+F Repair protein KO
#
DNA Repair and Recombination Proteins - Quillaja saponaria (soapbark tree)
%
!
AEukaryotic type
B SSBR (single strand breaks repair)
C Direct repair
D O6P43_012052 Alpha-ketoglutarate-dependent dioxygenase alkB K10859 ALKBH2; DNA oxidative demethylase [EC:1.14.11.33]
D O6P43_002212 DExH-box ATP-dependent RNA helicase K18663 ASCC3; activating signal cointegrator complex subunit 3 [EC:5.6.2.4]
D O6P43_034147 deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
C BER (base exicision repair)
D DNA glycosylases
E O6P43_026084 Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
E O6P43_009463 putative DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
E O6P43_017050 A/G-specific adenine DNA glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
E O6P43_017064 A/G-specific adenine DNA glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
E O6P43_017069 A/G-specific adenine DNA glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
E O6P43_019775 Proteasome subunit beta K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
E O6P43_015150 N-glycosylase/DNA lyase OGG1 K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
E O6P43_000083 Endonuclease III-like K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
E O6P43_030911 Protein ROS1 K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D AP endonucleases
E O6P43_033611 DNA-(apurinic or apyrimidinic site) lyase K10772 APEX2; AP endonuclease 2 [EC:3.1.11.2]
D Long Patch-BER factors
E DNA polymerase delta complex
F O6P43_030308 DNA polymerase K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
F O6P43_005838 DNA polymerase delta small subunit K02328 POLD2; DNA polymerase delta subunit 2
F O6P43_001066 DNA polymerase delta subunit like K03504 POLD3; DNA polymerase delta subunit 3
F O6P43_029207 DNA polymerase delta subunit like K03504 POLD3; DNA polymerase delta subunit 3
F O6P43_001708 DNA polymerase delta subunit 4 K03505 POLD4; DNA polymerase delta subunit 4
E DNA polymerase epsilon complex
F O6P43_008430 DNA polymerase epsilon subunit K02325 POLE2; DNA polymerase epsilon subunit 2 [EC:2.7.7.7]
F O6P43_000470 Nuclear transcription factor Y subunit B-3 K02326 POLE3; DNA polymerase epsilon subunit 3 [EC:2.7.7.7]
F O6P43_028533 DNA polymerase epsilon subunit 3 K02326 POLE3; DNA polymerase epsilon subunit 3 [EC:2.7.7.7]
E O6P43_020236 Proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen
E O6P43_013969 Proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen
E O6P43_013970 Proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen
E O6P43_007362 Flap endonuclease 1 K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
E O6P43_010967 Flap endonuclease 1 K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
E O6P43_028431 DNA ligase K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
D Short Patch-BER factors
E O6P43_018095 DNA-repair protein XRCC1 K10803 XRCC1; DNA-repair protein XRCC1
D Other BER factors
E O6P43_031205 Tyrosyl-DNA phosphodiesterase 1 K10862 TDP1; tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
E O6P43_026253 transcription factor bHLH K10863 APTX; aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
E O6P43_001043 polynucleotide 3'-phosphatase ZDP K08073 PNKP; bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78]
E O6P43_025346 DNA polymerase lambda K03512 POLL; DNA polymerase lambda [EC:2.7.7.7 4.2.99.-]
E O6P43_010533 Poly [ADP-ribose] polymerase K24070 PARP1; poly [ADP-ribose] polymerase 1 [EC:2.4.2.30]
E O6P43_007183 Poly [ADP-ribose] polymerase K10798 PARP2_3_4; poly [ADP-ribose] polymerase 2/3/4 [EC:2.4.2.30]
E O6P43_028517 Poly [ADP-ribose] polymerase K10798 PARP2_3_4; poly [ADP-ribose] polymerase 2/3/4 [EC:2.4.2.30]
C NER (nucleotide excision repair)
D GGR (global genome repair) factors
E XPC-HR23B-CETN2 complex
F O6P43_014291 DNA repair protein RAD4 K10838 XPC; xeroderma pigmentosum group C-complementing protein
F O6P43_017909 ubiquitin receptor RAD23b-like K10839 RAD23; UV excision repair protein RAD23
F O6P43_025701 ubiquitin receptor RAD23c-like K10839 RAD23; UV excision repair protein RAD23
F O6P43_027974 ubiquitin receptor RAD23b-like K10839 RAD23; UV excision repair protein RAD23
F O6P43_032759 ubiquitin receptor RAD23c-like K10839 RAD23; UV excision repair protein RAD23
E Cul4-DDB2 complex
F O6P43_027535 RING-box protein 1a K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F O6P43_018413 RING-box protein 1a-like K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F O6P43_002658 RING-box protein 1a K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F O6P43_022498 RING-box protein 1a K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F O6P43_012978 Cullin K10609 CUL4; cullin 4
F O6P43_032129 Cullin K10609 CUL4; cullin 4
F O6P43_013074 DNA damage-binding protein K10610 DDB1; DNA damage-binding protein 1
F O6P43_014034 damaged DNA binding 2 K10140 DDB2; DNA damage-binding protein 2
E NER4 complex
F O6P43_002669 F-box/LRR-repeat protein 13 K15082 RAD7; DNA repair protein RAD7
F O6P43_022485 F-box/LRR-repeat protein 13 K15082 RAD7; DNA repair protein RAD7
F O6P43_028664 putative DNA repair helicase rad5,16 K15083 RAD16; DNA repair protein RAD16
D TCR (transcription coupled repair) factors
E DNA-directed RNA polymerase II complex
F O6P43_024914 DNA-directed RNA polymerase subunit K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]
F O6P43_033562 DNA-directed RNA polymerase subunit K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]
F O6P43_031838 DNA-directed RNA polymerase subunit beta K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6]
F O6P43_031062 putative DNA-directed RNA polymerase II subunit K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3
F O6P43_012064 DNA-directed RNA polymerase II subunit 4 K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4
F O6P43_005238 DNA-directed RNA polymerase II subunit 4-like K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4
F O6P43_023290 DNA-directed RNA polymerase II subunit 4 K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4
F O6P43_007900 DNA-directed RNA polymerases II and IV subunit 5A K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
F O6P43_010076 DNA-directed RNA polymerase, RPB5 subunit K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
