+E
#<h2><a href="/kegg/brite.html"><img src="/Fig/bget/kegg3.gif" align="middle" border=0></a>&nbsp; Transcription Machinery - Pyrus x bretschneideri (Chinese white pear)</h2>
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A<b>Eukaryotic type</b>
B  RNA polymerase II system
C    RNA polymerase II
D      Core subunits
E        103929581 DNA-directed RNA polymerase II subunit 1-like	K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6] 
E        103936696 DNA-directed RNA polymerase II subunit 1	K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6] 
E        103953433 DNA-directed RNA polymerase II subunit 1-like	K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6] 
E        103944215 DNA-directed RNA polymerase II subunit RPB2	K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6] 
E        103931470 DNA-directed RNA polymerase II subunit RPB2-like	K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6] 
E        103927786 DNA-directed RNA polymerases II, IV and V subunit 3-like	K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3 
E        103942049 DNA-directed RNA polymerases II, IV and V subunit 3-like	K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3 
E        103964138 DNA-directed RNA polymerases II, IV and V subunit 11	K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11 
D      Pol II specific subunits
E        103950539 DNA-directed RNA polymerase II subunit 4-like	K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4 
E        103945824 DNA-directed RNA polymerases IV and V subunit 4-like isoform X1	K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4 
E        103946896 DNA-directed RNA polymerase II subunit 4-like	K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4 
E        103928956 DNA-directed RNA polymerase II subunit 4	K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4 
E        103963707 DNA-directed RNA polymerases IV and V subunit 4	K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4 
E        103946851 DNA-directed RNA polymerase II subunit RPB7	K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7 
E        103959317 DNA-directed RNA polymerases II, IV and V subunit 9A	K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9 
D      Pol I, II, III common subunits
E        103944004 DNA-directed RNA polymerases II and IV subunit 5A-like	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        103951867 DNA-directed RNA polymerases II and IV subunit 5A-like isoform X1	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        103952158 DNA-directed RNA polymerase V subunit 5C	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        103937885 DNA-directed RNA polymerase V subunit 5A-like	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        103929708 DNA-directed RNA polymerases II and IV subunit 5A-like isoform X1	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        103932172 DNA-directed RNA polymerase V subunit 5A-like	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        103947899 DNA-directed RNA polymerases II and V subunit 6B-like	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        103945450 DNA-directed RNA polymerases II, IV and V subunit 6A-like	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        103934995 DNA-directed RNA polymerases II, IV and V subunit 6A-like	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        103956263 DNA-directed RNA polymerases II, IV and V subunit 6A-like	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        103940532 DNA-directed RNA polymerases II and V subunit 8A-like	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        103934091 DNA-directed RNA polymerases II and V subunit 8A-like	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        103955918 DNA-directed RNA polymerases II and V subunit 8A-like	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        103959268 DNA-directed RNA polymerases II and V subunit 8A-like	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        103946511 DNA-directed RNA polymerases II, IV and V subunit 12-like	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
E        103968024 DNA-directed RNA polymerases II, IV and V subunit 12-like	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
E        103940796 DNA-directed RNA polymerase subunit 10-like protein	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
E        103957831 DNA-directed RNA polymerase subunit 10-like protein	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
E        103956120 DNA-directed RNA polymerase subunit 10-like protein	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
D      Pol IV and V specific subunits
E        103966471 DNA-directed RNA polymerase IV subunit 1	K16250 NRPD1; DNA-directed RNA polymerase IV subunit 1 [EC:2.7.7.6] 
E        103952138 DNA-directed RNA polymerase V subunit 1	K16251 NRPE1; DNA-directed RNA polymerase V subunit 1 [EC:2.7.7.6] 
E        103938971 DNA-directed RNA polymerases IV and V subunit 2-like	K16252 NRPD2; DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6] 
E        103953611 DNA-directed RNA polymerases IV and V subunit 2-like	K16252 NRPD2; DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6] 
E        103940943 DNA-directed RNA polymerase V subunit 7-like	K16253 NRPD7; DNA-directed RNA polymerase IV and V subunit 7 
E        103938162 DNA-directed RNA polymerase V subunit 7-like	K16253 NRPD7; DNA-directed RNA polymerase IV and V subunit 7 
E        103938163 DNA-directed RNA polymerase V subunit 7-like	K16253 NRPD7; DNA-directed RNA polymerase IV and V subunit 7 
E        103940944 DNA-directed RNA polymerase V subunit 7-like	K16253 NRPD7; DNA-directed RNA polymerase IV and V subunit 7 
C    Basal transcription factors
D      TFIIA
E        103954266 transcription initiation factor IIA large subunit-like isoform X1	K03122 TFIIA1; transcription initiation factor TFIIA large subunit 
E        103964701 transcription initiation factor IIA large subunit	K03122 TFIIA1; transcription initiation factor TFIIA large subunit 
D      TFIIB
E        103946495 transcription initiation factor IIB-2	K03124 TFIIB; transcription initiation factor TFIIB 
E        103958783 transcription initiation factor IIB-like	K03124 TFIIB; transcription initiation factor TFIIB 
E        103960808 plant-specific TFIIB-related protein 1	K03124 TFIIB; transcription initiation factor TFIIB 
E        103955692 transcription initiation factor IIB-2-like	K03124 TFIIB; transcription initiation factor TFIIB 
E        103955694 transcription initiation factor IIB-2-like	K03124 TFIIB; transcription initiation factor TFIIB 
E        103955755 transcription initiation factor IIB-like	K03124 TFIIB; transcription initiation factor TFIIB 
E        103955757 transcription initiation factor IIB-2-like	K03124 TFIIB; transcription initiation factor TFIIB 
E        103955776 transcription initiation factor IIB-like	K03124 TFIIB; transcription initiation factor TFIIB 
E        103955787 transcription initiation factor IIB-like	K03124 TFIIB; transcription initiation factor TFIIB 
D      TFIID
E        103944416 TATA-box-binding protein 1	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        103931445 TATA-box-binding protein-like	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        103930165 TATA-box-binding protein 2-like	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        103956208 TATA-box-binding protein 1-like	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        103957716 transcription initiation factor TFIID subunit 1-like	K03125 TAF1; transcription initiation factor TFIID subunit 1 [EC:2.3.1.48 2.7.11.1] 
