+E
#<h2><a href="/kegg/brite.html"><img src="/Fig/bget/kegg3.gif" align="middle" border=0></a>&nbsp; Transcription Machinery - Quillaja saponaria (soapbark tree)</h2>
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A<b>Eukaryotic type</b>
B  RNA polymerase II system
C    RNA polymerase II
D      Core subunits
E        O6P43_024914 DNA-directed RNA polymerase subunit	K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6] 
E        O6P43_033562 DNA-directed RNA polymerase subunit	K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6] 
E        O6P43_031838 DNA-directed RNA polymerase subunit beta	K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6] 
E        O6P43_031062 putative DNA-directed RNA polymerase II subunit	K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3 
E        O6P43_029556 DNA-directed RNA polymerases II, IV and V subunit 11-like	K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11 
D      Pol II specific subunits
E        O6P43_012064 DNA-directed RNA polymerase II subunit 4	K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4 
E        O6P43_005238 DNA-directed RNA polymerase II subunit 4-like	K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4 
E        O6P43_023290 DNA-directed RNA polymerase II subunit 4	K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4 
E        O6P43_020684 DNA-directed RNA polymerase II subunit RPB7	K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7 
E        O6P43_003651 DNA-directed RNA polymerase subunit	K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9 
E        O6P43_021837 DNA-directed RNA polymerase subunit	K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9 
D      Pol I, II, III common subunits
E        O6P43_007900 DNA-directed RNA polymerases II and IV subunit 5A	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        O6P43_010076 DNA-directed RNA polymerase, RPB5 subunit	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        O6P43_029681 putative DNA-directed RNA polymerase II	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        O6P43_003999 DNA-directed RNA polymerases II and IV subunit 5A-like	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        O6P43_006401 putative DNA-directed RNA polymerase II	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        O6P43_017039 DNA-directed RNA polymerases II and V subunit 6B	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        O6P43_008256 DNA-directed RNA polymerases II and V subunit 6B	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        O6P43_000040 DNA-directed RNA polymerases II and V subunit 8A-like	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        O6P43_030433 DNA-directed RNA polymerases II, IV and V subunit 8B-like	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        O6P43_023247 DNA-directed RNA polymerases II and V subunit 8A-like	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        O6P43_025279 DNA-directed RNA polymerases I/II/III subunit	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
E        O6P43_033182 DNA-directed RNA polymerases I/II/III subunit	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
D      Pol IV and V specific subunits
E        O6P43_024240 DNA-directed RNA polymerase subunit	K16250 NRPD1; DNA-directed RNA polymerase IV subunit 1 [EC:2.7.7.6] 
E        O6P43_001480 DNA-directed RNA polymerase subunit	K16251 NRPE1; DNA-directed RNA polymerase V subunit 1 [EC:2.7.7.6] 
E        O6P43_001540 DNA-directed RNA polymerase subunit	K16251 NRPE1; DNA-directed RNA polymerase V subunit 1 [EC:2.7.7.6] 
E        O6P43_019216 DNA-directed RNA polymerase subunit beta	K16252 NRPD2; DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6] 
E        O6P43_015765 DNA-directed RNA polymerase subunit beta	K16252 NRPD2; DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6] 
E        O6P43_003271 DNA-directed RNA polymerase II subunit	K16253 NRPD7; DNA-directed RNA polymerase IV and V subunit 7 
E        O6P43_003272 DNA-directed RNA polymerase II subunit RPB7	K16253 NRPD7; DNA-directed RNA polymerase IV and V subunit 7 
E        O6P43_021479 DNA-directed RNA polymerase II subunit RPB7	K16253 NRPD7; DNA-directed RNA polymerase IV and V subunit 7 
C    Basal transcription factors
D      TFIIA
E        O6P43_000172 transcription initiation factor IIA large subunit	K03122 TFIIA1; transcription initiation factor TFIIA large subunit 
E        O6P43_028192 transcription initiation factor IIA large subunit	K03122 TFIIA1; transcription initiation factor TFIIA large subunit 
E        O6P43_019548 Transcription initiation factor IIA subunit 2	K03123 TFIIA2; transcription initiation factor TFIIA small subunit 
E        O6P43_015438 Transcription initiation factor IIA subunit 2	K03123 TFIIA2; transcription initiation factor TFIIA small subunit 
D      TFIIB
E        O6P43_010126 Transcription initiation factor IIB	K03124 TFIIB; transcription initiation factor TFIIB 
E        O6P43_004410 Transcription initiation factor IIB	K03124 TFIIB; transcription initiation factor TFIIB 
E        O6P43_006487 Transcription initiation factor IIB	K03124 TFIIB; transcription initiation factor TFIIB 
E        O6P43_033727 transcription initiation factor IIB	K03124 TFIIB; transcription initiation factor TFIIB 
D      TFIID
E        O6P43_001817 TATA-box-binding protein	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        O6P43_003851 TATA-box-binding protein	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        O6P43_022043 TATA-box-binding protein	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        O6P43_033429 Transcription initiation factor TFIID subunit 1	K03125 TAF1; transcription initiation factor TFIID subunit 1 [EC:2.3.1.48 2.7.11.1] 
E        O6P43_022999 transcription initiation factor TFIID subunit 2	K03128 TAF2; transcription initiation factor TFIID subunit 2 
E        O6P43_013272 transcription initiation factor TFIID subunit 4b-like	K03129 TAF4; transcription initiation factor TFIID subunit 4 
E        O6P43_030219 transcription initiation factor TFIID subunit 4b-like	K03129 TAF4; transcription initiation factor TFIID subunit 4 
E        O6P43_015757 transcription initiation factor TFIID subunit 5	K03130 TAF5; transcription initiation factor TFIID subunit 5 
E        O6P43_014511 transcription initiation factor TFIID subunit 6	K03131 TAF6; transcription initiation factor TFIID subunit 6 
