+D GENES KO
#
KEGG Orthology (KO) - Rothia aeria
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:raj00010]
D RA11412_2397 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RA11412_2627 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D RA11412_1067 fructose-1,6-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D RA11412_0634 fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RA11412_1710 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D RA11412_0604 NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RA11412_1708 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RA11412_1709 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D RA11412_0014 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D RA11412_1035 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RA11412_1655 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RA11412_2129 pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D RA11412_2236 dihydrolipoamide acyltransferase component K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D RA11412_2234 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RA11412_1794 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D RA11412_1651 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D RA11412_0775 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RA11412_1418 polyphosphate glucokinase K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63]
D RA11412_0036 phosphoenolpyruvate carboxykinase K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D RA11412_1965 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D RA11412_0639 glucose-specific IIA component protein K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D RA11412_2612 sucrose-specific IIB component protein K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
C 00020 Citrate cycle (TCA cycle) [PATH:raj00020]
D RA11412_2260 dihydrolipoamide succinyltransferase component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D RA11412_2259 dihydrolipoamide succinyltransferase component K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
D RA11412_2234 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RA11412_0106 succinyl-CoA ligase alpha chain K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D RA11412_0107 succinyl-CoA ligase beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D RA11412_1027 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D RA11412_1028 succinate dehydrogenase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D RA11412_1025 succinate dehydrogenase cytochrome b-556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D RA11412_1026 succinate dehydrogenase hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D RA11412_1063 fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D RA11412_1523 quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D RA11412_0036 phosphoenolpyruvate carboxykinase K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D RA11412_2129 pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D RA11412_2236 dihydrolipoamide acyltransferase component K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:raj00030]
D RA11412_2397 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RA11412_1745 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D RA11412_1743 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D RA11412_2127 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D RA11412_2150 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D RA11412_1749 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RA11412_1747 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D RA11412_2048 ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D RA11412_1101 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D RA11412_0634 fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RA11412_1067 fructose-1,6-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D RA11412_2627 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C 00040 Pentose and glucuronate interconversions [PATH:raj00040]
D RA11412_2476 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D RA11412_2150 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D RA11412_2756 threonine dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
C 00051 Fructose and mannose metabolism [PATH:raj00051]
D RA11412_0606 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D RA11412_0029 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D RA11412_1024 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D RA11412_2627 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D RA11412_1067 fructose-1,6-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D RA11412_0165 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D RA11412_2756 threonine dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D RA11412_0634 fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RA11412_1710 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D RA11412_2048 ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D RA11412_0164 fructose-specific IIA component protein K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D RA11412_0516 mannose-specific IID component protein K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D RA11412_0515 mannose-specific IID component protein K02795 manY; mannose PTS system EIIC component
D RA11412_0514 mannose-specific IID component protein K02796 manZ; mannose PTS system EIID component
C 00052 Galactose metabolism [PATH:raj00052]
D RA11412_0502 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D RA11412_2384 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RA11412_2476 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D RA11412_2287 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D RA11412_2627 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D RA11412_2614 sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D RA11412_2487 oligo-1,6-glucosidase K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10]
D RA11412_2489 oligo-1,6-glucosidase K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10]
C 00053 Ascorbate and aldarate metabolism
C 00500 Starch and sucrose metabolism [PATH:raj00500]
D RA11412_2613 sucrose-specific IIB component protein K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D RA11412_2614 sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D RA11412_2476 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D RA11412_1965 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D RA11412_1114 hypothetical protein K16150 K16150; glycogen synthase [EC:2.4.1.11]
D RA11412_2487 oligo-1,6-glucosidase K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10]
D RA11412_2489 oligo-1,6-glucosidase K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10]
D RA11412_0639 glucose-specific IIA component protein K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D RA11412_2612 sucrose-specific IIB component protein K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D RA11412_2485 maltose and glucose-specific IIC component protein K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-]
D RA11412_2486 exodeoxyribonuclease III K06896 mapP; maltose 6'-phosphate phosphatase [EC:3.1.3.90]
D RA11412_0813 trehalose-6-phosphate hydrolase K01226 treC; trehalose-6-phosphate hydrolase [EC:3.2.1.93]
D RA11412_2397 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RA11412_0606 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:raj00520]
D RA11412_0639 glucose-specific IIA component protein K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D RA11412_2612 sucrose-specific IIB component protein K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D RA11412_0606 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D RA11412_2526 glucosamine-fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D RA11412_2530 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D RA11412_1099 N-acetylglucosamine-1-phosphate uridyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D RA11412_2101 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D RA11412_2658 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D RA11412_1108 N-acetylneuraminate cytidylyltransferase K15899 pseF; pseudaminic acid cytidylyltransferase [EC:2.7.7.81]
D RA11412_1418 polyphosphate glucokinase K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63]
D RA11412_2476 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D RA11412_0502 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D RA11412_2384 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RA11412_2287 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D RA11412_0516 mannose-specific IID component protein K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D RA11412_0515 mannose-specific IID component protein K02795 manY; mannose PTS system EIIC component
D RA11412_0514 mannose-specific IID component protein K02796 manZ; mannose PTS system EIID component
D RA11412_2397 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RA11412_0029 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D RA11412_1024 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
C 00620 Pyruvate metabolism [PATH:raj00620]
D RA11412_0775 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RA11412_2129 pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D RA11412_2236 dihydrolipoamide acyltransferase component K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D RA11412_2234 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RA11412_1651 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D RA11412_0584 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D RA11412_0669 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D RA11412_1655 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RA11412_1161 biotin carboxylase of acetyl-CoA carboxylase K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D RA11412_0770 putative acylphosphate phosphohydrolase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D RA11412_2766 L-lactate dehydrogenase K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3]
D RA11412_1794 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D RA11412_1931 predicted D-lactate dehydrogenase K18930 dld; D-lactate dehydrogenase
D RA11412_1523 quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D RA11412_1063 fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D RA11412_0036 phosphoenolpyruvate carboxykinase K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D RA11412_1936 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:raj00630]
D RA11412_0775 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RA11412_1161 biotin carboxylase of acetyl-CoA carboxylase K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D RA11412_1172 acetyl-coenzyme A carboxyl transferase alpha chain K27094 accD5; propionyl-/long chain acyl-CoA carboxylase carboxyl transferase subunit beta 5 [EC:6.4.1.3 6.4.1.- 2.1.3.15]
D RA11412_2673 catalase K03781 katE; catalase [EC:1.11.1.6]
D RA11412_2245 glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RA11412_1426 glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RA11412_1014 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RA11412_2590 glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D RA11412_2589 aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D RA11412_2234 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RA11412_1368 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D RA11412_2259 dihydrolipoamide succinyltransferase component K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
C 00640 Propanoate metabolism [PATH:raj00640]
D RA11412_0775 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RA11412_0584 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D RA11412_0669 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D RA11412_0194 pyruvate dehydrogenase E1 component alpha subunit K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D RA11412_0195 pyruvate dehydrogenase E1 component alpha subunit K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D RA11412_0193 pyruvate dehydrogenase E1 component beta subunit K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D RA11412_0191 dihydrolipoamide acetyltransferase component K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D RA11412_2234 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RA11412_1161 biotin carboxylase of acetyl-CoA carboxylase K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D RA11412_1819 gamma-aminobutyrate:alpha-ketoglutarate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D RA11412_1172 acetyl-coenzyme A carboxyl transferase alpha chain K27094 accD5; propionyl-/long chain acyl-CoA carboxylase carboxyl transferase subunit beta 5 [EC:6.4.1.3 6.4.1.- 2.1.3.15]
D RA11412_0107 succinyl-CoA ligase beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D RA11412_0106 succinyl-CoA ligase alpha chain K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D RA11412_1794 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
C 00650 Butanoate metabolism [PATH:raj00650]
D RA11412_1027 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D RA11412_1028 succinate dehydrogenase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D RA11412_1025 succinate dehydrogenase cytochrome b-556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D RA11412_1026 succinate dehydrogenase hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D RA11412_1819 gamma-aminobutyrate:alpha-ketoglutarate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D RA11412_1823 aldehyde dehydrogenase B K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D RA11412_0383 threonine dehydrogenase K18369 adh2; alcohol dehydrogenase [EC:1.1.1.-]
D RA11412_1530 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RA11412_1531 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D RA11412_2249 alpha-acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5]
D RA11412_0682 2,3-butanediol dehydrogenase K00004 BDH; (R,R)-butanediol dehydrogenase / meso-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.4 1.1.1.- 1.1.1.303]
C 00660 C5-Branched dibasic acid metabolism [PATH:raj00660]
D RA11412_1530 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RA11412_1531 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D RA11412_2249 alpha-acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5]
D RA11412_0107 succinyl-CoA ligase beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D RA11412_0106 succinyl-CoA ligase alpha chain K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D RA11412_2104 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D RA11412_2102 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D RA11412_1549 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism
D RA11412_1710 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:raj00190]
D RA11412_1041 NADH dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D RA11412_1027 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D RA11412_1028 succinate dehydrogenase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D RA11412_1025 succinate dehydrogenase cytochrome b-556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D RA11412_1026 succinate dehydrogenase hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D RA11412_1808 ubiquinol-cytochrome C reductase iron-sulfur subunit K03890 qcrA; quinol---cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D RA11412_1807 ubiquinol-cytochrome C reductase K03891 qcrB; quinol---cytochrome-c reductase cytochrome b subunit [EC:7.1.1.8]
D RA11412_1809 ubiquinol cytochrome C oxidoreductase K03889 qcrC; quinol---cytochrome-c reductase cytochrome c subunit [EC:7.1.1.8]
D RA11412_1752 heme O synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
D RA11412_1806 probable cytochrome C oxidase polypeptide 4 K27109 ctaF; cytochrome c oxidase subunit IV [EC:7.1.1.9]
D RA11412_1810 cytochrome C oxidase polypeptide III K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D RA11412_1805 cytochrome C oxidase polypeptide I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D RA11412_1803 cytochrome C oxidase polypeptide II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D RA11412_1753 cytochrome oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D RA11412_2216 cytochrome d ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D RA11412_2215 cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D RA11412_1473 ATP synthase alpha chain K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D RA11412_1475 ATP synthase beta chain K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D RA11412_1474 ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D RA11412_1472 ATP synthase delta chain K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D RA11412_1476 ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D RA11412_1469 ATP synthase F0 sector subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D RA11412_1471 ATP synthase F0 sector subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D RA11412_1470 ATP synthase F0 sector subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D RA11412_0692 inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D RA11412_2637 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D RA11412_2531 polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:raj00710]
D RA11412_1709 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D RA11412_0604 NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RA11412_1708 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RA11412_0634 fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RA11412_1067 fructose-1,6-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D RA11412_1749 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RA11412_2048 ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D RA11412_1710 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D RA11412_2150 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D RA11412_1747 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
C 00720 Other carbon fixation pathways [PATH:raj00720]
D RA11412_1063 fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D RA11412_1027 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D RA11412_1028 succinate dehydrogenase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D RA11412_1025 succinate dehydrogenase cytochrome b-556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D RA11412_1026 succinate dehydrogenase hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D RA11412_0106 succinyl-CoA ligase alpha chain K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D RA11412_0107 succinyl-CoA ligase beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D RA11412_1973 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D RA11412_1971 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D RA11412_1015 methylenetetrahydrofolate dehydrogenase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D RA11412_0318 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D RA11412_0669 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D RA11412_0584 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D RA11412_0775 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
C 00680 Methane metabolism [PATH:raj00680]
D RA11412_1014 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RA11412_1035 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RA11412_0634 fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RA11412_1067 fructose-1,6-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D RA11412_2627 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D RA11412_0584 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D RA11412_0669 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D RA11412_0775 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RA11412_0014 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 00910 Nitrogen metabolism [PATH:raj00910]
D RA11412_2591 nitrate/nitrite transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D RA11412_2592 nitrate/nitrite transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D RA11412_2597 respiratory nitrate reductase alpha chain K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D RA11412_2596 respiratory nitrate reductase beta chain K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D RA11412_2594 respiratory nitrate reductase gamma chain K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D RA11412_2028 nitrite reductase [NAD(P)H] large subunit K00362 nirB; nitrite reductase (NADH) large subunit [EC:1.7.1.15]
D RA11412_2026 nitrite reductase [NAD(P)H] small subunit K00363 nirD; nitrite reductase (NADH) small subunit [EC:1.7.1.15]
D RA11412_0304 multicopper oxidase K00368 nirK; nitrite reductase (NO-forming) [EC:1.7.2.1]
D RA11412_1697 nitric-oxide reductase K04561 norB; nitric oxide reductase subunit B [EC:1.7.2.5]
D RA11412_0592 NAD-specific glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D RA11412_2245 glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RA11412_1426 glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RA11412_1064 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
D RA11412_0381 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:raj00920]
D RA11412_0787 alkanesulfonates-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D RA11412_0786 alkanesulfonates transport system permease protein K15554 ssuC; sulfonate transport system permease protein
D RA11412_0788 alkanesulfonates ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D RA11412_2123 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D RA11412_2122 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D RA11412_1198 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D RA11412_0018 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:raj00061]
D RA11412_1161 biotin carboxylase of acetyl-CoA carboxylase K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D RA11412_1623 acyl carrier protein K02078 acpP; acyl carrier protein