F O6P43_029681 putative DNA-directed RNA polymerase II K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
F O6P43_003999 DNA-directed RNA polymerases II and IV subunit 5A-like K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
F O6P43_006401 putative DNA-directed RNA polymerase II K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
F O6P43_017039 DNA-directed RNA polymerases II and V subunit 6B K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
F O6P43_008256 DNA-directed RNA polymerases II and V subunit 6B K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
F O6P43_020684 DNA-directed RNA polymerase II subunit RPB7 K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7
F O6P43_000040 DNA-directed RNA polymerases II and V subunit 8A-like K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
F O6P43_030433 DNA-directed RNA polymerases II, IV and V subunit 8B-like K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
F O6P43_023247 DNA-directed RNA polymerases II and V subunit 8A-like K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
F O6P43_003651 DNA-directed RNA polymerase subunit K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9
F O6P43_021837 DNA-directed RNA polymerase subunit K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9
F O6P43_025279 DNA-directed RNA polymerases I/II/III subunit K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5
F O6P43_033182 DNA-directed RNA polymerases I/II/III subunit K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5
F O6P43_029556 DNA-directed RNA polymerases II, IV and V subunit 11-like K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11
E Cul4-CSA complex
F O6P43_027535 RING-box protein 1a K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F O6P43_018413 RING-box protein 1a-like K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F O6P43_002658 RING-box protein 1a K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F O6P43_022498 RING-box protein 1a K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F O6P43_012978 Cullin K10609 CUL4; cullin 4
F O6P43_032129 Cullin K10609 CUL4; cullin 4
F O6P43_013074 DNA damage-binding protein K10610 DDB1; DNA damage-binding protein 1
F O6P43_019014 DNA excision repair protein ERCC-8 K10570 ERCC8; DNA excision repair protein ERCC-8
E Other TCR factor
F O6P43_010489 Protein CHROMATIN REMODELING K10841 ERCC6; DNA excision repair protein ERCC-6
F O6P43_017788 UV-stimulated scaffold protein A-like K23720 UVSSA; UV-stimulated scaffold protein A
F O6P43_027379 UV-stimulated scaffold protein A-like K23720 UVSSA; UV-stimulated scaffold protein A
F O6P43_012703 Transcription elongation factor 1-like K25829 ELOF1; transcription elongation factor 1
F O6P43_031897 Transcription elongation factor 1-like K25829 ELOF1; transcription elongation factor 1
D TFIIH complex
E O6P43_034263 DNA repair helicase XPB1 K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
E O6P43_007049 DNA repair helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
E O6P43_013449 BSD transcription factor K03141 TFIIH1; transcription initiation factor TFIIH subunit 1
E O6P43_010057 General transcription factor IIH subunit K03142 TFIIH2; transcription initiation factor TFIIH subunit 2
E O6P43_006350 General transcription factor IIH subunit K03142 TFIIH2; transcription initiation factor TFIIH subunit 2
E O6P43_019746 putative General transcription factor IIH subunit K03143 TFIIH3; transcription initiation factor TFIIH subunit 3
E O6P43_017765 RNA polymerase II transcription factor B subunit 2 K03144 TFIIH4; transcription initiation factor TFIIH subunit 4
E O6P43_016557 General transcription factor IIH subunit 5 K10845 TTDA; TFIIH basal transcription factor complex TTD-A subunit
E O6P43_026724 General transcription factor IIH subunit 5 K10845 TTDA; TFIIH basal transcription factor complex TTD-A subunit
E O6P43_008518 GPCR kinase K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
E O6P43_005144 GPCR kinase K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
E O6P43_013702 Cyclin-H1-1-like protein K06634 CCNH; cyclin H
E O6P43_022225 putative CDK-activating kinase assembly factor MAT1 K10842 MNAT1; CDK-activating kinase assembly factor MAT1
D RPA (replication factor A)
E O6P43_025064 Replication protein A subunit K07466 RFA1; replication factor A1
E O6P43_002222 Replication protein A subunit K07466 RFA1; replication factor A1
E O6P43_022468 Replication protein A subunit K07466 RFA1; replication factor A1
E O6P43_022915 Replication protein A subunit K07466 RFA1; replication factor A1
E O6P43_033421 Replication protein A subunit K07466 RFA1; replication factor A1
E O6P43_019358 replication protein A 32 kDa subunit A K10739 RFA2; replication factor A2
E O6P43_022320 replication protein A 32 kDa subunit A-like K10739 RFA2; replication factor A2
E O6P43_015598 replication protein A 32 kDa subunit A K10739 RFA2; replication factor A2
E O6P43_008746 replication protein A 14 kDa subunit B-like K10740 RPA3; replication factor A3
E O6P43_004885 replication protein A 14 kDa subunit B-like K10740 RPA3; replication factor A3
D Other NER factors
E O6P43_011131 DNA excision repair protein ERCC-1 K10849 ERCC1; DNA excision repair protein ERCC-1
E O6P43_024422 DNA repair endonuclease UVH1 K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-]
E O6P43_004594 DNA repair protein UVH3 K10846 ERCC5; DNA excision repair protein ERCC-5
E O6P43_028431 DNA ligase K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
E O6P43_018217 MMS19 nucleotide excision repair protein-like protein K15075 MET18; DNA repair/transcription protein MET18/MMS19
E O6P43_009072 Cullin K03869 CUL3; cullin 3
E O6P43_025449 Cullin K03869 CUL3; cullin 3
E O6P43_004496 Cullin K03869 CUL3; cullin 3
E O6P43_033031 Cullin K03869 CUL3; cullin 3
E O6P43_033032 putative Cullin K03869 CUL3; cullin 3
E O6P43_000161 Transcription elongation factor B polypeptide 1 K03872 ELOC; elongin-C
E O6P43_028174 Transcription elongation factor B polypeptide 1 K03872 ELOC; elongin-C
E O6P43_002968 Ubiquitin-like protein K03873 ELOB; elongin-B
E O6P43_022219 Ubiquitin-like protein K03873 ELOB; elongin-B
E O6P43_013763 transcription elongation factor B polypeptide 3-like K15077 ELA1; elongin-A
C MMR (mismatch excision repair)
D Mismatch and loop recognition factors
