+D GENES KO #

  KEGG Orthology (KO) - Rickettsia asiatica

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:ras00010] D RAS_05660 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D RAS_04140 pdhA; pyruvate dehydrogenase E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D RAS_04150 pdhB; pyruvate dehydrogenase E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D RAS_05380 pdhC; dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D RAS_05020 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D RAS_13730 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 00020 Citrate cycle (TCA cycle) [PATH:ras00020] D RAS_14540 gltA; citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D RAS_13670 acnA; aconitate hydratase A K01681 ACO; aconitate hydratase [EC:4.2.1.3] D RAS_04200 icd; isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D RAS_02940 sucA; 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D RAS_02930 sucB; dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D RAS_05020 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D RAS_13730 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D RAS_06620 sucD; succinate--CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D RAS_06610 sucC; succinate--CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D RAS_00770 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D RAS_02160 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D RAS_00790 sdhC; succinate dehydrogenase cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D RAS_00780 sdhD; succinate dehydrogenase hydrophobic membrane anchor subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit D RAS_11320 fumC; fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D RAS_07440 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D RAS_04140 pdhA; pyruvate dehydrogenase E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D RAS_04150 pdhB; pyruvate dehydrogenase E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D RAS_05380 pdhC; dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] C 00030 Pentose phosphate pathway D RAS_08770 putative sugar phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] C 00040 Pentose and glucuronate interconversions D RAS_13450 udg; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] C 00051 Fructose and mannose metabolism [PATH:ras00051] D RAS_05870 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D RAS_11730 hypothetical protein K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D RAS_08770 putative sugar phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] C 00052 Galactose metabolism D RAS_08190 capD; UDP-glucose 4-epimerase K17716 capD; UDP-glucose 4-epimerase [EC:5.1.3.2] C 00053 Ascorbate and aldarate metabolism D RAS_13450 udg; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] C 00500 Starch and sucrose metabolism [PATH:ras00500] D RAS_12290 ATP-dependent protease K05349 bglX; beta-glucosidase [EC:3.2.1.21] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:ras00520] D RAS_10800 hypothetical protein K01183 E3.2.1.14; chitinase [EC:3.2.1.14] D RAS_04930 UDP-N-acetylglucosamine pyrophosphorylase K11528 glmU; UDP-N-acetylglucosamine pyrophosphorylase [EC:2.7.7.23] D RAS_10010 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D RAS_03990 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D RAS_08180 UDP-N-acetyl glucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D RAS_13450 udg; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D RAS_08190 capD; UDP-glucose 4-epimerase K17716 capD; UDP-glucose 4-epimerase [EC:5.1.3.2] D RAS_05870 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D RAS_11730 hypothetical protein K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] C 00620 Pyruvate metabolism [PATH:ras00620] D RAS_04140 pdhA; pyruvate dehydrogenase E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D RAS_04150 pdhB; pyruvate dehydrogenase E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D RAS_05380 pdhC; dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D RAS_05020 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D RAS_13730 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D RAS_00990 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D RAS_07570 putative NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D RAS_07440 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D RAS_11320 fumC; fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D RAS_05660 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:ras00630] D RAS_07440 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D RAS_14540 gltA; citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D RAS_13670 acnA; aconitate hydratase A K01681 ACO; aconitate hydratase [EC:4.2.1.3] D RAS_02300 hypothetical protein K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36] D RAS_10680 propionyl-CoA carboxylase subunit alpha K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3] D RAS_10690 propionyl-CoA carboxylase subunit beta K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15] D RAS_05750 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D RAS_12690 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D RAS_05020 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D RAS_13730 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 00640 Propanoate metabolism [PATH:ras00640] D RAS_00990 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D RAS_05020 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D RAS_13730 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D RAS_10680 propionyl-CoA carboxylase subunit alpha K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3] D RAS_10690 propionyl-CoA carboxylase subunit beta K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15] D RAS_06610 sucC; succinate--CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D RAS_06620 sucD; succinate--CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] C 00650 Butanoate metabolism [PATH:ras00650] D RAS_09580 hypothetical protein K00022 HADH; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D RAS_11750 hypothetical protein K05973 phaZ; poly(3-hydroxybutyrate) depolymerase [EC:3.1.1.75] D RAS_02300 hypothetical protein K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36] D RAS_00770 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D RAS_02160 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D RAS_00790 sdhC; succinate dehydrogenase cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D RAS_00780 sdhD; succinate dehydrogenase hydrophobic membrane anchor subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit C 00660 C5-Branched dibasic acid metabolism D RAS_06610 sucC; succinate--CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D RAS_06620 sucD; succinate--CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] C 00562 Inositol phosphate metabolism [PATH:ras00562] D RAS_03890 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:ras00190] D RAS_07830 nuoA; NADH-quinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2] D RAS_07840 nuoB; NADH-quinone oxidoreductase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2] D RAS_07850 nuoC; NADH-quinone oxidoreductase subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2] D RAS_07860 nuoD; NADH-quinone oxidoreductase subunit D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2] D RAS_07870 nuoE; NADH-quinone oxidoreductase subunit E K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2] D RAS_00930 nuoF; NADH-quinone oxidoreductase subunit F K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2] D RAS_13650 nuoG; NADH-quinone oxidoreductase subunit G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2] D RAS_13630 nuoH; NADH-quinone oxidoreductase subunit H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2] D RAS_13620 nuoI; NADH-quinone oxidoreductase subunit I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2] D RAS_13570 nuoJ; NADH-quinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2] D RAS_13580 nuoK; NADH-quinone oxidoreductase subunit K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2] D RAS_13590 nuoL; NADH-quinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2] D RAS_13600 nuoM; NADH-quinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2] D RAS_09150 hypothetical protein K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2] D RAS_00770 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D RAS_02160 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D RAS_00790 sdhC; succinate dehydrogenase cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D RAS_00780 sdhD; succinate dehydrogenase hydrophobic membrane anchor subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit D RAS_04250 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D RAS_04260 petB; cytochrome b K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D RAS_04280 cytochrome c K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D RAS_08020 ctaB; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D RAS_03060 ctaE; putative cytochrome c oxidase subunit 3 K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9] D RAS_07060 ctaD; putative cytochrome c oxidase subunit 1 K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9] D RAS_07020 ctaC; putative cytochrome c oxidase subunit 2 K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9] D RAS_08710 ctaG; cytochrome c oxidase assembly protein CtaG K02258 COX11; cytochrome c oxidase assembly protein subunit 11 D RAS_04100 ctaA; heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9] D RAS_03580 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D RAS_03590 cytochrome D ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D RAS_04050 cycM; cytochrome c family protein K08738 CYC; cytochrome c D RAS_13710 atpA; ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D RAS_13690 atpD; ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D RAS_13700 atpG; ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D RAS_13720 atpH; ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D RAS_13680 atpC; ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D RAS_00430 atpB; ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a D RAS_00400 atpF; ATP synthase subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b D RAS_00410 F0F1 ATP synthase subunit B' K02109 ATPF0B; F-type H+-transporting ATPase subunit b D RAS_00420 atpE; ATP synthase subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c D RAS_10130 ppa; inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation by Calvin cycle [PATH:ras00710] D RAS_08770 putative sugar phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D RAS_05660 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D RAS_07570 putative NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D RAS_07440 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] C 00720 Other carbon fixation pathways [PATH:ras00720] D RAS_05660 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D RAS_07440 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D RAS_11320 fumC; fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D RAS_00770 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D RAS_02160 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D RAS_00790 sdhC; succinate dehydrogenase cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D RAS_00780 sdhD; succinate dehydrogenase hydrophobic membrane anchor subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit D RAS_06620 sucD; succinate--CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D RAS_06610 sucC; succinate--CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D RAS_04200 icd; isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D RAS_13670 acnA; aconitate hydratase A K01681 ACO; aconitate hydratase [EC:4.2.1.3] D RAS_06040 folD; bifunctional protein FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D RAS_00990 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] C 00680 Methane metabolism [PATH:ras00680] D RAS_12690 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D RAS_07440 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D RAS_00990 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] C 00910 Nitrogen metabolism [PATH:ras00910] D RAS_13090 glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D RAS_05750 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] C 00920 Sulfur metabolism D RAS_08810 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:ras00061] D RAS_13220 acpP; acyl carrier protein K02078 acpP; acyl carrier protein D RAS_12870 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D RAS_13360 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase 3 K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D RAS_13230 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D RAS_13210 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D RAS_00090 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D RAS_07730 fabI; enoyl-[acyl-carrier-protein] reductase [NADH] FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] C 00062 Fatty acid elongation [PATH:ras00062] D RAS_09580 hypothetical protein K00022 HADH; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] C 00071 Fatty acid degradation [PATH:ras00071] D RAS_09580 hypothetical protein K00022 HADH; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D RAS_10720 acyl-[ACP]--phospholipid O-acyltransferase K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism D RAS_05150 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 00564 Glycerophospholipid metabolism [PATH:ras00564] D RAS_06460 gpsA; glycerol-3-phosphate dehydrogenase [NAD(P)+] K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D RAS_05150 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D RAS_14110 pld; phospholipase D K17717 pld; phospholipase D [EC:3.1.4.4] D RAS_10720 acyl-[ACP]--phospholipid O-acyltransferase K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20] D RAS_06700 cdsA; phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D RAS_03920 CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D RAS_03910 psd; phosphatidylserine decarboxylase proenzyme K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D RAS_02090 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D RAS_12610 phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27] C 00565 Ether lipid metabolism D RAS_14110 pld; phospholipase D K17717 pld; phospholipase D [EC:3.1.4.4] C 00600 Sphingolipid metabolism C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism C 01040 Biosynthesis of unsaturated fatty acids [PATH:ras01040] D RAS_02240 acyl-CoA desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1] B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:ras00230] D RAS_03630 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D RAS_05740 laccase domain protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D RAS_02000 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D RAS_13300 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D RAS_05930 ribonucleoside-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D RAS_05900 ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D RAS_01610 deoxyguanosinetriphosphate triphosphohydrolase-like protein K01129 dgt; dGTPase [EC:3.1.5.1] D RAS_04360 hypothetical protein K21138 HDDC3; guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [EC:3.1.7.2] D RAS_12510 hypothetical protein K21138 HDDC3; guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [EC:3.1.7.2] D RAS_09100 hypothetical protein K21138 HDDC3; guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [EC:3.1.7.2] D RAS_10060 hypothetical protein K21138 HDDC3; guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [EC:3.1.7.2] D RAS_08920 exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D RAS_11050 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00240 Pyrimidine metabolism [PATH:ras00240] D RAS_02590 pyrH; uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D RAS_02000 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D RAS_14060 Maf-like protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D RAS_07400 pyrG; CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2] D RAS_04740 cmk; cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D RAS_01560 dcd; dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D RAS_05930 ribonucleoside-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D RAS_05900 ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D RAS_11790 tmk; thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D RAS_p290 tmk; thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D RAS_07130 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D RAS_08740 thyX; flavin-dependent thymidylate synthase K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:ras00250] D RAS_01250 aatA; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D RAS_13090 glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D RAS_05750 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] C 00260 Glycine, serine and threonine metabolism [PATH:ras00260] D RAS_12580 hypothetical protein K00928 lysC; aspartate kinase [EC:2.7.2.4] D RAS_08500 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D RAS_p120 threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48] D RAS_p130 threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48] D RAS_12690 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D RAS_14510 hemA; 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37] D RAS_05020 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D RAS_13730 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D RAS_03920 CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] C 00270 Cysteine and methionine metabolism [PATH:ras00270] D RAS_13420 metK; S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D RAS_05740 laccase domain protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D RAS_12580 hypothetical protein K00928 lysC; aspartate kinase [EC:2.7.2.4] D RAS_08500 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D RAS_06660 ilvE; putative branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D RAS_01250 aatA; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D RAS_07440 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] C 00280 Valine, leucine and isoleucine degradation [PATH:ras00280] D RAS_06660 ilvE; putative branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D RAS_05020 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D RAS_13730 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D RAS_09580 hypothetical protein K00022 HADH; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D RAS_10680 propionyl-CoA carboxylase subunit alpha K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3] D RAS_10690 propionyl-CoA carboxylase subunit beta K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:ras00290] D RAS_06660 ilvE; putative branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] C 00300 Lysine biosynthesis [PATH:ras00300] D RAS_12580 hypothetical protein K00928 lysC; aspartate kinase [EC:2.7.2.4] D RAS_08500 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D RAS_06650 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D RAS_02490 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D RAS_03090 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117] D RAS_14930 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D RAS_06790 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D RAS_10320 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D RAS_10290 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:ras00310] D RAS_02930 sucB; dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D RAS_05020 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D RAS_13730 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D RAS_09580 hypothetical protein K00022 HADH; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] C 00220 Arginine biosynthesis [PATH:ras00220] D RAS_05750 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D RAS_13090 glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D RAS_01250 aatA; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D RAS_01120 hypothetical protein K00930 argB; acetylglutamate kinase [EC:2.7.2.8] C 00330 Arginine and proline metabolism D RAS_01250 aatA; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] C 00340 Histidine metabolism C 00350 Tyrosine metabolism D RAS_01250 aatA; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] C 00360 Phenylalanine metabolism D RAS_01250 aatA; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] C 00380 Tryptophan metabolism [PATH:ras00380] D RAS_02930 sucB; dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D RAS_05020 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D RAS_13730 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D RAS_09580 hypothetical protein K00022 HADH; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:ras00400] D RAS_01250 aatA; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism C 00430 Taurine and hypotaurine metabolism [PATH:ras00430] D RAS_13090 glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D RAS_00990 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] C 00440 Phosphonate and phosphinate metabolism D RAS_14900 MBL fold metallo-hydrolase K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55] C 00450 Selenocompound metabolism [PATH:ras00450] D RAS_06030 ferredoxin--NADP reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D RAS_06410 trxB; thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D RAS_11780 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:ras00460] D RAS_12290 ATP-dependent protease K05349 bglX; beta-glucosidase [EC:3.2.1.21] D RAS_12690 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:ras00470] D RAS_01190 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D RAS_04000 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D RAS_06960 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D RAS_06790 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] C 00480 Glutathione metabolism [PATH:ras00480] D RAS_02430 pepA; cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D RAS_05650 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D RAS_04200 icd; isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation C 00540 Lipopolysaccharide biosynthesis [PATH:ras00540] D RAS_00080 lpxA; acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D RAS_04070 lpxC; UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D RAS_00100 lpxD; UDP-3-O-acylglucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D RAS_12960 hypothetical protein K09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D RAS_08400 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D RAS_12380 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D RAS_05830 hypothetical protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D RAS_01930 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D RAS_07390 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D RAS_01270 waaA; 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D RAS_12370 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] C 00542 O-Antigen repeat unit biosynthesis C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:ras00541] D RAS_08190 capD; UDP-glucose 4-epimerase K17716 capD; UDP-glucose 4-epimerase [EC:5.1.3.2] D RAS_13450 udg; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D RAS_08200 NAD(P)-dependent oxidoreductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D RAS_05870 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D RAS_11730 hypothetical protein K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D RAS_08180 UDP-N-acetyl glucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] C 00550 Peptidoglycan biosynthesis [PATH:ras00550] D RAS_10010 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D RAS_03990 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D RAS_03980 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D RAS_06960 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D RAS_10320 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D RAS_04000 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D RAS_10290 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D RAS_06690 uppS; isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D RAS_10280 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D RAS_06940 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D RAS_13770 mrcA; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D RAS_09730 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D RAS_09770 penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D RAS_07240 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] C 00552 Teichoic acid biosynthesis C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:ras00730] D RAS_04540 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D RAS_04550 iscS; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D RAS_11050 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:ras00740] D RAS_00640 hypothetical protein K00861 RFK; riboflavin kinase [EC:2.7.1.26] D RAS_09200 ubiX; flavin prenyltransferase UbiX K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00750 Vitamin B6 metabolism C 00760 Nicotinate and nicotinamide metabolism [PATH:ras00760] D RAS_06480 nadK; NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] D RAS_14800 pntAA; NAD(P) transhydrogenase subunit alpha part 1 K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D RAS_14790 pntAB; NAD(P) transhydrogenase subunit alpha part 2 K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D RAS_01480 NAD(P) transhydrogenase subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1] C 00770 Pantothenate and CoA biosynthesis [PATH:ras00770] D RAS_12950 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D RAS_09990 acpS; holo-[acyl-carrier-protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D RAS_06660 ilvE; putative branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] C 00780 Biotin metabolism [PATH:ras00780] D RAS_13230 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D RAS_13210 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D RAS_00090 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D RAS_07730 fabI; enoyl-[acyl-carrier-protein] reductase [NADH] FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D RAS_08310 hypothetical protein K01012 bioB; biotin synthase [EC:2.8.1.6] D RAS_05570 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:ras00785] D RAS_14980 lipB; octanoyltransferase K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181] D RAS_12700 lipA; lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8] D RAS_05020 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D RAS_13730 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D RAS_04140 pdhA; pyruvate dehydrogenase E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D RAS_04150 pdhB; pyruvate dehydrogenase E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D RAS_05380 pdhC; dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D RAS_02940 sucA; 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D RAS_02930 sucB; dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] C 00790 Folate biosynthesis [PATH:ras00790] D RAS_07340 folE; GTP cyclohydrolase 1 K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16] D RAS_00510 hypothetical protein K13941 folKP; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase / dihydropteroate synthase [EC:2.7.6.3 2.5.1.15] D RAS_05600 bifunctional folylpolyglutamate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D RAS_02920 queD; 6-carboxy-5,6,7,8-tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D RAS_10470 queE; 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D RAS_12090 queC; 7-cyano-7-deazaguanine synthase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D RAS_01530 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] C 00670 One carbon pool by folate [PATH:ras00670] D RAS_06040 folD; bifunctional protein FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D RAS_12690 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D RAS_03430 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D RAS_08740 thyX; flavin-dependent thymidylate synthase K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] D RAS_05030 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:ras00860] D RAS_14510 hemA; 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37] D RAS_08290 gltX1; glutamate--tRNA ligase 1 K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D RAS_10760 gltX2; glutamate--tRNA ligase 2 K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D RAS_09170 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D RAS_05110 hemC; porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D RAS_15130 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] D RAS_15090 hemF; oxygen-dependent coproporphyrinogen-III oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3] D RAS_15110 UPF0093 membrane protein K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-] D RAS_15120 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] D RAS_08020 ctaB; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D RAS_04100 ctaA; heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:ras00130] D