq K03666 hfq; host factor-I protein D Pvag_2258 ppk; Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D Pvag_0181 pcnB; poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D Pvag_2503 ygdP; putative invasion protein K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D Pvag_2401 csrA; Carbon storage regulator K03563 csrA; carbon storage regulator D Pvag_2825 yhda1; Uncharacterized signaling protein K18765 csrD; RNase E specificity factor CsrD D Pvag_2826 yhda3; Uncharacterized protein yhdA K18765 csrD; RNase E specificity factor CsrD D Pvag_3149 rraA; Regulator of ribonuclease activity A K02553 rraA; regulator of ribonuclease activity A D Pvag_3714 yjgD; Uncharacterized protein yjgD K09893 rraB; regulator of ribonuclease activity B D Pvag_3631 yhbJ; UPF0042 protein yhbJ K06958 rapZ; RNase adapter protein RapZ D Pvag_1433 hrpA; ATP-dependent helicase K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6] D Pvag_0186 hrpB; ATP-dependent RNA helicase hrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6] C 03041 Spliceosome C 03011 Ribosome [BR:pva03011] D Pvag_0737 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D Pvag_0202 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D Pvag_2883 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D Pvag_2864 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D Pvag_2871 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D Pvag_2778 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D Pvag_2897 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D Pvag_2874 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D Pvag_3623 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D Pvag_2890 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D Pvag_2865 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D Pvag_2898 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D Pvag_2866 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D Pvag_2875 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D Pvag_3682 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D Pvag_2389 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D Pvag_2880 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D Pvag_2776 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D Pvag_2885 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D Pvag_0075 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D Pvag_2666 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D Pvag_3464 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D Pvag_2886 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D Pvag_2889 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D Pvag_2888 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D Pvag_2876 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D Pvag_2873 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D Pvag_2775 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D Pvag_3465 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D Pvag_3463 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D Pvag_3466 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D Pvag_3622 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D Pvag_2878 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D Pvag_2869 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D Pvag_2882 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D Pvag_2862 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D Pvag_2872 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D Pvag_2386 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D Pvag_1138 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D Pvag_3650 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D Pvag_2884 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D Pvag_2887 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D Pvag_2877 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D Pvag_3651 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D Pvag_3195 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D Pvag_2881 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D Pvag_2870 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D Pvag_0402 ykgM; putative ribosomal protein K02909 RP-L31; large subunit ribosomal protein L31 D Pvag_3143 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D Pvag_0890 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D Pvag_3194 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D Pvag_3310 rpmH; 50S ribosomal subunit protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D Pvag_1137 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D Pvag_0401 rpmj1; putative 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D Pvag_2867 rpmj3; 50S ribosomal subunit protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D Pvag_2060 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D Pvag_0232 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Pvag_2376 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Pvag_2846 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Pvag_3121 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Pvag_3237 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Pvag_3447 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Pvag_3483 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Pvag_0234 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Pvag_2373 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Pvag_2844 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Pvag_3118 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Pvag_3235 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Pvag_3450 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Pvag_3485 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Pvag_0235 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Pvag_2372 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Pvag_2841 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Pvag_2843 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Pvag_3117 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Pvag_3234 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Pvag_3451 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Pvag_3486 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 03009 Ribosome biogenesis [BR:pva03009] D Pvag_2315 rnc; RNase III, ds RNA K03685 rnc; ribonuclease III [EC:3.1.26.3] D Pvag_2344 rIO1; RIO-type serine/threonine protein kinase K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1] D Pvag_2802 yjeR; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D Pvag_2314 era; GTP-binding protein K03595 era; GTPase D Pvag_3652 yhbZ; Uncharacterized GTP-binding protein K03979 obgE; GTPase [EC:3.6.5.-] D Pvag_0183 dksA; DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor D Pvag_3678 nusA; Transcription elongation protein nusA K02600 nusA; transcription termination/antitermination protein NusA D Pvag_0355 nusB; N utilization substance protein B K03625 nusB; transcription antitermination protein NusB D Pvag_3462 nusG; Transcription antitermination protein nusG K02601 nusG; transcription termination/antitermination protein NusG D Pvag_2058 rsuA; 16S pseudouridylate 516 synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] D Pvag_0091 ksgA; S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D Pvag_2857 sun; Ribosomal RNA small subunit methyltransferase B K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D Pvag_0031 yjjT; ribosomal RNA small subunit methyltransferase K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172] D Pvag_3012 yhhf1; Putative methylase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D Pvag_3013 yhhf3; Putative methylase yhhF K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D Pvag_2560 yggJ; UPF0088 protein yggJ K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D Pvag_1609 yebU; putative rRNA methyltransferase F K11392 rsmF; 16S rRNA (cytosine1407-C5)-methyltransferase [EC:2.1.1.178] D Pvag_3255 gidB; glucose inhibited division protein B K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D Pvag_0113 mraW; S-adenosyl-L-methionine-dependent methyltransferase mraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D Pvag_2737 yraL; UPF0011 protein K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D Pvag_3053 yhiQ; UPF0341 protein K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242] D Pvag_1596 rrmA; 23S rRNA m1G745 methyltransferase K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187] D Pvag_2784 yjfH; hypothetical tRNA/rRNA methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D Pvag_3670 ftsJ; cell division protein K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] D Pvag_0657 ybiN; Bifunctional methyltransferase K06970 rlmF; 23S rRNA (adenine1618-N6)-methyltransferase [EC:2.1.1.181] D Pvag_2718 ygjO; putative ribosomal RNA small subunit methyltransferase D K11391 rlmG; 23S rRNA (guanine1835-N2)-methyltransferase [EC:2.1.1.174] D Pvag_0491 ybeA; UPF0247 protein K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D Pvag_0789 yccW; UPF0064 protein K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D Pvag_3055 yhiR; Uncharacterized protein yhiR K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266] D Pvag_0770 ycbY; UPF0020/UPF0064 protein ycbY K12297 rlmKL; 23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.264 2.1.1.173] D Pvag_2478 ygdE; Putative RNA 2'-O-ribose methyltransferase mtfA K06968 rlmM; 23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:2.1.1.186] D Pvag_2282 yfgB; UPF0063 protein yfgB K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D Pvag_2462 ygcA; putative enzyme K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D Pvag_0701 ybjF; hypothetical RNA methyltransferase ybjF K03212 rumB; 23S rRNA (uracil747-C5)-methyltransferase [EC:2.1.1.189] D Pvag_0096 yabO; ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D Pvag_1912 rluA; ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D Pvag_1500 yciL; ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D Pvag_0887 yceC; putative pseudouridylate synthase K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D Pvag_2379 rluD; ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D Pvag_0939 ymfC; putative ribosomal large subunit pseudouridine synthase K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20] D Pvag_pPag30466 yjbC; pseudouridylate synthase K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21] D Pvag_2365 yfiF; hypothetical protein K03214 yfiF; RNA methyltransferase, TrmH family [EC:2.1.1.-] D Pvag_0033 rimI; acyltransferase for 30S ribosomal subunit protein S18 K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase / [ribosomal protein L31]-L-lysine N-acetyltransferase [EC:2.3.1.266 2.3.1.338] D Pvag_0868 rimJ; Ribosomal-protein-alanine acetyltransferase K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267] D Pvag_0694 rimK; Ribosomal protein S6 modification protein K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-] D Pvag_2388 rimM; 16S rRNA-processing protein rimM K02860 rimM; 16S rRNA processing protein RimM D Pvag_0733 ycaO; UPF0142 protein ycaO K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor D Pvag_2834 prmA; ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] D Pvag_2144 yfcB; putative adenine-specific methylase K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298] D Pvag_0932 ycfD; Uncharacterized protein ycfD K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47] D Pvag_0886 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] D Pvag_2820 cafA; ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-] D Pvag_2563 yqgF; putative Holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D Pvag_0294 dbpA; ATP-dependent RNA helicase dbpA K05591 dbpA; ATP-dependent RNA helicase DbpA [EC:5.6.2.6] D Pvag_3685 deaD; Cold-shock DEAD box protein A K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D Pvag_2324 srmB; ATP-dependent RNA helicase K05590 srmB; ATP-dependent RNA helicase SrmB [EC:5.6.2.7] D Pvag_2803 yjeQ; putative GTPase K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D Pvag_2275 engA; GTP-binding protein engA K03977 engA; GTPase D Pvag_2791 hflX; Probable tRNA modification GTPase trmE K03665 hflX; GTPase D Pvag_2851 yrdC; Uncharacterized protein yrdC K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D Pvag_3213 spoT; guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D Pvag_3680 rbfA; Ribosome-binding factor A K02834 rbfA; ribosome-binding factor A D Pvag_3677 yhbC; UPF0090 protein yhbC K09748 rimP; ribosome maturation factor RimP D Pvag_0440 ybcJ; Uncharacterized protein ybcJ K14761 rlbA; ribosome-associated protein D Pvag_0492 ybeB; Uncharacterized protein ybeB K09710 ybeB; ribosome-associated protein D Pvag_0505 ybeY; Putative metalloprotease K07042 ybeY; probable rRNA maturation factor D Pvag_3669 yhbY; RNA-binding protein K07574 yhbY; RNA-binding protein D Pvag_3334 yibL; Uncharacterized protein yibL K14762 yibL; ribosome-associated protein D Pvag_2757 yjgA; UPF0307 protein K09889 yjgA; ribosome-associated protein D Pvag_0775 rmf; Ribosome modulation factor (Protein E) K03812 rmf; ribosome modulation factor D Pvag_3633 yhbH; Probable sigma(54) modulation protein K05808 hpf; ribosome hibernation promoting factor D Pvag_2381 yfiA; Sigma 54 modulation protein/ribosomal protein S30EA K05809 raiA; ribosome-associated inhibitor A D Pvag_1066 ychF; Putative GTP-binding protein 9 K06942 ychF; ribosome-binding ATPase D Pvag_0889 yceD; Uncharacterized protein yceD (G30K) K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:pva03016] D Pvag_3057 elaC; ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11] D Pvag_2661 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] D Pvag_2189 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Pvag_0225 proS; Prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D Pvag_0077 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D Pvag_0496 leuS; Leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Pvag_2017 metG; Methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Pvag_0522 glnS; glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D Pvag_1712 argS; Arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Pvag_2514 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D Pvag_1671 aspS; Aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Pvag_2402 alaS; Alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Pvag_0756 asnS; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D Pvag_1135 thrS; Threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D Pvag_0728 serS; Seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D Pvag_0438 cysS; Cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D Pvag_3719 valS; Valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D Pvag_2278 hisS; Histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D Pvag_1139 pheS; phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D Pvag_1140 pheT; phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D Pvag_1226 tyrS; Tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Pvag_2932 trpS; Tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D Pvag_3219 yihZ; D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D Pvag_0905 ycfF; Uncharacterized HIT-like protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D Pvag_0507 miaB; UPF0004 protein K06168 CDK5RAP1; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D Pvag_2571 yggH; tRNA (guanine-N7-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D Pvag_0226 yaeB; UPF0066 protein yaeB K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-] D Pvag_2128 truA; pseudouridylate synthase I K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D Pvag_3681 truB; tRNA pseudouridine 5S synthase K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D Pvag_2442 ygbO; putative hydrogenase subunit K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27] D Pvag_2289 yfhO; putative L-cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Pvag_2851 yrdC; Uncharacterized protein yrdC K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D Pvag_2793 miaA; delta(2)-isopentenylpyrophosphate tRNA-adenosine transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D Pvag_3314 thdF; tRNA modification GTPase K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D Pvag_3254 gidA; Glucose-inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D Pvag_2771 cysQ; PAPS (adenosine 3'-phosphate 5'-phosphosulfate) 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D Pvag_3311 rnpA; RNase P, protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D Pvag_1175 rnt; ribonuclease T K03683 rnt; ribonuclease T [EC:3.1.13.-] D Pvag_3201 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56] D Pvag_1478 rnb; exoribonuclease II K01147 rnb; exoribonuclease II [EC:3.1.13.1] D Pvag_1574 rnd; RNase D, processes tRNA precursor K03684 rnd; ribonuclease D [EC:3.1.13.5] D Pvag_0185 yadP; putative 2'-5' RNA ligase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58] D Pvag_0041 yjjK; Putative ABC transport system, ATP-binding protein K06020 ettA; energy-dependent translational throttle protein EttA D Pvag_3321 glyQ; glycine tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D Pvag_3322 glyS; Glycyl-tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D Pvag_0182 yadB; Glutamyl-tRNA synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D Pvag_0423 ybaK; Uncharacterized protein ybaK K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-] D Pvag_1959 yeak1; Uncharacterized protein yeaK K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-] D Pvag_3299 yeak3; Uncharacterized protein yeaK K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-] D Pvag_2307 yfhC; tRNA-specific adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D Pvag_3519 yjbN; tRNA-dihydrouridine synthase A K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-] D Pvag_2835 yhdG; putative dehydrogenase K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D Pvag_0610 yohI; tRNA-dihydrouridine synthase K05541 dusC; tRNA-dihydrouridine synthase C [EC:1.-.-.-] D Pvag_1675 yecO; Ubiquinone/menaquinone biosynthesis methyltransferase ubiE K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-] D Pvag_1676 yecP; 3-demethylubiquinone-9 3-methyltransferase K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-] D Pvag_0747 smtA; S-adenosylmethionine-dependentmethyltransferase K06219 smtA; tRNA 5-carboxymethoxyuridine methyltransferase [EC:2.1.1.-] D Pvag_0061 lasT; putative RNA methyltransferase K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-] D Pvag_3124 trmA; tRNA (uracil-5-)-methyltransferase K00557 trmA; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35] D Pvag_2387 trmD; tRNA methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D Pvag_2365 yfiF; hypothetical protein K03214 yfiF; RNA methyltransferase, TrmH family [EC:2.1.1.-] D Pvag_3214 spoU; putative RNA methylase K00556 trmH; tRNA (guanosine-2'-O-)-methyltransferase [EC:2.1.1.34] D Pvag_2291 yfhQ; putative RNA methyltransferase K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200] D Pvag_3169 yibK; hypothetical protein K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D Pvag_2323 yfiC; Uncharacterized protein K15460 yfiC; tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223] D Pvag_2472 yqcB; tRNA pseudouridine synthase C K06175 truC; tRNA pseudouridine65 synthase [EC:5.4.99.26] D Pvag_0096 yabO; ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D Pvag_1912 rluA; ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D Pvag_0937 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D Pvag_1445 ydaO; UPF0021 protein K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA D Pvag_3018 yhhP; Sulfurtransferase tusA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D Pvag_2899 dsrH; putative intracellular sulfur oxidation protein K07237 tusB; tRNA 2-thiouridine synthesizing protein B D Pvag_2901 dsrE; Putative intracellular sulfur reduction protein K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-] D Pvag_0791 yccK; putative sulfite reductase K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-] D Pvag_2522 ygfZ; tRNA-modifying protein ygfZ K06980 ygfZ; tRNA-modifying protein YgfZ D Pvag_3715 miaE; tRNA-(MS[2]IO[6]A)-hydroxylase K06169 miaE; tRNA 2-(methylsulfanyl)-N6-isopentenyladenosine37 hydroxylase [EC:1.14.99.69] D Pvag_2138 ddpX; UPF0209 protein K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-] D Pvag_0345 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D Pvag_0384 ybaX; Queuosine biosynthesis protein queC 2 K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D Pvag_2456 ygcM; putative 6-pyruvoyl tetrahydrobiopterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D Pvag_2457 ygcF; Uncharacterized protein ygcF K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D Pvag_2475 yqcD; NADPH-dependent 7-cyano-7-deazaguanine reductase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D Pvag_2798 yjeS; Putative electron transport protein yjeS K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6] D Pvag_3041 Uncharacterized protein K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6] D Pvag_0346 tgt; queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D Pvag_0362 thiI; Thiamine biosynthesis protein thiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D Pvag_0221 mesJ; cell cycle protein K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D Pvag_2232 ypfI; Uncharacterized protein ypfI K06957 tmcA; tRNA(Met) cytidine acetyltransferase [EC:2.3.1.193] D Pvag_1577 yeaZ; M22 peptidase yeaZ K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D Pvag_2665 gcp; putative O-sialoglycoprotein endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D Pvag_2796 yjeE; UPF0079 ATP-binding protein yjeE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D Pvag_2484 ygdL; Uncharacterized protein K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase D Pvag_2785 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D Pvag_3683 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D Pvag_2046 mvpA; Uncharacterized protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] C 03012 Translation factors [BR:pva03012] D Pvag_1486 yciH; Uncharacterized protein yciH K03113 EIF1; translation initiation factor 1 D Pvag_3679 infB; Translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D Pvag_1136 infC; Translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D Pvag_2909 yheS; Putative ABC transport system, ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3 D Pvag_0203 tsf; Elongation factor Ts (EF-Ts) K02357 tsf; elongation factor Ts D Pvag_2894 tufb1; elongation factor TU K02358 tuf; elongation factor Tu D Pvag_3460 tufb3; elongation factor Tu K02358 tuf; elongation factor Tu D Pvag_2896 fusA; elongation factor EF-G K02355 fusA; elongation factor G D Pvag_1074 prfA; Peptide chain release factor 1 (RF-1) K02835 prfA; peptide chain release factor 1 D Pvag_0205 frr; Ribosome recycling factor K02838 frr; ribosome recycling factor D Pvag_1075 hemK; possible protoporphyrinogen oxidase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D Pvag_1067 pth; Peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D Pvag_0718 infA; Translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D Pvag_2047 yeiP; putative elongation factor P (EF-P) K02356 efp; elongation factor P D Pvag_3614 efp; Elongation factor P (EF-P) K02356 efp; elongation factor P D Pvag_3617 yjeA; putative lysyl-tRNA synthetase K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-] D Pvag_3613 yjeK; Uncharacterized kamA family protein K19810 epmB; L-lysine 2,3-aminomutase [EC:5.4.3.-] D Pvag_2140 yfcM; Uncharacterized protein yfcM K09906 epmC; elongation factor P hydroxylase [EC:1.14.-.