+D GENES KO #

  KEGG Orthology (KO) - Prevotella veroralis

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A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:pvf00010] D J5A55_04350 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D J5A55_01710 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D J5A55_09470 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D J5A55_03865 diphosphate--fructose-6-phosphate 1-phosphotransferase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90] D J5A55_10720 fructose-bisphosphatase class III K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11] D J5A55_06570 class II fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D J5A55_04615 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D J5A55_09730 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D J5A55_05685 histidine phosphatase family protein K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D J5A55_07435 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D J5A55_11000 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D J5A55_05565 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D J5A55_04920 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D J5A55_11105 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D J5A55_04955 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D J5A55_00125 2-oxoacid:acceptor oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D J5A55_02545 3-methyl-2-oxobutanoate dehydrogenase subunit VorB K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D J5A55_00130 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D J5A55_02550 2-oxoglutarate oxidoreductase K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D J5A55_02490 aldose epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D J5A55_05535 galactose mutarotase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D J5A55_10695 histidine-type phosphatase K01085 agp; glucose-1-phosphatase [EC:3.1.3.10] D J5A55_03750 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D J5A55_00175 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] C 00020 Citrate cycle (TCA cycle) [PATH:pvf00020] D J5A55_11105 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D J5A55_00125 2-oxoacid:acceptor oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D J5A55_02545 3-methyl-2-oxobutanoate dehydrogenase subunit VorB K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D J5A55_00130 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D J5A55_02550 2-oxoglutarate oxidoreductase K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D J5A55_02555 2-oxoacid:acceptor oxidoreductase family protein K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3] D J5A55_02540 4Fe-4S binding protein K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3] D J5A55_02915 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D J5A55_02920 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D J5A55_07865 fumarate reductase/succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D J5A55_07870 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D J5A55_07860 succinate dehydrogenase/fumarate reductase cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D J5A55_05270 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D J5A55_06995 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D J5A55_01995 biotin/lipoyl-binding protein K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1] D J5A55_00175 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D J5A55_04955 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] C 00030 Pentose phosphate pathway [PATH:pvf00030] D J5A55_01710 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D J5A55_07685 lactonase family protein K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31] D J5A55_04395 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D J5A55_05555 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D J5A55_05560 RpiB/LacA/LacB family sugar-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D J5A55_08160 deoC; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4] D J5A55_03750 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D J5A55_11810 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D J5A55_06570 class II fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D J5A55_10720 fructose-bisphosphatase class III K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11] D J5A55_09470 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D J5A55_03865 diphosphate--fructose-6-phosphate 1-phosphotransferase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90] C 00040 Pentose and glucuronate interconversions [PATH:pvf00040] D J5A55_02270 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D J5A55_04395 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] C 00051 Fructose and mannose metabolism [PATH:pvf00051] D J5A55_08310 beta-mannosidase K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78] D J5A55_08610 beta-mannosidase K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78] D J5A55_06265 cellulase family glycosylhydrolase K19355 MAN; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78] D J5A55_08600 cellulase family glycosylhydrolase K19355 MAN; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78] D J5A55_07725 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D J5A55_07910 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D J5A55_06260 class I mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D J5A55_02300 glmM; phosphoglucosamine mutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D J5A55_00440 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D J5A55_11995 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D J5A55_11625 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47] D J5A55_11620 GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271] D J5A55_09470 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D J5A55_03865 diphosphate--fructose-6-phosphate 1-phosphotransferase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90] D J5A55_10720 fructose-bisphosphatase class III K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11] D J5A55_06570 class II fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D J5A55_07715 DUF4980 domain-containing protein K03332 fruA; fructan beta-fructosidase [EC:3.2.1.80] D J5A55_05560 RpiB/LacA/LacB family sugar-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] C 00052 Galactose metabolism [PATH:pvf00052] D J5A55_02490 aldose epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D J5A55_05535 galactose mutarotase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D J5A55_05545 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D J5A55_03385 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D J5A55_03750 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D J5A55_04350 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D J5A55_01615 DUF4981 domain-containing protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D J5A55_05340 DUF4981 domain-containing protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D J5A55_09105 beta-galactosidase K12308 bgaB; beta-galactosidase [EC:3.2.1.23] D J5A55_04750 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D J5A55_00645 glycoside hydrolase family 27 protein K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] D J5A55_08590 glycoside hydrolase family 27 protein K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] D J5A55_09470 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D J5A55_07710 DUF4975 domain-containing protein K01193 INV; beta-fructofuranosidase [EC:3.2.1.26] C 00053 Ascorbate and aldarate metabolism D J5A55_02270 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] C 00500 Starch and sucrose metabolism [PATH:pvf00500] D J5A55_07710 DUF4975 domain-containing protein K01193 INV; beta-fructofuranosidase [EC:3.2.1.26] D J5A55_08605 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D J5A55_03795 glycogen/starch synthase K00703 glgA; starch synthase [EC:2.4.1.21] D J5A55_04595 glycosyltransferase family 4 protein K16150 K16150; glycogen synthase [EC:2.4.1.11] D J5A55_04190 alpha amylase C-terminal domain-containing protein K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D J5A55_00305 glgP; alpha-glucan family phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D J5A55_07565 pulA; type I pullulanase K01200 pulA; pullulanase [EC:3.2.1.41] D J5A55_07525 chitobiase/beta-hexosaminidase C-terminal domain-containing protein K01176 AMY; alpha-amylase [EC:3.2.1.1] D J5A55_04590 glycoside hydrolase family 57 protein K07405 E3.2.1.1A; alpha-amylase [EC:3.2.1.1] D J5A55_07845 glycoside hydrolase family 97 protein K21574 susB; glucan 1,4-alpha-glucosidase [EC:3.2.1.3] D J5A55_07560 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25] D J5A55_03750 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D J5A55_04350 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D J5A55_01710 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D J5A55_07725 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D J5A55_07910 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:pvf00520] D J5A55_05710 family 20 glycosylhydrolase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D J5A55_06135 family 20 glycosylhydrolase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D J5A55_09055 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D J5A55_09070 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D J5A55_05325 glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6] D J5A55_05330 glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6] D J5A55_07725 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D J5A55_07910 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D J5A55_11160 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D J5A55_07170 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D J5A55_02730 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D J5A55_10690 AGE family epimerase/isomerase K01787 RENBP; N-acylglucosamine 2-epimerase [EC:5.1.3.8] D J5A55_09715 dihydrodipicolinate synthase family protein K01639 E4.1.3.3; N-acetylneuraminate lyase [EC:4.1.3.3] D J5A55_02460 UDP-N-acetyl glucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D J5A55_04350 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D J5A55_03750 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D J5A55_02270 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D J5A55_05545 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D J5A55_03385 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D J5A55_04750 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D J5A55_01710 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D J5A55_06260 class I mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D J5A55_02300 glmM; phosphoglucosamine mutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D J5A55_00440 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D J5A55_11995 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D J5A55_11625 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47] D J5A55_11620 GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271] C 00620 Pyruvate metabolism [PATH:pvf00620] D J5A55_04955 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D J5A55_00125 2-oxoacid:acceptor oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D J5A55_02545 3-methyl-2-oxobutanoate dehydrogenase subunit VorB K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D J5A55_00130 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D J5A55_02550 2-oxoglutarate oxidoreductase K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D J5A55_11105 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D J5A55_00930 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D J5A55_00925 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D J5A55_05565 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D J5A55_12075 2-hydroxyacid dehydrogenase K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28] D J5A55_03615 MBL fold metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D J5A55_03560 NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D J5A55_01995 biotin/lipoyl-binding protein K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1] D J5A55_06995 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D J5A55_05270 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D J5A55_00175 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D J5A55_04920 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:pvf00630] D J5A55_06995 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D J5A55_09660 D-2-hydroxyacid dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29] D J5A55_04090 HAD family hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D J5A55_09640 HAD family hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D J5A55_02280 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D J5A55_07305 glutamine synthetase III K01915 glnA; glutamine synthetase [EC:6.3.1.2] D J5A55_11575 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D J5A55_11095 gcvPA; aminomethyl-transferring glycine dehydrogenase subunit GcvPA K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D J5A55_11100 gcvPB; aminomethyl-transferring glycine dehydrogenase subunit GcvPB K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D J5A55_11085 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D J5A55_11105 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D J5A55_11090 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein C 00640 Propanoate metabolism [PATH:pvf00640] D J5A55_00930 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D J5A55_00925 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D J5A55_11105 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D J5A55_02920 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D J5A55_02915 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] C 00650 Butanoate metabolism [PATH:pvf00650] D J5A55_02925 buk; butyrate kinase K00929 buk; butyrate kinase [EC:2.7.2.7] D J5A55_02930 phosphate butyryltransferase K00634 ptb; phosphate butyryltransferase [EC:2.3.1.19] D J5A55_03810 biotin/lipoyl-binding protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma D J5A55_07865 fumarate reductase/succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D J5A55_07870 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D J5A55_07860 succinate dehydrogenase/fumarate reductase cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D J5A55_04955 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D J5A55_00125 2-oxoacid:acceptor oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D J5A55_02545 3-methyl-2-oxobutanoate dehydrogenase subunit VorB K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D J5A55_00130 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D J5A55_02550 2-oxoglutarate oxidoreductase K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] C 00660 C5-Branched dibasic acid metabolism D J5A55_02920 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D J5A55_02915 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] C 00562 Inositol phosphate metabolism D J5A55_11840 inositol-3-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:pvf00190] D J5A55_03090 NADH-quinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2] D J5A55_03095 NADH-quinone oxidoreductase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2] D J5A55_03100 NADH-quinone oxidoreductase subunit D K13378 nuoCD; NADH-quinone oxidoreductase subunit C/D [EC:7.1.1.2] D J5A55_03105 nuoH; NADH-quinone oxidoreductase subunit NuoH K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2] D J5A55_03110 NADH-quinone oxidoreductase subunit I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2] D J5A55_03115 NADH-quinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2] D J5A55_03120 nuoK; NADH-quinone oxidoreductase subunit NuoK K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2] D J5A55_03125 NADH-quinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2] D J5A55_03130 NADH-quinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2] D J5A55_03135 NADH-quinone oxidoreductase subunit N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2] D J5A55_07900 NAD(P)/FAD-dependent oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] D J5A55_07865 fumarate reductase/succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D J5A55_07870 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D J5A55_07860 succinate dehydrogenase/fumarate reductase cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D J5A55_11260 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D J5A55_11265 cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D J5A55_09430 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D J5A55_09465 F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D J5A55_09425 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D J5A55_09435 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D J5A55_09460 atpC; ATP synthase F1 subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D J5A55_09450 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D J5A55_09440 atpF; F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D J5A55_09445 atpE; ATP synthase F0 subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation in photosynthetic organisms C 00720 Carbon fixation pathways in prokaryotes C 00680 Methane metabolism [PATH:pvf00680] D J5A55_11575 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D J5A55_09660 D-2-hydroxyacid dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29] D J5A55_11000 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D J5A55_06995 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D J5A55_06570 class II fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D J5A55_10720 fructose-bisphosphatase class III K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11] D J5A55_09470 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D J5A55_00930 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D J5A55_00925 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D J5A55_05685 histidine phosphatase family protein K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D J5A55_07435 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D J5A55_03345 3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D J5A55_03340 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D J5A55_04415 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 00910 Nitrogen metabolism [PATH:pvf00910] D J5A55_12105 nrfA; ammonia-forming cytochrome c nitrite reductase K03385 nrfA; nitrite reductase (cytochrome c-552) [EC:1.7.2.2] D J5A55_12110 nrfH; cytochrome c nitrite reductase small subunit K15876 nrfH; cytochrome c nitrite