E O6P43_023001 putative DNA mismatch repair protein MSH2 K08735 MSH2; DNA mismatch repair protein MSH2
E O6P43_008234 DNA mismatch repair protein MSH3 K08736 MSH3; DNA mismatch repair protein MSH3
E O6P43_007943 DNA mismatch repair protein K08737 MSH6; DNA mismatch repair protein MSH6
E O6P43_010852 DNA mismatch repair protein K08737 MSH6; DNA mismatch repair protein MSH6
D MutL homologs
E O6P43_020676 DNA mismatch repair protein MLH1 K08734 MLH1; DNA mismatch repair protein MLH1
E O6P43_007160 DNA mismatch repair protein K10858 PMS2; DNA mismatch repair protein PMS2
E O6P43_024961 DNA mismatch repair protein MLH3 K08739 MLH3; DNA mismatch repair protein MLH3
D DNA polymerase delta complex
E O6P43_030308 DNA polymerase K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
E O6P43_005838 DNA polymerase delta small subunit K02328 POLD2; DNA polymerase delta subunit 2
E O6P43_001066 DNA polymerase delta subunit like K03504 POLD3; DNA polymerase delta subunit 3
E O6P43_029207 DNA polymerase delta subunit like K03504 POLD3; DNA polymerase delta subunit 3
E O6P43_001708 DNA polymerase delta subunit 4 K03505 POLD4; DNA polymerase delta subunit 4
D RPA (replication factor A)
E O6P43_025064 Replication protein A subunit K07466 RFA1; replication factor A1
E O6P43_002222 Replication protein A subunit K07466 RFA1; replication factor A1
E O6P43_022468 Replication protein A subunit K07466 RFA1; replication factor A1
E O6P43_022915 Replication protein A subunit K07466 RFA1; replication factor A1
E O6P43_033421 Replication protein A subunit K07466 RFA1; replication factor A1
E O6P43_019358 replication protein A 32 kDa subunit A K10739 RFA2; replication factor A2
E O6P43_022320 replication protein A 32 kDa subunit A-like K10739 RFA2; replication factor A2
E O6P43_015598 replication protein A 32 kDa subunit A K10739 RFA2; replication factor A2
E O6P43_008746 replication protein A 14 kDa subunit B-like K10740 RPA3; replication factor A3
E O6P43_004885 replication protein A 14 kDa subunit B-like K10740 RPA3; replication factor A3
D RFC (replication factor C)
E O6P43_028638 Replication factor C subunit 1 K10754 RFC1; replication factor C subunit 1
E O6P43_034206 Replication factor C subunit like K10755 RFC2_4; replication factor C subunit 2/4
E O6P43_023773 Replication factor C subunit K10755 RFC2_4; replication factor C subunit 2/4
E O6P43_024784 Replication factor C subunit 3 K10756 RFC3_5; replication factor C subunit 3/5
E O6P43_026815 Replication factor C subunit 3 K10756 RFC3_5; replication factor C subunit 3/5
E O6P43_006221 Replication factor C subunit 3 K10756 RFC3_5; replication factor C subunit 3/5
E O6P43_015158 Replication factor C subunit like K10756 RFC3_5; replication factor C subunit 3/5
E O6P43_033685 Replication factor C subunit 3 K10756 RFC3_5; replication factor C subunit 3/5
D Other MMR factors
E O6P43_020236 Proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen
E O6P43_013969 Proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen
E O6P43_013970 Proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen
E O6P43_005159 Exonuclease 1 K10746 EXO1; exonuclease 1 [EC:3.1.-.-]
E O6P43_028431 DNA ligase K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
E O6P43_022157 WD repeat-containing protein 76 K24755 WDR76; WD repeat-containing protein 76
B DSBR (double strand breaks repair)
C HR (homologous recombination)
D MRN(MRX) complex
E O6P43_000917 Double-strand break repair protein K10865 MRE11; double-strand break repair protein MRE11
E O6P43_023577 DNA repair protein RAD50 K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
E O6P43_020492 nijmegen breakage syndrome 1 protein K10867 NBN; nibrin
D BRCA1-core complex
E O6P43_010474 BRCA1-associated RING domain protein 1 K10683 BARD1; BRCA1-associated RING domain protein 1
E O6P43_006866 BRCA1-associated RING domain protein 1 K10683 BARD1; BRCA1-associated RING domain protein 1
D BRCA1-A complex
E O6P43_019077 BRISC and BRCA1-A complex member 1 K20776 BABAM; BRISC and BRCA1-A complex member 1
E O6P43_015925 BRISC and BRCA1-A complex member 1 K20776 BABAM; BRISC and BRCA1-A complex member 1
E O6P43_018688 BRCA1-A complex subunit BRE K12173 BRE; BRCA1-A complex subunit BRE
E O6P43_016276 BRCA1-A complex subunit BRE K12173 BRE; BRCA1-A complex subunit BRE
E O6P43_018052 Lys-63-specific deubiquitinase BRCC36 K11864 BRCC3; BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
D BRCA1-B complex
E O6P43_018779 Fanconi anemia group J protein-like protein K15362 BRIP1; fanconi anemia group J protein [EC:5.6.2.3]
E O6P43_007236 BRCT domain-containing protein K10728 TOPBP1; topoisomerase (DNA) II binding protein 1
E O6P43_010846 BRCT domain-containing protein K10728 TOPBP1; topoisomerase (DNA) II binding protein 1
E O6P43_015132 DNA topoisomerase 2-binding protein 1 K10728 TOPBP1; topoisomerase (DNA) II binding protein 1
D BRCA1-C complex
E O6P43_000917 Double-strand break repair protein K10865 MRE11; double-strand break repair protein MRE11
E O6P43_023577 DNA repair protein RAD50 K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
E O6P43_020492 nijmegen breakage syndrome 1 protein K10867 NBN; nibrin
D BRCA complex
E O6P43_016544 Protein BREAST CANCER SUSCEPTIBILITY 2 B like K08775 BRCA2; breast cancer 2 susceptibility protein
E O6P43_021973 DNA repair protein RAD51-like K04482 RAD51; DNA repair protein RAD51
D RecA family proteins
E O6P43_021973 DNA repair protein RAD51-like K04482 RAD51; DNA repair protein RAD51
E O6P43_028317 DNA repair (Rad51) family protein K10869 RAD51L1; RAD51-like protein 1
E O6P43_017433 DNA repair RAD51-like protein K10870 RAD51L2; RAD51-like protein 2
E O6P43_000253 DNA repair protein RAD51-like 4 K10871 RAD51L3; RAD51-like protein 3
E O6P43_026073 DNA repair protein XRCC2-like K10879 XRCC2; DNA-repair protein XRCC2
E O6P43_022310 DNA repair Rad51-like protein K10880 XRCC3; DNA-repair protein XRCC3
D Rad52 family proteins
E O6P43_029952 Cobalt ion binding protein K26556 RAD52-1; DNA repair RAD52-like protein 1, mitochondrial
E O6P43_003078 Cobalt ion-binding protein K26558 RAD52-2; DNA repair RAD52-like protein 2, chloroplastic
E O6P43_022111 Cobalt ion-binding protein K26558 RAD52-2; DNA repair RAD52-like protein 2, chloroplastic
D Rad54 family proteins