-] D Pvag_2515 prfB; Peptide chain release factor 2 (RF-2) K02836 prfB; peptide chain release factor 2 D Pvag_2609 prfC; Peptide chain release factor 3 (RF-3) K02837 prfC; peptide chain release factor 3 D Pvag_0224 yaeJ; Uncharacterized protein yaeJ K15034 yaeJ; ribosome-associated protein C 03110 Chaperones and folding catalysts [BR:pva03110] D Pvag_0717 clpA; ATP-dependent Clp protease ATP-binding subunit clpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA D Pvag_2377 clpB; Chaperone protein clpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D Pvag_0378 clpX; ATP-dependent Clp protease ATP-binding subunit clpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D Pvag_3148 hslU; ATP-dependent hsl protease ATP-binding subunit hslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU D Pvag_0414 htpG; Chaperone protein htpG K04079 HSP90A; molecular chaperone HtpG D Pvag_0071 dnaK; Chaperone protein dnaK K04043 dnaK; molecular chaperone DnaK D Pvag_1992 yegD; Heat shock 70 kDa protein K04046 yegD; hypothetical chaperone protein D Pvag_3611 groEL; 60 kDa chaperonin (groEL protein) K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Pvag_0072 dnaJ; Chaperone protein dnaJ K03686 dnaJ; molecular chaperone DnaJ D Pvag_0095 djlA; DnaJ-like protein djlA K05801 djlA; DnaJ like chaperone protein D Pvag_2948 yrfI; Putative heat shock protein 33 K04083 hslO; molecular chaperone Hsp33 D Pvag_2328 grpE; Protein grpE (HSP-70 cofactor) K03687 GRPE; molecular chaperone GrpE D Pvag_3301 ibpA; Small heat shock protein ibpB K04080 ibpA; molecular chaperone IbpA D Pvag_pPag10007 ibp; Small heat shock protein ibpB K04080 ibpA; molecular chaperone IbpA D Pvag_2947 yrfH; Heat shock protein 15 K04762 hslR; ribosome-associated heat shock protein Hsp15 D Pvag_3610 groES; 10 kDa chaperonin (groES protein) K04078 groES; chaperonin GroES D Pvag_0196 htrA; protease DO precursor K04771 degP; serine protease Do [EC:3.4.21.107] D Pvag_3671 ftsH; cell division protein ftsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D Pvag_3257 atpB; membrane-bound ATP synthase, F0 sector, subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a D Pvag_2625 mrkB; Chaperone protein mrkB precursor K07346 fimC; fimbrial chaperone protein D Pvag_pPag20201 fimC; Uncharacterized fimbrial chaperone yraI precursor K07346 fimC; fimbrial chaperone protein D Pvag_pPag30166 yraI; Chaperone protein fimC precursor K07346 fimC; fimbrial chaperone protein D Pvag_3172 secB; Protein-export protein secB K03071 secB; preprotein translocase subunit SecB D Pvag_1119 spy; Spheroplast protein Y precursor K06006 cpxP; periplasmic protein CpxP/Spy D Pvag_3166 cpxP; Periplasmic protein cpxP precursor K06006 cpxP; periplasmic protein CpxP/Spy D Pvag_0619 bcc1; beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D Pvag_2926 ppiA; peptidyl-prolyl cis-trans isomerase A (rotamase A) K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D Pvag_0437 ppiB; peptidyl-prolyl cis-trans isomerase B K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D Pvag_0381 ybaU; peptidyl-prolyl cis-trans isomerase D K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8] D Pvag_2903 fkpA; peptidyl-prolyl cis-trans isomerase K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8] D Pvag_2773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase) K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8] D Pvag_0079 slpA; putative FKBX-type 16KD peptidyl-prolyl cis-trans isomerase K03774 slpA; FKBP-type peptidyl-prolyl cis-trans isomerase SlpA [EC:5.2.1.8] D Pvag_2905 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8] D Pvag_3377 Chaperone surA precursor K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] D Pvag_0093 surA; survival protein SurA precursor K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] D Pvag_3381 trxA; Thioredoxin (Trx) K03671 TXN; thioredoxin D Pvag_2366 trxC; putative thioredoxin-like protein K03672 trxC; thioredoxin 2 [EC:1.8.1.8] D Pvag_0429 ybbN; Uncharacterized protein ybbN K05838 ybbN; putative thioredoxin D Pvag_0691 grxA; Glutaredoxin K03674 grxA; glutaredoxin 1 D Pvag_0867 grxB; Glutaredoxin-2 (Grx2) K03675 grxB; glutaredoxin 2 D Pvag_3173 grxC; Glutaredoxin-C6 (Glutaredoxin-C2 1) K03676 grxC; glutaredoxin 3 D Pvag_1174 ydhD; Glutaredoxin-4 (Grx4) (Monothiol glutaredoxin) K07390 grxD; monothiol glutaredoxin D Pvag_3230 dsbA; Thiol:disulfide interchange protein dsbA precursor K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15] D Pvag_1567 dsbB; disulfide bond formation protein B K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9] D Pvag_2517 dsbC; protein disulfide isomerase II K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D Pvag_3605 dsbD; Thiol:disulfide interchange protein K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16] D Pvag_2155 ccmG; Cytochrome c biogenesis protein ccmG K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE C 04131 Membrane trafficking [BR:pva04131] D Pvag_2283 ndk; Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D Pvag_1552 gapA; glyceraldehyde-3-phosphate dehydrogenase A K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Pvag_0576 gpma1; Phosphoglycerate mutase 1 K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D Pvag_0972 gpma3; Phosphoglycerate mutase 1 K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D Pvag_1162 pykF; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Pvag_1657 pykA; pyruvate kinase II K00873 PK; pyruvate kinase [EC:2.7.1.40] D Pvag_0414 htpG; Chaperone protein htpG K04079 HSP90A; molecular chaperone HtpG C 04121 Ubiquitin system [BR:pva04121] C 03051 Proteasome [BR:pva03051] D Pvag_0414 htpG; Chaperone protein htpG K04079 HSP90A; molecular chaperone HtpG C 03032 DNA replication proteins [BR:pva03032] D Pvag_0242 rnhA; Ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D Pvag_1811 dcm; DNA cytosine methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Pvag_3479 hupa3; Integration host factor subunit alpha (IHF-alpha) K05787 hupA; DNA-binding protein HU-alpha D Pvag_0380 hupB; Integration host factor subunit alpha (IHF-alpha) K03530 hupB; DNA-binding protein HU-beta D Pvag_1141 himA; Integration host factor subunit alpha (IHF-alpha) K04764 ihfA; integration host factor subunit alpha D Pvag_0738 himD; Integration host factor subunit alpha (IHF-alpha) K05788 ihfB; integration host factor subunit beta D Pvag_3309 dnaA; Chromosomal replication initiator protein dnaA K02313 dnaA; chromosomal replication initiator protein D Pvag_3522 dnaB; Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D Pvag_3281 dnaC; DNA replication protein dnaC K02315 dnaC; DNA replication protein DnaC D Pvag_2667 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D Pvag_3530 ssb; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D Pvag_0217 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Pvag_3308 dnaN; DNA polymerase III, beta-subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Pvag_3720 holC; DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D Pvag_0494 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Pvag_0900 holB; DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Pvag_0243 dnaQ; DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Pvag_0411 dnaX; DNA polymerase III, tau and gamma subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Pvag_0032 holD; DNA polymerase III, psi subunit K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7] D Pvag_1644 hypothetical protein K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7] D Pvag_1649 holE; DNA polymerase III, theta subunit K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7] D Pvag_0216 rnhB; Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D Pvag_3229 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Pvag_2198 lig; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D Pvag_3210 yicF; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D Pvag_1260 tus; DNA replication terminus site-binding protein K10748 tus; DNA replication terminus site-binding protein D Pvag_2935 dam; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D Pvag_0528 seqA; Negative modulator of initiation of replication seqA K03645 seqA; negative modulator of initiation of replication D Pvag_2250 yfgE; Chromosomal replication initiator protein dnaA K10763 hda; DnaA-homolog protein D Pvag_2085 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D Pvag_3306 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D Pvag_2640 parC; topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D Pvag_2645 parE; putative topoisomerase IV, subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D Pvag_1495 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D Pvag_1545 topB; DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:pva03036] D Pvag_1811 dcm; DNA cytosine methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Pvag_2315 rnc; RNase III, ds RNA K03685 rnc; ribonuclease III [EC:3.1.26.3] D Pvag_0670 stpA; DNA-binding protein stpA (H-NS stpA) K03746 hns; DNA-binding protein H-NS D Pvag_1534 hns; DNA-binding protein H-NS K03746 hns; DNA-binding protein H-NS D Pvag_pPag10030 hns1; DNA-binding protein K03746 hns; DNA-binding protein H-NS D Pvag_pPag10034 hns3; DNA-binding protein K03746 hns; DNA-binding protein H-NS D Pvag_3479 hupa3; Integration host factor subunit alpha (IHF-alpha) K05787 hupA; DNA-binding protein HU-alpha D Pvag_0380 hupB; Integration host factor subunit alpha (IHF-alpha) K03530 hupB; DNA-binding protein HU-beta D Pvag_1141 himA; Integration host factor subunit alpha (IHF-alpha) K04764 ihfA; integration host factor subunit alpha D Pvag_0738 himD; Integration host factor subunit alpha (IHF-alpha) K05788 ihfB; integration host factor subunit beta D Pvag_0058 rob1; Right origin-binding protein K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator D Pvag_2588 rob3; Right origin-binding protein K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator D Pvag_3309 dnaA; Chromosomal replication initiator protein dnaA K02313 dnaA; chromosomal replication initiator protein D Pvag_2740 yraO; hypothetical protein K12961 diaA; DnaA initiator-associating protein D Pvag_0788 Uncharacterized protein yccV K11940 hspQ; heat shock protein HspQ D Pvag_0661 dps; DNA protection during starvation protein K04047 dps; starvation-inducible DNA-binding protein D Pvag_2836 fis; DNA-binding protein fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D Pvag_2792 hfq; Protein hfq K03666 hfq; host factor-I protein D Pvag_2540 iciA; Chromosome initiation inhibitor K05596 argP; LysR family transcriptional regulator, arginine and lysine transport system/DNA replication regulator D Pvag_0724 lrp3; Leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D Pvag_pPag30096 lrp; Uncharacterized HTH-type transcriptional regulator ybaO K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D Pvag_pPag30136 putR; Proline dehydrogenase transcriptional activator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D Pvag_2061 yejK; Nucleoid-associated protein ndpA K06899 ndpA; nucleoid-associated protein D Pvag_0750 mukB; Chromosome partition protein mukB K03632 mukB; chromosome partition protein MukB D Pvag_0749 mukE; Chromosome partition protein mukE K03804 mukE; chromosome partition protein MukE D Pvag_0748 mukF; Chromosome partition protein mukF K03633 mukF; chromosome partition protein MukF D Pvag_0125 ftsA; Cell division protein ftsA K03590 ftsA; cell division protein FtsA D Pvag_2445 ygbQ; Cell division protein ftsB K05589 ftsB; cell division protein FtsB D Pvag_3010 ftsE; cell division ATP-binding protein ftsE K09812 ftsE; cell division transport system ATP-binding protein D Pvag_0115 ftsi1; division specific transpeptidase, penicillin-binding protein 3 re K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D Pvag_3703 ftsi3; Peptidoglycan synthetase ftsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D Pvag_0725 ftsK; DNA translocase ftsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D Pvag_0114 ftsL; Cell division protein ftsL K03586 ftsL; cell division protein FtsL D Pvag_3146 ftsN; Cell division protein FtsN K03591 ftsN; cell division protein FtsN D Pvag_0124 ftsQ; Cell division protein ftsQ K03589 ftsQ; cell division protein FtsQ D Pvag_0120 ftsW; Cell division protein ftsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28] D Pvag_3009 ftsX; cell division membrane protein ftsX K09811 ftsX; cell division transport system permease protein D Pvag_0126 ftsZ; Cell division protein ftsZ K03531 ftsZ; cell division protein FtsZ D Pvag_2199 zipA; Cell division protein zipA K03528 zipA; cell division protein ZipA D Pvag_2534 ygfE; Uncharacterized protein ygfE K09888 zapA; cell division protein ZapA D Pvag_3150 yiiU; Uncharacterized protein yiiU K09892 zapB; cell division protein ZapB D Pvag_0768 ycbW; Uncharacterized protein ycbW K18657 zapC; cell division protein ZapC D Pvag_0134 yacF; UPF0289 protein yacF K18778 zapD; cell division protein ZapD D Pvag_3621 yhcM; hypothetical protein K06916 zapE; cell division protein ZapE D Pvag_2774 ytfB; Uncharacterized protein ytfB K07269 ytfB; cell division protein YtfB D Pvag_2216 amiA; probable N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Pvag_2489 amic3; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Pvag_2795 amiB; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Pvag_0404 acrA; Acriflavine resistance protein A K03585 acrA; membrane fusion protein, multidrug efflux system D Pvag_pPag30420 hlyD; Putative RND efflux system, periplasmic membrane-fusion protein precursor K03585 acrA; membrane fusion protein, multidrug efflux system D Pvag_1571 minC; Septum site-determining protein minC K03610 minC; septum site-determining protein MinC D Pvag_1572 minD; Septum site-determining protein minD K03609 minD; septum site-determining protein MinD D Pvag_1573 minE; cell division topological specificity factor K03608 minE; cell division topological specificity factor D Pvag_0780 sulA; Cell division inhibitor K13053 sulA; cell division inhibitor SulA D Pvag_3199 ttk; HTH-type protein slmA K05501 slmA; TetR/AcrR family transcriptional regulator D Pvag_0528 seqA; Negative modulator of initiation of replication seqA K03645 seqA; negative modulator of initiation of replication D Pvag_2824 mreB; Rod shape-determining protein mreB K03569 mreB; rod shape-determining protein MreB and related proteins D Pvag_2823 mreC; Rod shape-determining protein mreC K03570 mreC; rod shape-determining protein MreC D Pvag_2822 mreD; Rod shape-determining protein mreD K03571 mreD; rod shape-determining protein MreD D Pvag_0489 mrdB; Rod shape-determining protein mrdB K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28] D Pvag_pPag10158 parA; Plasmid partition protein A K03496 parA; chromosome partitioning protein D Pvag_pPag30531 parA; Plasmid segregation protein A K03496 parA; chromosome partitioning protein D Pvag_0946 Probable chromosome-partitioning protein parB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Pvag_2417 parb1; partitioning protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Pvag_pPag10157 parB; Chromosome-partitioning protein parB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Pvag_pPag20007 parB; plasmid partitioning protein parB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Pvag_pPag30530 parB; Plasmid Partition par B protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Pvag_2640 parC; topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D Pvag_2645 parE; putative topoisomerase IV, subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D Pvag_3254 gidA; Glucose-inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D Pvag_3255 gidB; glucose inhibited division protein B K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D Pvag_3406 xerC; Tyrosine recombinase xerC K03733 xerC; integrase/recombinase XerC D Pvag_0968 xerd1; Tyrosine recombinase xerC K04763 xerD; integrase/recombinase XerD D Pvag_2518 xerd3; Tyrosine recombinase xerD K04763 xerD; integrase/recombinase XerD D Pvag_2016 mrp; Protein mrp K03593 mrp; ATP-binding protein involved in chromosome partitioning D Pvag_2924 fic; Cell filamentation protein fic K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D Pvag_3228 yihA; Probable GTP-binding protein engB K03978 engB; GTP-binding protein C 03400 DNA repair and recombination proteins [BR:pva03400] D Pvag_0568 ogt; methylated-DNA--protein-cysteinemethyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D Pvag_0534 phrB; Deoxyribodipyrimidine photolyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D Pvag_2327 ung; uracil-DNA-glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D Pvag_2572 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D Pvag_1234 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D Pvag_0132 mutT; Probable (di)nucleoside polyphosphate hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D Pvag_3198 dut; deoxyuridinetriphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D Pvag_2068 alkB; Alpha-ketoglutarate-dependent dioxygenase alkB K03919 alkB; DNA oxidative demethylase [EC:1.14.11.33] D Pvag_2669 mug; G/U mismatch-specific DNA glycosylase K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28] D Pvag_0976 hypothetical protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D Pvag_0566 ada; DNA methylation and regulatory protein K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D Pvag_3285 tag; putative DNA-3-methyladenine glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D Pvag_3193 mutM; formamidopyrimidine DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D Pvag_0542 nei; endonuclease VIII and DNA N-glycosylase with an AP lyase activity K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18] D Pvag_1543 xthA; Exonuclease III K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2] D Pvag_2040 nfo; Endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D Pvag_3477 nfi; putative endonuclease V K05982 nfi; deoxyribonuclease V [EC:3.1.21.7] D Pvag_2516 recJ; Single-stranded DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Pvag_2198 lig; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D Pvag_3210 yicF; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D Pvag_3229 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Pvag_3529 uvrA; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A D Pvag_pPag10127 uvrA; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A D Pvag_0595 uvrB; UvrABC system protein B K03702 uvrB; excinuclease ABC subunit B D Pvag_0814 uvrC; UvrABC system protein C K03703 uvrC; excinuclease ABC subunit C D Pvag_1120 ydjQ; UvrABC system protein C K05984 cho; excinuclease Cho [EC:3.1.25.-] D Pvag_3408 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Pvag_3467 rpoB; DNA-directed RNA polymerase beta chain K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D Pvag_3468 rpoC; DNA-directed RNA polymerase beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D Pvag_2863 rpoA; DNA-directed RNA polymerase alpha chain K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D Pvag_3212 rpoZ; DNA-directed RNA polymerase omega chain K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D Pvag_0921 mfd; Transcription-repair-coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D Pvag_2435 mutS; DNA mismatch repair protein mutS K03555 mutS; DNA mismatch repair protein MutS D Pvag_2794 mutL; DNA mismatch repair protein mutL K03572 mutL; DNA mismatch repair protein MutL D Pvag_2504 mutH; DNA mismatch repair protein mutH K03573 mutH; DNA mismatch repair protein MutH D Pvag_1937 sbcB; exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1] D Pvag_2270 xseA; Exonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D Pvag_0361 xseB; exonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D Pvag_1650 exoX; exodeoxyribonuclease X K10857 exoX; exodeoxyribonuclease X [EC:3.1.11.-] D Pvag_0217 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Pvag_3308 dnaN; DNA polymerase III, beta-subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Pvag_3720 holC; DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D Pvag_0494 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Pvag_0900 holB; DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Pvag_0243 dnaQ; DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Pvag_0411 dnaX; DNA polymerase III, tau and gamma subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Pvag_0032 holD; DNA polymerase III, psi subunit K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7] D Pvag_1644 hypothetical protein K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7] D Pvag_1649 holE; DNA polymerase III, theta subunit K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7] D Pvag_3530 ssb; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D Pvag_2935 dam; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D Pvag_1810 vsr; DNA mismatch endonuclease, patch repair protein K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-] D Pvag_2493 recB; exodeoxyribonuclease V beta chain K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D Pvag_2495 recC; Exonuclease V gamma subunit K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] D Pvag_2492 recD; exodeoxyribonuclease V alpha chain K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D Pvag_2404 recA; Protein recA (Recombinase A) K03553 recA; recombination protein RecA D Pvag_1666 ruvA; Holliday junction ATP-dependent DNA helicase ruvA K03550 ruvA; holliday junction DNA helicase RuvA D Pvag_1665 ruvB; Holliday junction ATP-dependent DNA helicase ruvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D Pvag_1668 ruvC; crossover junction endodeoxyribonuclease K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D Pvag_3144 priA; Primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D Pvag_2777 priB; Primosomal replication protein N K02686 priB; primosomal replication protein N D Pvag_0408 priC; Primosomal replication protein N'' K04067 priC; primosomal replication protein N'' D Pvag_3282 dnaT; Primosomal protein 1 (Primosomal protein I) K02317 dnaT; DNA replication protein DnaT D Pvag_0334 sbcC; ATP-dependent dsDNA exonuclease K03546 sbcC; DNA repair protein SbcC/Rad50 D Pvag_0335 sbcD; exonuclease SbcD K03547 sbcD; DNA repair protein SbcD/Mre11 D Pvag_0037 sms; DNA repair protein radA K04485 radA; DNA repair protein RadA/Sms D Pvag_3307 recf3; DNA replication and repair protein recF K03629 recF; DNA replication and repair protein RecF D Pvag_2706 recg1; hypothetical protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D Pvag_3215 recg3; ATP-dependent DNA helicase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D Pvag_2313 recO; DNA repair protein recO (Recombination protein O) K03584 recO; DNA repair protein RecO (recombination protein O) D Pvag_0413 recR; Recombination protein recR K06187 recR; recombination protein RecR D Pvag_2330 recN; DNA repair protein recN (Recombination protein N) K03631 recN; DNA repair protein RecN (Recombination protein N) D Pvag_0325 rdgC; Recombination-associated protein rdgC K03554 rdgC; recombination associated protein RdgC D Pvag_2059 yejH; Uncharacterized protein yejH K19789 radD; DNA repair protein RadD D Pvag_3735 yjgR; Uncharacterized protein yjgR K06915 herA; DNA double-strand break repair helicase HerA and related ATPase D Pvag_2085 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D Pvag_3306 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D Pvag_1495 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D Pvag_3479 hupa3; Integration host factor subunit alpha (IHF-alpha) K05787 hupA; DNA-binding protein HU-alpha D Pvag_0380 hupB; Integration host factor subunit alpha (IHF-alpha) K03530 hupB; DNA-binding protein HU-beta D Pvag_2836 fis; DNA-binding protein fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D Pvag_1141 himA; Integration host factor subunit alpha (IHF-alpha) K04764 ihfA; integration host factor subunit alpha D Pvag_0738 himD; Integration host factor subunit alpha (IHF-alpha) K05788 ihfB; integration host factor subunit beta D Pvag_3414 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D Pvag_0670 stpA; DNA-binding protein stpA (H-NS stpA) K03746 hns; DNA-binding protein H-NS D Pvag_1534 hns; DNA-binding protein H-NS K03746 hns; DNA-binding protein H-NS D Pvag_pPag10030 hns1; DNA-binding protein K03746 hns; DNA-binding protein H-NS D Pvag_pPag10034 hns3; DNA-binding protein K03746 hns; DNA-binding protein H-NS D Pvag_0273 dinP; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D Pvag_0979 umuc1; UmuC protein K03502 umuC; DNA polymerase V D Pvag_1214 umuc3; UmuC protein K03502 umuC; DNA polymerase V D Pvag_pPag20186 umuC; Protein umuC K03502 umuC; DNA polymerase V D Pvag_1213 umuD; UmuD protein K03503 umuD; DNA polymerase V [EC:3.4.21.-] D Pvag_3514 lexA; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88] D Pvag_0098 polB; DNA polymerase II K02336 polB; DNA polymerase II [EC:2.7.7.7] D Pvag_0864 dinI; DNA-damage-inducible protein I K12149 dinI; DNA-damage-inducible protein I D Pvag_2403 oraA; Regulatory protein recX K03565 recX; regulatory protein D Pvag_pPag10109 ytl2; hypothetical protein K24087 rpnB; recombination-promoting nuclease RpnB [EC:3.1.21.-] D Pvag_pPag20015 ytl2; hypothetical protein K24087 rpnB; recombination-promoting nuclease RpnB [EC:3.1.21.-] D Pvag_3378 rep; rep helicase, a single-stranded DNA dependent ATPase K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4] D Pvag_0784 helD; putative DNA helicase IV K03658 helD; DNA helicase IV [EC:5.6.2.4] D Pvag_0641 dinG; Probable ATP-dependent helicase dinG K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] D Pvag_1578 yoaA; Probable ATP-dependent helicase dinG K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] D Pvag_pPag30517 lhr; putative ATP-dependent DNA helicase K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] D Pvag_2087 nrdA; ribonucleoside-diphosphate reductase alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Pvag_2359 nrdE; ribonucleoside-diphosphate reductase alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Pvag_2088 nrdB; ribonucleoside-diphosphate reductase 1 beta chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D Pvag_2360 nrdF; ribonucleoside-diphosphate reductase beta chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] C 03029 Mitochondrial biogenesis [BR:pva03029] D Pvag_3679 infB; Translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D Pvag_1136 infC; Translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D Pvag_0203 tsf; Elongation factor Ts (EF-Ts) K02357 tsf; elongation factor Ts D Pvag_2894 tufb1; elongation factor TU K02358 tuf; elongation factor Tu D Pvag_3460 tufb3; elongation factor Tu K02358 tuf; elongation factor Tu D Pvag_2896 fusA; elongation factor EF-G K02355 fusA; elongation factor G D Pvag_2314 era; GTP-binding protein K03595 era; GTPase D Pvag_1226 tyrS; Tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Pvag_0496 leuS; Leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Pvag_1671 aspS; Aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Pvag_1712 argS; Arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Pvag_1868 gata3; amidase family protein K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D Pvag_pPag30085 amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D Pvag_3530 ssb; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D Pvag_0210 yaeT; Outer membrane protein assembly factor yaeT precursor K07277 SAM50; outer membrane protein insertion porin family D Pvag_0071 dnaK; Chaperone protein dnaK K04043 dnaK; molecular chaperone DnaK D Pvag_2328 grpE; Protein grpE (HSP-70 cofactor) K03687 GRPE; molecular chaperone GrpE D Pvag_3611 groEL; 60 kDa chaperonin (groEL protein) K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Pvag_3610 groES; 10 kDa chaperonin (groES protein) K04078 groES; chaperonin GroES D Pvag_0072 dnaJ; Chaperone protein dnaJ K03686 dnaJ; molecular chaperone DnaJ D Pvag_2289 yfhO; putative L-cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Pvag_1174 ydhD; Glutaredoxin-4 (Grx4) (Monothiol glutaredoxin) K07390 grxD; monothiol glutaredoxin D Pvag_2016 mrp; Protein mrp K03593 mrp; ATP-binding protein involved in chromosome partitioning D Pvag_0367 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D Pvag_3313 yidC; Inner membrane protein yidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D Pvag_0414 htpG; Chaperone protein htpG K04079 HSP90A; molecular chaperone HtpG B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:pva02000] D Pvag_0740 msba1; Lipid A export ATP-binding/permease protein msbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D Pvag_3371 msba3; Lipid A export ATP-binding/permease protein msbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D Pvag_0389 mdlA; putative ABC superfamily ATP-binding/permease protein mdlA K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump D Pvag_0390 mdlB; putative ABC superfamily ATP-binding/permease protein mdlB K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump D Pvag_pPag10096 cvaB; putative type I secretion system ATPase K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB D Pvag_3075 bapA; Putative ABC transport system, ATP-binding/permease protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump D Pvag_2074 cyab1; Cytoplasmic membrane export protein, ATP-binding protein K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D Pvag_3770 cyab3; putative type I secretion system ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D Pvag_0720 cydC; ATP-binding component of cytochrome-related transport K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC D Pvag_0721 cydD; transport ATP-binding protein cydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD D Pvag_2067 yojI; putative ABC transport system, permease/ATP-binding protein yojI K06159 yojI; multidrug/microcin transport system ATP-binding/permease protein D Pvag_0771 ABC transporter ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein D Pvag_2212 cysP; Thiosulfate-binding protein precursor K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein D Pvag_3161 sbp; Sulfate-binding protein precursor K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D Pvag_2211 cysT; Probable sulfate transport system permease protein cysT K02046 cysU; sulfate/thiosulfate transport system permease protein D Pvag_2210 cysW; Sulfate transport system permease protein cysW K02047 