reductase small subunit D J5A55_11630 hcp; hydroxylamine reductase K05601 hcp; hydroxylamine reductase [EC:1.7.99.1] D J5A55_06705 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D J5A55_02280 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D J5A55_07305 glutamine synthetase III K01915 glnA; glutamine synthetase [EC:6.3.1.2] D J5A55_09755 bifunctional dihydroorotate dehydrogenase B NAD binding subunit/NADPH-dependent glutamate synthase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] C 00920 Sulfur metabolism [PATH:pvf00920] D J5A55_09250 DHH family phosphoesterase K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] D J5A55_11885 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D J5A55_01185 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:pvf00061] D J5A55_00010 acyl carrier protein K02078 acpP; acyl carrier protein D J5A55_04220 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D J5A55_01310 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D J5A55_00015 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D J5A55_11800 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D J5A55_08910 bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/3-hydroxyacyl-ACP dehydratase K16363 lpxC-fabZ; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:3.5.1.108 4.2.1.59] D J5A55_00510 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D J5A55_00575 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D J5A55_03975 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00062 Fatty acid elongation C 00071 Fatty acid degradation D J5A55_00575 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D J5A55_03975 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:pvf00561] D J5A55_02105 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D J5A55_00645 glycoside hydrolase family 27 protein K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] D J5A55_08590 glycoside hydrolase family 27 protein K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] C 00564 Glycerophospholipid metabolism [PATH:pvf00564] D J5A55_01705 NAD(P)-binding domain-containing protein K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D J5A55_02105 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D J5A55_01635 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D J5A55_06185 CDP-alcohol phosphatidyltransferase family protein K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D J5A55_06180 phosphatidylserine decarboxylase family protein K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D J5A55_07230 HAD-IB family hydrolase K18697 pgpC; phosphatidylglycerophosphatase C [EC:3.1.3.27] D J5A55_03020 cls; cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] D J5A55_08685 cls; cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism [PATH:pvf00600] D J5A55_01615 DUF4981 domain-containing protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D J5A55_05340 DUF4981 domain-containing protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D J5A55_05335 exo-alpha-sialidase K01186 NEU1; sialidase-1 [EC:3.2.1.18] D J5A55_00645 glycoside hydrolase family 27 protein K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] D J5A55_08590 glycoside hydrolase family 27 protein K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] D J5A55_05710 family 20 glycosylhydrolase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D J5A55_06135 family 20 glycosylhydrolase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D J5A55_09055 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D J5A55_09070 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism C 01040 Biosynthesis of unsaturated fatty acids B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:pvf00230] D J5A55_10680 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D J5A55_03750 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D J5A55_11810 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D J5A55_11155 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D J5A55_11870 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D J5A55_11940 purT; formate-dependent phosphoribosylglycinamide formyltransferase K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21] D J5A55_07145 purL; phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] D J5A55_03435 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D J5A55_08250 purE; 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D J5A55_03450 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D J5A55_01275 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D J5A55_06380 phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D J5A55_08140 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D J5A55_06410 bifunctional metallophosphatase/5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D J5A55_01490 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D J5A55_04575 purine-nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1] D J5A55_06545 pgeF; peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D J5A55_06560 hpt; hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D J5A55_01080 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D J5A55_08215 non-canonical purine NTP diphosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D J5A55_06125 xpt; xanthine phosphoribosyltransferase K03816 xpt; xanthine phosphoribosyltransferase [EC:2.4.2.22] D J5A55_04625 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D J5A55_05210 nucleoside deaminase K01487 guaD; guanine deaminase [EC:3.5.4.3] D J5A55_07190 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D J5A55_00035 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D J5A55_05900 adenosylcobalamin-dependent ribonucleoside-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D J5A55_00040 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D J5A55_11025 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D J5A55_00545 dgt; dNTP triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1] D J5A55_01465 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D J5A55_03585 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D J5A55_00590 CYTH domain-containing protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1] D J5A55_12120 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D J5A55_10980 deoxynucleoside kinase K15519 dck; deoxyadenosine/deoxycytidine kinase [EC:2.7.1.76 2.7.1.74] D J5A55_10985 deoxynucleoside kinase K15519 dck; deoxyadenosine/deoxycytidine kinase [EC:2.7.1.76 2.7.1.74] D J5A55_04515 bifunctional metallophosphatase/5'-nucleotidase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6] D J5A55_06555 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00240 Pyrimidine metabolism [PATH:pvf00240] D J5A55_11145 carB; carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D J5A55_11150 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D J5A55_11905 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D J5A55_11915 aspartate carbamoyltransferase regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit D J5A55_02095 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D J5A55_02195 dihydroorotate dehydrogenase K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14] D J5A55_02190 dihydroorotate dehydrogenase electron transfer subunit K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit D J5A55_00830 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D J5A55_03415 pyrF; orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D J5A55_06200 UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D J5A55_03735 maf; septum formation protein Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D J5A55_09045 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2] D J5A55_11170 (d)CMP kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D J5A55_00240 nucleoside kinase K00876 udk; uridine kinase [EC:2.7.1.48] D J5A55_05215 udk; uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48] D J5A55_06410 bifunctional metallophosphatase/5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D J5A55_01490 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D J5A55_09120 nucleoside phosphorylase K00757 udp; uridine phosphorylase [EC:2.4.2.3] D J5A55_00170 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D J5A55_04515 bifunctional metallophosphatase/5'-nucleotidase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6] D J5A55_00225 cdd; cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5] D J5A55_11025 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D J5A55_00035 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D J5A55_05900 adenosylcobalamin-dependent ribonucleoside-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D J5A55_00040 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D J5A55_10980 deoxynucleoside kinase K15519 dck; deoxyadenosine/deoxycytidine kinase [EC:2.7.1.76 2.7.1.74] D J5A55_10985 deoxynucleoside kinase K15519 dck; deoxyadenosine/deoxycytidine kinase [EC:2.7.1.76 2.7.1.74] D J5A55_08750 dCMP deaminase family protein K01493 comEB; dCMP deaminase [EC:3.5.4.12] D J5A55_00550 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D J5A55_06245 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21] D J5A55_11735 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D J5A55_11715 SDR family oxidoreductase K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:pvf00250] D J5A55_03495 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D J5A55_06370 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D J5A55_09420 type I asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D J5A55_08115 aspA; aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1] D J5A55_12120 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D J5A55_01275 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D J5A55_11905 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D J5A55_11915 aspartate carbamoyltransferase regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit D J5A55_09755 bifunctional dihydroorotate dehydrogenase B NAD binding subunit/NADPH-dependent glutamate synthase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D J5A55_06705 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D J5A55_02280 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D J5A55_07305 glutamine synthetase III K01915 glnA; glutamine synthetase [EC:6.3.1.2] D J5A55_11145 carB; carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D J5A55_11150 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D J5A55_11160 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D J5A55_11155 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:pvf00260] D J5A55_10740 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D J5A55_01035 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D J5A55_12060 hypothetical protein K01733 thrC; threonine synthase [EC:4.2.3.1] D J5A55_11575 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D J5A55_09660 D-2-hydroxyacid dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29] D J5A55_05685 histidine phosphatase family protein K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D J5A55_07435 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D J5A55_03345 3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D J5A55_03340 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D J5A55_04415 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D J5A55_11715 SDR family oxidoreductase K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-] D J5A55_00970 kbl; glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29] D J5A55_11095 gcvPA; aminomethyl-transferring glycine dehydrogenase subunit GcvPA K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D J5A55_11100 gcvPB; aminomethyl-transferring glycine dehydrogenase subunit GcvPB K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D J5A55_11085 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D J5A55_11105 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D J5A55_11090 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein D J5A55_06185 CDP-alcohol phosphatidyltransferase family protein K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D J5A55_12130 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] C 00270 Cysteine and methionine metabolism [PATH:pvf00270] D J5A55_11885 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D J5A55_01185 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D J5A55_00375 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D J5A55_08480 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D J5A55_05960 5'-methylthioadenosine/adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9] D J5A55_06545 pgeF; peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D J5A55_01750 GAF domain-containing protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14] D J5A55_07800 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D J5A55_11430 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D J5A55_05965 S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21] D J5A55_10740 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D J5A55_01035 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D J5A55_08675 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D J5A55_03495 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D J5A55_06370 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D J5A55_06995 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D J5A55_12130 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D J5A55_03345 3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D J5A55_03340 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00280 Valine, leucine and isoleucine degradation [PATH:pvf00280] D J5A55_08675 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D J5A55_11105 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:pvf00290] D J5A55_08675 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] C 00300 Lysine biosynthesis [PATH:pvf00300] D J5A55_10740 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D J5A55_01035 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D J5A55_03410 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D J5A55_08090 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D J5A55_10735 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D J5A55_01585 diaminopimelate dehydrogenase K03340 dapdh; diaminopimelate dehydrogenase [EC:1.4.1.16] D J5A55_07340 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D J5A55_00895 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D J5A55_05920 bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase/alanine racemase K01798 alr-murF; Alr-MurF fusion protein [EC:5.1.1.1 6.3.2.10] C 00310 Lysine degradation D J5A55_11105 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 00220 Arginine biosynthesis [PATH:pvf00220] D J5A55_02280 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D J5A55_07305 glutamine synthetase III K01915 glnA; glutamine synthetase [EC:6.3.1.2] D J5A55_11145 carB; carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D J5A55_11150 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D J5A55_06705 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D J5A55_03495 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D J5A55_06370 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] C 00330 Arginine and proline metabolism [PATH:pvf00330] D J5A55_07755 speA; biosynthetic arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19] D J5A55_02125 carbon-nitrogen hydrolase K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53] D J5A55_11820 nspC; carboxynorspermidine decarboxylase K13747 nspC; carboxynorspermidine decarboxylase [EC:4.1.1.96] D J5A55_09550 GNAT family N-acetyltransferase K00657 speG; diamine N-acetyltransferase [EC:2.3.1.57] D J5A55_03495 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D J5A55_06370 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] C 00340 Histidine metabolism C 00350 Tyrosine metabolism D J5A55_03495 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D J5A55_06370 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] C 00360 Phenylalanine metabolism D J5A55_03495 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D J5A55_06370 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] C 00380 Tryptophan metabolism D J5A55_11105 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:pvf00400] D J5A55_01860 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D J5A55_00345 aroQ; type II 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D J5A55_07760 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D J5A55_06145 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D J5A55_02205 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D J5A55_04385 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D J5A55_04390 phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24] D J5A55_02495 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase type II K04516 AROA1; chorismate mutase [EC:5.4.99.5] D J5A55_03495 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D J5A55_06370 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:pvf00410] D J5A55_03805 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D J5A55_03800 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] C 00430 Taurine and hypotaurine metabolism [PATH:pvf00430] D J5A55_00925 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D J5A55_00930 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] C 00440 Phosphonate and phosphinate metabolism D J5A55_02735 MBL fold metallo-hydrolase K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55] C 00450 Selenocompound metabolism [PATH:pvf00450] D J5A55_07470 cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D J5A55_10990 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D J5A55_00735 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:pvf00460] D J5A55_08605 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D J5A55_09420 type I asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D J5A55_11575 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:pvf00470] D J5A55_05920 bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase/alanine racemase K01798 alr-murF; Alr-MurF fusion protein [EC:5.1.1.1 6.3.2.10] D J5A55_00630 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D J5A55_00215 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D J5A55_07350 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D J5A55_10735 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] C 00480 Glutathione metabolism [PATH:pvf00480] D J5A55_01765 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-] D J5A55_03690 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-] D J5A55_02415 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9] D J5A55_03995 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9] D J5A55_08010 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation [PATH:pvf00511] D J5A55_05335 exo-alpha-sialidase K01186 NEU1; sialidase-1 [EC:3.2.1.18] D J5A55_01615 DUF4981 domain-containing protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D J5A55_05340 DUF4981 domain-containing protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D J5A55_05710 family 20 glycosylhydrolase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D J5A55_06135 family 20 glycosylhydrolase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D J5A55_09055 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D J5A55_09070 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D J5A55_05315 alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51] D J5A55_09065 alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51] D J5A55_07410 glycoside hydrolase family 95 protein K15923 AXY8; alpha-L-fucosidase 2 [EC:3.2.1.51] C 00540 Lipopolysaccharide biosynthesis [PATH:pvf00540] D J5A55_08915 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D J5A55_08910 bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/3-hydroxyacyl-ACP dehydratase K16363 lpxC-fabZ; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:3.5.1.108 4.2.1.59] D J5A55_08905 lpxD; UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D J5A55_00935 UDP-2,3-diacylglucosamine diphosphatase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D J5A55_01495 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D J5A55_04570 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D J5A55_03025 KpsF/GutQ family sugar-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D J5A55_03030 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D J5A55_03730 HAD-IIIA family hydrolase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D J5A55_01785 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D J5A55_03720 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D J5A55_01775 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D J5A55_01780 lysophospholipid acyltransferase family protein K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D J5A55_01815 phosphoethanolamine transferase K19353 eptC; heptose-I-phosphate ethanolaminephosphotransferase [EC:2.7.8.