D RA11412_1620 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D RA11412_1622 3-oxoacyl-[acyl-carrier-protein] synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D RA11412_1624 3-oxoacyl-[acyl-carrier-protein] synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D RA11412_1780 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RA11412_1781 enoyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RA11412_0185 long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RA11412_1318 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RA11412_1377 long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RA11412_2138 hypothetical protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:raj00071]
D RA11412_0185 long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RA11412_1318 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RA11412_1377 long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RA11412_2138 hypothetical protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RA11412_1651 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:raj00561]
D RA11412_1361 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D RA11412_1325 4-nitrophenylphosphatase K06117 E3.1.3.21; glycerol-1-phosphatase [EC:3.1.3.21]
D RA11412_1381 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D RA11412_1700 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D RA11412_2100 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D RA11412_0675 conserved protein K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
C 00564 Glycerophospholipid metabolism [PATH:raj00564]
D RA11412_2099 glycerol-3-phosphate dehydrogenase [NAD(P)+] K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D RA11412_1363 glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D RA11412_1381 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D RA11412_1700 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D RA11412_2100 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D RA11412_1138 glycerol-3-phosphate cytidylyltransferase K00980 tagD; glycerol-3-phosphate cytidylyltransferase [EC:2.7.7.39]
D RA11412_0675 conserved protein K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D RA11412_0640 glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D RA11412_1221 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D RA11412_1266 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D RA11412_0819 cardiolipin synthetase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
D RA11412_2054 Acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:raj00230]
D RA11412_1101 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D RA11412_0077 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D RA11412_0078 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D RA11412_0071 phosphoribosylamine-glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D RA11412_1011 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D RA11412_0847 phosphoribosylformylglycinamidine synthase K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]
D RA11412_0846 phosphoribosylformylglycinamidine synthase K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]
D RA11412_0849 phosphoribosylformylglycinamidine synthase K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3]
D RA11412_0848 phosphoribosylformylglycinamidine synthase K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D RA11412_0079 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D RA11412_1073 phosphoribosylaminoimidazole carboxylase ATPase subunit K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D RA11412_1071 phosphoribosylaminoimidazole carboxylase catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D RA11412_0069 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D RA11412_0205 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D RA11412_1012 IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D RA11412_1320 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D RA11412_1408 hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D RA11412_0699 hypoxanthine-guanine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D RA11412_2503 inosine-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D RA11412_2504 inosine-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D RA11412_2007 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D RA11412_1510 nucleoside 5-triphosphatase RdgB K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D RA11412_2497 GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D RA11412_1873 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D RA11412_1980 ribonucleotide reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D RA11412_1981 ribonucleotide reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D RA11412_1978 ribonucleotide reductase K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D RA11412_1207 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D RA11412_1905 GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D RA11412_1039 exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D RA11412_0936 exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D RA11412_1177 adenylate cyclase K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D RA11412_0259 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D RA11412_2547 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D RA11412_1923 HIT family protein K19710 E2.7.7.53; ATP adenylyltransferase [EC:2.7.7.53]
C 00240 Pyrimidine metabolism [PATH:raj00240]
D RA11412_1876 carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D RA11412_1877 carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D RA11412_1880 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D RA11412_1879 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D RA11412_1799 dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D RA11412_0626 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D RA11412_1875 orotidine-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D RA11412_1219 uridine monophosphate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D RA11412_2007 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D RA11412_1163 septum formation protein Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D RA11412_1332 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D RA11412_1344 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D RA11412_0221 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D RA11412_1881 uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D RA11412_2745 deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D RA11412_1980 ribonucleotide reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D RA11412_1981 ribonucleotide reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D RA11412_1978 ribonucleotide reductase K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D RA11412_0020 thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D RA11412_2195 deoxyuridine-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D RA11412_2642 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D RA11412_0043 nitroreductase K09019 rutE; 3-hydroxypropanoate dehydrogenase [EC:1.1.1.-]
D RA11412_0044 putative NADH dehydrogenase K09019 rutE; 3-hydroxypropanoate dehydrogenase [EC:1.1.1.-]
D RA11412_0045 putative NADH dehydrogenase K09019 rutE; 3-hydroxypropanoate dehydrogenase [EC:1.1.1.-]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:raj00250]
D RA11412_2626 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RA11412_2492 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D RA11412_0739 L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D RA11412_0778 putative asparagine synthetase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D RA11412_2464 aspartate aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D RA11412_0259 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D RA11412_0205 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D RA11412_1880 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D RA11412_1819 gamma-aminobutyrate:alpha-ketoglutarate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D RA11412_1823 aldehyde dehydrogenase B K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D RA11412_0592 NAD-specific glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D RA11412_1367 proline dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D RA11412_2245 glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RA11412_1426 glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RA11412_1876 carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D RA11412_1877 carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D RA11412_1990 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D RA11412_0848 phosphoribosylformylglycinamidine synthase K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D RA11412_2526 glucosamine-fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D RA11412_0077 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D RA11412_0078 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:raj00260]
D RA11412_0851 aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RA11412_2645 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D RA11412_1453 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D RA11412_1456 homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D RA11412_1454 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D RA11412_1014 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RA11412_0014 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D RA11412_2590 glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D RA11412_2589 aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D RA11412_2234 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RA11412_1368 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D RA11412_1821 4-aminobutyraldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8]
D RA11412_2588 L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D RA11412_1048 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D RA11412_1639 tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D RA11412_1638 tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:raj00270]
D RA11412_2123 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D RA11412_2122 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D RA11412_0319 5-methyltetrahydropteroyltriglutamate-homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D RA11412_1870 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D RA11412_1247 methylthioadenosine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D RA11412_1408 hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D RA11412_1246 S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D RA11412_0851 aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RA11412_2645 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D RA11412_1453 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D RA11412_1198 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D RA11412_0018 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D RA11412_0760 O-acetylhomoserine sulfhydrylase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D RA11412_1197 O-acetylhomoserine sulfhydrylase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D RA11412_1551 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RA11412_2626 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RA11412_1794 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D RA11412_2588 L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
C 00280 Valine, leucine and isoleucine degradation [PATH:raj00280]
D RA11412_1551 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RA11412_0194 pyruvate dehydrogenase E1 component alpha subunit K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D RA11412_0195 pyruvate dehydrogenase E1 component alpha subunit K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D RA11412_0193 pyruvate dehydrogenase E1 component beta subunit K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D RA11412_0191 dihydrolipoamide acetyltransferase component K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D RA11412_2234 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RA11412_1161 biotin carboxylase of acetyl-CoA carboxylase K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D RA11412_1172 acetyl-coenzyme A carboxyl transferase alpha chain K27094 accD5; propionyl-/long chain acyl-CoA carboxylase carboxyl transferase subunit beta 5 [EC:6.4.1.3 6.4.1.- 2.1.3.15]
D RA11412_1819 gamma-aminobutyrate:alpha-ketoglutarate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:raj00290]
D RA11412_1048 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D RA11412_2104 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D RA11412_2102 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D RA11412_1549 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D RA11412_1530 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RA11412_1531 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D RA11412_1533 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D RA11412_0814 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D RA11412_1551 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RA11412_2464 aspartate aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D RA11412_1936 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:raj00300]
D RA11412_1453 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D RA11412_0851 aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RA11412_2645 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D RA11412_1262 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D RA11412_1260 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D RA11412_2383 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D RA11412_2382 N-succinyl-L,L-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D RA11412_1281 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D RA11412_1451 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D RA11412_1393 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D RA11412_1394 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:raj00310]
D RA11412_2234 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RA11412_1819 gamma-aminobutyrate:alpha-ketoglutarate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D RA11412_1823 aldehyde dehydrogenase B K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00220 Arginine biosynthesis [PATH:raj00220]
D RA11412_1990 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D RA11412_0848 phosphoribosylformylglycinamidine synthase K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D RA11412_2245 glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RA11412_1426 glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RA11412_1876 carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D RA11412_1877 carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D RA11412_0592 NAD-specific glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D RA11412_2626 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RA11412_2464 aspartate aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D RA11412_0563 acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
C 00330 Arginine and proline metabolism [PATH:raj00330]
D RA11412_1825 monoamine/putrescine oxidase K03343 puo; putrescine oxidase [EC:1.4.3.10]
D RA11412_0962 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D RA11412_1367 proline dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D RA11412_0629 ornithine cyclodeaminase K01750 E4.3.1.12; ornithine cyclodeaminase [EC:4.3.1.12]
D RA11412_2626 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:raj00340]
D RA11412_1292 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K24017 priA; phosphoribosyl isomerase A [EC:5.3.1.16 5.3.1.24]
D RA11412_1290 imidazole glycerol phosphate synthase amidotransferase subunit K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D RA11412_0197 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RA11412_2267 histidinol-phosphatase K05602 hisN; histidinol-phosphatase [EC:3.1.3.15]
C 00350 Tyrosine metabolism [PATH:raj00350]
D RA11412_2626 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RA11412_0197 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RA11412_1651 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D RA11412_1823 aldehyde dehydrogenase B K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D RA11412_1955 fumarylacetoacetate hydrolase family protein K16164 K16164; acylpyruvate hydrolase [EC:3.7.1.5]
C 00360 Phenylalanine metabolism [PATH:raj00360]
D RA11412_2626 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RA11412_0197 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00380 Tryptophan metabolism [PATH:raj00380]
D RA11412_2234 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RA11412_2673 catalase K03781 katE; catalase [EC:1.11.1.6]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:raj00400]
D RA11412_1382 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase II K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D RA11412_1885 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D RA11412_0901 3-dehydroquinate dehydratase II K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D RA11412_1887 shikimate kinase I K00891 aroK; shikimate kinase [EC:2.7.1.71]
D RA11412_2265 5-Enolpyruvylshikimate-3-phosphate synthase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D RA11412_1888 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D RA11412_1634 anthranilate synthase K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D RA11412_1811 anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D RA11412_1292 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K24017 priA; phosphoribosyl isomerase A [EC:5.3.1.16 5.3.1.24]
D RA11412_1637 indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D RA11412_1639 tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D RA11412_1638 tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D RA11412_2306 chorismate mutase I K04092 tyrA1; chorismate mutase [EC:5.4.99.5]
D RA11412_1342 arogenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D RA11412_0672 prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D RA11412_2626 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RA11412_0197 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:raj00410]
D RA11412_1819 gamma-aminobutyrate:alpha-ketoglutarate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D RA11412_0715 pantoate-beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
C 00430 Taurine and hypotaurine metabolism [PATH:raj00430]
D RA11412_0592 NAD-specific glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D RA11412_0669 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D RA11412_0584 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:raj00450]
D RA11412_0018 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D RA11412_0319 5-methyltetrahydropteroyltriglutamate-homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D RA11412_1136 cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D RA11412_0468 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D RA11412_1538 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:raj00460]
D RA11412_0739 L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D RA11412_1014 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:raj00470]
D RA11412_2516 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D RA11412_2097 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RA11412_2137 hypothetical protein K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D RA11412_1990 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D RA11412_0848 phosphoribosylformylglycinamidine synthase K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D RA11412_1507 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D RA11412_1396 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D RA11412_2492 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D RA11412_1281 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D RA11412_1451 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:raj00480]
D RA11412_2508 hypothetical protein K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-]
D RA11412_2232 cytosol aminopeptidase PepA K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D RA11412_2050 membrane alanine aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D RA11412_1789 membrane alanine aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D RA11412_2127 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D RA11412_1745 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis [PATH:raj00515]
D RA11412_1079 conserved membrane protein K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
C 00514 Other types of O-glycan biosynthesis [PATH:raj00514]
D RA11412_1079 conserved membrane protein K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:raj00541]
D RA11412_2476 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D RA11412_2384 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RA11412_2287 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D RA11412_1124 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RA11412_1125 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D RA11412_1127 dTDP-4-dehydrorhamnose reductase K23987 rfbCD; dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:5.1.3.13 1.1.1.133]
D RA11412_1128 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D RA11412_0029 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D RA11412_1024 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D RA11412_1099 N-acetylglucosamine-1-phosphate uridyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D RA11412_1108 N-acetylneuraminate cytidylyltransferase K15899 pseF; pseudaminic acid cytidylyltransferase [EC:2.7.7.81]
C 00550 Peptidoglycan biosynthesis [PATH:raj00550]