E        103957722 transcription initiation factor TFIID subunit 1-like	K03125 TAF1; transcription initiation factor TFIID subunit 1 [EC:2.3.1.48 2.7.11.1] 
E        103938476 transcription initiation factor TFIID subunit 2 isoform X1	K03128 TAF2; transcription initiation factor TFIID subunit 2 
E        103961745 transcription initiation factor TFIID subunit 4b isoform X1	K03129 TAF4; transcription initiation factor TFIID subunit 4 
E        103953704 LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 5	K03130 TAF5; transcription initiation factor TFIID subunit 5 
E        103951428 transcription initiation factor TFIID subunit 6-like	K03131 TAF6; transcription initiation factor TFIID subunit 6 
E        103955030 transcription initiation factor TFIID subunit 6-like isoform X1	K03131 TAF6; transcription initiation factor TFIID subunit 6 
E        103954044 transcription initiation factor TFIID subunit 7-like	K03132 TAF7; transcription initiation factor TFIID subunit 7 
E        103964509 transcription initiation factor TFIID subunit 7-like	K03132 TAF7; transcription initiation factor TFIID subunit 7 
E        103945229 transcription initiation factor TFIID subunit 8-like	K14649 TAF8; transcription initiation factor TFIID subunit 8 
E        103941948 transcription initiation factor TFIID subunit 8-like	K14649 TAF8; transcription initiation factor TFIID subunit 8 
E        103948086 transcription initiation factor TFIID subunit 8-like	K14649 TAF8; transcription initiation factor TFIID subunit 8 
E        103927462 transcription initiation factor TFIID subunit 8-like	K14649 TAF8; transcription initiation factor TFIID subunit 8 
E        103965482 transcription initiation factor TFIID subunit 8-like	K14649 TAF8; transcription initiation factor TFIID subunit 8 
E        103955715 transcription initiation factor TFIID subunit 8-like	K14649 TAF8; transcription initiation factor TFIID subunit 8 
E        103955734 transcription initiation factor TFIID subunit 8-like	K14649 TAF8; transcription initiation factor TFIID subunit 8 
E        103967425 uncharacterized protein LOC103967425	K14649 TAF8; transcription initiation factor TFIID subunit 8 
E        103964275 transcription initiation factor TFIID subunit 9	K03133 TAF9B; transcription initiation factor TFIID subunit 9B 
E        103953133 transcription initiation factor TFIID subunit 10-like isoform X5	K03134 TAF10; transcription initiation factor TFIID subunit 10 
E        103949675 transcription initiation factor TFIID subunit 10	K03134 TAF10; transcription initiation factor TFIID subunit 10 
E        103958079 transcription initiation factor TFIID subunit 11	K03135 TAF11; transcription initiation factor TFIID subunit 11 
E        103931992 transcription initiation factor TFIID subunit 12b-like	K03126 TAF12; transcription initiation factor TFIID subunit 12 
E        103961517 transcription initiation factor TFIID subunit 12b-like	K03126 TAF12; transcription initiation factor TFIID subunit 12 
E        103956400 transcription initiation factor TFIID subunit 12 isoform X1	K03126 TAF12; transcription initiation factor TFIID subunit 12 
E        103963633 transcription initiation factor TFIID subunit 12-like isoform X1	K03126 TAF12; transcription initiation factor TFIID subunit 12 
D      TFIIE
E        103929905 general transcription factor IIE subunit 1-like	K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha 
E        103938461 general transcription factor IIE subunit 1-like	K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha 
E        103964565 transcription initiation factor IIE subunit beta-like	K03137 TFIIE2; transcription initiation factor TFIIE subunit beta 
E        103958493 transcription initiation factor IIE subunit beta-like	K03137 TFIIE2; transcription initiation factor TFIIE subunit beta 
D      TFIIF
E        103942773 transcription initiation factor IIF subunit alpha-like	K03138 TFIIF1; transcription initiation factor TFIIF subunit alpha 
E        103948257 transcription initiation factor IIF subunit alpha-like	K03138 TFIIF1; transcription initiation factor TFIIF subunit alpha 
E        103945601 transcription initiation factor IIF subunit alpha	K03138 TFIIF1; transcription initiation factor TFIIF subunit alpha 
E        103926636 general transcription factor IIF subunit 2-like	K03139 TFIIF2; transcription initiation factor TFIIF subunit beta [EC:5.6.2.-] 
E        103942923 transcription initiation factor IIF subunit beta-like	K03139 TFIIF2; transcription initiation factor TFIIF subunit beta [EC:5.6.2.-] 
E        103928326 transcription initiation factor IIF subunit beta	K03139 TFIIF2; transcription initiation factor TFIIF subunit beta [EC:5.6.2.-] 
D      TFIIH
E        103946393 probable RNA polymerase II transcription factor B subunit 1-3 isoform X1	K03141 TFIIH1; transcription initiation factor TFIIH subunit 1 
E        103933400 probable RNA polymerase II transcription factor B subunit 1-1 isoform X1	K03141 TFIIH1; transcription initiation factor TFIIH subunit 1 
E        103930639 general transcription factor IIH subunit 2 isoform X1	K03142 TFIIH2; transcription initiation factor TFIIH subunit 2 
E        103953166 RNA polymerase II transcription factor B subunit 4	K03143 TFIIH3; transcription initiation factor TFIIH subunit 3 
E        103930366 RNA polymerase II transcription factor B subunit 2 isoform X2	K03144 TFIIH4; transcription initiation factor TFIIH subunit 4 
E        103963877 DNA repair helicase XPB1	K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] 
E        103963881 DNA repair helicase XPB1	K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] 
E        103947658 LOW QUALITY PROTEIN: DNA repair helicase XPD	K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] 
E        103940953 RNA polymerase II transcription factor B subunit 5	K10845 TTDA; TFIIH basal transcription factor complex TTD-A subunit 
E        103932492 RNA polymerase II transcription factor B subunit 5	K10845 TTDA; TFIIH basal transcription factor complex TTD-A subunit 
E        103932455 RNA polymerase II transcription factor B subunit 5	K10845 TTDA; TFIIH basal transcription factor complex TTD-A subunit 
E        103960795 RNA polymerase II transcription factor B subunit 5-like	K10845 TTDA; TFIIH basal transcription factor complex TTD-A subunit 
E        103939311 cyclin-dependent kinase D-3	K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23] 
E        103950608 cyclin-dependent kinase D-3-like	K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23] 
E        103949037 uncharacterized protein LOC103949037	K10842 MNAT1; CDK-activating kinase assembly factor MAT1 
E        103965368 cyclin-H1-1	K06634 CCNH; cyclin H 
C    Mediator complex
D      Head
E        103941237 LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 6-like	K15128 MED6; mediator of RNA polymerase II transcription subunit 6 
E        103937300 mediator of RNA polymerase II transcription subunit 11-like	K15131 MED11; mediator of RNA polymerase II transcription subunit 11 
E        103968013 mediator of RNA polymerase II transcription subunit 11-like	K15131 MED11; mediator of RNA polymerase II transcription subunit 11 
E        103968017 mediator of RNA polymerase II transcription subunit 11-like	K15131 MED11; mediator of RNA polymerase II transcription subunit 11 
E        103958294 mediator of RNA polymerase II transcription subunit 17	K15133 MED17; mediator of RNA polymerase II transcription subunit 17 
