+E Transcription factors KO
#
Transcription Factors - Rahnella aceris Y9602
%
!
AEukaryotic type
B Basic leucine zipper (bZIP)
C AP-1(-like) components, Jun
C AP-1(-like) components, Fos
C AP-1(-like) components, Maf
C AP-1(-like) components, NF-E2
C AP-1(-like) components, Fungal regulators
C AP-1(-like) components, CRE-BP/ATF
C CREB
C C/EBP-like factors
C bZIP/PAR
C Plant bZIP factors
C ZIP only
B Basic helix-loop-helix (bHLH)
C Ubiquitous (class A) factors
C Myogenic transcription factors
C Achaete-Scute
C Tal/Twist/Atonal/Hen, Lymphoid factors
C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors
C Tal/Twist/Atonal/Hen, HEN
C Tal/Twist/Atonal/Hen, Mesp
C Tal/Twist/Atonal/Hen, Atonal
C Tal/Twist/Atonal/Hen, Pancreatic factors
C Hairy, Hairy/E(SPL)
C Hairy, Fungal regulators
C Factors with PAS domain
C Yabby
C INO
C HLH domain only
B Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
C Ubiquitous bHLH-ZIP factors
C Cell cycle controlling factors, Myc
C Cell cycle controlling factors, Mad/Max
C Other bHLH-ZIP factors
B Other basic domains
C NF-1
C RF-X
C AP-2 (bHSH)
B Zinc finger
C Cys4 thyroid hormone receptor-like
C Cys4 hepatocyte nuclear factor 4-like
C Cys4 estrogen receptor-like
C Cys4 nerve growth factor IB-like
C Cys4 Fushi tarazu-F1-like
C Cys4 germ cell nuclear factor
C Cys4 Knirps/DAX1-like
C Cys4 GATA-factors
C Cys2His2 SP/KLF family and related proteins
C Cys2His2 GLI-like
C Cys2His2 Snail
C Cys2His2 BTB-ZF factors
C Cys2His2 BED
C Cys2His2 PRDM
C Cys2His2 metabolic regulators in fungi
C Cys2His2 others
C Cys2HisCys zinc factors
C Cys3His zinc factors
C Cys2CysHis zinc factors
C CXXC CpG-binding proteins
D Rahaq_1788 C-5 cytosine-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
C Cys6 metabolic regulators in fungi
C Other zinc fingers
B Helix-turn-helix
C Homeo domain ANTP: HOXL
C Homeo domain ANTP: NKL
C Homeo domain Paired-related
C Homeo domain LIM
C Homeo domain POU
C Homeo domain SINE
C Homeo domain ZF
C Homeo domain CUT
C Homeo domain PROS
C Homeo domain TALE
C Homeo domain other
C Fork head/winged helix developmental regulators
C Fork head/winged helix tissue-specific regulators
C Fork head/winged helix cell cycle-controlling factors, E2F
C Fork head/winged helix cell cycle-controlling factors, DP
C Fork head/winged helix other regulators
C Heat shock factors
C Tryptophan clusters Myb, Myb-factors
C Tryptophan clusters Myb, Myb-like factors
C Tryptophan clusters Ets-type
C Tryptophan clusters interferon-regulating factors
C TEA domain
C ARID
B beta-Scaffold factors with minor groove contacts
C RHR (Rel homology region) Rel/Ankyrin
C RHR (Rel homology region) Ankyrin only
C RHR (Rel homology region) NF-AT
C STAT
C p53
C MADS-box regulators of differentiation, MEF-2
C MADS-box regulators of differentiation, Homeotic genes
C MADS-box regulators of differentiation, Yeast regulators
C MADS-box responders to external signals
C SAND domain-containing proteins
C TATA-binding proteins
C HMG SOX
C HMG TCF-1
C HMG2-related
C UBF
C Other HMG box factors
C Heteromeric CCAAT factors
C Grainyhead
C Cold-shock domain factors, DbpA-like
C Cold-shock domain factors, YB-1/DbpB-like
C Cold-shock domain factors, FRG Y2-like
C Runt
C MYRF
B Other transcription factors
C HMGI(Y)
C NUPR
E Line #4
C Pocket domain Rb
C Pocket domain CBP
C T-box
C DMRT
C LRRFIP
C TCP
C AP2/ERF
C WRKY
C LOB
C GRAS
C Copper-fist proteins fungal regulators
C Others
#
AProkaryotic type
B Helix-turn-helix
C AraC family
D Rahaq_2144 transcriptional regulator, AraC family K02099 araC; AraC family transcriptional regulator, arabinose operon regulatory protein
D Rahaq_3841 transcriptional regulator, AraC family K02854 rhaR; AraC family transcriptional regulator, L-rhamnose operon transcriptional activator RhaR
D Rahaq_4769 transcriptional regulator, AraC family K02855 rhaS; AraC family transcriptional regulator, L-rhamnose operon regulatory protein RhaS
D Rahaq_3842 transcriptional regulator, AraC family K02855 rhaS; AraC family transcriptional regulator, L-rhamnose operon regulatory protein RhaS
D Rahaq_4650 transcriptional regulator, AraC family K03490 chbR; AraC family transcriptional regulator, dual regulator of chb operon