cysW; sulfate/thiosulfate transport system permease protein D Pvag_2209 cysA; ATP-binding component of sulfate permease A protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D Pvag_0582 modA; Molybdate-binding periplasmic protein precursor modA K02020 modA; molybdate transport system substrate-binding protein D Pvag_1301 Putative ABC transport system, periplasmic solute-binding protein precursor K02020 modA; molybdate transport system substrate-binding protein D Pvag_pPag30297 mbp; hypothetical protein K02020 modA; molybdate transport system substrate-binding protein D Pvag_0583 modB; molybdate ABC transporter, permease protein modB K02018 modB; molybdate transport system permease protein D Pvag_0584 modC; molybdenum transport ATP-binding protein modC K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D Pvag_0580 modF; molybdate ABC transporter, ATP-binding protein modF K05776 modF; molybdate transport system ATP-binding protein D Pvag_1092 nasF; Nitrate transport protein nrtA K15576 nrtA; nitrate/nitrite transport system substrate-binding protein D Pvag_1093 nasE; Nitrate transport permease protein nrtB K15577 nrtB; nitrate/nitrite transport system permease protein D Pvag_1094 nasD; nitrate ABC transporter, ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4] D Pvag_2913 tauA; Taurine-binding periplasmic protein precursor K15551 tauA; taurine transport system substrate-binding protein D Pvag_2911 tauC; Taurine transport permease protein tauC K15552 tauC; taurine transport system permease protein D Pvag_2912 tauB; taurine ATP-binding component of a transport system K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7] D Pvag_0762 ssuA; Putative aliphatic sulfonates-binding protein precursor K15553 ssuA; sulfonate transport system substrate-binding protein D Pvag_0760 ssuC; Sulfonate transport permease protein ssuC K15554 ssuC; sulfonate transport system permease protein D Pvag_0759 ssuB; Sulfonate import ATP-binding protein ssuB K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D Pvag_1358 Putative ABC transport system, periplasmic solute-binding protein precursor K02012 afuA; iron(III) transport system substrate-binding protein D Pvag_1357 putative ABC transport system, permease component K02011 afuB; iron(III) transport system permease protein D Pvag_1356 Putative ABC transport system, ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D Pvag_0102 thiB; Thiamine-binding periplasmic protein precursor K02064 thiB; thiamine transport system substrate-binding protein D Pvag_0101 thiP; Thiamine transport system permease protein thiP K02063 thiP; thiamine transport system permease protein D Pvag_0100 thiQ; thiamine ABC transporter, ATP-binding protein thiQ K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15] D Pvag_0927 potD; Spermidine/putrescine-binding periplasmic protein precursor potD K11069 potD; spermidine/putrescine transport system substrate-binding protein D Pvag_0928 potC; Spermidine/putrescine transport system permease protein potC K11070 potC; spermidine/putrescine transport system permease protein D Pvag_0929 potB; Spermidine/putrescine transport system permease protein potB K11071 potB; spermidine/putrescine transport system permease protein D Pvag_0930 potA; ATP-binding component of spermidine/putrescine transport K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D Pvag_0696 potF; Spermidine/putrescine-binding periplasmic protein 2 precursor K11073 potF; putrescine transport system substrate-binding protein D Pvag_0699 potI; Putrescine transport system permease protein potI K11074 potI; putrescine transport system permease protein D Pvag_0698 potH; putrescine transport system permease protein potH K11075 potH; putrescine transport system permease protein D Pvag_0697 potG; ATP-binding component of putrescine transport system K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16] D Pvag_2244 putative ABC transport system, periplasmic solute-binding protein precursor K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D Pvag_3507 Uncharacterized protein precursor K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D Pvag_2242 putative ABC transport system, permease component K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D Pvag_2243 putative ABC transport system, inner membrane component K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D Pvag_3504 Putative ABC transport system, permease protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D Pvag_3505 Putative ABC transport system, permease protein K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D Pvag_2241 putative ABC transport system, ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D Pvag_3503 Putative ABC transport system, ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D Pvag_0633 yehZ; putative ABC transporter, substrate-binding periplasmic protein precursor K05845 opuC; osmoprotectant transport system substrate-binding protein D Pvag_1380 Putative ABC transport system, periplasmic solute-binding protein precursor K05845 opuC; osmoprotectant transport system substrate-binding protein D Pvag_0634 yehY; putative ABC transport system permease protein K05846 opuBD; osmoprotectant transport system permease protein D Pvag_0636 yehW; putative ABC transport system permease protein K05846 opuBD; osmoprotectant transport system permease protein D Pvag_1379 Putative ABC transport system, permease protein K05846 opuBD; osmoprotectant transport system permease protein D Pvag_1381 Putative ABC transport system, permease component K05846 opuBD; osmoprotectant transport system permease protein D Pvag_0635 yehX; putative ABC transporter, ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D Pvag_1382 putative ABC transport system, ATPase component K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D Pvag_pPag30441 Putative ABC transport system, periplasmic solute-binding protein precursor K15598 thiY; putative hydroxymethylpyrimidine transport system substrate-binding protein D Pvag_pPag30440 Putative ABC transport system, permease protein K15599 thiX; putative hydroxymethylpyrimidine transport system permease protein D Pvag_pPag30439 Putative ABC transport system, ATP-binding protein K15600 thiZ; putative hydroxymethylpyrimidine transport system ATP-binding protein D Pvag_pPag30293 Putative ABC transport system, periplasmic solute-binding protein precursor K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D Pvag_pPag30292 Putative ABC transport system, permease protein K02050 ABC.SN.P; NitT/TauT family transport system permease protein D Pvag_pPag30291 Putative ABC transport system, ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D Pvag_pPag30208 malE; Maltose-binding periplasmic protein precursor K10108 malE; maltose/maltodextrin transport system substrate-binding protein D Pvag_pPag30207 malF; Maltose transport system permease protein malF K10109 malF; maltose/maltodextrin transport system permease protein D Pvag_pPag30206 malG; Inner membrane ABC transporter permease protein malG K10110 malG; maltose/maltodextrin transport system permease protein D Pvag_3581 Putative ABC transport system, ATP-binding protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D Pvag_pPag30109 ganK; Putative oligogalactan ABC transporter, ATP-binding protein ganK K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D Pvag_pPag30209 malK; ATP-binding component of transport system for maltose K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D Pvag_pPag30315 Putative ABC transport system, ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D Pvag_pPag30110 ganE; Putative oligogalactan ABC transporter, periplasmic solute-binding protein ganE K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein D Pvag_pPag30111 ganF; Putative oligogalactan transport system permease protein ganF K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D Pvag_pPag30112 ganG; Putative oligogalactan ABC transporter, permease protein ganG K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D Pvag_3583 yurO; Putative ABC transport system, periplasmic solute-binding protein precursor yurO K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D Pvag_3584 yurN; Putative ABC transport system, permease protein yurN K10118 msmF; raffinose/stachyose/melibiose transport system permease protein D Pvag_3585 yurM; Putative ABC transport system, permease protein yurM K10119 msmG; raffinose/stachyose/melibiose transport system permease protein D Pvag_1251 araF; L-arabinose-binding periplasmic protein precursor K10537 araF; L-arabinose transport system substrate-binding protein D Pvag_1253 araH; High-affinity L-arabinose transporter, permease protein AraH K10538 araH; L-arabinose transport system permease protein D Pvag_1252 araG; L-arabinose transport ATP-binding protein K10539 araG; L-arabinose transport system ATP-binding protein [EC:7.5.2.12] D Pvag_2026 mglB; D-galactose-binding periplasmic protein precursor K10540 mglB; methyl-galactoside transport system substrate-binding protein D Pvag_2024 mglC; Galactoside transport system permease protein mglC K10541 mglC; methyl-galactoside transport system permease protein D Pvag_2025 mglA; ATP-binding component of methyl-galactoside transport and galactose taxis K10542 mglA; methyl-galactoside transport system ATP-binding protein [EC:7.5.2.11] D Pvag_3275 xylF; D-galactose-binding periplasmic protein precursor K10543 xylF; D-xylose transport system substrate-binding protein D Pvag_3277 xylH; Xylose transport system permease protein xylH K10544 xylH; D-xylose transport system permease protein D Pvag_3276 xylG; ATP-binding protein of xylose transport system K10545 xylG; D-xylose transport system ATP-binding protein [EC:7.5.2.10] D Pvag_1835 HTH-type transcriptional repressor purR K10439 rbsB; ribose transport system substrate-binding protein D Pvag_3241 rbsB; ABC-type sugar transport system, periplasmic component (rbsB) K10439 rbsB; ribose transport system substrate-binding protein D Pvag_3731 rbsc3; putative ABC transport system, periplasmic substrate-binding protein precursor K10439 rbsB; ribose transport system substrate-binding protein D Pvag_pPag10101 Putative ABC transport system, periplasmic solute-binding protein precursor K10439 rbsB; ribose transport system substrate-binding protein D Pvag_1836 putative ABC transport system, permease protein K10440 rbsC; ribose transport system permease protein D Pvag_3242 rbsc1; Ribose transport system permease protein rbsC K10440 rbsC; ribose transport system permease protein D Pvag_3728 Putative ABC transport system, permease protein K10440 rbsC; ribose transport system permease protein D Pvag_1837 putative ABC transport system, ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D Pvag_3243 rbsA; ATP-binding component of D-ribose high-affinity transport system K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D Pvag_3729 putative ABC transport system, ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D Pvag_1244 ytfQ; Putative ABC transport system, periplasmic solute-binding protein precursor K23508 ytfQ; galactofuranose transport system substrate-binding protein D Pvag_1246 ytfT; Putative ABC transport system, permease protein K23509 ytfT; galactofuranose transport system permease protein D Pvag_1247 yjfF; Putative ABC transport system, permease protein K23509 ytfT; galactofuranose transport system permease protein D Pvag_1245 ytfR; Putative ABC transport system, ATP-binding protein K10820 ytfR; galactofuranose transport system ATP-binding protein [EC:7.5.2.9] D Pvag_1000 HTH-type transcriptional repressor purR K17202 eryG; erythritol transport system substrate-binding protein D Pvag_1101 HTH-type transcriptional repressor purR K17202 eryG; erythritol transport system substrate-binding protein D Pvag_1003 putative ABC transport system permease protein K17203 eryF; erythritol transport system permease protein D Pvag_1104 putative ABC transport system permease protein K17203 eryF; erythritol transport system permease protein D Pvag_1002 putative ABC transport system, ATP-binding protein K17204 eryE; erythritol transport system ATP-binding protein D Pvag_1103 putative ABC transport system, ATP-binding protein K17204 eryE; erythritol transport system ATP-binding protein D Pvag_1896 mocB; HTH-type transcriptional repressor purR K17213 K17213; inositol transport system substrate-binding protein D Pvag_3073 Putative ABC transport system, periplasmic solute-binding protein precursor K17213 K17213; inositol transport system substrate-binding protein D Pvag_1894 putative ABC transport system, permease component K17214 K17214; inositol transport system permease protein D Pvag_1895 putative ABC transport system, ATP-binding protein K17215 K17215; inositol transport system ATP-binding protein D Pvag_3001 ugpB; sn-glycerol-3-phosphate-binding periplasmic protein ugpB precursor K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein D Pvag_3000 ugpA; sn-glycerol-3-phosphate transport system permease protein ugpA K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein D Pvag_2999 ugpE; SN-glycerol-3-phosphate transport system permease protein ugpE K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein D Pvag_2998 ugpC; ATP-binding component of sn-glycerol 3-phosphate transport system K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10] D Pvag_pPag30366 ybbM; UPF0014 inner membrane protein ybbM K02069 STAR2; UDP-glucose/iron transport system permease protein D Pvag_pPag30367 ybbL; Putative ABC transport system, ATP-binding protein K02068 STAR1; UDP-glucose/iron transport system ATP-binding protein D Pvag_3643 yrbD; Putative ABC transport system, periplasmic solute-binding protein yrbD precursor K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D Pvag_3642 yrbE; Putative ABC transport system, permease protein yrbE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D Pvag_3641 yrbF; Putative ABC transport system, ATP-binding protein yrbF K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D Pvag_3644 yrbC; Putative ABC-type transport system, auxiliary component yrbC K07323 mlaC; phospholipid transport system substrate-binding protein D Pvag_3645 yrbB; Anti-sigma F factor antagonist K07122 mlaB; phospholipid transport system transporter-binding protein D Pvag_pPag30311 ABC-type sugar transport system, periplasmic component K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D Pvag_pPag30312 ABC-type sugar transport system, permease component K02025 ABC.MS.P; multiple sugar transport system permease protein D Pvag_pPag30313 ABC-type sugar transport system, permease component K02026 ABC.MS.P1; multiple sugar transport system permease protein D Pvag_0274 Putative ABC transport system, periplasmic solute-binding protein precursor K02058 ABC.SS.S; simple sugar transport system substrate-binding protein D Pvag_0275 Putative ABC transport system, permease protein K02057 ABC.SS.P; simple sugar transport system permease protein D Pvag_0276 Putative ABC transport system, ATP-binding protein K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-] D Pvag_0338 psts1; Phosphate-binding protein pstS precursor (PBP) K02040 pstS; phosphate transport system substrate-binding protein D Pvag_3267 psts3; Phosphate-binding protein pstS precursor (PBP) K02040 pstS; phosphate transport system substrate-binding protein D Pvag_2257 pstc1; Phosphate transport system permease protein pstC K02037 pstC; phosphate transport system permease protein D Pvag_3268 pstc3; Phosphate transport system permease protein pstC K02037 pstC; phosphate transport system permease protein D Pvag_2256 psta1; Phosphate transport system permease protein pstA K02038 pstA; phosphate transport system permease protein D Pvag_3269 psta3; Phosphate transport system permease protein pstA K02038 pstA; phosphate transport system permease protein D Pvag_2255 pstb1; Phosphate import ATP-binding protein pstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D Pvag_3270 pstb3; phosphate transport ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D Pvag_1841 phnD; Phosphonate ABC transporter, periplasmic component K02044 phnD; phosphonate transport system substrate-binding protein D Pvag_1839 phnE; Phosphonates transport system permease protein phnE K02042 phnE; phosphonate transport system permease protein D Pvag_1840 ptxc3; Phosphite/phosphonate transport system permease protein K02042 phnE; phosphonate transport system permease protein D Pvag_1842 phnC; Phosphonates import ATP-binding protein phnC K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2] D Pvag_1410 Putative ABC transport system, periplasmic solute-binding protein precursor K10013 argT; lysine/arginine/ornithine transport system substrate-binding protein D Pvag_1960 Putative ABC transport system, periplasmic solute-binding protein precursor K10013 argT; lysine/arginine/ornithine transport system substrate-binding protein D Pvag_pPag30283 Putative ABC transport system, periplasmic solute-binding protein precursor K10013 argT; lysine/arginine/ornithine transport system substrate-binding protein D Pvag_2119 hisM; Histidine transport system, permease component K10015 hisM; histidine transport system permease protein D Pvag_2120 hisQ; Histidine transport system permease protein K10016 hisQ; histidine transport system permease protein D Pvag_2118 hisP; ATP-binding component of histidine transport K10017 hisP; histidine transport system ATP-binding protein [EC:7.4.2.1] D Pvag_2121 argT; Lysine-arginine-ornithine-binding periplasmic protein precursor K10014 hisJ; histidine transport system substrate-binding protein D Pvag_0660 glnh1; Glutamine-binding periplasmic protein precursor glnH K10036 glnH; glutamine transport system substrate-binding protein D Pvag_1683 glnh3; Glutamine-binding periplasmic protein precursor K10036 glnH; glutamine transport system substrate-binding protein D Pvag_0659 glnp1; Glutamine transport system permease protein glnP K10037 glnP; glutamine transport system permease protein D Pvag_1682 glnp3; Putative glutamine transport system permease protein glnP K10037 glnP; glutamine transport system permease protein D Pvag_0658 glnq1; Glutamine transport ATP-binding protein glnQ K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1] D Pvag_1681 glnq3; putative glutamine transport ATP-binding protein GlnQ K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1] D Pvag_0702 artJ; Arginine-binding periplasmic protein 2 precursor K09996 artJ; arginine transport system substrate-binding protein D Pvag_0705 artI; Arginine-binding periplasmic protein precursor K09997 artI; arginine transport system substrate-binding protein D Pvag_0703 artM; Arginine transport system permease protein artM K09998 artM; arginine transport system permease protein D Pvag_0704 artQ; Arginine transport system permease protein artQ K09999 artQ; arginine transport system permease protein D Pvag_0706 artP; ATP-binding component of arginine transport system K10000 artP; arginine transport system ATP-binding protein [EC:7.4.2.1] D Pvag_0501 ybeJ; Glutamate/aspartate transport system, periplasmic-binding protein precursor K10001 gltI; glutamate/aspartate transport system substrate-binding protein D Pvag_0499 gltK; Glutamate/aspartate transport system permease protein gltK K10002 gltK; glutamate/aspartate transport system permease protein D Pvag_0500 gltJ; Glutamate/aspartate transport system permease protein gltJ K10003 gltJ; glutamate/aspartate transport system permease protein D Pvag_0498 gltL; ATP-binding protein of glutamate/aspartate transport system K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1] D Pvag_0651 Putative ABC transport system, substrate-binding periplasmic protein precursor K10018 occT; octopine/nopaline transport system substrate-binding protein D Pvag_pPag30021 putative ABC transport system, periplasmic ligand binding protein K10018 occT; octopine/nopaline transport system substrate-binding protein D Pvag_0653 putative ABC transport system permease protein K10019 occM; octopine/nopaline transport system permease protein D Pvag_pPag30023 Putative ABC transport system, permease protein K10019 occM; octopine/nopaline transport system permease protein D Pvag_0652 Putative ABC transport system, permease protein K10020 occQ; octopine/nopaline transport system permease protein D Pvag_pPag30022 Putative ABC transport system, permease protein K10020 occQ; octopine/nopaline transport system permease protein D Pvag_0654 putative ABC transport system, ATPase component K10021 occP; octopine/nopaline transport system ATP-binding protein [EC:7.4.2.1] D Pvag_pPag30024 Putative ABC transport system, ATP-binding protein K10021 occP; octopine/nopaline transport system ATP-binding protein [EC:7.4.2.1] D Pvag_2837 yhdW; Putative amino-acid ABC transporter-binding protein yhdW precursor K09969 aapJ; general L-amino acid transport system substrate-binding protein D Pvag_2838 yhdX; Putative amino-acid ABC transporter permease protein yhdX K09970 aapQ; general L-amino acid transport system permease protein D Pvag_2839 yhdY; Inner membrane amino-acid ABC transporter permease protein yhdY K09971 aapM; general L-amino acid transport system permease protein D Pvag_2840 yhdZ; putative ATP-binding component of a transport system yhdZ K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1] D Pvag_1753 fliY; Putative ABC transport system, periplasmic protein precursor K02424 tcyA; L-cystine transport system substrate-binding protein D Pvag_1752 yecS; Putative ABC transport system permease protein K10009 tcyB; L-cystine transport system permease protein D Pvag_1751 yecC; putative ABC transporter, ATP-biniding component K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1] D Pvag_pPag30380 Putative ABC transport system, periplasmic solute-binding protein precursor K16957 tcyK; L-cystine transport system substrate-binding protein D Pvag_pPag30379 Putative ABC transport system, permease protein K16958 tcyL; L-cystine transport system permease protein D Pvag_pPag30378 Putative ABC transport system, permease protein K16959 tcyM; L-cystine transport system permease protein D Pvag_pPag30381 Putative ABC transport system, ATP-binding protein K16960 tcyN; L-cystine transport system ATP-binding protein [EC:7.4.2.1] D Pvag_3006 livJ; Leu/Ile/Val-binding protein 2 precursor K01999 livK; branched-chain amino acid transport system substrate-binding protein D Pvag_3005 livH; High-affinity branched-chain amino acid transport system permease protein livH K01997 livH; branched-chain amino acid transport system permease protein D Pvag_3004 livM; High-affinity branched-chain amino acid transport system permease protein livM K01998 livM; branched-chain amino acid transport system permease protein D Pvag_3003 livG; high-affinity branched-chain amino acid transport ATP-binding protein livG K01995 livG; branched-chain amino acid transport system ATP-binding protein D Pvag_3002 livF; Phosphate import ATP-binding protein pstB K01996 livF; branched-chain amino acid transport system ATP-binding protein D Pvag_0228 metQ; D-methionine-binding lipoprotein MetQ precursor K02073 metQ; D-methionine transport system substrate-binding protein D Pvag_pPag10051 metQ; Putative ABC transport system, periplasmic solute-binding protein precursor K02073 metQ; D-methionine transport system substrate-binding protein D Pvag_pPag30195 metQ1; Putative ABC transport system, periplasmic solute-binding protein precursor K02073 metQ; D-methionine transport system substrate-binding protein D Pvag_pPag30200 metQ3; Putative ABC transport system, periplasmic solute-binding protein precursor K02073 metQ; D-methionine transport system substrate-binding protein D Pvag_pPag30300 yaeC; Putative ABC transport system, periplasmic solute-binding protein precursor K02073 metQ; D-methionine transport system substrate-binding protein D Pvag_0229 metI; D-methionine transport system permease protein MetI K02072 metI; D-methionine transport system permease protein D Pvag_pPag10053 metI; Putative ABC transport system, permease protein K02072 metI; D-methionine transport system permease protein D Pvag_pPag30197 metI1; Putative ABC transport system, permease protein K02072 metI; D-methionine transport system permease protein D Pvag_pPag30202 metI3; Putative ABC transport system, permease protein K02072 metI; D-methionine transport system permease protein D Pvag_0230 metN; D-methionine transport ATP-binding protein MetN K02071 metN; D-methionine transport system ATP-binding protein D Pvag_pPag10052 metN; Putative ABC transport system, ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein D Pvag_pPag30196 metN1; Putative ABC transport system, ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein D Pvag_pPag30201 metN3; Putative ABC transport system, ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein D Pvag_0050 Putative ABC transport system, periplasmic solute-binding protein precursor K11959 urtA; urea transport system substrate-binding protein D Pvag_0049 Putative ABC transport system, permease protein K11960 urtB; urea transport system permease protein D Pvag_0048 Putative ABC transport system, permease protein K11961 urtC; urea transport system permease protein D Pvag_0047 Putative ABC transport system, ATP-binding protein K11962 urtD; urea transport system ATP-binding protein D Pvag_0046 Putative ABC transport system, ATP-binding protein K11963 urtE; urea transport system ATP-binding protein D Pvag_0593 putative ABC transport system, ATPase-binding component K11963 urtE; urea transport system ATP-binding protein D Pvag_0008 Putative ABC transport system, periplasmic solute-binding protein precursor K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D Pvag_0254 putative ABC transport system, periplasmic protein precursor K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D Pvag_1910 putative ABC transport system periplasmic solute-binding protein precursor K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D Pvag_pPag30327 Putative ABC transport system, periplasmic solute-binding protein precursor K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D Pvag_pPag30331 Putative ABC transport system, periplasmic solute-binding protein precursor K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D Pvag_0007 Putative ABC transport system, permease protein K02029 ABC.PA.P; polar amino acid transport system permease protein D Pvag_0255 putative ABC transport system, permease protein K02029 ABC.PA.P; polar amino acid transport system permease protein D Pvag_0256 putative ABC transport system, permease protein K02029 ABC.PA.P; polar amino acid transport system permease protein D Pvag_0481 putative ABC transport system, permease protein K02029 ABC.PA.P; polar amino acid transport system permease protein D Pvag_1909 putative ABC transport system, permease protein K02029 ABC.PA.P; polar amino acid transport system permease protein D Pvag_pPag30329 Putative ABC transport system, permease protein K02029 ABC.PA.P; polar amino acid transport system permease protein D Pvag_0006 Putative ABC transport system, ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D Pvag_0257 Putative ABC transport system, ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D Pvag_0482 putative ABC transport system, ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D Pvag_1908 putative ABC transport system, ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D Pvag_pPag30328 Putative ABC transport system, ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D Pvag_1447 mppA; Periplasmic murein peptide-binding protein precursor K15580 oppA; oligopeptide transport system substrate-binding protein D Pvag_1528 oppA2; Periplasmic oligopeptide-binding protein precursor K15580 oppA; oligopeptide transport system substrate-binding protein D Pvag_1529 oppA1; Periplasmic oligopeptide-binding protein precursor K15580 oppA; oligopeptide transport system substrate-binding protein D Pvag_1527 oppb3; Oligopeptide transport system permease protein oppB K15581 oppB; oligopeptide transport system permease protein D Pvag_1526 oppc3; Oligopeptide transport system permease protein oppC K15582 oppC; oligopeptide transport system permease protein D Pvag_1525 oppd3; Oligopeptide transport ATP-binding protein oppD K15583 oppD; oligopeptide transport system ATP-binding protein D Pvag_1524 oppf3; Oligopeptide transport ATP-binding protein oppF K10823 oppF; oligopeptide transport system ATP-binding protein D Pvag_1408 dppa1; Putative ABC transport system, periplasmic solute-binding protein precursor K12368 dppA; dipeptide transport system substrate-binding protein D Pvag_3347 dppa3; Putative ABC transport system, periplasmic solute-binding protein precursor K12368 dppA; dipeptide transport system substrate-binding protein D Pvag_3348 dppb3; Putative ABC transport system, permease protein K12369 dppB; dipeptide transport system permease protein D Pvag_3349 dppc3; Putative ABC transport system, permease protein K12370 dppC; dipeptide transport system permease protein D Pvag_3350 dppd3; Putative ABC transport system, ATP-binding protein K12371 dppD; dipeptide transport system ATP-binding protein D Pvag_3351 dppf3; Putative ABC transport system, ATP-binding protein K12372 dppF; dipeptide transport system ATP-binding protein D Pvag_1463 sapA; Peptide transport periplasmic protein sapA precursor K19226 sapA; cationic peptide transport system substrate-binding protein D Pvag_1464 sapB; Peptide transport system permease protein sapB K19227 sapB; cationic peptide transport system permease protein D Pvag_1468 sapC; Peptide transport system permease protein sapC K19228 sapC; cationic peptide transport system permease protein D Pvag_1469 sapD; Peptide transport system ATP-binding protein sapD K19229 sapD; cationic peptide transport system ATP-binding protein D Pvag_1470 sapF; Peptide transport system ATP-binding protein sapF K19230 sapF; cationic peptide transport system ATP-binding protein D Pvag_0677 ylib1; Putative ABC transport system, periplasmic substrate-binding component yliB K13889 gsiB; glutathione transport system substrate-binding protein D Pvag_1055 ylib3; Putative ABC transport system, periplasmic substrate-binding protein yliB precursor K13889 gsiB; glutathione transport system substrate-binding protein D Pvag_0678 ylic1; putative ABC transport system, permease component yliC K13890 gsiC; glutathione transport system permease protein D Pvag_1056 ylic3; Putative ABC transport system, permease protein yliC K13890 gsiC; glutathione transport system permease protein D Pvag_0679 ylid1; Putative ABC transport system, permease protein K13891 gsiD; glutathione transport system permease protein D Pvag_1057 ylid3; Putative ABC transport system, permease protein K13891 gsiD; glutathione transport system permease protein D Pvag_0676 ylia1; Putative ABC transport system, ATP-binding protein yliA K13892 gsiA; glutathione transport system ATP-binding protein D Pvag_1054 ylia3; putative ABC transport system, ATP-binding protein yliA K13892 gsiA; glutathione transport system ATP-binding protein D Pvag_1316 oppa3; putative ABC transport system, periplasmic substrate-binding protein precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Pvag_1885 ophA; Putative ABC transport system, periplasmic solute-binding protein precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Pvag_1919 oppa5; putative ABC transport system periplasmic substrate-binding protein oppA precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Pvag_2346 ddpA; Putative ABC transporter, periplasmic transport protein precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Pvag_3736 Putative ABC transport system, periplasmic solute-binding protein precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Pvag_pPag30343 Putative ABC transport system, periplasmic solute-binding protein precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Pvag_1315 oppb1; putative ABC transport system, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein D Pvag_1884 ophB; Putative ABC transport system, permease component K02033 ABC.PE.P; peptide/nickel transport system permease protein D Pvag_1920 oppb5; Putative ABC transport system permease protein oppB K02033 ABC.PE.P; peptide/nickel transport system permease protein D Pvag_2347 dppb1; Putative ABC transporter, inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein D Pvag_pPag30344 Putative ABC transport system, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein D Pvag_1314 oppc1; putative ABC transport system, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Pvag_1883 ophC; Putative ABC transport system, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Pvag_1921 oppc5; putative ABC transport system permease protein oppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Pvag_2348 dppc1; Putative ABC transporter, inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Pvag_pPag30346 Putative ABC transport system, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Pvag_1313 oppd1; putative ABC transport system, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D Pvag_1882 ophD; Putative ABC transport system, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D Pvag_1922 oppd5; putative ABC transport system ATP-binding protein oppD K02031 ddpD; peptide/nickel transport system ATP-binding protein D Pvag_2349 dppd1; Putative ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D Pvag_pPag30347 Putative ABC transport system, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D Pvag_1312 oppf1; putative ABC transport system, ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D Pvag_1923 oppf5; putative ABC transport system ATP-binding protein oppF K02032 ddpF; peptide/nickel transport system ATP-binding protein D Pvag_2350 dppf1; Putative ABC transporter, ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D Pvag_2052 yejA; ABC transport system periplasmic protein yejA precursor K13893 yejA; microcin C transport system substrate-binding protein D Pvag_2053 yejB; inner membrane ABC transporter permease protein yejB K13894 yejB; microcin C transport system permease protein D Pvag_2054 yejE; Inner membrane ABC transporter permease protein yejE K13895 yejE; microcin C transport system permease protein D Pvag_2055 yejF; putative ABC transporter, ATP binding protein yejF K13896 yejF; microcin C transport system ATP-binding protein D Pvag_0190 fhuB; Ferrichrome transport system permease protein fhuB K23228 fhuB; ferric hydroxamate transport system permease protein D Pvag_0189 fhuC; Ferrichrome transport ATP-binding protein fhuC K10829 fhuC; ferric hydroxamate transport system ATP-binding protein [EC:7.2.2.16] D Pvag_2582 hmuT; Hemin-binding periplasmic protein HmuT precursor K25132 hmuT; heme transport system substrate-binding protein D Pvag_2581 hmuU; Hemin transport system permease protein hmuU K25133 hmuU; heme transport system permease protein D Pvag_2580 hmuV; hemin transport system ATP-binding protein K10834 hmuV; heme transport system ATP-binding protein [EC:7.6.2.5] D Pvag_3658 fepB; Ferrienterobactin-binding periplasmic protein precursor K23185 fepB; ferric enterobactin transport system substrate-binding protein D Pvag_3660 fepD; Ferric enterobactin transport system permease protein fepD K23186 fepD; iron-siderophore transport system permease protein D Pvag_3661 fepG; Ferric enterobactin transport system permease protein fepG K23187 fepG; iron-siderophore transport system permease protein D Pvag_3662 fepC; ATP-binding component of ferric enterobactin transport fepC K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-] D Pvag_pPag20042 cbrA; Achromobactin-binding periplasmic protein precursor K25109 sirA; iron-siderophore transport system substrate-binding protein D Pvag_pPag20043 cbrB; Achromobactin transport system permease protein cbrB K25110 sirB; iron-siderophore transport system permease protein D Pvag_pPag20044 cbrC; Achromobactin transport system permease protein cbrC K25111 sirC; iron-siderophore transport system permease protein D Pvag_pPag20045 cbrD; Achromobactin transport ATP-binding protein cbrD K25130 fecE; iron-siderophore transport system ATP-binding protein [EC:7.2.2.-] D Pvag_0469 yiuA; putative ABC transport system, substrate-binding periplasmic protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D Pvag_1318 Putative ABC transport system, periplasmic solute-binding protein precursor K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D Pvag_pPag30065 Putative iron(III) ABC transporter, periplasmic solute-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D Pvag_pPag30296 fbp; putative ABC transport system, periplasmic binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D Pvag_pPag30473 yiuA; putative ABC transport system, periplasmic binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D Pvag_2035 yiuB; Putative ABC transporter permease protein K02015 ABC.FEV.P; iron complex transport system permease protein D Pvag_2034 yiuC; putative siderophore ABC transporter, ATP-binding subunit K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D Pvag_0193 yadT; putative ABC transport system, substrate-binding protein precursor K06858 btuF; vitamin B12 transport system substrate-binding protein D Pvag_1142 btuC; Vitamin B12 import system permease protein btuC K06073 btuC; vitamin B12 transport system permease protein D Pvag_1144 btuD; ATP-binding component of vitamin B12 transport system K06074 btuD; vitamin B12 transport system ATP-binding protein [EC:7.6.2.8] D Pvag_1662 znuA; ABC transport system periplasmic zinc-binding protein znuA precursor K09815 znuA; zinc transport system substrate-binding protein D Pvag_1664 znuB; ABC transport system membrane protein znuB K09816 znuB; zinc transport system permease protein D Pvag_1663 znuC; ABC transport system, ATP-binding protein znuC K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D Pvag_pPag30486 sitA; Iron ABC transporter substrate-binding precursor K11604 sitA; manganese/iron transport system substrate-binding protein D Pvag_pPag30484 sitC; Iron transport system membrane protein sitC K11605 sitC; manganese/iron transport system permease protein D Pvag_pPag30483 sitD; Iron transport system membrane protein sitD K11606 sitD; manganese/iron transport system permease protein D Pvag_pPag30485 sitB; Iron transport protein, ATP-binding protein SitB K11607 sitB; manganese/iron transport system ATP-binding protein D Pvag_0400 Metal ABC transporter substrate-binding protein precursor K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein D Pvag_0399 Metal ABC transport system permease protein K02075 ABC.ZM.P; zinc/manganese transport system permease protein D Pvag_0398 Metal ABC transport system, ATP-binding protein K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein D Pvag_1967 wzt; polysaccharide ABC transporter, ATP-binding protein wzt K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14] D Pvag_3723 yjgP; Uncharacterized protein K07091 lptF; lipopolysaccharide export system permease protein D Pvag_3724 yjgQ; Inner membrane protein yjgQ K11720 lptG; lipopolysaccharide export system permease protein D Pvag_3635 yhbG; Putative ABC transport system, ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D Pvag_0923 ycfU; lipoprotein releasing system, transmembrane protein K09808 lolC_E_F; lipoprotein-releasing system permease protein D Pvag_0925 ycfW; Lipoprotein releasing system transmembrane protein K09808 lolC_E_F; lipoprotein-releasing system permease protein D Pvag_0924 ycfV; Lipoprotein releasing system ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D Pvag_2158 Heme exporter protein D K02196 ccmD; heme exporter protein D D Pvag_2159 ccmC; Heme exporter protein C K02195 ccmC; heme exporter protein C D Pvag_2160 ccmB; Heme exporter protein B K02194 ccmB; heme exporter protein B D Pvag_2161 ccmA; heme exporter protein A K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D Pvag_3009 ftsX; cell division membrane protein ftsX K09811 ftsX; cell division transport system permease protein D Pvag_3010 ftsE; cell division ATP-binding protein ftsE K09812 ftsE; cell division transport system ATP-binding protein D Pvag_0175 yadH; putative ABC transport system, permease component K01992 ABC-2.P; ABC-2 type transport system permease protein D Pvag_0174 yadG; putative ABC tranport system, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Pvag_0433 ybbP; Putative ABC transport system, permease protein ybbP K02004 ABC.CD.P; putative ABC transport system permease protein D Pvag_0432 ybbA; putative ABC transport system ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Pvag_1156 sufC; Iron-sulfur cluster biosynthesis protein sufC K09013 sufC; Fe-S cluster assembly ATP-binding protein D Pvag_2196 yfeH; Uncharacterized membrane protein yfeH K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7 D Pvag_1166 ydhE; Multidrug resistance protein ydhE K26939 norM; MATE family, multidrug efflux pump D Pvag_1825 yeeO; Putative MATE family transport protein K26937 dinF; MATE family, multidrug efflux pump D Pvag_3515 dinF; putative DNA damage-inducible membrane protein F K26937 dinF; MATE family, multidrug efflux pump D Pvag_2555 galp1; Galactose-proton symporter K08137 galP; MFS transporter, SP family, galactose:H+ symporter D Pvag_3042 galp3; Galactose-proton symporter K08137 galP; MFS transporter, SP family, galactose:H+ symporter D Pvag_3279 xylE; D-xylose-proton symporter (D-xylose transporter) K08138 xylE; MFS transporter, SP family, xylose:H+ symportor D Pvag_pPag30221 iolT; Putative sugar transporter K06609 iolT; MFS transporter, SP family, major inositol transporter D Pvag_0044 fucP; Putative MFS family transporter K02429 fucP; MFS transporter, FHS family, fucose-galactose-glucose:H+ symporter family protein D Pvag_2927 yhfC; Putative MFS family transporter K06141 tsgA; MFS transporter, TsgA protein D Pvag_0104 yabM; Putative sugar efflux transporter K03291 MFS.SET; MFS transporter, SET family, sugar efflux transporter D Pvag_1302 cita1; MFS citrate-proton symporter K03288 citA; MFS transporter, MHS family, citrate/tricarballylate:H+ symporter D Pvag_2371 kgtP; Putative MFS family transporter K03761 kgtP; MFS transporter, MHS family, alpha-ketoglutarate permease D Pvag_0069 Putative MFS family transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter D Pvag_3036 proP; Proline/betaine transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter D Pvag_pPag30193 proP; Putative proline/betaine transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter D Pvag_pPag30237 putative MFS family transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter D Pvag_0021 ydfJ; Putative MFS family transporter K08173 ydfJ; MFS transporter, MHS family, metabolite:H+ symporter D Pvag_2167 yhjX; Major facilitator superfamily protein yhjX K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter D Pvag_2335 oxlT; Putative MFS family transporter K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter D Pvag_2469 ygcZ; Putative MFS family transporter K03535 gudP; MFS transporter, ACS family, glucarate transporter D Pvag_3072 gudP; Probable glucarate transporter K03535 gudP; MFS transporter, ACS family, glucarate transporter D Pvag_2006 Putative MFS family transporter K08191 exuT; MFS transporter, ACS family, aldohexuronate transporter D Pvag_2615 exut1; Putative MFS family transporter K08191 exuT; MFS transporter, ACS family, aldohexuronate transporter D Pvag_2728 exut3; Hexuronate transporter K08191 exuT; MFS transporter, ACS family, aldohexuronate transporter D Pvag_pPag30036 ttuB; putative tartrate transporter K13021 ttuB; MFS transporter, ACS family, tartrate transporter D Pvag_pPag30139 Putative MFS transport protein K13021 ttuB; MFS transporter, ACS family, tartrate transporter D Pvag_pPag30409 Putative MFS family transporter K13021 ttuB; MFS transporter, ACS family, tartrate transporter D Pvag_3086 yjiZ; Putative MFS family transporter K23016 lgoT; MFS transporter, ACS family, L-galactonate transporter D Pvag_1416 pcaK; Putative MFS family transporter K08195 pcaK; MFS transporter, AAHS family, 4-hydroxybenzoate transporter D Pvag_0298 cynX; putative MFS family transporter cynX K03449 MFS.CP; MFS transporter, CP family, cyanate transporter D Pvag_pPag30182 Putative MFS family transport protein K03449 MFS.CP; MFS transporter, CP family, cyanate transporter D Pvag_pPag30501 igiE; Putative MFS family transporter K03449 MFS.CP; MFS transporter, CP family, cyanate transporter D Pvag_2297 hcaT; Putative 3-phenylpropionic acid transporter K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter D Pvag_3421 glpT; Glycerol-3-phosphate transporter K02445 glpT; MFS transporter, OPA family, glycerol-3-phosphate transporter D Pvag_2414 narK; Nitrate transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D Pvag_3709 ygeD; Putative MFS family transporter ygeD K08227 lplT; MFS transporter, LPLT family, lysophospholipid transporter D Pvag_3659 entS; Enterobactin exporter entS K08225 entS; MFS transporter, ENTS family, enterobactin (siderophore) exporter D Pvag_0372 ampG; Putative MFS family transporter ampG K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D Pvag_1123 tcaB; Putative MFS family protein K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D Pvag_1561 putative MFS family transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D Pvag_2057 bcr; Bicyclomycin resistance protein K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D Pvag_3154 emrD; Putative MFS family transporter K08154 emrD; MFS transporter, DHA1 family, 2-module integral membrane pump EmrD D Pvag_1389 ydeA; putative MFS family transporter K08159 sotB; MFS transporter, DHA1 family, L-arabinose/isopropyl-beta-D-thiogalactopyranoside export protein D Pvag_1658 mdfA; Multidrug resistance protein mdfA K08160 mdfA; MFS transporter, DHA1 family, multidrug/chloramphenicol efflux transport protein D Pvag_pPag30342 dfoS; Putative siderophore MFS transporter K08160 mdfA; MFS transporter, DHA1 family, multidrug/chloramphenicol efflux transport protein D Pvag_0309 yceE; Putative MFS family transporter yceE K08161 mdtG; MFS transporter, DHA1 family, multidrug resistance protein D Pvag_3574 Putative MFS family transporter K08161 mdtG; MFS transporter, DHA1 family, multidrug resistance protein D Pvag_1169 ydhC; Putative MFS family protein K28371 punC; MFS transporter, DHA1 family, purine nucleoside transporter D Pvag_2511 ydhP; putative MFS family transporter ydhP K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein D Pvag_pPag30247 Putative MFS family transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein D Pvag_0668 emrb1; Multidrug resistance protein B K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein D Pvag_2173 emrb3; Putative MFS family transporter K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein D Pvag_2364 emrb5; Multidrug resistance transport protein emrB K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein D Pvag_1602 yebQ; putative MFS family transporter yebQ K08169 yebQ; MFS transporter, DHA2 family, multidrug resistance protein D Pvag_1999 yegB; Putative transport protein K18326 mdtD; MFS transporter, DHA2 family, multidrug resistance protein D Pvag_1387 ynfm1; putative MFS family transporter ynfM K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein D Pvag_0729 ycaD; Putative MFS family transporter K08219 UMF2; MFS transporter, UMF2 family, putative MFS family transporter protein D Pvag_3562 Putative MFS family transporter K08369 ydjE; MFS transporter, putative metabolite:H+ symporter D Pvag_2204 ptsI; phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D Pvag_2502 ptsP; phosphoenolpyruvate-protein phosphotransferase K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9] D Pvag_2203 ptsH; Phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr D Pvag_3630 ptsO; Phosphocarrier protein NPr (Nitrogen-related HPr) K08485 ptsO; phosphocarrier protein NPr D Pvag_2043 fruB; PTS system, fructose-specific IIA/fpr component K11183 fruB; multiphosphoryl transfer protein [EC:2.7.1.202] D Pvag_2205 crr; PTS system, glucose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D Pvag_0902 ptsG; PTS system, glucose-specific IIBC component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199] D Pvag_pPag30117 ganC; PTS system EIIB component ganC K02778 ptsGb; glucose PTS system EIIB component [EC:2.7.1.199] D Pvag_0521 nagE; pts system, N-acetylglucosamine-specific IIABC component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193] D Pvag_1476 malX; PTS system, maltose and glucose-specific II ABC K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D Pvag_pPag10154 scrA; PTS system, sucrose-specific IIBC component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211] D Pvag_pPag30319 bglF; PTS system, beta-glucoside-specific IIABC component K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-] D Pvag_pPag30436 ascF; PTS system, beta-glucoside-specific IIABC component K02753 ascF; beta-glucoside (arbutin/salicin/cellobiose) PTS system EIICB component [EC:2.7.1.-] D Pvag_3552 yfeV; PTS system, IIBC component, putative K11192 murP; N-acetylmuramic acid PTS system EIICB component [EC:2.7.1.192] D Pvag_3767 ptxa3; PTS system, IIA component K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202] D Pvag_2041 fruA; PTS system, fructose-specific IIBC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D Pvag_3766 ptxBC; PTS system, IIBC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D Pvag_3337 mtlA; PTS system, mannitol-specific IIABC component K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197] D Pvag_pPag20074 srlB1; Glucitol/sorbitol-specific phosphotransferase enzyme IIA component K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198] D Pvag_pPag20101 srlB3; Glucitol/sorbitol-specific phosphotransferase enzyme IIA component K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198] D Pvag_pPag20073 srlE1; PTS system, glucitol/sorbitol-specific IIBC component K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198] D Pvag_pPag20102 srlE3; PTS system, glucitol/sorbitol-specific IIBC component K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198] D Pvag_pPag20072 srlA1; PTS system, glucitol/sorbitol-specific IIC component 2 K02783 srlA; glucitol/sorbitol PTS system EIIC component D Pvag_pPag20103 srlA3; PTS system, glucitol/sorbitol-specific IIC component 2 K02783 srlA; glucitol/sorbitol PTS system EIIC component D Pvag_1592 manX; PTS system, mannose-specific IIAB component K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191] D Pvag_1593 manY; Mannose permease IIC component K02795 manY; mannose PTS system EIIC component D Pvag_1594 manZ; Mannose permease IID component K02796 manZ; mannose PTS system EIID component D Pvag_1295 ptxa1; PTS system, IIA component K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194] D Pvag_pPag30336 ptxA; putative PEP-dependent phosphotransferase system component II A K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194] D Pvag_1291 ptxB; putative sugar phosphotransferase component IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194] D Pvag_pPag30337 ptxB; putative PEP-dependent phosphotransferase system component IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194] D Pvag_1292 ptxc1; PTS permease IIC component K03475 ulaA; ascorbate PTS system EIIC component D Pvag_pPag30338 ptxC; Putative PEP-dependent phosphotransferase system IIC component K03475 ulaA; ascorbate PTS system EIIC component D Pvag_3632 ptsN; nitrogen regulatory IIA protein K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] D Pvag_3500 aqpZ; Aquaporin Z K06188 aqpZ; aquaporin D Pvag_3151 glpF; Glycerol uptake facilitator protein K02440 glpF; glycerol uptake facilitator D Pvag_0392 amtB; Ammonia channel precursor (Ammonia transporter) K03320 amt; ammonium transporter, Amt family D Pvag_1228 gst; Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D Pvag_2116 yfcF; Uncharacterized GST-like protein yfcF K00799 GST; glutathione S-transferase [EC:2.5.1.18] D Pvag_3099 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D Pvag_3540 gstA; Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D Pvag_pPag30025 gstA; glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D Pvag_pPag30099 gst; Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D Pvag_3624 sspA; Stringent starvation protein A K03599 sspA; stringent starvation protein A D Pvag_0792 yccA; Inner membrane protein yccA K19416 yccA; modulator of FtsH protease D Pvag_0732 focA; Probable formate transporter 1 K06212 focA; formate transporter D Pvag_2187 fdhC; putative FNT family transport protein fdhC K21993 fdhC; formate transporter D Pvag_2859 mscL; Large-conductance mechanosensitive channel K03282 mscL; large conductance mechanosensitive channel D Pvag_0618 mscS; Uncharacterized mscS family protein precursor K05802 mscK; potassium-dependent mechanosensitive channel D Pvag_2805 bspA; Putative MscS family protein precursor K22051 mscM; miniconductance mechanosensitive channel D Pvag_2543 yggB; Small-conductance mechanosensitive channel K03442 mscS; small conductance mechanosensitive channel D Pvag_1201 Putative MscS family transporter K16053 ybdG; miniconductance mechanosensitive channel D Pvag_2262 mgtE; Putative MgtE family transporter K06213 mgtE; magnesium transporter D Pvag_1729 motA; Chemotaxis protein motA (Motility protein A) K02556 motA; chemotaxis protein MotA D Pvag_1728 motB; Chemotaxis protein motB (Motility protein B) K02557 motB; chemotaxis protein MotB D Pvag_2630 exbB; Biopolymer transport exbB protein K03561 exbB; biopolymer transport protein ExbB D Pvag_2629 exbD; Biopolymer transport protein exbD K03559 exbD; biopolymer transport protein ExbD D Pvag_0557 tolQ; Protein tolQ K03562 tolQ; biopolymer transport protein TolQ D Pvag_0558 tolR; Protein tolR K03560 tolR; biopolymer transport protein TolR D Pvag_0452 CorA-like transporter protein K03284 corA; magnesium transporter D Pvag_3409 corA; Magnesium transport protein corA K03284 corA; magnesium transporter D Pvag_1446 ydaN; putative Zinc transport protein ydaN K16074 zntB; zinc transporter D Pvag_0971 crcb1; Protein crcB K06199 crcB; fluoride exporter D Pvag_3081 crcb3; Protein crcB K06199 crcB; fluoride exporter D Pvag_2392 corB; putative membrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D Pvag_2768 ytfL; UPF0053 protein yhdP K03699 tlyC; magnesium and cobalt exporter, CNNM family D Pvag_0755 ompf1; Outer membrane pore protein F precursor K09476 ompF; outer membrane pore protein F D Pvag_1113 ompf3; Outer membrane porin protein precursor K09476 ompF; outer membrane pore protein F D Pvag_0281 phoE; Outer membrane pore protein E precursor K11929 phoE; outer membrane pore protein E D Pvag_2072 ompC; Outer membrane protein C precursor K09475 ompC; outer membrane pore protein C D Pvag_pPag30118 ganL; Putative galactan outer membrane porin precursor ganL K02024 lamB; maltoporin D Pvag_pPag30210 malL; Maltoporin precursor (Maltose-inducible porin) K02024 lamB; maltoporin D Pvag_pPag10155 scrY; Sucrose porin precursor K16077 scrY; sucrose porin D Pvag_0779 ompA; Outer membrane protein A precursor K03286 TC.OOP; OmpA-OmpF porin, OOP family D Pvag_0663 ompX; Outer membrane protein X precursor K11934 ompX; outer membrane protein X D Pvag_2151 fadL; Long-chain fatty acid transport protein precursor K06076 fadL; long-chain fatty acid transport protein D Pvag_3568 tsx; Nucleoside-specific channel-forming protein tsx precursor K05517 tsx; nucleoside-specific channel-forming protein D Pvag_1344 stbC; Outer membrane usher protein fimD precursor K07347 fimD; outer membrane usher protein D Pvag_2626 csuD; Outer membrane usher protein fimD precursor K07347 fimD; outer membrane usher protein D Pvag_3600 fimD; Outer membrane usher protein fimD precursor K07347 fimD; outer membrane usher protein D Pvag_pPag10091 fimD; Outer membrane usher protein fimD precursor K07347 fimD; outer membrane usher protein D Pvag_pPag20200 bcfC; Outer membrane usher protein fimD precursor K07347 fimD; outer membrane usher protein D Pvag_pPag30167 yraJ; Outer membrane usher protein fimD precursor K07347 fimD; outer membrane usher protein D Pvag_pPag10082 iga; IgA-specific serine endopeptidase K12684 esp; serine protease autotransporter [EC:3.4.21.