E        103939714 mediator of RNA polymerase II transcription subunit 18 isoform X1	K15135 MED18; mediator of RNA polymerase II transcription subunit 18 
E        103932532 mediator of RNA polymerase II transcription subunit 20a-like isoform X1	K13528 MED20; mediator of RNA polymerase II transcription subunit 20 
E        103951925 mediator of RNA polymerase II transcription subunit 20a-like isoform X1	K13528 MED20; mediator of RNA polymerase II transcription subunit 20 
E        103949101 mediator of RNA polymerase II transcription subunit 22b-like	K15139 MED22; mediator of RNA polymerase II transcription subunit 22 
E        103939390 mediator of RNA polymerase II transcription subunit 28-like	K15141 MED28; mediator of RNA polymerase II transcription subunit 28 
E        103939393 mediator of RNA polymerase II transcription subunit 28-like	K15141 MED28; mediator of RNA polymerase II transcription subunit 28 
E        103928109 mediator of RNA polymerase II transcription subunit 28-like	K15141 MED28; mediator of RNA polymerase II transcription subunit 28 
D      Middle
E        103928533 mediator of RNA polymerase II transcription subunit 7a-like	K15148 MED7; mediator of RNA polymerase II transcription subunit 7 
E        103942325 mediator of RNA polymerase II transcription subunit 7a-like	K15148 MED7; mediator of RNA polymerase II transcription subunit 7 
E        103950119 mediator of RNA polymerase II transcription subunit 10b-like	K15151 MED10; mediator of RNA polymerase II transcription subunit 10 
E        103949319 mediator of RNA polymerase II transcription subunit 10b-like	K15151 MED10; mediator of RNA polymerase II transcription subunit 10 
E        103960213 mediator of RNA polymerase II transcription subunit 10b-like	K15151 MED10; mediator of RNA polymerase II transcription subunit 10 
E        103948162 mediator of RNA polymerase II transcription subunit 21	K15152 MED21; mediator of RNA polymerase II transcription subunit 21 
E        103940763 mediator of RNA polymerase II transcription subunit 21-like	K15152 MED21; mediator of RNA polymerase II transcription subunit 21 
E        103950303 mediator of RNA polymerase II transcription subunit 21-like	K15152 MED21; mediator of RNA polymerase II transcription subunit 21 
E        103953695 mediator of RNA polymerase II transcription subunit 31 isoform X1	K15153 MED31; mediator of RNA polymerase II transcription subunit 31 
D      Tail
E        103954395 mediator of RNA polymerase II transcription subunit 14	K15156 MED14; mediator of RNA polymerase II transcription subunit 14 
E        103942103 mediator of RNA polymerase II transcription subunit 16-like	K15159 MED16; mediator of RNA polymerase II transcription subunit 16 
D      CDK-module
E        103932249 cyclin-dependent kinase E-1-like	K02208 CDK8_11; cyclin-dependent kinase 8/11 [EC:2.7.11.22 2.7.11.23] 
E        103967938 cyclin-dependent kinase E-1-like	K02208 CDK8_11; cyclin-dependent kinase 8/11 [EC:2.7.11.22 2.7.11.23] 
E        103940083 cyclin-dependent kinase E-1-like	K02208 CDK8_11; cyclin-dependent kinase 8/11 [EC:2.7.11.22 2.7.11.23] 
E        103940082 cyclin-dependent kinase E-1-like	K02208 CDK8_11; cyclin-dependent kinase 8/11 [EC:2.7.11.22 2.7.11.23] 
E        103940016 cyclin-C1-2-like isoform X1	K15161 CCNC; cyclin-C 
E        103961402 cyclin-C1-2-like	K15161 CCNC; cyclin-C 
E        103961423 cyclin-C1-2-like	K15161 CCNC; cyclin-C 
E        103964661 mediator of RNA polymerase II transcription subunit 13	K15164 MED13; mediator of RNA polymerase II transcription subunit 13 
D      Other mediators
E        103943067 mediator of RNA polymerase II transcription subunit 23	K15166 MED23; mediator of RNA polymerase II transcription subunit 23 
E        103947186 mediator of RNA polymerase II transcription subunit 25 isoform X1	K15168 MED25; mediator of RNA polymerase II transcription subunit 25 
E        103929181 mediator of RNA polymerase II transcription subunit 25-like isoform X1	K15168 MED25; mediator of RNA polymerase II transcription subunit 25 
E        103940612 mediator of RNA polymerase II transcription subunit 27	K15170 MED27; mediator of RNA polymerase II transcription subunit 27 
E        103936909 mediator of RNA polymerase II transcription subunit 32-like	K27471 MED32; mediator of RNA polymerase II transcription subunit 32 
E        103964602 mediator of RNA polymerase II transcription subunit 32-like	K27471 MED32; mediator of RNA polymerase II transcription subunit 32 
E        103947554 mediator of RNA polymerase II transcription subunit 33B-like	K27472 MED33; mediator of RNA polymerase II transcription subunit 33 
E        103955620 mediator of RNA polymerase II transcription subunit 33A-like	K27472 MED33; mediator of RNA polymerase II transcription subunit 33 
E        103943542 mediator of RNA polymerase II transcription subunit 33A-like	K27472 MED33; mediator of RNA polymerase II transcription subunit 33 
E        103930252 mediator of RNA polymerase II transcription subunit 33A-like	K27472 MED33; mediator of RNA polymerase II transcription subunit 33 
C    Coactivators
D      SAGA/TFTC/STAGA complex
E        103957328 histone acetyltransferase GCN5	K06062 PCAF; histone acetyltransferase [EC:2.3.1.48] 
E        103953542 transformation/transcription domain-associated protein-like isoform X1	K08874 TRRAP; transformation/transcription domain-associated protein 
E        103966744 transformation/transcription domain-associated protein	K08874 TRRAP; transformation/transcription domain-associated protein 
E        103935425 transcriptional adapter ADA2a-like isoform X1	K11314 TADA2A; transcriptional adapter 2-alpha 
E        103933905 transcriptional adapter ADA2b	K11314 TADA2A; transcriptional adapter 2-alpha 
E        103963745 transcriptional adapter ADA2b-like	K11314 TADA2A; transcriptional adapter 2-alpha 
E        103938476 transcription initiation factor TFIID subunit 2 isoform X1	K03128 TAF2; transcription initiation factor TFIID subunit 2 
E        103961745 transcription initiation factor TFIID subunit 4b isoform X1	K03129 TAF4; transcription initiation factor TFIID subunit 4 
E        103953704 LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 5	K03130 TAF5; transcription initiation factor TFIID subunit 5 
E        103951428 transcription initiation factor TFIID subunit 6-like	K03131 TAF6; transcription initiation factor TFIID subunit 6 
E        103955030 transcription initiation factor TFIID subunit 6-like isoform X1	K03131 TAF6; transcription initiation factor TFIID subunit 6 
E        103954044 transcription initiation factor TFIID subunit 7-like	K03132 TAF7; transcription initiation factor TFIID subunit 7 
E        103964509 transcription initiation factor TFIID subunit 7-like	K03132 TAF7; transcription initiation factor TFIID subunit 7 
E        103964275 transcription initiation factor TFIID subunit 9	K03133 TAF9B; transcription initiation factor TFIID subunit 9B 
E        103953133 transcription initiation factor TFIID subunit 10-like isoform X5	K03134 TAF10; transcription initiation factor TFIID subunit 10 
E        103949675 transcription initiation factor TFIID subunit 10	K03134 TAF10; transcription initiation factor TFIID subunit 10 
E        103931992 transcription initiation factor TFIID subunit 12b-like	K03126 TAF12; transcription initiation factor TFIID subunit 12 
E        103961517 transcription initiation factor TFIID subunit 12b-like	K03126 TAF12; transcription initiation factor TFIID subunit 12 
E        103956400 transcription initiation factor TFIID subunit 12 isoform X1	K03126 TAF12; transcription initiation factor TFIID subunit 12 