E        O6P43_021232 transcription initiation factor TFIID subunit 6-like	K03131 TAF6; transcription initiation factor TFIID subunit 6 
E        O6P43_014947 Transcription initiation factor TFIID subunit 7	K03132 TAF7; transcription initiation factor TFIID subunit 7 
E        O6P43_022014 Transcription initiation factor TFIID subunit 7	K03132 TAF7; transcription initiation factor TFIID subunit 7 
E        O6P43_009161 Transcription initiation factor TFIID subunit 8	K14649 TAF8; transcription initiation factor TFIID subunit 8 
E        O6P43_010265 transcription initiation factor TFIID subunit 8	K14649 TAF8; transcription initiation factor TFIID subunit 8 
E        O6P43_004390 Transcription initiation factor TFIID subunit 8	K14649 TAF8; transcription initiation factor TFIID subunit 8 
E        O6P43_006638 transcription initiation factor TFIID subunit 8	K14649 TAF8; transcription initiation factor TFIID subunit 8 
E        O6P43_027544 transcription initiation factor TFIID subunit 9	K03133 TAF9B; transcription initiation factor TFIID subunit 9B 
E        O6P43_018405 transcription initiation factor TFIID subunit 9	K03133 TAF9B; transcription initiation factor TFIID subunit 9B 
E        O6P43_019183 Transcription initiation factor TFIID subunit 10	K03134 TAF10; transcription initiation factor TFIID subunit 10 
E        O6P43_015808 Transcription initiation factor TFIID subunit 10	K03134 TAF10; transcription initiation factor TFIID subunit 10 
E        O6P43_026066 Transcription initiation factor TFIID subunit 11	K03135 TAF11; transcription initiation factor TFIID subunit 11 
E        O6P43_020613 transcription initiation factor TFIID subunit 11-like	K03135 TAF11; transcription initiation factor TFIID subunit 11 
E        O6P43_018370 Transcription initiation factor TFIID	K03126 TAF12; transcription initiation factor TFIID subunit 12 
E        O6P43_007233 Transcription initiation factor TFIID subunit 13	K03127 TAF13; transcription initiation factor TFIID subunit 13 
E        O6P43_010843 Transcription initiation factor TFIID subunit 13	K03127 TAF13; transcription initiation factor TFIID subunit 13 
D      TFIIE
E        O6P43_002299 General transcription factor IIE subunit 1	K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha 
E        O6P43_022998 transcription initiation factor IIE subunit alpha-like	K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha 
E        O6P43_024210 Transcription initiation factor IIE subunit beta	K03137 TFIIE2; transcription initiation factor TFIIE subunit beta 
E        O6P43_004864 Transcription initiation factor IIE subunit beta	K03137 TFIIE2; transcription initiation factor TFIIE subunit beta 
D      TFIIF
E        O6P43_029835 Transcription initiation factor IIF subunit alpha like	K03138 TFIIF1; transcription initiation factor TFIIF subunit alpha 
E        O6P43_008612 putative Transcription initiation factor IIF subunit beta	K03139 TFIIF2; transcription initiation factor TFIIF subunit beta [EC:5.6.2.-] 
E        O6P43_018633 transcription initiation factor IIF subunit beta-like	K03139 TFIIF2; transcription initiation factor TFIIF subunit beta [EC:5.6.2.-] 
E        O6P43_016232 transcription initiation factor IIF subunit beta-like	K03139 TFIIF2; transcription initiation factor TFIIF subunit beta [EC:5.6.2.-] 
D      TFIIH
E        O6P43_013449 BSD transcription factor	K03141 TFIIH1; transcription initiation factor TFIIH subunit 1 
E        O6P43_010057 General transcription factor IIH subunit	K03142 TFIIH2; transcription initiation factor TFIIH subunit 2 
E        O6P43_006350 General transcription factor IIH subunit	K03142 TFIIH2; transcription initiation factor TFIIH subunit 2 
E        O6P43_019746 putative General transcription factor IIH subunit	K03143 TFIIH3; transcription initiation factor TFIIH subunit 3 
E        O6P43_017765 RNA polymerase II transcription factor B subunit 2	K03144 TFIIH4; transcription initiation factor TFIIH subunit 4 
E        O6P43_034263 DNA repair helicase XPB1	K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] 
E        O6P43_007049 DNA repair helicase	K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] 
E        O6P43_016557 General transcription factor IIH subunit 5	K10845 TTDA; TFIIH basal transcription factor complex TTD-A subunit 
E        O6P43_026724 General transcription factor IIH subunit 5	K10845 TTDA; TFIIH basal transcription factor complex TTD-A subunit 
E        O6P43_008518 GPCR kinase	K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23] 
E        O6P43_005144 GPCR kinase	K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23] 
E        O6P43_022225 putative CDK-activating kinase assembly factor MAT1	K10842 MNAT1; CDK-activating kinase assembly factor MAT1 
E        O6P43_013702 Cyclin-H1-1-like protein	K06634 CCNH; cyclin H 
C    Mediator complex
D      Head
E        O6P43_018250 Mediator of RNA polymerase II transcription subunit 6	K15128 MED6; mediator of RNA polymerase II transcription subunit 6 
E        O6P43_027688 Mediator of RNA polymerase II transcription subunit 6	K15128 MED6; mediator of RNA polymerase II transcription subunit 6 
E        O6P43_011981 Mediator of RNA polymerase II transcription subunit 11	K15131 MED11; mediator of RNA polymerase II transcription subunit 11 
E        O6P43_011983 Mediator of RNA polymerase II transcription subunit 11	K15131 MED11; mediator of RNA polymerase II transcription subunit 11 
E        O6P43_031308 Mediator of RNA polymerase II transcription subunit 11	K15131 MED11; mediator of RNA polymerase II transcription subunit 11 
E        O6P43_002357 Mediator of RNA polymerase II transcription subunit 17	K15133 MED17; mediator of RNA polymerase II transcription subunit 17 
E        O6P43_009639 Mediator of RNA polymerase II transcription subunit 18	K15135 MED18; mediator of RNA polymerase II transcription subunit 18 
E        O6P43_022475 Mediator of RNA polymerase II transcription subunit 20	K13528 MED20; mediator of RNA polymerase II transcription subunit 20 
E        O6P43_022477 Mediator of RNA polymerase II transcription subunit 20	K13528 MED20; mediator of RNA polymerase II transcription subunit 20 
E        O6P43_001747 Mediator of RNA polymerase II transcription subunit	K15139 MED22; mediator of RNA polymerase II transcription subunit 22 
E        O6P43_029429 Mediator of RNA polymerase II transcription subunit	K15139 MED22; mediator of RNA polymerase II transcription subunit 22 