-] D Pvag_pPag30470 estA; Putative outer membrane lipase/esterase precursor K12686 apeE; outer membrane lipase/esterase D Pvag_3666 fepA; ferrienterobactin receptor precursor fepA K19611 fepA; ferric enterobactin receptor D Pvag_pPag30358 fepA; TonB-dependent outer membrane siderophore receptor precursor K19611 fepA; ferric enterobactin receptor D Pvag_3123 btuB; Outer membrane cobalamin receptor protein K16092 btuB; vitamin B12 transporter D Pvag_pPag30354 fhuE; FhuE receptor precursor K16088 TC.FEV.OM1; outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid D Pvag_2584 hupa1; TonB-dependent heme receptor A precursor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein D Pvag_0188 fhuA; Ferrichrome-iron receptor precursor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Pvag_1011 foxA; Putative TonB-dependent siderophore receptor precursor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Pvag_1276 yncD; Probable tonB-dependent receptor yncD precursor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Pvag_pPag20041 acr; Ferric achromobactin receptor precursor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Pvag_pPag30064 TonB-dependent receptor precursor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Pvag_pPag30472 fhuA; TonB-dependent siderophore receptor precursor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Pvag_2650 tolC; Outer membrane protein tolC precursor K12340 tolC; outer membrane protein D Pvag_pPag10094 Putative efflux pump outer membrane protein precursor K12340 tolC; outer membrane protein D Pvag_2075 cyaE; Putative outer membrane protein precursor K12543 lapE; outer membrane protein, adhesin transport system D Pvag_3771 putative type I secretion outer membrane protein precursor K12543 lapE; outer membrane protein, adhesin transport system D Pvag_0830 oprM; Probable RND efflux system, outer membrane protein precursor K18139 oprM; outer membrane protein, multidrug efflux system D Pvag_3707 putative RND efflux system, outer membrane protein precursor K18139 oprM; outer membrane protein, multidrug efflux system D Pvag_pPag30418 ibeB; putative RND efflux system, outer membrane lipoprotein precursor K18139 oprM; outer membrane protein, multidrug efflux system D Pvag_0669 RND efflux system, outer membrane protein K18904 nodT; outer membrane protein, multidrug efflux system D Pvag_1984 wza; Polysaccharide export protein precursor K01991 wza; polysaccharide biosynthesis/export protein D Pvag_1993 oprB; Porin B precursor K07267 oprB; porin D Pvag_pPag30321 oprB; Porin B precursor K07267 oprB; porin D Pvag_0210 yaeT; Outer membrane protein assembly factor yaeT precursor K07277 SAM50; outer membrane protein insertion porin family D Pvag_2276 yfgL; Putative outer membrane protein yfgL K17713 bamB; outer membrane protein assembly factor BamB D Pvag_2235 nlpB; Lipoprotein 34 precursor nlpB K07287 bamC; outer membrane protein assembly factor BamC D Pvag_2380 yfiO; putative UPF0169 lipoprotein yfiO precursor K05807 bamD; outer membrane protein assembly factor BamD D Pvag_2331 smpA; Small protein A precursor K06186 bamE; outer membrane protein assembly factor BamE D Pvag_2767 ytfM; Uncharacterized protein ytfM precursor K07278 tamA; translocation and assembly module TamA D Pvag_2766 ytfN; Uncharacterized protein ytfN K09800 tamB; translocation and assembly module TamB D Pvag_2758 yiiY; Putative KdgM family transporter K22110 kdgM; oligogalacturonate-specific porin family protein D Pvag_3636 yhbN; Protein yhbN precursor K09774 lptA; lipopolysaccharide export system protein LptA D Pvag_3637 yrbK; Uncharacterized protein yrbK K11719 lptC; lipopolysaccharide export system protein LptC D Pvag_0094 imp; LPS-assembly protein precursor K04744 lptD; LPS-assembly protein D Pvag_0495 rlpB; LPS-assembly lipoprotein rlpB precursor K03643 lptE; LPS-assembly lipoprotein D Pvag_3356 bcsC; cellulose synthase subunit C K20543 bcsC; cellulose synthase operon protein C D Pvag_3366 yhjL; Cellulose synthase operon protein C K20543 bcsC; cellulose synthase operon protein C D Pvag_1555 yeaF; MltA-interacting protein precursor K07274 mipA; MipA family protein D Pvag_0504 corC; Magnesium and cobalt efflux protein corC K06189 corC; hemolysin (HlyC) family protein D Pvag_2018 yohJ; UPF0299 membrane protein yohJ K06518 cidA; holin-like protein D Pvag_3544 ywbH; Putative LrgA holin family protein ywbH K06518 cidA; holin-like protein D Pvag_0904 uxuT; putative oligogalacturonide transporter K16210 togT; oligogalacturonide transporter D Pvag_2036 lysP; Lysine-specific permease K11733 lysP; lysine-specific permease D Pvag_0145 aroP; Aromatic amino acid permease K11734 aroP; aromatic amino acid transport protein AroP D Pvag_pPag30457 gabP; GABA permease, GabP K11735 gabP; GABA permease D Pvag_0341 proY; putative proline-specific permease K11736 proY; proline-specific permease ProY D Pvag_0808 cycA; putative D-serine/D-alanine/glycine transporter K11737 cycA; D-serine/D-alanine/glycine transporter D Pvag_2223 ansP; L-asparagine permease K11738 ansP; L-asparagine permease D Pvag_2354 ykfD; putative S-methylmethionine permease K16235 mmuP; S-methylmethionine transporter D Pvag_1425 ydgI; Putative APC family transporter K03758 arcD; arginine:ornithine antiporter / lysine permease D Pvag_0327 Putative APC family permease K16238 eat; ethanolamine permease D Pvag_0571 ybgR; putative zinc transporter ybgR K16264 czcD; cobalt-zinc-cadmium efflux system protein D Pvag_3163 yiiP; Putative ferrous-iron efflux pump fieF K13283 fieF; ferrous-iron efflux pump FieF D Pvag_0403 acrb1; acriflavine resistance protein B K18138 acrB; multidrug efflux pump D Pvag_pPag10023 Putative RND superfamily transporter K18138 acrB; multidrug efflux pump D Pvag_pPag30419 mexB; Putative RND efflux system, inner membrane transporter component K18138 acrB; multidrug efflux pump D Pvag_2227 acrb3; Multidrug resistance protein K18324 acrD; multidrug efflux pump D Pvag_pPag10116 Putative HAE1 family efflux protein K21134 triC; multidrug efflux pump D Pvag_1264 Putative RND efflux system, transporter protein K19585 oqxB; multidrug efflux pump D Pvag_1997 yegN; Putative transport protein yegN K07788 mdtB; multidrug efflux pump D Pvag_3705 Putative RND efflux system, transporter protein K07788 mdtB; multidrug efflux pump D Pvag_1998 yegO; Putative transport protein yegO K07789 mdtC; multidrug efflux pump D Pvag_3706 Putative RND efflux system, transporter protein K07789 mdtC; multidrug efflux pump D Pvag_1618 ydgE; Putative SMR family transporter ydgE K11742 mdtI; spermidine export protein MdtI D Pvag_1617 ydgF; Putative SMR family transporter ydgF K11743 mdtJ; spermidine export protein MdtJ D Pvag_1017 Putative DMT superfamily transporter K15268 eamA; O-acetylserine/cysteine efflux transporter D Pvag_1322 yded1; putative DME family transporter K15268 eamA; O-acetylserine/cysteine efflux transporter D Pvag_3300 yded3; Putative DME family transporter ydeD K15268 eamA; O-acetylserine/cysteine efflux transporter D Pvag_0662 ybiF; Putative DME family transporter K11939 rhtA; inner membrane transporter RhtA D Pvag_1399 rhaT; L-rhamnose-proton symporter K02856 rhaT; L-rhamnose-H+ transport protein D Pvag_3411 rarD; Putative DMT superfamily transporter K05786 rarD; chloramphenicol-sensitive protein RarD D Pvag_pPag30072 ydcZ; Inner membrane protein ydcZ K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D Pvag_pPag10067 Inner membrane protein yfbW K12962 arnE; undecaprenyl phosphate-alpha-L-ara4N flippase subunit ArnE D Pvag_1374 ynfA; UPF0060 membrane protein K09771 TC.SMR3; small multidrug resistance family-3 protein D Pvag_0474 gntT; High-affinity gluconate transporter K06155 gntT; Gnt-I system high-affinity gluconate transporter D Pvag_2988 gntU; Low-affinity gluconate transporter K06156 gntU; Gnt-I system low-affinity gluconate transporter D Pvag_1938 ygbN; hypothetical permease ygbN K03299 TC.GNTP; gluconate:H+ symporter, GntP family D Pvag_1483 kdgT; 2-keto-3-deoxygluconate permease 1 K02526 kdgT; 2-keto-3-deoxygluconate permease D Pvag_3607 dcuA; Anaerobic C4-dicarboxylate transporter dcuA K07791 dcuA; anaerobic C4-dicarboxylate transporter DcuA D Pvag_0299 lldP; L-lactate permease K00427 lldP; L-lactate permease D Pvag_1613 betT; High-affinity choline transport protein K02168 betT; choline/glycine/proline betaine transport protein D Pvag_1079 chaA; Cation/proton exchanger 2 K07300 chaA; Ca2+:H+ antiporter D Pvag_3640 yrbG; Putative Ca2+:Cation antiporter K07301 yrbG; cation:H+ antiporter D Pvag_3050 pitA; Low-affinity inorganic phosphate transporter 1 K16322 pit; low-affinity inorganic phosphate transporter D Pvag_2833 panF; Sodium/pantothenate symporter K14392 panF; sodium/pantothenate symporter D Pvag_1745 putP; Sodium/proline symporter (Proline permease) K11928 putP; sodium/proline symporter D Pvag_3547 yjcG; Na+/solute symporter K14393 actP; cation/acetate symporter D Pvag_3550 gltP; proton/glutamate symport protein K11102 gltP; proton glutamate symport protein D Pvag_3368 dctA; C4-dicarboxylate transport protein K11103 dctA; aerobic C4-dicarboxylate transport protein D Pvag_2723 ygjU; C4-dicarboxylate transport protein K07862 sstT; serine/threonine transporter D Pvag_0073 nhaA; Na+/H+ antiporter nhaA K03313 nhaA; Na+:H+ antiporter, NhaA family D Pvag_3542 yjcE; Putative Na(+)/H(+) exchanger yjcE K24163 nhaK; monovalent cation/hydrogen antiporter D Pvag_3061 Cell volume regulation protein A K24160 NHA1; sodium/hydrogen antiporter D Pvag_1558 ycgO; Putative K+:H+ antiporter khaP2 K11105 cvrA; potassium/hydrogen antiporter D Pvag_2907 kefB; Glutathione-regulated potassium-efflux system protein kefB K11747 kefB; glutathione-regulated potassium-efflux system protein KefB D Pvag_2908 yheR; putative oxidoreductase K11748 kefG; glutathione-regulated potassium-efflux system ancillary protein KefG D Pvag_0419 ybaL; putative cation/proton antiporter K26735 KEA4_5_6; K+:H+ antiporter D Pvag_3445 trkH; Trk system potassium uptake protein trkH K03498 trkH; trk/ktr system potassium uptake protein D Pvag_2858 trkA; Trk system potassium uptake protein trkA K03499 trkA; trk/ktr system potassium uptake protein D Pvag_1867 Putative permease K10974 codB; cytosine permease D Pvag_2251 uraA; Uracil permease K02824 uraA; uracil permease D Pvag_0801 ycdG; Putative pyrimidine permease K09016 rutG; putative pyrimidine permease RutG D Pvag_1383 xanthine/uracil permease family protein K16345 xanP; xanthine permease XanP D Pvag_3216 yicE; Putative purine permease yicE K16345 xanP; xanthine permease XanP D Pvag_1829 Putative MFS family transporter K06901 pbuG; adenine/guanine/hypoxanthine permease D Pvag_3317 yieG; putative MFS family transporter K06901 pbuG; adenine/guanine/hypoxanthine permease D Pvag_3541 yjcD; Putative MFS family transporter K06901 pbuG; adenine/guanine/hypoxanthine permease D Pvag_2184 nupc1; Sodium/nucleoside cotransporter 1 K11535 nupC; nucleoside transport protein D Pvag_0468 sdaC; Serine transporter K03837 sdaC; serine transporter D Pvag_1272 ydcO; Putative benzoate membrane transport protein K05782 benE; benzoate membrane transport protein D Pvag_pPag30229 ygjE; Putative divalent anion transport protein K11106 ttdT; L-tartrate/succinate antiporter D Pvag_2720 Putative ClC family transporter K03281 clcA; chloride channel protein, CIC family D Pvag_pPag30445 yadQ; putative ClC family, chlorine-transport protein K03281 clcA; chloride channel protein, CIC family D Pvag_0823 ybar3; Putative sulfate transporter 1 K03321 TC.SULP; sulfate permease, SulP family D Pvag_2183 mntH; Probable manganese transport protein mntH K03322 mntH; manganese transport protein D Pvag_2631 dctP; TRAP transporter solute receptor, DctP family K11688 dctP; TRAP-type transport system periplasmic protein D Pvag_2632 dctQ; Putative TRAP transporter small permease protein dctQ K11689 dctQ; TRAP-type transport system small permease protein D Pvag_2633 dctM; TRAP transporter, DctM subunit K11690 dctM; TRAP-type transport system large permease protein D Pvag_3502 yjbB; Uncharacterized protein yjbB K03324 yjbB; phosphate:Na+ symporter D Pvag_3390 wzx3; Putative lipopolysaccharide biosynthesis protein wzx K16693 wzxE; enterobacterial common antigen flippase D Pvag_1974 wzx1; Extracellular polysaccharide biosynthesis protein wzx K16696 amsL; exopolysaccharide (amylovoran) exporter D Pvag_0871 mviN; Virulence factor mviN K03980 murJ; putative peptidoglycan lipid II flippase D Pvag_0321 hypothetical protein K28868 K28868; oligopeptide transporter family protein D Pvag_2012 Putative AEC family transporter K13936 mdcF; malonate transporter and related proteins D Pvag_2973 mdcF; Putative malonate transporter, MdcF K13936 mdcF; malonate transporter and related proteins D Pvag_3248 kup; Low affinity potassium transport system protein kup K03549 kup; KUP system potassium uptake protein D Pvag_2542 yggA; Putative LysE family transporter yggA K06895 lysE; L-lysine exporter family protein LysE/ArgO D Pvag_3418 rhtb3; Putative homoserine/homoserine lactone efflux protein K05834 rhtB; homoserine/homoserine lactone efflux protein D Pvag_3415 rhtC; Threonine efflux protein K05835 rhtC; threonine efflux protein D Pvag_pPag30154 rhtB7; Putative efflux transport protein rhtB K05835 rhtC; threonine efflux protein D Pvag_pPag30007 azlC; Branched-chain amino acid transport protein azlC K26605 azlC; branched chain amino acid efflux pump D Pvag_pPag30008 azlD; Branched-chain amino acid transport protein azlD K26606 azlD; branched chain amino acid efflux pump D Pvag_2814 aaeB; p-hydroxybenzoic acid efflux pump subunit aaeB K03468 aaeB; p-hydroxybenzoic acid efflux pump subunit AaeB D Pvag_3019 yhhQ; Inner membrane protein yhhQ K09125 yhhQ; queuosine precursor transporter D Pvag_3740 marC; Multiple antibiotic resistance protein marC K05595 marC; multiple antibiotic resistance protein D Pvag_0070 yaaH; hypothetical protein K07034 GPR1; acetate uptake transporter family protein D Pvag_0120 ftsW; Cell division protein ftsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28] D Pvag_3090 yebN; UPF0059 membrane protein K23242 mntP; manganese efflux pump family protein D Pvag_1744 efeU; Ferrous iron permease efeU K07243 FTR; high-affinity iron transporter D Pvag_1743 ycdO; UPF0409 protein ycdO precursor K07224 efeO; iron uptake system component EfeO D Pvag_1742 ycdB; Putative iron-dependent peroxidase ycdB precursor K16301 efeB; deferrochelatase/peroxidase EfeB [EC:1.11.1.-] D Pvag_2294 Putative NiCoT family transporter K08970 rcnA; nickel/cobalt transporter (NicO) family protein D Pvag_1479 cstA; Carbon starvation protein A K06200 cstA; carbon starvation protein D Pvag_0713 ybjE; Uncharacterized protein ybjE K28370 lysO; lysine exporter D Pvag_1516 tonB; TonB protein K03832 tonB; periplasmic protein TonB D Pvag_0561 pal; Peptidoglycan-associated lipoprotein precursor K03640 pal; peptidoglycan-associated lipoprotein D Pvag_0559 tolA; TolA protein K03646 tolA; colicin import membrane protein D Pvag_0560 tolB; Protein tolB precursor K03641 tolB; TolB protein D Pvag_2968 mdcA; malonate decarboxylase, alpha subunit K13929 mdcA; malonate decarboxylase alpha subunit [EC:2.3.1.187] D Pvag_2970 mdcC; Malonate decarboxylase acyl carrier protein K13931 mdcC; malonate decarboxylase delta subunit D Pvag_2413 narG; nitrate reductase alpha chain K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-] D Pvag_2412 narH; nitrate reductase beta chain K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-] D Pvag_2410 narI; respiratory nitrate reductase 1 gamma chain K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-] D Pvag_3327 fdnG; formate dehydrogenase, major subunit (formate dehydrogenase alpha subunit) K08348 fdnG; formate dehydrogenase-N, alpha subunit [EC:1.17.5.3] D Pvag_1907 bisc1; probable molybdopterin oxidoreductase K08351 bisC; biotin/methionine sulfoxide reductase [EC:1.-.-.-] D Pvag_3702 bisc3; putative biotin sulfoxide reductas2 K08351 bisC; biotin/methionine sulfoxide reductase [EC:1.-.-.-] D Pvag_pPag30198 bisC; oxidoreductase, molybdopterin-binding protein K08351 bisC; biotin/methionine sulfoxide reductase [EC:1.-.-.-] D Pvag_0667 emra1; Multidrug resistance protein A K03543 emrA; membrane fusion protein, multidrug efflux system D Pvag_2174 emra3; Multidrug resistance protein A K03543 emrA; membrane fusion protein, multidrug efflux system D Pvag_2363 emra5; multidrug resistance efflux transporter emrA K03543 emrA; membrane fusion protein, multidrug efflux system D Pvag_2073 cyad1; Putative type I secretion membrane fusion protein cyaD K12542 lapC; membrane fusion protein, adhesin transport system D Pvag_3769 cyad3; putative type I secretion membrane fusion protein K12542 lapC; membrane fusion protein, adhesin transport system D Pvag_pPag10095 cvaA; putative type I secretion membrane fusion protein K13408 cvaA; membrane fusion protein D Pvag_0404 acrA; Acriflavine resistance protein A K03585 acrA; membrane fusion protein, multidrug efflux system D Pvag_pPag30420 hlyD; Putative RND efflux system, periplasmic membrane-fusion protein precursor K03585 acrA; membrane fusion protein, multidrug efflux system D Pvag_pPag10115 putative RND efflux membrane fusion protein precursor K21137 triB; membrane fusion protein, multidrug efflux system D Pvag_1265 Putative RND efflux system, membrane-fusion protein K19586 oqxA; membrane fusion protein, multidrug efflux system D Pvag_1996 yegM; Putative transport protein yegM precursor K07799 mdtA; membrane fusion protein, multidrug efflux system D Pvag_3704 Putative RND efflux system, membrane-fusion protein K07799 mdtA; membrane fusion protein, multidrug efflux system D Pvag_2815 aaeA; putative p-hydroxybenzoic acid efflux pump aaeA K15548 aaeA; p-hydroxybenzoic acid efflux pump subunit AaeA D Pvag_1982 wzc; putative tyrosine-protein kinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3] D Pvag_2741 yraP; Uncharacterized protein precursor K28369 dolP; outer membrane lipoprotein DolP D Pvag_0570 pnuC; Nicotinamide mononucleotide transporter protein pnuC K03811 pnuC; nicotinamide mononucleotide transporter D Pvag_pPag10043 feoA; Ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A D Pvag_pPag10044 feoB; Ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B D Pvag_3558 sbmA; Protein sbmA K17938 sbmA; peptide/bleomycin uptake transporter D Pvag_0772 pqiA; Paraquat-inducible protein A K03808 pqiA; intermembrane transport protein PqiA/LetA D Pvag_1607 yebS; Inner membrane protein yebS K03808 pqiA; intermembrane transport protein PqiA/LetA D Pvag_0773 pqib1; Paraquat-inducible protein B K06192 pqiB; intermembrane transport protein PqiB/LetB D Pvag_1608 pqib3; Uncharacterized protein yebT K06192 pqiB; intermembrane transport protein PqiB/LetB D Pvag_0774 ymbA; Uncharacterized lipoprotein ymbA precursor K09857 pqiC; intermembrane transport lipoprotein PqiC D Pvag_3051 uspB; Universal stress protein B K06144 uspB; universal stress protein B D Pvag_3615 hypothetical protein K16348 ecnB; entericidin B D Pvag_2156 ccmF; Cytochrome c-type biogenesis protein ccmF K02198 ccmF; cytochrome c-type biogenesis protein CcmF D Pvag_1440 yhiD; Putative MgtC family transporter K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein D Pvag_0261 yedx1; Transthyretin-like protein precursor K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17] D Pvag_1337 yedx3; Transthyretin-like protein precursor K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17] D Pvag_1648 copD; Putative CopD family transporter K07245 pcoD; copper resistance protein D C 02044 Secretion system [BR:pva02044] D Pvag_2650 tolC; Outer membrane protein tolC precursor K12340 tolC; outer membrane protein D Pvag_pPag10094 Putative efflux pump outer membrane protein precursor K12340 tolC; outer membrane protein D Pvag_2074 cyab1; Cytoplasmic membrane export protein, ATP-binding protein K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D Pvag_3770 cyab3; putative type I secretion system ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D Pvag_2073 cyad1; Putative type I secretion membrane fusion protein cyaD K12542 lapC; membrane fusion protein, adhesin transport system D Pvag_3769 cyad3; putative type I secretion membrane fusion protein K12542 lapC; membrane fusion protein, adhesin transport system D Pvag_2075 cyaE; Putative outer membrane protein precursor K12543 lapE; outer membrane protein, adhesin transport system D Pvag_3771 putative type I secretion outer membrane protein precursor K12543 lapE; outer membrane protein, adhesin transport system D Pvag_pPag10095 cvaA; putative type I secretion membrane fusion protein K13408 cvaA; membrane fusion protein D Pvag_pPag10096 cvaB; putative type I secretion system ATPase K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB D Pvag_2281 pilF; Uncharacterized protein precursor K02656 pilF; type IV pilus assembly protein PilF D Pvag_2564 yggR; twitching motility protein K02669 pilT; twitching motility protein PilT D Pvag_2499 Prepilin peptidase-dependent protein A precursor K02679 ppdA; prepilin peptidase dependent protein A D Pvag_2498 ppdB; Prepilin peptidase-dependent protein B precursor K02680 ppdB; prepilin peptidase dependent protein B D Pvag_2496 hypothetical protein K02681 ppdC; prepilin peptidase dependent protein C D Pvag_0139 ppdD; Prepilin peptidase-dependent protein D precursor K02682 ppdD; prepilin peptidase dependent protein D D Pvag_0138 hofB; Protein transport protein hofB K02504 hofB; protein transport protein HofB D Pvag_0137 hofC; Protein transport protein hofC K02505 hofC; protein transport protein HofC D Pvag_2942 yrfD; Uncharacterized protein yrfD K12288 hofM; pilus assembly protein HofM D Pvag_2941 hypothetical protein K12289 hofN; pilus assembly protein HofN D Pvag_2940 hypothetical protein K12290 hofO; pilus assembly protein HofO D Pvag_2939 hofQ; Type IV pilus biogenesis and competence protein pilQ precursor K02507 hofQ; protein transport protein HofQ D Pvag_2566 yggT; Uncharacterized protein in proC 3'region (ORF3) K02221 yggT; YggT family protein D Pvag_0382 ybaV; Protein yhgF K02237 comEA; competence protein ComEA D Pvag_0739 ycaI; Uncharacterized protein ycaI K02238 comEC; competence protein ComEC D Pvag_1717 flhA; Flagellar biosynthesis protein flhA K02400 flhA; flagellar biosynthesis protein FlhA D Pvag_1718 flhB; Flagellar biosynthetic protein flhB K02401 flhB; flagellar biosynthesis protein FlhB D Pvag_1786 fliF; Flagellar M-ring protein K02409 fliF; flagellar M-ring protein FliF D Pvag_1788 fliH; Flagellar assembly protein fliH K02411 fliH; flagellar assembly protein FliH D Pvag_1789 fliI; flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D Pvag_1794 fliN; Flagellar motor switch protein fliN K02417 fliN; flagellar motor switch protein FliN D Pvag_1795 fliO; Probable flagellar protein fliO K02418 fliO; flagellar protein FliO/FliZ D Pvag_1796 fliP; Flagellar biosynthetic protein fliP K02419 fliP; flagellar biosynthesis protein FliP D Pvag_1797 fliQ; Probable flagellar biosynthetic protein fliQ K02420 fliQ; flagellar biosynthesis protein FliQ D Pvag_1798 fliR; Flagellar biosynthetic protein fliR K02421 fliR; flagellar biosynthesis protein FliR D Pvag_2517 dsbC; protein disulfide isomerase II K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D Pvag_pPag10082 iga; IgA-specific serine endopeptidase K12684 esp; serine protease autotransporter [EC:3.4.21.