E        103963633 transcription initiation factor TFIID subunit 12-like isoform X1	K03126 TAF12; transcription initiation factor TFIID subunit 12 
E        103931226 SAGA-associated factor 11 homolog	K11363 SGF11; SAGA-associated factor 11 
E        103945227 SAGA-associated factor 11 homolog	K11363 SGF11; SAGA-associated factor 11 
E        103958988 LOW QUALITY PROTEIN: SAGA-associated factor 11 homolog	K11363 SGF11; SAGA-associated factor 11 
E        103960970 uncharacterized protein LOC103960970 isoform X1	K11364 SGF29; SAGA-associated factor 29 
E        103959711 uncharacterized protein LOC103959711 isoform X1	K11364 SGF29; SAGA-associated factor 29 
E        103930866 protein CHROMATIN REMODELING 5-like isoform X1	K11367 CHD1; chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-] 
E        103934582 protein CHROMATIN REMODELING 5-like isoform X1	K11367 CHD1; chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-] 
E        103941828 transcription and mRNA export factor SUS1-like	K11368 ENY2; enhancer of yellow 2 transcription factor 
E        103941835 transcription and mRNA export factor SUS1-like	K11368 ENY2; enhancer of yellow 2 transcription factor 
E        103960884 transcription and mRNA export factor SUS1-like	K11368 ENY2; enhancer of yellow 2 transcription factor 
E        103949708 ubiquitin carboxyl-terminal hydrolase 22-like	K11366 USP22_27_51; ubiquitin carboxyl-terminal hydrolase 22/27/51 [EC:3.4.19.12] 
E        103949744 ubiquitin carboxyl-terminal hydrolase 22-like	K11366 USP22_27_51; ubiquitin carboxyl-terminal hydrolase 22/27/51 [EC:3.4.19.12] 
E        103953412 ubiquitin carboxyl-terminal hydrolase 22-like	K11366 USP22_27_51; ubiquitin carboxyl-terminal hydrolase 22/27/51 [EC:3.4.19.12] 
E        103928534 pre-mRNA-splicing factor RSE1	K12830 SF3B3; splicing factor 3B subunit 3 
E        103928573 splicing factor 3B subunit 3-like	K12830 SF3B3; splicing factor 3B subunit 3 
E        103948361 splicing factor 3B subunit 3-like	K12830 SF3B3; splicing factor 3B subunit 3 
E        103942326 uncharacterized protein LOC103942326	K12830 SF3B3; splicing factor 3B subunit 3 
E        103936762 splicing factor 3B subunit 3-like	K12830 SF3B3; splicing factor 3B subunit 3 
D      BAF/PBAF complex
E        103940813 ATP-dependent helicase BRM-like	K11647 SMARCA2_4; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-] 
E        103957374 ATP-dependent helicase BRM isoform X1	K11647 SMARCA2_4; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-] 
E        103944712 chromatin structure-remodeling complex protein BSH isoform X1	K11648 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 
E        103949980 SWI/SNF complex subunit SWI3A-like	K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C 
E        103936168 SWI/SNF complex subunit SWI3A-like	K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C 
E        103952336 SWI/SNF complex subunit SWI3B-like isoform X1	K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C 
E        103937513 SWI/SNF complex subunit SWI3D-like	K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C 
E        103933387 SWI/SNF complex subunit SWI3C-like isoform X1	K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C 
E        103933388 SWI/SNF complex subunit SWI3C-like	K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C 
E        103948164 SWI/SNF complex subunit SWI3B-like	K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C 
E        103963123 SWI/SNF complex subunit SWI3D	K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C 
E        103965524 SWI/SNF complex subunit SWI3C isoform X1	K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C 
E        103937328 SWI/SNF complex subunit SWI3B-like	K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C 
E        103964025 SWI/SNF complex subunit SWI3A-like	K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C 
E        103950020 SWI/SNF complex component SNF12 homolog	K11650 SMARCD; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D 
E        103964060 SWI/SNF complex component SNF12 homolog	K11650 SMARCD; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D 
E        103964066 SWI/SNF complex component SNF12 homolog	K11650 SMARCD; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D 
E        103960886 SWI/SNF complex component SNF12 homolog	K11650 SMARCD; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D 
E        103931566 actin-related protein 4-like	K11340 ACTL6A; actin-like protein 6A 
E        103936504 actin-related protein 4-like	K11340 ACTL6A; actin-like protein 6A 
D      SWI/SNF complex
E        103944712 chromatin structure-remodeling complex protein BSH isoform X1	K11648 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 
D      RSC complex
D      Others
E        103949252 RNA polymerase II transcriptional coactivator KELP-like	K25815 SUB1; activated RNA polymerase II transcriptional coactivator p15 
E        103966754 RNA polymerase II transcriptional coactivator KIWI-like	K25815 SUB1; activated RNA polymerase II transcriptional coactivator p15 
E        103946780 RNA polymerase II transcriptional coactivator KIWI-like	K25815 SUB1; activated RNA polymerase II transcriptional coactivator p15 
E        103933903 RNA polymerase II transcriptional coactivator KELP-like	K25815 SUB1; activated RNA polymerase II transcriptional coactivator p15 
C    Other transcription-related factors
D      Transcription elongation factors
E        103953729 transcription elongation factor TFIIS-like	K03145 TFIIS; transcription elongation factor S-II 
E        103942894 transcription elongation factor SPT4 homolog 2	K15171 SUPT4H1; transcription elongation factor SPT4 
E        103957708 transcription elongation factor SPT4 homolog 2-like	K15171 SUPT4H1; transcription elongation factor SPT4 
E        103957729 transcription elongation factor SPT4 homolog 2-like	K15171 SUPT4H1; transcription elongation factor SPT4 
E        103956807 transcription elongation factor SPT4 homolog 1-like	K15171 SUPT4H1; transcription elongation factor SPT4 
E        103951138 putative transcription elongation factor SPT5 homolog 1 isoform X1	K15172 SUPT5H; transcription elongation factor SPT5 
E        103966282 putative transcription elongation factor SPT5 homolog 1	K15172 SUPT5H; transcription elongation factor SPT5 
E        103965885 putative transcription elongation factor SPT5 homolog 1	K15172 SUPT5H; transcription elongation factor SPT5 
E        103966217 transcription elongation factor SPT6	K11292 SUPT6H; transcription elongation factor SPT6 
D      Transcription termination factor
E        103944297 polyadenylation and cleavage factor homolog 4-like isoform X1	K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11 
E        103948144 polyadenylation and cleavage factor homolog 4-like isoform X1	K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11 
E        103933021 polyadenylation and cleavage factor homolog 4-like isoform X1	K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11 
E        103953822 polyadenylation and cleavage factor homolog 4-like isoform X1	K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11 
E        103955176 polyadenylation and cleavage factor homolog 4-like	K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11 
E        103963436 cleavage and polyadenylation specificity factor subunit 1	K14401 CPSF1; cleavage and polyadenylation specificity factor subunit 1 
E        103940380 cleavage and polyadenylation specificity factor subunit 3-I-like	K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-] 