D RA11412_2101 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D RA11412_2658 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D RA11412_1404 UDP-N-acetylmuramate-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D RA11412_1396 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D RA11412_1393 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D RA11412_2097 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RA11412_1394 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D RA11412_1798 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D RA11412_1934 undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D RA11412_1395 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D RA11412_1403 UDP-N-acetylglucosamine-N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D RA11412_1391 cell division protein FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D RA11412_1392 cell division protein FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D RA11412_0430 cell division protein FtsI K05364 pbpA; penicillin-binding protein A
D RA11412_0691 D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D RA11412_2528 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D RA11412_1919 proposed amino acid ligase K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
D RA11412_1918 putative amidotransferase K07009 gatD; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
C 00552 Teichoic acid biosynthesis [PATH:raj00552]
D RA11412_1934 undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D RA11412_2137 hypothetical protein K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D RA11412_1785 transcriptional regulator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:raj00543]
D RA11412_2123 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:raj00730]
D RA11412_1686 hydroxymethylpyrimidine phosphate kinase ThiD K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D RA11412_2308 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RA11412_2748 glycine oxidase ThiO K03153 thiO; glycine oxidase [EC:1.4.3.19]
D RA11412_2174 1-deoxy-D-xylulose 5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D RA11412_2750 thiazole biosynthesis protein thiG K03149 thiG; thiazole synthase [EC:2.8.1.10]
D RA11412_2747 thiamin-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D RA11412_2093 thiamine-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D RA11412_2266 ribosome small subunit-stimulated GTPase EngC K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D RA11412_2547 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:raj00740]
D RA11412_1632 GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D RA11412_1630 diaminohydroxyphosphoribosylaminopyrimidine deaminase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D RA11412_1044 HMP-PP hydrolase Cof K20861 ybjI; FMN hydrolase / 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.102 3.1.3.104]
D RA11412_1631 GTP cyclohydrolase II K02858 ribB; 3,4-dihydroxy 2-butanone 4-phosphate synthase [EC:4.1.99.12]
D RA11412_1633 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D RA11412_1245 riboflavin kinase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
C 00750 Vitamin B6 metabolism [PATH:raj00750]
D RA11412_1454 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D RA11412_0286 pyridoxine biosynthesis glutamine amidotransferase K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6]
D RA11412_0287 pyridoxine biosynthesis glutamine amidotransferase K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6]
D RA11412_0288 pyridoxine biosynthesis glutamine amidotransferase K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6]
C 00760 Nicotinate and nicotinamide metabolism [PATH:raj00760]
D RA11412_1504 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D RA11412_1997 nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D RA11412_2395 NADH pyrophosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D RA11412_0273 NAD synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D RA11412_1267 C-terminal domain of CinA type S K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D RA11412_1503 nicotinamidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D RA11412_1328 NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D RA11412_1823 aldehyde dehydrogenase B K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:raj00770]
D RA11412_1530 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RA11412_1531 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D RA11412_1533 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D RA11412_0814 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D RA11412_1421 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D RA11412_0715 pantoate-beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D RA11412_2527 pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33]
D RA11412_1871 phosphopantothenoylcysteine decarboxylase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D RA11412_2085 phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D RA11412_1669 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D RA11412_2525 holo-[acyl-carrier protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D RA11412_0133 hypothetical protein K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-]
D RA11412_1551 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
C 00780 Biotin metabolism [PATH:raj00780]
D RA11412_1624 3-oxoacyl-[acyl-carrier-protein] synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D RA11412_1780 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RA11412_1781 enoyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RA11412_1175 biotin-protein ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:raj00785]
D RA11412_2240 octanoate-[acyl-carrier-protein]-protein-N-octanoyltransferase K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D RA11412_2242 lipoate synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D RA11412_1958 lipoate-protein ligase A K16869 lipL; octanoyl-[GcvH]:protein N-octanoyltransferase [EC:2.3.1.204]
D RA11412_2234 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RA11412_2129 pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D RA11412_2236 dihydrolipoamide acyltransferase component K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D RA11412_2260 dihydrolipoamide succinyltransferase component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D RA11412_2259 dihydrolipoamide succinyltransferase component K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
D RA11412_0194 pyruvate dehydrogenase E1 component alpha subunit K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D RA11412_0195 pyruvate dehydrogenase E1 component alpha subunit K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D RA11412_0193 pyruvate dehydrogenase E1 component beta subunit K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D RA11412_0191 dihydrolipoamide acetyltransferase component K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D RA11412_2590 glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D RA11412_2589 aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D RA11412_1368 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:raj00790]
D RA11412_0711 dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D RA11412_0712 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D RA11412_0710 dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D RA11412_2643 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D RA11412_2010 dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D RA11412_2011 dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D RA11412_1632 GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D RA11412_0434 anthranilate synthase K01664 pabA; para-aminobenzoate synthetase component II [EC:2.6.1.85]
D RA11412_0620 para-aminobenzoate synthase K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85]
D RA11412_0982 aminodeoxychorismate lyase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D RA11412_2605 molybdenum cofactor biosynthesis protein MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D RA11412_2601 molybdenum cofactor biosynthesis protein MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D RA11412_2599 molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D RA11412_2609 molybdopterin biosynthesis protein MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D RA11412_2602 molybdopterin biosynthesis protein MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
C 00670 One carbon pool by folate [PATH:raj00670]
D RA11412_2643 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D RA11412_1973 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D RA11412_1971 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D RA11412_1015 methylenetetrahydrofolate dehydrogenase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D RA11412_1014 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RA11412_1011 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D RA11412_1012 IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D RA11412_2154 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D RA11412_2589 aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D RA11412_2642 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D RA11412_0318 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D RA11412_2477 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:raj00860]
D RA11412_1554 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RA11412_2703 glutamyl-Q-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RA11412_2361 glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D RA11412_2349 glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D RA11412_2351 porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D RA11412_2354 porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D RA11412_2353 uroporphyrinogen-III methyltransferase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D RA11412_2358 uroporphyrinogen III decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D RA11412_2357 protoporphyrinogen IX oxidase K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15]
D RA11412_2355 ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D RA11412_2029 uroporphyrinogen-III methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D RA11412_1752 heme O synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
D RA11412_1753 cytochrome oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D RA11412_0843 heme oxygenase K21480 HO; heme oxygenase (biliverdin-producing, ferredoxin) [EC:1.14.15.20]
D RA11412_0416 putative ferritin family protein K22336 bfrB; bacterioferritin B [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:raj00130]
D RA11412_2682 ubiquinone/menaquinone biosynthesis methyltransferase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D RA11412_0134 isochorismate synthase K02361 entC; isochorismate synthase [EC:5.4.4.2]
D RA11412_2693 O-succinylbenzoate synthase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113]
D RA11412_2728 O-succinylbenzoic acid--CoA ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26]
D RA11412_2726 naphthoate synthase K01661 menB; naphthoate synthase [EC:4.1.3.36]
D RA11412_2727 naphthoate synthase K01661 menB; naphthoate synthase [EC:4.1.3.36]
D RA11412_2730 1,4-dihydroxy-2-naphthoate polyprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:raj00900]
D RA11412_2174 1-deoxy-D-xylulose 5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D RA11412_1223 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D RA11412_0007 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D RA11412_1088 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D RA11412_0006 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D RA11412_1230 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D RA11412_2459 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D RA11412_1385 octaprenyl diphosphate synthase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D RA11412_1056 undecaprenyl diphosphate synthase K12503 uppS; short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68]
D RA11412_1798 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D RA11412_1749 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:raj00523]
D RA11412_1124 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RA11412_1125 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D RA11412_1128 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D RA11412_1127 dTDP-4-dehydrorhamnose reductase K23987 rfbCD; dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:5.1.3.13 1.1.1.133]
C 01054 Nonribosomal peptide structures [PATH:raj01054]
D RA11412_2492 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
C 01053 Biosynthesis of siderophore group nonribosomal peptides [PATH:raj01053]
D RA11412_0134 isochorismate synthase K02361 entC; isochorismate synthase [EC:5.4.4.2]
D RA11412_0135 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase K00216 entA; 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase [EC:1.3.1.28]
D RA11412_2141 2,3-dihydroxybenzoate-AMP ligase K02363 entE; 2,3-dihydroxybenzoate---[aryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.71]
C 01055 Biosynthesis of vancomycin group antibiotics
D RA11412_1125 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis
C 00261 Monobactam biosynthesis [PATH:raj00261]
D RA11412_0851 aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RA11412_2645 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D RA11412_1262 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D RA11412_1260 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:raj00521]
D RA11412_1124 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RA11412_1125 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D RA11412_1128 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D RA11412_1127 dTDP-4-dehydrorhamnose reductase K23987 rfbCD; dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:5.1.3.13 1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
C 00525 Acarbose and validamycin biosynthesis [PATH:raj00525]
D RA11412_1124 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RA11412_1125 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:raj00401]
D RA11412_1342 arogenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D RA11412_2626 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RA11412_0197 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D RA11412_1634 anthranilate synthase K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D RA11412_1620 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D RA11412_1780 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RA11412_1781 enoyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D RA11412_1623 acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites
D RA11412_1870 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation
D RA11412_0040 ferredoxin 2Fe-2S K04755 fdx; ferredoxin, 2Fe-2S
C 00627 Aminobenzoate degradation
D RA11412_0770 putative acylphosphate phosphohydrolase K01512 acyP; acylphosphatase [EC:3.6.1.7]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:raj00625]
D RA11412_1651 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation [PATH:raj00626]
D RA11412_1651 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:raj03020]
D RA11412_2585 DNA-directed RNA polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D RA11412_2584 DNA-directed RNA polymerase beta subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D RA11412_2539 DNA-directed RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D RA11412_1872 DNA-directed RNA polymerase omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:raj03010]
D RA11412_1668 SSU ribosomal protein S1p K02945 RP-S1; small subunit ribosomal protein S1
D RA11412_1217 SSU ribosomal protein S2p K02967 RP-S2; small subunit ribosomal protein S2
D RA11412_2564 SSU ribosomal protein S3p K02982 RP-S3; small subunit ribosomal protein S3
D RA11412_1895 SSU ribosomal protein S4p K02986 RP-S4; small subunit ribosomal protein S4
D RA11412_2551 SSU ribosomal protein S5p K02988 RP-S5; small subunit ribosomal protein S5
D RA11412_0459 SSU ribosomal protein S6p K02990 RP-S6; small subunit ribosomal protein S6
D RA11412_2580 SSU ribosomal protein S7p K02992 RP-S7; small subunit ribosomal protein S7
D RA11412_2554 SSU ribosomal protein S8p K02994 RP-S8; small subunit ribosomal protein S8
D RA11412_2532 SSU ribosomal protein S9p K02996 RP-S9; small subunit ribosomal protein S9
D RA11412_2571 SSU ribosomal protein S10p K02946 RP-S10; small subunit ribosomal protein S10
D RA11412_2540 SSU ribosomal protein S11p K02948 RP-S11; small subunit ribosomal protein S11
D RA11412_2581 SSU ribosomal protein S12p K02950 RP-S12; small subunit ribosomal protein S12
D RA11412_2541 SSU ribosomal protein S13p K02952 RP-S13; small subunit ribosomal protein S13
D RA11412_2791 SSU ribosomal protein S14p K02954 RP-S14; small subunit ribosomal protein S14
D RA11412_1250 SSU ribosomal protein S15p K02956 RP-S15; small subunit ribosomal protein S15
D RA11412_2064 SSU ribosomal protein S16p K02959 RP-S16; small subunit ribosomal protein S16
D RA11412_2561 SSU ribosomal protein S17p K02961 RP-S17; small subunit ribosomal protein S17
D RA11412_0456 SSU ribosomal protein S18p K02963 RP-S18; small subunit ribosomal protein S18
D RA11412_2566 SSU ribosomal protein S19p K02965 RP-S19; small subunit ribosomal protein S19
D RA11412_1852 SSU ribosomal protein S20p K02968 RP-S20; small subunit ribosomal protein S20
D RA11412_2619 LSU ribosomal protein L1p K02863 RP-L1; large subunit ribosomal protein L1
D RA11412_2567 LSU ribosomal protein L2p K02886 RP-L2; large subunit ribosomal protein L2
D RA11412_2570 LSU ribosomal protein L3p K02906 RP-L3; large subunit ribosomal protein L3
D RA11412_2569 LSU ribosomal protein L4p K02926 RP-L4; large subunit ribosomal protein L4
D RA11412_2555 LSU ribosomal protein L5p K02931 RP-L5; large subunit ribosomal protein L5
D RA11412_2553 LSU ribosomal protein L6p K02933 RP-L6; large subunit ribosomal protein L6
D RA11412_2615 LSU ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D RA11412_0455 LSU ribosomal protein L9p K02939 RP-L9; large subunit ribosomal protein L9
D RA11412_2616 LSU ribosomal protein L10p K02864 RP-L10; large subunit ribosomal protein L10
D RA11412_2620 LSU ribosomal protein L11p K02867 RP-L11; large subunit ribosomal protein L11
D RA11412_2533 LSU ribosomal protein L13p K02871 RP-L13; large subunit ribosomal protein L13
D RA11412_2557 LSU ribosomal protein L14p K02874 RP-L14; large subunit ribosomal protein L14
D RA11412_2549 LSU ribosomal protein L15p K02876 RP-L15; large subunit ribosomal protein L15
D RA11412_2563 LSU ribosomal protein L16p K02878 RP-L16; large subunit ribosomal protein L16
D RA11412_2538 LSU ribosomal protein L17p K02879 RP-L17; large subunit ribosomal protein L17
D RA11412_2552 LSU ribosomal protein L18p K02881 RP-L18; large subunit ribosomal protein L18
D RA11412_1610 LSU ribosomal protein L19p K02884 RP-L19; large subunit ribosomal protein L19
D RA11412_1298 LSU ribosomal protein L20p K02887 RP-L20; large subunit ribosomal protein L20
D RA11412_2002 LSU ribosomal protein L21p K02888 RP-L21; large subunit ribosomal protein L21
D RA11412_2565 LSU ribosomal protein L22p K02890 RP-L22; large subunit ribosomal protein L22
D RA11412_2568 LSU ribosomal protein L23p K02892 RP-L23; large subunit ribosomal protein L23
D RA11412_2556 LSU ribosomal protein L24p K02895 RP-L24; large subunit ribosomal protein L24
D RA11412_1131 LSU ribosomal protein L25p K02897 RP-L25; large subunit ribosomal protein L25
D RA11412_2001 LSU ribosomal protein L27p K02899 RP-L27; large subunit ribosomal protein L27
D RA11412_2793 LSU ribosomal protein L28p K02902 RP-L28; large subunit ribosomal protein L28
D RA11412_2562 LSU ribosomal protein L29p K02904 RP-L29; large subunit ribosomal protein L29
D RA11412_2550 LSU ribosomal protein L30p K02907 RP-L30; large subunit ribosomal protein L30
D RA11412_1784 LSU ribosomal protein L31p K02909 RP-L31; large subunit ribosomal protein L31
D RA11412_2792 LSU ribosomal protein L33p K02913 RP-L33; large subunit ribosomal protein L33
D RA11412_0478 LSU ribosomal protein L34p K02914 RP-L34; large subunit ribosomal protein L34
D RA11412_1297 LSU ribosomal protein L35p K02916 RP-L35; large subunit ribosomal protein L35
D RA11412_2542 LSU ribosomal protein L36p K02919 RP-L36; large subunit ribosomal protein L36
D RA11412_2809 small subunit ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RA11412_2826 small subunit ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RA11412_2802 small subunit ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RA11412_2808 large subunit ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RA11412_2801 large subunit ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RA11412_2827 large subunit ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RA11412_2812 5S RNA K01985 5SrRNA; 5S ribosomal RNA
D RA11412_2800 5S RNA K01985 5SrRNA; 5S ribosomal RNA
D RA11412_2814 5S RNA K01985 5SrRNA; 5S ribosomal RNA
D RA11412_2828 5S RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:raj00970]
D RA11412_2838 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RA11412_2811 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RA11412_2813 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RA11412_2835 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RA11412_2829 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RA11412_2804 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RA11412_2803 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RA11412_2824 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D RA11412_2818 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D RA11412_2846 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D RA11412_2844 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D RA11412_2823 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D RA11412_2817 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D RA11412_2833 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D RA11412_2843 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D RA11412_2854 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RA11412_2832 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RA11412_2847 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RA11412_2840 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RA11412_2834 tRNA-His K14226 tRNA-His; tRNA His