-] D Pvag_pPag30470 estA; Putative outer membrane lipase/esterase precursor K12686 apeE; outer membrane lipase/esterase D Pvag_1025 Putative type VI secretion system, core protein K11891 impL; type VI secretion system protein ImpL D Pvag_1088 Putative type VI secretion system, core protein K11891 impL; type VI secretion system protein ImpL D Pvag_1024 Putative type VI secretion system, core protein K11892 impK; type VI secretion system protein ImpK D Pvag_1089 Putative type VI secretion system, core protein K11892 impK; type VI secretion system protein ImpK D Pvag_1023 Putative type VI secretion system, core protein K11893 impJ; type VI secretion system protein ImpJ D Pvag_1041 Putative type VI secretion system, core protein K11895 impH; type VI secretion system protein ImpH D Pvag_1040 Putative type VI secretion system, core protein K11896 impG; type VI secretion system protein ImpG D Pvag_1039 Putative type VI secretion system, core protein K11897 impF; type VI secretion system protein ImpF D Pvag_1029 Putative type VI secretion system, core protein K11900 impC; type VI secretion system protein ImpC D Pvag_1028 Putative type VI secretion system, core protein K11901 impB; type VI secretion system protein ImpB D Pvag_1027 Putative type VI secretion system, core protein K11902 impA; type VI secretion system protein ImpA D Pvag_1031 hcp; Putative type VI secretion system, effector protein hcp K11903 hcp; type VI secretion system secreted protein Hcp D Pvag_1044 vgrS; Putative type VI secretion system, effector protein vgrS K11904 vgrG; type VI secretion system secreted protein VgrG D Pvag_1022 Putative type VI secretion system, core protein K11906 vasD; type VI secretion system protein VasD D Pvag_1042 clpV; Putative type VI secretion system, core protein ATPase K11907 vasG; type VI secretion system protein VasG D Pvag_1026 Putative type VI secretion system-associated hypothetical protein K11890 impM; type VI secretion system protein ImpM D Pvag_1087 Putative type VI secretion system-associated hypothetical protein K11890 impM; type VI secretion system protein ImpM D Pvag_1038 Putative type VI secretion system-associated hypothetical protein K11898 impE; type VI secretion system protein ImpE D Pvag_1342 hifD; Minor fimbrial subunit hifD precursor K07345 fimA; major type 1 subunit fimbrin (pilin) D Pvag_3598 mrkD; Fimbria adhesin protein precursor K07345 fimA; major type 1 subunit fimbrin (pilin) D Pvag_3602 bcfA; Fimbrin-like protein fimI precursor K07345 fimA; major type 1 subunit fimbrin (pilin) D Pvag_pPag10089 Type-1 fimbrial protein, A chain precursor K07345 fimA; major type 1 subunit fimbrin (pilin) D Pvag_pPag10092 mrkD; Fimbria adhesin protein precursor K07345 fimA; major type 1 subunit fimbrin (pilin) D Pvag_pPag20199 mrkD; Fimbrin-like protein fimI precursor K07345 fimA; major type 1 subunit fimbrin (pilin) D Pvag_pPag20202 bcfF; Type-1 fimbrial protein, A chain precursor K07345 fimA; major type 1 subunit fimbrin (pilin) D Pvag_pPag30165 bcfE; Fimbrin-like protein fimI precursor K07345 fimA; major type 1 subunit fimbrin (pilin) D Pvag_pPag30168 Long polar fimbria protein A precursor K07345 fimA; major type 1 subunit fimbrin (pilin) D Pvag_2625 mrkB; Chaperone protein mrkB precursor K07346 fimC; fimbrial chaperone protein D Pvag_pPag20201 fimC; Uncharacterized fimbrial chaperone yraI precursor K07346 fimC; fimbrial chaperone protein D Pvag_pPag30166 yraI; Chaperone protein fimC precursor K07346 fimC; fimbrial chaperone protein D Pvag_1344 stbC; Outer membrane usher protein fimD precursor K07347 fimD; outer membrane usher protein D Pvag_2626 csuD; Outer membrane usher protein fimD precursor K07347 fimD; outer membrane usher protein D Pvag_3600 fimD; Outer membrane usher protein fimD precursor K07347 fimD; outer membrane usher protein D Pvag_pPag10091 fimD; Outer membrane usher protein fimD precursor K07347 fimD; outer membrane usher protein D Pvag_pPag20200 bcfC; Outer membrane usher protein fimD precursor K07347 fimD; outer membrane usher protein D Pvag_pPag30167 yraJ; Outer membrane usher protein fimD precursor K07347 fimD; outer membrane usher protein D Pvag_2623 csuA; hypothetical protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D Pvag_2624 csuB; hypothetical protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D Pvag_2627 csuE; hypothetical protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D Pvag_0130 secA; Preprotein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Pvag_3172 secB; Protein-export protein secB K03071 secB; preprotein translocase subunit SecB D Pvag_0348 secD; Protein-export membrane protein secD K03072 secD; preprotein translocase subunit SecD D Pvag_3461 secE; Preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D Pvag_0349 secF; Protein-export membrane protein secF K03074 secF; preprotein translocase subunit SecF D Pvag_3674 secG; Protein-export membrane protein secG K03075 secG; preprotein translocase subunit SecG D Pvag_0129 secM; Secretion monitor precursor K13301 secM; secretion monitor D Pvag_2868 secY; Preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D Pvag_2390 ffh; Signal recognition 54 kDa protein (SRP54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D Pvag_3011 ftsY; Cell division protein ftsY K03110 ftsY; fused signal recognition particle receptor D Pvag_0347 yajC; UPF0092 membrane protein yajC K03210 yajC; preprotein translocase subunit YajC D Pvag_3313 yidC; Inner membrane protein yidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D Pvag_3433 tatA; Sec-independent protein translocase protein tatA/E K03116 tatA; sec-independent protein translocase protein TatA D Pvag_3434 tatB; Sec-independent protein translocase protein tatB K03117 tatB; sec-independent protein translocase protein TatB D Pvag_3435 tatC; Sec-independent protein translocase protein tatC K03118 tatC; sec-independent protein translocase protein TatC D Pvag_0483 ybeC; Sec-independent protein translocase protein tatA/E K03425 tatE; sec-independent protein translocase protein TatE C 02042 Bacterial toxins [BR:pva02042] D Pvag_2392 corB; putative membrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D Pvag_2768 ytfL; UPF0053 protein yhdP K03699 tlyC; magnesium and cobalt exporter, CNNM family D Pvag_2523 yqfA; Adiponectin receptor protein 2 K11068 hlyIII; hemolysin III C 02022 Two-component system [BR:pva02022] D Pvag_0337 phoR; phosphate regulon sensor protein PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D Pvag_0336 phoB; Phosphate regulon transcriptional regulatory protein phoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D Pvag_0933 phoQ; sensor protein kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D Pvag_0934 phoP; Response regulator K07660 phoP; two-component system, OmpR family, response regulator PhoP D Pvag_2950 envZ; Osmolarity sensor protein EnvZ K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D Pvag_2951 ompr3; Two-component response regulator ompR K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR D Pvag_1428 rstB; two component sensor kinase K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3] D Pvag_1427 rstA; Probable transcriptional regulator K07661 rstA; two-component system, OmpR family, response regulator RstA D Pvag_3168 cpxA; probable sensor protein (histidine protein kinase), acting on ArcA K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3] D Pvag_3167 cpxr3; Transcriptional regulatory protein srrA K07662 cpxR; two-component system, OmpR family, response regulator CpxR D Pvag_2000 baeS; sensor protein (for BaeR) K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3] D Pvag_2001 baeR; Probable transcriptional regulator K07664 baeR; two-component system, OmpR family, response regulator BaeR D Pvag_1736 basS; two-component sensor kinase K07643 basS; two-component system, OmpR family, sensor histidine kinase BasS [EC:2.7.13.3] D Pvag_1735 basR; Transcriptional regulatory protein basR/pmrA K07771 basR; two-component system, OmpR family, response regulator BasR D Pvag_3247 ygiY; probable two-component system sensor histidine kinase K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] D Pvag_3246 ygiX; Transcriptional regulatory protein qseB K07666 qseB; two-component system, OmpR family, response regulator QseB D Pvag_3065 kdpD; sensor protein KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D Pvag_0530 kdpE; Alkaline phosphatase synthesis transcriptional regulatory protein sphR K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D Pvag_3628 arcB; aerobic respiration control sensor protein K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3] D Pvag_0060 arcA; Transcriptional regulatory protein yycF K07773 arcA; two-component system, OmpR family, aerobic respiration control protein ArcA D Pvag_2206 rssA; putative two-component system sensor kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D Pvag_3569 periplasmic sensor signal transduction histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D Pvag_2207 cpxr1; Probable transcriptional regulator K02483 K02483; two-component system, OmpR family, response regulator D Pvag_3570 Probable transcriptional regulator K02483 K02483; two-component system, OmpR family, response regulator D Pvag_2415 narL; Nitrate/nitrite response regulator protein K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL D Pvag_2225 narQ; sensor for nitrate reductase system K07674 narQ; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarQ [EC:2.7.13.3] D Pvag_2226 narP; Nitrate/nitrite response regulator protein narP K07685 narP; two-component system, NarL family, nitrate/nitrite response regulator NarP D Pvag_2084 rcsC; two component sensor kinase/response regulator protein RcsC K07677 rcsC; two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:2.7.13.3] D Pvag_2082 yojN; putative two-component system sensor kinase K07676 rcsD; two-component system, NarL family, sensor histidine kinase RcsD [EC:2.7.13.3] D Pvag_2083 rcsB; Capsule synthesis two component response regulator rcsB K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB D Pvag_2463 barA; hybrid sensory histidine kinase K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3] D Pvag_0813 uvrY; putative 2-component transcriptional regulator K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY D Pvag_0572 sensory box histidine kinase/response regulator K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3] D Pvag_0573 fimZ; Fimbriae Z protein K07688 fimZ; two-component system, NarL family, response regulator, fimbrial Z protein, FimZ D Pvag_pPag30234 dcuS; putative 2-component sensor protein K07701 dcuS; two-component system, CitB family, sensor histidine kinase DcuS [EC:2.7.13.3] D Pvag_pPag30233 dcuR; Putative two-component response regulator K07703 dcuR; two-component system, CitB family, response regulator DcuR D Pvag_2177 ypdA; putative sensor protein K27884 pyrS; two-component system, LytTR family, high-concentration pyruvate sensor kinase [EC:2.7.13.3] D Pvag_2178 ypdB; Uncharacterized response regulatory protein K27885 pyrR; two-component system, LytTR family, high-concentration pyruvate response regulator D Pvag_3224 glnL; histidine protein kinase sensor for GlnG regulator (nitrogen regulator II, NRII) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D Pvag_3225 glnG; Transcriptional regulatory protein glnG K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG D Pvag_2304 yfhK; two-component system sensor kinase K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3] D Pvag_2302 yfhA; putative 2-component transcriptional regulator yfhA K07715 glrR; two-component system, NtrC family, response regulator GlrR D Pvag_1727 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Pvag_1720 cheY; Chemotaxis protein cheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Pvag_1721 cheB; Chemotaxis response regulator, CheB type K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Pvag_0292 cheV; putative chemotaxis signal transduction protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D Pvag_1538 rrsB; RrsB K02485 rssB; two-component system, response regulator C 02035 Bacterial motility proteins [BR:pva02035] D Pvag_1727 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Pvag_1726 cheW; Chemotaxis protein cheW K03408 cheW; purine-binding chemotaxis protein CheW D Pvag_1722 cheR; chemotaxis protein methyltransferase cheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Pvag_1721 cheB; Chemotaxis response regulator, CheB type K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Pvag_1720 cheY; Chemotaxis protein cheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Pvag_1719 cheZ; Chemotaxis protein cheZ K03414 cheZ; chemotaxis protein CheZ D Pvag_pPag30053 cheZ; Methionyl-tRNA synthetase K03414 cheZ; chemotaxis protein CheZ D Pvag_0292 cheV; putative chemotaxis signal transduction protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D Pvag_0291 tse1; Methyl-accepting chemotaxis serine transducer K03406 mcp; methyl-accepting chemotaxis protein D Pvag_0630 tar1; Methyl-accepting chemotaxis protein I K03406 mcp; methyl-accepting chemotaxis protein D Pvag_1107 Biofilm dispersion protein bdlA K03406 mcp; methyl-accepting chemotaxis protein D Pvag_1111 tse3; Methyl-accepting chemotaxis serine transducer K03406 mcp; methyl-accepting chemotaxis protein D Pvag_1203 tsr1; Methyl-accepting chemotaxis protein IV K03406 mcp; methyl-accepting chemotaxis protein D Pvag_1413 trg1; Methyl-accepting chemotaxis protein III K03406 mcp; methyl-accepting chemotaxis protein D Pvag_2599 Biofilm dispersion protein bdlA K03406 mcp; methyl-accepting chemotaxis protein D Pvag_2781 tar; Methyl-accepting chemotaxis protein mcpA (H1) K03406 mcp; methyl-accepting chemotaxis protein D Pvag_pPag10014 tar3; Laminin-like protein epi-1 precursor K03406 mcp; methyl-accepting chemotaxis protein D Pvag_pPag10136 tcp; Aerotaxis receptor K03406 mcp; methyl-accepting chemotaxis protein D Pvag_pPag20061 Methyl-accepting chemotaxis protein III K03406 mcp; methyl-accepting chemotaxis protein D Pvag_pPag30079 tse; Methyl-accepting chemotaxis serine transducer K03406 mcp; methyl-accepting chemotaxis protein D Pvag_pPag30137 tsr; Methyl-accepting chemotaxis protein I K03406 mcp; methyl-accepting chemotaxis protein D Pvag_pPag30316 HTH-type transcriptional regulator K03406 mcp; methyl-accepting chemotaxis protein D Pvag_pPag30481 Putative sensory transducer protein K03406 mcp; methyl-accepting chemotaxis protein D Pvag_1723 tsr3; Methyl-accepting chemotaxis signal transducer K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D Pvag_1724 tsr5; Methyl-accepting chemotaxis protein I K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D Pvag_1725 tsr7; Methyl-accepting chemotaxis protein IV K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D Pvag_2761 tse5; Methyl-accepting chemotaxis serine transducer K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D Pvag_1911 tar3; Methyl-accepting chemotaxis citrate transducer K05875 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor D Pvag_pPag20206 trg; Methyl-accepting chemotaxis citrate transducer K05875 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor D Pvag_1475 trg3; Methyl-accepting chemotaxis protein I K05876 trg; methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor D Pvag_1800 trg5; Methyl-accepting chemotaxis protein III K05876 trg; methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor D Pvag_3553 tse7; Methyl-accepting chemotaxis serine transducer K03776 aer; aerotaxis receptor D Pvag_1788 fliH; Flagellar assembly protein fliH K02411 fliH; flagellar assembly protein FliH D Pvag_1789 fliI; flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D Pvag_1790 fliJ; Flagellar fliJ protein K02413 fliJ; flagellar protein FliJ D Pvag_1795 fliO; Probable flagellar protein fliO K02418 fliO; flagellar protein FliO/FliZ D Pvag_1796 fliP; Flagellar biosynthetic protein fliP K02419 fliP; flagellar biosynthesis protein FliP D Pvag_1797 fliQ; Probable flagellar biosynthetic protein fliQ K02420 fliQ; flagellar biosynthesis protein FliQ D Pvag_1798 fliR; Flagellar biosynthetic protein fliR K02421 fliR; flagellar biosynthesis protein FliR D Pvag_1717 flhA; Flagellar biosynthesis protein flhA K02400 flhA; flagellar biosynthesis protein FlhA D Pvag_1718 flhB; Flagellar biosynthetic protein flhB K02401 flhB; flagellar biosynthesis protein FlhB D Pvag_1716 flhE; Flagellar protein flhE precursor K03516 flhE; flagellar protein FlhE D Pvag_1787 fliG; Flagellar motor switch protein fliG K02410 fliG; flagellar motor switch protein FliG D Pvag_1793 fliM; Flagellar motor switch protein fliM K02416 fliM; flagellar motor switch protein FliM D Pvag_1794 fliN; Flagellar motor switch protein fliN K02417 fliN; flagellar motor switch protein FliN D Pvag_1786 fliF; Flagellar M-ring protein K02409 fliF; flagellar M-ring protein FliF D Pvag_0882 flgI; Flagellar P-ring protein precursor K02394 flgI; flagellar P-ring protein FlgI D Pvag_0874 flgA; Flagella basal body P-ring formation protein flgA precursor K02386 flgA; flagellar basal body P-ring formation protein FlgA D Pvag_0881 flgH; Flagellar L-ring protein precursor K02393 flgH; flagellar L-ring protein FlgH D Pvag_1792 fliL; Flagellar fliL protein K02415 fliL; flagellar protein FliL D Pvag_1785 fliE; Putative lagellar hook-basal body complex protein fliE K02408 fliE; flagellar hook-basal body complex protein FliE D Pvag_1791 fliK; Probable flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK D Pvag_0875 flgB; Flagellar basal-body rod protein flgB K02387 flgB; flagellar basal-body rod protein FlgB D Pvag_0876 flgC; Flagellar basal-body rod protein flgC K02388 flgC; flagellar basal-body rod protein FlgC D Pvag_0877 flgD; Basal-body rod modification protein flgD K02389 flgD; flagellar basal-body rod modification protein FlgD D Pvag_0879 flgF; Flagellar basal-body rod protein flgF K02391 flgF; flagellar basal-body rod protein FlgF D Pvag_0880 flgG; Flagellar basal-body rod protein flgG K02392 flgG; flagellar basal-body rod protein FlgG D Pvag_0883 flgJ; flagellar biosynthesis K02395 flgJ; peptidoglycan hydrolase FlgJ D Pvag_0878 flgE; Flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE D Pvag_0884 flgK; Flagellar hook-associated protein 1 (HAP1) K02396 flgK; flagellar hook-associated protein 1 D Pvag_0885 flgL; Flagellar hook-associated protein 3 (HAP3) K02397 flgL; flagellar hook-associated protein 3 FlgL D Pvag_0872 flgN; Flagella synthesis protein flgN K02399 flgN; flagellar biosynthesis protein FlgN D Pvag_1759 fliB; Lysine-N-methylase fliB K18475 fliB; lysine-N-methylase [EC:2.1.1.-] D Pvag_1760 fliC; Flagellin (Flagellin core protein) K02406 fliC; flagellin D Pvag_pPag10122 fliC; Flagellin K02406 fliC; flagellin D Pvag_1761 fliD; Flagellar hook-associated protein 2 K02407 fliD; flagellar hook-associated protein 2 D Pvag_1762 fliS; Flagellar protein fliS K02422 fliS; flagellar secretion chaperone FliS D Pvag_1763 fliT; Flagellar protein fliT K02423 fliT; flagellar protein FliT D Pvag_1731 flhD; Transcriptional activator flhD K02403 flhD; flagellar transcriptional activator FlhD D Pvag_1730 flhC; Flagellar transcriptional activator flhC K02402 flhC; flagellar transcriptional activator FlhC D Pvag_1756 fliA; RNA polymerase sigma factor for flagellar operon K02405 fliA; RNA polymerase sigma factor FliA D Pvag_1729 motA; Chemotaxis protein motA (Motility protein A) K02556 motA; chemotaxis protein MotA D Pvag_1728 motB; Chemotaxis protein motB (Motility protein B) K02557 motB; chemotaxis protein MotB D Pvag_1753 fliY; Putative ABC transport system, periplasmic protein precursor K02424 tcyA; L-cystine transport system substrate-binding protein D Pvag_1755 fliZ; Protein fliZ K02425 fliZ; regulator of sigma S factor FliZ D Pvag_0873 flgM; Negative regulator of flagellin synthesis K02398 flgM; negative regulator of flagellin synthesis FlgM D Pvag_2564 yggR; twitching motility protein K02669 pilT; twitching motility protein PilT D Pvag_2281 pilF; Uncharacterized protein precursor K02656 pilF; type IV pilus assembly protein PilF D Pvag_1342 hifD; Minor fimbrial subunit hifD precursor K07345 fimA; major type 1 subunit fimbrin (pilin) D Pvag_3598 mrkD; Fimbria adhesin protein precursor K07345 fimA; major type 1 subunit fimbrin (pilin) D Pvag_3602 bcfA; Fimbrin-like protein fimI precursor K07345 fimA; major type 1 subunit fimbrin (pilin) D Pvag_pPag10089 Type-1 fimbrial protein, A chain precursor K07345 fimA; major type 1 subunit fimbrin (pilin) D Pvag_pPag10092 mrkD; Fimbria adhesin protein precursor K07345 fimA; major type 1 subunit fimbrin (pilin) D Pvag_pPag20199 mrkD; Fimbrin-like protein fimI precursor K07345 fimA; major type 1 subunit fimbrin (pilin) D Pvag_pPag20202 bcfF; Type-1 fimbrial protein, A chain precursor K07345 fimA; major type 1 subunit fimbrin (pilin) D Pvag_pPag30165 bcfE; Fimbrin-like protein fimI precursor K07345 fimA; major type 1 subunit fimbrin (pilin) D Pvag_pPag30168 Long polar fimbria protein A precursor K07345 fimA; major type 1 subunit fimbrin (pilin) D Pvag_2625 mrkB; Chaperone protein mrkB precursor K07346 fimC; fimbrial chaperone protein D Pvag_pPag20201 fimC; Uncharacterized fimbrial chaperone yraI precursor K07346 fimC; fimbrial chaperone protein D Pvag_pPag30166 yraI; Chaperone protein fimC precursor K07346 fimC; fimbrial chaperone protein D Pvag_1344 stbC; Outer membrane usher protein fimD precursor K07347 fimD; outer membrane usher protein D Pvag_2626 csuD; Outer membrane usher protein fimD precursor K07347 fimD; outer membrane usher protein D Pvag_3600 fimD; Outer membrane usher protein fimD precursor K07347 fimD; outer membrane usher protein D Pvag_pPag10091 fimD; Outer membrane usher protein fimD precursor K07347 fimD; outer membrane usher protein D Pvag_pPag20200 bcfC; Outer membrane usher protein fimD precursor K07347 fimD; outer membrane usher protein D Pvag_pPag30167 yraJ; Outer membrane usher protein fimD precursor K07347 fimD; outer membrane usher protein D Pvag_2623 csuA; hypothetical protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D Pvag_2624 csuB; hypothetical protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D Pvag_2627 csuE; hypothetical protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:pva04812] D Pvag_2824 mreB; Rod shape-determining protein mreB K03569 mreB; rod shape-determining protein MreB and related proteins D Pvag_0126 ftsZ; Cell division protein ftsZ K03531 ftsZ; cell division protein FtsZ D Pvag_0125 ftsA; Cell division protein ftsA K03590 ftsA; cell division protein FtsA D Pvag_1571 minC; Septum site-determining protein minC K03610 minC; septum site-determining protein MinC D Pvag_1572 minD; Septum site-determining protein minD K03609 minD; septum site-determining protein MinD D Pvag_1573 minE; cell division topological specificity factor K03608 minE; cell division topological specificity factor D Pvag_pPag10158 parA; Plasmid partition protein A K03496 parA; chromosome partitioning protein D Pvag_pPag30531 parA; Plasmid segregation protein A K03496 parA; chromosome partitioning protein D Pvag_0946 Probable chromosome-partitioning protein parB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Pvag_2417 parb1; partitioning protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Pvag_pPag10157 parB; Chromosome-partitioning protein parB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Pvag_pPag20007 parB; plasmid partitioning protein parB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Pvag_pPag30530 parB; Plasmid Partition par B protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:pva04147] D Pvag_0414 htpG; Chaperone protein htpG K04079 HSP90A; molecular chaperone HtpG D Pvag_0973 eno1; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Pvag_2458 eno3; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Pvag_1552 gapA; glyceraldehyde-3-phosphate dehydrogenase A K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Pvag_2545 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D Pvag_1162 pykF; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Pvag_1657 pykA; pyruvate kinase II K00873 PK; pyruvate kinase [EC:2.7.1.40] D Pvag_2926 ppiA; peptidyl-prolyl cis-trans isomerase A (rotamase A) K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D Pvag_1280 acdP; renal dipeptidase family protein K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D Pvag_3611 groEL; 60 kDa chaperonin (groEL protein) K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Pvag_0071 dnaK; Chaperone protein dnaK K04043 dnaK; molecular chaperone DnaK D Pvag_3498 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Pvag_pPag30408 hypothetical protein K01053 gnl; gluconolactonase [EC:3.1.1.17] D Pvag_2269 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D Pvag_2894 tufb1; elongation factor TU K02358 tuf; elongation factor Tu D Pvag_3460 tufb3; elongation factor Tu K02358 tuf; elongation factor Tu D Pvag_0905 ycfF; Uncharacterized HIT-like protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D Pvag_2196 yfeH; Uncharacterized membrane protein yfeH K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7 D Pvag_1575 fadD; acyl-CoA synthetase (long-chain-fatty-acid--CoA ligase) K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D Pvag_0416 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D Pvag_0410 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D Pvag_3131 argH; Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D Pvag_3132 argG; Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D Pvag_2760 fbp; fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D Pvag_0578 galK; Galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D Pvag_2981 glgB; 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D Pvag_1006 glpk1; putative glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D Pvag_3152 glpk3; Glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D Pvag_3223 glnA; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Pvag_3037 hemB; 5-aminolevulinate dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D Pvag_2537 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D Pvag_pPag30144 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D Pvag_pPag30411 serA; putative D-isomer specific 2-hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D Pvag_3482 purH; phosphoribosylaminoimidazolecarboxamideformyltra nsferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D Pvag_0149 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Pvag_pPag30309 gdhA; glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D Pvag_1655 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D Pvag_3159 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D Pvag_0576 gpma1; Phosphoglycerate mutase 1 K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D Pvag_0972 gpma3; Phosphoglycerate mutase 1 K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D Pvag_3616 blc; Outer membrane lipoprotein blc precursor K03098 APOD; apolipoprotein D and lipocalin family protein C 02048 Prokaryotic defense system [BR:pva02048] D Pvag_3754 hsdR; type I restriction enzyme R protein K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D Pvag_3755 hsdS; type I restriction-modification system specificty subunit K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D Pvag_3756 hsdM; Type I restriction-modification system methyltransferase subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D Pvag_2935 dam; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D Pvag_0949 hypothetical protein K07319 yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D Pvag_1811 dcm; DNA cytosine methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Pvag_0446 yjiw1; hypothetical protein K19048 symE; toxic protein SymE D Pvag_0917 hypothetical protein K19048 symE; toxic protein SymE D Pvag_1820 hypothetical protein K19048 symE; toxic protein SymE D Pvag_3759 yjiw3; hypothetical protein K19048 symE; toxic protein SymE D Pvag_pPag10126 yefM; Antitoxin yefM K19159 yefM; antitoxin YefM D Pvag_1352 hipA; Protein hipA K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D Pvag_1353 hipB; Uncharacterized HTH-type transcriptional regulator ydcN K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB D Pvag_1458 pspC; Phage shock protein C K03973 pspC; phage shock protein C D Pvag_1459 pspB; Phage shock protein B K03970 pspB; phage shock protein B D Pvag_2724 ccdA; Protein ccdA (Protein letA) K19164 ccdA; antitoxin CcdA D Pvag_pPag30279 CC2985 family addiction module antidote protein K07746 parD1_3_4; antitoxin ParD1/3/4 D Pvag_pPag30212 yhhV; Uncharacterized protein yhhV K19165 phd; antitoxin Phd D Pvag_pPag30353 ygjN; Uncharacterized protein ygjN K19166 higB; mRNA interferase HigB [EC:3.1.