E O6P43_024431 SNF2 domain-containing protein CLASSY 4-like K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E O6P43_001867 protein CHROMATIN REMODELING 35-like K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E O6P43_002011 protein CHROMATIN REMODELING 35-like K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E O6P43_011561 protein CHROMATIN REMODELING 35-like K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E O6P43_011711 Protein CHROMATIN REMODELING like K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E O6P43_020150 SNF2 domain-containing protein CLASSY K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E O6P43_013801 SNF2 domain-containing protein CLASSY K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
D RecQ family DNA helicases
E O6P43_007440 ATP-dependent DNA helicase K10899 RECQL; ATP-dependent DNA helicase Q1 [EC:5.6.2.4]
E O6P43_025051 ATP-dependent DNA helicase K10899 RECQL; ATP-dependent DNA helicase Q1 [EC:5.6.2.4]
E O6P43_011098 ATP-dependent DNA helicase K10900 WRN; werner syndrome ATP-dependent helicase [EC:5.6.2.4]
E O6P43_002651 ATP-dependent DNA helicase K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E O6P43_031507 DNA helicase, ATP-dependent K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E O6P43_023885 DNA helicase, ATP-dependent K10730 RECQL4; ATP-dependent DNA helicase Q4 [EC:5.6.2.4]
D Bloom's syndrome complex (BTR)
E O6P43_002651 ATP-dependent DNA helicase K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E O6P43_031507 DNA helicase, ATP-dependent K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E O6P43_023610 DNA topoisomerase K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E O6P43_017841 DNA topoisomerase K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E O6P43_028616 DNA topoisomerase K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E O6P43_030229 DNA topoisomerase K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E O6P43_023544 RecQ-mediated genome instability protein 1 K10990 RMI1; RecQ-mediated genome instability protein 1
E O6P43_028463 recQ-mediated genome instability protein 2 K15365 RMI2; RecQ-mediated genome instability protein 2
D RPA (replication factor A)
E O6P43_025064 Replication protein A subunit K07466 RFA1; replication factor A1
E O6P43_002222 Replication protein A subunit K07466 RFA1; replication factor A1
E O6P43_022468 Replication protein A subunit K07466 RFA1; replication factor A1
E O6P43_022915 Replication protein A subunit K07466 RFA1; replication factor A1
E O6P43_033421 Replication protein A subunit K07466 RFA1; replication factor A1
E O6P43_019358 replication protein A 32 kDa subunit A K10739 RFA2; replication factor A2
E O6P43_022320 replication protein A 32 kDa subunit A-like K10739 RFA2; replication factor A2
E O6P43_015598 replication protein A 32 kDa subunit A K10739 RFA2; replication factor A2
E O6P43_008746 replication protein A 14 kDa subunit B-like K10740 RPA3; replication factor A3
E O6P43_004885 replication protein A 14 kDa subunit B-like K10740 RPA3; replication factor A3
D Protein phosphatase 4
E O6P43_013634 Serine/threonine-protein phosphatase K15423 PPP4C; serine/threonine-protein phosphatase 4 catalytic subunit [EC:3.1.3.16]
E O6P43_021231 Serine/threonine-protein phosphatase K15423 PPP4C; serine/threonine-protein phosphatase 4 catalytic subunit [EC:3.1.3.16]
E O6P43_001789 Serine/threonine-protein phosphatase 4 regulatory subunit 2 K15425 PPP4R2; serine/threonine-protein phosphatase 4 regulatory subunit 2
E O6P43_030130 Serine/threonine-protein phosphatase 4 regulatory subunit 2 K15425 PPP4R2; serine/threonine-protein phosphatase 4 regulatory subunit 2
E O6P43_003632 serine/threonine-protein phosphatase 4 regulatory subunit 3-like K17491 SMEK; protein phosphatase 4 regulatory subunit 3
E O6P43_021831 serine/threonine-protein phosphatase 4 regulatory subunit 3-like K17491 SMEK; protein phosphatase 4 regulatory subunit 3
D AP-5 complex
E O6P43_032334 AP-5 complex subunit beta-1 K19022 AP5B1; AP-5 complex subunit beta-1
E O6P43_003473 AP-5 complex subunit mu-like K19023 AP5M1; AP-5 complex subunit mu-1
E O6P43_000840 AP-5 complex subunit zeta-1 K19025 AP5Z1; AP-5 complex subunit zeta-1
D SMC5-SMC6 complex
E O6P43_001392 structural maintenance of chromosomes 5 K22803 SMC5; structural maintenance of chromosomes protein 5
E O6P43_029878 Structural maintenance of chromosomes protein 6 K22804 SMC6; structural maintenance of chromosomes protein 6
E O6P43_014604 Non-structural maintenance of chromosomes element 1-like K22817 NSMCE1; non-structural maintenance of chromosomes element 1 [EC:2.3.2.27]
E O6P43_029138 E3 SUMO-protein ligase MMS21 K22756 NSMCE2; E3 SUMO-protein ligase NSE2 [EC:2.3.2.-]
E O6P43_023730 Non-structural maintenance of chromosomes element 4 K22825 NSMCE4; non-structural maintenance of chromosomes element 4
E O6P43_009481 Non-structural maintenance of chromosomes element 4 K22825 NSMCE4; non-structural maintenance of chromosomes element 4
D Other HR factors
E O6P43_001431 crossover junction endonuclease MUS81 K08991 MUS81; crossover junction endonuclease MUS81 [EC:3.1.22.-]
E O6P43_030888 Dss1-1 protein K10881 SHFM1; 26 proteasome complex subunit DSS1
E O6P43_029612 Structure-specific endonuclease subunit slx1 K15078 SLX1; structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
E O6P43_014142 Structure-specific endonuclease subunit SLX1-like K15078 SLX1; structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
E O6P43_017544 Flap endonuclease GEN-like 1 K15338 GEN1; holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
E O6P43_008236 Flap endonuclease GEN-like 2 K15338 GEN1; holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
E O6P43_030395 Spatacsin K19026 SPG11; spatacsin
E O6P43_019381 Zinc finger FYVE domain protein K19027 ZFYVE26; zinc finger FYVE domain-containing protein 26
E O6P43_033864 MRG family protein isoform 1 K11339 MORF4L1; mortality factor 4-like protein 1
E O6P43_024592 MRG family protein isoform 1 K11339 MORF4L1; mortality factor 4-like protein 1
E O6P43_018971 MRG family protein, putative isoform 1 K11339 MORF4L1; mortality factor 4-like protein 1
E O6P43_016022 MRG family protein isoform 1 K11339 MORF4L1; mortality factor 4-like protein 1
E O6P43_025307 deoxynucleoside triphosphate triphosphohydrolase SAMHD1-like K22544 SAMHD1; deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
