+D GENES KO
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KEGG Orthology (KO) - Rickettsiales bacterium Ac37b
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:rbt00010]
D NOVO_04745 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D NOVO_02410 glpX; Fructose-1,6-bisphosphatase class 2 K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D NOVO_02510 fbaB; Fructose-bisphosphate aldolase class 1 K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D NOVO_02285 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D NOVO_03745 gap; Glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D NOVO_03740 pgk; Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D NOVO_02460 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D NOVO_05890 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D NOVO_06880 ppdK; Pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D NOVO_03955 acoA; Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D NOVO_03950 pdhB; Pyruvate dehydrogenase E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D NOVO_03945 pdhC; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D NOVO_03505 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D NOVO_04620 lpd3; Dihydrolipoyl dehydrogenase 3 K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00020 Citrate cycle (TCA cycle) [PATH:rbt00020]
D NOVO_00160 aarA; Citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D NOVO_01260 acnA; Aconitate hydratase 1 K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D NOVO_03640 icd; Isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D NOVO_04610 sucA; 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D NOVO_04615 sucB; Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D NOVO_03505 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D NOVO_04620 lpd3; Dihydrolipoyl dehydrogenase 3 K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D NOVO_04605 sucD; Succinyl-CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D NOVO_04600 sucC; Succinyl-CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D NOVO_04470 sdhA; Succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D NOVO_04465 sdhB; Succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D NOVO_04480 sdhC; Succinate dehydrogenase cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D NOVO_04475 succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D NOVO_06500 fumC; Fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D NOVO_02195 mdh_1; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D NOVO_04595 mdh_2; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D NOVO_03955 acoA; Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D NOVO_03950 pdhB; Pyruvate dehydrogenase E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D NOVO_03945 pdhC; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:rbt00030]
D NOVO_04745 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D NOVO_08920 rpe; Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D NOVO_03750 tktA; Transketolase 1 K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D NOVO_04970 tal; Transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D NOVO_02175 rpiB; putative ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D NOVO_07235 prs; Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D NOVO_02510 fbaB; Fructose-bisphosphate aldolase class 1 K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D NOVO_02410 glpX; Fructose-1,6-bisphosphatase class 2 K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
C 00040 Pentose and glucuronate interconversions [PATH:rbt00040]
D NOVO_02840 ywqF; UDP-glucose 6-dehydrogenase ywqF K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D NOVO_02845 gtaB; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D NOVO_08920 rpe; Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
C 00051 Fructose and mannose metabolism [PATH:rbt00051]
D NOVO_04940 algA; Alginate biosynthesis protein AlgA K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D NOVO_09400 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D NOVO_02410 glpX; Fructose-1,6-bisphosphatase class 2 K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D NOVO_02510 fbaB; Fructose-bisphosphate aldolase class 1 K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D NOVO_02285 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D NOVO_02175 rpiB; putative ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
C 00052 Galactose metabolism
D NOVO_02845 gtaB; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
C 00053 Ascorbate and aldarate metabolism [PATH:rbt00053]
D NOVO_02840 ywqF; UDP-glucose 6-dehydrogenase ywqF K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D NOVO_02270 rfbB; dTDP-glucose 4,6-dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
C 00500 Starch and sucrose metabolism [PATH:rbt00500]
D NOVO_02845 gtaB; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D NOVO_04745 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00620 Pyruvate metabolism [PATH:rbt00620]
D NOVO_03955 acoA; Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D NOVO_03950 pdhB; Pyruvate dehydrogenase E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D NOVO_03945 pdhC; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D NOVO_03505 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D NOVO_04620 lpd3; Dihydrolipoyl dehydrogenase 3 K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D NOVO_07685 maeA; putative NAD-dependent malic enzyme 2 K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D NOVO_08155 tme; NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D NOVO_02195 mdh_1; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D NOVO_04595 mdh_2; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D NOVO_06500 fumC; Fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D NOVO_08665 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D NOVO_06880 ppdK; Pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D NOVO_05870 phbA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:rbt00630]
D NOVO_02195 mdh_1; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D NOVO_04595 mdh_2; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D NOVO_00160 aarA; Citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D NOVO_01260 acnA; Aconitate hydratase 1 K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D NOVO_05870 phbA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D NOVO_05865 fabG_2; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D NOVO_07485 accA1; Acetyl-/propionyl-coenzyme A carboxylase alpha chain K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3]
D NOVO_07490 accD5; putative propionyl-CoA carboxylase beta chain 5 K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D NOVO_03780 phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D NOVO_04205 phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D NOVO_06575 glnA; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D NOVO_07010 puuA; Gamma-glutamylputrescine synthetase PuuA K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D NOVO_02170 glyA2; Pyridoxal-phosphate-dependent serine hydroxymethyltransferase 2 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D NOVO_03505 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D NOVO_04620 lpd3; Dihydrolipoyl dehydrogenase 3 K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00640 Propanoate metabolism [PATH:rbt00640]