-] D J5A55_02265 phosphoethanolamine transferase K19353 eptC; heptose-I-phosphate ethanolaminephosphotransferase [EC:2.7.8.-] D J5A55_07250 sulfatase-like hydrolase/transferase K19353 eptC; heptose-I-phosphate ethanolaminephosphotransferase [EC:2.7.8.-] D J5A55_08850 phosphoethanolamine transferase K19353 eptC; heptose-I-phosphate ethanolaminephosphotransferase [EC:2.7.8.-] C 00542 O-Antigen repeat unit biosynthesis C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:pvf00541] D J5A55_03385 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D J5A55_04750 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D J5A55_02270 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D J5A55_02960 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D J5A55_11935 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D J5A55_11045 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D J5A55_04365 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D J5A55_06260 class I mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D J5A55_02300 glmM; phosphoglucosamine mutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D J5A55_00440 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D J5A55_11995 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D J5A55_11625 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47] D J5A55_11620 GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271] D J5A55_02460 UDP-N-acetyl glucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] C 00550 Peptidoglycan biosynthesis [PATH:pvf00550] D J5A55_07170 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D J5A55_02730 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D J5A55_07365 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D J5A55_07350 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D J5A55_07340 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D J5A55_00630 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D J5A55_00895 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D J5A55_05920 bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase/alanine racemase K01798 alr-murF; Alr-MurF fusion protein [EC:5.1.1.1 6.3.2.10] D J5A55_00190 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D J5A55_06015 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D J5A55_03935 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D J5A55_11660 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D J5A55_07345 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D J5A55_07360 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D J5A55_03595 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D J5A55_08925 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D J5A55_11900 transglycosylase domain-containing protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D J5A55_06290 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D J5A55_11895 penicillin-binding protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D J5A55_07335 transpeptidase family protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D J5A55_01575 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] C 00552 Teichoic acid biosynthesis [PATH:pvf00552] D J5A55_06015 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D J5A55_03935 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D J5A55_11660 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D J5A55_07270 LicD family protein K07271 licD; lipopolysaccharide cholinephosphotransferase [EC:2.7.8.-] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:pvf00543] D J5A55_03575 MBOAT family protein K19294 algI; alginate O-acetyltransferase complex protein AlgI D J5A55_06095 MBOAT family protein K19294 algI; alginate O-acetyltransferase complex protein AlgI D J5A55_11885 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:pvf00730] D J5A55_00415 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D J5A55_01215 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D J5A55_11815 thiamine phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D J5A55_04580 thiamine-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16] D J5A55_01740 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D J5A55_05875 thiamine diphosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2] D J5A55_06555 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:pvf00740] D J5A55_06450 bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D J5A55_08475 ribA; GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D J5A55_00810 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D J5A55_10755 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D J5A55_11110 riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9] D J5A55_01830 ribF; riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D J5A55_10705 phosphatase PAP2 family protein K09474 phoN; acid phosphatase (class A) [EC:3.1.3.2] D J5A55_10680 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] C 00750 Vitamin B6 metabolism [PATH:pvf00750] D J5A55_00715 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35] D J5A55_03340 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D J5A55_12060 hypothetical protein K01733 thrC; threonine synthase [EC:4.2.3.1] D J5A55_00420 pdxS; pyridoxal 5'-phosphate synthase lyase subunit PdxS K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6] D J5A55_00425 pdxT; pyridoxal 5'-phosphate synthase glutaminase subunit PdxT K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6] C 00760 Nicotinate and nicotinamide metabolism [PATH:pvf00760] D J5A55_12090 pncB; nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D J5A55_04575 purine-nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1] D J5A55_06410 bifunctional metallophosphatase/5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D J5A55_01490 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D J5A55_07195 nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D J5A55_04520 nudC; NAD(+) diphosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22] D J5A55_03920 NAD(+) synthase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1] D J5A55_04035 CinA family protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42] D J5A55_02200 isochorismatase family protein K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-] D J5A55_08015 NAD-dependent deacylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313] D J5A55_07590 NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] C 00770 Pantothenate and CoA biosynthesis [PATH:pvf00770] D J5A55_03630 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D J5A55_03800 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D J5A55_04200 coaW; type II pantothenate kinase K09680 PANK1_2_3; type II pantothenate kinase [EC:2.7.1.33] D J5A55_03155 coaBC; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D J5A55_07935 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D J5A55_01915 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D J5A55_04430 4'-phosphopantetheinyl transferase K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-] D J5A55_08675 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D J5A55_03805 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] C 00780 Biotin metabolism [PATH:pvf00780] D J5A55_00015 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D J5A55_11800 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D J5A55_00510 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D J5A55_04475 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D J5A55_06205 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:pvf00785] D J5A55_11105 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D J5A55_11095 gcvPA; aminomethyl-transferring glycine dehydrogenase subunit GcvPA K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D J5A55_11100 gcvPB; aminomethyl-transferring glycine dehydrogenase subunit GcvPB K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D J5A55_11085 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D J5A55_11090 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:pvf00790] D J5A55_06075 folE; GTP cyclohydrolase I FolE K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16] D J5A55_05895 folB; dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D J5A55_04650 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D J5A55_06000 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D J5A55_00910 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D J5A55_11730 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D J5A55_05505 bifunctional folylpolyglutamate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D J5A55_06450 bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D J5A55_08475 ribA; GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D J5A55_08265 aminodeoxychorismate synthase component I K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85] D J5A55_08270 aminotransferase class IV K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38] D J5A55_09735 queC; 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D J5A55_01965 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] C 00670 One carbon pool by folate [PATH:pvf00670] D J5A55_11730 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D J5A55_11230 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3] D J5A55_02530 folD; bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D J5A55_11575 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D J5A55_06380 phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D J5A55_04335 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D J5A55_11085 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D J5A55_11735 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D J5A55_08740 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:pvf00860] D J5A55_07025 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D J5A55_00385 uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75] D J5A55_07090 cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:pvf00130] D J5A55_03445 ubiE; bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D J5A55_01690 isochorismate synthase K02361 entC; isochorismate synthase [EC:5.4.4.2] D J5A55_01685 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9] D J5A55_01665 AMP-binding protein K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26] D J5A55_01680 menB; 1,4-dihydroxy-2-naphthoyl-CoA synthase K01661 menB; naphthoate synthase [EC:4.1.3.36] D J5A55_05200 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:pvf00900] D J5A55_01215 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D J5A55_07160 1-deoxy-D-xylulose-5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D J5A55_07275 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] D J5A55_07600 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] D J5A55_03710 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D J5A55_07645 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] D J5A55_08255 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D J5A55_02780 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D J5A55_10785 polyprenyl synthetase family protein K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D J5A55_08165 polyprenyl synthetase family protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D J5A55_00190 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation C 00907 Pinene, camphor and geraniol degradation C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D J5A55_05555 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis [PATH:pvf00523] D J5A55_02960 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D J5A55_11935 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D J5A55_11045 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D J5A55_04365 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides D J5A55_01690 isochorismate synthase K02361 entC; isochorismate synthase [EC:5.4.4.2] C 01055 Biosynthesis of vancomycin group antibiotics D J5A55_11935 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids [PATH:pvf00946] D J5A55_08605 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis C 00332 Carbapenem biosynthesis C 00261 Monobactam biosynthesis [PATH:pvf00261] D J5A55_10740 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D J5A55_01035 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D J5A55_03410 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D J5A55_08090 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:pvf00521] D J5A55_04350 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D J5A55_03750 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D J5A55_11840 inositol-3-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4] D J5A55_02960 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D J5A55_11935 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D J5A55_11045 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D J5A55_04365 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 00524 Neomycin, kanamycin and gentamicin biosynthesis D J5A55_04350 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] C 00525 Acarbose and validamycin biosynthesis [PATH:pvf00525] D J5A55_02960 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D J5A55_11935 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis D J5A55_03495 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D J5A55_06370 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis D J5A55_04385 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis D J5A55_04220 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D J5A55_11800 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D J5A55_00510 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D J5A55_00010 acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites [PATH:pvf00999] D J5A55_00375 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D J5A55_08480 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D J5A55_08605 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:pvf00362] D J5A55_05765 carboxymuconolactone decarboxylase family protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44] D J5A55_03810 biotin/lipoyl-binding protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma C 00627 Aminobenzoate degradation C 00364 Fluorobenzoate degradation C 00625 Chloroalkane and chloroalkene degradation C 00361 Chlorocyclohexane and chlorobenzene degradation C 00623 Toluene degradation C 00622 Xylene degradation C 00633 Nitrotoluene degradation C 00642 Ethylbenzene degradation C 00643 Styrene degradation C 00791 Atrazine degradation C 00930 Caprolactam degradation C 00363 Bisphenol degradation C 00621 Dioxin degradation C 00626 Naphthalene degradation C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:pvf03020] D J5A55_06910 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D J5A55_06905 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D J5A55_06725 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:pvf03010] D J5A55_12190 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D J5A55_07670 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D J5A55_06830 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D J5A55_06730 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D J5A55_06775 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D J5A55_04245 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D J5A55_06875 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D J5A55_06790 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D J5A55_07675 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D J5A55_06865 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D J5A55_06735 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D J5A55_06880 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D J5A55_06740 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D J5A55_06795 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D J5A55_05990 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D J5A55_03705 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D J5A55_06815 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D J5A55_04240 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D J5A55_06840 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D J5A55_07400 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D J5A55_06985 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D J5A55_06925 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D J5A55_06845 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D J5A55_06860 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D