RAS_11810 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D RAS_14140 hypothetical protein K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98] D RAS_09200 ubiX; flavin prenyltransferase UbiX K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D RAS_10750 ubiG; ubiquinone biosynthesis O-methyltransferase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64] D RAS_09630 2-octaprenyl-6-methoxyphenyl hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-] D RAS_11710 ubiE; ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D RAS_03050 5-demethoxyubiquinone hydroxylase, mitochondrial K06134 COQ7; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:ras00900] D RAS_09200 ubiX; flavin prenyltransferase UbiX K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D RAS_04850 fni; isopentenyl-diphosphate delta-isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2] D RAS_05320 octaprenyl-diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D RAS_06690 uppS; isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation C 00907 Pinene, camphor and geraniol degradation D RAS_09580 hypothetical protein K00022 HADH; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis D RAS_08200 NAD(P)-dependent oxidoreductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides C 01055 Biosynthesis of vancomycin group antibiotics B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids [PATH:ras00946] D RAS_12290 ATP-dependent protease K05349 bglX; beta-glucosidase [EC:3.2.1.21] C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis C 00332 Carbapenem biosynthesis C 00261 Monobactam biosynthesis [PATH:ras00261] D RAS_12580 hypothetical protein K00928 lysC; aspartate kinase [EC:2.7.2.4] D RAS_08500 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D RAS_06650 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D RAS_02490 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:ras00521] D RAS_03890 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D RAS_08200 NAD(P)-dependent oxidoreductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 00524 Neomycin, kanamycin and gentamicin biosynthesis C 00525 Acarbose and validamycin biosynthesis C 00401 Novobiocin biosynthesis D RAS_01250 aatA; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis C 00333 Prodigiosin biosynthesis D RAS_12870 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D RAS_13210 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D RAS_07730 fabI; enoyl-[acyl-carrier-protein] reductase [NADH] FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D RAS_13220 acpP; acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites [PATH:ras00999] D RAS_13420 metK; S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D RAS_12290 ATP-dependent protease K05349 bglX; beta-glucosidase [EC:3.2.1.21] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:ras00362] D RAS_07160 putative dioxygenase K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3] D RAS_03270 fdxB; 2Fe-2S ferredoxin K04755 fdx; ferredoxin, 2Fe-2S C 00627 Aminobenzoate degradation D RAS_09200 ubiX; flavin prenyltransferase UbiX K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00364 Fluorobenzoate degradation C 00625 Chloroalkane and chloroalkene degradation C 00361 Chlorocyclohexane and chlorobenzene degradation C 00623 Toluene degradation C 00622 Xylene degradation C 00633 Nitrotoluene degradation C 00642 Ethylbenzene degradation C 00643 Styrene degradation C 00791 Atrazine degradation C 00930 Caprolactam degradation D RAS_09580 hypothetical protein K00022 HADH; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] C 00363 Bisphenol degradation C 00621 Dioxin degradation C 00626 Naphthalene degradation C 00624 Polycyclic aromatic hydrocarbon degradation D RAS_07160 putative dioxygenase K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3] C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:ras03020] D RAS_00660 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D RAS_00650 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D RAS_11020 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D RAS_10000 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:ras03010] D RAS_04750 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D RAS_01320 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D RAS_11200 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D RAS_08030 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D RAS_11090 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D RAS_02230 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D RAS_00740 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D RAS_11120 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D RAS_03810 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D RAS_11270 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D RAS_11030 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D RAS_00750 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D RAS_11040 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D RAS_11130 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D RAS_05810 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D RAS_15000 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D RAS_11170 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D RAS_02220 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D RAS_11220 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D RAS_11000 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D RAS_10600 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D RAS_00690 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D RAS_11230 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D RAS_11260 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D RAS_11250 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D RAS_11140 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D RAS_11110 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D RAS_00670 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D RAS_02210 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D RAS_00680 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D RAS_00700 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D RAS_03800 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D RAS_11160 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D RAS_11070 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D RAS_11190 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D RAS_11010 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D RAS_11100 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D RAS_00960 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D RAS_10500 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D RAS_12600 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D RAS_11210 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D RAS_11240 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D RAS_11150 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D RAS_10460 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D RAS_12590 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D RAS_01150 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D RAS_11180 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D RAS_11080 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D RAS_01140 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D RAS_13370 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D RAS_15010 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D RAS_10490 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D RAS_r00030 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D RAS_r00010 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D RAS_r00020 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:ras00970] D RAS_t00200 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D RAS_t00110 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D RAS_t00190 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D RAS_t00140 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D RAS_t00320 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D RAS_t00080 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D RAS_t00150 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D RAS_t00180 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D RAS_t00090 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D RAS_t00020 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D RAS_t00220 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D RAS_t00240 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D RAS_t00270 tRNA-His K14226 tRNA-His; tRNA His D RAS_t00160 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D RAS_t00330 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D RAS_t00210 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D RAS_t00260 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D RAS_t00170 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D RAS_t00040 tRNA-Met K14230 tRNA-Met; tRNA Met D RAS_t00070 tRNA-Met K14230 tRNA-Met; tRNA Met D RAS_t00300 tRNA-Met K14230 tRNA-Met; tRNA Met D RAS_t00010 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D RAS_t00310 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D RAS_t00130 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D RAS_t00280 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D RAS_t00120 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D RAS_t00060 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D RAS_t00340 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D RAS_t00050 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D RAS_t00030 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D RAS_t00250 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D RAS_t00100 tRNA-Val K14237 tRNA-Val; tRNA Val D RAS_t00230 tRNA-Val K14237 tRNA-Val; tRNA Val D RAS_08290 gltX1; glutamate--tRNA ligase 1 K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D RAS_10760 gltX2; glutamate--tRNA ligase 2 K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D RAS_02530 gatA; glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D RAS_02520 gatB; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D RAS_02540 gatC; glutamyl-tRNA(Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D RAS_14730 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D RAS_02470 aspS; aspartate--tRNA(Asp/Asn) ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D RAS_14640 glyQ; glycine--tRNA ligase alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D RAS_14630 glyS; glycine--tRNA ligase beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D RAS_03650 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D RAS_13490 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D RAS_01330 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D RAS_11780 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D RAS_03430 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D RAS_11870 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D RAS_06730 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D RAS_10640 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D RAS_07590 lysS; lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6] D RAS_01600 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D RAS_07330 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D RAS_08670 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D RAS_06770 pheS; phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D RAS_06760 pheT; phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D RAS_09460 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D RAS_05140 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:ras03060] D RAS_11060 secY; protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D RAS_00720 secE; protein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D RAS_01410 secG; protein-export membrane protein SecG K03075 secG; preprotein translocase subunit SecG D RAS_10100 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D RAS_00940 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D RAS_10090 UPF0092 membrane protein K03210 yajC; preprotein translocase subunit YajC D RAS_02100 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D RAS_09970 secA; protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D RAS_01550 secB; protein-export protein SecB K03071 secB; preprotein translocase subunit SecB D RAS_02830 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D RAS_13390 ftsY; signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor D RAS_12620 tatA; Sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA D RAS_13480 tatC; Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC D RAS_00920 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D RAS_06980 lspA; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:ras04122] D RAS_04540 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D RAS_04550 iscS; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D RAS_08690 mnmA; tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] C 03050 Proteasome C 03018 RNA degradation [PATH:ras03018] D RAS_03860 rppH; RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D RAS_04090 ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] D RAS_05820 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D RAS_11410 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D RAS_05330 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D RAS_06470 MBL fold hydrolase K12574 rnj; ribonuclease J [EC:3.1.-.