E        O6P43_007184 mediator of RNA polymerase II transcription subunit 28-like	K15141 MED28; mediator of RNA polymerase II transcription subunit 28 
E        O6P43_009619 mediator of RNA polymerase II transcription subunit 28-like	K15141 MED28; mediator of RNA polymerase II transcription subunit 28 
E        O6P43_010787 mediator of RNA polymerase II transcription subunit 28-like	K15141 MED28; mediator of RNA polymerase II transcription subunit 28 
D      Middle
E        O6P43_009431 Mediator of RNA polymerase II transcription subunit 7	K15148 MED7; mediator of RNA polymerase II transcription subunit 7 
E        O6P43_005786 Mediator of RNA polymerase II transcription subunit 7	K15148 MED7; mediator of RNA polymerase II transcription subunit 7 
E        O6P43_003071 Mediator of RNA polymerase II transcription subunit 10	K15151 MED10; mediator of RNA polymerase II transcription subunit 10 
E        O6P43_022118 Mediator of RNA polymerase II transcription subunit 10	K15151 MED10; mediator of RNA polymerase II transcription subunit 10 
E        O6P43_009015 mediator of RNA polymerase II transcription subunit 21-like	K15152 MED21; mediator of RNA polymerase II transcription subunit 21 
E        O6P43_004563 mediator of RNA polymerase II transcription subunit 21-like	K15152 MED21; mediator of RNA polymerase II transcription subunit 21 
E        O6P43_009222 Mediator of RNA polymerase II transcription subunit 31	K15153 MED31; mediator of RNA polymerase II transcription subunit 31 
D      Tail
E        O6P43_007634 mediator of RNA polymerase II transcription subunit 14	K15156 MED14; mediator of RNA polymerase II transcription subunit 14 
E        O6P43_011214 mediator of RNA polymerase II transcription subunit 14	K15156 MED14; mediator of RNA polymerase II transcription subunit 14 
D      CDK-module
E        O6P43_030250 Cyclin-dependent kinase	K02208 CDK8_11; cyclin-dependent kinase 8/11 [EC:2.7.11.22 2.7.11.23] 
E        O6P43_023415 Cyclin-dependent kinase	K02208 CDK8_11; cyclin-dependent kinase 8/11 [EC:2.7.11.22 2.7.11.23] 
E        O6P43_016930 Cyclin family protein	K15161 CCNC; cyclin-C 
E        O6P43_014431 Mediator of RNA polymerase II transcription subunit 13	K15164 MED13; mediator of RNA polymerase II transcription subunit 13 
D      Other mediators
E        O6P43_032517 mediator of RNA polymerase II transcription subunit 23	K15166 MED23; mediator of RNA polymerase II transcription subunit 23 
E        O6P43_025683 mediator of RNA polymerase II transcription subunit 25	K15168 MED25; mediator of RNA polymerase II transcription subunit 25 
E        O6P43_032780 Mediator of RNA polymerase II transcription subunit 25	K15168 MED25; mediator of RNA polymerase II transcription subunit 25 
E        O6P43_009666 mediator of RNA polymerase II transcription subunit 27	K15170 MED27; mediator of RNA polymerase II transcription subunit 27 
E        O6P43_009670 Mediator of RNA polymerase II transcription subunit 27	K15170 MED27; mediator of RNA polymerase II transcription subunit 27 
E        O6P43_001919 mediator of RNA polymerase II transcription subunit 32-like	K27471 MED32; mediator of RNA polymerase II transcription subunit 32 
C    Coactivators
D      SAGA/TFTC/STAGA complex
E        O6P43_010570 histone acetyltransferase GCN5	K06062 PCAF; histone acetyltransferase [EC:2.3.1.48] 
E        O6P43_006965 histone acetyltransferase GCN5	K06062 PCAF; histone acetyltransferase [EC:2.3.1.48] 
E        O6P43_024865 Transformation/transcription domain-associated protein	K08874 TRRAP; transformation/transcription domain-associated protein 
E        O6P43_033616 Transformation/transcription domain-associated protein	K08874 TRRAP; transformation/transcription domain-associated protein 
E        O6P43_012029 Transcriptional adapter	K11314 TADA2A; transcriptional adapter 2-alpha 
E        O6P43_014472 Transcriptional adapter	K11314 TADA2A; transcriptional adapter 2-alpha 
E        O6P43_031359 Transcriptional adapter	K11314 TADA2A; transcriptional adapter 2-alpha 
E        O6P43_022999 transcription initiation factor TFIID subunit 2	K03128 TAF2; transcription initiation factor TFIID subunit 2 
E        O6P43_013272 transcription initiation factor TFIID subunit 4b-like	K03129 TAF4; transcription initiation factor TFIID subunit 4 
E        O6P43_030219 transcription initiation factor TFIID subunit 4b-like	K03129 TAF4; transcription initiation factor TFIID subunit 4 
E        O6P43_015757 transcription initiation factor TFIID subunit 5	K03130 TAF5; transcription initiation factor TFIID subunit 5 
E        O6P43_014511 transcription initiation factor TFIID subunit 6	K03131 TAF6; transcription initiation factor TFIID subunit 6 
E        O6P43_021232 transcription initiation factor TFIID subunit 6-like	K03131 TAF6; transcription initiation factor TFIID subunit 6 
E        O6P43_014947 Transcription initiation factor TFIID subunit 7	K03132 TAF7; transcription initiation factor TFIID subunit 7 
E        O6P43_022014 Transcription initiation factor TFIID subunit 7	K03132 TAF7; transcription initiation factor TFIID subunit 7 
E        O6P43_027544 transcription initiation factor TFIID subunit 9	K03133 TAF9B; transcription initiation factor TFIID subunit 9B 
E        O6P43_018405 transcription initiation factor TFIID subunit 9	K03133 TAF9B; transcription initiation factor TFIID subunit 9B 
E        O6P43_019183 Transcription initiation factor TFIID subunit 10	K03134 TAF10; transcription initiation factor TFIID subunit 10 
E        O6P43_015808 Transcription initiation factor TFIID subunit 10	K03134 TAF10; transcription initiation factor TFIID subunit 10 
E        O6P43_018370 Transcription initiation factor TFIID	K03126 TAF12; transcription initiation factor TFIID subunit 12 
E        O6P43_020372 SAGA-associated factor 11	K11363 SGF11; SAGA-associated factor 11 
E        O6P43_014076 SAGA-associated factor 11	K11363 SGF11; SAGA-associated factor 11 
E        O6P43_008883 SGF29 tudor-like domain	K11364 SGF29; SAGA-associated factor 29 
E        O6P43_004709 SGF29 tudor-like domain	K11364 SGF29; SAGA-associated factor 29 
E        O6P43_021003 protein CHROMATIN REMODELING 5	K11367 CHD1; chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-] 
E        O6P43_014732 chromatin remodeling 5	K11367 CHD1; chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-] 
E        O6P43_004821 Transcription and mRNA export factor ENY2	K11368 ENY2; enhancer of yellow 2 transcription factor 
E        O6P43_002453 Ubiquitinyl hydrolase 1	K11366 USP22_27_51; ubiquitin carboxyl-terminal hydrolase 22/27/51 [EC:3.4.19.12] 