J5A55_06855 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D J5A55_06800 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D J5A55_06785 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D J5A55_06915 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D J5A55_04235 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D J5A55_06920 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D J5A55_06930 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D J5A55_07680 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D J5A55_06810 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D J5A55_06765 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D J5A55_06825 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D J5A55_06720 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D J5A55_06780 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D J5A55_06395 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D J5A55_04840 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D J5A55_10675 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D J5A55_06835 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D J5A55_06850 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D J5A55_06805 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D J5A55_01895 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25 D J5A55_10670 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D J5A55_04030 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D J5A55_06820 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D J5A55_06770 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D J5A55_05245 type B 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D J5A55_01305 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D J5A55_04025 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D J5A55_00615 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D J5A55_04845 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D J5A55_06745 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D J5A55_08990 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D J5A55_00270 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D J5A55_01000 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D J5A55_00280 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:pvf00970] D J5A55_07115 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D J5A55_08980 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D J5A55_09650 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D J5A55_03175 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D J5A55_02120 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D J5A55_09555 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D J5A55_09560 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D J5A55_01820 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D J5A55_04450 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D J5A55_04465 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D J5A55_06960 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D J5A55_02315 tRNA-His K14226 tRNA-His; tRNA His D J5A55_07120 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D J5A55_08985 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D J5A55_04455 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D J5A55_00445 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D J5A55_11565 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D J5A55_09235 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D J5A55_09240 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D J5A55_01825 tRNA-Ile K14230 tRNA-Met; tRNA Met D J5A55_04585 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D J5A55_04470 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D J5A55_06970 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D J5A55_09380 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D J5A55_09225 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D J5A55_01265 tRNA-Val K14237 tRNA-Val; tRNA Val D J5A55_01270 tRNA-Val K14237 tRNA-Val; tRNA Val D J5A55_04530 tRNA-Val K14237 tRNA-Val; tRNA Val D J5A55_07025 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D J5A55_03770 glutamine--tRNA ligase/YqeY domain fusion protein K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D J5A55_01435 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D J5A55_12010 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D J5A55_01285 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D J5A55_01235 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D J5A55_02800 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D J5A55_09750 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D J5A55_00245 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D J5A55_00735 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D J5A55_04335 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D J5A55_11980 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D J5A55_08225 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D J5A55_08730 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D J5A55_01700 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D J5A55_00525 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D J5A55_09295 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D J5A55_12125 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D J5A55_02715 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D J5A55_11125 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D J5A55_00400 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D J5A55_07015 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:pvf03060] D J5A55_06760 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D J5A55_06940 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D J5A55_02320 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D J5A55_07640 hypothetical protein K03072 secD; preprotein translocase subunit SecD D J5A55_00705 secDF; protein translocase subunit SecDF K12257 secDF; SecD/SecF fusion protein D J5A55_01905 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D J5A55_09040 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D J5A55_04155 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D J5A55_02525 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D J5A55_03640 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D J5A55_08095 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D J5A55_08720 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system D J5A55_08465 ThiF family adenylyltransferase K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80] C 03050 Proteasome C 03018 RNA degradation [PATH:pvf03018] D J5A55_11000 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D J5A55_07810 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D J5A55_00065 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D J5A55_07895 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D J5A55_01085 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D J5A55_02570 RecQ family ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D J5A55_03605 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D J5A55_02980 rny; ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-] D J5A55_02380 MBL fold metallo-hydrolase K12574 rnj; ribonuclease J [EC:3.1.-.-] D J5A55_09470 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D J5A55_01165 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D J5A55_04545 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D J5A55_06055 HD domain-containing protein K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:pvf03030] D J5A55_02585 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D J5A55_03150 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D J5A55_06175 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D J5A55_02075 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D J5A55_06270 DNA polymerase III subunit delta K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D J5A55_02180 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D J5A55_03145 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D J5A55_03715 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D J5A55_08695 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D J5A55_11305 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D J5A55_04440 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D J5A55_00515 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D J5A55_07460 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D J5A55_08170 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D J5A55_02655 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D J5A55_10385 AAA family ATPase K10742 DNA2; DNA replication ATP-dependent helicase/nuclease Dna2 [EC:5.6.2.3 3.1.-.-] C 03410 Base excision repair [PATH:pvf03410] D J5A55_04005 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D J5A55_07425 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D J5A55_06320 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D J5A55_06085 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D J5A55_08170 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D J5A55_02575 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D J5A55_02655 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:pvf03420] D J5A55_02025 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D J5A55_09275 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A D J5A55_10895 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A D J5A55_04995 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B D J5A55_08145 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C D J5A55_02600 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D J5A55_03600 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D J5A55_08170 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D J5A55_02655 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03430 Mismatch repair [PATH:pvf03430] D J5A55_08280 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D J5A55_11400 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D J5A55_11750 endonuclease MutS2 K07456 mutS2; DNA mismatch repair protein MutS2 D J5A55_01055 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL D J5A55_02600 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D J5A55_03600 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D J5A55_08665 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D J5A55_08670 xseB; exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D J5A55_02575 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D J5A55_04440 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D J5A55_06175 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D J5A55_03145 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D J5A55_02075 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D J5A55_02180 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D J5A55_06270 DNA polymerase III subunit delta K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D J5A55_02585 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D J5A55_03150 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D J5A55_02655 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03440 Homologous recombination [PATH:pvf03440] D J5A55_02575 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D J5A55_04440 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D J5A55_10765 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF D J5A55_07395 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D J5A55_09535 recR; recombination protein RecR K06187 recR; recombination protein RecR D J5A55_01410 recA; recombinase RecA K03553 recA; recombination protein RecA D J5A55_08170 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D J5A55_01395 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA D J5A55_07930 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D J5A55_03610 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D J5A55_07605 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D J5A55_06175 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D J5A55_03145 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D J5A55_02075 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D J5A55_02180 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D J5A55_06270 DNA polymerase III subunit delta K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D J5A55_02585 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D J5A55_03150 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D J5A55_07050 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:pvf02010] D J5A55_05885 MCE family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D J5A55_01350 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D J5A55_01355 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D J5A55_00330 ABC transporter permease K09808 lolC_E; lipoprotein-releasing system permease protein D J5A55_03490 ABC transporter permease K09808 lolC_E; lipoprotein-releasing system permease protein D J5A55_01020 ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D J5A55_06445 LptF/LptG family permease K07091 lptF; lipopolysaccharide export system permease protein D J5A55_04500 LptF/LptG family permease K11720 lptG; lipopolysaccharide export system permease protein D J5A55_01340 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D J5A55_06025 permease-like cell division protein FtsX K09811 ftsX; cell division transport system permease protein D J5A55_10745 ATP-binding cassette domain-containing protein K09812 ftsE; cell division transport system ATP-binding protein D J5A55_00110 ABC transporter ATP-binding protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] C 02060 Phosphotransferase system (PTS) C 03070 Bacterial secretion system [PATH:pvf03070] D J5A55_07640 hypothetical protein K03072 secD; preprotein translocase subunit SecD D J5A55_00705 secDF; protein translocase subunit SecDF K12257 secDF; SecD/SecF fusion protein D J5A55_06940 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D J5A55_02320 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D J5A55_06760 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D J5A55_01905 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D J5A55_09040 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D J5A55_04155 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D J5A55_03640 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D J5A55_02525 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] B B 09132 Signal transduction C 02020 Two-component system [PATH:pvf02020] D J5A55_04255 HAMP domain-containing histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D J5A55_10705 phosphatase PAP2 family protein K09474 phoN; acid phosphatase (class A) [EC:3.1.3.2] D J5A55_02865 trypsin-like peptidase domain-containing protein K04771 degP; serine protease Do [EC:3.4.21.107] D J5A55_05880 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D J5A55_08000 M15 family metallopeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D J5A55_02280 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D J5A55_07305 glutamine synthetase III K01915 glnA; glutamine synthetase [EC:6.3.1.2] D J5A55_08240 rpoN; RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D J5A55_11260 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D J5A55_11265 cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D J5A55_11165 polysaccharide biosynthesis/export family protein K01991 wza; polysaccharide biosynthesis/export protein D J5A55_11700 low molecular weight phosphotyrosine protein phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48] D J5A55_02955 polysaccharide biosynthesis tyrosine autokinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3] D J5A55_02460 UDP-N-acetyl glucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:pvf02024] D J5A55_05965 S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21] D J5A55_04385 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D J5A55_00575 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D J5A55_03975 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D J5A55_08310 beta-mannosidase K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78] D J5A55_08610 beta-mannosidase K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78] D J5A55_00810 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D J5A55_06040 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system D J5A55_09040 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D J5A55_00705 secDF; protein translocase subunit SecDF K12257 secDF; SecD/SecF fusion protein D J5A55_06940 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D J5A55_02320 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D J5A55_06760 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D J5A55_01905 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D J5A55_04155 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D J5A55_03640 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D J5A55_02525 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis D J5A55_07130 OmpA family protein K02557 motB; chemotaxis protein MotB C 02040 Flagellar assembly [PATH:pvf02040] D J5A55_07130 OmpA family protein K02557 motB; chemotaxis protein MotB D J5A55_02860 sigma-70 family RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor D J5A55_03755 sigma-70 family RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor D J5A55_09335 RNA polymerase sigma factor RpoD/SigA K03086 rpoD; RNA polymerase primary sigma factor D J5A55_08240 rpoN; RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D J5A55_11000 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism D J5A55_07090 cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:pvf01501] D J5A55_02440 MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D J5A55_05320 MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D J5A55_06335 MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D J5A55_06050 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D J5A55_08955 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D J5A55_06040 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system D J5A55_08925 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D J5A55_11900 transglycosylase domain-containing protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D J5A55_06290 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D J5A55_11895 penicillin-binding protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D J5A55_07335 transpeptidase family protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:pvf01502] D J5A55_08000 M15 family metallopeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D J5A55_00630 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D J5A55_05920 bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase/alanine racemase K01798 alr-murF; Alr-MurF fusion protein [EC:5.1.1.1 6.3.2.10] D J5A55_00895 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D J5A55_07345 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D J5A55_07360 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:pvf01503] D J5A55_05890 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D J5A55_02865 trypsin-like peptidase domain-containing protein K04771 degP; serine protease Do [EC:3.4.21.107] D J5A55_06050 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D J5A55_08955 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D J5A55_08915 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:pvf01000] C 01001 Protein kinases [BR:pvf01001] D J5A55_08005 serine/threonine protein kinase K22893 pknH; serine/threonine kinase PknH [EC:2.7.11.1] D J5A55_00620 PASTA domain-containing protein K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D J5A55_01975 HipA domain-containing protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D J5A55_02955 polysaccharide biosynthesis tyrosine autokinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3] D J5A55_04255 HAMP domain-containing histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:pvf01009] D J5A55_09470 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D J5A55_03590 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG D J5A55_04415 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 01002 Peptidases and inhibitors [BR:pvf01002] D J5A55_08720 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] D J5A55_01610 C1 family peptidase K01372 BLMH; bleomycin hydrolase [EC:3.4.22.40] D J5A55_04625 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D J5A55_11155 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D J5A55_11160 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D J5A55_07595 DJ-1/PfpI family protein K03152 thiJ; protein deglycase [EC:3.5.1.124] D J5A55_00785 C69 family dipeptidase K08659 pepDA; dipeptidase [EC:3.4.