-] D RAS_03000 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D RAS_10840 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D RAS_00260 poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:ras03030] D RAS_12940 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D RAS_13440 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D RAS_14820 hypothetical protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D RAS_02820 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D RAS_03040 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D RAS_14920 hypothetical protein K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D RAS_06750 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D RAS_09210 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D RAS_14760 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D RAS_14390 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D RAS_12980 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D RAS_03300 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D RAS_12460 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:ras03410] D RAS_12660 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D RAS_07890 putative 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] D RAS_11720 mutM; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D RAS_14570 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D RAS_11610 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D RAS_04130 hypothetical protein K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D RAS_05360 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D RAS_12460 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:ras03420] D RAS_10330 mfd; transcription-repair-coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D RAS_14380 uvrA; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A D RAS_03310 uvrB; UvrABC system protein B K03702 uvrB; excinuclease ABC subunit B D RAS_09840 uvrC; UvrABC system protein C K03703 uvrC; excinuclease ABC subunit C D RAS_06330 uvrD; putative DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D RAS_12460 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03430 Mismatch repair [PATH:ras03430] D RAS_08800 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D RAS_15020 mutL; DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D RAS_06330 uvrD; putative DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D RAS_11590 xseA; exodeoxyribonuclease 7 large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D RAS_07910 xseB; exodeoxyribonuclease 7 small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D RAS_05360 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D RAS_14390 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D RAS_13440 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D RAS_06750 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D RAS_14820 hypothetical protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D RAS_03040 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D RAS_02820 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D RAS_12940 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D RAS_14920 hypothetical protein K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D RAS_12460 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D RAS_04690 dam; site-specific DNA-methyltransferase (adenine-specific) K06223 dam; DNA adenine methylase [EC:2.1.1.72] D RAS_p400 hypothetical protein K06223 dam; DNA adenine methylase [EC:2.1.1.72] C 03440 Homologous recombination [PATH:ras03440] D RAS_05360 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D RAS_14390 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D RAS_00480 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF D RAS_09350 hypothetical protein K03584 recO; DNA repair protein RecO (recombination protein O) D RAS_06510 recR; recombination protein RecR K06187 recR; recombination protein RecR D RAS_13200 recA; protein RecA K03553 recA; recombination protein RecA D RAS_07290 ruvA; Holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D RAS_07270 ruvB; Holliday junction ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D RAS_00890 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D RAS_10190 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D RAS_13440 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D RAS_06750 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D RAS_14820 hypothetical protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D RAS_03040 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D RAS_02820 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D RAS_12940 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D RAS_14920 hypothetical protein K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D RAS_09190 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:ras02010] D RAS_01220 toluene ABC transporter substrate-binding protein K07323 mlaC; phospholipid transport system substrate-binding protein D RAS_13000 outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D RAS_01180 putative ABC transporter permease protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D RAS_01170 organic solvent ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D RAS_00250 hypothetical protein K09815 znuA; zinc transport system substrate-binding protein D RAS_10740 hypothetical protein K09816 znuB; zinc transport system permease protein D RAS_14350 znuC; zinc import ATP-binding protein ZnuC K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D RAS_08330 bioY; putative biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component D RAS_00040 transport permease protein K09690 wzm; homopolymeric O-antigen transport system permease protein D RAS_00030 ABC transporter ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14] D RAS_12150 multidrug ABC transporter substrate-binding protein K09808 lolC_E; lipoprotein-releasing system permease protein D RAS_12160 lolD; lipoprotein-releasing system ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D RAS_14300 heme exporter protein C K02195 ccmC; heme exporter protein C D RAS_04230 hypothetical protein K02194 ccmB; heme exporter protein B D RAS_13610 ccmA; cytochrome c biogenesis ATP-binding export protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D RAS_14910 hypothetical protein K07091 lptF; lipopolysaccharide export system permease protein D RAS_13340 permease K11720 lptG; lipopolysaccharide export system permease protein D RAS_05860 ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D RAS_07260 multidrug resistance protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D RAS_03330 metal ABC transporter permease K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter D RAS_08510 ABC transporter ATP-binding protein K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase C 02060 Phosphotransferase system (PTS) C 03070 Bacterial secretion system [PATH:ras03070] D RAS_03710 membrane protein K12340 tolC; outer membrane protein D RAS_10100 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D RAS_00940 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D RAS_00720 secE; protein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D RAS_01410 secG; protein-export membrane protein SecG K03075 secG; preprotein translocase subunit SecG D RAS_11060 secY; protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D RAS_10090 UPF0092 membrane protein K03210 yajC; preprotein translocase subunit YajC D RAS_02100 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D RAS_09970 secA; protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D RAS_13390 ftsY; signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor D RAS_01550 secB; protein-export protein SecB K03071 secB; preprotein translocase subunit SecB D RAS_02830 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D RAS_12620 tatA; Sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA D RAS_13480 tatC; Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC D RAS_01100 hypothetical protein K03198 virB3; type IV secretion system protein VirB3 D RAS_08960 hypothetical protein K03204 virB9; type IV secretion system protein VirB9 D RAS_09000 P-type conjugative transfer protein VirB9 K03204 virB9; type IV secretion system protein VirB9 D RAS_01040 putative lipoprotein K03201 virB6; type IV secretion system protein VirB6 D RAS_01050 hypothetical protein K03201 virB6; type IV secretion system protein VirB6 D RAS_01060 hypothetical protein K03201 virB6; type IV secretion system protein VirB6 D RAS_01070 hypothetical protein K03201 virB6; type IV secretion system protein VirB6 D RAS_01080 hypothetical protein K03201 virB6; type IV secretion system protein VirB6 D RAS_08970 hypothetical protein K03203 virB8; type IV secretion system protein VirB8 D RAS_08990 virB8 family protein K03203 virB8; type IV secretion system protein VirB8 D RAS_08950 VirB10 protein K03195 virB10; type IV secretion system protein VirB10 D RAS_01090 transporter K03199 virB4; type IV secretion system protein VirB4 [EC:7.4.2.8] D RAS_13500 transporter K03199 virB4; type IV secretion system protein VirB4 [EC:7.4.2.8] D RAS_08940 type VI secretion protein K03196 virB11; type IV secretion system protein VirB11 [EC:7.4.2.8] D RAS_08930 type IV secretion system protein VirD4 K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8] B B 09132 Signal transduction C 02020 Two-component system [PATH:ras02020] D RAS_06680 two-component sensor histidine kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D RAS_06670 DNA-binding response regulator K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR D RAS_00810 htrA; putative periplasmic serine endoprotease DegP-like protein K04771 degP; serine protease Do [EC:3.4.21.107] D RAS_04100 ctaA; heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9] D RAS_10360 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D RAS_05960 hypothetical protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D RAS_05750 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D RAS_10590 putative sensor histidine kinase NtrY-like protein K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D RAS_09650 putative response regulator NtrX-like protein K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX D RAS_03760 two-component sensor histidine kinase K07716 pleC; two-component system, cell cycle sensor histidine kinase PleC [EC:2.7.13.3] D RAS_03870 pleD; PleD family two-component system response regulator K02488 pleD; two-component system, cell cycle response regulator [EC:2.7.7.65] D RAS_01540 DNA-binding response regulator K13584 ctrA; two-component system, cell cycle response regulator CtrA D RAS_04250 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D RAS_04260 petB; cytochrome b K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D RAS_04280 cytochrome c K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D RAS_04050 cycM; cytochrome c family protein K08738 CYC; cytochrome c D RAS_03580 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D RAS_03590 cytochrome D ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D RAS_03710 membrane protein K12340 tolC; outer membrane protein D RAS_08180 UDP-N-acetyl glucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis D RAS_04250 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:ras02024] D RAS_06810 hypothetical protein K18139 oprM; outer membrane protein, multidrug efflux system D RAS_02100 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D RAS_00720 secE; protein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D RAS_01410 secG; protein-export membrane protein SecG K03075 secG; preprotein translocase subunit SecG D RAS_11060 secY; protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D RAS_10090 UPF0092 membrane protein K03210 yajC; preprotein translocase subunit YajC D RAS_09970 secA; protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D RAS_13390 ftsY; signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor D RAS_01550 secB; protein-export protein SecB K03071 secB; preprotein translocase subunit SecB D RAS_02830 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis C 02040 Flagellar assembly D RAS_14750 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:ras01501] D RAS_05250 ampG1; putative transporter AmpG 1 K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D RAS_07250 MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D RAS_06810 hypothetical protein K18139 oprM; outer membrane protein, multidrug efflux system D RAS_03710 membrane protein K12340 tolC; outer membrane protein D RAS_13770 mrcA; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D RAS_09730 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D RAS_09770 penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:ras01502] D RAS_04000 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D RAS_01190 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D RAS_10290 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D RAS_10280 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D RAS_06940 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:ras01503] D RAS_00810 htrA; putative periplasmic serine endoprotease DegP-like protein K04771 degP; serine protease Do [EC:3.4.21.107] D RAS_03710 membrane protein K12340 tolC; outer membrane protein D RAS_00080 lpxA; acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:ras01000] C 01001 Protein kinases [BR:ras01001] D RAS_06680 two-component sensor histidine kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D RAS_10590 putative sensor histidine kinase NtrY-like protein K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D RAS_03760 two-component sensor histidine kinase K07716 pleC; two-component system, cell cycle sensor histidine kinase PleC [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:ras01009] D RAS_14500 htpG; chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG C 01002 Peptidases and inhibitors [BR:ras01002] D RAS_06980 lspA; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] D RAS_07070 putative glutamine amidotransferase-like protein K07010 K07010; putative glutamine amidotransferase D RAS_02430 pepA; cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D RAS_14930 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D RAS_14220 map; methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D RAS_04610 Xaa-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D RAS_02950 carboxypeptidase M32 K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19] D RAS_02190 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D RAS_02660 putative zinc metalloprotease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D RAS_00810 htrA; putative periplasmic serine endoprotease DegP-like protein K04771 degP; serine protease Do [EC:3.4.21.107] D RAS_09070 oligopeptidase B K01354 ptrB; oligopeptidase B [EC:3.4.21.83] D RAS_07240 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D RAS_04760 clpP; ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D RAS_06260 lon; Lon protease K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D RAS_p490 hypothetical protein K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D RAS_00920 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D RAS_03750 peptidase S41 K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D RAS_07100 putative carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13] D RAS_08470 hslV; ATP-dependent protease subunit HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] D RAS_11380 eco; ecotin K08276 eco; ecotin D RAS_00820 protein HflC K04087 hflC; modulator of FtsH protease HflC D RAS_00830 HflK protein K04088 hflK; modulator of FtsH protease HflK C 01003 Glycosyltransferases [BR:ras01003] D RAS_13770 mrcA; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] C 01005 