D Rahaq_4491 transcriptional regulator, AraC family K13631 soxS; AraC family transcriptional regulator, mar-sox-rob regulon activator
D Rahaq_3803 transcriptional regulator, AraC family K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator
D Rahaq_4556 transcriptional regulator, AraC family K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator
D Rahaq_5138 transcriptional regulator, AraC family K18991 mtrA; AraC family transcriptional regulator, activator of mtrCDE
D Rahaq_0771 transcriptional regulator, AraC family K13652 K13652; AraC family transcriptional regulator
D Rahaq_4050 transcriptional regulator, AraC family K07506 K07506; AraC family transcriptional regulator
D Rahaq_0143 methylated-DNA/protein-cysteine methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D Rahaq_3470 Ada DNA repair protein and transcriptional regulator, AraC family K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D Rahaq_1826 transcriptional regulator, AraC family K13633 ftrA; AraC family transcriptional regulator, transcriptional activator FtrA
C LysR family
D Rahaq_3099 transcriptional regulator, LysR family K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D Rahaq_3119 transcriptional regulator, LysR family K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D Rahaq_4645 transcriptional regulator, LysR family K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D Rahaq_0848 transcriptional regulator, LysR family K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D Rahaq_4451 transcriptional regulator, LysR family K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D Rahaq_4270 transcriptional regulator, LysR family K02521 ilvY; LysR family transcriptional regulator, positive regulator for ilvC
D Rahaq_4176 transcriptional regulator, LysR family K03576 metR; LysR family transcriptional regulator, regulator for metE and metH
D Rahaq_3787 transcriptional regulator, LysR family K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA
D Rahaq_4295 transcriptional regulator, LysR family K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D Rahaq_3509 transcriptional regulator, ArgP, LysR family K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D Rahaq_3745 transcriptional regulator, LysR family K05798 leuO; LysR family transcriptional regulator, transcriptional activator for leuABCD operon
D Rahaq_0290 transcriptional regulator, LysR family K10972 allS; LysR family transcriptional regulator, transcriptional activator of the allD operon
D Rahaq_2604 transcriptional regulator, LysR family K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator
D Rahaq_2245 transcriptional regulator, LysR family K13635 cbl; LysR family transcriptional regulator, cys regulon transcriptional activator
D Rahaq_0239 transcriptional regulator, LysR family K13928 mdcR; LysR family transcriptional regulator, malonate utilization transcriptional regulator
D Rahaq_3052 transcriptional regulator, LysR family K14057 abgR; LysR family transcriptional regulator, regulator of abg operon
D Rahaq_1383 transcriptional regulator, LysR family K16135 dmlR; LysR family transcriptional regulator, transcriptional activator for dmlA
D Rahaq_2666 transcriptional regulator, LysR family K16516 galR; LysR family transcriptional regulator, regulator for genes of the gallate degradation pathway
D Rahaq_0963 transcriptional regulator, LysR family K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC
D Rahaq_3837 transcriptional regulator, LysR family K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC
D Rahaq_1673 transcriptional regulator, LysR family K19338 nac; LysR family transcriptional regulator, nitrogen assimilation regulatory protein
D Rahaq_2712 transcriptional regulator, LysR family K19338 nac; LysR family transcriptional regulator, nitrogen assimilation regulatory protein
D Rahaq_0093 transcriptional regulator, LysR family K21645 hypT; LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT
D Rahaq_4007 transcriptional regulator, LysR family K21698 aaeR; LysR family transcriptional regulator, transcriptional activator for aaeXAB operon
D Rahaq_2174 transcriptional regulator, LysR family K21699 bauR; LysR family transcriptional regulator, transcriptional activator for bauABCD operon