D RA11412_2810 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D RA11412_2837 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RA11412_2830 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RA11412_2822 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RA11412_2836 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RA11412_2807 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RA11412_2815 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D RA11412_2831 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D RA11412_2848 tRNA-Met K14230 tRNA-Met; tRNA Met
D RA11412_2851 tRNA-Met K14230 tRNA-Met; tRNA Met
D RA11412_2825 tRNA-Met K14230 tRNA-Met; tRNA Met
D RA11412_2819 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D RA11412_2821 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D RA11412_2839 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D RA11412_2820 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RA11412_2816 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RA11412_2850 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RA11412_2855 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RA11412_2805 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RA11412_2806 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RA11412_2852 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RA11412_2849 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D RA11412_2853 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D RA11412_2841 tRNA-Val K14237 tRNA-Val; tRNA Val
D RA11412_2845 tRNA-Val K14237 tRNA-Val; tRNA Val
D RA11412_2842 tRNA-Val K14237 tRNA-Val; tRNA Val
D RA11412_1554 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RA11412_2703 glutamyl-Q-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RA11412_1183 aspartyl-tRNA(Asn) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D RA11412_1184 aspartyl-tRNA(Asn) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D RA11412_1182 aspartyl-tRNA(Asn) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D RA11412_1892 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D RA11412_1902 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RA11412_1204 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D RA11412_1930 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D RA11412_0673 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D RA11412_0005 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D RA11412_1538 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D RA11412_2154 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D RA11412_2037 Valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D RA11412_1860 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RA11412_2012 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D RA11412_0716 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D RA11412_0422 L-O-lysylphosphatidylglycerol synthase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D RA11412_1450 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RA11412_1234 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D RA11412_1903 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D RA11412_1310 phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D RA11412_1312 phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D RA11412_1322 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RA11412_1019 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:raj03060]
D RA11412_2548 preprotein translocase secY subunit K03076 secY; preprotein translocase subunit SecY
D RA11412_1714 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D RA11412_1908 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D RA11412_1907 protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D RA11412_1909 hypothetical protein K03210 yajC; preprotein translocase subunit YajC
D RA11412_0475 inner membrane protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RA11412_2298 protein export cytoplasm protein SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RA11412_2067 signal recognition particle K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D RA11412_2071 signal recognition particle receptor protein FtsY K03110 ftsY; fused signal recognition particle receptor
D RA11412_1833 twin-arginine translocation protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D RA11412_2379 twin-arginine translocation protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D RA11412_1832 twin-arginine translocation protein TatC K03118 tatC; sec-independent protein translocase protein TatC
D RA11412_1611 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D RA11412_1612 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D RA11412_1413 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:raj04122]
D RA11412_2308 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RA11412_2307 tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D RA11412_2599 molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D RA11412_2605 molybdenum cofactor biosynthesis protein MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D RA11412_2606 molybdenum cofactor biosynthesis protein MoaD K03636 moaD; sulfur-carrier protein
D RA11412_2751 sulfur carrier protein adenylyltransferase ThiF K21147 moeZR; sulfur-carrier protein adenylyltransferase/sulfurtransferase [EC:2.7.7.80 2.7.7.- 2.8.1.11 2.8.1.-]
D RA11412_2598 sulfur carrier protein adenylyltransferase ThiF K21147 moeZR; sulfur-carrier protein adenylyltransferase/sulfurtransferase [EC:2.7.7.80 2.7.7.- 2.8.1.11 2.8.1.-]
D RA11412_2601 molybdenum cofactor biosynthesis protein MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D RA11412_2749 hypothetical protein K03154 thiS; sulfur carrier protein
C 03050 Proteasome
D RA11412_1846 bacterial proteasome-activating AAA-ATPase K13527 mpa; proteasome-associated ATPase
C 03018 RNA degradation [PATH:raj03018]
D RA11412_2004 cytoplasmic axial filament protein CafA K08300 rne; ribonuclease E [EC:3.1.26.12]
D RA11412_1035 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RA11412_1251 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D RA11412_2664 DEAD-box ATP-dependent RNA helicase CshA K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D RA11412_0755 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D RA11412_1457 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D RA11412_1263 ribonuclease J2 K12574 rnj; ribonuclease J [EC:3.1.-.-]
D RA11412_0992 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D RA11412_1356 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D RA11412_0151 heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RA11412_2505 heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RA11412_2637 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D RA11412_2531 polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D RA11412_0461 tRNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:raj03030]
D RA11412_2338 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RA11412_1416 DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RA11412_0857 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RA11412_0022 DNA polymerase III delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RA11412_1855 DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RA11412_0481 DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RA11412_0442 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D RA11412_1208 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D RA11412_1609 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RA11412_0458 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RA11412_0130 ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D RA11412_1613 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D RA11412_1180 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:raj03410]
D RA11412_0902 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D RA11412_0724 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D RA11412_2080 formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D RA11412_2047 formamidopyrimidine-DNA glycosylase K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D RA11412_1351 DNA-3-methyladenine glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D RA11412_1018 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D RA11412_0678 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D RA11412_1180 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:raj03420]
D RA11412_1152 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D RA11412_1968 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D RA11412_1672 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D RA11412_1702 excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D RA11412_2333 ATP-dependent DNA helicase SCO5184 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RA11412_0109 ATP-dependent DNA helicase UvrD/PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RA11412_1180 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:raj03430]
D RA11412_2333 ATP-dependent DNA helicase SCO5184 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RA11412_0109 ATP-dependent DNA helicase UvrD/PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RA11412_2462 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D RA11412_2463 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D RA11412_1609 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RA11412_0458 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RA11412_1416 DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RA11412_0481 DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RA11412_0857 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RA11412_1855 DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RA11412_0022 DNA polymerase III delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RA11412_2338 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RA11412_1180 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:raj03440]
D RA11412_1609 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RA11412_0458 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RA11412_0482 DNA recombination repair protein RecF K03629 recF; DNA replication and repair protein RecF
D RA11412_1796 DNA recombination repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D RA11412_0853 recombination protein RecR K06187 recR; recombination protein RecR
D RA11412_1270 RecA protein K03553 recA; recombination protein RecA
D RA11412_1914 holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D RA11412_1911 holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D RA11412_1915 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D RA11412_2088 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D RA11412_2089 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D RA11412_0412 hypothetical protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D RA11412_1416 DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RA11412_0481 DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RA11412_0857 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RA11412_1855 DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RA11412_0022 DNA polymerase III delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RA11412_2338 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RA11412_1868 helicase PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:raj03250]
D RA11412_0495 peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:raj02010]
D RA11412_0787 alkanesulfonates-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D RA11412_0786 alkanesulfonates transport system permease protein K15554 ssuC; sulfonate transport system permease protein
D RA11412_0788 alkanesulfonates ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D RA11412_2604 molybdenum ABC transporter K02020 modA; molybdate transport system substrate-binding protein
D RA11412_2603 molybdenum transport system permease protein ModB K02018 modB; molybdate transport system permease protein
D RA11412_2465 L-proline glycine betaine binding ABC transporter protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D RA11412_0811 L-proline glycine betaine binding ABC transporter protein ProX K05845 opuC; osmoprotectant transport system substrate-binding protein
D RA11412_0809 L-proline glycine betaine ABC transport system permease protein ProW K05846 opuBD; osmoprotectant transport system permease protein
D RA11412_0810 glycine betaine ABC transport system permease protein K05846 opuBD; osmoprotectant transport system permease protein
D RA11412_0808 L-proline glycine betaine ABC transport system permease protein ProV K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D RA11412_2617 maltose/maltodextrin transport ATP-binding protein MalK K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D RA11412_2387 glutamate binding protein K10005 gluB; glutamate transport system substrate-binding protein
D RA11412_2388 ABC-type amino acid transport system K10006 gluC; glutamate transport system permease protein
D RA11412_2389 permease protein of ABC transporter K10007 gluD; glutamate transport system permease protein
D RA11412_2386 ABC transporter related K10008 gluA; glutamate transport system ATP-binding protein [EC:7.4.2.1]
D RA11412_0184 methionine ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D RA11412_0182 methionine ABC transporter permease protein K02072 metI; D-methionine transport system permease protein
D RA11412_0183 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D RA11412_0828 oligopeptide ABC transporter K13889 gsiB; glutathione transport system substrate-binding protein
D RA11412_0826 oligopeptide transport system permease protein OppC K13891 gsiD; glutathione transport system permease protein
D RA11412_0827 oligopeptide transport ATP-binding protein OppD K13892 gsiA; glutathione transport system ATP-binding protein
D RA11412_2149 hypothetical protein K25286 fagD; iron-siderophore transport system substrate-binding protein
D RA11412_2146 ABC-type Fe3+-siderophore transport system K23186 fepD; iron-siderophore transport system permease protein
D RA11412_2145 ABC-type enterobactin transport system K23187 fepG; iron-siderophore transport system permease protein
D RA11412_2144 methionine ABC transporter ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D RA11412_0683 manganese ABC transporter SitA K11601 mntC; manganese transport system substrate-binding protein
D RA11412_0685 manganese ABC transporter SitD K11602 mntB; manganese transport system permease protein
D RA11412_0684 manganese ABC transporter SitB K11603 mntA; manganese transport system ATP-binding protein [EC:7.2.2.5]
D RA11412_1772 substrate-specific component BioY K03523 bioY; biotin transport system substrate-specific component
D RA11412_1770 transmembrane component BioN K16783 bioN; biotin transport system permease protein
D RA11412_1771 ATPase component BioM K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-]
D RA11412_2737 transmembrane component YkoC K16785 ecfT; energy-coupling factor transport system permease protein
D RA11412_2022 transmembrane component BL0694 K16785 ecfT; energy-coupling factor transport system permease protein
D RA11412_2019 ABC transporter ATP-binding protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D RA11412_2017 ABC transporter ATP-binding protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D RA11412_2214 transport ATP-binding protein CydCD K16014 cydCD; ATP-binding cassette, subfamily C, bacterial CydCD
C 02060 Phosphotransferase system (PTS) [PATH:raj02060]
D RA11412_0163 phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D RA11412_2413 hypothetical protein K02784 ptsH; phosphocarrier protein HPr
D RA11412_0162 phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D RA11412_0639 glucose-specific IIA component protein K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D RA11412_2612 sucrose-specific IIB component protein K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D RA11412_2613 sucrose-specific IIB component protein K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D RA11412_0833 phosphotransferase system IIC component K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D RA11412_2485 maltose and glucose-specific IIC component protein K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-]
D RA11412_0516 mannose-specific IID component protein K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D RA11412_0515 mannose-specific IID component protein K02795 manY; mannose PTS system EIIC component
D RA11412_0514 mannose-specific IID component protein K02796 manZ; mannose PTS system EIID component
D RA11412_0164 fructose-specific IIA component protein K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D RA11412_0165 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
C 03070 Bacterial secretion system [PATH:raj03070]
D RA11412_1908 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D RA11412_1907 protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D RA11412_1714 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D RA11412_2548 preprotein translocase secY subunit K03076 secY; preprotein translocase subunit SecY
D RA11412_1909 hypothetical protein K03210 yajC; preprotein translocase subunit YajC
D RA11412_0475 inner membrane protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RA11412_2298 protein export cytoplasm protein SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RA11412_2071 signal recognition particle receptor protein FtsY K03110 ftsY; fused signal recognition particle receptor
D RA11412_2067 signal recognition particle K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D RA11412_1833 twin-arginine translocation protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D RA11412_2379 twin-arginine translocation protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D RA11412_1832 twin-arginine translocation protein TatC K03118 tatC; sec-independent protein translocase protein TatC
D RA11412_0344 putative traG-family protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:raj02020]
D RA11412_0010 phosphate regulon transcriptional regulatory protein PhoB K07776 regX3; two-component system, OmpR family, response regulator RegX3
D RA11412_1753 cytochrome oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D RA11412_2312 HtrA protease/chaperone protein K08372 pepD; putative serine protease PepD [EC:3.4.21.-]
D RA11412_2303 sensor histidine kinase MtrB K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3]
D RA11412_2304 phosphate regulon transcriptional regulatory protein PhoB K07670 mtrA; two-component system, OmpR family, response regulator MtrA
D RA11412_0480 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D RA11412_0683 manganese ABC transporter SitA K11601 mntC; manganese transport system substrate-binding protein
D RA11412_0684 manganese ABC transporter SitB K11603 mntA; manganese transport system ATP-binding protein [EC:7.2.2.5]
D RA11412_0685 manganese ABC transporter SitD K11602 mntB; manganese transport system permease protein
D RA11412_2137 hypothetical protein K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D RA11412_2528 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D RA11412_0213 citrate lyase beta chain K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D RA11412_2597 respiratory nitrate reductase alpha chain K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D RA11412_2596 respiratory nitrate reductase beta chain K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D RA11412_2594 respiratory nitrate reductase gamma chain K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D RA11412_2595 respiratory nitrate reductase delta chain K00373 narJ; nitrate reductase molybdenum cofactor assembly chaperone NarJ/NarW
D RA11412_2455 sensor histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D RA11412_2458 putative two-component system sensor kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D RA11412_2456 putative two-component system response regulator K07693 desR; two-component system, NarL family, response regulator DesR
D RA11412_2457 putative two-component system response regulator K07693 desR; two-component system, NarL family, response regulator DesR
D RA11412_2280 type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D RA11412_0910 Flp pilus assembly protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D RA11412_2279 Flp pilus assembly protein TadB K12510 tadB; tight adherence protein B
D RA11412_0911 hypothetical protein K12510 tadB; tight adherence protein B
D RA11412_0912 hypothetical protein K12510 tadB; tight adherence protein B
D RA11412_2278 type II/IV secretion system protein TadC K12511 tadC; tight adherence protein C
D RA11412_2245 glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RA11412_1426 glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RA11412_1335 C4-dicarboxylate-transport transmembrane protein DctA K11103 dctA; aerobic C4-dicarboxylate transport protein
D RA11412_0899 cAMP-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RA11412_1990 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D RA11412_2216 cytochrome d ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D RA11412_2215 cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D RA11412_0252 low molecular weight protein tyrosine phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D RA11412_0986 protein tyrosine phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:raj02024]
D RA11412_1246 S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D RA11412_1634 anthranilate synthase K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D RA11412_1382 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase II K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D RA11412_1434 AttM/AiiB protein K13075 ahlD; N-acyl homoserine lactone hydrolase [EC:3.1.1.81]