D NOVO_03505 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D NOVO_04620 lpd3; Dihydrolipoyl dehydrogenase 3 K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D NOVO_07485 accA1; Acetyl-/propionyl-coenzyme A carboxylase alpha chain K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3]
D NOVO_07490 accD5; putative propionyl-CoA carboxylase beta chain 5 K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D NOVO_04600 sucC; Succinyl-CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D NOVO_04605 sucD; Succinyl-CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D NOVO_01260 acnA; Aconitate hydratase 1 K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
C 00650 Butanoate metabolism [PATH:rbt00650]
D NOVO_05870 phbA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D NOVO_02210 putative 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D NOVO_05755 phbC; Poly-beta-hydroxybutyrate polymerase K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D NOVO_06740 poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D NOVO_01290 Poly-beta-hydroxyalkanoate depolymerase K05973 phaZ; poly(3-hydroxybutyrate) depolymerase [EC:3.1.1.75]
D NOVO_05865 fabG_2; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D NOVO_04470 sdhA; Succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D NOVO_04465 sdhB; Succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D NOVO_04480 sdhC; Succinate dehydrogenase cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D NOVO_04475 succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D NOVO_01840 gabD; Succinate-semialdehyde dehydrogenase [NADP(+)] GabD K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D NOVO_05780 scoA; putative succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D NOVO_05785 scoB; putative succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D NOVO_04770 bdhA; D-beta-hydroxybutyrate dehydrogenase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30]
D NOVO_06325 adc; putative acetoacetate decarboxylase K01574 adc; acetoacetate decarboxylase [EC:4.1.1.4]
C 00660 C5-Branched dibasic acid metabolism
D NOVO_04600 sucC; Succinyl-CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D NOVO_04605 sucD; Succinyl-CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
C 00562 Inositol phosphate metabolism [PATH:rbt00562]
D NOVO_02500 suhB; Inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D NOVO_02285 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 00566 Sulfoquinovose metabolism
D NOVO_02195 mdh_1; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D NOVO_04595 mdh_2; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:rbt00190]
D NOVO_08065 ndhC; NAD(P)H-quinone oxidoreductase subunit 3 K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D NOVO_08070 nuoB; NADH-quinone oxidoreductase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D NOVO_08075 nqo5; NADH-quinone oxidoreductase chain 5 K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D NOVO_08080 nuoD; NADH-quinone oxidoreductase subunit D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D NOVO_08085 nqo2; NADH-quinone oxidoreductase chain 2 K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D NOVO_08095 nqo1; NADH-quinone oxidoreductase chain 1 K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D NOVO_08100 nqo3; NADH-quinone oxidoreductase chain 3 K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D NOVO_08105 nuoH; NADH-quinone oxidoreductase subunit H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D NOVO_08110 nuoI; NADH-quinone oxidoreductase subunit I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D NOVO_08115 nuoJ; NADH-quinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D NOVO_08120 nuoK; NADH-quinone oxidoreductase subunit K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D NOVO_08125 nuoL; NADH-quinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D NOVO_08130 nuoM; NADH-quinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D NOVO_08135 nuoN; NADH-quinone oxidoreductase subunit N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D NOVO_04470 sdhA; Succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D NOVO_04465 sdhB; Succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D NOVO_04480 sdhC; Succinate dehydrogenase cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D NOVO_04475 succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D NOVO_01530 petA; Ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D NOVO_01525 petB; Cytochrome b K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D NOVO_01520 petC; Cytochrome c1 precursor K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D NOVO_08035 ctaB; Protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D NOVO_01490 ctaE; Cytochrome c oxidase subunit 3 K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D NOVO_07035 ctaD; Cytochrome c oxidase subunit 1 K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D NOVO_07030 ctaC; Cytochrome c oxidase subunit 2 precursor K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D NOVO_08040 ctaG; Cytochrome c oxidase assembly protein CtaG K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D NOVO_03270 ctaA; Heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9]
D NOVO_04715 cydA; Cytochrome d ubiquinol oxidase subunit 1 K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D NOVO_04710 cydB; Cytochrome d ubiquinol oxidase subunit 2 K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D NOVO_04705 putative outer membrane lipoprotein K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7]
D NOVO_01620 Cytochrome c2 K08738 CYC; cytochrome c
D NOVO_02890 atpA; ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D NOVO_03065 atpD; ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D NOVO_02885 atpG_1; F-ATPase gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D NOVO_02895 atpH; F-type ATPase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D NOVO_03060 atpC; F-ATPase epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D NOVO_02925 atpB; F-ATPase subunit 6 K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D NOVO_02910 atpF; F-type ATPase subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D NOVO_02915 atpG_2; F-type ATPase subunit b' K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D NOVO_02920 F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D NOVO_04965 ppa; Inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:rbt00710]
D NOVO_03740 pgk; Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D NOVO_03745 gap; Glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D NOVO_02510 fbaB; Fructose-bisphosphate aldolase class 1 K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D NOVO_02410 glpX; Fructose-1,6-bisphosphatase class 2 K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D NOVO_03750 tktA; Transketolase 1 K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D NOVO_02175 rpiB; putative ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D NOVO_02285 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D NOVO_08920 rpe; Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D NOVO_04970 tal; Transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D NOVO_08665 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D NOVO_06880 ppdK; Pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D NOVO_07685 maeA; putative NAD-dependent malic enzyme 2 K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D NOVO_08155 tme; NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D NOVO_02195 mdh_1; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D NOVO_04595 mdh_2; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