-.-] D J5A55_01835 CPBP family intramembrane metalloprotease K07052 K07052; CAAX protease family protein D J5A55_08885 CPBP family intramembrane metalloprotease K07052 K07052; CAAX protease family protein D J5A55_08755 M3 family metallopeptidase K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5] D J5A55_04770 M13 family metallopeptidase K07386 pepO; putative endopeptidase [EC:3.4.24.-] D J5A55_07285 M13 family metallopeptidase K07386 pepO; putative endopeptidase [EC:3.4.24.-] D J5A55_08000 M15 family metallopeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D J5A55_00360 insulinase family protein K07263 pqqL; zinc protease [EC:3.4.24.-] D J5A55_10960 insulinase family protein K07263 pqqL; zinc protease [EC:3.4.24.-] D J5A55_02040 pepT; peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4] D J5A55_01765 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-] D J5A55_03690 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-] D J5A55_04045 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D J5A55_06755 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D J5A55_02700 aminopeptidase P N-terminal domain-containing protein K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D J5A55_06990 aminopeptidase P family protein K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D J5A55_01640 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D J5A55_00980 M48 family metallopeptidase K07387 K07387; metalloprotease [EC:3.4.24.-] D J5A55_11640 dihydrofolate reductase K01277 DPP3; dipeptidyl-peptidase III [EC:3.4.14.4] D J5A55_07155 rseP; RIP metalloprotease RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D J5A55_02865 trypsin-like peptidase domain-containing protein K04771 degP; serine protease Do [EC:3.4.21.107] D J5A55_11615 S9 family peptidase K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26] D J5A55_02785 S9 family peptidase K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5] D J5A55_11875 S9 family peptidase K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5] D J5A55_01575 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D J5A55_01095 clpP; ATP-dependent Clp endopeptidase proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D J5A55_04490 lon; endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D J5A55_08095 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D J5A55_00165 peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D J5A55_07510 S41 family peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D J5A55_07970 S41 family peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D J5A55_08745 S41 family peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D J5A55_04565 sppA; signal peptide peptidase SppA K04773 sppA; protease IV [EC:3.4.21.-] D J5A55_04010 Type 1 glutamine amidotransferase-like domain-containing protein K05995 pepE; dipeptidase E [EC:3.4.13.21] D J5A55_00695 rhomboid family intramembrane serine protease K07059 K07059; rhomboid family protein D J5A55_00090 U32 family peptidase K08303 prtC; U32 family peptidase [EC:3.4.-.-] D J5A55_04795 U32 family peptidase K24847 rlhA; 23S rRNA 5-hydroxycytidine C2501 synthase C 01003 Glycosyltransferases [BR:pvf01003] D J5A55_02110 polyprenol monophosphomannose synthase K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83] D J5A55_04595 glycosyltransferase family 4 protein K16150 K16150; glycogen synthase [EC:2.4.1.11] D J5A55_03795 glycogen/starch synthase K00703 glgA; starch synthase [EC:2.4.1.21] D J5A55_03595 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D J5A55_08925 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D J5A55_11900 transglycosylase domain-containing protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] C 01005 Lipopolysaccharide biosynthesis proteins [BR:pvf01005] D J5A55_08915 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D J5A55_01495 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D J5A55_08910 bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/3-hydroxyacyl-ACP dehydratase K16363 lpxC-fabZ; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:3.5.1.108 4.2.1.59] D J5A55_08905 lpxD; UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D J5A55_00935 UDP-2,3-diacylglucosamine diphosphatase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D J5A55_04570 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D J5A55_01780 lysophospholipid acyltransferase family protein K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D J5A55_01775 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D J5A55_03030 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D J5A55_01785 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D J5A55_03720 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D J5A55_03730 HAD-IIIA family hydrolase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D J5A55_03025 KpsF/GutQ family sugar-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D J5A55_01815 phosphoethanolamine transferase K19353 eptC; heptose-I-phosphate ethanolaminephosphotransferase [EC:2.7.8.-] D J5A55_02265 phosphoethanolamine transferase K19353 eptC; heptose-I-phosphate ethanolaminephosphotransferase [EC:2.7.8.-] D J5A55_07250 sulfatase-like hydrolase/transferase K19353 eptC; heptose-I-phosphate ethanolaminephosphotransferase [EC:2.7.8.-] D J5A55_08850 phosphoethanolamine transferase K19353 eptC; heptose-I-phosphate ethanolaminephosphotransferase [EC:2.7.8.-] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:pvf01011] D J5A55_07170 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D J5A55_02730 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D J5A55_07365 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D J5A55_07350 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D J5A55_07340 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D J5A55_05920 bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase/alanine racemase K01798 alr-murF; Alr-MurF fusion protein [EC:5.1.1.1 6.3.2.10] D J5A55_00630 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D J5A55_00215 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D J5A55_07345 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D J5A55_07360 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D J5A55_06015 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D J5A55_03935 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D J5A55_11660 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D J5A55_08925 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D J5A55_11900 transglycosylase domain-containing protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D J5A55_06290 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D J5A55_11895 penicillin-binding protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D J5A55_07335 transpeptidase family protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D J5A55_01575 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D J5A55_03595 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D J5A55_08000 M15 family metallopeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D J5A55_01470 lytic transglycosylase domain-containing protein K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29] D J5A55_04095 mltG; endolytic transglycosylase MltG K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D J5A55_06710 septal ring lytic transglycosylase RlpA family protein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D J5A55_05890 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] C 01004 Lipid biosynthesis proteins [BR:pvf01004] D J5A55_04220 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D J5A55_01310 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D J5A55_00015 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D J5A55_11800 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D J5A55_08910 bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/3-hydroxyacyl-ACP dehydratase K16363 lpxC-fabZ; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:3.5.1.108 4.2.1.59] D J5A55_00510 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D J5A55_00575 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D J5A55_03975 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D J5A55_02105 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins C 01006 Prenyltransferases [BR:pvf01006] D J5A55_10785 polyprenyl synthetase family protein K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D J5A55_08165 polyprenyl synthetase family protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D J5A55_00190 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D J5A55_04610 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D J5A55_08920 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D J5A55_05200 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] D J5A55_07235 decaprenyl-phosphate phosphoribosyltransferase K14136 K14136; decaprenyl-phosphate phosphoribosyltransferase [EC:2.4.2.45] C 01007 Amino acid related enzymes [BR:pvf01007] D J5A55_07025 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D J5A55_03770 glutamine--tRNA ligase/YqeY domain fusion protein K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D J5A55_00400 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D J5A55_07015 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D J5A55_00245 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D J5A55_00525 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D J5A55_00735 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D J5A55_08730 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D J5A55_11980 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D J5A55_08225 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D J5A55_01700 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D J5A55_12010 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D J5A55_01285 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D J5A55_12125 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D J5A55_01235 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D J5A55_09750 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D J5A55_09295 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D J5A55_02800 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D J5A55_01435 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D J5A55_02715 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D J5A55_11125 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D J5A55_03495 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D J5A55_06370 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D J5A55_00970 kbl; glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29] D J5A55_04475 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D J5A55_08675 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D J5A55_03340 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:pvf00194] D J5A55_09460 atpC; ATP synthase F1 subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D J5A55_09465 F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D J5A55_09425 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D J5A55_09430 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D J5A55_09435 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D J5A55_09440 atpF; F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D J5A55_09445 atpE; ATP synthase F0 subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D J5A55_09450 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:pvf03000] D J5A55_07800 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D J5A55_11430 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D J5A55_07415 AraC family transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA D J5A55_02470 helix-turn-helix domain-containing protein K13530 adaA; AraC family transcriptional regulator, regulatory protein of adaptative response / methylphosphotriester-DNA alkyltransferase methyltransferase [EC:2.1.1.-] D J5A55_00635 hydrogen peroxide-inducible genes activator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D J5A55_07550 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D J5A55_08805 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D J5A55_08035 Lrp/AsnC ligand binding domain-containing protein K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA D J5A55_09615 Lrp/AsnC family transcriptional regulator K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA D J5A55_09160 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator D J5A55_05915 transcriptional repressor K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D J5A55_12115 transcriptional repressor K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D J5A55_08845 transcriptional repressor K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator D J5A55_06205 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D J5A55_11080 4Fe-4S binding protein K21559 cprC; NosR/NirI family transcriptional regulator, putative reductive dehalogenation system regulator D J5A55_01480 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D J5A55_00990 arginine repressor K03402 argR; transcriptional regulator of arginine metabolism D J5A55_08725 TraR/DksA family transcriptional regulator K06204 dksA; RNA polymerase-binding transcription factor D J5A55_07320 mraZ; division/cell wall cluster transcriptional repressor MraZ K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:pvf03021] D J5A55_06725 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D J5A55_06910 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D J5A55_06905 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D J5A55_02860 sigma-70 family RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor D J5A55_03755 sigma-70 family RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor D J5A55_09335 RNA polymerase sigma factor RpoD/SigA K03086 rpoD; RNA polymerase primary sigma factor D J5A55_06225 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D J5A55_07750 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D J5A55_08240 rpoN; RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D J5A55_07500 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA D J5A55_01900 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB D J5A55_06935 nusG; transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG D J5A55_08725 TraR/DksA family transcriptional regulator K06204 dksA; RNA polymerase-binding transcription factor D J5A55_00430 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D J5A55_03605 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:pvf03019] D J5A55_04210 Rne/Rng family ribonuclease K08301 rng; ribonuclease G [EC:3.1.26.-] D J5A55_00020 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D J5A55_02380 MBL fold metallo-hydrolase K12574 rnj; ribonuclease J [EC:3.1.-.