D RA11412_0185 long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RA11412_1318 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RA11412_1377 long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RA11412_2138 hypothetical protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RA11412_0899 cAMP-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RA11412_1632 GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D RA11412_1630 diaminohydroxyphosphoribosylaminopyrimidine deaminase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D RA11412_1526 dipeptide-binding ABC transporter K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RA11412_0829 oligopeptide ABC transporter K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RA11412_0475 inner membrane protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RA11412_1714 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D RA11412_2548 preprotein translocase secY subunit K03076 secY; preprotein translocase subunit SecY
D RA11412_1909 hypothetical protein K03210 yajC; preprotein translocase subunit YajC
D RA11412_2298 protein export cytoplasm protein SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RA11412_2071 signal recognition particle receptor protein FtsY K03110 ftsY; fused signal recognition particle receptor
D RA11412_2067 signal recognition particle K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
C 02040 Flagellar assembly
D RA11412_2228 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D RA11412_1035 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance
D RA11412_1391 cell division protein FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D RA11412_1392 cell division protein FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:raj01502]
D RA11412_2097 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RA11412_2516 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D RA11412_1394 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D RA11412_1395 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D RA11412_1403 UDP-N-acetylglucosamine-N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D RA11412_2528 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:raj01503]
D RA11412_0495 peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D RA11412_2137 hypothetical protein K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:raj01000]
C 01001 Protein kinases [BR:raj01001]
D RA11412_0432 serine/threonine-protein kinase PknA K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D RA11412_0433 serine/threonine protein kinase PrkC K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D RA11412_1383 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D RA11412_2303 sensor histidine kinase MtrB K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3]
D RA11412_0125 osmosensitive K+ channel histidine kinase KdpD K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D RA11412_0126 osmosensitive K+ channel histidine kinase KdpD K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D RA11412_0547 osmosensitive K+ channel histidine kinase KdpD K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D RA11412_2455 sensor histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D RA11412_2458 putative two-component system sensor kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D RA11412_2292 serine phosphatase RsbU K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:raj01009]
D RA11412_1178 serine/threonine phosphatase PPP K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D RA11412_0428 serine/threonine phosphatase PPP K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
C 01002 Peptidases and inhibitors [BR:raj01002]
D RA11412_1413 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D RA11412_1058 putative type IV peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D RA11412_2398 pyrrolidone-carboxylate peptidase K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3]
D RA11412_2497 GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D RA11412_0077 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D RA11412_0078 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D RA11412_2526 glucosamine-fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D RA11412_0778 putative asparagine synthetase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D RA11412_0436 sortase K07284 srtA; sortase A [EC:3.4.22.70]
D RA11412_0801 transcriptional regulator K07052 K07052; CAAX protease family protein
D RA11412_0295 hypothetical protein K07052 K07052; CAAX protease family protein
D RA11412_2050 membrane alanine aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D RA11412_1789 membrane alanine aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D RA11412_0320 metallopeptidase K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D RA11412_2528 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D RA11412_2232 cytosol aminopeptidase PepA K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D RA11412_2382 N-succinyl-L,L-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D RA11412_1419 methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D RA11412_2546 methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D RA11412_2369 Xaa-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D RA11412_0701 cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D RA11412_2671 peptidase M48 K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D RA11412_2312 HtrA protease/chaperone protein K08372 pepD; putative serine protease PepD [EC:3.4.21.-]
D RA11412_1187 protease II K01354 ptrB; oligopeptidase B [EC:3.4.21.83]
D RA11412_0691 D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D RA11412_2043 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D RA11412_2044 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D RA11412_2321 Lon-like protease K07177 K07177; Lon-like protease
D RA11412_1288 SOS-response repressor and protease LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D RA11412_1611 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D RA11412_1612 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
C 01003 Glycosyltransferases [BR:raj01003]
D RA11412_1827 dolichyl-phosphate beta-D-mannosyltransferase K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83]
D RA11412_1079 conserved membrane protein K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
D RA11412_1114 hypothetical protein K16150 K16150; glycogen synthase [EC:2.4.1.11]
D RA11412_0594 glycosyl transferase K21011 pelF; polysaccharide biosynthesis protein PelF
D RA11412_0298 probable conserved integral membrane protein K13671 K13671; alpha-1,2-mannosyltransferase [EC:2.4.1.-]
D RA11412_0299 hypothetical protein K13671 K13671; alpha-1,2-mannosyltransferase [EC:2.4.1.-]
D RA11412_1130 probable conserved integral membrane protein K13671 K13671; alpha-1,2-mannosyltransferase [EC:2.4.1.-]
D RA11412_0768 probable conserved integral membrane protein K13671 K13671; alpha-1,2-mannosyltransferase [EC:2.4.1.-]
D RA11412_0769 probable conserved integral membrane protein K13671 K13671; alpha-1,2-mannosyltransferase [EC:2.4.1.-]
D RA11412_2286 galactofuranosyl transferase K16650 glft2; galactofuranosylgalactofuranosylrhamnosyl-N-acetylglucosaminyl-diphospho-decaprenol beta-1,5/1,6-galactofuranosyltransferase [EC:2.4.1.288]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:raj01005]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:raj01011]
D RA11412_2101 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D RA11412_2658 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D RA11412_1404 UDP-N-acetylmuramate-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D RA11412_1396 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D RA11412_1393 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D RA11412_2097 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RA11412_2516 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D RA11412_1507 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D RA11412_1395 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D RA11412_1403 UDP-N-acetylglucosamine-N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D RA11412_1934 undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D RA11412_0463 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D RA11412_0464 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D RA11412_1391 cell division protein FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D RA11412_1392 cell division protein FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D RA11412_0430 cell division protein FtsI K05364 pbpA; penicillin-binding protein A
D RA11412_0691 D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D RA11412_2528 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D RA11412_0436 sortase K07284 srtA; sortase A [EC:3.4.22.70]
D RA11412_1890 protein YceG K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
C 01004 Lipid biosynthesis proteins [BR:raj01004]
D RA11412_1620 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D RA11412_1622 3-oxoacyl-[acyl-carrier-protein] synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D RA11412_1624 3-oxoacyl-[acyl-carrier-protein] synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D RA11412_1780 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RA11412_1781 enoyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RA11412_2054 Acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D RA11412_0775 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RA11412_0185 long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RA11412_1318 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RA11412_1377 long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RA11412_2138 hypothetical protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RA11412_1381 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D RA11412_1700 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D RA11412_2100 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:raj01008]
D RA11412_2141 2,3-dihydroxybenzoate-AMP ligase K02363 entE; 2,3-dihydroxybenzoate---[aryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.71]
D RA11412_2492 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
C 01006 Prenyltransferases [BR:raj01006]
D RA11412_1385 octaprenyl diphosphate synthase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D RA11412_1056 undecaprenyl diphosphate synthase K12503 uppS; short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68]
D RA11412_1798 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D RA11412_1279 tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D RA11412_2730 1,4-dihydroxy-2-naphthoate polyprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D RA11412_1752 heme O synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:raj01007]
D RA11412_1554 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RA11412_2703 glutamyl-Q-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RA11412_1322 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RA11412_1019 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D RA11412_0005 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D RA11412_1450 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RA11412_1538 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D RA11412_2012 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D RA11412_2037 Valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D RA11412_1860 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RA11412_0716 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D RA11412_0422 L-O-lysylphosphatidylglycerol synthase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D RA11412_1902 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RA11412_1903 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D RA11412_1204 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D RA11412_0673 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D RA11412_1234 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D RA11412_1930 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D RA11412_1892 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D RA11412_1310 phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D RA11412_1312 phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D RA11412_2626 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RA11412_2464 aspartate aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D RA11412_0197 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RA11412_1819 gamma-aminobutyrate:alpha-ketoglutarate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D RA11412_2349 glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D RA11412_1551 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:raj00194]
D RA11412_1476 ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D RA11412_1475 ATP synthase beta chain K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D RA11412_1474 ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D RA11412_1473 ATP synthase alpha chain K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D RA11412_1472 ATP synthase delta chain K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D RA11412_1471 ATP synthase F0 sector subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D RA11412_1470 ATP synthase F0 sector subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D RA11412_1469 ATP synthase F0 sector subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:raj03000]
D RA11412_0920 AraC-family transcriptional regulator K13653 K13653; AraC family transcriptional regulator
D RA11412_0441 regulatory protein K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D RA11412_0166 transcriptional repressor K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D RA11412_2610 sucrose operon repressor ScrR K03484 scrR; LacI family transcriptional regulator, sucrose operon repressor
D RA11412_1016 predicted transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D RA11412_0862 lactate-responsive regulator LldR K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D RA11412_0969 lactate-responsive regulator LldR K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D RA11412_1013 regulatory protein TetR K21962 acnR; TetR/AcrR family transcriptional regulator, transcriptional repressor of aconitase
D RA11412_1199 transcriptional regulator K21744 tipA; MerR family transcriptional regulator, thiopeptide resistance regulator
D RA11412_2252 Zinc uptake regulation protein ZUR K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D RA11412_2672 transcriptional regulator K22297 furA; Fur family transcriptional regulator, stress-responsive regulator
D RA11412_0899 cAMP-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RA11412_1932 putative ArsR-family transcriptional regulator K22298 smtB; ArsR family transcriptional regulator, zinc-responsive transcriptional repressor
D RA11412_1268 hypothetical protein K27043 clgR; XRE family transcriptional regulator, stress-response regulator
D RA11412_0120 iron-dependent repressor IdeR/DtxR K26252 dtxR; DtxR family transcriptional regulator, iron-dependent repressor
D RA11412_1175 biotin-protein ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D RA11412_1367 proline dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D RA11412_1898 hypothetical protein K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB
D RA11412_0700 hypothetical protein K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB
D RA11412_0523 beta-glucoside bgl operon antiterminator K03488 licT; beta-glucoside operon transcriptional antiterminator
D RA11412_1076 sporulation regulatory protein WhiB K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D RA11412_2291 WhiB-like transcription regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D RA11412_0666 repressor CsoR K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D RA11412_0470 chromosome (plasmid) partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RA11412_1316 arginine pathway regulatory protein ArgR K03402 argR; transcriptional regulator of arginine metabolism
D RA11412_1364 transcriptional regulator K05346 deoR; deoxyribonucleoside regulator
D RA11412_1881 uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D RA11412_1417 ribonucleotide reductase transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR
D RA11412_1388 cell division protein MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:raj03021]
D RA11412_2539 DNA-directed RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D RA11412_2585 DNA-directed RNA polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D RA11412_2584 DNA-directed RNA polymerase beta subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D RA11412_1872 DNA-directed RNA polymerase omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D RA11412_2228 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D RA11412_0649 RNA polymerase sigma factor RpoE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D RA11412_2263 RNA polymerase sigma-54 factor RpoN K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D RA11412_1237 transcription termination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D RA11412_1883 transcription termination protein NusB K03625 nusB; transcription antitermination protein NusB
D RA11412_2622 transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D RA11412_1050 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D RA11412_1457 transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:raj03019]
D RA11412_2004 cytoplasmic axial filament protein CafA K08300 rne; ribonuclease E [EC:3.1.26.12]
D RA11412_1263 ribonuclease J2 K12574 rnj; ribonuclease J [EC:3.1.-.-]
D RA11412_1605 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D RA11412_2664 DEAD-box ATP-dependent RNA helicase CshA K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D RA11412_0755 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D RA11412_1035 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RA11412_1251 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D RA11412_1457 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D RA11412_0992 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D RA11412_1356 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D RA11412_0151 heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RA11412_2505 heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RA11412_2637 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D RA11412_2531 polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D RA11412_0461 tRNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D RA11412_1705 hypothetical ATP-binding protein UPF0042 K06958 rapZ; RNase adapter protein RapZ
D RA11412_1830 putative helicase K03727 helY; ATP-dependent RNA helicase HelY [EC:5.6.2.6]
D RA11412_1433 ATP-dependent helicase hrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:raj03011]
D RA11412_1668 SSU ribosomal protein S1p K02945 RP-S1; small subunit ribosomal protein S1
D RA11412_1217 SSU ribosomal protein S2p K02967 RP-S2; small subunit ribosomal protein S2
D RA11412_2564 SSU ribosomal protein S3p K02982 RP-S3; small subunit ribosomal protein S3
D RA11412_1895 SSU ribosomal protein S4p K02986 RP-S4; small subunit ribosomal protein S4
D RA11412_2551 SSU ribosomal protein S5p K02988 RP-S5; small subunit ribosomal protein S5
D RA11412_0459 SSU ribosomal protein S6p K02990 RP-S6; small subunit ribosomal protein S6
D RA11412_2580 SSU ribosomal protein S7p K02992 RP-S7; small subunit ribosomal protein S7
D RA11412_2554 SSU ribosomal protein S8p K02994 RP-S8; small subunit ribosomal protein S8
D RA11412_2532 SSU ribosomal protein S9p K02996 RP-S9; small subunit ribosomal protein S9
D RA11412_2571 SSU ribosomal protein S10p K02946 RP-S10; small subunit ribosomal protein S10
D RA11412_2540 SSU ribosomal protein S11p K02948 RP-S11; small subunit ribosomal protein S11
D RA11412_2581 SSU ribosomal protein S12p K02950 RP-S12; small subunit ribosomal protein S12
D RA11412_2541 SSU ribosomal protein S13p K02952 RP-S13; small subunit ribosomal protein S13
D RA11412_2791 SSU ribosomal protein S14p K02954 RP-S14; small subunit ribosomal protein S14
D RA11412_1250 SSU ribosomal protein S15p K02956 RP-S15; small subunit ribosomal protein S15
D RA11412_2064 SSU ribosomal protein S16p K02959 RP-S16; small subunit ribosomal protein S16
D RA11412_2561 SSU ribosomal protein S17p K02961 RP-S17; small subunit ribosomal protein S17
D RA11412_0456 SSU ribosomal protein S18p K02963 RP-S18; small subunit ribosomal protein S18
D RA11412_2566 SSU ribosomal protein S19p K02965 RP-S19; small subunit ribosomal protein S19
D RA11412_1852 SSU ribosomal protein S20p K02968 RP-S20; small subunit ribosomal protein S20
D RA11412_2619 LSU ribosomal protein L1p K02863 RP-L1; large subunit ribosomal protein L1
D RA11412_2567 LSU ribosomal protein L2p K02886 RP-L2; large subunit ribosomal protein L2
D RA11412_2570 LSU ribosomal protein L3p K02906 RP-L3; large subunit ribosomal protein L3
D RA11412_2569 LSU ribosomal protein L4p K02926 RP-L4; large subunit ribosomal protein L4
D RA11412_2555 LSU ribosomal protein L5p K02931 RP-L5; large subunit ribosomal protein L5
D RA11412_2553 LSU ribosomal protein L6p K02933 RP-L6; large subunit ribosomal protein L6
D RA11412_0455 LSU ribosomal protein L9p K02939 RP-L9; large subunit ribosomal protein L9
D RA11412_2616 LSU ribosomal protein L10p K02864 RP-L10; large subunit ribosomal protein L10
D RA11412_2620 LSU ribosomal protein L11p K02867 RP-L11; large subunit ribosomal protein L11
D RA11412_2615 LSU ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D RA11412_2533 LSU ribosomal protein L13p K02871 RP-L13; large subunit ribosomal protein L13
D RA11412_2557 LSU ribosomal protein L14p K02874 RP-L14; large subunit ribosomal protein L14
D RA11412_2549 LSU ribosomal protein L15p K02876 RP-L15; large subunit ribosomal protein L15
D RA11412_2563 LSU ribosomal protein L16p K02878 RP-L16; large subunit ribosomal protein L16
D RA11412_2538 LSU ribosomal protein L17p K02879 RP-L17; large subunit ribosomal protein L17
D RA11412_2552 LSU ribosomal protein L18p K02881 RP-L18; large subunit ribosomal protein L18
D RA11412_1610 LSU ribosomal protein L19p K02884 RP-L19; large subunit ribosomal protein L19
D RA11412_1298 LSU ribosomal protein L20p K02887 RP-L20; large subunit ribosomal protein L20
D RA11412_2002 LSU ribosomal protein L21p K02888 RP-L21; large subunit ribosomal protein L21
D RA11412_2565 LSU ribosomal protein L22p K02890 RP-L22; large subunit ribosomal protein L22