C 00720 Other carbon fixation pathways [PATH:rbt00720]
D NOVO_06880 ppdK; Pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D NOVO_08665 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D NOVO_02195 mdh_1; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D NOVO_04595 mdh_2; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D NOVO_06500 fumC; Fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D NOVO_04470 sdhA; Succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D NOVO_04465 sdhB; Succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D NOVO_04480 sdhC; Succinate dehydrogenase cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D NOVO_04475 succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D NOVO_04605 sucD; Succinyl-CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D NOVO_04600 sucC; Succinyl-CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D NOVO_05870 phbA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D NOVO_03640 icd; Isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D NOVO_01260 acnA; Aconitate hydratase 1 K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D NOVO_01645 folD; Bifunctional protein FolD protein K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
C 00680 Methane metabolism [PATH:rbt00680]
D NOVO_02170 glyA2; Pyridoxal-phosphate-dependent serine hydroxymethyltransferase 2 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D NOVO_05890 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D NOVO_08665 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D NOVO_02195 mdh_1; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D NOVO_04595 mdh_2; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D NOVO_02510 fbaB; Fructose-bisphosphate aldolase class 1 K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D NOVO_02410 glpX; Fructose-1,6-bisphosphatase class 2 K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D NOVO_02460 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
C 00910 Nitrogen metabolism [PATH:rbt00910]
D NOVO_05370 gdhB; NAD-specific glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D NOVO_06575 glnA; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D NOVO_07010 puuA; Gamma-glutamylputrescine synthetase PuuA K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D NOVO_00575 Carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:rbt00920]
D NOVO_03475 sbp; Sulfate-binding protein precursor K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D NOVO_03480 cysW_1; Sulfate transport system permease protein CysW K02046 cysU; sulfate/thiosulfate transport system permease protein
D NOVO_03485 cysW_2; Sulfate transport system permease protein CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D NOVO_03490 cysA; Sulfate/thiosulfate import ATP-binding protein CysA K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D NOVO_06605 cysQ; 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:rbt00061]
D NOVO_03630 acpP; Acyl carrier protein AcpP K02078 acpP; acyl carrier protein
D NOVO_02490 fabD; Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D NOVO_04365 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase 3 K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D NOVO_03625 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D NOVO_03635 fabG_1; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D NOVO_03035 fabZ; (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D NOVO_07570 fabI; Enoyl-[acyl-carrier-protein] reductase [NADH] FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D NOVO_07060 Nitronate monooxygenase K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:rbt00071]
D NOVO_05870 phbA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D NOVO_02210 putative 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
C 00073 Cutin, suberine and wax biosynthesis
C 00074 Mycolic acid biosynthesis [PATH:rbt00074]
D NOVO_04090 acpS; Holo-[acyl-carrier-protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D NOVO_03630 acpP; Acyl carrier protein AcpP K02078 acpP; acyl carrier protein
D NOVO_02490 fabD; Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:rbt00561]
D NOVO_04370 plsX; Phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D NOVO_03615 plsY; G3P acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D NOVO_01020 acylglycerophosphoethanolamine acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 00564 Glycerophospholipid metabolism [PATH:rbt00564]
D NOVO_03525 gpsA; Glycerol-3-phosphate dehydrogenase [NAD(P)+] K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D NOVO_03615 plsY; G3P acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D NOVO_01020 acylglycerophosphoethanolamine acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D NOVO_07650 pld_1; Phospholipase D precursor K17717 pld; phospholipase D [EC:3.1.4.4]
D NOVO_06895 cdsA; Phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D NOVO_05650 CDP-diacylglycerol-serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D NOVO_05645 phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D NOVO_00745 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D NOVO_00210 pgpA; Phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27]
D NOVO_02695 egsA; Glycerol-1-phosphate dehydrogenase [NAD(P)+] K00096 araM; glycerol-1-phosphate dehydrogenase [NAD(P)+] [EC:1.1.1.261]
C 00565 Ether lipid metabolism
D NOVO_07650 pld_1; Phospholipase D precursor K17717 pld; phospholipase D [EC:3.1.4.4]
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:rbt00230]
D NOVO_07235 prs; Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D NOVO_05630 purF; Amidophosphoribosyltransferase precursor K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D NOVO_00725 purD; Phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D NOVO_01405 purN; Phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D NOVO_04135 purL; Phosphoribosylformylglycinamidine synthase 2 K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]
D NOVO_04125 purS; phosphoribosylformylglycinamidine synthase K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3]
D NOVO_04130 purQ; Phosphoribosylformylglycinamidine synthase 1 K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D NOVO_01410 purM; Phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D NOVO_07145 purK; N5-carboxyaminoimidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D NOVO_07150 purE; N5-carboxyaminoimidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D NOVO_04120 purC; Phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D NOVO_06600 purB; Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D NOVO_03830 purH; Bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D NOVO_04315 yfiH; Laccase domain protein yfiH K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D NOVO_05185 guaB; Inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D NOVO_03900 ndk; Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D NOVO_06435 Non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D NOVO_04170 guaA; GMP synthase [glutamine-hydrolyzing] K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D NOVO_06720 gmk; Guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D NOVO_02335 nrdE; Ribonucleoside-diphosphate reductase 2 subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D NOVO_02330 nrdB; Ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D NOVO_00830 dgt; Deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D NOVO_03350 rsh; GTP pyrophosphokinase rsh K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D NOVO_05165 purA; Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D NOVO_06210 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00240 Pyrimidine metabolism [PATH:rbt00240]