D Rahaq_4279 transcriptional regulator, LysR family K23773 hdfR; LysR family transcriptional regulator, flagellar master operon regulator
D Rahaq_2686 transcriptional regulator, LysR family K26290 palR; LysR family transcriptional regulator, regulator of pal gene cluster
C DeoR family
D Rahaq_3001 transcriptional regulator, DeoR family K11534 deoR; DeoR family transcriptional regulator, deoxyribose operon repressor
D Rahaq_0208 transcriptional regulator, DeoR family K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D Rahaq_5186 transcriptional regulator, DeoR family K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D Rahaq_3461 transcriptional regulator, DeoR family K02436 gatR; DeoR family transcriptional regulator, galactitol utilization operon repressor
D Rahaq_3495 transcriptional regulator, DeoR family K02430 fucR; DeoR family transcriptional regulator, L-fucose operon activator
D Rahaq_3679 transcriptional regulator, DeoR family K02468 srlR; DeoR family transcriptional regulator, glucitol operon repressor
D Rahaq_0214 transcriptional regulator, DeoR family K03477 ulaR; DeoR family transcriptional regulator, ulaG and ulaABCDEF operon transcriptional repressor
D Rahaq_4080 transcriptional regulator, DeoR family K27243 csqR; DeoR family transcriptional regulator, sulfoquinovose operon repressor
C LacI family
D Rahaq_3517 transcriptional regulator, LacI family K27069 lacI; LacI family transcriptional regulator, lactose operon repressor
D Rahaq_1593 transcriptional regulator, LacI family K27069 lacI; LacI family transcriptional regulator, lactose operon repressor
D Rahaq_0020 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D Rahaq_0825 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D Rahaq_1417 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D Rahaq_2575 transcriptional regulator, AraC family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D Rahaq_4396 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D Rahaq_0017 transcriptional regulator, LacI family K02525 kdgR; LacI family transcriptional regulator, kdg operon repressor
D Rahaq_4308 transcriptional regulator, LacI family K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
D Rahaq_3741 transcriptional regulator, LacI family K03435 fruR1; LacI family transcriptional regulator, fructose operon transcriptional repressor
D Rahaq_4815 transcriptional regulator, LacI family K03484 scrR; LacI family transcriptional regulator, sucrose operon repressor
D Rahaq_0521 transcriptional regulator, LacI family K03485 treR; LacI family transcriptional regulator, trehalose operon repressor
D Rahaq_2400 transcriptional regulator, LacI family K03487 ascG; LacI family transcriptional regulator, asc operon repressor
D Rahaq_2784 transcriptional regulator, LacI family K03604 purR; LacI family transcriptional regulator, purine nucleotide synthesis repressor
D Rahaq_0195 transcriptional regulator, LacI family K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
D Rahaq_4654 transcriptional regulator, LacI family K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
D Rahaq_1313 transcriptional regulator, LacI family K06146 idnR; LacI family transcriptional regulator, gluconate utilization system Gnt-II transcriptional activator
D Rahaq_0137 transcriptional regulator, LacI family K12113 ebgR; LacI family transcriptional regulator, ebg operon repressor
D Rahaq_2187 transcriptional regulator, LacI family K16136 malI; LacI family transcriptional regulator, maltose regulon regulatory protein
C GntR family
D Rahaq_0513 phosphonate C-P lyase system transcriptional regulator PhnF, GntR family K02043 phnF; GntR family transcriptional regulator, phosphonate transport system regulatory protein
D Rahaq_2157 transcriptional regulator, histidine utilization repressor, GntR family K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor
D Rahaq_2360 transcriptional regulator, histidine utilization repressor, GntR family K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor
D Rahaq_0811 transcriptional regulator, GntR family K11922 mngR; GntR family transcriptional regulator, mannosyl-D-glycerate transport/metabolism system repressor