D RA11412_2568 LSU ribosomal protein L23p K02892 RP-L23; large subunit ribosomal protein L23
D RA11412_2556 LSU ribosomal protein L24p K02895 RP-L24; large subunit ribosomal protein L24
D RA11412_2001 LSU ribosomal protein L27p K02899 RP-L27; large subunit ribosomal protein L27
D RA11412_2793 LSU ribosomal protein L28p K02902 RP-L28; large subunit ribosomal protein L28
D RA11412_2562 LSU ribosomal protein L29p K02904 RP-L29; large subunit ribosomal protein L29
D RA11412_2550 LSU ribosomal protein L30p K02907 RP-L30; large subunit ribosomal protein L30
D RA11412_1784 LSU ribosomal protein L31p K02909 RP-L31; large subunit ribosomal protein L31
D RA11412_2792 LSU ribosomal protein L33p K02913 RP-L33; large subunit ribosomal protein L33
D RA11412_0478 LSU ribosomal protein L34p K02914 RP-L34; large subunit ribosomal protein L34
D RA11412_1297 LSU ribosomal protein L35p K02916 RP-L35; large subunit ribosomal protein L35
D RA11412_2542 LSU ribosomal protein L36p K02919 RP-L36; large subunit ribosomal protein L36
D RA11412_1131 LSU ribosomal protein L25p K02897 RP-L25; large subunit ribosomal protein L25
D RA11412_2812 5S RNA K01985 5SrRNA; 5S ribosomal RNA
D RA11412_2800 5S RNA K01985 5SrRNA; 5S ribosomal RNA
D RA11412_2814 5S RNA K01985 5SrRNA; 5S ribosomal RNA
D RA11412_2828 5S RNA K01985 5SrRNA; 5S ribosomal RNA
D RA11412_2809 small subunit ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RA11412_2826 small subunit ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RA11412_2802 small subunit ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RA11412_2808 large subunit ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RA11412_2801 large subunit ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RA11412_2827 large subunit ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:raj03009]
D RA11412_1605 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D RA11412_1938 GTP-binding protein Era K03595 era; GTPase
D RA11412_1999 GTP-binding protein Obg K03979 obgE; GTPase [EC:3.6.5.-]
D RA11412_1237 transcription termination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D RA11412_1883 transcription termination protein NusB K03625 nusB; transcription antitermination protein NusB
D RA11412_2622 transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D RA11412_1087 SSU rRNA dimethyltransferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D RA11412_2153 ribosomal RNA small subunit methyltransferase B K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D RA11412_1283 hypothetical protein K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D RA11412_2086 ribosomal RNA small subunit methyltransferase D K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D RA11412_1946 ribosomal RNA small subunit methyltransferase E K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D RA11412_0473 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D RA11412_1389 rRNA small subunit methyltransferase H K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D RA11412_1081 rRNA small subunit methyltransferase I K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D RA11412_1327 RNA binding methyltransferase FtsJ like K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D RA11412_0004 23S rRNA methyltransferase rlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D RA11412_2545 ribosomal RNA large subunit methyltransferase N K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D RA11412_0148 RNA methyltransferase K03212 rumB; 23S rRNA (uracil747-C5)-methyltransferase [EC:2.1.1.189]
D RA11412_0049 ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D RA11412_1340 pseudouridine synthase family protein K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D RA11412_1415 ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D RA11412_2636 acetyl-CoA:Cys-GlcN-Ins acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D RA11412_2513 ribosomal-protein-S18p-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D RA11412_1233 N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D RA11412_2062 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D RA11412_2004 cytoplasmic axial filament protein CafA K08300 rne; ribonuclease E [EC:3.1.26.12]
D RA11412_1891 putative Holliday junction resolvase YqgF K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D RA11412_2664 DEAD-box ATP-dependent RNA helicase CshA K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D RA11412_2266 ribosome small subunit-stimulated GTPase EngC K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D RA11412_1285 GTP-binding protein HflX K03665 hflX; GTPase
D RA11412_1461 TsaC protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D RA11412_1905 GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D RA11412_1240 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D RA11412_1202 hypothetical protein K14761 rlbA; ribosome-associated protein
D RA11412_1995 ribosomal silencing factor RsfA K09710 ybeB; ribosome-associated protein
D RA11412_1943 metal-dependent hydrolase YbeY K07042 ybeY; probable rRNA maturation factor
D RA11412_2452 GTP-binding and nucleic acid-binding protein YchF K06942 ychF; ribosome-binding ATPase
D RA11412_2084 hypothetical protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:raj03016]
D RA11412_1554 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RA11412_2703 glutamyl-Q-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RA11412_1234 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D RA11412_2012 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D RA11412_1860 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RA11412_1538 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D RA11412_1450 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RA11412_0716 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D RA11412_0422 L-O-lysylphosphatidylglycerol synthase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D RA11412_1902 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RA11412_1892 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D RA11412_1204 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D RA11412_1930 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D RA11412_0673 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D RA11412_0005 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D RA11412_2037 Valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D RA11412_1903 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D RA11412_1310 phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D RA11412_1312 phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D RA11412_1322 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RA11412_1019 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D RA11412_1899 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D RA11412_1848 protein-L-isoaspartate methyltransferase K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220]
D RA11412_0996 tRNA (guanine46-N7-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D RA11412_0997 tRNA (guanine46-N7-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D RA11412_2536 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D RA11412_1241 tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D RA11412_2308 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RA11412_1461 TsaC protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D RA11412_1279 tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D RA11412_0477 ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D RA11412_1509 ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D RA11412_2171 ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5]
D RA11412_2167 Cys-tRNA(Pro) deacylase YbaK K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D RA11412_0757 tRNA-specific adenosine-34 deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D RA11412_1277 tRNA methylthiotransferase K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D RA11412_2061 tRNA (Guanine37-N1) -methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D RA11412_2309 tRNA (cytidine(34)-O)-methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D RA11412_1299 tRNA (guanosine(18)-O)-methyltransferase K03437 spoU; RNA methyltransferase, TrmH family
D RA11412_0049 ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D RA11412_2307 tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D RA11412_2630 folate-dependent protein K06980 ygfZ; tRNA-modifying protein YgfZ
D RA11412_0052 tRNA-guanine transglycosylase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D RA11412_0698 tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D RA11412_2514 TsaB protein K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D RA11412_2515 TsaE protein K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D RA11412_1251 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:raj03012]
D RA11412_1239 translation initiation factor 2 K02519 infB; translation initiation factor IF-2
D RA11412_1296 translation initiation factor 3 K02520 infC; translation initiation factor IF-3
D RA11412_1218 translation elongation factor Ts K02357 tsf; elongation factor Ts
D RA11412_2576 translation elongation factor Tu K02358 tuf; elongation factor Tu
D RA11412_2579 translation elongation factor G K02355 fusA; elongation factor G
D RA11412_1458 peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D RA11412_1220 ribosome recycling factor K02838 frr; ribosome recycling factor
D RA11412_1459 protein-N(5)-glutamine methyltransferase PrmC K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D RA11412_2543 translation initiation factor 1 K02518 infA; translation initiation factor IF-1
D RA11412_1884 translation elongation factor P K02356 efp; elongation factor P
D RA11412_2270 peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
C 03110 Chaperones and folding catalysts [BR:raj03110]
D RA11412_0100 ClpB protein K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D RA11412_0719 ATP-dependent Clp protease ClpC K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D RA11412_2042 ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D RA11412_0992 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D RA11412_1356 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D RA11412_0151 heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RA11412_2505 heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RA11412_1947 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D RA11412_0995 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D RA11412_0993 heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE
D RA11412_1360 heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE
D RA11412_0645 ribosome-associated heat shock protein K04762 hslR; ribosome-associated heat shock protein Hsp15
D RA11412_2506 heat shock protein 60 family co-chaperone GroES K04078 groES; chaperonin GroES
D RA11412_0701 cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D RA11412_1469 ATP synthase F0 sector subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D RA11412_2773 copper metallochaperone K09796 pccA; periplasmic copper chaperone A
D RA11412_0495 peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D RA11412_0469 thioredoxin K03671 TXN; thioredoxin
D RA11412_2668 thiosulfate sulfurtransferase K03671 TXN; thioredoxin
D RA11412_1487 thioredoxin domain-containing protein EC-YbbN K05838 ybbN; putative thioredoxin
C 04131 Membrane trafficking [BR:raj04131]
D RA11412_2007 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D RA11412_0604 NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RA11412_1708 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RA11412_0014 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D RA11412_1655 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RA11412_2743 hypothetical protein K06902 UMF1; MFS transporter, UMF1 family
C 04121 Ubiquitin system [BR:raj04121]
D RA11412_1843 hypothetical protein K13570 pup; prokaryotic ubiquitin-like protein Pup
C 03051 Proteasome [BR:raj03051]
D RA11412_1846 bacterial proteasome-activating AAA-ATPase K13527 mpa; proteasome-associated ATPase
D RA11412_1841 putative proteasome component K13571 pafA; proteasome accessory factor A [EC:6.3.1.19]
D RA11412_1844 Pup ligase PafA K20814 dop; Pup amidohydrolase [EC:3.5.1.119]
C 03032 DNA replication proteins [BR:raj03032]
D RA11412_0130 ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D RA11412_2790 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D RA11412_0480 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D RA11412_0442 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D RA11412_1208 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D RA11412_1609 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RA11412_0458 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RA11412_1416 DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RA11412_0481 DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RA11412_1855 DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RA11412_0022 DNA polymerase III delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RA11412_2338 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RA11412_0857 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RA11412_1613 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D RA11412_1180 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D RA11412_0486 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D RA11412_2204 topoisomerase IV subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D RA11412_0485 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D RA11412_2217 topoisomerase IV subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D RA11412_0935 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:raj03036]
D RA11412_0718 histone protein Lsr2 K26249 lsr2; nucleoid-associated protein Lsr2
D RA11412_2790 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D RA11412_0480 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D RA11412_0104 iron-binding ferritin-like antioxidant protein K04047 dps; starvation-inducible DNA-binding protein
D RA11412_0441 regulatory protein K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D RA11412_2074 chromosome partition protein smc K03529 smc; chromosome segregation protein
D RA11412_1338 segregation and condensation protein A K05896 scpA; segregation and condensation protein A
D RA11412_1339 segregation and condensation protein B K06024 scpB; segregation and condensation protein B
D RA11412_1391 cell division protein FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D RA11412_1392 cell division protein FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D RA11412_2289 hypothetical protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D RA11412_1264 cell division protein FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D RA11412_1406 cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ
D RA11412_1407 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D RA11412_2158 ATP/GTP-binding integral membrane protein K06916 zapE; cell division protein ZapE
D RA11412_1410 hypothetical protein K09772 sepF; cell division inhibitor SepF
D RA11412_0472 chromosome (plasmid) partitioning protein ParA K03496 parA; chromosome partitioning protein
D RA11412_1336 chromosome (plasmid) partitioning protein ParA K03496 parA; chromosome partitioning protein
D RA11412_1373 ATPase K03496 parA; chromosome partitioning protein
D RA11412_0470 chromosome (plasmid) partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RA11412_0473 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D RA11412_1619 tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D RA11412_1334 tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D RA11412_2378 Mrp protein homolog K03593 mrp; ATP-binding protein involved in chromosome partitioning
D RA11412_0706 cell filamentation protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D RA11412_0342 cell filamentation protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D RA11412_1707 cytoplasmic hypothetical protein K09762 whiA; cell division protein WhiA
C 03400 DNA repair and recombination proteins [BR:raj03400]
D RA11412_1352 methylated-DNA-protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D RA11412_0724 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D RA11412_0902 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D RA11412_2639 MutT1 K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D RA11412_1303 5-methyl-dCTP pyrophosphohydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D RA11412_2401 nudix hydrolase family protein PA3470 K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D RA11412_2466 hypothetical protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D RA11412_0400 nudix-related transcriptional regulator NrtR K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D RA11412_2195 deoxyuridine-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D RA11412_1351 DNA-3-methyladenine glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D RA11412_2080 formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D RA11412_2047 formamidopyrimidine-DNA glycosylase K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D RA11412_1018 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D RA11412_0678 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D RA11412_1180 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D RA11412_1968 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D RA11412_1672 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D RA11412_1702 excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D RA11412_2333 ATP-dependent DNA helicase SCO5184 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RA11412_0109 ATP-dependent DNA helicase UvrD/PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RA11412_2585 DNA-directed RNA polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D RA11412_2584 DNA-directed RNA polymerase beta subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D RA11412_2539 DNA-directed RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D RA11412_1872 DNA-directed RNA polymerase omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D RA11412_1152 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D RA11412_2462 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D RA11412_2463 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D RA11412_1416 DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RA11412_0481 DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RA11412_1855 DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RA11412_0022 DNA polymerase III delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RA11412_2338 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RA11412_0857 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RA11412_1609 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RA11412_0458 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RA11412_1270 RecA protein K03553 recA; recombination protein RecA
D RA11412_1914 holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D RA11412_1911 holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D RA11412_1915 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D RA11412_1868 helicase PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D RA11412_1515 exonuclease SbcC K03546 sbcC; DNA repair protein SbcC/Rad50
D RA11412_1514 exonuclease SbcD K03547 sbcD; DNA repair protein SbcD/Mre11
D RA11412_0727 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D RA11412_0482 DNA recombination repair protein RecF K03629 recF; DNA replication and repair protein RecF
D RA11412_2088 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D RA11412_2089 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D RA11412_0412 hypothetical protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D RA11412_1796 DNA recombination repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D RA11412_0853 recombination protein RecR K06187 recR; recombination protein RecR
D RA11412_1330 DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D RA11412_1331 DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D RA11412_1574 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1
D RA11412_0486 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D RA11412_2204 topoisomerase IV subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D RA11412_0485 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D RA11412_2217 topoisomerase IV subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D RA11412_0935 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D RA11412_2790 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D RA11412_0755 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D RA11412_1386 DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D RA11412_1288 SOS-response repressor and protease LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D RA11412_1286 DinG family ATP-dependent helicase YoaA K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D RA11412_0047 probable ATP-dependent helicase lhr K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
D RA11412_2640 MutT1 K23258 mutT1; 8-oxo-(d)GTP phosphatase [EC:3.6.1.69]
D RA11412_1333 ADP-ribose pyrophosphatase K01554 K01554; 8-oxo-dGDP phosphatase [EC:3.6.1.58]
D RA11412_1980 ribonucleotide reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D RA11412_1981 ribonucleotide reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D RA11412_1978 ribonucleotide reductase K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:raj03029]
D RA11412_1239 translation initiation factor 2 K02519 infB; translation initiation factor IF-2
D RA11412_1296 translation initiation factor 3 K02520 infC; translation initiation factor IF-3
D RA11412_1218 translation elongation factor Ts K02357 tsf; elongation factor Ts
D RA11412_2576 translation elongation factor Tu K02358 tuf; elongation factor Tu
D RA11412_2579 translation elongation factor G K02355 fusA; elongation factor G
D RA11412_1938 GTP-binding protein Era K03595 era; GTPase