D NOVO_08905 carB; Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D NOVO_09420 carbamoyl phosphate synthase-like protein K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D NOVO_08910 carA; Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D NOVO_01885 pyrB; Aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D NOVO_04200 pyrC; Dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D NOVO_07140 pyrD; Dihydroorotate dehydrogenase (quinone) K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D NOVO_07975 pyrE; Orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D NOVO_03595 orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D NOVO_03160 pyrH; Uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D NOVO_03900 ndk; Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D NOVO_04265 maf; Septum formation protein Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D NOVO_02275 pyrG; CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D NOVO_01825 cmk; Cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D NOVO_02335 nrdE; Ribonucleoside-diphosphate reductase 2 subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D NOVO_02330 nrdB; Ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D NOVO_00290 ComE operon protein 2 K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D NOVO_00810 tmk; Thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D NOVO_07175 dut; Deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D NOVO_03045 thyX; Thymidylate synthase thyX K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:rbt00250]
D NOVO_04030 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D NOVO_05165 purA; Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D NOVO_06600 purB; Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D NOVO_01885 pyrB; Aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D NOVO_01840 gabD; Succinate-semialdehyde dehydrogenase [NADP(+)] GabD K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D NOVO_05370 gdhB; NAD-specific glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D NOVO_08300 putA; Bifunctional protein putA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D NOVO_06575 glnA; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D NOVO_07010 puuA; Gamma-glutamylputrescine synthetase PuuA K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D NOVO_08905 carB; Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D NOVO_09420 carbamoyl phosphate synthase-like protein K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D NOVO_08910 carA; Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D NOVO_04130 purQ; Phosphoribosylformylglycinamidine synthase 1 K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D NOVO_05905 glmS; Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D NOVO_05630 purF; Amidophosphoribosyltransferase precursor K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:rbt00260]
D NOVO_06620 lysC; Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D NOVO_08580 asd2; Aspartate-semialdehyde dehydrogenase 2 K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D NOVO_02170 glyA2; Pyridoxal-phosphate-dependent serine hydroxymethyltransferase 2 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D NOVO_02460 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D NOVO_03265 hemA; 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37]
D NOVO_03505 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D NOVO_04620 lpd3; Dihydrolipoyl dehydrogenase 3 K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D NOVO_05650 CDP-diacylglycerol-serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
C 00270 Cysteine and methionine metabolism [PATH:rbt00270]
D NOVO_04775 metK; S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D NOVO_04315 yfiH; Laccase domain protein yfiH K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D NOVO_06620 lysC; Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D NOVO_08580 asd2; Aspartate-semialdehyde dehydrogenase 2 K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D NOVO_08485 ilvE; Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D NOVO_06040 putative protein involved in benzoate metabolism K01919 gshA; glutamate---cysteine ligase [EC:6.3.2.2]
D NOVO_04030 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D NOVO_02195 mdh_1; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D NOVO_04595 mdh_2; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
C 00280 Valine, leucine and isoleucine degradation [PATH:rbt00280]
D NOVO_08485 ilvE; Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D NOVO_03505 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D NOVO_04620 lpd3; Dihydrolipoyl dehydrogenase 3 K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D NOVO_07485 accA1; Acetyl-/propionyl-coenzyme A carboxylase alpha chain K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3]
D NOVO_07490 accD5; putative propionyl-CoA carboxylase beta chain 5 K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D NOVO_05780 scoA; putative succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D NOVO_05785 scoB; putative succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D NOVO_05870 phbA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:rbt00290]
D NOVO_08485 ilvE; Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
C 00300 Lysine biosynthesis [PATH:rbt00300]
D NOVO_06620 lysC; Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D NOVO_08580 asd2; Aspartate-semialdehyde dehydrogenase 2 K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D NOVO_08490 mosA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D NOVO_05050 dapB; Dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D NOVO_05395 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D NOVO_05260 astC; Succinylornithine transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D NOVO_05390 dapE; Succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D NOVO_01950 dapF; Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D NOVO_05860 lysA; Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D NOVO_00075 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D NOVO_02445 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:rbt00310]
D NOVO_04615 sucB; Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D NOVO_03505 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D NOVO_04620 lpd3; Dihydrolipoyl dehydrogenase 3 K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D NOVO_05870 phbA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D NOVO_01840 gabD; Succinate-semialdehyde dehydrogenase [NADP(+)] GabD K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D NOVO_00800 dat; D-alanine aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
C 00220 Arginine biosynthesis [PATH:rbt00220]
D NOVO_04130 purQ; Phosphoribosylformylglycinamidine synthase 1 K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D NOVO_06575 glnA; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D NOVO_07010 puuA; Gamma-glutamylputrescine synthetase PuuA K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D NOVO_08905 carB; Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D NOVO_09420 carbamoyl phosphate synthase-like protein K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D NOVO_08910 carA; Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D NOVO_05370 gdhB; NAD-specific glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D NOVO_04030 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D NOVO_05260 astC; Succinylornithine transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:rbt00330]