D Rahaq_2422 transcriptional regulator, GntR family K03710 K03710; GntR family transcriptional regulator
D Rahaq_1900 transcriptional regulator, GntR family K03710 K03710; GntR family transcriptional regulator
D Rahaq_2019 fatty acid metabolism transcriptional regulator FadR K03603 fadR; GntR family transcriptional regulator, negative regulator for fad regulon and positive regulator of fabA
D Rahaq_3706 regulatory protein GntR HTH K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D Rahaq_1654 GntR domain protein K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D Rahaq_2123 GntR domain protein K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D Rahaq_1329 GntR domain protein K13637 uxuR; GntR family transcriptional regulator, uxu operon transcriptional repressor
D Rahaq_0823 GntR domain protein K13637 uxuR; GntR family transcriptional regulator, uxu operon transcriptional repressor
D Rahaq_2146 GntR domain protein K13637 uxuR; GntR family transcriptional regulator, uxu operon transcriptional repressor
D Rahaq_3926 GntR domain protein K19775 exuR; GntR family transcriptional regulator, hexuronate regulon transcriptional repressor
D Rahaq_2693 GntR domain protein K19776 dgoR; GntR family transcriptional regulator, galactonate operon transcriptional repressor
D Rahaq_1221 transcriptional regulator, GntR family with aminotransferase domain protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D Rahaq_0767 transcriptional regulator, GntR family with aminotransferase domain protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D Rahaq_4735 transcriptional regulator, GntR family with aminotransferase domain protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D Rahaq_2312 transcriptional regulator, GntR family K13654 mcbR; GntR family transcriptional regulator, colanic acid and biofilm gene transcriptional regulator
D Rahaq_1066 transcriptional regulator, GntR family K22293 rspR; GntR family transcriptional regulator, rspAB operon transcriptional repressor
C TetR/AcrR family
D Rahaq_1388 transcriptional repressor BetI K02167 betI; TetR/AcrR family transcriptional regulator, transcriptional repressor of bet genes
D Rahaq_3318 transcriptional regulator, TetR family K03577 acrR; TetR/AcrR family transcriptional regulator, acrAB operon repressor
D Rahaq_4359 regulatory protein TetR K05501 slmA; TetR/AcrR family transcriptional regulator
D Rahaq_3016 transcriptional regulator, TetR family K09017 rutR; TetR/AcrR family transcriptional regulator
D Rahaq_2218 transcriptional regulator, TetR family K09017 rutR; TetR/AcrR family transcriptional regulator
D Rahaq_0148 transcriptional regulator, TetR family K09017 rutR; TetR/AcrR family transcriptional regulator
D Rahaq_5181 regulatory protein TetR K19736 aefR; TetR/AcrR family transcriptional regulator, regulator of autoinduction and epiphytic fitness
D Rahaq_4480 transcriptional regulator, TetR family K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D Rahaq_1863 transcriptional regulator, TetR family K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D Rahaq_1901 regulatory protein TetR K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D Rahaq_1963 regulatory protein TetR K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D Rahaq_5022 regulatory protein TetR K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D Rahaq_3057 transcriptional regulator, TetR family K22041 comR; TetR/AcrR family transcriptional regulator, copper-responsive repressor
D Rahaq_4293 regulatory protein TetR K22105 fabR; TetR/AcrR family transcriptional regulator, fatty acid biosynthesis regulator
D Rahaq_4904 Transcriptional regulator TetR K23777 cecR; TetR/AcrR family transcriptional regulator, regulator of cefoperazone and chloramphenicol sensitivity
C Lrp/AsnC family
D Rahaq_4405 transcriptional regulator, AsnC family K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
D Rahaq_1450 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D Rahaq_2329 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D Rahaq_0791 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D Rahaq_3341 transcriptional regulator, AsnC family K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