E O6P43_008984 deoxynucleoside triphosphate triphosphohydrolase SAMHD1-like K22544 SAMHD1; deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
E O6P43_033153 deoxynucleoside triphosphate triphosphohydrolase SAMHD1-like K22544 SAMHD1; deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
E O6P43_004816 Katanin p60 atpase-containing subunit a1 K22766 FIGNL1; fidgetin-like protein 1 [EC:5.6.2.-]
E O6P43_011793 zinc finger SWIM domain-containing protein 7 K25770 ZSWIM7; zinc finger SWIM domain-containing protein 7
E O6P43_005188 Nuclear localized protein K27803 HROB; homologous recombination OB-fold protein
E O6P43_010333 DNA helicase K10737 MCM8; DNA helicase MCM8 [EC:5.6.2.4]
E O6P43_012385 DNA helicase K10738 MCM9; DNA helicase MCM9 [EC:5.6.2.4]
E O6P43_023575 Werner Syndrome-like exonuclease K22807 WRNexo; werner syndrome-like exonuclease [EC:3.1.11.-]
E O6P43_017899 DNA-dependent metalloprotease WSS1-like K22685 WSS1; DNA-dependent metalloprotease WSS1 [EC:3.4.24.-]
E O6P43_021294 DNA-dependent metalloprotease WSS1-like K22685 WSS1; DNA-dependent metalloprotease WSS1 [EC:3.4.24.-]
E O6P43_025422 Single-stranded DNA-binding protein K26559 WHY1; single-stranded DNA-binding protein WHY1
E O6P43_033056 Single-stranded DNA-binding protein K26559 WHY1; single-stranded DNA-binding protein WHY1
E O6P43_011277 Single-stranded DNA-binding protein WHY2, mitochondrial K26561 WHY2; single-stranded DNA-binding protein WHY2
C NHEJ (non-homologous end-joining)
D DNA-PK complex
E O6P43_023644 ATP-dependent DNA helicase 2 subunit KU70 K10884 XRCC6; ATP-dependent DNA helicase 2 subunit 1
E O6P43_027094 ATP-dependent DNA helicase 2 subunit KU80 K10885 XRCC5; ATP-dependent DNA helicase 2 subunit 2
D MRX complex
E O6P43_000917 Double-strand break repair protein K10865 MRE11; double-strand break repair protein MRE11
E O6P43_023577 DNA repair protein RAD50 K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
D DNA Ligase 4 complex
E O6P43_002803 DNA ligase K10777 LIG4; DNA ligase 4 [EC:6.5.1.1]
E O6P43_003264 DNA repair protein XRCC4 K10886 XRCC4; DNA-repair protein XRCC4
D X-family DNA polymerases
E O6P43_025346 DNA polymerase lambda K03512 POLL; DNA polymerase lambda [EC:2.7.7.7 4.2.99.-]
D Other NHEJ factors
E O6P43_026253 transcription factor bHLH K10863 APTX; aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
E O6P43_011932 tyrosyl-DNA phosphodiesterase 2 K19619 TDP2; tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-]
E O6P43_031255 tyrosyl-DNA phosphodiesterase 2 K19619 TDP2; tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-]
E O6P43_014997 Protein defective in meristem silencing 3 K23113 SMCHD1; structural maintenance of chromosomes flexible hinge domain-containing protein 1
C FA (Fanconi anemia) pathway
D FA core complex
E O6P43_024504 E3 ubiquitin-protein ligase FANCL-like K10606 FANCL; E3 ubiquitin-protein ligase FANCL [EC:2.3.2.27]
E O6P43_030010 DEAD/DEAH box RNA helicase family protein K10896 FANCM; fanconi anemia group M protein
D FA core complex binding factors
E O6P43_030655 Centromere protein S-like K11511 APITD1; centromere protein S
E O6P43_030794 centromere protein X K15360 STRA13; centromere protein X
E O6P43_022620 Centromere protein X K15360 STRA13; centromere protein X
E O6P43_004037 Ubiquitin-conjugating enzyme, E2 K13960 UBE2T; ubiquitin-conjugating enzyme E2 T [EC:2.3.2.23]
D Bloom's syndrome complex (BTR)
E O6P43_002651 ATP-dependent DNA helicase K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E O6P43_031507 DNA helicase, ATP-dependent K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E O6P43_023610 DNA topoisomerase K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E O6P43_017841 DNA topoisomerase K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E O6P43_028616 DNA topoisomerase K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E O6P43_030229 DNA topoisomerase K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E O6P43_023544 RecQ-mediated genome instability protein 1 K10990 RMI1; RecQ-mediated genome instability protein 1
E O6P43_028463 recQ-mediated genome instability protein 2 K15365 RMI2; RecQ-mediated genome instability protein 2
D FANCD2-I complex
E O6P43_014393 Fanconi anemia group D2 protein-like K10891 FANCD2; fanconi anemia group D2 protein
E O6P43_021769 Fanconi anemia group I protein K10895 FANCI; fanconi anemia group I protein
D Downstream FA components
E O6P43_016544 Protein BREAST CANCER SUSCEPTIBILITY 2 B like K08775 BRCA2; breast cancer 2 susceptibility protein
E O6P43_018779 Fanconi anemia group J protein-like protein K15362 BRIP1; fanconi anemia group J protein [EC:5.6.2.3]
D Other FA pathway factors
E O6P43_002562 Fanconi-associated nuclease K15363 FAN1; fanconi-associated nuclease 1 [EC:3.1.21.- 3.1.4.1]
E O6P43_021973 DNA repair protein RAD51-like K04482 RAD51; DNA repair protein RAD51
E O6P43_017433 DNA repair RAD51-like protein K10870 RAD51L2; RAD51-like protein 2
E O6P43_030775 Telomere length regulation protein TEL2 like K11137 TELO2; telomere length regulation protein
E O6P43_007589 WD repeat-containing protein K15361 WDR48; WD repeat-containing protein 48
E O6P43_011169 WD repeat-containing protein K15361 WDR48; WD repeat-containing protein 48
C Other DSBR factors
D Protein phosphatase 6
E O6P43_026190 Serine/threonine-protein phosphatase K15498 PPP6C; serine/threonine-protein phosphatase 6 catalytic subunit [EC:3.1.3.16]
E O6P43_032246 Serine/threonine-protein phosphatase K15498 PPP6C; serine/threonine-protein phosphatase 6 catalytic subunit [EC:3.1.3.16]
E O6P43_000332 Serine/threonine-protein phosphatase 6 regulatory subunit 3 K15501 PPP6R3; serine/threonine-protein phosphatase 6 regulatory subunit 3
E O6P43_028378 Serine/threonine-protein phosphatase 6 regulatory subunit 3 K15501 PPP6R3; serine/threonine-protein phosphatase 6 regulatory subunit 3
E O6P43_013100 Serine/threonine-protein phosphatase 6 regulatory subunit 3 K15501 PPP6R3; serine/threonine-protein phosphatase 6 regulatory subunit 3
D Ubiquitin ligases
D Others
E O6P43_031771 telomerase Cajal body protein 1 K23314 WRAP53; telomerase Cajal body protein 1
E O6P43_010442 Transducin/WD40 repeat-like superfamily protein K24752 WDR70; WD repeat-containing protein 70
E O6P43_022157 WD repeat-containing protein 76 K24755 WDR76; WD repeat-containing protein 76
B TLS (translesion DNA synthesis) factors
C Y-family DNA polymerases