D NOVO_03775 proC; Pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D NOVO_08300 putA; Bifunctional protein putA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D NOVO_00875 proB; Glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D NOVO_00880 proA; Gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D NOVO_04030 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D NOVO_00800 dat; D-alanine aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
C 00340 Histidine metabolism [PATH:rbt00340]
D NOVO_01090 hisC2; Histidinol-phosphate aminotransferase 2 K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D NOVO_06040 putative protein involved in benzoate metabolism K01919 gshA; glutamate---cysteine ligase [EC:6.3.2.2]
C 00350 Tyrosine metabolism [PATH:rbt00350]
D NOVO_04030 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D NOVO_01090 hisC2; Histidinol-phosphate aminotransferase 2 K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D NOVO_01840 gabD; Succinate-semialdehyde dehydrogenase [NADP(+)] GabD K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00360 Phenylalanine metabolism [PATH:rbt00360]
D NOVO_04030 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D NOVO_01090 hisC2; Histidinol-phosphate aminotransferase 2 K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D NOVO_00800 dat; D-alanine aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D NOVO_02090 leuA; 2-isopropylmalate synthase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
C 00380 Tryptophan metabolism [PATH:rbt00380]
D NOVO_07770 tryptophan 2,3-dioxygenase K00453 TDO2; tryptophan 2,3-dioxygenase [EC:1.13.11.11]
D NOVO_04615 sucB; Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D NOVO_03505 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D NOVO_04620 lpd3; Dihydrolipoyl dehydrogenase 3 K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D NOVO_05870 phbA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:rbt00400]
D NOVO_03680 aroK; Shikimate kinase 1 K00891 aroK; shikimate kinase [EC:2.7.1.71]
D NOVO_02900 trpD; Anthranilate synthase component II K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D NOVO_04030 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D NOVO_01090 hisC2; Histidinol-phosphate aminotransferase 2 K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism
C 00430 Taurine and hypotaurine metabolism
D NOVO_05370 gdhB; NAD-specific glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
C 00440 Phosphonate and phosphinate metabolism
D NOVO_02700 phnP; Metallo-beta-lactamase family protein K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]
C 00450 Selenocompound metabolism [PATH:rbt00450]
D NOVO_00275 trxB; Thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D NOVO_01650 Ferredoxin--NADP reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D NOVO_06425 metG; Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism
D NOVO_02170 glyA2; Pyridoxal-phosphate-dependent serine hydroxymethyltransferase 2 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:rbt00470]
D NOVO_01960 dadX; Alanine racemase, catabolic K01775 alr; alanine racemase [EC:5.1.1.1]
D NOVO_00800 dat; D-alanine aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D NOVO_03175 ddlB; D-alanine--D-alanine ligase B K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D NOVO_04130 purQ; Phosphoribosylformylglycinamidine synthase 1 K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D NOVO_02775 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D NOVO_01950 dapF; Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D NOVO_05860 lysA; Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:rbt00480]
D NOVO_06040 putative protein involved in benzoate metabolism K01919 gshA; glutamate---cysteine ligase [EC:6.3.2.2]
D NOVO_05015 gshB; Glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D NOVO_00890 pepA; Cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D NOVO_02935 stringent starvation protein A K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D NOVO_03640 icd; Isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
B
B 09107 Glycan biosynthesis and metabolism
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:rbt00520]
D NOVO_04335 anmK; Anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D NOVO_04485 CTP:phosphocholine cytidylyltransferase involved in choline phosphorylation for cell surface LPS epitopes K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99]
D NOVO_05290 glmU; Bifunctional protein GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D NOVO_00750 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D NOVO_08250 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D NOVO_02265 glycoside hydrolase family protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D NOVO_06805 ybbD_2; glycoside hydrolase family protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D NOVO_05045 glmM; Phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D NOVO_05905 glmS; Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D NOVO_04745 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D NOVO_04940 algA; Alginate biosynthesis protein AlgA K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D NOVO_02270 rfbB; dTDP-glucose 4,6-dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D NOVO_02845 gtaB; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D NOVO_02840 ywqF; UDP-glucose 6-dehydrogenase ywqF K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D NOVO_01855 rmlA; Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
C 00541 Biosynthesis of various nucleotide sugars [PATH:rbt00541]
D NOVO_05290 glmU; Bifunctional protein GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D NOVO_03865 kdsD; Arabinose 5-phosphate isomerase KdsD K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D NOVO_06450 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D NOVO_08480 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D NOVO_02845 gtaB; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D NOVO_02840 ywqF; UDP-glucose 6-dehydrogenase ywqF K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D NOVO_01855 rmlA; Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D NOVO_04740 rffG; dTDP-glucose 4,6-dehydratase 2 K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D NOVO_04940 algA; Alginate biosynthesis protein AlgA K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D NOVO_09400 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D NOVO_09405 arnB_2; UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase K13010 per; perosamine synthetase [EC:2.6.1.102]
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis [PATH:rbt00540]
D NOVO_03030 lpxA; Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D NOVO_00665 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D NOVO_03040 lpxD; UDP-3-O-acylglucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D NOVO_03025 hypothetical protein K09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D NOVO_08060 lpxB; Lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D NOVO_02790 lpxK; Tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D NOVO_07345 waaA; 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D NOVO_03815 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