Lipopolysaccharide biosynthesis proteins [BR:ras01005] D RAS_00080 lpxA; acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D RAS_08400 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D RAS_04070 lpxC; UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D RAS_00100 lpxD; UDP-3-O-acylglucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D RAS_12960 hypothetical protein K09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D RAS_12380 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D RAS_12370 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D RAS_01270 waaA; 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D RAS_01930 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D RAS_07390 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D RAS_05830 hypothetical protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:ras01011] D RAS_10010 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D RAS_03990 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D RAS_03980 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D RAS_06960 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D RAS_10320 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D RAS_04000 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D RAS_01190 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D RAS_07100 putative carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13] D RAS_10280 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D RAS_06940 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D RAS_10140 murJ; putative lipid II flippase MurJ K03980 murJ; putative peptidoglycan lipid II flippase D RAS_13770 mrcA; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D RAS_09730 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D RAS_09770 penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D RAS_07240 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D RAS_07120 lytic transglycosylase K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D RAS_08380 aminodeoxychorismate lyase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D RAS_07230 rlpA; endolytic peptidoglycan transglycosylase RlpA K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D RAS_14990 ampD; anhydro-N-acetylmuramyl-tripeptide amidase K11066 amiD; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] C 01004 Lipid biosynthesis proteins [BR:ras01004] D RAS_12870 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D RAS_13360 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase 3 K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D RAS_13230 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D RAS_13210 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D RAS_00090 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D RAS_07730 fabI; enoyl-[acyl-carrier-protein] reductase [NADH] FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D RAS_02240 acyl-CoA desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1] D RAS_05150 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins C 01006 Prenyltransferases [BR:ras01006] D RAS_05320 octaprenyl-diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D RAS_06690 uppS; isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D RAS_05880 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D RAS_11810 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D RAS_08020 ctaB; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] C 01007 Amino acid related enzymes [BR:ras01007] D RAS_07590 lysS; lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6] D RAS_08290 gltX1; glutamate--tRNA ligase 1 K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D RAS_10760 gltX2; glutamate--tRNA ligase 2 K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D RAS_09460 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D RAS_05140 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D RAS_01330 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D RAS_01600 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D RAS_11780 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D RAS_10640 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D RAS_11870 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D RAS_06730 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D RAS_02470 aspS; aspartate--tRNA(Asp/Asn) ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D RAS_08670 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D RAS_14640 glyQ; glycine--tRNA ligase alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D RAS_14630 glyS; glycine--tRNA ligase beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D RAS_13490 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D RAS_07330 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D RAS_03650 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D RAS_14730 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D RAS_06770 pheS; phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D RAS_06760 pheT; phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D RAS_01250 aatA; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D RAS_14510 hemA; 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37] D RAS_06660 ilvE; putative branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:ras00194] D RAS_13680 atpC; ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D RAS_13690 atpD; ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D RAS_13700 atpG; ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D RAS_13710 atpA; ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D RAS_13720 atpH; ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D RAS_00400 atpF; ATP synthase subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b D RAS_00410 F0F1 ATP synthase subunit B' K02109 ATPF0B; F-type H+-transporting ATPase subunit b D RAS_00420 atpE; ATP synthase subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c D RAS_00430 atpB; ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a D RAS_00440 hypothetical protein K02116 atpI; ATP synthase protein I B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:ras03000] D RAS_09880 6-O-methylguanine DNA methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] D RAS_04530 hypothetical protein K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor D RAS_05570 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D RAS_11650 transcriptional regulator K18831 higA; HTH-type transcriptional regulator / antitoxin HigA D RAS_09670 hypothetical protein K07726 K07726; putative transcriptional regulator D RAS_13560 transcriptional regulator K07726 K07726; putative transcriptional regulator D RAS_09700 hypothetical protein K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB D RAS_03960 BolA family transcriptional regulator K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator D RAS_01960 parB; putative chromosome-partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D RAS_00460 CarD family transcriptional regulator K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription D RAS_00560 UPF0301 protein K07735 algH; putative transcriptional regulator D RAS_14070 dksA; RNA polymerase-binding transcription factor DksA K06204 dksA; RNA polymerase-binding transcription factor D RAS_09800 mraZ; transcriptional regulator MraZ K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:ras03021] D RAS_11020 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D RAS_00660 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D RAS_00650 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D RAS_10000 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D RAS_14750 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D RAS_08720 rpoH; RNA polymerase sigma factor RpoH K03089 rpoH; RNA polymerase sigma-32 factor D RAS_09400 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA D RAS_02670 nusB; N utilization substance protein B K03625 nusB; transcription antitermination protein NusB D RAS_00710 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D RAS_14070 dksA; RNA polymerase-binding transcription factor DksA K06204 dksA; RNA polymerase-binding transcription factor D RAS_14780 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D RAS_05330 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:ras03019] D RAS_04090 ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] D RAS_00910 rnc; ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3] D RAS_06470 MBL fold hydrolase K12574 rnj; ribonuclease J [EC:3.1.-.-] D RAS_11410 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D RAS_05820 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D RAS_05330 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D RAS_03000 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D RAS_10840 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D RAS_00260 poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D RAS_03860 rppH; RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] C 03041 Spliceosome C 03011 Ribosome [BR:ras03011] D RAS_04750 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D RAS_01320 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D RAS_11200 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D RAS_08030 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D RAS_11090 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D RAS_02230 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D RAS_00740 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D RAS_11120 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D RAS_03810 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D RAS_11270 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D RAS_11030 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D RAS_00750 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D RAS_11040 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D RAS_11130 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D RAS_05810 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D RAS_15000 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D RAS_11170 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D RAS_02220 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D RAS_11220 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D RAS_11000 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D RAS_10600 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D RAS_00690 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D RAS_11230 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D RAS_11260 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D RAS_11250 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D RAS_11140 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D RAS_11110 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D RAS_02210 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D RAS_00680 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D RAS_00700 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D RAS_00670 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D RAS_03800 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D RAS_11160 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D RAS_11070 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D RAS_11190 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D RAS_11010 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D RAS_11100 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D RAS_00960 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D RAS_10500 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D RAS_12600 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D RAS_11210 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D RAS_11240 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D RAS_11150 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D RAS_12590 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D RAS_01150 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D RAS_11180 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D RAS_11080 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D RAS_01140 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D RAS_13370 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D RAS_15010 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D RAS_10490 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D RAS_10460 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D RAS_r00020 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D RAS_r00030 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D RAS_r00010 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:ras03009] D RAS_00910 rnc; ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3] D RAS_00900 era; GTPase Era K03595 era; GTPase D RAS_14530 obg; GTPase Obg K03979 obgE; GTPase [EC:3.6.5.