-] D J5A55_02980 rny; ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-] D J5A55_00065 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D J5A55_07895 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D J5A55_01085 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D J5A55_02570 RecQ family ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D J5A55_11000 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D J5A55_07810 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D J5A55_03605 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D J5A55_09470 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D J5A55_01165 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D J5A55_04545 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D J5A55_06055 HD domain-containing protein K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] C 03041 Spliceosome C 03011 Ribosome [BR:pvf03011] D J5A55_12190 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D J5A55_07670 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D J5A55_06830 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D J5A55_06730 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D J5A55_06775 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D J5A55_04245 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D J5A55_06875 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D J5A55_06790 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D J5A55_07675 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D J5A55_06865 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D J5A55_06735 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D J5A55_06880 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D J5A55_06740 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D J5A55_06795 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D J5A55_05990 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D J5A55_03705 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D J5A55_06815 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D J5A55_04240 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D J5A55_06840 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D J5A55_07400 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D J5A55_06985 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D J5A55_06925 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D J5A55_06845 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D J5A55_06860 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D J5A55_06855 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D J5A55_06800 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D J5A55_06785 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D J5A55_04235 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D J5A55_06920 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D J5A55_06930 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D J5A55_06915 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D J5A55_07680 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D J5A55_06810 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D J5A55_06765 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D J5A55_06825 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D J5A55_06720 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D J5A55_06780 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D J5A55_06395 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D J5A55_04840 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D J5A55_10675 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D J5A55_06835 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D J5A55_06850 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D J5A55_06805 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D J5A55_10670 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D J5A55_04030 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D J5A55_06820 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D J5A55_06770 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D J5A55_05245 type B 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D J5A55_01305 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D J5A55_04025 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D J5A55_00615 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D J5A55_04845 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D J5A55_06745 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D J5A55_01895 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25 D J5A55_00280 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D J5A55_08990 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D J5A55_00270 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D J5A55_01000 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:pvf03009] D J5A55_00020 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D J5A55_01315 era; GTPase Era K03595 era; GTPase D J5A55_06550 obgE; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-] D J5A55_08725 TraR/DksA family transcriptional regulator K06204 dksA; RNA polymerase-binding transcription factor D J5A55_07500 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA D J5A55_01900 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB D J5A55_06935 nusG; transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG D J5A55_01755 rsmA; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D J5A55_08790 RsmD family RNA methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D J5A55_12030 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D J5A55_03620 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D J5A55_07325 rsmH; 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D J5A55_06240 rsmI; 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D J5A55_03740 rlmH; 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D J5A55_09095 class I SAM-dependent rRNA methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D J5A55_11880 methyltransferase K25137 rlmL; 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.173] D J5A55_02405 rlmN; 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D J5A55_04925 rlmD; 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D J5A55_00765 RluA family pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D J5A55_01280 RNA-binding S4 domain-containing protein K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D J5A55_00625 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D J5A55_05485 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D J5A55_11795 RNA pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D J5A55_07165 rimM; 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM D J5A55_03645 rimO; 30S ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4] D J5A55_03875 prmA; 50S ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] D J5A55_04210 Rne/Rng family ribonuclease K08301 rng; ribonuclease G [EC:3.1.26.-] D J5A55_02815 ruvX; Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D J5A55_07895 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D J5A55_01740 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D J5A55_01320 der; ribosome biogenesis GTPase Der K03977 engA; GTPase D J5A55_05255 hflX; GTPase HflX K03665 hflX; GTPase D J5A55_04345 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D J5A55_01465 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D J5A55_03585 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D J5A55_00335 rbfA; 30S ribosome-binding factor RbfA K02834 rbfA; ribosome-binding factor A D J5A55_07505 rimP; ribosome assembly cofactor RimP K09748 rimP; ribosome maturation factor RimP D J5A55_01645 rsfS; ribosome silencing factor K09710 ybeB; ribosome-associated protein D J5A55_07940 ybeY; rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor D J5A55_06975 raiA; ribosome-associated translation inhibitor RaiA K05808 hpf; ribosome hibernation promoting factor D J5A55_00025 ychF; redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase D J5A55_01300 DUF177 domain-containing protein K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:pvf03016] D J5A55_11965 ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11] D J5A55_07025 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D J5A55_09295 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D J5A55_08730 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D J5A55_08225 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D J5A55_00735 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D J5A55_03770 glutamine--tRNA ligase/YqeY domain fusion protein K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D J5A55_00525 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D J5A55_01700 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D J5A55_12010 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D J5A55_01435 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D J5A55_01285 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D J5A55_01235 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D J5A55_02800 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D J5A55_09750 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D J5A55_00245 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D J5A55_11980 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D J5A55_12125 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D J5A55_02715 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D J5A55_11125 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D J5A55_00400 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D J5A55_07015 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D J5A55_08150 dtd; D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D J5A55_00435 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D J5A55_11275 trmB; tRNA (guanosine(46)-N7)-methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D J5A55_12065 tsaA; tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-] D J5A55_04105 truA; tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D J5A55_06010 truB; tRNA pseudouridine(55) synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D J5A55_01845 mnmA; tRNA 2-thiouridine(34) synthase MnmA K21027 TRMU; tRNA-5-taurinomethyluridine 2-sulfurtransferase [EC:2.8.1.14] D J5A55_04345 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D J5A55_04610 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D J5A55_08920 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D J5A55_09115 mnmE; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D J5A55_08135 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D J5A55_00390 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D J5A55_05950 ettA; energy-dependent translational throttle protein EttA K06020 ettA; energy-dependent translational throttle protein EttA D J5A55_06215 nucleoside deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D J5A55_08060 dusB; tRNA dihydrouridine synthase DusB K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D J5A55_00095 miaB; tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D J5A55_02745 mtaB; tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase MtaB K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5] D J5A55_02680 trmD; tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D J5A55_04485 methyltransferase K15460 yfiC; tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223] D J5A55_03510 RNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family D J5A55_00765 RluA family pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D J5A55_03930 S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D J5A55_06005 S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D J5A55_09735 queC; 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D J5A55_01965 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D J5A55_11590 queG; tRNA epoxyqueuosine(34) reductase QueG K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6] D J5A55_04495 tgt; tRNA guanosine(34) transglycosylase Tgt K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D J5A55_09100 tilS; tRNA lysidine(34) synthetase TilS K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D J5A55_07180 tsaB; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D J5A55_04040 tsaD; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D J5A55_06165 tsaE; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D J5A55_01010 tRNA threonylcarbamoyladenosine dehydratase K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase D J5A55_00065 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D J5A55_07810 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:pvf03012] D J5A55_07495 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D J5A55_04850 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D J5A55_04765 ABC-F family ATP-binding cassette domain-containing protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3 D J5A55_07665 elongation factor Ts K02357 tsf; elongation factor Ts D J5A55_06950 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D J5A55_04260 elongation factor G K02355 fusA; elongation factor G D J5A55_06870 fusA; elongation factor G K02355 fusA; elongation factor G D J5A55_03425 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D J5A55_01745 frr; ribosome recycling factor K02838 frr; ribosome recycling factor D J5A55_00815 prmC; peptide chain release factor N(5)-glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D J5A55_01890 aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D J5A55_06750 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D J5A55_00610 efp; elongation factor P K02356 efp; elongation factor P D J5A55_00580 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2 D J5A55_04370 peptide chain release factor 3 K02837 prfC; peptide chain release factor 3 C 03110 Chaperones and folding catalysts [BR:pvf03110] D J5A55_04900 clpB; ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D J5A55_03780 ATP-dependent Clp protease ATP-binding subunit K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC D J5A55_01090 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D J5A55_03590 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG D J5A55_01165 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D J5A55_04545 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D J5A55_05500 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D J5A55_11825 J domain-containing protein K05516 cbpA; curved DNA-binding protein D J5A55_02170 TerB family tellurite resistance protein K05801 djlA; DnaJ like chaperone protein D J5A55_05495 nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE D J5A55_01925 Hsp20/alpha crystallin family protein K13993 HSP20; HSP20 family protein D J5A55_01885 RNA-binding S4 domain-containing protein K04762 hslR; ribosome-associated heat shock protein Hsp15 D J5A55_04550 co-chaperone GroES K04078 groES; chaperonin GroES D J5A55_02865 trypsin-like peptidase domain-containing protein K04771 degP; serine protease Do [EC:3.4.21.107] D J5A55_01640 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D J5A55_09450 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D J5A55_05710 family 20 glycosylhydrolase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D J5A55_06135 family 20 glycosylhydrolase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D J5A55_09055 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D J5A55_09070 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D J5A55_04125 SurA N-terminal domain-containing protein K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8] D J5A55_08020 FKBP-type peptidyl-prolyl cis-trans isomerase K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8] D J5A55_02210 FKBP-type peptidyl-prolyl cis-trans isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8] D J5A55_01070 peptidylprolyl isomerase K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] D J5A55_01075 peptidylprolyl isomerase K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] D J5A55_06170 trxA; thioredoxin K03671 TXN; thioredoxin C 04131 Membrane trafficking [BR:pvf04131] D J5A55_04615 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D J5A55_05565 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D J5A55_03590 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG C 04121 Ubiquitin system C 03051 Proteasome [BR:pvf03051] D J5A55_03590 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG C 03032 DNA replication proteins [BR:pvf03032] D J5A55_00515 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D J5A55_10385 AAA family ATPase K10742 DNA2; DNA replication ATP-dependent helicase/nuclease Dna2 [EC:5.6.2.3 3.1.-.-] D J5A55_07800 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D J5A55_11430 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D J5A55_00690 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D J5A55_03650 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D J5A55_04205 integration host factor subunit beta K03530 hupB; DNA-binding protein HU-beta D J5A55_05880 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D J5A55_03715 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D J5A55_08695 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D J5A55_11305 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D J5A55_04440 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D J5A55_06175 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D J5A55_03145 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D J5A55_02180 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D J5A55_06270 DNA polymerase III subunit delta K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D J5A55_02585 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D J5A55_03150 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D J5A55_02075 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D J5A55_07460 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D J5A55_08170 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D J5A55_02655 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D J5A55_03315 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D J5A55_07405 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D J5A55_01240 DNA gyrase/topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D J5A55_07975 type IIA DNA topoisomerase subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D J5A55_07765 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D J5A55_08440 topoisomerase C-terminal repeat-containing protein K03169 topB; DNA topoisomerase III [EC:5.6.2.1] D J5A55_11020 DNA topoisomerase 3 K03169 topB; DNA topoisomerase III [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:pvf03036] D J5A55_07800 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D J5A55_11430 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D J5A55_00020 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D J5A55_00690 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D J5A55_03650 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D J5A55_04205 integration host factor subunit beta K03530 hupB; DNA-binding protein HU-beta D J5A55_11825 J domain-containing protein K05516 cbpA; curved DNA-binding protein D J5A55_05880 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D J5A55_01430 DNA starvation/stationary phase protection protein K04047 dps; starvation-inducible DNA-binding protein D J5A55_07375 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA D J5A55_02080 septum formation initiator family protein K13052 divIC; cell division protein DivIC D J5A55_10745 ATP-binding cassette domain-containing protein K09812 ftsE; cell division transport system ATP-binding protein D J5A55_07335 transpeptidase family protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D J5A55_09085 DNA translocase FtsK 4TM domain-containing protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D J5A55_07370 cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ D J5A55_07355 FtsW/RodA/SpoVE family cell cycle protein K03588 ftsW; cell division protein FtsW D J5A55_06025 permease-like cell division protein FtsX K09811 ftsX; cell division transport system permease protein D J5A55_07380 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D J5A55_05890 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D J5A55_06050 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D J5A55_08955 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D J5A55_06305 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D J5A55_06300 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC D J5A55_06285 rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA D J5A55_01485 ParA family protein K03496 parA; chromosome partitioning protein D J5A55_09695 ParA family protein K03496 parA; chromosome partitioning protein D J5A55_11535 ParA family protein K03496 parA; chromosome partitioning protein D J5A55_01480 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D J5A55_01240 DNA gyrase/topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D J5A55_07975 type IIA DNA topoisomerase subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D J5A55_08135 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D J5A55_03620 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D J5A55_06980 tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC D J5A55_00350 tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD D J5A55_08765 Mrp/NBP35 family ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D J5A55_01370 Fic family protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D J5A55_03530 YihA family ribosome biogenesis GTP-binding protein K03978 engB; GTP-binding protein C 03400 DNA repair and recombination proteins [BR:pvf03400] D J5A55_07890 methylated-DNA--[protein]-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D J5A55_07425 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D J5A55_06320 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D J5A55_04005 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D J5A55_05550 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D J5A55_00550 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D J5A55_02470 helix-turn-helix domain-containing protein K13530 adaA; AraC family transcriptional regulator, regulatory protein of adaptative response / methylphosphotriester-DNA alkyltransferase methyltransferase [EC:2.1.1.