E        O6P43_015786 Ubiquitinyl hydrolase 1	K11366 USP22_27_51; ubiquitin carboxyl-terminal hydrolase 22/27/51 [EC:3.4.19.12] 
E        O6P43_009378 splicing factor 3B subunit 3-like	K12830 SF3B3; splicing factor 3B subunit 3 
E        O6P43_005726 splicing factor 3B subunit 3-like	K12830 SF3B3; splicing factor 3B subunit 3 
D      BAF/PBAF complex
E        O6P43_017641 ATP-dependent helicase BRM-like	K11647 SMARCA2_4; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-] 
E        O6P43_027247 ATP-dependent helicase BRM-like	K11647 SMARCA2_4; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-] 
E        O6P43_003760 chromatin structure-remodeling complex protein BSH	K11648 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 
E        O6P43_016398 SWI/SNF complex subunit SWI3B	K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C 
E        O6P43_023543 SWI/SNF complex subunit SWI3A	K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C 
E        O6P43_001914 SWI/SNF complex subunit SWI3D	K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C 
E        O6P43_011607 SWI/SNF complex subunit SWI3D	K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C 
E        O6P43_019776 SWI/SNF complex subunit SWI3C	K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C 
E        O6P43_015149 SWI/SNF complex subunit SWI3C	K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C 
E        O6P43_008812 SWI/SNF complex component SNF12 like	K11650 SMARCD; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D 
E        O6P43_030732 SWI/SNF complex component SNF12-like	K11650 SMARCD; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D 
E        O6P43_004815 SWI/SNF complex component SNF12 like	K11650 SMARCD; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D 
E        O6P43_022556 SWI/SNF complex component SNF12-like	K11650 SMARCD; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D 
E        O6P43_001957 Actin-related protein	K11340 ACTL6A; actin-like protein 6A 
D      SWI/SNF complex
E        O6P43_003760 chromatin structure-remodeling complex protein BSH	K11648 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 
D      RSC complex
D      Others
E        O6P43_024057 RNA polymerase II transcriptional coactivator KELP-like	K25815 SUB1; activated RNA polymerase II transcriptional coactivator p15 
E        O6P43_030233 RNA polymerase II transcriptional coactivator	K25815 SUB1; activated RNA polymerase II transcriptional coactivator p15 
E        O6P43_025488 Cell division cycle and apoptosis regulator protein 1	K25827 CCAR1; cell division cycle and apoptosis regulator protein 1 
E        O6P43_032989 cell division cycle and apoptosis regulator protein 1	K25827 CCAR1; cell division cycle and apoptosis regulator protein 1 
C    Other transcription-related factors
D      Transcription elongation factors
E        O6P43_020084 transcription elongation factor TFIIS	K03145 TFIIS; transcription elongation factor S-II 
E        O6P43_014856 transcription elongation factor TFIIS	K03145 TFIIS; transcription elongation factor S-II 
E        O6P43_032243 Transcription elongation factor SPT4-like	K15171 SUPT4H1; transcription elongation factor SPT4 
E        O6P43_027398 Transcription elongation factor SPT5	K15172 SUPT5H; transcription elongation factor SPT5 
E        O6P43_015077 Transcription elongation factor SPT5	K15172 SUPT5H; transcription elongation factor SPT5 
E        O6P43_009999 Transcription elongation factor SPT6-like protein	K11292 SUPT6H; transcription elongation factor SPT6 
E        O6P43_001554 Transcription elongation factor SPT6-like protein	K11292 SUPT6H; transcription elongation factor SPT6 
E        O6P43_006302 Transcription elongation factor spt6	K11292 SUPT6H; transcription elongation factor SPT6 
E        O6P43_006303 Transcription elongation factor spt6	K11292 SUPT6H; transcription elongation factor SPT6 
D      Transcription termination factor
E        O6P43_009520 polyadenylation and cleavage factor-like 4 isoform X1	K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11 
E        O6P43_011889 polyadenylation and cleavage factor-like 4-like	K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11 
E        O6P43_031220 polyadenylation and cleavage factor-like 4	K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11 
E        O6P43_005887 polyadenylation and cleavage factor-like 4-like	K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11 
E        O6P43_005484 Cleavage and polyadenylation specificity factor subunit 1	K14401 CPSF1; cleavage and polyadenylation specificity factor subunit 1 
E        O6P43_012203 Cleavage and polyadenylation specificity factor subunit 3	K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-] 
E        O6P43_031501 Cleavage and polyadenylation specificity factor subunit 3	K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-] 
E        O6P43_025987 30-kDa cleavage and polyadenylation specificity factor 30-like	K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4 
E        O6P43_001207 Nuclear fragile X mental retardation-interacting protein 1, conserved domain protein	K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4 
E        O6P43_029351 Nuclear fragile X mental retardation-interacting protein 1, conserved domain protein	K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4 
E        O6P43_013099 30-kDa cleavage and polyadenylation specificity factor 30-like	K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4 
E        O6P43_034284 Serine/threonine-protein phosphatase	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        O6P43_007472 Serine/threonine-protein phosphatase	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        O6P43_016426 Serine/threonine-protein phosphatase	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        O6P43_024125 Serine/threonine-protein phosphatase	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        O6P43_007687 Serine/threonine-protein phosphatase	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        O6P43_000164 Serine/threonine-protein phosphatase	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        O6P43_011081 Serine/threonine-protein phosphatase	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        O6P43_011265 Serine/threonine-protein phosphatase	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        O6P43_028176 Serine/threonine-protein phosphatase	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        O6P43_020658 Serine/threonine-protein phosphatase	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        O6P43_014376 Serine/threonine-protein phosphatase	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        O6P43_021424 Serine/threonine-protein phosphatase	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        O6P43_016600 symplekin	K06100 SYMPK; symplekin 