-] D RAS_14070 dksA; RNA polymerase-binding transcription factor DksA K06204 dksA; RNA polymerase-binding transcription factor D RAS_09400 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA D RAS_02670 nusB; N utilization substance protein B K03625 nusB; transcription antitermination protein NusB D RAS_00710 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D RAS_11560 rsmA; ribosomal RNA small subunit methyltransferase A K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D RAS_09280 putative methylase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D RAS_02740 rsmE; ribosomal RNA small subunit methyltransferase E K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D RAS_01980 rsmG; ribosomal RNA small subunit methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D RAS_09790 rsmH; ribosomal RNA small subunit methyltransferase H K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D RAS_12640 rsmI; ribosomal RNA small subunit methyltransferase I K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D RAS_09440 TlyA family rRNA (cytidine-2'-O)-methyltransferase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D RAS_11290 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D RAS_02680 rlmE; ribosomal RNA large subunit methyltransferase E K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] D RAS_09260 putative RNA pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D RAS_04110 rluC; ribosomal large subunit pseudouridine synthase C K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D RAS_14580 pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D RAS_07930 rimM; ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM D RAS_04090 ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] D RAS_08220 putative pre-16S rRNA nuclease K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D RAS_11410 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D RAS_11630 der; GTPase Der K03977 engA; GTPase D RAS_14620 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D RAS_06540 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A D RAS_09410 hypothetical protein K09748 rimP; ribosome maturation factor RimP D RAS_13890 rsfS; ribosomal silencing factor RsfS K09710 ybeB; ribosome-associated protein D RAS_12710 ybeY; endoribonuclease YbeY K07042 ybeY; probable rRNA maturation factor D RAS_10420 ychF; ribosome-binding ATPase YchF K06942 ychF; ribosome-binding ATPase C 03016 Transfer RNA biogenesis [BR:ras03016] D RAS_08290 gltX1; glutamate--tRNA ligase 1 K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D RAS_10760 gltX2; glutamate--tRNA ligase 2 K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D RAS_07330 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D RAS_10640 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D RAS_06730 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D RAS_11780 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D RAS_01600 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D RAS_02470 aspS; aspartate--tRNA(Asp/Asn) ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D RAS_14730 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D RAS_03650 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D RAS_13490 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D RAS_01330 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D RAS_11870 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D RAS_08670 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D RAS_06770 pheS; phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D RAS_06760 pheT; phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D RAS_09460 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D RAS_05140 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D RAS_08480 hypothetical protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D RAS_08490 hypothetical protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D RAS_14740 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D RAS_05800 hypothetical protein K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D RAS_04540 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D RAS_04550 iscS; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D RAS_14620 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D RAS_05880 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D RAS_13100 mnmE; tRNA modification GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D RAS_01990 mnmG; tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D RAS_08810 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D RAS_10510 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D RAS_10900 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56] D RAS_05040 ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5] D RAS_06720 3'-5' exonuclease K03684 rnd; ribonuclease D [EC:3.1.13.5] D RAS_01950 energy-dependent translational throttle protein EttA K06020 ettA; energy-dependent translational throttle protein EttA D RAS_07590 lysS; lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6] D RAS_14640 glyQ; glycine--tRNA ligase alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D RAS_14630 glyS; glycine--tRNA ligase beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D RAS_14310 tadA; tRNA-specific adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D RAS_00210 dus; putative tRNA-dihydrouridine synthase K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D RAS_13780 miaB; tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D RAS_06780 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5] D RAS_00880 trmJ; tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-] D RAS_00970 trmD; tRNA (guanine-N(1)-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D RAS_08690 mnmA; tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D RAS_04570 hypothetical protein K13628 iscA; iron-sulfur cluster assembly protein D RAS_05060 aminomethyltransferase K06980 ygfZ; tRNA-modifying protein YgfZ D RAS_03510 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D RAS_12090 queC; 7-cyano-7-deazaguanine synthase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D RAS_02920 queD; 6-carboxy-5,6,7,8-tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D RAS_10470 queE; 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D RAS_01530 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D RAS_14670 hypothetical protein K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6] D RAS_12490 tgt; queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D RAS_02200 tilS; tRNA(Ile)-lysidine synthase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D RAS_09370 hypothetical protein K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D RAS_02250 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D RAS_00240 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D RAS_05820 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:ras03012] D RAS_09390 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D RAS_05390 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D RAS_01310 tsf; elongation factor Ts K02357 tsf; elongation factor Ts D RAS_11280 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D RAS_00730 fusA; elongation factor G K02355 fusA; elongation factor G D RAS_05370 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D RAS_02580 frr; ribosome-recycling factor K02838 frr; ribosome recycling factor D RAS_14610 prmC_trmB; bifunctional methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D RAS_10450 pth; peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D RAS_14050 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D RAS_03880 efp; elongation factor P K02356 efp; elongation factor P D RAS_04340 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2 C 03110 Chaperones and folding catalysts [BR:ras03110] D RAS_02290 clpB; chaperone protein ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D RAS_12070 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D RAS_08460 hslU; ATP-dependent protease ATPase subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU D RAS_14500 htpG; chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG D RAS_03000 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D RAS_03280 hscA; chaperone protein HscA K04044 hscA; molecular chaperone HscA D RAS_10840 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D RAS_02990 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D RAS_03290 hscB; co-chaperone protein HscB K04082 hscB; molecular chaperone HscB D RAS_10910 grpE; protein GrpE K03687 GRPE; molecular chaperone GrpE D RAS_p030 hypothetical protein K13993 HSP20; HSP20 family protein D RAS_10850 groS; 10 kDa chaperonin K04078 groES; chaperonin GroES D RAS_00810 htrA; putative periplasmic serine endoprotease DegP-like protein K04771 degP; serine protease Do [EC:3.4.21.107] D RAS_02190 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D RAS_00430 atpB; ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a D RAS_01550 secB; protein-export protein SecB K03071 secB; preprotein translocase subunit SecB D RAS_09850 hypothetical protein K09796 pccA; periplasmic copper chaperone A D RAS_00020 trxA; thioredoxin K03671 TXN; thioredoxin D RAS_p740 hypothetical protein K03671 TXN; thioredoxin D RAS_03320 grxC1; glutaredoxin-1 K03676 grxC; glutaredoxin 3 D RAS_12670 grxC2; putative monothiol glutaredoxin-2 K07390 grxD; monothiol glutaredoxin C 04131 Membrane trafficking [BR:ras04131] D RAS_02000 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D RAS_14500 htpG; chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG C 04121 Ubiquitin system C 03051 Proteasome [BR:ras03051] D RAS_14500 htpG; chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG C 03032 DNA replication proteins [BR:ras03032] D RAS_12980 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D RAS_02810 hup; DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta D RAS_12310 histone-like DNA-binding protein K04764 ihfA; integration host factor subunit alpha D RAS_10360 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D RAS_09210 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D RAS_14760 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D RAS_14390 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D RAS_13440 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D RAS_06750 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D RAS_14920 hypothetical protein K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D RAS_03040 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D RAS_02820 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D RAS_12940 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D RAS_14820 hypothetical protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D RAS_03300 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D RAS_12460 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D RAS_04690 dam; site-specific DNA-methyltransferase (adenine-specific) K06223 dam; DNA adenine methylase [EC:2.1.1.72] D RAS_p400 hypothetical protein K06223 dam; DNA adenine methylase [EC:2.1.1.72] D RAS_03390 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D RAS_10020 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D RAS_01580 parC; DNA topoisomerase 4 subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D RAS_03740 parE; DNA topoisomerase 4 subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D RAS_08270 topA; DNA topoisomerase 1 K03168 topA; DNA topoisomerase I [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:ras03036] D RAS_00910 rnc; ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3] D RAS_02810 hup; DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta D RAS_12310 histone-like DNA-binding protein K04764 ihfA; integration host factor subunit alpha D RAS_10360 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D RAS_13740 DNA starvation/stationary phase protection protein K04047 dps; starvation-inducible DNA-binding protein D RAS_04020 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA D RAS_09770 penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D RAS_14190 ftsK; DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D RAS_09780 hypothetical protein K03586 ftsL; cell division protein FtsL D RAS_04010 ftsQ; cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ D RAS_06950 cell division protein FtsW K03588 ftsW; cell division protein FtsW D RAS_11340 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D RAS_03470 cell division protein ZapE K06916 zapE; cell division protein ZapE D RAS_13330 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D RAS_13320 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC D RAS_09080 hypothetical protein K05837 rodA; rod shape determining protein RodA D RAS_01970 chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein D RAS_02450 ATPase K03496 parA; chromosome partitioning protein D RAS_p370 cobyrinic acid a,c-diamide synthase K03496 parA; chromosome partitioning protein D RAS_01960 parB; putative chromosome-partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D RAS_01580 parC; DNA topoisomerase 4 subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D RAS_03740 parE; DNA topoisomerase 4 subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D RAS_01990 mnmG; tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D RAS_01980 rsmG; ribosomal RNA small subunit methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D RAS_14080 xerC; tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC D RAS_07760 xerD; tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD D RAS_00840 mrp; iron-sulfur cluster carrier protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D RAS_07310 hypothetical protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D RAS_01130 engB; putative GTP-binding protein EngB K03978 engB; GTP-binding protein C 03400 DNA repair and recombination proteins [BR:ras03400] D RAS_09900 hypothetical protein K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D RAS_07890 putative 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] D RAS_12660 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D RAS_07360 ADP-ribose pyrophosphatase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D RAS_07130 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D RAS_09880 6-O-methylguanine DNA methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] D RAS_14570 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D RAS_11720 mutM; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D RAS_11610 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D RAS_04130 hypothetical protein K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D RAS_05360 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D RAS_12460 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D RAS_14380 uvrA; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A D RAS_03310 uvrB; UvrABC system protein B K03702 uvrB; excinuclease ABC subunit B D RAS_09840 uvrC; UvrABC system protein C K03703 uvrC; excinuclease ABC subunit C D RAS_06330 uvrD; putative DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D RAS_00660 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D RAS_00650 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D RAS_11020 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D RAS_10000 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D RAS_10330 mfd; transcription-repair-coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D RAS_08800 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D RAS_15020 mutL; DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D RAS_11590 xseA; exodeoxyribonuclease 7 large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D RAS_07910 xseB; exodeoxyribonuclease 7 small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D RAS_13440 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D RAS_06750 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D RAS_14920 hypothetical protein K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D RAS_03040 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D RAS_02820 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D RAS_12940 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D RAS_14820 hypothetical protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D RAS_14390 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D RAS_04690 dam; site-specific DNA-methyltransferase (adenine-specific) K06223 dam; DNA adenine methylase [EC:2.1.1.72] D RAS_p400 hypothetical protein K06223 dam; DNA adenine methylase [EC:2.1.1.72] D RAS_13200 recA; protein RecA K03553 