D RA11412_1322 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RA11412_1860 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RA11412_1902 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RA11412_1204 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D RA11412_1450 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RA11412_1183 aspartyl-tRNA(Asn) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D RA11412_1184 aspartyl-tRNA(Asn) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D RA11412_1182 aspartyl-tRNA(Asn) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D RA11412_1609 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RA11412_0458 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RA11412_0992 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D RA11412_1356 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D RA11412_0993 heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE
D RA11412_1360 heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE
D RA11412_0151 heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RA11412_2505 heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RA11412_2506 heat shock protein 60 family co-chaperone GroES K04078 groES; chaperonin GroES
D RA11412_1947 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D RA11412_0995 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D RA11412_2308 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RA11412_2378 Mrp protein homolog K03593 mrp; ATP-binding protein involved in chromosome partitioning
D RA11412_1752 heme O synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
D RA11412_1753 cytochrome oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D RA11412_0475 inner membrane protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:raj02000]
D RA11412_2019 ABC transporter ATP-binding protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D RA11412_2017 ABC transporter ATP-binding protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D RA11412_1103 hypothetical protein K24846 pglK; ATP-binding cassette, subfamily B, bacterial PglK [EC:7.5.2.-]
D RA11412_0405 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D RA11412_0891 lipid A export ATP-binding/permease protein MsbA K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D RA11412_0887 hypothetical protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D RA11412_0404 lipid A export ATP-binding/permease protein MsbA K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D RA11412_1185 transport ATP-binding protein CydD K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D RA11412_2214 transport ATP-binding protein CydCD K16014 cydCD; ATP-binding cassette, subfamily C, bacterial CydCD
D RA11412_1098 ATPase components of ABC transporter K15738 uup; ABC transport system ATP-binding/permease protein
D RA11412_2604 molybdenum ABC transporter K02020 modA; molybdate transport system substrate-binding protein
D RA11412_2603 molybdenum transport system permease protein ModB K02018 modB; molybdate transport system permease protein
D RA11412_0787 alkanesulfonates-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D RA11412_0786 alkanesulfonates transport system permease protein K15554 ssuC; sulfonate transport system permease protein
D RA11412_0788 alkanesulfonates ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D RA11412_2465 L-proline glycine betaine binding ABC transporter protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D RA11412_0811 L-proline glycine betaine binding ABC transporter protein ProX K05845 opuC; osmoprotectant transport system substrate-binding protein
D RA11412_0809 L-proline glycine betaine ABC transport system permease protein ProW K05846 opuBD; osmoprotectant transport system permease protein
D RA11412_0810 glycine betaine ABC transport system permease protein K05846 opuBD; osmoprotectant transport system permease protein
D RA11412_0808 L-proline glycine betaine ABC transport system permease protein ProV K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D RA11412_2617 maltose/maltodextrin transport ATP-binding protein MalK K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D RA11412_2387 glutamate binding protein K10005 gluB; glutamate transport system substrate-binding protein
D RA11412_2388 ABC-type amino acid transport system K10006 gluC; glutamate transport system permease protein
D RA11412_2389 permease protein of ABC transporter K10007 gluD; glutamate transport system permease protein
D RA11412_2386 ABC transporter related K10008 gluA; glutamate transport system ATP-binding protein [EC:7.4.2.1]
D RA11412_0184 methionine ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D RA11412_0182 methionine ABC transporter permease protein K02072 metI; D-methionine transport system permease protein
D RA11412_0183 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D RA11412_2683 ABC-type amino acid transport/signal transduction systems K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D RA11412_2684 polar amino acid ABC transporter K02029 ABC.PA.P; polar amino acid transport system permease protein
D RA11412_2685 methionine ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D RA11412_0828 oligopeptide ABC transporter K13889 gsiB; glutathione transport system substrate-binding protein
D RA11412_0826 oligopeptide transport system permease protein OppC K13891 gsiD; glutathione transport system permease protein
D RA11412_0827 oligopeptide transport ATP-binding protein OppD K13892 gsiA; glutathione transport system ATP-binding protein
D RA11412_1526 dipeptide-binding ABC transporter K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RA11412_0829 oligopeptide ABC transporter K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RA11412_0840 heme ABC transporter K25132 hmuT; heme transport system substrate-binding protein
D RA11412_0836 heme ABC transporter K10834 hmuV; heme transport system ATP-binding protein [EC:7.6.2.5]
D RA11412_2149 hypothetical protein K25286 fagD; iron-siderophore transport system substrate-binding protein
D RA11412_2146 ABC-type Fe3+-siderophore transport system K23186 fepD; iron-siderophore transport system permease protein
D RA11412_2145 ABC-type enterobactin transport system K23187 fepG; iron-siderophore transport system permease protein
D RA11412_2144 methionine ABC transporter ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D RA11412_1782 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D RA11412_0683 manganese ABC transporter SitA K11601 mntC; manganese transport system substrate-binding protein
D RA11412_0685 manganese ABC transporter SitD K11602 mntB; manganese transport system permease protein
D RA11412_0684 manganese ABC transporter SitB K11603 mntA; manganese transport system ATP-binding protein [EC:7.2.2.5]
D RA11412_0378 manganese ABC transporter K09819 ABC.MN.P; manganese/iron transport system permease protein
D RA11412_1772 substrate-specific component BioY K03523 bioY; biotin transport system substrate-specific component
D RA11412_1770 transmembrane component BioN K16783 bioN; biotin transport system permease protein
D RA11412_1771 ATPase component BioM K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-]
D RA11412_2020 substrate-specific component BL0695 K16926 htsT; energy-coupling factor transport system substrate-specific component
D RA11412_2737 transmembrane component YkoC K16785 ecfT; energy-coupling factor transport system permease protein
D RA11412_2022 transmembrane component BL0694 K16785 ecfT; energy-coupling factor transport system permease protein
D RA11412_2021 duplicated ATPase component BL0693 K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D RA11412_2740 substrate-specific component YkoE K16925 ykoE; energy-coupling factor transport system permease protein
D RA11412_2255 hypothetical protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein
D RA11412_2253 Zinc ABC transporter inner membrane permease protein ZnuB K02075 ABC.ZM.P; zinc/manganese transport system permease protein
D RA11412_2254 Zinc ABC transporter ATP-binding protein ZnuC K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein
D RA11412_1445 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D RA11412_1446 ABC-type multidrug transport system K01992 ABC-2.P; ABC-2 type transport system permease protein
D RA11412_2284 O-antigen export system permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D RA11412_2454 putative membrane protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D RA11412_0292 ABC transporter permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D RA11412_1193 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D RA11412_1194 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D RA11412_1489 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D RA11412_1754 ABC-type multidrug transport system permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D RA11412_0449 ABC transporter integral membrane subunit K01992 ABC-2.P; ABC-2 type transport system permease protein
D RA11412_1447 ABC-type multidrug transport system K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RA11412_1449 ABC-type multidrug transport system ATP-binding component yhiH K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RA11412_2453 methionine ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RA11412_0291 lipid A export ATP-binding/permease protein MsbA K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RA11412_1195 ABC transporter ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RA11412_0450 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RA11412_2282 methionine ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RA11412_1488 ABC-type multidrug transport system ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RA11412_1755 ABC-type multidrug transport system ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RA11412_1539 hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein
D RA11412_1541 hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein
D RA11412_1543 putative ABC transporter integral membrane protein K02004 ABC.CD.P; putative ABC transport system permease protein
D RA11412_0173 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D RA11412_0177 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D RA11412_1540 putative ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D RA11412_1542 putative ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D RA11412_1761 iron-sulfur cluster assembly ATPase protein SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D RA11412_0589 membrane protein K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D RA11412_0274 multi antimicrobial extrusion protein K18908 mepA; MATE family, multidrug efflux pump
D RA11412_0275 multi antimicrobial extrusion protein K18908 mepA; MATE family, multidrug efflux pump
D RA11412_0646 hypothetical protein K26937 dinF; MATE family, multidrug efflux pump
D RA11412_0315 major myo-inositol transporter IolT K06609 iolT; MFS transporter, SP family, major inositol transporter
D RA11412_2591 nitrate/nitrite transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D RA11412_2592 nitrate/nitrite transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D RA11412_0984 multidrug resistance transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D RA11412_0561 quinolone resistance protein norA K19576 norA; MFS transporter, DHA1 family, quinolone resistance protein
D RA11412_0395 proton antiporter efflux pump K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein
D RA11412_2743 hypothetical protein K06902 UMF1; MFS transporter, UMF1 family
D RA11412_2654 niacin transporter NiaP K08369 ydjE; MFS transporter, putative metabolite:H+ symporter
D RA11412_0163 phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D RA11412_2413 hypothetical protein K02784 ptsH; phosphocarrier protein HPr
D RA11412_0162 phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D RA11412_0639 glucose-specific IIA component protein K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D RA11412_2612 sucrose-specific IIB component protein K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D RA11412_2613 sucrose-specific IIB component protein K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D RA11412_0833 phosphotransferase system IIC component K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D RA11412_2485 maltose and glucose-specific IIC component protein K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-]
D RA11412_0164 fructose-specific IIA component protein K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D RA11412_0516 mannose-specific IID component protein K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D RA11412_0515 mannose-specific IID component protein K02795 manY; mannose PTS system EIIC component
D RA11412_0514 mannose-specific IID component protein K02796 manZ; mannose PTS system EIID component
D RA11412_1362 glycerol uptake facilitator protein K02440 glpF; glycerol uptake facilitator
D RA11412_0559 glycerol uptake facilitator protein K02440 glpF; glycerol uptake facilitator
D RA11412_1924 potassium voltage-gated channel subfamily KQT K10716 kch; voltage-gated potassium channel
D RA11412_2529 large-conductance mechanosensitive channel K03282 mscL; large conductance mechanosensitive channel
D RA11412_0230 zinc transport protein ZntB K03284 corA; magnesium transporter
D RA11412_0555 hypothetical protein K06199 crcB; fluoride exporter
D RA11412_0556 CrcB protein K06199 crcB; fluoride exporter
D RA11412_2256 uncharacterized protein Rv1841c/MT1889 K03699 tlyC; magnesium and cobalt exporter, CNNM family
D RA11412_2257 magnesium and cobalt efflux protein CorC K03699 tlyC; magnesium and cobalt exporter, CNNM family
D RA11412_2406 lysine-specific permease K11733 lysP; lysine-specific permease
D RA11412_0999 D-serine/D-alanine/glycine transporter K11737 cycA; D-serine/D-alanine/glycine transporter
D RA11412_0632 L-asparagine permease K11738 ansP; L-asparagine permease
D RA11412_1249 D-serine/D-alanine/glycine transporter K16234 hutT; histidine transporter
D RA11412_2663 cobalt-zinc-cadmium resistance protein CzcD K16264 czcD; cobalt-zinc-cadmium efflux system protein
D RA11412_0280 permease K15269 pecM; probable blue pigment (indigoidine) exporter
D RA11412_0207 hypothetical protein K11939 rhtA; inner membrane transporter RhtA
D RA11412_0208 hypothetical protein K11939 rhtA; inner membrane transporter RhtA
D RA11412_2246 glucose uptake protein K05340 glcU; glucose uptake protein
D RA11412_2677 protein rarD K05786 rarD; chloramphenicol-sensitive protein RarD
D RA11412_1348 L-lactate permease K03303 lutP; lactate permease
D RA11412_1349 L-lactate permease K03303 lutP; lactate permease
D RA11412_0863 L-lactate permease K03303 lutP; lactate permease
D RA11412_1711 glycine betaine transporter OpuD K05020 opuD; glycine betaine transporter
D RA11412_1712 glycine betaine transporter OpuD K05020 opuD; glycine betaine transporter
D RA11412_2618 tellurite resistance protein TehA K03304 tehA; tellurite resistance protein
D RA11412_2704 proline/sodium symporter PutP K11928 putP; sodium/proline symporter
D RA11412_1335 C4-dicarboxylate-transport transmembrane protein DctA K11103 dctA; aerobic C4-dicarboxylate transport protein
D RA11412_0419 Na+/H+ antiporter NhaA type K03313 nhaA; Na+:H+ antiporter, NhaA family
D RA11412_0284 Na+/H+ antiporter K24163 nhaK; monovalent cation/hydrogen antiporter
D RA11412_0505 Na+/H+ antiporter K24163 nhaK; monovalent cation/hydrogen antiporter
D RA11412_0967 potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein
D RA11412_2184 Trk system potassium uptake protein TrkA K03499 trkA; trk/ktr system potassium uptake protein
D RA11412_2185 Trk system potassium uptake protein TrkA K03499 trkA; trk/ktr system potassium uptake protein
D RA11412_0965 Trk system potassium uptake protein TrkA K03499 trkA; trk/ktr system potassium uptake protein
D RA11412_0802 xanthine/uracil/thiamine/ascorbate permease family protein K06901 pbuG; adenine/guanine/hypoxanthine permease
D RA11412_0804 xanthine/uracil/thiamine/ascorbate permease family protein K06901 pbuG; adenine/guanine/hypoxanthine permease
D RA11412_0961 chloride channel protein K03281 clcA; chloride channel protein, CIC family
D RA11412_0463 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D RA11412_0464 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D RA11412_2407 branched-chain amino acid transport protein K26605 azlC; branched chain amino acid efflux pump
D RA11412_2408 hypothetical protein K26606 azlD; branched chain amino acid efflux pump
D RA11412_1047 putative permease K20469 K20469; putative heme transporter
D RA11412_0067 putative preQ0 transporter K09125 yhhQ; queuosine precursor transporter
D RA11412_0105 hypothetical protein K22736 VIT; vacuolar iron transporter family protein
D RA11412_1304 ferrous iron transport permease EfeU K07243 FTR; high-affinity iron transporter
D RA11412_1305 ferrous iron transport periplasmic protein EfeO K07224 efeO; iron uptake system component EfeO
D RA11412_1306 ferrous iron transport periplasmic protein EfeO K07224 efeO; iron uptake system component EfeO
D RA11412_1307 ferrous iron transport peroxidase EfeB K16301 efeB; deferrochelatase/peroxidase EfeB [EC:1.11.1.-]
D RA11412_0976 cytochrome C-type biogenesis protein CcdA K06196 ccdA; cytochrome c-type biogenesis protein
D RA11412_2597 respiratory nitrate reductase alpha chain K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D RA11412_2596 respiratory nitrate reductase beta chain K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D RA11412_2594 respiratory nitrate reductase gamma chain K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D RA11412_1629 riboflavin transporter PnuX K03811 pnuC; nicotinamide mononucleotide transporter
D RA11412_1628 riboflavin transporter PnuX K03811 pnuC; nicotinamide mononucleotide transporter
D RA11412_2775 copper resistance protein CopC K07156 copC; copper resistance protein C
C 02044 Secretion system [BR:raj02044]
D RA11412_1058 putative type IV peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D RA11412_2280 type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D RA11412_0910 Flp pilus assembly protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D RA11412_2279 Flp pilus assembly protein TadB K12510 tadB; tight adherence protein B
D RA11412_0911 hypothetical protein K12510 tadB; tight adherence protein B
D RA11412_0912 hypothetical protein K12510 tadB; tight adherence protein B
D RA11412_2278 type II/IV secretion system protein TadC K12511 tadC; tight adherence protein C
D RA11412_1411 possible membrane protein K02221 yggT; YggT family protein
D RA11412_1858 putative ComE operon protein 1 K02237 comEA; competence protein ComEA
D RA11412_1856 ComEC/Rec2-related protein K02238 comEC; competence protein ComEC
D RA11412_0344 putative traG-family protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D RA11412_2298 protein export cytoplasm protein SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RA11412_1908 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D RA11412_1907 protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D RA11412_1714 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D RA11412_2548 preprotein translocase secY subunit K03076 secY; preprotein translocase subunit SecY
D RA11412_2067 signal recognition particle K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D RA11412_2071 signal recognition particle receptor protein FtsY K03110 ftsY; fused signal recognition particle receptor
D RA11412_1909 hypothetical protein K03210 yajC; preprotein translocase subunit YajC
D RA11412_0475 inner membrane protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RA11412_1833 twin-arginine translocation protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D RA11412_2379 twin-arginine translocation protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D RA11412_1832 twin-arginine translocation protein TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:raj02042]
D RA11412_2256 uncharacterized protein Rv1841c/MT1889 K03699 tlyC; magnesium and cobalt exporter, CNNM family
D RA11412_2257 magnesium and cobalt efflux protein CorC K03699 tlyC; magnesium and cobalt exporter, CNNM family
C 02022 Two-component system [BR:raj02022]
D RA11412_0010 phosphate regulon transcriptional regulatory protein PhoB K07776 regX3; two-component system, OmpR family, response regulator RegX3
D RA11412_2303 sensor histidine kinase MtrB K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3]
D RA11412_2304 phosphate regulon transcriptional regulatory protein PhoB K07670 mtrA; two-component system, OmpR family, response regulator MtrA
D RA11412_0125 osmosensitive K+ channel histidine kinase KdpD K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D RA11412_0126 osmosensitive K+ channel histidine kinase KdpD K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D RA11412_0547 osmosensitive K+ channel histidine kinase KdpD K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D RA11412_0124 response regulator receiver K02483 K02483; two-component system, OmpR family, response regulator
D RA11412_0545 two-component system response regulator K02483 K02483; two-component system, OmpR family, response regulator
D RA11412_2455 sensor histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D RA11412_2458 putative two-component system sensor kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D RA11412_2456 putative two-component system response regulator K07693 desR; two-component system, NarL family, response regulator DesR
D RA11412_2457 putative two-component system response regulator K07693 desR; two-component system, NarL family, response regulator DesR
D RA11412_2292 serine phosphatase RsbU K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3]
D RA11412_1656 response regulator K22010 pdtaR; two-component system, response regulator PdtaR
C 02035 Bacterial motility proteins [BR:raj02035]
D RA11412_1058 putative type IV peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D RA11412_2280 type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D RA11412_0910 Flp pilus assembly protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:raj04812]