E        O6P43_019523 Symplekin	K06100 SYMPK; symplekin 
E        O6P43_008454 RNA polymerase II subunit A C-terminal domain phosphatase SSU72	K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16] 
E        O6P43_005234 RNA polymerase II subunit A C-terminal domain phosphatase SSU72	K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16] 
E        O6P43_018670 5'-3' exoribonuclease	K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-] 
E        O6P43_024426 Decapping nuclease DXO-like chloroplastic	K14845 RAI1; RAT1-interacting protein 
E        O6P43_009955 regulation of nuclear pre-mRNA domain-containing protein 1B-like	K15559 RTT103; regulator of Ty1 transposition protein 103 
E        O6P43_030431 Regulation of nuclear pre-mRNA domain-containing protein 1B	K15559 RTT103; regulator of Ty1 transposition protein 103 
E        O6P43_006068 regulation of nuclear pre-mRNA domain-containing protein 1B-like	K15559 RTT103; regulator of Ty1 transposition protein 103 
E        O6P43_006070 Regulation of nuclear pre-mRNA domain-containing protein 1B	K15559 RTT103; regulator of Ty1 transposition protein 103 
E        O6P43_006256 regulation of nuclear pre-mRNA domain-containing protein 1B-like	K15559 RTT103; regulator of Ty1 transposition protein 103 
E        O6P43_023250 Regulation of nuclear pre-mRNA domain-containing protein 1B	K15559 RTT103; regulator of Ty1 transposition protein 103 
E        O6P43_019672 p-loop containing nucleoside triphosphate hydrolase superfamily protein	K10706 SETX; ATP-dependent RNA/DNA helicase, senataxin [EC:5.6.2.5 5.6.2.3] 
E        O6P43_024851 Peptidyl-prolyl cis-trans isomerase	K09578 PIN1; peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [EC:5.2.1.8] 
E        O6P43_002054 Peptidyl-prolyl cis-trans isomerase	K09578 PIN1; peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [EC:5.2.1.8] 
E        O6P43_011527 Peptidyl-prolyl cis-trans isomerase	K09578 PIN1; peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [EC:5.2.1.8] 
E        O6P43_033626 Peptidyl-prolyl cis-trans isomerase	K09578 PIN1; peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [EC:5.2.1.8] 
D      PAF1 complex
E        O6P43_018216 RNA polymerase II-associated, Paf1	K15174 PAF1; RNA polymerase II-associated factor 1 
E        O6P43_027715 RNA polymerase II-associated, Paf1	K15174 PAF1; RNA polymerase II-associated factor 1 
E        O6P43_003341 PHP protein	K15175 CDC73; parafibromin 
E        O6P43_022478 Protein CTR9-like protein	K15176 CTR9; RNA polymerase-associated protein CTR9 
E        O6P43_002208 protein LEO1-like	K15177 LEO1; RNA polymerase-associated protein LEO1 
E        O6P43_022901 protein LEO1-like	K15177 LEO1; RNA polymerase-associated protein LEO1 
E        O6P43_011015 putative RNA polymerase-associated protein RTF1	K15178 RTF1; RNA polymerase-associated protein RTF1 
E        O6P43_031817 RNA polymerase-associated protein RTF1 like	K15178 RTF1; RNA polymerase-associated protein RTF1 
D      NELF complex
D      Super elongation complex (SEC)
E        O6P43_009322 Ell-associated factor Eaf like	K15186 EAF; ELL-associated factor 
E        O6P43_032635 putative ELL-associated factor	K15186 EAF; ELL-associated factor 
E        O6P43_034441 Cyclin T1	K15188 CCNT; cyclin T 
E        O6P43_001196 Cyclin T1	K15188 CCNT; cyclin T 
E        O6P43_018611 Cyclin family protein	K15188 CCNT; cyclin T 
E        O6P43_029342 Cyclin T1	K15188 CCNT; cyclin T 
E        O6P43_029343 Cyclin T1	K15188 CCNT; cyclin T 
E        O6P43_003389 Cyclin T1	K15188 CCNT; cyclin T 
E        O6P43_021588 Cyclin T1	K15188 CCNT; cyclin T 
D      Little elongation complex (LEC)
D      Brd4/P-TEFb complex
E        O6P43_034441 Cyclin T1	K15188 CCNT; cyclin T 
E        O6P43_001196 Cyclin T1	K15188 CCNT; cyclin T 
E        O6P43_018611 Cyclin family protein	K15188 CCNT; cyclin T 
E        O6P43_029342 Cyclin T1	K15188 CCNT; cyclin T 
E        O6P43_029343 Cyclin T1	K15188 CCNT; cyclin T 
E        O6P43_003389 Cyclin T1	K15188 CCNT; cyclin T 
E        O6P43_021588 Cyclin T1	K15188 CCNT; cyclin T 
D      BUR kinase complex
D      CTDK-I complex
D      7SK RNP complex
E        O6P43_007891 7SK snRNA methylphosphate capping enzyme	K15190 MEPCE; 7SK snRNA methylphosphate capping enzyme [EC:2.1.1.-] 
E        O6P43_003992 7SK snRNA methylphosphate capping enzyme	K15190 MEPCE; 7SK snRNA methylphosphate capping enzyme [EC:2.1.1.-] 
E        O6P43_000004 La-related protein 6B	K15191 LARP7; La-related protein 7 
E        O6P43_028042 La-related protein like	K15191 LARP7; La-related protein 7 
E        O6P43_011685 La-related protein like	K15191 LARP7; La-related protein 7 
E        O6P43_012960 La-related protein like	K15191 LARP7; La-related protein 7 
E        O6P43_031003 La-related protein like	K15191 LARP7; La-related protein 7 
E        O6P43_034441 Cyclin T1	K15188 CCNT; cyclin T 
E        O6P43_001196 Cyclin T1	K15188 CCNT; cyclin T 
E        O6P43_018611 Cyclin family protein	K15188 CCNT; cyclin T 
E        O6P43_029342 Cyclin T1	K15188 CCNT; cyclin T 
E        O6P43_029343 Cyclin T1	K15188 CCNT; cyclin T 
E        O6P43_003389 Cyclin T1	K15188 CCNT; cyclin T 
E        O6P43_021588 Cyclin T1	K15188 CCNT; cyclin T 
D      DBIRD complex
D      Others
E        O6P43_014007 TATA-binding protein-associated factor BTAF1	K15192 BTAF1; TATA-binding protein-associated factor [EC:5.6.2.-] 
E        O6P43_002290 Nuclear transcription factor Y subunit B	K21751 DR1; down-regulator of transcription 1 
E        O6P43_022982 Nuclear transcription factor Y subunit B	K21751 DR1; down-regulator of transcription 1 
E        O6P43_001547 Dr1-associated corepressor	K21752 DRAP1; Dr1-associated corepressor 
E        O6P43_029748 Dr1-associated corepressor	K21752 DRAP1; Dr1-associated corepressor 
E        O6P43_020912 Dr1-associated corepressor like	K21752 DRAP1; Dr1-associated corepressor 
E        O6P43_020914 Dr1-associated corepressor like	K21752 DRAP1; Dr1-associated corepressor 
E        O6P43_025168 protein SPT2-like	K15193 SPTY2D1; protein SPT2 