recA; recombination protein RecA D RAS_07290 ruvA; Holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D RAS_07270 ruvB; Holliday junction ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D RAS_00890 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D RAS_09190 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D RAS_09330 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms D RAS_00480 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF D RAS_10190 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D RAS_09350 hypothetical protein K03584 recO; DNA repair protein RecO (recombination protein O) D RAS_06510 recR; recombination protein RecR K06187 recR; recombination protein RecR D RAS_02960 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D RAS_12920 DNA helicase K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-] D RAS_07090 hypothetical protein K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-] D RAS_03390 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D RAS_10020 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D RAS_08270 topA; DNA topoisomerase 1 K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D RAS_02810 hup; DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta D RAS_12310 histone-like DNA-binding protein K04764 ihfA; integration host factor subunit alpha D RAS_05930 ribonucleoside-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D RAS_05900 ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] C 03029 Mitochondrial biogenesis [BR:ras03029] D RAS_04260 petB; cytochrome b K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D RAS_09390 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D RAS_05390 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D RAS_01310 tsf; elongation factor Ts K02357 tsf; elongation factor Ts D RAS_11280 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D RAS_00730 fusA; elongation factor G K02355 fusA; elongation factor G D RAS_00900 era; GTPase Era K03595 era; GTPase D RAS_09460 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D RAS_06730 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D RAS_02470 aspS; aspartate--tRNA(Asp/Asn) ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D RAS_01600 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D RAS_02530 gatA; glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D RAS_02520 gatB; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D RAS_02540 gatC; glutamyl-tRNA(Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D RAS_14390 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D RAS_02650 bamA; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family D RAS_03000 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D RAS_10910 grpE; protein GrpE K03687 GRPE; molecular chaperone GrpE D RAS_10840 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D RAS_10850 groS; 10 kDa chaperonin K04078 groES; chaperonin GroES D RAS_02990 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D RAS_04540 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D RAS_04550 iscS; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D RAS_04560 iscU; iron-sulfur cluster assembly scaffold protein IscU K22068 ISCU; iron-sulfur cluster assembly enzyme ISCU, mitochondrial D RAS_03290 hscB; co-chaperone protein HscB K04082 hscB; molecular chaperone HscB D RAS_12670 grxC2; putative monothiol glutaredoxin-2 K07390 grxD; monothiol glutaredoxin D RAS_00840 mrp; iron-sulfur cluster carrier protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D RAS_08020 ctaB; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D RAS_08710 ctaG; cytochrome c oxidase assembly protein CtaG K02258 COX11; cytochrome c oxidase assembly protein subunit 11 D RAS_04100 ctaA; heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9] D RAS_02100 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D RAS_12930 SURF1-like protein K14998 SURF1; surfeit locus 1 family protein D RAS_10110 SCO2-like protein K07152 SCO1; protein SCO1 D RAS_00550 hypothetical protein K07152 SCO1; protein SCO1 D RAS_14500 htpG; chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:ras02000] D RAS_07260 multidrug resistance protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D RAS_03330 metal ABC transporter permease K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter D RAS_03560 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D RAS_12120 putative export ATP-binding/permease protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D RAS_p110 abcT3; ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D RAS_03660 hypothetical protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D RAS_08510 ABC transporter ATP-binding protein K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase D RAS_13240 ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein D RAS_13000 outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D RAS_01180 putative ABC transporter permease protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D RAS_01170 organic solvent ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D RAS_01220 toluene ABC transporter substrate-binding protein K07323 mlaC; phospholipid transport system substrate-binding protein D RAS_07680 hypothetical protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein D RAS_07670 hypothetical protein K05832 K05832; putative tryptophan/tyrosine transport system permease protein D RAS_02510 amino acid ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D RAS_11600 hypothetical protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D RAS_00760 glnP; putative glutamine transport system permease protein GlnP K02029 ABC.PA.P; polar amino acid transport system permease protein D RAS_14890 ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D RAS_00250 hypothetical protein K09815 znuA; zinc transport system substrate-binding protein D RAS_10740 hypothetical protein K09816 znuB; zinc transport system permease protein D RAS_14350 znuC; zinc import ATP-binding protein ZnuC K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D RAS_08330 bioY; putative biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component D RAS_00040 transport permease protein K09690 wzm; homopolymeric O-antigen transport system permease protein D RAS_00030 ABC transporter ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14] D RAS_14910 hypothetical protein K07091 lptF; lipopolysaccharide export system permease protein D RAS_13340 permease K11720 lptG; lipopolysaccharide export system permease protein D RAS_05860 ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D RAS_12150 multidrug ABC transporter substrate-binding protein K09808 lolC_E; lipoprotein-releasing system permease protein D RAS_12160 lolD; lipoprotein-releasing system ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D RAS_14300 heme exporter protein C K02195 ccmC; heme exporter protein C D RAS_04230 hypothetical protein K02194 ccmB; heme exporter protein B D RAS_13610 ccmA; cytochrome c biogenesis ATP-binding export protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D RAS_15080 MFS transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter D RAS_07500 MFS transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter D RAS_02010 MFS transporter K02445 glpT; MFS transporter, OPA family, glycerol-3-phosphate transporter D RAS_05250 ampG1; putative transporter AmpG 1 K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D RAS_07250 MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D RAS_12140 MFS transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D RAS_02610 MFS transporter K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein D RAS_05650 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D RAS_02110 mechanosensitive ion channel protein K16053 ybdG; miniconductance mechanosensitive channel D RAS_10040 magnesium transporter MgtE K06213 mgtE; magnesium transporter D RAS_08590 Tol-Pal system subunit TolQ K03562 tolQ; biopolymer transport protein TolQ D RAS_08580 protein TolR K03560 tolR; biopolymer transport protein TolR D RAS_10550 corA; magnesium transport protein CorA K03284 corA; magnesium transporter D RAS_12210 hemolysin K03699 tlyC; magnesium and cobalt exporter, CNNM family D RAS_03710 membrane protein K12340 tolC; outer membrane protein D RAS_06810 hypothetical protein K18139 oprM; outer membrane protein, multidrug efflux system D RAS_02650 bamA; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family D RAS_02970 bamD; outer membrane protein assembly factor BamD K05807 bamD; outer membrane protein assembly factor BamD D RAS_05850 hypothetical protein K09774 lptA; lipopolysaccharide export system protein LptA D RAS_05840 hypothetical protein K11719 lptC; lipopolysaccharide export system protein LptC D RAS_11580 lptD; LPS-assembly protein LptD K04744 lptD; LPS-assembly protein D RAS_12720 tlyC; hemolysin C K06189 corC; hemolysin (HlyC) family protein D RAS_14320 p34; protein p34 K13283 fieF; ferrous-iron efflux pump FieF D RAS_01450 sam; S-adenosylmethionine uptake transporter K15270 sam; S-adenosylmethionine uptake transporter D RAS_13880 potassium transporter K03455 KEA1_2_3; K+:H+ antiporter D RAS_04220 cation:proton antiporter K05566 mnhB; multicomponent Na+:H+ antiporter subunit B D RAS_09010 monovalent cation/H+ antiporter subunit C K05567 mnhC; multicomponent Na+:H+ antiporter subunit C D RAS_09020 cation:proton antiporter K05568 mnhD; multicomponent Na+:H+ antiporter subunit D D RAS_09030 cation:proton antiporter K05568 mnhD; multicomponent Na+:H+ antiporter subunit D D RAS_09060 cation:proton antiporter K05568 mnhD; multicomponent Na+:H+ antiporter subunit D D RAS_02600 cation:proton antiporter K05569 mnhE; multicomponent Na+:H+ antiporter subunit E D RAS_04210 hypothetical protein K05571 mnhG; multicomponent Na+:H+ antiporter subunit G D RAS_10140 murJ; putative lipid II flippase MurJ K03980 murJ; putative peptidoglycan lipid II flippase D RAS_07580 permease K13936 mdcF; malonate transporter and related proteins D RAS_06430 permease K24180 mleP; malate permease and related proteins D RAS_01400 hypothetical protein K09125 yhhQ; queuosine precursor transporter D RAS_06950 cell division protein FtsW K03588 ftsW; cell division protein FtsW D RAS_07200 hypothetical protein K07243 FTR; high-affinity iron transporter D RAS_p940 hypothetical protein K15383 K15383; MtN3 and saliva related transmembrane protein D RAS_13350 peptidoglycan-associated lipoprotein K03640 pal; peptidoglycan-associated lipoprotein D RAS_08730 tolB; protein TolB K03641 tolB; TolB protein D RAS_03930 hemolysin D K03543 emrA; membrane fusion protein, multidrug efflux system D RAS_08520 HlyD family type I secretion periplasmic adaptor subunit K12537 hasE; membrane fusion protein, type I secretion system D RAS_12650 hypothetical protein K16348 ecnB; entericidin B C 02044 Secretion system [BR:ras02044] D RAS_03710 membrane protein K12340 tolC; outer membrane protein D RAS_08510 ABC transporter ATP-binding protein K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase D RAS_08520 HlyD family type I secretion periplasmic adaptor subunit K12537 hasE; membrane fusion protein, type I secretion system D RAS_01100 hypothetical protein K03198 virB3; type IV secretion system protein VirB3 D RAS_01090 transporter K03199 virB4; type IV secretion system protein VirB4 [EC:7.4.2.8] D RAS_13500 transporter K03199 virB4; type IV secretion system protein VirB4 [EC:7.4.2.8] D RAS_01040 putative lipoprotein K03201 virB6; type IV secretion system protein VirB6 D RAS_01050 hypothetical protein K03201 virB6; type IV secretion system protein VirB6 D RAS_01060 hypothetical protein K03201 virB6; type IV secretion system protein VirB6 D RAS_01070 hypothetical protein K03201 virB6; type IV secretion system protein VirB6 D RAS_01080 hypothetical protein K03201 virB6; type IV secretion system protein VirB6 D RAS_08970 hypothetical protein K03203 virB8; type IV secretion system protein VirB8 D RAS_08990 virB8 family protein K03203 virB8; type IV secretion system protein VirB8 D RAS_08960 hypothetical protein K03204 virB9; type IV secretion system protein VirB9 D RAS_09000 P-type conjugative transfer protein VirB9 K03204 virB9; type IV secretion system protein VirB9 D RAS_08950 VirB10 protein K03195 virB10; type IV secretion system protein VirB10 D RAS_08940 type VI secretion protein K03196 virB11; type IV secretion system protein VirB11 [EC:7.4.2.8] D RAS_08930 type IV secretion system protein VirD4 K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8] D RAS_p780 hypothetical protein K12056 traG; conjugal transfer mating pair stabilization protein TraG D RAS_p690 hypothetical protein K12059 trbC; conjugal transfer pilus assembly protein TrbC D RAS_p680 hypothetical protein K12060 traU; conjugal transfer pilus assembly protein TraU D RAS_p660 conjugal transfer pilus assembly protein TraW K12061 traW; conjugal transfer pilus assembly protein TraW D RAS_p630 hypothetical protein K12063 traC; conjugal transfer ATP-binding protein TraC D RAS_p600 hypothetical protein K12065 traB; conjugal transfer pilus assembly protein TraB D RAS_p750 hypothetical protein K12072 traH; conjugative transfer pilus assembly protein TraH D RAS_05960 hypothetical protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D RAS_09970 secA; protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D RAS_01550 secB; protein-export protein SecB K03071 secB; preprotein translocase subunit SecB D RAS_10100 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D RAS_00720 secE; protein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D RAS_00940 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D RAS_01410 secG; protein-export membrane protein SecG K03075 secG; preprotein translocase subunit SecG D RAS_11060 secY; protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D RAS_02830 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D RAS_13390 ftsY; signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor D RAS_10090 UPF0092 membrane protein K03210 yajC; preprotein translocase subunit YajC D RAS_02100 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D RAS_12620 tatA; Sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA D RAS_13480 tatC; Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC C 02042 Bacterial toxins [BR:ras02042] D RAS_12210 hemolysin K03699 tlyC; magnesium and cobalt exporter, CNNM family C 02022 Two-component system [BR:ras02022] D RAS_06680 two-component sensor histidine kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D RAS_06670 DNA-binding response regulator K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR D RAS_10590 putative sensor