E        103946324 cleavage and polyadenylation specificity factor subunit 3-I-like	K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-] 
E        103946123 CAR1 transcription factor isoform X1	K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4 
E        103936304 30-kDa cleavage and polyadenylation specificity factor 30-like	K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4 
E        103952383 30-kDa cleavage and polyadenylation specificity factor 30-like	K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4 
E        103930257 serine/threonine-protein phosphatase PP1-like	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        103942861 serine/threonine-protein phosphatase PP1 isozyme 4	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        103930597 serine/threonine-protein phosphatase PP1 isoform X1	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        103934453 serine/threonine-protein phosphatase PP1-like	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        103934466 serine/threonine-protein phosphatase PP1 isozyme 1-like	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        103939751 serine/threonine-protein phosphatase PP1 isoform X1	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        103935911 serine/threonine-protein phosphatase PP1 isozyme 4-like	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        103931814 serine/threonine-protein phosphatase PP1 isozyme 2-like	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        103954363 serine/threonine-protein phosphatase PP1 isozyme 1-like	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        103960168 serine/threonine-protein phosphatase PP1-like	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        103962936 serine/threonine-protein phosphatase PP1-like	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        103966329 LOW QUALITY PROTEIN: uncharacterized protein LOC103966329	K06100 SYMPK; symplekin 
E        103950542 RNA polymerase II subunit A C-terminal domain phosphatase SSU72-like	K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16] 
E        103946900 RNA polymerase II subunit A C-terminal domain phosphatase SSU72-like	K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16] 
E        103927935 5'-3' exoribonuclease 3 isoform X1	K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-] 
E        103961063 decapping nuclease DXO homolog, chloroplastic	K14845 RAI1; RAT1-interacting protein 
E        103936110 regulation of nuclear pre-mRNA domain-containing protein 1B-like isoform X2	K15559 RTT103; regulator of Ty1 transposition protein 103 
E        103944330 regulation of nuclear pre-mRNA domain-containing protein 1B-like	K15559 RTT103; regulator of Ty1 transposition protein 103 
E        103934088 regulation of nuclear pre-mRNA domain-containing protein 1A isoform X1	K15559 RTT103; regulator of Ty1 transposition protein 103 
E        103938507 regulation of nuclear pre-mRNA domain-containing protein 1B-like isoform X1	K15559 RTT103; regulator of Ty1 transposition protein 103 
E        103955153 regulation of nuclear pre-mRNA domain-containing protein 1B-like isoform X1	K15559 RTT103; regulator of Ty1 transposition protein 103 
E        103966556 regulation of nuclear pre-mRNA domain-containing protein 1B-like	K15559 RTT103; regulator of Ty1 transposition protein 103 
E        103933212 peptidyl-prolyl cis-trans isomerase Pin1	K09578 PIN1; peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [EC:5.2.1.8] 
D      PAF1 complex
E        103934510 protein PAF1 homolog	K15174 PAF1; RNA polymerase II-associated factor 1 
E        103944809 protein PAF1 homolog	K15174 PAF1; RNA polymerase II-associated factor 1 
E        103928031 protein CDC73 homolog	K15175 CDC73; parafibromin 
E        103937648 protein CDC73 homolog	K15175 CDC73; parafibromin 
E        103959240 protein CDC73 homolog	K15175 CDC73; parafibromin 
E        103951927 protein CTR9 homolog	K15176 CTR9; RNA polymerase-associated protein CTR9 
E        103930761 protein LEO1 homolog isoform X1	K15177 LEO1; RNA polymerase-associated protein LEO1 
E        103931353 protein LEO1 homolog isoform X1	K15177 LEO1; RNA polymerase-associated protein LEO1 
E        103938781 protein RTF1 homolog	K15178 RTF1; RNA polymerase-associated protein RTF1 
E        103928219 protein RTF1 homolog	K15178 RTF1; RNA polymerase-associated protein RTF1 
E        103966950 protein RTF1 homolog	K15178 RTF1; RNA polymerase-associated protein RTF1 
E        103962336 protein RTF1 homolog	K15178 RTF1; RNA polymerase-associated protein RTF1 
E        103930069 protein RTF1 homolog	K15178 RTF1; RNA polymerase-associated protein RTF1 
D      NELF complex
E        103942604 negative elongation factor C/D-like	K15181 TH1L; negative elongation factor C/D 
D      Super elongation complex (SEC)
E        103948424 ELL-associated factor 2-like	K15186 EAF; ELL-associated factor 
E        103947047 ELL-associated factor 2-like	K15186 EAF; ELL-associated factor 
E        103961057 ell-associated factor Eaf	K15186 EAF; ELL-associated factor 
E        103952017 cyclin-T1-3-like	K15188 CCNT; cyclin T 
E        103952018 cyclin-T1-5-like	K15188 CCNT; cyclin T 
E        103940736 cyclin-T1-3-like isoform X1	K15188 CCNT; cyclin T 
E        103940737 cyclin-T1-5-like isoform X1	K15188 CCNT; cyclin T 
E        103954141 cyclin-T1-4-like	K15188 CCNT; cyclin T 
E        103957744 cyclin-T1-4-like	K15188 CCNT; cyclin T 
E        103956613 cyclin-T1-4-like	K15188 CCNT; cyclin T 
E        103956614 cyclin-T1-4-like	K15188 CCNT; cyclin T 
D      Little elongation complex (LEC)
D      Brd4/P-TEFb complex
E        103952017 cyclin-T1-3-like	K15188 CCNT; cyclin T 
E        103952018 cyclin-T1-5-like	K15188 CCNT; cyclin T 
E        103940736 cyclin-T1-3-like isoform X1	K15188 CCNT; cyclin T 
E        103940737 cyclin-T1-5-like isoform X1	K15188 CCNT; cyclin T 
E        103954141 cyclin-T1-4-like	K15188 CCNT; cyclin T 
E        103957744 cyclin-T1-4-like	K15188 CCNT; cyclin T 
E        103956613 cyclin-T1-4-like	K15188 CCNT; cyclin T 
E        103956614 cyclin-T1-4-like	K15188 CCNT; cyclin T 
D      BUR kinase complex
D      CTDK-I complex
D      7SK RNP complex
E        103943876 probable RNA methyltransferase At5g51130	K15190 MEPCE; 7SK snRNA methylphosphate capping enzyme [EC:2.1.1.-] 
E        103951269 la-related protein 6A	K15191 LARP7; La-related protein 7 
E        103935617 la-related protein 6B	K15191 LARP7; La-related protein 7 
E        103956046 la-related protein 6B-like	K15191 LARP7; La-related protein 7 
E        103952017 cyclin-T1-3-like	K15188 CCNT; cyclin T 
E        103952018 cyclin-T1-5-like	K15188 CCNT; cyclin T 
E        103940736 cyclin-T1-3-like isoform X1	K15188 CCNT; cyclin T 
E        103940737 cyclin-T1-5-like isoform X1	K15188 CCNT; cyclin T 
E        103954141 cyclin-T1-4-like	K15188 CCNT; cyclin T 
E        103957744 cyclin-T1-4-like	K15188 CCNT; cyclin T 
E        103956613 cyclin-T1-4-like	K15188 CCNT; cyclin T 
E        103956614 cyclin-T1-4-like	K15188 CCNT; cyclin T 
D      DBIRD complex
D      Others
E        103931460 TATA-binding protein-associated factor BTAF1-like isoform X1	K15192 BTAF1; TATA-binding protein-associated factor [EC:5.6.2.-] 
E        103964971 TATA-binding protein-associated factor BTAF1-like isoform X1	K15192 BTAF1; TATA-binding protein-associated factor [EC:5.6.2.-] 
E        103930016 protein Dr1 homolog	K21751 DR1; down-regulator of transcription 1 
E        103938346 protein Dr1 homolog	K21751 DR1; down-regulator of transcription 1 
E        103952116 dr1-associated corepressor homolog	K21752 DRAP1; Dr1-associated corepressor 