E        O6P43_034417 RNA polymerase II C-terminal domain phosphatase-like	K18998 CPL1_2; RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:3.1.3.16] 
E        O6P43_016620 RNA polymerase II C-terminal domain phosphatase-like	K18998 CPL1_2; RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:3.1.3.16] 
E        O6P43_026212 RNA polymerase II C-terminal domain phosphatase-like	K18998 CPL1_2; RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:3.1.3.16] 
E        O6P43_012617 RNA polymerase II C-terminal domain phosphatase-like 1	K18998 CPL1_2; RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:3.1.3.16] 
E        O6P43_031819 RNA polymerase II C-terminal domain phosphatase-like 1	K18998 CPL1_2; RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:3.1.3.16] 
E        O6P43_002996 RNA polymerase II C-terminal domain phosphatase-like 4	K18999 CPL3_4; RNA polymerase II C-terminal domain phosphatase-like 3/4 [EC:3.1.3.16] 
E        O6P43_030642 RNA polymerase II C-terminal domain phosphatase-like 3	K18999 CPL3_4; RNA polymerase II C-terminal domain phosphatase-like 3/4 [EC:3.1.3.16] 
E        O6P43_022181 RNA polymerase II C-terminal domain phosphatase-like 4	K18999 CPL3_4; RNA polymerase II C-terminal domain phosphatase-like 3/4 [EC:3.1.3.16] 
E        O6P43_016599 CTD small phosphatase-like protein	K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] 
E        O6P43_026228 CTD small phosphatase-like protein	K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] 
E        O6P43_012838 CTD small phosphatase-like protein	K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] 
E        O6P43_013856 CTD small phosphatase-like protein	K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] 
E        O6P43_032029 CTD small phosphatase-like protein	K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] 
E        O6P43_025102 transcription factor IWS1	K17498 SPN1; transcription factor SPN1 
E        O6P43_033371 transcription factor IWS1	K17498 SPN1; transcription factor SPN1 
E        O6P43_032081 Transcriptional elongation regulator MINIYO	K20826 RPAP1; RNA polymerase II-associated protein 1 
E        O6P43_005748 RNA polymerase II subunit B1 CTD phosphatase RPAP2	K20827 RPAP2; RNA polymerase II-associated protein 2 [EC:3.1.3.16] 
E        O6P43_007424 RNA polymerase II-associated protein 3	K23002 RPAP3; RNA polymerase II-associated protein 3 
E        O6P43_011031 RNA polymerase II-associated protein 3	K23002 RPAP3; RNA polymerase II-associated protein 3 
E        O6P43_017023 GPN-loop GTPase 3	K24104 GPN; GPN-loop GTPase 
E        O6P43_026760 GPN-loop GTPase 3	K24104 GPN; GPN-loop GTPase 
E        O6P43_019019 GPN-loop GTPase 2	K24104 GPN; GPN-loop GTPase 
E        O6P43_003458 GPN-loop GTPase	K24104 GPN; GPN-loop GTPase 
E        O6P43_021649 GPN-loop GTPase	K24104 GPN; GPN-loop GTPase 
B  RNA polymerase III system
C    RNA polymerase III
D      Core subunits
E        O6P43_028309 DNA-directed RNA polymerase subunit	K03018 RPC1; DNA-directed RNA polymerase III subunit RPC1 [EC:2.7.7.6] 
E        O6P43_029737 DNA-directed RNA polymerase subunit beta	K03021 RPC2; DNA-directed RNA polymerase III subunit RPC2 [EC:2.7.7.6] 
E        O6P43_013527 DNA-directed RNA polymerases I and III subunit like	K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1 
E        O6P43_021327 DNA-directed RNA polymerases I and III subunit like	K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1 
E        O6P43_000149 DNA-directed RNA polymerases I and III subunit like	K03020 RPAC2; DNA-directed RNA polymerases I and III subunit RPAC2 
E        O6P43_028160 DNA-directed RNA polymerases I and III subunit like	K03020 RPAC2; DNA-directed RNA polymerases I and III subunit RPAC2 
D      Pol III specific subunits
E        O6P43_008202 DNA-directed RNA polymerase III subunit RPC3	K03023 RPC3; DNA-directed RNA polymerase III subunit RPC3 
E        O6P43_004294 DNA-directed RNA polymerase III subunit RPC3	K03023 RPC3; DNA-directed RNA polymerase III subunit RPC3 
E        O6P43_001649 DNA-directed RNA polymerase III subunit RPC4	K03026 RPC4; DNA-directed RNA polymerase III subunit RPC4 
E        O6P43_029888 DNA-directed RNA polymerase III subunit RPC4	K03026 RPC4; DNA-directed RNA polymerase III subunit RPC4 
E        O6P43_022474 putative DNA-directed RNA polymerase III subunit RPC4	K03026 RPC4; DNA-directed RNA polymerase III subunit RPC4 
E        O6P43_022476 putative DNA-directed RNA polymerase III subunit RPC4	K03026 RPC4; DNA-directed RNA polymerase III subunit RPC4 
E        O6P43_033735 DNA-directed RNA polymerase III subunit RPC5	K14721 RPC5; DNA-directed RNA polymerase III subunit RPC5 
E        O6P43_013130 DNA-directed RNA polymerase III subunit RPC6	K03025 RPC6; DNA-directed RNA polymerase III subunit RPC6 
E        O6P43_027704 DNA-directed RNA polymerase III subunit	K03024 RPC7; DNA-directed RNA polymerase III subunit RPC7 
E        O6P43_005585 DNA-directed RNA polymerase III subunit RPC8	K03022 RPC8; DNA-directed RNA polymerase III subunit RPC8 
E        O6P43_003320 DNA-directed RNA polymerase III subunit rpc9-like	K25304 RPC9; DNA-directed RNA polymerase III subunit RPC9 
E        O6P43_027405 DNA-directed RNA polymerase subunit	K03019 RPC11; DNA-directed RNA polymerase III subunit RPC11 
D      Pol I, II, III common subunits
E        O6P43_007900 DNA-directed RNA polymerases II and IV subunit 5A	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        O6P43_010076 DNA-directed RNA polymerase, RPB5 subunit	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        O6P43_029681 putative DNA-directed RNA polymerase II	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        O6P43_003999 DNA-directed RNA polymerases II and IV subunit 5A-like	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        O6P43_006401 putative DNA-directed RNA polymerase II	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        O6P43_017039 DNA-directed RNA polymerases II and V subunit 6B	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        O6P43_008256 DNA-directed RNA polymerases II and V subunit 6B	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        O6P43_000040 DNA-directed RNA polymerases II and V subunit 8A-like	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        O6P43_030433 DNA-directed RNA polymerases II, IV and V subunit 8B-like	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        O6P43_023247 DNA-directed RNA polymerases II and V subunit 8A-like	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        O6P43_025279 DNA-directed RNA polymerases I/II/III subunit	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