D O6P43_013383 DNA polymerase eta K03509 POLH; DNA polymerase eta [EC:2.7.7.7]
D O6P43_011820 DNA polymerase K03511 POLK; DNA polymerase kappa [EC:2.7.7.7]
D O6P43_031086 DNA repair protein REV1 K03515 REV1; DNA repair protein REV1 [EC:2.7.7.-]
C B-family DNA polymerases
D O6P43_011109 DNA polymerase K02350 REV3L; DNA polymerase zeta [EC:2.7.7.7]
C A-family DNA polymerase
C Rad6 epistasis group
D O6P43_033953 Ubiquitin-conjugating enzyme E2 2 K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
D O6P43_033969 Ubiquitin-conjugating enzyme E2 2 K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
D O6P43_024502 Ubiquitin-conjugating enzyme E2 2 K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
D O6P43_025426 Ubiquitin-conjugating enzyme, E2 K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
D O6P43_030964 Ubiquitin-conjugating enzyme, E2 K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
D O6P43_022811 Ubiquitin-conjugating enzyme, E2 K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
D O6P43_033053 Ubiquitin-conjugating enzyme E2 K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
D O6P43_000417 DNA/RNA helicase protein K15505 RAD5; DNA repair protein RAD5 [EC:5.6.2.-]
D O6P43_003250 DNA/RNA helicase protein K15505 RAD5; DNA repair protein RAD5 [EC:5.6.2.-]
D O6P43_010032 DNA/RNA helicase protein K15711 SMARCA3; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
D O6P43_010033 DNA/RNA helicase protein K15711 SMARCA3; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
D O6P43_010035 DNA/RNA helicase protein K15711 SMARCA3; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
D O6P43_006338 DNA/RNA helicase protein K15711 SMARCA3; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
D O6P43_009636 Ubiquitin-conjugating enzyme E2 K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant
D O6P43_032506 Ubiquitin-conjugating enzyme E2 K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant
D O6P43_006006 Ubiquitin-conjugating enzyme E2 K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant
D O6P43_001032 Ubiquitin-conjugating enzyme E2 K10580 UBE2N; ubiquitin-conjugating enzyme E2 N [EC:2.3.2.23]
D O6P43_029174 Ubiquitin-conjugating enzyme E2 K10580 UBE2N; ubiquitin-conjugating enzyme E2 N [EC:2.3.2.23]
C Other TLS factors
D O6P43_020236 Proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen
D O6P43_013969 Proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen
D O6P43_013970 Proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen
B Check point factors
C Rad9-Hus1-Rad1 complex
D O6P43_011093 cell cycle checkpoint control protein RAD9A K10994 RAD9A; cell cycle checkpoint control protein RAD9A [EC:3.1.11.2]
D O6P43_018002 Checkpoint protein K10903 HUS1; HUS1 checkpoint protein
D O6P43_033343 Cell cycle checkpoint protein RAD1 K02830 HRAD1; cell cycle checkpoint protein [EC:3.1.11.2]
C HRAD17(Rad24)-RFC complex
D O6P43_024893 cell cycle checkpoint protein RAD17 K06662 HRAD17; cell cycle checkpoint protein
D O6P43_034206 Replication factor C subunit like K10755 RFC2_4; replication factor C subunit 2/4
D O6P43_023773 Replication factor C subunit K10755 RFC2_4; replication factor C subunit 2/4
D O6P43_024784 Replication factor C subunit 3 K10756 RFC3_5; replication factor C subunit 3/5
D O6P43_026815 Replication factor C subunit 3 K10756 RFC3_5; replication factor C subunit 3/5
D O6P43_006221 Replication factor C subunit 3 K10756 RFC3_5; replication factor C subunit 3/5
D O6P43_015158 Replication factor C subunit like K10756 RFC3_5; replication factor C subunit 3/5
D O6P43_033685 Replication factor C subunit 3 K10756 RFC3_5; replication factor C subunit 3/5
C Rad17-Mec3-Ddc1 complex
D O6P43_033343 Cell cycle checkpoint protein RAD1 K02830 HRAD1; cell cycle checkpoint protein [EC:3.1.11.2]
C FPC (fork protection complex)
D O6P43_004231 Timeless protein K10997 TIMELESS; replication fork protection complex subunit TIMELESS/Tof1/Swi1
D O6P43_011355 TIMELESS-interacting protein K10998 TIPIN; replication fork protection complex subunit TIPIN/Csm3/Swi3
D O6P43_032303 TIMELESS-interacting protein K10998 TIPIN; replication fork protection complex subunit TIPIN/Csm3/Swi3
C Triple T complex
D O6P43_030775 Telomere length regulation protein TEL2 like K11137 TELO2; telomere length regulation protein
D O6P43_026157 ARM repeat superfamily protein K20403 TTI1; TELO2-interacting protein 1
D O6P43_013911 putative ARM repeat superfamily protein K23115 TTI2; TELO2-interacting protein 2
C BAG6-UBL4A-GET4 complex
D O6P43_023769 Large proline-rich protein bag6 K23390 BAG6; large proline-rich protein BAG6
D O6P43_008587 Golgi to ER traffic protein 4-like K23387 GET4; golgi to ER traffic protein 4
D O6P43_005077 Golgi to ER traffic protein 4-like K23387 GET4; golgi to ER traffic protein 4
C Other check point factors
D O6P43_011419 serine/threonine-protein kinase ATR K06640 ATR; serine/threonine-protein kinase ATR [EC:2.7.11.1]
D O6P43_022714 Serine/threonine-protein kinase ATM K04728 ATM; serine-protein kinase ATM [EC:2.7.11.1]
D O6P43_009270 14-3-3-like protein K06630 YWHAE; 14-3-3 protein epsilon
D O6P43_025542 14-3-3 protein K06630 YWHAE; 14-3-3 protein epsilon
D O6P43_000819 14-3-3 protein-like protein K06630 YWHAE; 14-3-3 protein epsilon
D O6P43_028910 14-3-3 protein-like protein K06630 YWHAE; 14-3-3 protein epsilon
D O6P43_029177 putative 14-3-3 protein K06630 YWHAE; 14-3-3 protein epsilon
D O6P43_019580 putative 14-3-3 protein K06630 YWHAE; 14-3-3 protein epsilon
D O6P43_019622 14-3-3-like protein K06630 YWHAE; 14-3-3 protein epsilon
D O6P43_019636 14-3-3-like protein K06630 YWHAE; 14-3-3 protein epsilon
D O6P43_005602 14-3-3-like protein K06630 YWHAE; 14-3-3 protein epsilon
D O6P43_031936 14-3-3 protein K06630 YWHAE; 14-3-3 protein epsilon
D O6P43_015311 putative 14-3-3 protein K06630 YWHAE; 14-3-3 protein epsilon
D O6P43_015313 putative 14-3-3 protein K06630 YWHAE; 14-3-3 protein epsilon
D O6P43_015326 14-3-3-like protein K06630 YWHAE; 14-3-3 protein epsilon
D O6P43_015369 14-3-3 protein K06630 YWHAE; 14-3-3 protein epsilon
D O6P43_032920 14-3-3 protein K06630 YWHAE; 14-3-3 protein epsilon
D O6P43_007140 wee1-like protein kinase K06632 WEE1; wee1-like protein kinase [EC:2.7.11.1]
D O6P43_003496 BRCT domain DNA repair protein K20780 MDC1; mediator of DNA damage checkpoint protein 1