-] D J5A55_06085 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D J5A55_02575 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D J5A55_02655 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D J5A55_08170 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D J5A55_09275 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A D J5A55_10895 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A D J5A55_04995 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B D J5A55_08145 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C D J5A55_02600 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D J5A55_03600 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D J5A55_06910 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D J5A55_06905 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D J5A55_06725 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D J5A55_02025 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D J5A55_08280 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D J5A55_11400 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D J5A55_11750 endonuclease MutS2 K07456 mutS2; DNA mismatch repair protein MutS2 D J5A55_01055 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL D J5A55_08665 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D J5A55_08670 xseB; exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D J5A55_06175 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D J5A55_03145 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D J5A55_02180 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D J5A55_06270 DNA polymerase III subunit delta K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D J5A55_02585 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D J5A55_03150 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D J5A55_02075 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D J5A55_04440 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D J5A55_01410 recA; recombinase RecA K03553 recA; recombination protein RecA D J5A55_01395 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA D J5A55_07930 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D J5A55_03610 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D J5A55_07050 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D J5A55_11205 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms D J5A55_10765 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF D J5A55_07605 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D J5A55_07395 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D J5A55_09535 recR; recombination protein RecR K06187 recR; recombination protein RecR D J5A55_03165 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D J5A55_08650 cas1; type II CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1 D J5A55_03315 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D J5A55_07405 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D J5A55_07765 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D J5A55_00690 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D J5A55_03650 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D J5A55_04205 integration host factor subunit beta K03530 hupB; DNA-binding protein HU-beta D J5A55_01085 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D J5A55_02570 RecQ family ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D J5A55_05580 dinB; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D J5A55_00820 RecX family transcriptional regulator K03565 recX; regulatory protein D J5A55_00035 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D J5A55_05900 adenosylcobalamin-dependent ribonucleoside-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D J5A55_00040 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D J5A55_09250 DHH family phosphoesterase K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] C 03029 Mitochondrial biogenesis [BR:pvf03029] D J5A55_07495 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D J5A55_04850 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D J5A55_07665 elongation factor Ts K02357 tsf; elongation factor Ts D J5A55_06950 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D J5A55_04260 elongation factor G K02355 fusA; elongation factor G D J5A55_06870 fusA; elongation factor G K02355 fusA; elongation factor G D J5A55_01315 era; GTPase Era K03595 era; GTPase D J5A55_00400 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D J5A55_08225 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D J5A55_12010 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D J5A55_01235 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D J5A55_00525 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D J5A55_05250 DNA/RNA non-specific endonuclease K01173 ENDOG; endonuclease G, mitochondrial D J5A55_04440 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D J5A55_00195 outer membrane protein assembly factor K07277 SAM50; outer membrane protein insertion porin family D J5A55_01165 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D J5A55_05495 nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE D J5A55_04545 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D J5A55_04550 co-chaperone GroES K04078 groES; chaperonin GroES D J5A55_05500 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D J5A55_08765 Mrp/NBP35 family ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D J5A55_09040 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D J5A55_03590 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:pvf02000] D J5A55_00110 ABC transporter ATP-binding protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D J5A55_07585 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D J5A55_03525 ABC-F family ATP-binding cassette domain-containing protein K15738 uup; ABC transport system ATP-binding/permease protein D J5A55_11200 ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D J5A55_05885 MCE family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D J5A55_01350 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D J5A55_01355 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D J5A55_04325 ABC transporter substrate-binding protein K25034 btuF; cobalamin transport system substrate-binding protein D J5A55_04320 iron ABC transporter permease K25027 btuC; cobalamin transport system permease protein D J5A55_00725 ABC transporter ATP-binding protein K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8] D J5A55_06445 LptF/LptG family permease K07091 lptF; lipopolysaccharide export system permease protein D J5A55_04500 LptF/LptG family permease K11720 lptG; lipopolysaccharide export system permease protein D J5A55_01340 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D J5A55_02245 ABC transporter permease K25180 ybhR; drug efflux transport system permease protein D J5A55_02240 ABC transporter permease K25181 ybhS; drug efflux transport system permease protein D J5A55_02235 ABC transporter ATP-binding protein K25182 ybhF; drug efflux transport system ATP-binding protein D J5A55_02230 HlyD family efflux transporter periplasmic adaptor subunit K25183 ybhG; membrane fusion protein YbhG D J5A55_00330 ABC transporter permease K09808 lolC_E; lipoprotein-releasing system permease protein D J5A55_03490 ABC transporter permease K09808 lolC_E; lipoprotein-releasing system permease protein D J5A55_01020 ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D J5A55_06025 permease-like cell division protein FtsX K09811 ftsX; cell division transport system permease protein D J5A55_10745 ATP-binding cassette domain-containing protein K09812 ftsE; cell division transport system ATP-binding protein D J5A55_11235 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D J5A55_11240 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D J5A55_01605 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D J5A55_04160 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D J5A55_07480 sufC; Fe-S cluster assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein D J5A55_04330 SLC13/DASS family transporter K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5 D J5A55_01225 MATE family efflux transporter K26939 norM; MATE family, multidrug efflux pump D J5A55_12085 MATE family efflux transporter K26939 norM; MATE family, multidrug efflux pump D J5A55_02910 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump D J5A55_05970 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump D J5A55_02465 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump D J5A55_11920 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump D J5A55_05540 MFS transporter K02429 fucP; MFS transporter, FHS family, L-fucose permease D J5A55_12040 MFS transporter K11537 xapB; MFS transporter, NHS family, xanthosine permease D J5A55_02440 MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D J5A55_05320 MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D J5A55_06335 MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D J5A55_08130 MFS transporter K08223 fsr; MFS transporter, FSR family, fosmidomycin resistance protein D J5A55_06575 MIP family channel protein K06188 aqpZ; aquaporin Z D J5A55_01150 ion transporter K10716 kch; voltage-gated potassium channel D J5A55_03950 VWA domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog D J5A55_03955 VWA domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog D J5A55_04620 mscL; large-conductance mechanosensitive channel protein MscL K03282 mscL; large conductance mechanosensitive channel D J5A55_03080 mechanosensitive ion channel family protein K05802 mscK; potassium-dependent mechanosensitive channel D J5A55_01570 mechanosensitive ion channel K16053 ybdG; miniconductance mechanosensitive channel D J5A55_07130 OmpA family protein K02557 motB; chemotaxis protein MotB D J5A55_06365 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB D J5A55_09595 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB D J5A55_01655 magnesium transporter CorA family protein K03284 corA; magnesium transporter D J5A55_11830 crcB; fluoride efflux transporter CrcB K06199 crcB; fluoride exporter D J5A55_04130 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family D J5A55_04435 gldE; gliding motility-associated protein GldE K03699 tlyC; magnesium and cobalt exporter, CNNM family D J5A55_10700 ATPase K07221 oprO_P; phosphate-selective porin OprO and OprP D J5A55_09805 TonB-dependent receptor K16091 fecA; Fe(3+) dicitrate transport protein D J5A55_06130 TonB-dependent receptor K16092 btuB; vitamin B12 transporter D J5A55_07545 TonB-dependent receptor K21573 susC; TonB-dependent starch-binding outer membrane protein SusC D J5A55_00410 TonB-dependent receptor K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins D J5A55_06625 TonB-dependent receptor K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins D J5A55_01460 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D J5A55_05865 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D J5A55_06400 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D J5A55_07820 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D J5A55_06040 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system D J5A55_11165 polysaccharide biosynthesis/export family protein K01991 wza; polysaccharide biosynthesis/export protein D J5A55_00195 outer membrane protein assembly factor K07277 SAM50; outer membrane protein insertion porin family D J5A55_04990 bamD; outer membrane protein assembly factor BamD K05807 bamD; outer membrane protein assembly factor BamD D J5A55_04135 lptC; LPS export ABC transporter periplasmic protein LptC K11719 lptC; lipopolysaccharide export system protein LptC D J5A55_08775 CidA/LrgA family protein K06518 cidA; holin-like protein D J5A55_07555 SLC45 family MFS transporter K16211 malY; maltose/moltooligosaccharide transporter D J5A55_01950 calcium/sodium antiporter K07301 yrbG; cation:H+ antiporter D J5A55_02030 cation:proton antiporter K26735 KEA4_5_6; K+:H+ antiporter D J5A55_01025 cation:proton antiporter K26730 napA; Na+:H+ antiporter D J5A55_01205 TrkH family potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein D J5A55_01210 trkA; Trk system potassium transporter TrkA K03499 trkA; trk/ktr system potassium uptake protein D J5A55_04275 uracil-xanthine permease K02824 uraA; uracil permease D J5A55_06120 purine permease K16345 xanP; xanthine permease XanP D J5A55_04525 NCS2 family permease K06901 pbuG; adenine/guanine/hypoxanthine permease D J5A55_04340 chloride channel protein K03281 clcA; chloride channel protein, CIC family D J5A55_03775 Nramp family divalent metal transporter K03322 mntH; manganese transport protein D J5A55_00235 Na/Pi cotransporter family protein K03324 yjbB; phosphate:Na+ symporter D J5A55_00740 KUP/HAK/KT family potassium transporter K03549 kup; KUP system potassium uptake protein D J5A55_01960 queuosine precursor transporter K09125 yhhQ; queuosine precursor transporter D J5A55_07355 FtsW/RodA/SpoVE family cell cycle protein K03588 ftsW; cell division protein FtsW D J5A55_02370 TonB family protein K03832 tonB; periplasmic protein TonB D J5A55_06350 energy transducer TonB K03832 tonB; periplasmic protein TonB D J5A55_07440 energy transducer TonB K03832 tonB; periplasmic protein TonB D J5A55_10780 TonB family protein K03832 tonB; periplasmic protein TonB D J5A55_03820 acyl-CoA carboxylase subunit beta K01604 mmdA; methylmalonyl-CoA decarboxylase subunit alpha [EC:7.2.4.3] D J5A55_03810 biotin/lipoyl-binding protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma D J5A55_06050 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D J5A55_08955 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D J5A55_02955 polysaccharide biosynthesis tyrosine autokinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3] D J5A55_00905 RagB/SusD family nutrient uptake outer membrane protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family D J5A55_01110 RagB/SusD family nutrient uptake outer membrane protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family D J5A55_01625 RagB/SusD family nutrient uptake outer membrane protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family D J5A55_02310 RagB/SusD family nutrient uptake outer membrane protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family D J5A55_07540 RagB/SusD family nutrient uptake outer membrane protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family D J5A55_07700 RagB/SusD family nutrient uptake outer membrane protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family D J5A55_08300 RagB/SusD family nutrient uptake outer membrane protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family D J5A55_08825 RagB/SusD family nutrient uptake outer membrane protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family D J5A55_10900 RagB/SusD family nutrient uptake outer membrane protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family D J5A55_10940 RagB/SusD family nutrient uptake outer membrane protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family D J5A55_09795 RagB/SusD family nutrient uptake outer membrane protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family D J5A55_05870 nicotinamide mononucleotide transporter K03811 pnuC; nicotinamide mononucleotide transporter D J5A55_09000 feoB; ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B D J5A55_02290 MgtC/SapB family protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein C 02044 Secretion system [BR:pvf02044] D J5A55_08750 dCMP deaminase family protein K01493 comEB; dCMP deaminase [EC:3.5.4.12] D J5A55_04110 ComEC/Rec2 family competence protein K02238 comEC; competence protein ComEC D J5A55_04155 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D J5A55_07640 hypothetical protein K03072 secD; preprotein translocase subunit SecD D J5A55_00705 secDF; protein translocase subunit SecDF K12257 secDF; SecD/SecF fusion protein D J5A55_06940 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D J5A55_02320 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D J5A55_06760 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D J5A55_02525 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D J5A55_03640 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D J5A55_01905 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D J5A55_09040 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase C 02042 Bacterial toxins [BR:pvf02042] D J5A55_04130 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family D J5A55_04435 gldE; gliding motility-associated protein GldE K03699 tlyC; magnesium and cobalt exporter, CNNM family D J5A55_08125 beta-N-acetylglucosaminidase domain-containing protein K01197 hya; hyaluronoglucosaminidase [EC:3.2.1.35] C 02022 Two-component system [BR:pvf02022] D J5A55_04255 HAMP domain-containing histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] C 02035 Bacterial motility proteins [BR:pvf02035] D J5A55_07130 OmpA family protein K02557 motB; chemotaxis protein MotB C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:pvf04812] D J5A55_06305 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D J5A55_07380 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D J5A55_07375 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA D J5A55_01485 ParA family protein K03496 parA; chromosome partitioning protein D J5A55_09695 ParA family protein K03496 parA; chromosome partitioning protein D J5A55_11535 ParA family protein K03496 parA; chromosome partitioning protein D J5A55_01480 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:pvf04147] D J5A55_03590 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG D J5A55_11000 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D J5A55_04615 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D J5A55_09730 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D J5A55_05565 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D J5A55_04545 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D J5A55_01165 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D J5A55_01710 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D J5A55_02785 S9 family peptidase K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5] D J5A55_11875 S9 family peptidase K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5] D J5A55_01080 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D J5A55_06950 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D J5A55_00435 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D J5A55_00575 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D J5A55_03975 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D J5A55_06555 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D J5A55_08140 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D J5A55_05315 alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51] D J5A55_09065 alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51] D J5A55_05545 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D J5A55_04190 alpha amylase C-terminal domain-containing protein K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D J5A55_02280 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D J5A55_07305 glutamine synthetase III K01915 glnA; glutamine synthetase [EC:6.3.1.2] D J5A55_03345 3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D J5A55_06380 phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D J5A55_11105 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D J5A55_01520 electron transfer flavoprotein subunit alpha/FixB family protein K03522 fixB; electron transfer flavoprotein alpha subunit C 02048 Prokaryotic defense system [BR:pvf02048] D J5A55_08650 cas1; type II CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1 D J5A55_08645 cas2; CRISPR-associated endonuclease Cas2 K09951 cas2; CRISPR-associated protein Cas2 D J5A55_05085 hypothetical protein K19126 casE; CRISPR system Cascade subunit CasE D J5A55_08655 type II CRISPR RNA-guided endonuclease Cas9 K09952 csn1; CRISPR-associated endonuclease Csn1 [EC:3.1.