E        O6P43_033182 DNA-directed RNA polymerases I/II/III subunit	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
C    Basal transcription factors
D      TFIIIA
E        O6P43_001489 Transcription factor IIIA	K09191 GTF3A; general transcription factor IIIA 
E        O6P43_001531 Transcription factor IIIA like	K09191 GTF3A; general transcription factor IIIA 
E        O6P43_029707 transcription factor IIIA-like	K09191 GTF3A; general transcription factor IIIA 
D      TFIIIB
E        O6P43_001817 TATA-box-binding protein	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        O6P43_003851 TATA-box-binding protein	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        O6P43_022043 TATA-box-binding protein	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        O6P43_012762 TFIIB transcription factor	K15196 BRF1; transcription factor IIIB 90 kDa subunit 
E        O6P43_031934 TFIIB transcription factor	K15196 BRF1; transcription factor IIIB 90 kDa subunit 
E        O6P43_006229 Transcription factor IIIB 90 kDa subunit	K15196 BRF1; transcription factor IIIB 90 kDa subunit 
E        O6P43_011572 Transcription factor TFIIIB component B	K15198 BDP1; transcription factor TFIIIB component B'' 
D      TFIIIC
E        O6P43_027568 putative B-block-binding subunit of tfiiic protein	K15199 GTF3C1; general transcription factor 3C polypeptide 1 
E        O6P43_005916 General transcription factor 3C polypeptide 2	K15200 GTF3C2; general transcription factor 3C polypeptide 2 
E        O6P43_022975 General transcription factor 3C polypeptide 2	K15200 GTF3C2; general transcription factor 3C polypeptide 2 
E        O6P43_016984 General transcription factor 3C polypeptide 3	K15201 GTP3C3; general transcription factor 3C polypeptide 3 (transcription factor C subunit 4) 
E        O6P43_013423 General transcription factor 3C polypeptide 3	K15201 GTP3C3; general transcription factor 3C polypeptide 3 (transcription factor C subunit 4) 
E        O6P43_013119 general transcription factor 3C polypeptide 5-like	K15202 GTF3C5; general transcription factor 3C polypeptide 5 (transcription factor C subunit 1) 
E        O6P43_029080 TFIIIC transcription factor	K15203 GTF3C6; general transcription factor 3C polypeptide 6 
D      TFIIIC, fungi type
E        O6P43_013119 general transcription factor 3C polypeptide 5-like	K15202 GTF3C5; general transcription factor 3C polypeptide 5 (transcription factor C subunit 1) 
E        O6P43_016984 General transcription factor 3C polypeptide 3	K15201 GTP3C3; general transcription factor 3C polypeptide 3 (transcription factor C subunit 4) 
E        O6P43_013423 General transcription factor 3C polypeptide 3	K15201 GTP3C3; general transcription factor 3C polypeptide 3 (transcription factor C subunit 4) 
C    Other transcription-related factors
D      snRNA-activating protein complex (SNAPc)
E        O6P43_002418 Small nuclear RNA activating complex (SNAPc), subunit SNAP43	K15208 SNAPC1; snRNA-activating protein complex subunit 1 
E        O6P43_012079 snRNA-activating protein complex subunit like	K15210 SNAPC3; snRNA-activating protein complex subunit 3 
D      Octamer transcription factors
D      Others
E        O6P43_032649 Repressor of RNA polymerase III transcription	K25817 MAF1; repressor of RNA polymerase III transcription MAF1 
B  RNA polymerase I system
C    RNA polymerase I
D      Core subunits
E        O6P43_006542 DNA-directed RNA polymerase subunit	K02999 RPA1; DNA-directed RNA polymerase I subunit RPA1 [EC:2.7.7.6] 
E        O6P43_001504 DNA-directed RNA polymerase subunit beta	K03002 RPA2; DNA-directed RNA polymerase I subunit RPA2 [EC:2.7.7.6] 
E        O6P43_013527 DNA-directed RNA polymerases I and III subunit like	K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1 
E        O6P43_021327 DNA-directed RNA polymerases I and III subunit like	K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1 
E        O6P43_000149 DNA-directed RNA polymerases I and III subunit like	K03020 RPAC2; DNA-directed RNA polymerases I and III subunit RPAC2 
E        O6P43_028160 DNA-directed RNA polymerases I and III subunit like	K03020 RPAC2; DNA-directed RNA polymerases I and III subunit RPAC2 
D      Pol I specific subunits
E        O6P43_027588 DNA-directed RNA polymerase I subunit rpa49	K03005 RPA49; DNA-directed RNA polymerase I subunit RPA49 
E        O6P43_019959 DNA-directed RNA polymerase subunit	K03000 RPA12; DNA-directed RNA polymerase I subunit RPA12 
D      Pol I, II, III common subunits
E        O6P43_007900 DNA-directed RNA polymerases II and IV subunit 5A	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        O6P43_010076 DNA-directed RNA polymerase, RPB5 subunit	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        O6P43_029681 putative DNA-directed RNA polymerase II	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        O6P43_003999 DNA-directed RNA polymerases II and IV subunit 5A-like	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        O6P43_006401 putative DNA-directed RNA polymerase II	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        O6P43_017039 DNA-directed RNA polymerases II and V subunit 6B	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        O6P43_008256 DNA-directed RNA polymerases II and V subunit 6B	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        O6P43_000040 DNA-directed RNA polymerases II and V subunit 8A-like	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        O6P43_030433 DNA-directed RNA polymerases II, IV and V subunit 8B-like	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        O6P43_023247 DNA-directed RNA polymerases II and V subunit 8A-like	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        O6P43_025279 DNA-directed RNA polymerases I/II/III subunit	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
E        O6P43_033182 DNA-directed RNA polymerases I/II/III subunit	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
C    Basal transcription factors
D      SL1/TIF-1B
E        O6P43_001817 TATA-box-binding protein	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        O6P43_003851 TATA-box-binding protein	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        O6P43_022043 TATA-box-binding protein	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