D RA11412_1407 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D RA11412_0472 chromosome (plasmid) partitioning protein ParA K03496 parA; chromosome partitioning protein
D RA11412_1336 chromosome (plasmid) partitioning protein ParA K03496 parA; chromosome partitioning protein
D RA11412_1373 ATPase K03496 parA; chromosome partitioning protein
D RA11412_0470 chromosome (plasmid) partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:raj04147]
D RA11412_1035 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RA11412_0604 NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RA11412_1708 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RA11412_1709 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D RA11412_1655 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RA11412_0495 peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D RA11412_0151 heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RA11412_2505 heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RA11412_0992 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D RA11412_1356 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D RA11412_2397 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RA11412_2503 inosine-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D RA11412_2504 inosine-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D RA11412_2576 translation elongation factor Tu K02358 tuf; elongation factor Tu
D RA11412_1794 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D RA11412_0589 membrane protein K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D RA11412_0185 long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RA11412_1318 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RA11412_1377 long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RA11412_2138 hypothetical protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RA11412_2547 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D RA11412_1320 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D RA11412_0502 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D RA11412_1361 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D RA11412_2245 glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RA11412_1426 glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RA11412_2351 porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D RA11412_1012 IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D RA11412_2234 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RA11412_2310 electron transfer flavoprotein K03522 fixB; electron transfer flavoprotein alpha subunit
D RA11412_1745 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D RA11412_1710 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D RA11412_0014 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:raj02048]
D RA11412_1574 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1
D RA11412_1557 CRISPR-associated helicase Cas3 K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D RA11412_1558 CRISPR-associated protein K19123 casA; CRISPR system Cascade subunit CasA
D RA11412_1568 CRISPR-associated protein K19123 casA; CRISPR system Cascade subunit CasA
D RA11412_1560 CRISPR-associated protein K19124 casC; CRISPR system Cascade subunit CasC
D RA11412_1570 CRISPR-associated protein K19124 casC; CRISPR system Cascade subunit CasC
D RA11412_1571 CRISPR-associated protein K19125 casD; CRISPR system Cascade subunit CasD
D RA11412_1687 type I restriction-modification system K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D RA11412_1691 type I restriction-modification system K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D RA11412_1692 type I restriction-modification system K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D RA11412_2447 type I restriction-modification system K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D RA11412_2130 DNA decomposition enzyme K07452 mcrB; 5-methylcytosine-specific restriction enzyme B [EC:3.1.21.-]
D RA11412_2131 DNA decomposition enzyme K07452 mcrB; 5-methylcytosine-specific restriction enzyme B [EC:3.1.21.-]
D RA11412_1898 hypothetical protein K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB
D RA11412_0700 hypothetical protein K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB
D RA11412_1432 YefM protein K19159 yefM; antitoxin YefM
D RA11412_0178 plasmid stability-like protein K07062 fitB; toxin FitB [EC:3.1.-.-]
D RA11412_1007 hypothetical protein K07062 fitB; toxin FitB [EC:3.1.-.-]
D RA11412_1407 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D RA11412_1554 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RA11412_2703 glutamyl-Q-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RA11412_2308 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:raj01504]
D RA11412_2330 putative phosphotransferase K06979 mph; macrolide phosphotransferase
D RA11412_0395 proton antiporter efflux pump K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein
D RA11412_2528 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D RA11412_2137 hypothetical protein K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D RA11412_0274 multi antimicrobial extrusion protein K18908 mepA; MATE family, multidrug efflux pump
D RA11412_0275 multi antimicrobial extrusion protein K18908 mepA; MATE family, multidrug efflux pump
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:raj03100]
D RA11412_2838 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RA11412_2811 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RA11412_2813 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RA11412_2835 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RA11412_2829 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RA11412_2804 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RA11412_2803 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RA11412_2824 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D RA11412_2818 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D RA11412_2846 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D RA11412_2844 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D RA11412_2823 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D RA11412_2817 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D RA11412_2833 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D RA11412_2843 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D RA11412_2854 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RA11412_2832 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RA11412_2847 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RA11412_2840 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RA11412_2834 tRNA-His K14226 tRNA-His; tRNA His
D RA11412_2810 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D RA11412_2837 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RA11412_2830 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RA11412_2822 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RA11412_2836 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RA11412_2807 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RA11412_2815 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D RA11412_2831 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D RA11412_2848 tRNA-Met K14230 tRNA-Met; tRNA Met
D RA11412_2851 tRNA-Met K14230 tRNA-Met; tRNA Met
D RA11412_2825 tRNA-Met K14230 tRNA-Met; tRNA Met
D RA11412_2819 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D RA11412_2821 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D RA11412_2839 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D RA11412_2820 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RA11412_2816 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RA11412_2850 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RA11412_2855 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RA11412_2805 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RA11412_2806 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RA11412_2852 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RA11412_2849 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D RA11412_2853 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D RA11412_2841 tRNA-Val K14237 tRNA-Val; tRNA Val
D RA11412_2845 tRNA-Val K14237 tRNA-Val; tRNA Val
D RA11412_2842 tRNA-Val K14237 tRNA-Val; tRNA Val
D RA11412_2809 small subunit ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RA11412_2826 small subunit ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RA11412_2802 small subunit ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RA11412_2808 large subunit ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RA11412_2801 large subunit ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RA11412_2827 large subunit ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RA11412_2812 5S RNA K01985 5SrRNA; 5S ribosomal RNA
D RA11412_2800 5S RNA K01985 5SrRNA; 5S ribosomal RNA
D RA11412_2814 5S RNA K01985 5SrRNA; 5S ribosomal RNA
D RA11412_2828 5S RNA K01985 5SrRNA; 5S ribosomal RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D RA11412_1519 formaldehyde dehydrogenase MscR K00153 E1.1.1.306; S-(hydroxymethyl)mycothiol dehydrogenase [EC:1.1.1.306]
D RA11412_1002 oxidoreductase of aldo/keto reductase family K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D RA11412_2079 NAD(P)H steroid dehydrogenase-like protein K22320 oleD; 2-alkyl-3-oxoalkanoate reductase [EC:1.1.1.412]
D RA11412_0317 oxidoreductase K23107 yajO; 1-deoxyxylulose-5-phosphate synthase [EC:1.1.-.-]
D RA11412_1157 dihydrolipoamide dehydrogenase K23842 lpdA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D RA11412_1437 zinc-containing alcohol dehydrogenase and quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D RA11412_0722 quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D RA11412_0599 hypothetical protein K03923 mdaB; NADPH dehydrogenase (quinone) [EC:1.6.5.10]
D RA11412_0276 FMN-dependent NADH-azoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D RA11412_1375 NADPH-dependent mycothiol reductase Mtr K17883 mtr; mycothione reductase [EC:1.8.1.15]
D RA11412_1595 peptide methionine sulfoxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D RA11412_2170 peptide methionine sulfoxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D RA11412_0870 hypothetical protein K07147 msrP; methionine sulfoxide reductase catalytic subunit [EC:1.8.-.-]
D RA11412_2772 iron-dependent peroxidase K15733 E1.11.1.19; dye decolorizing peroxidase [EC:1.11.1.19]
D RA11412_1527 thiol peroxidase K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D RA11412_2410 thiol peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D RA11412_0764 alkylhydroperoxidase protein D K04756 ahpD; lipoyl-dependent peroxiredoxin subunit D [EC:1.11.1.28]
D RA11412_0765 alkyl hydroperoxide reductase protein C K24126 ahpC; lipoyl-dependent peroxiredoxin subunit C [EC:1.11.1.28]
D RA11412_0033 flavohemoprotein K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17]
D RA11412_0789 coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase K20938 ladA; long-chain alkane monooxygenase [EC:1.14.14.28]
D RA11412_2055 hypothetical protein K21481 mhuD; heme oxygenase (mycobilin-producing) [EC:1.14.99.57]
D RA11412_0807 ferredoxin-NADP(+) reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D RA11412_0500 hypothetical protein K18917 mrx1; mycoredoxin [EC:1.20.4.3]
D RA11412_2209 protease synthase and sporulation negative regulatory protein pai 1 K22441 paiA; diamine N-acetyltransferase [EC:2.3.1.57]
D RA11412_0188 maltose O-acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79]
D RA11412_0189 maltose O-acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79]
D RA11412_2635 acetyl-CoA:Cys-GlcN-Ins acetyltransferase K15520 mshD; mycothiol synthase [EC:2.3.1.189]
D RA11412_2075 3-oxoacyl-[ACP] synthase III K22317 oleA; acyl-CoA:acyl-CoA alkyltransferase [EC:2.3.3.20]
D RA11412_2519 glycosyltransferase MshA K15521 mshA; D-inositol-3-phosphate glycosyltransferase [EC:2.4.1.250]
D RA11412_1640 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D RA11412_2092 Dak phosphatase K07030 fakA; fatty acid kinase [EC:2.7.2.18]
D RA11412_1427 glutamate-ammonia-ligase adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D RA11412_0726 DNA integrity scanning protein disA K07067 disA; diadenylate cyclase [EC:2.7.7.85]
D RA11412_0907 phosphoenolpyruvate synthase K22579 rph; rifampicin phosphotransferase [EC:2.7.9.6]
D RA11412_1380 putative esterase/lipase K03928 yvaK; carboxylesterase [EC:3.1.1.1]
D RA11412_0063 hypothetical protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D RA11412_2368 predicted metal-dependent phosphoesterase K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D RA11412_0218 phosphohistidine phosphatase SixA K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D RA11412_1083 putative deoxyribonuclease YcfH K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D RA11412_1477 hypothetical protein K07503 nucS; endonuclease [EC:3.1.-.-]
D RA11412_2621 N-acetylmuramoyl-L-alanine amidase K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D RA11412_1603 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D RA11412_2155 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D RA11412_2392 N-acetyl-1-D-myo-inosityl-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase MshB K15525 mshB; N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase [EC:3.5.1.103]
D RA11412_1986 uricase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D RA11412_1053 mycothiol S-conjugate amidase Mca K18455 mca; mycothiol S-conjugate amidase [EC:3.5.1.115]
D RA11412_2076 haloalkane dehalogenase-like protein K22318 oleB; cis-3-alkyl-4-acyloxetan-2-one decarboxylase [EC:4.1.1.114]
D RA11412_0565 pyruvate decarboxylase K21431 kdc; alpha-keto-acid decarboxylase [EC:4.1.1.-]
D RA11412_2077 haloalkane dehalogenase-like protein K22319 oleC; olefin beta-lactone synthetase [EC:6.1.3.1]
D RA11412_1933 L-cysteine:1D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase MshC K15526 mshC; L-cysteine:1D-myo-inositol 2-amino-2-deoxy-alpha-D-glucopyranoside ligase [EC:6.3.1.13]
D RA11412_0835 hypothetical protein K12952 ctpE; cation-transporting P-type ATPase E [EC:7.2.2.-]
C 99981 Carbohydrate metabolism
D RA11412_1927 predicted D-lactate dehydrogenase K18928 lldE; L-lactate dehydrogenase complex protein LldE
D RA11412_0864 predicted L-lactate dehydrogenase K18928 lldE; L-lactate dehydrogenase complex protein LldE
D RA11412_0865 predicted L-lactate dehydrogenase K18929 lldF; L-lactate dehydrogenase complex protein LldF
D RA11412_0866 predicted L-lactate dehydrogenase K18929 lldF; L-lactate dehydrogenase complex protein LldF
D RA11412_0867 predicted L-lactate dehydrogenase K00782 lldG; L-lactate dehydrogenase complex protein LldG
C 99982 Energy metabolism
D RA11412_1137 putative iron-sulfur cluster assembly scaffold protein K04488 iscU; nitrogen fixation protein NifU and related proteins
D RA11412_2311 electron transfer flavoprotein K03521 fixA; electron transfer flavoprotein beta subunit
D RA11412_0138 putative dihydrolipoamide dehydrogenase K21739 rclA; probable pyridine nucleotide-disulfide oxidoreductase
C 99983 Lipid metabolism
D RA11412_1859 hypothetical protein K25232 fakB; fatty acid kinase fatty acid binding subunit
C 99984 Nucleotide metabolism
D RA11412_1982 ribonucleotide reduction protein NrdI K03647 nrdI; protein involved in ribonucleotide reduction
C 99985 Amino acid metabolism
D RA11412_1409 hypothetical protein YggS K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D RA11412_1181 hypothetical protein K21687 rpfA; resuscitation-promoting factor RpfA
D RA11412_1085 hypothetical protein K07270 K07270; glycosyl transferase, family 25
D RA11412_1086 hypothetical protein K07270 K07270; glycosyl transferase, family 25
C 99987 Cofactor metabolism
C 99988 Secondary metabolism
C 99999 Others
D RA11412_1042 hypothetical protein K15977 K15977; putative oxidoreductase
D RA11412_1201 phospholipase/carboxylesterase K06999 K06999; phospholipase/carboxylesterase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D RA11412_1001 transcription accessory protein K06959 tex; protein Tex
C 99974 Translation
C 99975 Protein processing
D RA11412_1505 ATP-dependent Clp protease adaptor protein ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D RA11412_2045 cell division trigger factor K03545 tig; trigger factor
D RA11412_2269 tmRNA-binding protein SmpB K03664 smpB; SsrA-binding protein
D RA11412_1983 glutaredoxin-like protein NrdH K06191 nrdH; glutaredoxin-like protein NrdH
D RA11412_1617 Mg(2+) chelatase family protein K07391 comM; magnesium chelatase family protein
D RA11412_0978 Ccs1/ResB-related putative cytochrome C-type biogenesis protein K07399 resB; cytochrome c biogenesis protein
C 99976 Replication and repair
D RA11412_1618 Rossmann fold nucleotide-binding protein Smf K04096 smf; DNA processing protein
D RA11412_1897 ATPase K07478 ycaJ; putative ATPase
D RA11412_0254 mobile element protein K07486 K07486; transposase
D RA11412_0703 mobile element protein K07496 K07496; putative transposase
D RA11412_0876 mobile element protein K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D RA11412_2315 phage shock protein A K03969 pspA; phage shock protein A
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D RA11412_0064 amino acid permease-associated region K03293 TC.AAT; amino acid transporter, AAT family
D RA11412_0617 di-/tripeptide transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D RA11412_0736 probable low-affinity inorganic phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family
D RA11412_0489 probable low-affinity inorganic phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family
D RA11412_2679 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D RA11412_0424 amino-acid carrier protein AlsT K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D RA11412_1961 2-oxoglutarate/malate translocator K03319 TC.DASS; divalent anion:Na+ symporter, DASS family
C 99978 Cell growth
D RA11412_1106 hypothetical protein K06320 cgeB; spore maturation protein CgeB
D RA11412_0474 RNA-binding protein Jag K06346 jag; spoIIIJ-associated protein
D RA11412_2451 recombinase K06400 spoIVCA; site-specific DNA recombinase
C 99993 Cell motility
C 99995 Signaling proteins
D RA11412_0331 tellurium resistance protein TerD K05795 terD; tellurium resistance protein TerD
D RA11412_0333 tellurium resistance protein TerD K05795 terD; tellurium resistance protein TerD
D RA11412_0335 tellurium resistance protein TerD K05791 terZ; tellurium resistance protein TerZ
D RA11412_2393 GTP-binding protein TypA/BipA K06207 typA; GTP-binding protein
D RA11412_0027 ACT domain protein K07166 K07166; ACT domain-containing protein
D RA11412_1944 phosphate starvation-inducible protein PhoH K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D RA11412_2670 hypothetical protein YajQ K09767 yajQ; cyclic-di-GMP-binding protein
C 99992 Structural proteins
C 99994 Others
B
B 09194 Poorly characterized
C 99996 General function prediction only
D RA11412_2247 acetyltransferase K02348 elaA; ElaA protein
D RA11412_0917 helicase K06877 K06877; DEAD/DEAH box helicase domain-containing protein
D RA11412_2052 hemoglobin-like protein HbO K06886 glbN; hemoglobin
D RA11412_0550 hypothetical protein K06994 K06994; putative drug exporter of the RND superfamily
D RA11412_0551 hypothetical protein K06994 K06994; putative drug exporter of the RND superfamily
D RA11412_0553 hypothetical protein K06994 K06994; putative drug exporter of the RND superfamily
D RA11412_1757 iron-sulfur cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D RA11412_1760 iron-sulfur cluster assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD
D RA11412_1522 ribonuclease BN K07058 K07058; membrane protein
D RA11412_0919 rhodanese domain protein UPF0176 K07146 K07146; UPF0176 protein
D RA11412_0308 PhnB protein K04750 phnB; PhnB protein
D RA11412_0751 DedA protein K03975 dedA; membrane-associated protein
D RA11412_1350 hypothetical protein K08987 K08987; putative membrane protein
D RA11412_0806 probable integral membrane protein Cj0014c K08996 yagU; putative membrane protein
D RA11412_0790 hypothetical protein K09858 K09858; SEC-C motif domain protein
C 99997 Function unknown
D RA11412_1317 ankyrin K06867 K06867; uncharacterized protein
D RA11412_0761 CoA-binding domain protein K06929 K06929; uncharacterized protein
D RA11412_2063 KH domain RNA binding protein YlqC K06960 K06960; uncharacterized protein
D RA11412_1232 N-acetyltransferase K06976 K06976; uncharacterized protein
D RA11412_0933 hypothetical protein K07005 K07005; uncharacterized protein
D RA11412_1483 hypothetical protein K07018 K07018; uncharacterized protein
D RA11412_0667 hypothetical protein K07075 K07075; uncharacterized protein
D RA11412_0139 Rrf2-linked NADH-flavin reductase K07118 K07118; uncharacterized protein
D RA11412_1676 Rrf2-linked NADH-flavin reductase K07118 K07118; uncharacterized protein
D RA11412_1993 3-oxoacyl-[acyl-carrier protein] reductase K07124 K07124; uncharacterized protein
D RA11412_0616 hypothetical protein K07133 K07133; uncharacterized protein
D RA11412_0476 protein YidD K08998 K08998; uncharacterized protein
D RA11412_1037 hypothetical protein K09009 K09009; uncharacterized protein
D RA11412_2318 integral membrane protein K09118 K09118; uncharacterized protein
D RA11412_0026 hypothetical protein K09157 K09157; uncharacterized protein
D RA11412_1173 hypothetical protein K09780 K09780; uncharacterized protein
D RA11412_0334 integral membrane protein K09799 K09799; uncharacterized protein
D RA11412_1601 UPF0246 protein YaaA K09861 K09861; uncharacterized protein
D RA11412_1949 hypothetical protein K09940 K09940; uncharacterized protein
D RA11412_0261 hypothetical protein K09940 K09940; uncharacterized protein
D RA11412_0270 hypothetical protein K09940 K09940; uncharacterized protein
D RA11412_0271 hypothetical protein K09940 K09940; uncharacterized protein
D RA11412_0805 hypothetical protein K09956 K09956; uncharacterized protein
!
#
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 23, 2024