-.-] D Pvag_pPag10128 Uncharacterized HTH-type transcriptional regulator ygjM K18831 higA; HTH-type transcriptional regulator / antitoxin HigA D Pvag_pPag30352 ygjM; Uncharacterized HTH-type transcriptional regulator ygjM K18831 higA; HTH-type transcriptional regulator / antitoxin HigA D Pvag_1715 ybaQ; Uncharacterized HTH-type transcriptional regulator ybaQ K21498 higA-1; antitoxin HigA-1 D Pvag_pPag10125 yddM; Uncharacterized HTH-type transcriptional regulator ybaQ K21498 higA-1; antitoxin HigA-1 D Pvag_1351 hypothetical protein K13655 mqsA; HTH-type transcriptional regulator / antitoxin MqsA D Pvag_2046 mvpA; Uncharacterized protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] D Pvag_2045 vagC; Virulence-associated protein vagC K18829 mvpT; antitoxin VapB D Pvag_0862 yceP; Biofilm regulator bssS K12148 bssS; biofilm regulator BssS D Pvag_1390 ycfr1; UPF0379 protein ybiM K12151 bhsA; multiple stress resistance protein BhsA D Pvag_1391 ycfr3; UPF0379 protein ybiM K12151 bhsA; multiple stress resistance protein BhsA D Pvag_0126 ftsZ; Cell division protein ftsZ K03531 ftsZ; cell division protein FtsZ D Pvag_2824 mreB; Rod shape-determining protein mreB K03569 mreB; rod shape-determining protein MreB and related proteins D Pvag_2640 parC; topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D Pvag_2645 parE; putative topoisomerase IV, subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D Pvag_2189 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Pvag_2520 hypothetical protein K19168 cptA; toxin CptA D Pvag_2521 ygfY; UPF0350 protein K09159 cptB; antitoxin CptB D Pvag_pPag30184 ydcX; Uncharacterized protein ydcX K28274 ortT; orphan toxin OrtT D Pvag_0396 hha; Hemolysin expression-modulating protein K05839 hha; haemolysin expression modulating protein D Pvag_pPag20091 ydgT; Hemolysin expression-modulating protein K05839 hha; haemolysin expression modulating protein D Pvag_0397 ybaJ; Uncharacterized protein ybaJ K19162 tomB; hha toxicity modulator TomB D Pvag_2289 yfhO; putative L-cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels [BR:pva04040] C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules [BR:pva04090] C 01504 Antimicrobial resistance genes [BR:pva01504] D Pvag_1658 mdfA; Multidrug resistance protein mdfA K08160 mdfA; MFS transporter, DHA1 family, multidrug/chloramphenicol efflux transport protein D Pvag_pPag30342 dfoS; Putative siderophore MFS transporter K08160 mdfA; MFS transporter, DHA1 family, multidrug/chloramphenicol efflux transport protein D Pvag_1857 sat; acetyltransferase, CysE/LacA/LpxA/NodL family K18234 vat; virginiamycin A acetyltransferase [EC:2.3.1.-] D Pvag_pPag30396 bla; beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6] D Pvag_0447 vanX; D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D Pvag_0933 phoQ; sensor protein kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D Pvag_0934 phoP; Response regulator K07660 phoP; two-component system, OmpR family, response regulator PhoP D Pvag_0404 acrA; Acriflavine resistance protein A K03585 acrA; membrane fusion protein, multidrug efflux system D Pvag_pPag30420 hlyD; Putative RND efflux system, periplasmic membrane-fusion protein precursor K03585 acrA; membrane fusion protein, multidrug efflux system D Pvag_0403 acrb1; acriflavine resistance protein B K18138 acrB; multidrug efflux pump D Pvag_pPag10023 Putative RND superfamily transporter K18138 acrB; multidrug efflux pump D Pvag_pPag30419 mexB; Putative RND efflux system, inner membrane transporter component K18138 acrB; multidrug efflux pump D Pvag_0830 oprM; Probable RND efflux system, outer membrane protein precursor K18139 oprM; outer membrane protein, multidrug efflux system D Pvag_3707 putative RND efflux system, outer membrane protein precursor K18139 oprM; outer membrane protein, multidrug efflux system D Pvag_pPag30418 ibeB; putative RND efflux system, outer membrane lipoprotein precursor K18139 oprM; outer membrane protein, multidrug efflux system D Pvag_0426 cueR; HTH-type transcriptional regulator cueR K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D Pvag_2650 tolC; Outer membrane protein tolC precursor K12340 tolC; outer membrane protein D Pvag_pPag10094 Putative efflux pump outer membrane protein precursor K12340 tolC; outer membrane protein D Pvag_1336 Uncharacterized HTH-type transcriptional regulator yhjC K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC D Pvag_1266 marA; HTH-type transcriptional activator rhaR K13632 marA; AraC family transcriptional regulator, mar-sox-rob regulon activator D Pvag_3571 rama3; Transcriptional activator ramA K13632 marA; AraC family transcriptional regulator, mar-sox-rob regulon activator D Pvag_0755 ompf1; Outer membrane pore protein F precursor K09476 ompF; outer membrane pore protein F D Pvag_1113 ompf3; Outer membrane porin protein precursor K09476 ompF; outer membrane pore protein F C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins [BR:pva00536] D Pvag_0913 filamentous hemagglutinin family outer membrane protein K15125 fhaB; filamentous hemagglutinin D Pvag_1821 hpmA; Putative AT-2 family transporter precursor K15125 fhaB; filamentous hemagglutinin C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:pva00537] D Pvag_1012 treA; trehalase, periplasmic K01194 TREH; alpha,alpha-trehalase [EC:3.2.1.28] D Pvag_2594 treF; cytoplasmic trehalase K01194 TREH; alpha,alpha-trehalase [EC:3.2.1.28] D Pvag_1280 acdP; renal dipeptidase family protein K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins [BR:pva03200] D Pvag_1701 ybcT; putative endopeptidase K14744 rzpD; prophage endopeptidase [EC:3.4.-.-] C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:pva03100] D Pvag_2185 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Pvag_2186 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Pvag_2374 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Pvag_3119 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Pvag_3449 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Pvag_0443 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Pvag_2163 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Pvag_2397 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Pvag_2398 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Pvag_2399 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Pvag_3394 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Pvag_1816 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Pvag_1897 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Pvag_1918 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Pvag_0236 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Pvag_0244 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Pvag_3116 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Pvag_0817 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D Pvag_0509 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Pvag_0510 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Pvag_0512 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Pvag_0513 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Pvag_0233 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Pvag_2845 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Pvag_3236 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Pvag_3484 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Pvag_0816 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Pvag_2799 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Pvag_2800 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Pvag_2801 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Pvag_3458 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Pvag_3395 tRNA-His K14226 tRNA-His; tRNA His D Pvag_2375 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Pvag_3120 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Pvag_3448 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Pvag_0028 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Pvag_0029 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Pvag_0030 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Pvag_0514 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Pvag_0818 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Pvag_3396 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Pvag_3675 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Pvag_3753 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Pvag_0563 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Pvag_0564 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Pvag_0565 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Pvag_2193 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Pvag_0511 tRNA-Met K14230 tRNA-Met; tRNA Met D Pvag_0515 tRNA-Met K14230 tRNA-Met; tRNA Met D Pvag_2486 tRNA-Met K14230 tRNA-Met; tRNA Met D Pvag_2487 tRNA-Met K14230 tRNA-Met; tRNA Met D Pvag_2488 tRNA-Met K14230 tRNA-Met; tRNA Met D Pvag_2672 tRNA-Met K14230 tRNA-Met; tRNA Met D Pvag_3676 tRNA-Met K14230 tRNA-Met; tRNA Met D Pvag_2598 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D Pvag_3603 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D Pvag_2064 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Pvag_3346 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Pvag_3397 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Pvag_0793 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Pvag_0794 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Pvag_1740 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Pvag_2400 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Pvag_0289 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Pvag_2842 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Pvag_3456 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Pvag_3459 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Pvag_3115 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D Pvag_1541 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D Pvag_1542 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D Pvag_3457 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D Pvag_1163 tRNA-Val K14237 tRNA-Val; tRNA Val D Pvag_1164 tRNA-Val K14237 tRNA-Val; tRNA Val D Pvag_1165 tRNA-Val K14237 tRNA-Val; tRNA Val D Pvag_2190 tRNA-Val K14237 tRNA-Val; tRNA Val D Pvag_2191 tRNA-Val K14237 tRNA-Val; tRNA Val D Pvag_2192 tRNA-Val K14237 tRNA-Val; tRNA Val D Pvag_0232 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Pvag_2376 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Pvag_2846 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Pvag_3121 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Pvag_3237 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Pvag_3447 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Pvag_3483 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Pvag_0234 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Pvag_2373 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Pvag_2844 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Pvag_3118 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Pvag_3235 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Pvag_3450 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Pvag_3485 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Pvag_0235 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Pvag_2372 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Pvag_2841 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Pvag_2843 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Pvag_3117 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Pvag_3234 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Pvag_3451 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Pvag_3486 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D Pvag_2637 yqhE; putative aldo/keto reductase family protein K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346] D Pvag_0162 pdxa3; PdxA-like protein K22024 pdxA2; 4-phospho-D-threonate 3-dehydrogenase / 4-phospho-D-erythronate 3-dehydrogenase [EC:1.1.1.408 1.1.1.409] D Pvag_1942 ygbJ; putative dehydrogenase K08319 ltnD; L-threonate 2-dehydrogenase [EC:1.1.1.411] D Pvag_2181 tas3; Uncharacterized protein yghZ K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-] D Pvag_0683 yliI; Soluble aldose sugar dehydrogenase yliI precursor K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-] D Pvag_0358 yajO; putative NAD(P)H-dependent xylose reductase K23107 yajO; 1-deoxyxylulose-5-phosphate synthase [EC:1.1.-.-] D Pvag_2717 fadH; 2,4-dienoyl-CoA reductase K00219 fadH; 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34] D Pvag_1329 yncB; putative oxidoreductase K23256 curA; NADPH-dependent curcumin reductase [EC:1.3.1.-] D Pvag_1284 pqqC; Pyrroloquinoline-quinone synthase K06137 pqqC; pyrroloquinoline-quinone synthase [EC:1.3.3.11] D Pvag_0005 faoD; putative fructosyl-amino acid oxidase K25952 socD; fructosyl amine oxidase (glucosone-forming) [EC:1.5.3.25] D Pvag_0861 solA; sarcosine oxidase-like protein K02846 solA; N-methyl-L-tryptophan oxidase [EC:1.5.3.-] D Pvag_3521 qor; quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D Pvag_2642 mdaB; putative NAD(P)H dehydrogenase (quinone) K03923 mdaB; NADPH dehydrogenase (quinone) [EC:1.6.5.10] D Pvag_pPag20187 yqjM; NADH oxidase K00354 E1.6.99.1; NADPH2 dehydrogenase [EC:1.6.99.1] D Pvag_pPag30075 yqjM; NADH oxidase K00354 E1.6.99.1; NADPH2 dehydrogenase [EC:1.6.99.1] D Pvag_1434 acpD; Acyl carrier protein phosphodiesterase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17] D Pvag_pPag30093 acpD; Acyl carrier protein phosphodiesterase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17] D Pvag_2013 ahpF; alkyl hydroperoxide reductase subunit F K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-] D Pvag_1739 msrA; Peptide methionine sulfoxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D Pvag_1551 yeaA; peptide methionine sulfoxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] D Pvag_3592 yghU; Uncharacterized GST-like protein yghU K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-] D Pvag_2736 yqjG; Uncharacterized protein yqjG K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7] D Pvag_3078 putative glutathione S-transferase K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7] D Pvag_2827 yedY; Putative reductase K07147 msrP; methionine sulfoxide reductase catalytic subunit [EC:1.8.-.-] D Pvag_pPag30388 cybB; cytochrome b(561) K12262 cybB; superoxide oxidase [EC:1.10.3.17] D Pvag_1209 ydbD; Uncharacterized protein yjqC K07217 ydbD; manganese catalase [EC:1.11.1.6] D Pvag_pPag30256 cpoF; Predicted hydrolase or acyltransferase K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10] D Pvag_2238 bcp; bacterioferritin comigratory protein K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D Pvag_pPag30276 Alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D Pvag_1450 tpx; thiol peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D Pvag_2014 ahpC; alkyl hydroperoxide reductase, C22 subunit K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26] D Pvag_0302 osmC; Osmotically inducible protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28] D Pvag_3344 ohr; Uncharacterized protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28] D Pvag_2991 yhhW; Protein yhhW K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D Pvag_pPag30177 pirA; pirin domain-containing protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D Pvag_pPag30255 yhhW; Protein yhhW K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D Pvag_1853 hypothetical protein K21817 blh; beta-carotene 15,15'-dioxygenase [EC:1.13.11.63] D Pvag_2299 hmpA; flavohemoprotein K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17] D Pvag_pPag10050 Putative monooxygenase K20938 ladA; long-chain alkane monooxygenase [EC:1.14.14.28] D Pvag_pPag10056 Putative monooxygenase K20938 ladA; long-chain alkane monooxygenase [EC:1.14.14.28] D Pvag_pPag30332 ntaA; nitrilotriacetate monooxygenase component A K28525 cmoJ; N-acetyl-S-alkylcysteine sulfoxide monooxygenase [EC:1.14.14.-] D Pvag_2587 yqjH; Uncharacterized protein yqjH K07229 yqjH; ferric-chelate reductase (NADPH) [EC:1.16.1.9] D Pvag_2613 ftn; Ferritin-1 K02217 ftnA; ferritin [EC:1.16.3.2] D Pvag_0170 yacK; Blue copper oxidase cueO precursor K14588 cueO; cuproxidase [EC:1.16.3.4] D Pvag_3155 fpr; ferredoxin--NADP reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D Pvag_2249 yfgD; Regulatory protein spx K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1] D Pvag_1286 pqqE; Coenzyme PQQ synthesis protein E K06139 pqqE; PqqA peptide cyclase [EC:1.21.98.4] D Pvag_3698 nrdG; anaerobic ribonucleotide reductase activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4] D Pvag_0730 pflA; pyruvate formate lyase activating enzyme 1 K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D Pvag_2439 pcm; L-isoaspartate protein carboxylmethyltransferase type II K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D Pvag_1168 cfa; cyclopropane fatty acyl phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D Pvag_2406 tam; putative trans-aconitate methyltransferase K00598 tam; trans-aconitate 2-methyltransferase [EC:2.1.1.144] D Pvag_2260 hag1; Hemagglutinin 1 K16868 tehB; tellurite methyltransferase [EC:2.1.1.265] D Pvag_0852 ymdD; Glucans biosynthesis protein C K11941 mdoC; glucans biosynthesis protein C [EC:2.1.-.-] D Pvag_2975 mdcH; malonyl-CoA:acyl carrier protein transacylase, MdcH K13935 mdcH; malonate decarboxylase epsilon subunit [EC:2.3.1.39] D Pvag_0503 lnt; Apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D Pvag_2368 yfiQ; Uncharacterized protein yfiQ K09181 patZ; [protein]-L-lysine N-acetyltransferase [EC:2.3.1.338] D Pvag_3692 yhbS; putative acetyltransferase K03824 yhbS; putative acetyltransferase [EC:2.3.1.-] D Pvag_3718 yjgM; putative acetyltransferase K03828 yjgM; putative acetyltransferase [EC:2.3.1.-] D Pvag_pPag30389 IAA acetyltransferase K03829 yedL; putative acetyltransferase [EC:2.3.1.-] D Pvag_1904 Uncharacterized protein yxeL K24117 scmL; S-(2-succino)cysteine N-acetyltransferase [EC:2.3.1.-] D Pvag_pPag30073 yncA; putative acyltransferase K24217 mnaT; L-amino acid N-acyltransferase [EC:2.3.1.-] D Pvag_0719 aat; leucyl/phenylalanyl-tRNA-protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6] D Pvag_2956 ycjM; sucrose phosphorylase K22597 E2.4.1.352; glucosylglycerate phosphorylase [EC:2.4.1.352] D Pvag_3177 Glycogen synthase K00754 bshA; L-malate glycosyltransferase [EC:2.4.1.-] D Pvag_2969 mdcB; triphosphoribosyl-dephospho-CoA synthase K13930 mdcB; triphosphoribosyl-dephospho-CoA synthase [EC:2.4.2.52] D Pvag_2367 yfiP; Uncharacterized protein yfiP K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25] D Pvag_2501 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D Pvag_pPag10108 xylR; xylose operon regulatory protein-/glucose kinase-like protein K18673 bglK; beta-glucoside kinase [EC:2.7.1.85] D Pvag_2069 yojL; Thiamine biosynthesis lipoprotein apbE precursor K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D Pvag_pPag30232 apbE; Thiamine biosynthesis lipoprotein apbE precursor K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D Pvag_1941 ygbk3; Uncharacterized protein K21948 otnK; 3-dehydrotetronate 4-kinase [EC:2.7.1.217] D Pvag_0161 ygbk1; Uncharacterized protein K22129 dtnK; D-threonate/D-erythronate kinase [EC:2.7.1.219 2.7.1.220] D Pvag_1149 ydiA; UPF0085 protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33] D Pvag_2658 glnE; glutamate-ammonia-ligase adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89] D Pvag_0947 hypothetical protein K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D Pvag_2974 mdcG; malonate decarboxylase subunit, putative K13934 mdcG; phosphoribosyl-dephospho-CoA transferase [EC:2.7.7.66] D Pvag_1147 ydiU; UPF0061 protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108] D Pvag_0014 mdoB; phosphoglycerol transferase I K01002 mdoB; phosphoglycerol transferase [EC:2.7.8.20] D Pvag_3490 aceK; Isocitrate dehydrogenase kinase/phosphatase K00906 aceK; isocitrate dehydrogenase kinase/phosphatase [EC:2.7.11.5 3.1.3.-] D Pvag_1340 UPF0189 protein K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106] D Pvag_pPag20013 ymdB; conserved hypothetical protein, high-affinity ADP-ribose binding domain protein K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106] D Pvag_3665 fes; Enterochelin esterase K07214 fes; iron(III)-enterobactin esterase [EC:3.1.1.108] D Pvag_1414 bchE; putative esterase K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-] D Pvag_0556 ybgC; Acyl-CoA thioester hydrolase ybgC K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D Pvag_0840 hypothetical protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D Pvag_1610 pphA; serine/threonine protein phosphatase 1 K07313 pphA; serine/threonine protein phosphatase 1 [EC:3.1.3.16] D Pvag_pPag30431 ybiV; putative sugar phosphatase K07757 ybiV; sugar-phosphatase [EC:3.1.3.23] D Pvag_1503 trpH; Protein TrpH K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97] D Pvag_2146 sixA; phosphohistidine phosphatase K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-] D Pvag_2051 rtn1; Protein rtn K26148 K26148; c-di-GMP phosphodiesterase [EC:3.1.4.52] D Pvag_3034 rtn7; Uncharacterized protein ylaB K26148 K26148; c-di-GMP phosphodiesterase [EC:3.1.4.52] D Pvag_3367 yhjK; Protein yhjK K26149 K26149; c-di-GMP phosphodiesterase [EC:3.1.4.52] D Pvag_3070 Uncharacterized protein K25135 K25135; cyclic di-GMP phosphodiesterase [EC:3.1.4.-] D Pvag_2559 endA; DNA-specific endonuclease I K01150 endA; deoxyribonuclease I [EC:3.1.21.1] D Pvag_0901 ycfH; putative deoxyribonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D Pvag_2605 yjjV; putative deoxyribonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D Pvag_3436 tatD; cytoplasmic DNase K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D Pvag_0527 ybfF; hypothetical protein K01175 ybfF; esterase [EC:3.1.-.-] D Pvag_0279 yafA; Esterase yafA K11750 frsA; esterase FrsA [EC:3.1.-.-] D Pvag_3358 yhjM; putative endoglucanase K20542 bcsZ; endoglucanase [EC:3.2.1.4] D Pvag_0285 Putative phage-like lysozyme K01185 E3.2.1.17; lysozyme [EC:3.2.1.17] D Pvag_0952 E; Lysozyme K01185 E3.2.1.17; lysozyme [EC:3.2.1.17] D Pvag_1702 lycV; putative endolysin K01185 E3.2.1.17; lysozyme [EC:3.2.1.17] D Pvag_2694 nucD; putative lysozyme K01185 E3.2.1.17; lysozyme [EC:3.2.1.17] D Pvag_pPag30113 ganA; Putative periplasmic 1,4-beta-endogalactanase ganA K01224 E3.2.1.89; arabinogalactan endo-1,4-beta-galactosidase [EC:3.2.1.89] D Pvag_0903 rhiN; Putative glycosyl hydrolase rhiN K15532 yteR; unsaturated rhamnogalacturonyl hydrolase [EC:3.2.1.172] D Pvag_2855 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D Pvag_0480 ybeM; UPF0012 hydrolase ybeM K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128] D Pvag_2879 amidohydrolase K18456 E3.5.4.32; 8-oxoguanine deaminase [EC:3.5.4.32] D Pvag_3710 yjgF; UPF0076 protein K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10] D Pvag_pPag30506 hypothetical protein K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10] D Pvag_2659 ygiF; Uncharacterized protein ygiF K18446 ygiF; triphosphatase [EC:3.6.1.25] D Pvag_0386 cof; Uncharacterized protein yigL K11938 cof; HMP-PP phosphatase [EC:3.6.1.-] D Pvag_2222 yffH; Putative hydrolase yffH K12945 nudK; GDP-mannose pyrophosphatase NudK [EC:3.6.1.-] D Pvag_0888 yceF; Maf-like protein yceF K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-] D Pvag_3249 yieN; ATPase ravA K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D Pvag_1207 uvsE; UV DNA damage endonuclease K13281 uvsE; UV DNA damage endonuclease [EC:3.-.-.-] D Pvag_2971 mdcD; malonate decarboxylase, beta subunit K13932 mdcD; malonate decarboxylase beta subunit [EC:4.1.1.87] D Pvag_2972 mdcE; malonate decarboxylase gamma subunit K13933 mdcE; malonate decarboxylase gamma subunit [EC:4.1.1.87] D Pvag_1940 ygbL; Putative aldolase class 2 protein ygbL K22130 otnC; 3-dehydro-4-phosphotetronate decarboxylase [EC:4.1.1.104] D Pvag_2797 yjeF; Putative kinase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D Pvag_2482 sufS2; putative cysteine sulfinate desulfinase K01766 csdA; cysteine sulfinate desulfinase [EC:4.4.1.