E        103926724 uncharacterized protein LOC103926724	K15193 SPTY2D1; protein SPT2 
E        103932891 uncharacterized protein LOC103932891	K15193 SPTY2D1; protein SPT2 
E        103933541 uncharacterized protein LOC103933541	K15193 SPTY2D1; protein SPT2 
E        103947641 protein spt2-like isoform X1	K15193 SPTY2D1; protein SPT2 
E        103943527 neurofilament heavy polypeptide-like	K15193 SPTY2D1; protein SPT2 
E        103928905 RNA polymerase II C-terminal domain phosphatase-like 1	K18998 CPL1_2; RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:3.1.3.16] 
E        103936599 RNA polymerase II C-terminal domain phosphatase-like 2 isoform X1	K18998 CPL1_2; RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:3.1.3.16] 
E        103966353 RNA polymerase II C-terminal domain phosphatase-like 2	K18998 CPL1_2; RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:3.1.3.16] 
E        103956069 RNA polymerase II C-terminal domain phosphatase-like 4 isoform X1	K18999 CPL3_4; RNA polymerase II C-terminal domain phosphatase-like 3/4 [EC:3.1.3.16] 
E        103967268 RNA polymerase II C-terminal domain phosphatase-like 3	K18999 CPL3_4; RNA polymerase II C-terminal domain phosphatase-like 3/4 [EC:3.1.3.16] 
E        103938246 RNA polymerase II C-terminal domain phosphatase-like 4	K18999 CPL3_4; RNA polymerase II C-terminal domain phosphatase-like 3/4 [EC:3.1.3.16] 
E        103950415 RNA polymerase II C-terminal domain phosphatase-like 3	K18999 CPL3_4; RNA polymerase II C-terminal domain phosphatase-like 3/4 [EC:3.1.3.16] 
E        103929141 RNA polymerase II C-terminal domain phosphatase-like 4	K18999 CPL3_4; RNA polymerase II C-terminal domain phosphatase-like 3/4 [EC:3.1.3.16] 
E        103943240 carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1-like	K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] 
E        103936809 carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1-like	K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] 
E        103944692 CTD nuclear envelope phosphatase 1-like	K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] 
E        103938066 carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1-like	K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] 
E        103944230 probable C-terminal domain small phosphatase	K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] 
E        103958610 probable C-terminal domain small phosphatase	K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] 
E        103966328 carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1-like	K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] 
E        103944047 CTD small phosphatase-like protein	K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] 
E        103960465 LOW QUALITY PROTEIN: protein IWS1 homolog	K17498 SPN1; transcription factor SPN1 
E        103938125 transcription factor IWS1-like	K17498 SPN1; transcription factor SPN1 
E        103939489 transcriptional elongation regulator MINIYO	K20826 RPAP1; RNA polymerase II-associated protein 1 
E        103928237 putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog	K20827 RPAP2; RNA polymerase II-associated protein 2 [EC:3.1.3.16] 
E        103962317 RNA polymerase II-associated protein 3 isoform X1	K23002 RPAP3; RNA polymerase II-associated protein 3 
E        103948623 agamous-like MADS-box protein AGL29	K12412 MCM1; pheromone receptor transcription factor 
E        103948626 agamous-like MADS-box protein AGL29	K12412 MCM1; pheromone receptor transcription factor 
E        103926825 GPN-loop GTPase 3-like isoform X1	K24104 GPN; GPN-loop GTPase 
E        103941178 GPN-loop GTPase 3-like	K24104 GPN; GPN-loop GTPase 
E        103942020 GPN-loop GTPase 3-like isoform X1	K24104 GPN; GPN-loop GTPase 
E        103951203 GPN-loop GTPase 2-like isoform X1	K24104 GPN; GPN-loop GTPase 
E        103944385 GPN-loop GTPase 1-like isoform X1	K24104 GPN; GPN-loop GTPase 
E        103964016 GPN-loop GTPase 2-like	K24104 GPN; GPN-loop GTPase 
E        103956237 GPN-loop GTPase 1-like isoform X1	K24104 GPN; GPN-loop GTPase 
B  RNA polymerase III system
C    RNA polymerase III
D      Core subunits
E        103949005 DNA-directed RNA polymerase III subunit 1-like	K03018 RPC1; DNA-directed RNA polymerase III subunit RPC1 [EC:2.7.7.6] 
E        103956463 DNA-directed RNA polymerase III subunit 2	K03021 RPC2; DNA-directed RNA polymerase III subunit RPC2 [EC:2.7.7.6] 
E        103940708 LOW QUALITY PROTEIN: DNA-directed RNA polymerases I and III subunit rpac1-like	K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1 
E        103956902 DNA-directed RNA polymerases I and III subunit rpac1-like isoform X1	K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1 
E        103967872 DNA-directed RNA polymerases I and III subunit rpac1-like isoform X1	K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1 
E        103964601 DNA-directed RNA polymerases I and III subunit RPAC2-like	K03020 RPAC2; DNA-directed RNA polymerases I and III subunit RPAC2 
E        103963118 DNA-directed RNA polymerases I and III subunit RPAC2-like	K03020 RPAC2; DNA-directed RNA polymerases I and III subunit RPAC2 
D      Pol III specific subunits
E        103934923 DNA-directed RNA polymerase III subunit RPC3-like	K03023 RPC3; DNA-directed RNA polymerase III subunit RPC3 
E        103932204 DNA-directed RNA polymerase III subunit RPC3-like isoform X1	K03023 RPC3; DNA-directed RNA polymerase III subunit RPC3 
E        103951924 uncharacterized protein LOC103951924	K03026 RPC4; DNA-directed RNA polymerase III subunit RPC4 
E        103959808 uncharacterized protein LOC103959808	K03026 RPC4; DNA-directed RNA polymerase III subunit RPC4 
E        103963446 uncharacterized protein LOC103963446	K03026 RPC4; DNA-directed RNA polymerase III subunit RPC4 
E        103961935 uncharacterized protein LOC103961935	K03026 RPC4; DNA-directed RNA polymerase III subunit RPC4 
E        103932654 DNA-directed RNA polymerase III subunit RPC4-like	K03026 RPC4; DNA-directed RNA polymerase III subunit RPC4 
E        103947489 DNA-directed RNA polymerase III subunit RPC5 isoform X1	K14721 RPC5; DNA-directed RNA polymerase III subunit RPC5 
E        103937623 DNA-directed RNA polymerase III subunit rpc6-like	K03025 RPC6; DNA-directed RNA polymerase III subunit RPC6 
E        103937606 DNA-directed RNA polymerase III subunit rpc6-like	K03025 RPC6; DNA-directed RNA polymerase III subunit RPC6 
E        103956972 DNA-directed RNA polymerase III subunit rpc31-like	K03024 RPC7; DNA-directed RNA polymerase III subunit RPC7 
E        103956694 DNA-directed RNA polymerase III subunit RPC7-like	K03024 RPC7; DNA-directed RNA polymerase III subunit RPC7 
E        103935865 uncharacterized protein LOC103935865 isoform X1	K25304 RPC9; DNA-directed RNA polymerase III subunit RPC9 
E        103964242 DNA-directed RNA polymerase III subunit RPC10-like	K03019 RPC11; DNA-directed RNA polymerase III subunit RPC11 
D      Pol I, II, III common subunits