D O6P43_021682 BRCT domain DNA repair protein K20780 MDC1; mediator of DNA damage checkpoint protein 1
D O6P43_007619 Kinase family protein K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D O6P43_000514 Serine/threonine-protein kinase K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D O6P43_010168 Serine/threonine-protein kinase Nek6 K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D O6P43_011197 Kinase family protein K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D O6P43_028578 Protein kinase K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D O6P43_006546 Serine/threonine-protein kinase Nek6 K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D O6P43_006993 Kinase family protein K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D O6P43_009405 Protein downstream neighbor of Son K22422 DONSON; protein downstream neighbor of Son
D O6P43_005758 Protein downstream neighbor of Son K22422 DONSON; protein downstream neighbor of Son
D O6P43_008729 Katanin p60 ATPase-containing subunit A1 K12196 VPS4; vacuolar protein-sorting-associated protein 4
D O6P43_000452 protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1-like K12196 VPS4; vacuolar protein-sorting-associated protein 4
D O6P43_028513 protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1-like K12196 VPS4; vacuolar protein-sorting-associated protein 4
D O6P43_017774 Splicing factor 3A subunit 3 K25059 SDE2; replication stress response regulator SDE2
D O6P43_027369 Protein SDE2-like protein K25059 SDE2; replication stress response regulator SDE2
D O6P43_018649 Guanine nucleotide-binding protein subunit beta-like protein 1 K24770 DSE1; protein decreased size exclusion limit 1
B Other factors with a suspected DNA repair function
C DNA polymerases
D O6P43_015542 helicase and polymerase-containing protein TEBICHI K02349 POLQ; DNA polymerase theta [EC:2.7.7.7]
D O6P43_012456 DNA polymerase V K02331 POL5; DNA polymerase phi [EC:2.7.7.7]
D O6P43_004251 DNA-directed primase/polymerase protein K22761 PRIMPOL; DNA-directed primase/polymerase protein [EC:2.7.7.102 2.7.7.7]
C Nucleases
D O6P43_009778 DNA cross-link repair protein K15340 DCLRE1A; DNA cross-link repair 1A protein
D O6P43_030332 DNA ligase-like K15340 DCLRE1A; DNA cross-link repair 1A protein
D O6P43_015822 DNA cross-link repair protein K15340 DCLRE1A; DNA cross-link repair 1A protein
D O6P43_028740 DNA repair metallo-beta-lactamase K15341 DCLRE1B; DNA cross-link repair 1B protein [EC:3.1.-.-]
D O6P43_000297 Exonuclease V chloroplastic K17815 EXO5; exonuclease V [EC:3.1.-.-]
D O6P43_019375 Endonuclease V-like protein K21813 ENDOV; endonuclease V [EC:3.1.26.-]
D O6P43_001998 DNA annealing helicase and endonuclease ZRANB3 K25861 ZRANB3; DNA annealing helicase and endonuclease ZRANB3 [EC:5.6.2.- 3.1.-.-]
D O6P43_025721 Endonuclease K05986 NUCS; nuclease S1 [EC:3.1.30.1]
D O6P43_012581 Endonuclease K05986 NUCS; nuclease S1 [EC:3.1.30.1]
D O6P43_012916 Endonuclease K05986 NUCS; nuclease S1 [EC:3.1.30.1]
D O6P43_031785 Endonuclease K05986 NUCS; nuclease S1 [EC:3.1.30.1]
D O6P43_032734 Endonuclease K05986 NUCS; nuclease S1 [EC:3.1.30.1]
C Helicases
D O6P43_000744 Switch 2 K20098 ERCC6L2; DNA excision repair protein ERCC-6-like 2 [EC:5.6.2.-]
C PSO4 complex
D O6P43_003156 pre-mRNA-processing factor 19-like K10599 PRPF19; pre-mRNA-processing factor 19 [EC:2.3.2.27]
D O6P43_022060 Pre-mRNA-processing factor 19 K10599 PRPF19; pre-mRNA-processing factor 19 [EC:2.3.2.27]
D O6P43_007684 Cell division cycle 5-like protein K12860 CDC5L; pre-mRNA-splicing factor CDC5/CEF1
D O6P43_011261 Cell division cycle 5-related protein K12860 CDC5L; pre-mRNA-splicing factor CDC5/CEF1
D O6P43_008510 Pre-mRNA-splicing factor SPF27 K12861 BCAS2; pre-mRNA-splicing factor SPF27
D O6P43_005154 Pre-mRNA-splicing factor SPF27 K12861 BCAS2; pre-mRNA-splicing factor SPF27
D O6P43_003574 protein pleiotropic regulatory locus 1 K12862 PLRG1; pleiotropic regulator 1
D O6P43_021763 protein pleiotropic regulatory locus 1 K12862 PLRG1; pleiotropic regulator 1
C Modulation of nucleotide pools
D O6P43_032810 nudix hydrolase 1 K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D O6P43_018827 deoxyuridine 5'-triphosphate nucleotidohydrolase-like K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D O6P43_016163 deoxyuridine 5'-triphosphate nucleotidohydrolase-like K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D O6P43_023312 Ribonucleoside-diphosphate reductase K10807 RRM1; ribonucleoside-diphosphate reductase subunit M1 [EC:1.17.4.1]
D O6P43_008765 putative Ribonucleoside-diphosphate reductase small chain K10808 RRM2; ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1]
D O6P43_003446 putative Ribonucleoside-diphosphate reductase small chain K10808 RRM2; ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1]
D O6P43_004869 Ribonucleoside-diphosphate reductase small chain K10808 RRM2; ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1]
D O6P43_021640 putative Ribonucleoside-diphosphate reductase small chain K10808 RRM2; ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1]
#
AProkaryotic type
B SSBR (single strand breaks repair)
C Direct repair
D O6P43_034147 deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
C BER (base exicision repair)
D DNA glycosylases
E O6P43_026084 Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
E O6P43_024768 DNA-3-methyladenine glycosylase K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
E O6P43_018582 putative DNA-3-methyladenine glycosylase K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
E O6P43_016177 putative DNA-3-methyladenine glycosylase K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
E O6P43_009463 putative DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
E O6P43_017050 A/G-specific adenine DNA glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
E O6P43_017064 A/G-specific adenine DNA glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
E O6P43_017069 A/G-specific adenine DNA glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