C 00542 O-Antigen repeat unit biosynthesis
C 00550 Peptidoglycan biosynthesis [PATH:rbt00550]
D NOVO_00750 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D NOVO_08250 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D NOVO_00205 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D NOVO_02775 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D NOVO_00075 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D NOVO_03175 ddlB; D-alanine--D-alanine ligase B K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D NOVO_02445 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D NOVO_06890 uppS; Undecaprenyl pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D NOVO_02440 mraY; Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D NOVO_00260 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D NOVO_03655 pbpD; Penicillin-binding protein 4 precursor K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D NOVO_05135 mrcA; Penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D NOVO_00265 ftsW; Cell division protein FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D NOVO_01655 mrdB; Rod shape-determining protein RodA K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D NOVO_08245 ftsI; Peptidoglycan synthase FtsI precursor K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D NOVO_00070 penA; Penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D NOVO_06920 dacA; D-alanyl-D-alanine carboxypeptidase dacA precursor K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D NOVO_06925 dacD; D-alanyl-D-alanine carboxypeptidase dacD precursor K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D NOVO_01935 dacB; D-alanyl-D-alanine carboxypeptidase dacB precursor K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
C 00552 Teichoic acid biosynthesis
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:rbt00730]
D NOVO_00650 thiD; Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D NOVO_05085 nifS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D NOVO_05090 iscS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D NOVO_07270 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D NOVO_00655 thiM; Hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D NOVO_00660 thiE; Thiamine-phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D NOVO_07500 thiL; Thiamine-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D NOVO_06210 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D NOVO_08600 tenA; Thiaminase-2 K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
C 00740 Riboflavin metabolism [PATH:rbt00740]
D NOVO_03365 ribA; GTP cyclohydrolase-2 K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D NOVO_08000 ribBA; Riboflavin biosynthesis protein ribBA K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D NOVO_08010 ribD; Riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D NOVO_07995 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D NOVO_08005 ribE; Riboflavin synthase alpha chain K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D NOVO_07990 ribF_2; Riboflavin biosynthesis protein ribF K00861 RFK; riboflavin kinase [EC:2.7.1.26]
D NOVO_03145 ribF_1; Riboflavin biosynthesis protein ribF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D NOVO_00655 thiM; Hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D NOVO_00200 bsdB; Phenolic acid decarboxylase subunit B K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00750 Vitamin B6 metabolism [PATH:rbt00750]
D NOVO_04230 pdxH; Pyridoxine/pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D NOVO_04095 pdxJ; Pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
C 00760 Nicotinate and nicotinamide metabolism [PATH:rbt00760]
D NOVO_03110 Bifunctional NMN adenylyltransferase/Nudix hydrolase K13522 K13522; bifunctional NMN adenylyltransferase/nudix hydrolase [EC:2.7.7.1 3.6.1.-]
D NOVO_03105 putative nicotinate phosphoribosyltransferase K03462 NAMPT; nicotinamide phosphoribosyltransferase [EC:2.4.2.12]
D NOVO_08890 ppnK; putative inorganic polyphosphate/ATP-NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D NOVO_03310 NAD(P) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D NOVO_03315 pntAA; NAD(P) transhydrogenase subunit alpha part 1 K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D NOVO_03305 pntB; NAD(P) transhydrogenase subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
D NOVO_01840 gabD; Succinate-semialdehyde dehydrogenase [NADP(+)] GabD K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:rbt00770]
D NOVO_08145 coaX; Type III pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D NOVO_02605 coaD; Phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D NOVO_04565 coaE; Dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D NOVO_04090 acpS; Holo-[acyl-carrier-protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D NOVO_08485 ilvE; Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
C 00780 Biotin metabolism [PATH:rbt00780]
D NOVO_03280 bioC; Malonyl-CoA O-methyltransferase BioC K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197]
D NOVO_03625 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D NOVO_03635 fabG_1; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D NOVO_03035 fabZ; (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D NOVO_07570 fabI; Enoyl-[acyl-carrier-protein] reductase [NADH] FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D NOVO_01545 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D NOVO_00220 bioA; Adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D NOVO_03275 bioD; ATP-dependent dethiobiotin synthetase BioD K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D NOVO_06375 bioB; Biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D NOVO_08140 birA; Bifunctional protein BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:rbt00785]
D NOVO_04415 lipB; Octanoyltransferase K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D NOVO_03555 lipA; Lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D NOVO_03505 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D NOVO_04620 lpd3; Dihydrolipoyl dehydrogenase 3 K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D NOVO_03955 acoA; Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D NOVO_03950 pdhB; Pyruvate dehydrogenase E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D NOVO_03945 pdhC; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D NOVO_04610 sucA; 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D NOVO_04615 sucB; Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
C 00790 Folate biosynthesis [PATH:rbt00790]
D NOVO_03250 folE; GTP cyclohydrolase 1 K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D NOVO_04360 FolB domain protein K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D NOVO_04355 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D NOVO_03610 folP; Dihydropteroate synthase K13941 folKP; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase / dihydropteroate synthase [EC:2.7.6.3 2.5.1.15]
D NOVO_03590 folC; Bifunctional protein folC K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D NOVO_03365 ribA; GTP cyclohydrolase-2 K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D NOVO_08000 ribBA; Riboflavin biosynthesis protein ribBA K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
C 00670 One carbon pool by folate [PATH:rbt00670]