E        103944004 DNA-directed RNA polymerases II and IV subunit 5A-like	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        103951867 DNA-directed RNA polymerases II and IV subunit 5A-like isoform X1	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        103952158 DNA-directed RNA polymerase V subunit 5C	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        103937885 DNA-directed RNA polymerase V subunit 5A-like	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        103929708 DNA-directed RNA polymerases II and IV subunit 5A-like isoform X1	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        103932172 DNA-directed RNA polymerase V subunit 5A-like	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        103947899 DNA-directed RNA polymerases II and V subunit 6B-like	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        103945450 DNA-directed RNA polymerases II, IV and V subunit 6A-like	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        103934995 DNA-directed RNA polymerases II, IV and V subunit 6A-like	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        103956263 DNA-directed RNA polymerases II, IV and V subunit 6A-like	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        103940532 DNA-directed RNA polymerases II and V subunit 8A-like	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        103934091 DNA-directed RNA polymerases II and V subunit 8A-like	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        103955918 DNA-directed RNA polymerases II and V subunit 8A-like	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        103959268 DNA-directed RNA polymerases II and V subunit 8A-like	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        103946511 DNA-directed RNA polymerases II, IV and V subunit 12-like	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
E        103968024 DNA-directed RNA polymerases II, IV and V subunit 12-like	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
E        103940796 DNA-directed RNA polymerase subunit 10-like protein	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
E        103957831 DNA-directed RNA polymerase subunit 10-like protein	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
E        103956120 DNA-directed RNA polymerase subunit 10-like protein	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
C    Basal transcription factors
D      TFIIIA
E        103952573 transcription factor IIIA-like isoform X1	K09191 GTF3A; general transcription factor IIIA 
E        103929448 transcription factor IIIA-like	K09191 GTF3A; general transcription factor IIIA 
E        103938852 transcription factor IIIA-like isoform X1	K09191 GTF3A; general transcription factor IIIA 
E        103962290 transcription factor IIIA-like isoform X1	K09191 GTF3A; general transcription factor IIIA 
E        103962954 transcription factor IIIA-like	K09191 GTF3A; general transcription factor IIIA 
D      TFIIIB
E        103944416 TATA-box-binding protein 1	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        103931445 TATA-box-binding protein-like	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        103930165 TATA-box-binding protein 2-like	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        103956208 TATA-box-binding protein 1-like	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        103944532 plant-specific TFIIB-related protein PTF2	K15196 BRF1; transcription factor IIIB 90 kDa subunit 
E        103950407 transcription factor TFIIIB component B''-like	K15198 BDP1; transcription factor TFIIIB component B'' 
E        103967145 uncharacterized protein LOC103967145	K15198 BDP1; transcription factor TFIIIB component B'' 
D      TFIIIC
E        103961518 uncharacterized protein LOC103961518	K15199 GTF3C1; general transcription factor 3C polypeptide 1 
E        103947778 uncharacterized protein LOC103947778 isoform X1	K15200 GTF3C2; general transcription factor 3C polypeptide 2 
E        103947468 general transcription factor 3C polypeptide 3-like	K15201 GTP3C3; general transcription factor 3C polypeptide 3 (transcription factor C subunit 4) 
E        103966259 LOW QUALITY PROTEIN: general transcription factor 3C polypeptide 3-like	K15201 GTP3C3; general transcription factor 3C polypeptide 3 (transcription factor C subunit 4) 
E        103935615 general transcription factor 3C polypeptide 5-like isoform X1	K15202 GTF3C5; general transcription factor 3C polypeptide 5 (transcription factor C subunit 1) 
E        103947639 uncharacterized protein LOC103947639	K15203 GTF3C6; general transcription factor 3C polypeptide 6 
E        103935535 uncharacterized protein LOC103935535 isoform X1	K15203 GTF3C6; general transcription factor 3C polypeptide 6 
E        103966964 general transcription factor 3C polypeptide 6 isoform X1	K15203 GTF3C6; general transcription factor 3C polypeptide 6 
D      TFIIIC, fungi type
E        103935615 general transcription factor 3C polypeptide 5-like isoform X1	K15202 GTF3C5; general transcription factor 3C polypeptide 5 (transcription factor C subunit 1) 
E        103947468 general transcription factor 3C polypeptide 3-like	K15201 GTP3C3; general transcription factor 3C polypeptide 3 (transcription factor C subunit 4) 
E        103966259 LOW QUALITY PROTEIN: general transcription factor 3C polypeptide 3-like	K15201 GTP3C3; general transcription factor 3C polypeptide 3 (transcription factor C subunit 4) 
C    Other transcription-related factors
D      snRNA-activating protein complex (SNAPc)
E        103966278 uncharacterized protein LOC103966278	K15208 SNAPC1; snRNA-activating protein complex subunit 1 
E        103963021 snRNA-activating protein complex subunit-like	K15210 SNAPC3; snRNA-activating protein complex subunit 3 
E        103955513 snRNA-activating protein complex subunit-like	K15210 SNAPC3; snRNA-activating protein complex subunit 3 
D      Octamer transcription factors
D      Others
E        103948332 repressor of RNA polymerase III transcription MAF1 homolog	K25817 MAF1; repressor of RNA polymerase III transcription MAF1 
E        103947057 repressor of RNA polymerase III transcription MAF1 homolog	K25817 MAF1; repressor of RNA polymerase III transcription MAF1 
B  RNA polymerase I system
C    RNA polymerase I
D      Core subunits
E        103936881 DNA-directed RNA polymerase I subunit 1 isoform X1	K02999 RPA1; DNA-directed RNA polymerase I subunit RPA1 [EC:2.7.7.6] 
E        103942286 DNA-directed RNA polymerase I subunit RPA2-like	K03002 RPA2; DNA-directed RNA polymerase I subunit RPA2 [EC:2.7.7.6] 
E        103946321 DNA-directed RNA polymerase I subunit 2 isoform X1	K03002 RPA2; DNA-directed RNA polymerase I subunit RPA2 [EC:2.7.7.6] 
E        103940708 LOW QUALITY PROTEIN: DNA-directed RNA polymerases I and III subunit rpac1-like	K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1 
E        103956902 DNA-directed RNA polymerases I and III subunit rpac1-like isoform X1	K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1 
E        103967872 DNA-directed RNA polymerases I and III subunit rpac1-like isoform X1	K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1 
E        103964601 DNA-directed RNA polymerases I and III subunit RPAC2-like	K03020 RPAC2; DNA-directed RNA polymerases I and III subunit RPAC2 
E        103963118 DNA-directed RNA polymerases I and III subunit RPAC2-like	K03020 RPAC2; DNA-directed RNA polymerases I and III subunit RPAC2 
D      Pol I specific subunits
E        103946519 DNA-directed RNA polymerase I subunit rpa49-like	K03005 RPA49; DNA-directed RNA polymerase I subunit RPA49 
E        103932775 DNA-directed RNA polymerase I subunit rpa49-like	K03005 RPA49; DNA-directed RNA polymerase I subunit RPA49 
E        103961543 DNA-directed RNA polymerase I subunit rpa49-like	K03005 RPA49; DNA-directed RNA polymerase I subunit RPA49 
E        103927634 DNA-directed RNA polymerase I subunit RPA12 isoform X1	K03000 RPA12; DNA-directed RNA polymerase I subunit RPA12 
D      Pol I, II, III common subunits