E O6P43_017940 putative DNA-3-methyladenine glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E O6P43_025591 putative DNA-3-methyladenine glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E O6P43_001273 putative DNA-3-methyladenine glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E O6P43_027946 putative DNA-3-methyladenine glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E O6P43_002987 Methyladenine glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E O6P43_029425 putative DNA-3-methyladenine glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E O6P43_022194 Methyladenine glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E O6P43_032863 putative DNA-3-methyladenine glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E O6P43_016143 putative DNA-3-methyladenine glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E O6P43_017998 Formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
E O6P43_000083 Endonuclease III-like K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
E O6P43_030911 Protein ROS1 K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D AP endonucleases
E O6P43_006454 DNA-(apurinic or apyrimidinic site) lyase K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D RecJ
D DNA ligase
D DNA polymerase I
E O6P43_021134 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
C NER (nucleotide excision repair)
D GGR (global genome repair) factors
E O6P43_021134 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D TCR (transcription coupled repair) factors
E DNA-directed RNA polymerase complex (RNAP)
F O6P43_034671 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
F O6P43_035025 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
F O6P43_035175 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
F O6P43_035314 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
F O6P43_035315 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
F O6P43_035341 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
F O6P43_035894 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
F O6P43_035173 DNA-directed RNA polymerase subunit beta'' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
F O6P43_035174 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
F O6P43_035399 DNA-directed RNA polymerase subunit beta'' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
F O6P43_035549 DNA-directed RNA polymerase subunit beta'' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
F O6P43_035601 DNA-directed RNA polymerase subunit beta'' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
F O6P43_035743 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
F O6P43_034581 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
F O6P43_034647 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
F O6P43_034708 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
F O6P43_034820 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
F O6P43_034846 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
F O6P43_034956 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
F O6P43_034972 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
F O6P43_034978 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
F O6P43_034995 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
F O6P43_035103 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
F O6P43_035150 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
F O6P43_035196 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
F O6P43_035350 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
F O6P43_035604 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
F O6P43_035642 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
E TRCF (transcription-repair coupling factor)
C MMR (mismatch excision repair)
D Mismatch and loop recognition factors
E O6P43_031830 DNA mismatch repair protein MutS2 K07456 mutS2; DNA mismatch repair protein MutS2
D Molecular matchmaker
D Strand discrimination factor
D DNA exonucleases
D DNA polymerase III holoenzyme
D DNA ligase
D Other MMR factors
E O6P43_022989 Single-stranded DNA-binding protein, mitochondrial K03111 ssb; single-strand DNA-binding protein
B DSBR (double strand breaks repair)
C HR (homologous recombination)
D RecBC pathway proteins
E O6P43_029314 putative DNA repair protein reca K03553 recA; recombination protein RecA
E O6P43_002745 DNA repair protein recA, mitochondrial K03553 recA; recombination protein RecA
E O6P43_022423 DNA repair protein recA, mitochondrial K03553 recA; recombination protein RecA
D RecFOR pathway proteins
E O6P43_029314 putative DNA repair protein reca K03553 recA; recombination protein RecA
E O6P43_002745 DNA repair protein recA, mitochondrial K03553 recA; recombination protein RecA
E O6P43_022423 DNA repair protein recA, mitochondrial K03553 recA; recombination protein RecA
E O6P43_027696 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
E O6P43_032612 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D AddAB pathway proteins
D Other HR factor
D Archaeal homologous recombinant proteins
C NHEJ (non-homologous end-joining)
D Two-component NHEJ DNA repair complex
D SHIIR (short-homology-independent illegitimate recombination)
E Facilitator
F O6P43_001581 DNA gyrase, subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
F O6P43_010045 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
F O6P43_006367 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
E Supressor
D SHDIR (short-homology-dependent illegitimate recombination)
E RecET pathway
E Facilitator
E Supressor
F O6P43_014185 ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
B TLS (translesion DNA synthesis) factors
C Y-family DNA polymerases
C Other SOS response factors
D O6P43_029314 putative DNA repair protein reca K03553 recA; recombination protein RecA
D O6P43_002745 DNA repair protein recA, mitochondrial K03553 recA; recombination protein RecA
D O6P43_022423 DNA repair protein recA, mitochondrial K03553 recA; recombination protein RecA
D O6P43_022989 Single-stranded DNA-binding protein, mitochondrial K03111 ssb; single-strand DNA-binding protein
B Other factors with a suspected DNA repair function
C DNA polymerase
C DNA helicases
C Modulation of nucleotide pools
D O6P43_032810 nudix hydrolase 1 K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D O6P43_018827 deoxyuridine 5'-triphosphate nucleotidohydrolase-like K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D O6P43_016163 deoxyuridine 5'-triphosphate nucleotidohydrolase-like K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
C Others
!
#
#[ BRITE | KEGG2 | KEGG ]
#Last updated: August 19, 2024