C LuxR family
D Rahaq_4603 transcriptional regulator, LuxR family K07782 sdiA; LuxR family transcriptional regulator, quorum-sensing system regulator SdiA
D Rahaq_1931 regulatory protein LuxR K07781 rcsA; LuxR family transcriptional regulator, capsular biosynthesis positive transcription factor
D Rahaq_3809 regulatory protein LuxR K07781 rcsA; LuxR family transcriptional regulator, capsular biosynthesis positive transcription factor
D Rahaq_1143 transcriptional regulator, LuxR family K04333 csgD; LuxR family transcriptional regulator, csgAB operon transcriptional regulatory protein
D Rahaq_0533 ATP-dependent transcriptional regulator, MalT-like, LuxR family K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein
C MarR family
D Rahaq_2772 regulatory protein MarR K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D Rahaq_2192 regulatory protein MarR K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D Rahaq_0747 regulatory protein MarR K15974 emrR; MarR family transcriptional regulator, negative regulator of the multidrug operon emrRAB
D Rahaq_4634 transcriptional regulator, MarR family K22489 hosA; MarR family transcriptional regulator, temperature-dependent positive regulator of motility
D Rahaq_0080 transcriptional regulator, MarR family K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
C MerR family
D Rahaq_3299 transcriptional regulator, MerR family K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D Rahaq_0370 transcriptional regulator, MerR family K13638 zntR; MerR family transcriptional regulator, Zn(II)-responsive regulator of zntA
D Rahaq_3035 transcriptional regulator, MerR family K21972 bluR; MerR family transcriptional regulator, repressor of blue light- and temperature-responsive genes
C Fur family
D Rahaq_3179 ferric uptake regulator, Fur family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D Rahaq_4091 ferric uptake regulator, Fur family K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
C IclR family
D Rahaq_4112 transcriptional regulator, IclR family K13641 iclR; IclR family transcriptional regulator, acetate operon repressor
D Rahaq_0292 transcriptional regulator, IclR family K10973 allR; IclR family transcriptional regulator, negative regulator of allantoin and glyoxylate utilization operons
D Rahaq_2846 transcriptional regulator, IclR family K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
D Rahaq_3406 transcriptional regulator, IclR family K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
C CRP/FNR family
D Rahaq_0287 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D Rahaq_2253 transcriptional regulator, Crp/Fnr family K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
C Rrf2 family
D Rahaq_1035 transcriptional regulator, BadM/Rrf2 family K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D Rahaq_0433 transcriptional regulator, BadM/Rrf2 family K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
D Rahaq_4494 transcriptional regulator, BadM/Rrf2 family K19587 oqxR; Rrf2 family transcriptional regulator, repressor of oqxAB
C ArsR family
D Rahaq_5045 transcriptional regulator, ArsR family K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
C XRE family
D Rahaq_0101 mobile mystery protein A K23779 sutR; XRE family transcriptional regulator, regulator of sulfur utilization
D Rahaq_0058 transcriptional regulator, XRE family K23779 sutR; XRE family transcriptional regulator, regulator of sulfur utilization
C PadR family
C Other families
D Rahaq_4943 iron (metal) dependent repressor, DtxR family K11924 mntR; DtxR family transcriptional regulator, manganese transport regulator
D Rahaq_0989 transcriptional regulator, RpiR family K23238 rpiR; RpiR family transcriptional regulator, repressor of rpiB and als operon
D Rahaq_1997 transcriptional regulator, RpiR family K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator
D Rahaq_4143 bifunctional BirA, biotin operon repressor/biotin--acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D Rahaq_4026 transcriptional regulator, Fis family K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D Rahaq_3806 Trp operon repressor K03720 trpR; TrpR family transcriptional regulator, trp operon repressor