E        103944004 DNA-directed RNA polymerases II and IV subunit 5A-like	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        103951867 DNA-directed RNA polymerases II and IV subunit 5A-like isoform X1	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        103952158 DNA-directed RNA polymerase V subunit 5C	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        103937885 DNA-directed RNA polymerase V subunit 5A-like	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        103929708 DNA-directed RNA polymerases II and IV subunit 5A-like isoform X1	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        103932172 DNA-directed RNA polymerase V subunit 5A-like	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        103947899 DNA-directed RNA polymerases II and V subunit 6B-like	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        103945450 DNA-directed RNA polymerases II, IV and V subunit 6A-like	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        103934995 DNA-directed RNA polymerases II, IV and V subunit 6A-like	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        103956263 DNA-directed RNA polymerases II, IV and V subunit 6A-like	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        103940532 DNA-directed RNA polymerases II and V subunit 8A-like	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        103934091 DNA-directed RNA polymerases II and V subunit 8A-like	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        103955918 DNA-directed RNA polymerases II and V subunit 8A-like	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        103959268 DNA-directed RNA polymerases II and V subunit 8A-like	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        103946511 DNA-directed RNA polymerases II, IV and V subunit 12-like	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
E        103968024 DNA-directed RNA polymerases II, IV and V subunit 12-like	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
E        103940796 DNA-directed RNA polymerase subunit 10-like protein	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
E        103957831 DNA-directed RNA polymerase subunit 10-like protein	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
E        103956120 DNA-directed RNA polymerase subunit 10-like protein	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
C    Basal transcription factors
D      SL1/TIF-1B
E        103944416 TATA-box-binding protein 1	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        103931445 TATA-box-binding protein-like	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        103930165 TATA-box-binding protein 2-like	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        103956208 TATA-box-binding protein 1-like	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
C    Other transcription-related factors
D      UBF
E        103943761 high mobility group B protein 6-like	K09273 UBTF; upstream-binding transcription factor 
D      Transcription initiation factors
E        103950283 uncharacterized protein LOC103950283	K15216 RRN3; RNA polymerase I-specific transcription initiation factor RRN3 
E        103959149 RNA polymerase I-specific transcription initiation factor RRN3	K15216 RRN3; RNA polymerase I-specific transcription initiation factor RRN3 
E        103937750 upstream activation factor subunit spp27 isoform X1	K15223 UAF30; upstream activation factor subunit UAF30 
E        103964526 upstream activation factor subunit UAF30-like isoform X1	K15223 UAF30; upstream activation factor subunit UAF30 
E        103937749 upstream activation factor subunit spp27-like isoform X1	K15223 UAF30; upstream activation factor subunit UAF30 
D      Transcription elongation factors
E        103942894 transcription elongation factor SPT4 homolog 2	K15171 SUPT4H1; transcription elongation factor SPT4 
E        103957708 transcription elongation factor SPT4 homolog 2-like	K15171 SUPT4H1; transcription elongation factor SPT4 
E        103957729 transcription elongation factor SPT4 homolog 2-like	K15171 SUPT4H1; transcription elongation factor SPT4 
E        103956807 transcription elongation factor SPT4 homolog 1-like	K15171 SUPT4H1; transcription elongation factor SPT4 
E        103951138 putative transcription elongation factor SPT5 homolog 1 isoform X1	K15172 SUPT5H; transcription elongation factor SPT5 
E        103966282 putative transcription elongation factor SPT5 homolog 1	K15172 SUPT5H; transcription elongation factor SPT5 
E        103965885 putative transcription elongation factor SPT5 homolog 1	K15172 SUPT5H; transcription elongation factor SPT5 
D      NoRC (nucleolar remodeling complex)
E        103943625 ISWI chromatin-remodeling complex ATPase CHR11	K11654 SMARCA5; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-] 
E        103932034 ISWI chromatin-remodeling complex ATPase CHR11-like	K11654 SMARCA5; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-] 
E        103958563 ISWI chromatin-remodeling complex ATPase CHR11-like	K11654 SMARCA5; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-] 
D      CTDK-I complex
D      Transcription termination factors
D      Others
#
A<b>Prokaryotic type</b>
B  Bacterial type
C    RNA polymerase
D      Core subunits
D      Sigma factors
E        103951476 RNA polymerase sigma factor sigA isoform X1	K03086 rpoD; RNA polymerase primary sigma factor 
E        103940520 RNA polymerase sigma factor sigA-like	K03086 rpoD; RNA polymerase primary sigma factor 
E        103951768 RNA polymerase sigma factor sigC-like isoform X1	K03093 sigI; RNA polymerase sigma-I factor 
E        103948057 RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like isoform X2	K03093 sigI; RNA polymerase sigma-I factor 
E        103958163 RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like isoform X2	K03093 sigI; RNA polymerase sigma-I factor 
E        103959521 RNA polymerase sigma factor sigC-like isoform X1	K03093 sigI; RNA polymerase sigma-I factor 
E        103957060 RNA polymerase sigma factor sigC isoform X1	K03093 sigI; RNA polymerase sigma-I factor 
C    Other transcription-related factors
D      RNA polymerase-associated proteins
D      Transcription elongation factors
D      Transcription termination factor
B  Archaeal type
C    RNA polymerase
D      Core subunits
C    Basal transcription factors
D      TFB
E        103946495 transcription initiation factor IIB-2	K03124 TFIIB; transcription initiation factor TFIIB 
E        103958783 transcription initiation factor IIB-like	K03124 TFIIB; transcription initiation factor TFIIB 
E        103960808 plant-specific TFIIB-related protein 1	K03124 TFIIB; transcription initiation factor TFIIB 
E        103955692 transcription initiation factor IIB-2-like	K03124 TFIIB; transcription initiation factor TFIIB 
E        103955694 transcription initiation factor IIB-2-like	K03124 TFIIB; transcription initiation factor TFIIB 
E        103955755 transcription initiation factor IIB-like	K03124 TFIIB; transcription initiation factor TFIIB 
E        103955757 transcription initiation factor IIB-2-like	K03124 TFIIB; transcription initiation factor TFIIB 
E        103955776 transcription initiation factor IIB-like	K03124 TFIIB; transcription initiation factor TFIIB 
E        103955787 transcription initiation factor IIB-like	K03124 TFIIB; transcription initiation factor TFIIB 
D      TFE
E        103929905 general transcription factor IIE subunit 1-like	K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha 
E        103938461 general transcription factor IIE subunit 1-like	K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha 
D      TFS
!
#<hr>
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#Last updated: April 9, 2024