D NOVO_01645 folD; Bifunctional protein FolD protein K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D NOVO_02170 glyA2; Pyridoxal-phosphate-dependent serine hydroxymethyltransferase 2 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D NOVO_01405 purN; Phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D NOVO_03830 purH; Bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D NOVO_03045 thyX; Thymidylate synthase thyX K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D NOVO_03345 hypothetical protein K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
D NOVO_04775 metK; S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D NOVO_03505 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D NOVO_04620 lpd3; Dihydrolipoyl dehydrogenase 3 K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:rbt00860]
D NOVO_03265 hemA; 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37]
D NOVO_03050 gltX; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D NOVO_07565 gltX1; Glutamate--tRNA ligase 1 K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D NOVO_05915 hemB; Delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D NOVO_02325 hemC; Porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D NOVO_04900 uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D NOVO_04575 hemE; Uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D NOVO_05310 hemF; Coproporphyrinogen-III oxidase, aerobic K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D NOVO_04585 putative membrane protein K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-]
D NOVO_04580 hemH; Ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D NOVO_08035 ctaB; Protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D NOVO_03270 ctaA; Heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:rbt00130]
D NOVO_04895 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D NOVO_04750 ubiD; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98]
D NOVO_00200 bsdB; Phenolic acid decarboxylase subunit B K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D NOVO_06670 ubiG; 3-demethylubiquinone-9 3-methyltransferase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
D NOVO_05710 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
D NOVO_00515 ubiE; Ubiquinone/menaquinone biosynthesis methyltransferase ubiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D NOVO_02960 coq7; 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase K06134 coq7; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:rbt00900]
D NOVO_07270 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D NOVO_00695 dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D NOVO_02905 ispDF; Bifunctional enzyme IspD/IspF K12506 ispDF; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase / 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:2.7.7.60 4.6.1.12]
D NOVO_06485 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D NOVO_05950 ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D NOVO_05760 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D NOVO_05870 phbA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D NOVO_00200 bsdB; Phenolic acid decarboxylase subunit B K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D NOVO_01640 Farnesyl diphosphate synthase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D NOVO_03975 ispB; Octaprenyl-diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D NOVO_06890 uppS; Undecaprenyl pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D NOVO_03750 tktA; Transketolase 1 K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:rbt00523]
D NOVO_01855 rmlA; Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D NOVO_04740 rffG; dTDP-glucose 4,6-dehydratase 2 K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
D NOVO_04740 rffG; dTDP-glucose 4,6-dehydratase 2 K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis [PATH:rbt00332]
D NOVO_00875 proB; Glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D NOVO_00880 proA; Gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:rbt00261]
D NOVO_06620 lysC; Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D NOVO_08580 asd2; Aspartate-semialdehyde dehydrogenase 2 K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D NOVO_08490 mosA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D NOVO_05050 dapB; Dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:rbt00521]
D NOVO_02500 suhB; Inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D NOVO_01855 rmlA; Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D NOVO_04740 rffG; dTDP-glucose 4,6-dehydratase 2 K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
C 00525 Acarbose and validamycin biosynthesis [PATH:rbt00525]
D NOVO_01855 rmlA; Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D NOVO_04740 rffG; dTDP-glucose 4,6-dehydratase 2 K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:rbt00401]
D NOVO_04030 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D NOVO_01090 hisC2; Histidinol-phosphate aminotransferase 2 K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
C 00333 Prodigiosin biosynthesis
D NOVO_02490 fabD; Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D NOVO_03635 fabG_1; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D NOVO_07570 fabI; Enoyl-[acyl-carrier-protein] reductase [NADH] FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00975 Biosynthesis of various siderophores
C 00998 Biosynthesis of various antibiotics
D NOVO_03630 acpP; Acyl carrier protein AcpP K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites
D NOVO_04775 metK; S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:rbt00362]
D NOVO_02090 leuA; 2-isopropylmalate synthase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
D NOVO_05115 fdx; 2Fe-2S ferredoxin K04755 fdx; ferredoxin, 2Fe-2S
D NOVO_02210 putative 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D NOVO_05870 phbA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation
D NOVO_00200 bsdB; Phenolic acid decarboxylase subunit B K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
D NOVO_02090 leuA; 2-isopropylmalate synthase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
D NOVO_02090 leuA; 2-isopropylmalate synthase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
C 00626 Naphthalene degradation
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:rbt03020]
D NOVO_02635 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D NOVO_02630 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D NOVO_06225 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D NOVO_00615 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:rbt03010]