histidine kinase NtrY-like protein K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D RAS_09650 putative response regulator NtrX-like protein K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX D RAS_03760 two-component sensor histidine kinase K07716 pleC; two-component system, cell cycle sensor histidine kinase PleC [EC:2.7.13.3] D RAS_03870 pleD; PleD family two-component system response regulator K02488 pleD; two-component system, cell cycle response regulator [EC:2.7.7.65] D RAS_01540 DNA-binding response regulator K13584 ctrA; two-component system, cell cycle response regulator CtrA C 02035 Bacterial motility proteins [BR:ras02035] D RAS_05960 hypothetical protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:ras04812] D RAS_13330 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D RAS_11340 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D RAS_04020 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA D RAS_01970 chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein D RAS_02450 ATPase K03496 parA; chromosome partitioning protein D RAS_p370 cobyrinic acid a,c-diamide synthase K03496 parA; chromosome partitioning protein D RAS_01960 parB; putative chromosome-partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:ras04147] D RAS_14500 htpG; chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG D RAS_08250 peroxidase K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24] D RAS_10840 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D RAS_03000 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D RAS_11280 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D RAS_08480 hypothetical protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D RAS_08490 hypothetical protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D RAS_11050 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D RAS_05750 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D RAS_09170 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D RAS_05020 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D RAS_13730 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 02048 Prokaryotic defense system [BR:ras02048] D RAS_04690 dam; site-specific DNA-methyltransferase (adenine-specific) K06223 dam; DNA adenine methylase [EC:2.1.1.72] D RAS_p400 hypothetical protein K06223 dam; DNA adenine methylase [EC:2.1.1.72] D RAS_02270 hypothetical protein K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D RAS_07040 mazF; mRNA-degrading endonuclease K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D RAS_00060 mRNA interferase PemK K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D RAS_07030 multidrug transporter MatE K07172 mazE; antitoxin MazE D RAS_09700 hypothetical protein K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB D RAS_14880 hypothetical protein K18923 stbD; antitoxin StbD D RAS_05170 addiction module toxin, RelE/StbE family K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-] D RAS_05090 hypothetical protein K07473 dinJ; DNA-damage-inducible protein J D RAS_05180 hypothetical protein K07473 dinJ; DNA-damage-inducible protein J D RAS_12470 toxin YoeB K19158 yoeB; toxin YoeB [EC:3.1.-.-] D RAS_12480 hypothetical protein K19159 yefM; antitoxin YefM D RAS_03600 hypothetical protein K19159 yefM; antitoxin YefM D RAS_14660 hypothetical protein K19165 phd; antitoxin Phd D RAS_11640 toxin RelE K19166 higB; mRNA interferase HigB [EC:3.1.-.-] D RAS_11650 transcriptional regulator K18831 higA; HTH-type transcriptional regulator / antitoxin HigA D RAS_12900 hypothetical protein K21498 higA-1; antitoxin HigA-1 D RAS_08210 hypothetical protein K21498 higA-1; antitoxin HigA-1 D RAS_14650 vapC; ribonuclease VapC K07062 fitB; toxin FitB [EC:3.1.-.-] D RAS_11340 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D RAS_13330 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D RAS_01580 parC; DNA topoisomerase 4 subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D RAS_03740 parE; DNA topoisomerase 4 subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D RAS_08290 gltX1; glutamate--tRNA ligase 1 K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D RAS_10760 gltX2; glutamate--tRNA ligase 2 K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D RAS_10340 hypothetical protein K09159 cptB; antitoxin CptB D RAS_04540 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D RAS_04550 iscS; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors [BR:ras04054] C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules C 01504 Antimicrobial resistance genes [BR:ras01504] D RAS_04790 hypothetical protein K04343 strB; streptomycin 6-kinase [EC:2.7.1.72] D RAS_07050 hypothetical protein K18234 vat; virginiamycin A acetyltransferase [EC:2.3.1.-] D RAS_06810 hypothetical protein K18139 oprM; outer membrane protein, multidrug efflux system D RAS_03710 membrane protein K12340 tolC; outer membrane protein C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:ras03100] D RAS_t00200 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D RAS_t00110 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D RAS_t00190 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D RAS_t00140 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D RAS_t00320 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D RAS_t00080 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D RAS_t00150 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D RAS_t00180 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D RAS_t00090 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D RAS_t00020 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D RAS_t00220 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D RAS_t00240 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D RAS_t00270 tRNA-His K14226 tRNA-His; tRNA His D RAS_t00160 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D RAS_t00330 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D RAS_t00210 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D RAS_t00260 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D RAS_t00170 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D RAS_t00040 tRNA-Met K14230 tRNA-Met; tRNA Met D RAS_t00070 tRNA-Met K14230 tRNA-Met; tRNA Met D RAS_t00300 tRNA-Met K14230 tRNA-Met; tRNA Met D RAS_t00010 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D RAS_t00310 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D RAS_t00130 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D RAS_t00280 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D RAS_t00120 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D RAS_t00060 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D RAS_t00340 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D RAS_t00050 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D RAS_t00030 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D RAS_t00250 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D RAS_t00100 tRNA-Val K14237 tRNA-Val; tRNA Val D RAS_t00230 tRNA-Val K14237 tRNA-Val; tRNA Val D RAS_r00030 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D RAS_r00010 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D RAS_r00020 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D RAS_tm00290 transfer messenger RNA K15035 ssrA; transfer-messenger RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D RAS_00490 PqqC-like protein K06137 pqqC; pyrroloquinoline-quinone synthase [EC:1.3.3.11] D RAS_12360 ygaF; putative peroxiredoxin YgaF K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D RAS_07720 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D RAS_02120 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D RAS_00010 putative pyruvate, phosphate dikinase regulatory protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33] D RAS_11770 DNA-binding protein K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D RAS_02030 def1; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D RAS_03420 def2; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D RAS_05730 def3; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] C 99981 Carbohydrate metabolism C 99982 Energy metabolism D RAS_14290 fdxA; ferredoxin K05524 fdxA; ferredoxin C 99983 Lipid metabolism C 99984 Nucleotide metabolism C 99985 Amino acid metabolism C 99986 Glycan metabolism C 99987 Cofactor metabolism D RAS_11700 putative protein kinase UbiB K03688 ubiB; ubiquinone biosynthesis protein D RAS_10610 ubiquinone biosynthesis protein K18587 COQ9; ubiquinone biosynthesis protein COQ9 D RAS_02720 ratA; ribosome association toxin RatA K18588 COQ10; coenzyme Q-binding protein COQ10 C 99988 Secondary metabolism C 99999 Others D RAS_12680 putative hydrolase K06999 K06999; phospholipase/carboxylesterase B B 09192 Unclassified: genetic information processing C 99973 Transcription D RAS_11420 cspA; cold shock-like protein CspA K03704 cspA; cold shock protein C 99974 Translation C 99975 Protein processing D RAS_14520 tig; trigger factor K03545 tig; trigger factor D RAS_06640 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein D RAS_08440 hypothetical protein K07391 comM; magnesium chelatase family protein C 99976 Replication and repair D RAS_11920 rmuC; DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC D RAS_13640 hypothetical protein K07461 K07461; putative endonuclease D RAS_08280 hypothetical protein K07461 K07461; putative endonuclease D RAS_04270 endonuclease K07461 K07461; putative endonuclease D RAS_08260 hypothetical protein K04096 smf; DNA processing protein D RAS_01810 tnpR; transposase K14060 pinR; putative DNA-invertase from lambdoid prophage Rac D RAS_12530 hypothetical protein K07493 K07493; putative transposase D RAS_12540 hypothetical protein K07493 K07493; putative transposase D RAS_04620 hypothetical protein K07493 K07493; putative transposase D RAS_04630 hypothetical protein K07493 K07493; putative transposase D RAS_04860 hypothetical protein K07493 K07493; putative transposase D RAS_04870 hypothetical protein K07493 K07493; putative transposase D RAS_06110 hypothetical protein K07493 K07493; putative transposase D RAS_06120 hypothetical protein K07493 K07493; putative transposase D RAS_06860 hypothetical protein K07493 K07493; putative transposase D RAS_06870 hypothetical protein K07493 K07493; putative transposase D RAS_07530 hypothetical protein K07493 K07493; putative transposase D RAS_07540 hypothetical protein K07493 K07493; putative transposase D RAS_00370 hypothetical protein K07493 K07493; putative transposase D RAS_00380 hypothetical protein K07493 K07493; putative transposase D RAS_00620 hypothetical protein K07493 K07493; putative transposase D RAS_00630 hypothetical protein K07493 K07493; putative transposase D RAS_01620 hypothetical protein K07493 K07493; putative transposase D RAS_01630 hypothetical protein K07493 K07493; putative transposase D RAS_02330 hypothetical protein K07493 K07493; putative transposase D RAS_02340 hypothetical protein K07493 K07493; putative transposase D RAS_02380 hypothetical protein K07493 K07493; putative transposase D RAS_02390 hypothetical protein K07493 K07493; putative transposase D RAS_p160 hypothetical protein K07498 K07498; putative transposase C 99979 Viral proteins C 99998 Others D RAS_14840 nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D RAS_08680 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D RAS_04600 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D RAS_02020 tlcA; ADP,ATP carrier protein 1 K03301 TC.AAA; ATP:ADP antiporter, AAA family D RAS_12740 tlcE; ADP,ATP carrier protein 5 K03301 TC.AAA; ATP:ADP antiporter, AAA family D RAS_05790 tlcD; ADP,ATP carrier protein 4 K03301 TC.AAA; ATP:ADP antiporter, AAA family C 99978 Cell growth D RAS_07210 putative intracellular septation protein A K06190 ispZ; intracellular septation protein C 99993 Cell motility D RAS_10730 hypothetical protein K07343 tfoX; DNA transformation protein and related proteins C 99995 Signaling proteins D RAS_p230 hypothetical protein K03607 proQ; ProP effector D RAS_04160 GTP-binding protein K06207 typA; GTP-binding protein C 99992 Structural proteins D RAS_01230 hypothetical protein K04754 mlaA; phospholipid-binding lipoprotein MlaA D RAS_01460 putative outer membrane protein K07275 ompW; outer membrane protein D RAS_10120 ccmE; cytochrome c-type biogenesis protein CcmE K02197 ccmE; cytochrome c-type biogenesis protein CcmE C 99994 Others D RAS_02910 divalent cation tolerance protein CutA K03926 cutA; periplasmic divalent cation tolerance protein D RAS_08370 cyaY; protein CyaY K06202 cyaY; iron-sulfur cluster assembly protein CyaY B B 09194 Poorly characterized C 99996 General function prediction only D RAS_02980 chaB; cation transport regulator K06197 chaB; cation transport regulator D RAS_05580 esterase K07001 K07001; NTE family protein D RAS_05760 hypothetical protein K07058 K07058; membrane protein D RAS_00800 UPF0176 protein K07146 K07146; UPF0176 protein C 99997 Function unknown D RAS_03730 hypothetical protein K06867 K06867; uncharacterized protein D RAS_03530 hypothetical protein K06867 K06867; uncharacterized protein D RAS_12910 hypothetical protein K06867 K06867; uncharacterized protein D RAS_06090 hypothetical protein K06867 K06867; uncharacterized protein D RAS_14180 hypothetical protein K06867 K06867; uncharacterized protein D RAS_07600 hypothetical protein K06867 K06867; uncharacterized protein D RAS_10670 hypothetical protein K06867 K06867; uncharacterized protein D RAS_08100 alpha/beta hydrolase K06889 K06889; uncharacterized protein D RAS_02480 hypothetical protein K06890 K06890; uncharacterized protein D RAS_05190 hypothetical protein K07018 K07018; uncharacterized protein D RAS_03250 C4-dicarboxylate ABC transporter substrate-binding protein K07080 K07080; uncharacterized protein D RAS_09450 ATPase K07133 K07133; uncharacterized protein D RAS_03850 hypothetical protein K07133 K07133; uncharacterized protein D RAS_11900 hypothetical protein K07133 K07133; uncharacterized protein D RAS_13270 hypothetical protein K07133 K07133; uncharacterized protein D RAS_13800 ATPase K07133 K07133; uncharacterized protein D RAS_05120 ATPase K07133 K07133; uncharacterized protein D RAS_14490 UPF0235 protein K09131 K09131; uncharacterized protein D RAS_p140 SIMPL domain-containing protein K09797 K09797; uncharacterized protein D RAS_12970 aminotransferase K09985 K09985; uncharacterized protein D RAS_01490 hypothetical protein K09987 K09987; uncharacterized protein D RAS_03720 hypothetical protein K09991 K09991; uncharacterized protein D RAS_00850 hypothetical protein K07276 K07276; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 16, 2024