C    Other transcription-related factors
D      UBF
E        O6P43_034322 High mobility group B protein	K09273 UBTF; upstream-binding transcription factor 
D      Transcription initiation factors
E        O6P43_025614 RNA polymerase I-specific transcription initiation factor RRN3	K15216 RRN3; RNA polymerase I-specific transcription initiation factor RRN3 
E        O6P43_009881 RNA polymerase I-specific transcription initiation factor RRN3	K15216 RRN3; RNA polymerase I-specific transcription initiation factor RRN3 
E        O6P43_024685 upstream activation factor subunit spp27-like	K15223 UAF30; upstream activation factor subunit UAF30 
E        O6P43_011683 Upstream activation factor subunit spp27	K15223 UAF30; upstream activation factor subunit UAF30 
D      Transcription elongation factors
E        O6P43_032243 Transcription elongation factor SPT4-like	K15171 SUPT4H1; transcription elongation factor SPT4 
E        O6P43_027398 Transcription elongation factor SPT5	K15172 SUPT5H; transcription elongation factor SPT5 
E        O6P43_015077 Transcription elongation factor SPT5	K15172 SUPT5H; transcription elongation factor SPT5 
D      NoRC (nucleolar remodeling complex)
E        O6P43_003520 Chromatin-remodeling complex ATPase	K11654 SMARCA5; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-] 
E        O6P43_021705 Chromatin-remodeling complex ATPase	K11654 SMARCA5; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-] 
D      CTDK-I complex
D      Transcription termination factors
D      Others
#
A<b>Prokaryotic type</b>
B  Bacterial type
C    RNA polymerase
D      Core subunits
E        O6P43_034581 DNA-directed RNA polymerase subunit alpha	K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] 
E        O6P43_034647 DNA-directed RNA polymerase subunit alpha	K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] 
E        O6P43_034708 DNA-directed RNA polymerase subunit alpha	K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] 
E        O6P43_034820 DNA-directed RNA polymerase subunit alpha	K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] 
E        O6P43_034846 DNA-directed RNA polymerase subunit alpha	K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] 
E        O6P43_034956 DNA-directed RNA polymerase subunit alpha	K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] 
E        O6P43_034972 DNA-directed RNA polymerase subunit alpha	K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] 
E        O6P43_034978 DNA-directed RNA polymerase subunit alpha	K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] 
E        O6P43_034995 DNA-directed RNA polymerase subunit alpha	K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] 
E        O6P43_035103 DNA-directed RNA polymerase subunit alpha	K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] 
E        O6P43_035150 DNA-directed RNA polymerase subunit alpha	K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] 
E        O6P43_035196 DNA-directed RNA polymerase subunit alpha	K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] 
E        O6P43_035350 DNA-directed RNA polymerase subunit alpha	K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] 
E        O6P43_035604 DNA-directed RNA polymerase subunit alpha	K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] 
E        O6P43_035642 DNA-directed RNA polymerase subunit alpha	K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] 
E        O6P43_034671 DNA-directed RNA polymerase subunit beta	K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] 
E        O6P43_035025 DNA-directed RNA polymerase subunit beta	K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] 
E        O6P43_035175 DNA-directed RNA polymerase subunit beta	K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] 
E        O6P43_035314 DNA-directed RNA polymerase subunit beta	K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] 
E        O6P43_035315 DNA-directed RNA polymerase subunit beta	K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] 
E        O6P43_035341 DNA-directed RNA polymerase subunit beta	K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] 
E        O6P43_035894 DNA-directed RNA polymerase subunit beta	K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] 
E        O6P43_035173 DNA-directed RNA polymerase subunit beta''	K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] 
E        O6P43_035174 DNA-directed RNA polymerase subunit beta'	K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] 
E        O6P43_035399 DNA-directed RNA polymerase subunit beta''	K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] 
E        O6P43_035549 DNA-directed RNA polymerase subunit beta''	K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] 
E        O6P43_035601 DNA-directed RNA polymerase subunit beta''	K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] 
E        O6P43_035743 DNA-directed RNA polymerase subunit beta'	K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] 
D      Sigma factors
E        O6P43_030208 RNA polymerase sigma factor	K03086 rpoD; RNA polymerase primary sigma factor 
E        O6P43_019506 RNA polymerase sigma factor	K03093 sigI; RNA polymerase sigma-I factor 
E        O6P43_019889 RNA polymerase sigma factor	K03093 sigI; RNA polymerase sigma-I factor 
E        O6P43_015039 RNA polymerase sigma factor	K03093 sigI; RNA polymerase sigma-I factor 
C    Other transcription-related factors
D      RNA polymerase-associated proteins
D      Transcription elongation factors
D      Transcription termination factor
B  Archaeal type
C    RNA polymerase
D      Core subunits
C    Basal transcription factors
D      TFB
E        O6P43_010126 Transcription initiation factor IIB	K03124 TFIIB; transcription initiation factor TFIIB 
E        O6P43_004410 Transcription initiation factor IIB	K03124 TFIIB; transcription initiation factor TFIIB 
E        O6P43_006487 Transcription initiation factor IIB	K03124 TFIIB; transcription initiation factor TFIIB 
E        O6P43_033727 transcription initiation factor IIB	K03124 TFIIB; transcription initiation factor TFIIB 
D      TFE
E        O6P43_002299 General transcription factor IIE subunit 1	K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha 
E        O6P43_022998 transcription initiation factor IIE subunit alpha-like	K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha 
D      TFS
!
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#Last updated: April 9, 2024