-.-] D J5A55_10530 DEAD/DEAH box helicase family protein K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D J5A55_10500 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D J5A55_10505 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D J5A55_10525 SAM-dependent DNA methyltransferase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D J5A55_07800 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D J5A55_11430 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D J5A55_04830 type II toxin-antitoxin system YafQ family toxin K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-] D J5A55_12245 type II toxin-antitoxin system YafQ family toxin K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-] D J5A55_01975 HipA domain-containing protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D J5A55_10515 Fic family protein K07341 doc; death on curing protein D J5A55_07380 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D J5A55_06305 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D J5A55_01240 DNA gyrase/topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D J5A55_07975 type IIA DNA topoisomerase subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D J5A55_07025 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules [BR:pvf04090] D J5A55_02785 S9 family peptidase K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5] D J5A55_11875 S9 family peptidase K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5] C 01504 Antimicrobial resistance genes [BR:pvf01504] D J5A55_08000 M15 family metallopeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D J5A55_06050 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D J5A55_08955 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D J5A55_06040 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins [BR:pvf00536] D J5A55_08125 beta-N-acetylglucosaminidase domain-containing protein K01197 hya; hyaluronoglucosaminidase [EC:3.2.1.35] C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:pvf00537] D J5A55_08125 beta-N-acetylglucosaminidase domain-containing protein K01197 hya; hyaluronoglucosaminidase [EC:3.2.1.35] C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:pvf03100] D J5A55_07115 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D J5A55_08980 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D J5A55_09650 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D J5A55_03175 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D J5A55_02120 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D J5A55_09555 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D J5A55_09560 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D J5A55_01820 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D J5A55_04450 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D J5A55_04465 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D J5A55_06960 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D J5A55_02315 tRNA-His K14226 tRNA-His; tRNA His D J5A55_07120 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D J5A55_08985 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D J5A55_04455 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D J5A55_00445 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D J5A55_11565 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D J5A55_09235 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D J5A55_09240 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D J5A55_01825 tRNA-Ile K14230 tRNA-Met; tRNA Met D J5A55_04585 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D J5A55_04470 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D J5A55_06970 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D J5A55_09380 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D J5A55_09225 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D J5A55_01265 tRNA-Val K14237 tRNA-Val; tRNA Val D J5A55_01270 tRNA-Val K14237 tRNA-Val; tRNA Val D J5A55_04530 tRNA-Val K14237 tRNA-Val; tRNA Val D J5A55_08990 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D J5A55_00270 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D J5A55_01000 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D J5A55_00280 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D J5A55_01930 choice-of-anchor J domain-containing protein K15509 hpsN; sulfopropanediol 3-dehydrogenase [EC:1.1.1.308] D J5A55_05780 aldo/keto reductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346] D J5A55_01420 saccharopine dehydrogenase family protein K27502 capadh; carboxyaminopropylagmatine dehydrogenase [EC:1.5.1.55] D J5A55_10995 bifunctional methionine sulfoxide reductase B/A protein K12267 msrAB; peptide methionine sulfoxide reductase msrA/msrB [EC:1.8.4.11 1.8.4.12] D J5A55_07290 bcp; thioredoxin-dependent thiol peroxidase K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D J5A55_00640 ahpC; peroxiredoxin K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26] D J5A55_07520 DNA topoisomerase II K05919 dfx; superoxide reductase [EC:1.15.1.2] D J5A55_08680 ferritin K02217 ftnA; ferritin [EC:1.16.3.2] D J5A55_11030 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4] D J5A55_02770 radical SAM protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D J5A55_02725 sugar O-acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79] D J5A55_08615 glycoside hydrolase family 130 protein K16212 mgp; 4-O-beta-D-mannosyl-D-glucose phosphorylase [EC:2.4.1.281] D J5A55_05720 glycoside hydrolase family 130 protein K18785 mp2; beta-1,4-mannooligosaccharide/beta-1,4-mannosyl-N-acetylglucosamine phosphorylase [EC:2.4.1.319 2.4.1.320] D J5A55_00030 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D J5A55_09410 FAD:protein FMN transferase K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D J5A55_00915 cdaA; diadenylate cyclase CdaA K18672 dacA; diadenylate cyclase [EC:2.7.7.85] D J5A55_08315 9-O-acetylesterase K05970 SIAE; sialate O-acetylesterase [EC:3.1.1.53] D J5A55_12225 sialate O-acetylesterase K05970 SIAE; sialate O-acetylesterase [EC:3.1.1.53] D J5A55_08080 acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D J5A55_07030 HDIG domain-containing protein K07037 pgpH; cyclic-di-AMP phosphodiesterase PgpH [EC:3.1.4.-] D J5A55_10790 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D J5A55_08400 lysozyme K01185 E3.2.1.17; lysozyme [EC:3.2.1.17] D J5A55_09935 lysozyme K01185 E3.2.1.17; lysozyme [EC:3.2.1.17] D J5A55_10280 lysozyme K01185 E3.2.1.17; lysozyme [EC:3.2.1.17] D J5A55_07570 glycoside hydrolase family 13 protein K21575 susA; neopullulanase [EC:3.2.1.135] D J5A55_02810 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D J5A55_11595 polysaccharide deacetylase family protein K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104] D J5A55_06385 RidA family protein K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10] D J5A55_03970 AAA family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D J5A55_06650 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D J5A55_06565 bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D J5A55_08625 AGE family epimerase/isomerase K16213 cbe; cellobiose epimerase [EC:5.1.3.11] D J5A55_01230 FKBP-type peptidyl-prolyl cis-trans isomerase K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8] D J5A55_12180 Na(+)-translocating NADH-quinone reductase subunit A K00346 nqrA; Na+-transporting NADH:ubiquinone oxidoreductase subunit A [EC:7.2.1.1] D J5A55_12175 NADH:ubiquinone reductase (Na(+)-transporting) subunit B K00347 nqrB; Na+-transporting NADH:ubiquinone oxidoreductase subunit B [EC:7.2.1.1] D J5A55_12170 nqrC; NADH:ubiquinone reductase (Na(+)-transporting) subunit C K00348 nqrC; Na+-transporting NADH:ubiquinone oxidoreductase subunit C [EC:7.2.1.1] D J5A55_12165 NADH:ubiquinone reductase (Na(+)-transporting) subunit D K00349 nqrD; Na+-transporting NADH:ubiquinone oxidoreductase subunit D [EC:7.2.1.1] D J5A55_12160 nqrE; NADH:ubiquinone reductase (Na(+)-transporting) subunit E K00350 nqrE; Na+-transporting NADH:ubiquinone oxidoreductase subunit E [EC:7.2.1.1] D J5A55_12155 nqrF; NADH:ubiquinone reductase (Na(+)-transporting) subunit F K00351 nqrF; Na+-transporting NADH:ubiquinone oxidoreductase subunit F [EC:7.2.1.1] D J5A55_02480 HAD-IC family P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9] D J5A55_01855 calcium-translocating P-type ATPase, PMCA-type K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10] D J5A55_08055 cadA; cadmium-translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21] C 99981 Carbohydrate metabolism D J5A55_11015 (Fe-S)-binding protein K18928 lldE; L-lactate dehydrogenase complex protein LldE D J5A55_11010 lactate utilization protein K18929 lldF; L-lactate dehydrogenase complex protein LldF D J5A55_11005 LUD domain-containing protein K00782 lldG; L-lactate dehydrogenase complex protein LldG C 99982 Energy metabolism D J5A55_02255 fldA; flavodoxin FldA K03839 fldA; flavodoxin I D J5A55_01515 electron transfer flavoprotein subunit beta/FixA family protein K03521 fixA; electron transfer flavoprotein beta subunit C 99983 Lipid metabolism C 99984 Nucleotide metabolism C 99985 Amino acid metabolism D J5A55_03505 YggS family pyridoxal phosphate-dependent enzyme K06997 yggS; PLP dependent protein C 99986 Glycan metabolism D J5A55_01760 flippase-like domain-containing protein K07027 K07027; glycosyltransferase 2 family protein C 99987 Cofactor metabolism C 99988 Secondary metabolism C 99999 Others B B 09192 Unclassified: genetic information processing C 99973 Transcription C 99974 Translation C 99975 Protein processing D J5A55_01100 tig; trigger factor K03545 tig; trigger factor D J5A55_03675 smpB; SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein D J5A55_00855 YifB family Mg chelatase-like AAA ATPase K07391 comM; magnesium chelatase family protein C 99976 Replication and repair D J5A55_02420 MGMT family protein K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein D J5A55_00950 radC; DNA repair protein RadC K03630 radC; DNA repair protein RadC D J5A55_05925 rmuC; DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC D J5A55_06210 YraN family protein K07460 yraN; putative endonuclease D J5A55_08075 dprA; DNA-processing protein DprA K04096 smf; DNA processing protein D J5A55_09670 replication-associated recombination protein A K07478 ycaJ; putative ATPase D J5A55_04375 transposase K07491 rayT; REP-associated tyrosine transposase C 99979 Viral proteins C 99998 Others B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D J5A55_08620 MFS transporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family D J5A55_06045 efflux RND transporter permease subunit K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family D J5A55_08950 efflux RND transporter permease subunit K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family D J5A55_10875 peptide MFS transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family D J5A55_00600 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family D J5A55_03985 transporter K03453 TC.BASS; bile acid:Na+ symporter, BASS family D J5A55_09375 putative transporter K07085 K07085; putative transport protein D J5A55_00720 putative transporter K07085 K07085; putative transport protein C 99978 Cell growth D J5A55_01940 hemerythrin domain-containing protein K07322 ytfE; regulator of cell morphogenesis and NO signaling D J5A55_00565 peptidoglycan DD-metalloendopeptidase family protein K22719 envC; murein hydrolase activator C 99993 Cell motility C 99995 Signaling proteins D J5A55_05985 typA; translational GTPase TypA K06207 typA; GTP-binding protein D J5A55_03455 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins C 99992 Structural proteins D J5A55_00205 OmpH family outer membrane protein K06142 hlpA; outer membrane protein D J5A55_00210 OmpH family outer membrane protein K06142 hlpA; outer membrane protein D J5A55_03700 OmpH family outer membrane protein K06142 hlpA; outer membrane protein D J5A55_00200 OmpH family outer membrane protein K06142 hlpA; outer membrane protein D J5A55_03870 glycoside hydrolase family 25 protein K07273 acm; lysozyme D J5A55_09815 glycosyl hydrolase family 25 K07273 acm; lysozyme D J5A55_11220 glycoside hydrolase family 25 protein K07273 acm; lysozyme D J5A55_11890 glycoside hydrolase family 25 protein K07273 acm; lysozyme D J5A55_11245 efflux RND transporter periplasmic adaptor subunit K01993 ABC-2.TX; HlyD family secretion protein D J5A55_07530 SusF/SusE family outer membrane protein K21571 susE_F; starch-binding outer membrane protein SusE/F D J5A55_07535 SusF/SusE family outer membrane protein K21571 susE_F; starch-binding outer membrane protein SusE/F C 99994 Others D J5A55_01405 copper homeostasis protein CutC K06201 cutC; copper homeostasis protein B B 09194 Poorly characterized C 99996 General function prediction only D J5A55_05415 Gfo/Idh/MocA family oxidoreductase K03810 mviM; virulence factor D J5A55_09280 HAD family hydrolase K07025 K07025; putative hydrolase of the HAD superfamily D J5A55_11655 HAD family hydrolase K07025 K07025; putative hydrolase of the HAD superfamily D J5A55_07490 sufB; Fe-S cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB D J5A55_07475 sufD; Fe-S cluster assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD D J5A55_00085 SufE family protein K02426 sufE; cysteine desulfuration protein SufE D J5A55_00155 LemA family protein K03744 lemA; LemA protein D J5A55_11135 YdcF family protein K03748 sanA; SanA protein D J5A55_12145 YkgB family protein K21741 rclC; reactive chlorine resistance protein C C 99997 Function unknown D J5A55_07740 anaerobic sulfatase-maturation protein K06871 K06871; uncharacterized protein D J5A55_00250 alpha/beta hydrolase K06889 K06889; uncharacterized protein D J5A55_00985 Bax inhibitor-1/YccA family protein K06890 K06890; uncharacterized protein D J5A55_11290 ATP-binding protein K06921 K06921; uncharacterized protein D J5A55_07385 ATP-binding protein K06926 K06926; uncharacterized protein D J5A55_02000 HDIG domain-containing protein K06950 K06950; uncharacterized protein D J5A55_05205 HD domain-containing protein K06950 K06950; uncharacterized protein D J5A55_00540 esterase K07000 K07000; uncharacterized protein D J5A55_09625 pyridoxamine 5'-phosphate oxidase family protein K07005 K07005; uncharacterized protein D J5A55_02635 nucleotidyltransferase domain-containing protein K07075 K07075; uncharacterized protein D J5A55_06890 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein D J5A55_08065 yfcE; phosphodiesterase K07095 K07095; uncharacterized protein D J5A55_11930 metallophosphoesterase family protein K07095 K07095; uncharacterized protein D J5A55_02100 metallophosphoesterase K07098 K07098; uncharacterized protein D J5A55_04950 ATP-binding protein K07133 K07133; uncharacterized protein D J5A55_06420 ATP-binding protein K07133 K07133; uncharacterized protein D J5A55_08275 ATP-binding protein K07133 K07133; uncharacterized protein D J5A55_10420 ATP-binding protein K07133 K07133; uncharacterized protein D J5A55_11075 FAD-binding protein K07137 K07137; uncharacterized protein D J5A55_02790 TIGR01212 family radical SAM protein K07139 K07139; uncharacterized protein D J5A55_02145 hypothetical protein K07164 K07164; uncharacterized protein D J5A55_00395 yidD; membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein D J5A55_12035 bifunctional nuclease family protein K08999 K08999; uncharacterized protein D J5A55_08735 DUF438 domain-containing protein K09155 K09155; uncharacterized protein D J5A55_11960 glycoside hydrolase family 125 protein K09704 K09704; uncharacterized protein D J5A55_03430 hypothetical protein K09805 K09805; uncharacterized protein D J5A55_01015 GntR family transcriptional regulator K00243 K00243; uncharacterized protein D J5A55_11610 YaaA family protein K09861 K09861; uncharacterized protein D J5A55_00520 DUF2059 domain-containing protein K09924 K09924; uncharacterized protein D J5A55_00920 GNAT family N-acetyltransferase K01163 K01163; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 1, 2024