D Rahaq_0784 putative transcriptional regulator, Nlp K07724 ner; Ner family transcriptional regulator
D Rahaq_0466 putative transcriptional regulator, Nlp K07724 ner; Ner family transcriptional regulator
D Rahaq_3110 putative transcriptional regulator, Nlp K07724 ner; Ner family transcriptional regulator
D Rahaq_0804 putative transcriptional regulator, Nlp K07724 ner; Ner family transcriptional regulator
D Rahaq_2373 putative transcriptional regulator, Nlp K07724 ner; Ner family transcriptional regulator
D Rahaq_3753 extracellular solute-binding protein family 5 K11925 sgrR; SgrR family transcriptional regulator
D Rahaq_3815 transcriptional regulator, XRE family K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22]
D Rahaq_5058 helix-turn-helix domain protein K13655 mqsA; HTH-type transcriptional regulator / antitoxin MqsA
D Rahaq_1576 Cupin 2 conserved barrel domain protein K14056 puuR; HTH-type transcriptional regulator, repressor for puuD
D Rahaq_4720 helix-turn-helix domain protein K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB
D Rahaq_3832 helix-turn-helix domain protein K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB
D Rahaq_1165 transcriptional regulator, NifA subfamily, Fis Family K15836 fhlA; formate hydrogenlyase transcriptional activator
D Rahaq_3645 transcriptional regulator, CdaR K02647 cdaR; carbohydrate diacid regulator
D Rahaq_3116 transcriptional regulator, ModE family K02019 modE; molybdate transport system regulatory protein
D Rahaq_3393 transcriptional regulator, XRE family K07726 K07726; putative transcriptional regulator
D Rahaq_0199 transcriptional regulator, XRE family K07726 K07726; putative transcriptional regulator
B Ribbon-helix-helix
C CopG family
C Other families
D Rahaq_4305 methionine repressor, MetJ K03764 metJ; MetJ family transcriptional regulator, methionine regulon repressor
D Rahaq_2464 delta-1-pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
B Other transcription factors
C BglG family
D Rahaq_1726 transcriptional antiterminator, BglG K03488 licT; beta-glucoside operon transcriptional antiterminator
C Others
D Rahaq_2108 protein of unknown function DUF156 K23240 rcnR; FrmR/RcnR family transcriptional regulator, repressor of rcnA expression
D Rahaq_3354 BolA family protein K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D Rahaq_5074 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D Rahaq_4154 transcriptional acivator RfaH K05785 rfaH; transcriptional antiterminator RfaH
D Rahaq_0464 arginine repressor, ArgR K03402 argR; transcriptional regulator of arginine metabolism
D Rahaq_3891 arginine repressor, ArgR K03402 argR; transcriptional regulator of arginine metabolism
D Rahaq_3186 ROK family protein K02565 nagC; N-acetylglucosamine repressor
D Rahaq_2131 ROK family protein K15545 mlc; transcriptional regulator of PTS gene
D Rahaq_0035 mannitol repressor, MtlR K02562 mtlR; mannitol operon repressor
D Rahaq_2060 transcriptional regulator, TyrR K03721 tyrR; transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport
D Rahaq_3265 amino acid-binding ACT domain protein K03567 gcvR; glycine cleavage system transcriptional repressor
D Rahaq_2750 sigma54 specific transcriptional activator, PspF, Fis family K03974 pspF; psp operon transcriptional activator
D Rahaq_2747 phage shock protein C, PspC K03973 pspC; phage shock protein C
D Rahaq_2587 transcriptional regulator, DeoR family K11531 lsrR; lsr operon transcriptional repressor
D Rahaq_3995 GreA/GreB family elongation factor K06140 rnk; regulator of nucleoside diphosphate kinase
D Rahaq_1191 phage transcriptional regulator, AlpA K07733 alpA; prophage regulatory protein
D Rahaq_3543 protein of unknown function DUF179 K07735 algH; putative transcriptional regulator
D Rahaq_3662 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor
D Rahaq_3379 ATP-cone domain protein K07738 nrdR; transcriptional repressor NrdR
D Rahaq_0960 transcriptional regulator Crl K11926 crl; sigma factor-binding protein Crl
D Rahaq_3740 MraZ protein K03925 mraZ; transcriptional regulator MraZ
!
#
#[ BRITE | KEGG2 | KEGG ]
#Last updated: August 29, 2024
#
Classification taken and modified from TRANSFAC 7.0