-] D Pvag_pPag20172 oxd; putative aldoxime dehydratase K13028 oxdA; aliphatic aldoxime dehydratase [EC:4.8.1.2] D Pvag_1393 yiiL; putative L-rhamnose 1-epimerase K03534 rhaM; L-rhamnose mutarotase [EC:5.1.3.32] D Pvag_pPag20078 srlQ1; Predicted sugar phosphate isomerase K02467 gutQ; arabinose 5-phosphate isomerase [EC:5.3.1.13] D Pvag_pPag20097 srlQ3; Predicted sugar phosphate isomerase K02467 gutQ; arabinose 5-phosphate isomerase [EC:5.3.1.13] D Pvag_1939 ygbM; putative endonuclease K22131 otnI; 2-dehydrotetronate isomerase [EC:5.3.1.35] D Pvag_2759 mpl; UDP-N-acetylmuramate-alanine ligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45] D Pvag_1237 rnfD; electron transport complex protein rnfD K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2] D Pvag_1238 rnfC; Electron transport complex protein rnfC K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2] D Pvag_1239 rnfB; Electron transport complex protein rnfB K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2] D Pvag_3017 zntA; heavy metal-transporting ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21] D Pvag_2345 mgtB; magnesium-translocating P-type ATPase K01531 mgtA; P-type Mg2+ transporter [EC:7.2.2.14] C 99981 Carbohydrate metabolism D Pvag_0184 sfsA; Sugar fermentation stimulation protein A K06206 sfsA; sugar fermentation stimulation protein A D Pvag_3593 iolH; Protein iolH K06605 iolH; myo-inositol catabolism protein IolH C 99982 Energy metabolism D Pvag_3328 fdhD; Protein fdhD K02379 fdhD; FdhD protein D Pvag_2089 yfae3; Ferredoxin-1 K11107 yfaE; ferredoxin D Pvag_1236 rfnG; Electron transport complex protein rnfG K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G D Pvag_1235 rnfE; Electron transport complex protein rnfE K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E D Pvag_1240 rnfA; Electron transport complex protein rnfA K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A D Pvag_3253 mioC; Sulfite reductase K06205 mioC; MioC protein D Pvag_2519 fldB; Flavodoxin K03840 fldB; flavodoxin II D Pvag_2755 cybC; Probable soluble cytochrome 1 precursor K15536 cybC; soluble cytochrome b562 D Pvag_0525 fldA; Flavodoxin K03839 fldA; flavodoxin I C 99983 Lipid metabolism D Pvag_2783 aidB; Putative acyl-Coenzyme A dehydrogenase K09456 aidB; putative acyl-CoA dehydrogenase C 99984 Nucleotide metabolism D Pvag_2358 nrdI; Protein nrdI K03647 nrdI; protein involved in ribonucleotide reduction C 99985 Amino acid metabolism D Pvag_2200 cysZ; Protein cysZ K06203 cysZ; CysZ protein D Pvag_0220 yaeR; Uncharacterized protein ywkD K08234 yaeR; glyoxylase I family protein D Pvag_1448 ycjI; Uncharacterized protein ycjI K14054 mpaA; murein peptide amidase A D Pvag_2565 yggS; UPF0001 protein yggS K06997 yggS; PLP dependent protein C 99986 Glycan metabolism D Pvag_1981 wceL; Extracellular polysaccharide biosynthesis protein wceL K16708 amsC; amylovoran biosynthesis protein AmsC D Pvag_1977 wceF; Extracellular polysaccharide biosynthesis protein wceF precursor K16709 amsF; amylovoran biosynthesis protein AmsF D Pvag_1489 yciS; Inner membrane protein yciS K08992 lapA; lipopolysaccharide assembly protein A D Pvag_1488 yciM; Uncharacterized protein yciM precursor K19804 lapB; lipopolysaccharide assembly protein B D Pvag_0605 ybhN; Probable lysylphosphatidylglycerol synthetase K07027 K07027; glycosyltransferase 2 family protein D Pvag_1758 losA; Lacto-N-neotetraose biosynthesis glycosyltransferase lgtB K07270 K07270; glycosyl transferase, family 25 D Pvag_3355 yhjn1; Cellulose synthase 1 K20541 bcsB; cellulose synthase operon protein B D Pvag_3365 yhjn3; Cyclic di-GMP-binding protein precursor K20541 bcsB; cellulose synthase operon protein B C 99987 Cofactor metabolism D Pvag_3398 hemY; Protein hemY K02498 hemY; HemY protein D Pvag_3432 aarF; Probable ubiquinone biosynthesis protein ubiB K03688 ubiB; ubiquinone biosynthesis protein D Pvag_3431 yigP; Uncharacterized protein yigP K03690 ubiJ; ubiquinone biosynthesis accessory factor UbiJ D Pvag_2656 yqiC; hypothetical protein K09806 ubiK; ubiquinone biosynthesis accessory factor UbiK D Pvag_3563 ydaH; Putative aminobenzoyl-glutamate transport protein K12942 abgT; aminobenzoyl-glutamate transport protein C 99988 Secondary metabolism D Pvag_2638 sufI; Blue copper oxidase cueO precursor K04753 sufI; suppressor of ftsI C 99999 Others D Pvag_2735 yqjF; Inner membrane protein yqjF K15977 K15977; putative oxidoreductase D Pvag_pPag30258 doxX; DoxX K15977 K15977; putative oxidoreductase D Pvag_2231 ypfh1; Acyl-protein thioesterase 1 K06999 K06999; phospholipase/carboxylesterase D Pvag_3079 ypfh3; Acyl-protein thioesterase 1 K06999 K06999; phospholipase/carboxylesterase B B 09192 Unclassified: genetic information processing C 99973 Transcription D Pvag_pPag20076 srlM1; Sorbitol operon activator protein K02466 gutM; glucitol operon activator protein D Pvag_pPag20099 srlM3; Sorbitol/Glucitol operon activator protein K02466 gutM; glucitol operon activator protein D Pvag_1268 Uncharacterized protein yhcO K03623 yhcO; ribonuclease inhibitor D Pvag_2811 yhcO; Uncharacterized protein yhcO K03623 yhcO; ribonuclease inhibitor D Pvag_0290 cspI; Cold shock-like protein cspG (CPS-G) K03704 cspA; cold shock protein D Pvag_0476 cspE; Cold shock-like protein cspE (CSP-E) K03704 cspA; cold shock protein D Pvag_0715 cspD; Cold shock-like protein cspD K03704 cspA; cold shock protein D Pvag_1597 cspC; Cold shock-like protein cspC K03704 cspA; cold shock protein D Pvag_3089 cspA; Cold shock-like protein cspA K03704 cspA; cold shock protein D Pvag_pPag30249 cspI; Cold shock-like protein cspI K03704 cspA; cold shock protein D Pvag_3474 rsd; anti-RNA polymerase sigma 70 factor K07740 rsd; regulator of sigma D D Pvag_0391 glnK; Nitrogen regulatory protein P-II K04752 glnK; nitrogen regulatory protein P-II 2 D Pvag_2955 tex; putative RNA binding protein K06959 tex; protein Tex C 99974 Translation C 99975 Protein processing D Pvag_0716 clpS; ATP-dependent Clp protease adaptor protein K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS D Pvag_0376 tig; Trigger factor (TF) K03545 tig; trigger factor D Pvag_2828 yedZ; Putative UPF0191 membrane protein yedZ K17247 msrQ; methionine sulfoxide reductase heme-binding subunit D Pvag_3324 fdhE; formate dehydrogenase accessory protein FdhE K02380 fdhE; FdhE protein D Pvag_2334 smpB; SsrA-binding protein (Small protein B) K03664 smpB; SsrA-binding protein D Pvag_2357 nrdH; Glutaredoxin-like protein nrdH K06191 nrdH; glutaredoxin-like protein NrdH D Pvag_3112 yifB; Competence protein comM K07391 comM; magnesium chelatase family protein D Pvag_2341 Proteasome alpha-1 subunit K07395 K07395; putative proteasome-type protease D Pvag_2919 yhfA; Protein yhfA K07397 yhfA; putative redox protein D Pvag_2960 yhgI; Protein gntY K07400 nfuA; Fe/S biogenesis protein NfuA D Pvag_2585 selenoprotein W-related protein K07401 K07401; selenoprotein W-related protein D Pvag_1369 xdhC; Uncharacterized protein yqeB K07402 xdhC; xanthine dehydrogenase accessory factor D Pvag_pPag30474 Probable xanthine dehydrogenase subunit A K07402 xdhC; xanthine dehydrogenase accessory factor C 99976 Replication and repair D Pvag_0395 mgmT; Methylated-DNA--protein-cysteinemethyltransferase K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein D Pvag_2477 exo; 5'-3' exonuclease K01146 xni; protein Xni D Pvag_3196 radC; DNA repair protein radC K03630 radC; DNA repair protein RadC D Pvag_3429 yigN; DNA recombination protein rmuC K09760 rmuC; DNA recombination protein RmuC D Pvag_0714 ybjD; Uncharacterized protein ybjD K07459 ybjD; putative ATP-dependent endonuclease of the OLD family D Pvag_2739 yraN; UPF0102 protein yraN K07460 yraN; putative endonuclease D Pvag_3693 yhbQ; UPF0213 protein K07461 K07461; putative endonuclease D Pvag_2854 smf; Protein smf K04096 smf; DNA processing protein D Pvag_0957 PBSX phage terminase large subunit K06909 xtmB; phage terminase large subunit D Pvag_0727 ycaJ; Uncharacterized protein K07478 ycaJ; putative ATPase D Pvag_2852 yrdD; Uncharacterized protein yrdD K07479 yrdD; putative DNA topoisomerase D Pvag_pPag20031 hypothetical protein K07483 K07483; transposase D Pvag_pPag20145 Uncharacterized protein y4rG K07483 K07483; transposase D Pvag_pPag20143 Uncharacterized protein y4hP K07484 K07484; transposase D Pvag_pPag20144 Uncharacterized protein y4jC K07484 K07484; transposase D Pvag_pPag20181 piv3; Putative transposase K07486 K07486; transposase D Pvag_3534 Insertion element IS2A uncharacterized 48.2 kDa protein K07497 K07497; putative transposase D Pvag_pPag20030 Putative transposase for insertion sequence element IS986/IS6110 K07497 K07497; putative transposase D Pvag_pPag20086 orfB; Putative transposase insK for insertion sequence element IS150 K07497 K07497; putative transposase D Pvag_pPag20087 Low calcium response locus protein S K07497 K07497; putative transposase D Pvag_pPag20210 orfA; Insertion element IS407 uncharacterized 10.0 kDa protein K07497 K07497; putative transposase C 99979 Viral proteins C 99998 Others D Pvag_1460 pspA; Laminin subunit beta-1 precursor K03969 pspA; phage shock protein A D Pvag_1457 Phage shock protein D K03971 pspD; phage shock protein D D Pvag_0412 ybaB; UPF0133 protein ybaB K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D Pvag_2162 yfdC; Putative FNT family transport protein yfdC K21990 yfdC; formate-nitrite transporter family protein D Pvag_0144 yicJ; putative GPH family permease yicJ K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family D Pvag_pPag10123 citM; Citrate transporter K03300 TC.CITMHS; citrate-Mg2+:H+ or citrate-Ca2+:H+ symporter, CitMHS family D Pvag_1229 ydgR; Putative proton-dependent di-/tripeptide transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family D Pvag_0612 Putative low-affinity inorganic phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family D Pvag_0158 probable solute/sodium symporter 1 K03307 TC.SSS; solute:Na+ symporter, SSS family D Pvag_0340 brnQ; Branched-chain amino acid transport system II carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family D Pvag_3501 ybaS; Putative sodium-dependent transporter K03453 TC.BASS; bile acid:Na+ symporter, BASS family D Pvag_0245 putative NCS1 family permease K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family D Pvag_1325 Putative purine-cytosine permease K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family D Pvag_3202 nupc3; Sodium/nucleoside cotransporter 1 K03317 TC.CNT; concentrative nucleoside transporter, CNT family D Pvag_0689 ybjL; Putative AAE family transporter ybjL K07085 K07085; putative transport protein D Pvag_0004 yohN; Uncharacterized protein yohN precursor K23243 rcnB; nickel/cobalt homeostasis protein C 99978 Cell growth D Pvag_1514 ispZ; Probable intracellular septation protein K06190 ispZ; intracellular septation protein D Pvag_3020 dcrB; Protein dcrB precursor K27311 dcrB; inner membrane lipoprotein DcrB D Pvag_pPag30108 hypothetical protein K27311 dcrB; inner membrane lipoprotein DcrB D Pvag_1564 Uncharacterized protein ycgB K06415 spoVR; stage V sporulation protein R D Pvag_3175 yibP; Uncharacterized protein yibP K22719 envC; murein hydrolase activator C 99993 Cell motility D Pvag_0907 ycfM; Uncharacterized protein ycfM K07337 K07337; penicillin-binding protein activator D Pvag_0781 yccR; Uncharacterized protein yccR K07343 tfoX; DNA transformation protein and related proteins D Pvag_1343 stbB; Chaperone protein fimC precursor K15540 ecpD; chaperone protein EcpD D Pvag_pPag10090 ecpD; Chaperone protein fimB/fhaD precursor K15540 ecpD; chaperone protein EcpD D Pvag_2474 syd; syd protein K15723 syd; SecY interacting protein Syd C 99995 Signaling proteins D Pvag_0142 ampE; Protein ampE K03807 ampE; AmpE protein D Pvag_pPag20023 terA; Tellurium resistance protein terA K05792 terA; tellurite resistance protein TerA D Pvag_pPag20019 terE; Tellurium resistance protein terE K05795 terD; tellurium resistance protein TerD D Pvag_pPag20020 terD; Tellurium resistance protein TerD K05795 terD; tellurium resistance protein TerD D Pvag_pPag20024 terZ; Tellurium resistance protein terZ K05791 terZ; tellurium resistance protein TerZ D Pvag_1605 proQ; ProP effector K03607 proQ; ProP effector D Pvag_3052 uspa3; Universal stress protein A K06149 uspA; universal stress protein A D Pvag_1421 ydaA; Universal stress protein E K14055 uspE; universal stress protein E D Pvag_3222 typA; GTP-binding protein TypA K06207 typA; GTP-binding protein D Pvag_1233 CBS domain-containing membrane protein K07168 K07168; CBS domain-containing membrane protein D Pvag_1035 Putative type VI secretion system, core protein K07169 K07169; FHA domain-containing protein D Pvag_1086 Putative type VI secretion system, core protein K07169 K07169; FHA domain-containing protein D Pvag_0506 ybeZ; PhoH-like protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins D Pvag_1741 phoH; Protein phoH K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins D Pvag_1556 yeaG; serine protein kinase K07180 prkA; serine protein kinase D Pvag_2660 ygiM; Uncharacterized protein ygiM precursor K07184 ygiM; SH3 domain protein D Pvag_0035 smp; Protein smp precursor K07186 smp; membrane protein D Pvag_0365 yajQ; UPF0234 protein K09767 yajQ; cyclic-di-GMP-binding protein D Pvag_1190 ycgF; Uncharacterized protein ycgF K21973 bluF; blue light- and temperature-responsive anti-repressor D Pvag_pPag10001 ycgF1; Uncharacterized protein ycgF K21973 bluF; blue light- and temperature-responsive anti-repressor D Pvag_pPag10010 ycgF3; Uncharacterized protein ycgF K21973 bluF; blue light- and temperature-responsive anti-repressor D Pvag_1217 ycgz1; Uncharacterized protein ycgZ K21974 ycgZ; probable RcsB/C two-component-system connector D Pvag_1519 ycgz3; Uncharacterized protein ycgZ K21974 ycgZ; probable RcsB/C two-component-system connector D Pvag_pPag20141 ycgZ; Uncharacterized protein ycgZ K21974 ycgZ; probable RcsB/C two-component-system connector D Pvag_pPag30488 ycgZ; Uncharacterized protein ycgZ K21974 ycgZ; probable RcsB/C two-component-system connector D Pvag_pPag20140 hypothetical protein K21975 ymgA; probable RcsB/C two-component-system connector D Pvag_pPag30489 hypothetical protein K21975 ymgA; probable RcsB/C two-component-system connector D Pvag_1210 Uncharacterized protein ymgB K21976 ariR; probable RcsB/C two-component-system connector, global regulator of biofilm formation and acid-resistance D Pvag_pPag20139 Uncharacterized protein ymgB K21976 ariR; probable RcsB/C two-component-system connector, global regulator of biofilm formation and acid-resistance D Pvag_pPag30490 ymgB; Uncharacterized protein ymgB K21976 ariR; probable RcsB/C two-component-system connector, global regulator of biofilm formation and acid-resistance D Pvag_0315 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K22747 AIFM3; apoptosis-inducing factor 3 C 99992 Structural proteins D Pvag_0726 lola1; Outer-membrane lipoprotein carrier protein precursor K03634 lolA; outer membrane lipoprotein carrier protein D Pvag_1072 hemM; Outer-membrane lipoprotein hemM precursor K02494 lolB; outer membrane lipoprotein LolB D Pvag_2152 vacJ; Lipoprotein vacJ precursor K04754 mlaA; phospholipid-binding lipoprotein MlaA D Pvag_3384 wzz; Lipopolysaccharide biosynthesis protein wzz K05790 wzzE; lipopolysaccharide biosynthesis protein WzzE D Pvag_1187 slyB; Outer membrane lipoprotein slyB precursor K06077 slyB; outer membrane lipoprotein SlyB D Pvag_0211 ompH; Outer membrane protein precursor K06142 hlpA; outer membrane protein D Pvag_2437 nlpD; Lipoprotein nlpD precursor K06194 nlpD; lipoprotein NlpD D Pvag_3684 nlpI; Lipoprotein nlpI precursor K05803 nlpI; lipoprotein NlpI D Pvag_1511 yciD; Outer membrane protein W precursor K07275 ompW; outer membrane protein D Pvag_1134 ydiY; Uncharacterized protein ydiY precursor K07283 ydiY; putative salt-induced outer membrane protein D Pvag_1576 slp; Uncharacterized lipoprotein yeaY precursor K07285 slp; outer membrane lipoprotein D Pvag_0373 yajG; Uncharacterized lipoprotein yajG precursor K07286 yajG; uncharacterized lipoprotein D Pvag_1987 asmA; Protein asmA precursor K07289 asmA; AsmA protein D Pvag_3375 yhjG; Uncharacterized protein yhjG K07290 yhjG; AsmA family protein D Pvag_0427 ybbJ; Inner membrane protein ybbJ K07340 ybbJ; inner membrane protein D Pvag_pPag30015 ydgG; UPF0118 inner membrane protein yhhT K11744 tqsA; AI-2 transport protein TqsA D Pvag_1485 hypothetical protein K04062 osmB; osmotically inducible lipoprotein OsmB D Pvag_1124 osmE; Osmotically-inducible lipoprotein E precursor K04064 osmE; osmotically inducible lipoprotein OsmE D Pvag_2157 ccmE; Cytochrome c-type biogenesis protein CcmE K02197 ccmE; cytochrome c-type biogenesis protein CcmE D Pvag_2154 ccmH; Cytochrome c-type biogenesis protein ccmH precursor K02200 ccmH; cytochrome c-type biogenesis protein CcmH D Pvag_2280 yfgA; Uncharacterized protein K15539 rodZ; cytoskeleton protein RodZ D Pvag_2816 yhcR; hypothetical protein K21695 aaeX; protein AaeX C 99994 Others D Pvag_3271 phoU; Phosphate transport system protein phoU K02039 phoU; phosphate transport system protein D Pvag_2893 niiA; Nitrite reductase [NAD(P)H] K02192 bfd; bacterioferritin-associated ferredoxin D Pvag_0853 mdoG; Glucans biosynthesis protein G precursor K03670 mdoG; periplasmic glucans biosynthesis protein D Pvag_pPag20022 terB; Tellurium resistance protein terB K05793 terB; tellurite resistance protein TerB D Pvag_pPag20021 terC; Tellurium resistance protein terC K05794 terC; tellurite resistance protein TerC D Pvag_3606 cutA; Divalent-cation tolerance protein cutA K03926 cutA; periplasmic divalent cation tolerance protein D Pvag_1709 cutC; Copper homeostasis protein cutC K06201 cutC; copper homeostasis protein D Pvag_1847 phnK; Phosphonates transport ATP-binding protein phnK K05781 phnK; putative phosphonate transport system ATP-binding protein D Pvag_0090 apaG; Protein apaG K06195 apaG; ApaG protein D Pvag_2583 hmuS; Hemin transport protein hmuS K07225 hmuS; putative hemin transport protein B B 09194 Poorly characterized C 99996 General function prediction only D Pvag_2124 cvpA; Colicin V production protein K03558 cvpA; membrane protein required for colicin V production D Pvag_0870 mviM; Virulence factor mviM K03810 mviM; virulence factor D Pvag_2093 elaA; UPF0039 protein K02348 elaA; ElaA protein D Pvag_1081 chaB; Cation transport regulator chaB K06197 chaB; cation transport regulator D Pvag_2608 osmY; Uncharacterized protein precursor K04065 osmY; hyperosmotically inducible periplasmic protein D Pvag_1014 ycdX; Putative hydrolase K04477 ycdX; putative hydrolase D Pvag_1282 hypothetical protein K06135 pqqA; pyrroloquinoline quinone biosynthesis protein A D Pvag_1283 pqqB; Coenzyme PQQ synthesis protein B K06136 pqqB; pyrroloquinoline quinone biosynthesis protein B D Pvag_1285 pqqD; Coenzyme PQQ synthesis protein D K06138 pqqD; pyrroloquinoline quinone biosynthesis protein D D Pvag_2326 yfiD; Autonomous glycyl radical cofactor K06866 grcA; autonomous glycyl radical cofactor D Pvag_1539 ychK; Lysophospholipase nte1 K07001 K07001; NTE family protein D Pvag_0192 yadR; hypothetical protein K15724 erpA; iron-sulfur cluster insertion protein D Pvag_1154 sufA; Iron-sulfur cluster biosynthesis protein sufA K05997 sufA; Fe-S cluster assembly protein SufA D Pvag_1155 sufB; Iron-sulfur cluster biosynthesis protein sufB K09014 sufB; Fe-S cluster assembly protein SufB D Pvag_1157 sufD; Iron-sulfur cluster biosynthesis protein sufD K09015 sufD; Fe-S cluster assembly protein SufD D Pvag_0807 hypothetical protein K07038 K07038; inner membrane protein D Pvag_1127 ydjM; Inner membrane protein ydjM precursor K07038 K07038; inner membrane protein D Pvag_3727 pter; Phosphotriesterase-related protein K07048 PTER; phosphotriesterase-related protein D Pvag_3103 yhjD; Uncharacterized 36.0 kDa protein in kdgK 5'region K07058 K07058; membrane protein D Pvag_3220 rbn; tRNA processing exoribonuclease BN K07058 K07058; membrane protein D Pvag_3609 fxsA; Protein fxsA K07113 fxsA; UPF0716 protein FxsA D Pvag_1159 sufE; Cysteine desulfuration protein sufE K02426 sufE; cysteine desulfuration protein SufE D Pvag_2483 sufE2; Cysteine desulfuration protein sufE K02426 sufE; cysteine desulfuration protein SufE D Pvag_0858 yceA; UPF0176 protein K07146 K07146; UPF0176 protein D Pvag_0936 ycfC; UPF0274 protein ycfC K07153 hflD; high frequency lysogenization protein D Pvag_3567 phnB; Protein phnB K04750 phnB; PhnB protein D Pvag_0856 msyB; Acidic protein msyB K12147 msyB; acidic protein MsyB D Pvag_0025 fhuF; Ferric iron reductase protein fhuF K13255 fhuF; ferric iron reductase protein FhuF D Pvag_1231 ygcy1; probable glucarate dehydratase 2 K13918 gudX; glucarate dehydratase-related protein D Pvag_2468 ygcy3; putative glucarate dehydratase K13918 gudX; glucarate dehydratase-related protein D Pvag_2904 slyX; Protein slyX K03745 slyX; SlyX protein D Pvag_2853 smg; Protein smg K03747 smg; Smg protein D Pvag_0059 creA; Protein creA K05805 creA; CreA protein D Pvag_2558 sprT; Protein sprT K02742 sprT; SprT protein D Pvag_2936 conserved hypothetical protein K03112 damX; DamX protein D Pvag_2022 sanA; Protein sanA K03748 sanA; SanA protein D Pvag_2127 dedA; Protein dedA (Protein DSG-1) K03975 dedA; membrane-associated protein D Pvag_2091 elaB; Uncharacterized protein ygaM K05594 elaB; ElaB protein D Pvag_1455 ycjF; UPF0283 protein ycjF K08990 ycjF; putative membrane protein D Pvag_3014 yhhL; Uncharacterized protein yhhL K08993 yhhL; putative membrane protein D Pvag_0394 ybaY; Uncharacterized lipoprotein ybaY precursor K09914 K09914; putative lipoprotein D Pvag_pPag30211 malM; Maltose operon periplasmic protein precursor K05775 malM; maltose operon periplasmic protein D Pvag_3509 yjbA; Protein psiE K13256 psiE; protein PsiE D Pvag_0323 aroM; Protein aroM K14591 aroM; protein AroM D Pvag_2408 phnA; Protein phnA K06193 phnA; protein PhnA C 99997 Function unknown D Pvag_0799 Uncharacterized protein ymdF K06884 K06884; uncharacterized protein D Pvag_1467 yciG; hypothetical protein K06884 K06884; uncharacterized protein D Pvag_3165 hypothetical protein K06884 K06884; uncharacterized protein D Pvag_pPag30066 hypothetical protein K06884 K06884; uncharacterized protein D Pvag_2780 yjfP; Uncharacterized protein yfhR K06889 K06889; uncharacterized protein D Pvag_pPag30371 Uncharacterized protein ycjY K06889 K06889; uncharacterized protein D Pvag_0604 ybhL; Uncharacterized protein K06890 K06890; uncharacterized protein D Pvag_1634 w1; Baseplate assembly protein W (GpW) K06903 W; Bacteriophage baseplate protein W D Pvag_2688 w3; Baseplate assembly protein W (GpW) K06903 W; Bacteriophage baseplate protein W D Pvag_2673 d1; Late control gene D protein (GpD) K06905 D; Bacteriophage probable baseplate hub protein D Pvag_2675 putative phage tail protein K06906 gpU; phage tail protein D Pvag_1641 fi1; Major tail sheath protein (Protein FI) K06907 FI; Bacteriophage tail sheath protein D Pvag_2681 fi3; Major tail sheath protein (Protein FI) K06907 FI; Bacteriophage tail sheath protein D Pvag_1642 fii1; Major tail tube protein (Protein FII) K06908 FII; Bacteriophage tail tube protein D Pvag_2680 fii3; Major tail tube protein (Protein FII) K06908 FII; Bacteriophage tail tube protein D Pvag_1456 ycjX; hypothetical protein K06918 K06918; uncharacterized protein D Pvag_0787 yccU; Uncharacterized protein yccU K06929 K06929; uncharacterized protein D Pvag_1179 ydhL; Uncharacterized protein ydhL precursor K06938 K06938; uncharacterized protein D Pvag_1512 ykgJ; Uncharacterized protein ykgJ K06940 K06940; uncharacterized protein D Pvag_1813 yedJ; Uncharacterized protein yedJ K06950 K06950; uncharacterized protein D Pvag_1126 ydjN; hypothetical symporter protein K06956 K06956; uncharacterized protein D Pvag_3733 Uncharacterized protein K06971 K06971; uncharacterized protein D Pvag_1961 aotO; hypothetical protein K06987 K06987; uncharacterized protein D Pvag_0910 ycfP; UPF0227 protein ycfP K07000 K07000; uncharacterized protein D Pvag_2646 yqiA; Esterase yqiA K07000 K07000; uncharacterized protein D Pvag_pPag30514 hypothetical protein K07006 K07006; uncharacterized protein D Pvag_2063 yejM; Inner membrane protein yejM K07014 K07014; uncharacterized protein D Pvag_2916 yheT; Abhydrolase domain-containing protein 1 K07019 K07019; uncharacterized protein D Pvag_0001 yecA; Uncharacterized protein yecA K07039 K07039; uncharacterized protein D Pvag_2233 ypfJ; Uncharacterized protein ypfJ K07054 K07054; uncharacterized protein D Pvag_2906 yheV; Uncharacterized protein yheV K07070 K07070; uncharacterized protein D Pvag_2117 yfcH; UPF0105 protein K07071 K07071; uncharacterized protein D Pvag_2141 yfcA; Inner membrane protein yfcA K07090 K07090; uncharacterized protein D Pvag_0088 hypothetical protein K07093 K07093; uncharacterized protein D Pvag_pPag10016 Uncharacterized metallophosphoesterase K07098 K07098; uncharacterized protein D Pvag_2770 ytfJ; Uncharacterized protein ytfJ precursor K07109 K07109; uncharacterized protein D Pvag_pPag30176 ytfJ; Uncharacterized protein ytfJ precursor K07109 K07109; uncharacterized protein D Pvag_3410 abrB; Protein abrB (AidB regulator) K07120 K07120; uncharacterized protein D Pvag_2738 yraM; Uncharacterized protein yraM K07121 K07121; uncharacterized protein D Pvag_2671 putative short-chain dehydrogenase K07124 K07124; uncharacterized protein D Pvag_1674 yecN; Inner membrane protein yecN K07136 K07136; uncharacterized protein D Pvag_0769 ycbX; Uncharacterized protein ycbX K07140 K07140; MOSC domain-containing protein D Pvag_2028 yeiB; Uncharacterized protein yeiB K07148 K07148; uncharacterized protein D Pvag_3312 yidD; UPF0161 protein K08998 K08998; uncharacterized protein D Pvag_0486 ybeD; UPF0250 protein K09158 K09158; uncharacterized protein D Pvag_1568 ycgN; UPF0260 protein ycgN K09160 K09160; uncharacterized protein D Pvag_2111 yfbU; UPF0304 protein yfbU K09161 K09161; uncharacterized protein D Pvag_0449 Uncharacterized protein K09702 K09702; uncharacterized protein D Pvag_0317 yaiI; UPF0178 protein K09768 K09768; uncharacterized protein D Pvag_1517 yciI; Protein yciI K09780 K09780; uncharacterized protein D Pvag_1808 yedI; Inner membrane protein yedI K09781 K09781; uncharacterized protein D Pvag_1557 yeaH; UPF0229 protein K09786 K09786; uncharacterized protein D Pvag_0409 ybaN; Inner membrane protein ybaN K09790 K09790; uncharacterized protein D Pvag_0743 ycaR; Tetraacyldisaccharide 4'-kinase K09791 K09791; uncharacterized protein D Pvag_3176 yigQ; Uncharacterized protein yibQ precursor K09798 K09798; uncharacterized protein D Pvag_2332 yfjF; UPF0125 protein K09801 K09801; uncharacterized protein D Pvag_1934 yeeX; UPF0265 protein yeeX K09802 K09802; uncharacterized protein D Pvag_2541 yggE; Uncharacterized protein yggE K09807 K09807; uncharacterized protein D Pvag_3333 ybjX; Uncharacterized protein ybjX K09824 virK; uncharacterized protein D Pvag_0065 yaaA; UPF0246 protein K09861 K09861; uncharacterized protein D Pvag_0133 yacG; UPF0243 zinc-binding protein K09862 K09862; uncharacterized protein D Pvag_3478 yjaG; Uncharacterized protein yjaG K09891 K09891; uncharacterized protein D Pvag_3227 yihI; UPF0241 protein in hemN 3'region (orf2) K09894 K09894; uncharacterized protein D Pvag_2533 ygfB; UPF0149 protein ygfB K09895 K09895; uncharacterized protein D Pvag_3232 yihD; Protein yihD K09896 K09896; uncharacterized protein D Pvag_3113 yifE; UPF0438 protein yifE K09897 K09897; uncharacterized protein D Pvag_2917 yheU; UPF0270 protein yheU K09898 K09898; uncharacterized protein D Pvag_2112 yfbV; UPF0208 membrane protein K09899 K09899; uncharacterized protein D Pvag_1523 yciU; UPF0263 protein K09901 K09901; uncharacterized protein D Pvag_1570 ycgL; Uncharacterized protein ycgL K09902 K09902; uncharacterized protein D Pvag_2062 yejL; UPF0352 protein K09904 K09904; uncharacterized protein D Pvag_1711 yecM; Protein yecM K09907 K09907; uncharacterized protein D Pvag_3620 yhcB; Putative cytochrome d ubiquinol oxidase subunit III K09908 K09908; uncharacterized protein D Pvag_0786 yccT; UPF0319 protein yccT precursor K09909 K09909; uncharacterized protein D Pvag_0155 yacL; UPF0231 protein K09910 K09910; uncharacterized protein D Pvag_0778 ycbG; UPF0268 protein ycbG K09911 K09911; uncharacterized protein D Pvag_1913 yaiL; Uncharacterized protein yaiL K09912 K09912; uncharacterized protein D Pvag_0869 yceH; Uncharacterized protein yceH (G20.3) K09915 K09915; uncharacterized protein D Pvag_1550 yeaC; Uncharacterized protein in dagA 3'region K09916 K09916; uncharacterized protein D Pvag_1584 yoaH; UPF0181 protein K09917 K09917; uncharacterized protein D Pvag_pPag30323 yebG; Uncharacterized protein yebG K09918 K09918; uncharacterized protein D Pvag_3076 hypothetical protein K09919 K09919; uncharacterized protein D Pvag_2648 yqiB; Uncharacterized protein yqiB K09920 K09920; uncharacterized protein D Pvag_3405 yigA; Uncharacterized protein yigA K09921 K09921; uncharacterized protein D Pvag_2570 yggL; Uncharacterized protein yggL K09923 K09923; uncharacterized protein D Pvag_0742 ycaQ; Uncharacterized protein ycaQ K09927 K09927; uncharacterized protein D Pvag_2788 yjeT; Uncharacterized protein yjeT K09937 K09937; uncharacterized protein D Pvag_0318 yba2; Uncharacterized protein (yba2) K09945 K09945; uncharacterized protein D Pvag_2197 ypeB; Uncharacterized protein ypeB K09954 K09954; uncharacterized protein D Pvag_pPag30304 hypothetical protein K09958 K09958; uncharacterized protein D Pvag_0958 hypothetical protein K09961 K09961; uncharacterized protein D Pvag_0424 ybaP; Uncharacterized protein ybaP K09973 K09973; uncharacterized protein D Pvag_0647 ydjR; Uncharacterized protein ydjR K09975 K09975; uncharacterized protein D Pvag_1435 ydbL; Uncharacterized protein ydbL precursor K09978 K09978; uncharacterized protein D Pvag_3694 yhbP; UPF0306 protein K09979 K09979; uncharacterized protein D Pvag_1611 Uncharacterized protein K09984 K09984; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: August 10, 2026