D NOVO_03225 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D NOVO_06390 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D NOVO_06395 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D NOVO_01820 rpsA; Ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D NOVO_03170 rpsB; Ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D NOVO_06135 rpsC; Ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D NOVO_07250 rpsD; Ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D NOVO_06190 rpsE; Ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D NOVO_04975 rpsF; Ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D NOVO_02685 rpsG; Ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D NOVO_06175 rpsH; Ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D NOVO_04165 rpsI; Ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D NOVO_06100 rpsJ; Ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D NOVO_06220 rpsK; Ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D NOVO_02690 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D NOVO_06215 rpsM; Ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D NOVO_06170 rpsN; Ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D NOVO_02160 rpsO; Ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D NOVO_02855 rpsP; Ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D NOVO_06150 rpsQ; Ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D NOVO_04980 rpsR; Ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D NOVO_06125 rpsS; Ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D NOVO_08160 rpsT; Ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D NOVO_02940 rpsU; Ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D NOVO_02650 rplA; Ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D NOVO_06120 rplB; Ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D NOVO_06105 rplC; Ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D NOVO_06110 rplD; Ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D NOVO_06165 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D NOVO_06180 rplF; Ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D NOVO_04985 rplI; Ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D NOVO_02645 rplJ; Ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D NOVO_02655 rplK; Ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D NOVO_02640 rplL; Ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D NOVO_04160 rplM; Ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D NOVO_06155 rplN; Ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D NOVO_06200 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D NOVO_06140 rplP; Ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D NOVO_06230 rplQ; Ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D NOVO_06185 rplR; Ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D NOVO_01430 rplS; Ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D NOVO_02575 rplT; Ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D NOVO_03600 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D NOVO_06130 rplV; Ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D NOVO_06115 rplW; Ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D NOVO_06160 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D NOVO_07240 rplY; Ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D NOVO_03605 rpmA; Ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D NOVO_04625 rpmB; Ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D NOVO_06145 rpmC; Ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D NOVO_06195 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D NOVO_04630 rpmE; Ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D NOVO_04375 rpmF; Ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D NOVO_02850 rpmG; Ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D NOVO_02580 rpmI; Ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D NOVO_05900 rpmJ2; 50S ribosomal protein L36 2 K02919 RP-L36; large subunit ribosomal protein L36
C 00970 Aminoacyl-tRNA biosynthesis [PATH:rbt00970]
D NOVO_04555 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D NOVO_04720 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D NOVO_00910 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D NOVO_03570 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D NOVO_05520 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D NOVO_07810 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D NOVO_02595 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D NOVO_07180 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D NOVO_07935 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D NOVO_03070 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D NOVO_08615 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D NOVO_05735 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D NOVO_02370 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D NOVO_06090 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D NOVO_05850 tRNA-His K14226 tRNA-His; tRNA His
D NOVO_03535 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D NOVO_02760 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D NOVO_03875 tRNA-Ser K14228 tRNA-Leu; tRNA Leu
D NOVO_06255 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D NOVO_06845 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D NOVO_07915 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D NOVO_01660 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D NOVO_08475 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D NOVO_00165 tRNA-Met K14230 tRNA-Met; tRNA Met
D NOVO_04220 tRNA-Met K14230 tRNA-Met; tRNA Met
D NOVO_05770 tRNA-Met K14230 tRNA-Met; tRNA Met
D NOVO_02970 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D NOVO_01890 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D NOVO_04960 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D NOVO_05325 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D NOVO_06580 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D NOVO_05895 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D NOVO_07100 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D NOVO_07655 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D NOVO_02670 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D NOVO_06085 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D NOVO_04440 tRNA-Val K14237 tRNA-Val; tRNA Val
D NOVO_05875 tRNA-Val K14237 tRNA-Val; tRNA Val
D NOVO_03050 gltX; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D NOVO_07565 gltX1; Glutamate--tRNA ligase 1 K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D NOVO_05200 gatA; Glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D NOVO_05205 gatB; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D NOVO_05195 gatC; Glutamyl-tRNA(Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D NOVO_05675 alaS; Alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D NOVO_00630 aspS; Aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D NOVO_06870 glyQ; Glycine--tRNA ligase alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D NOVO_06875 glyS; Glycine--tRNA ligase beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D NOVO_06850 thrS; Threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D NOVO_01505 serS; Serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D NOVO_06785 cysS; Cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D NOVO_06425 metG; Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D NOVO_04445 fmt; Methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D NOVO_02880 valS; Valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D NOVO_04020 leuS; Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D NOVO_03520 ileS; Isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D NOVO_02950 lysS; Lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D NOVO_01360 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D NOVO_07695 argS; Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D NOVO_01925 proS; Proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D NOVO_08690 hisS; Histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D NOVO_02245 pheS; Phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D NOVO_02240 pheT; Phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D NOVO_04800 tyrS; Tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D NOVO_04650 trpS; Tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
D NOVO_02450 rnc; Ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3]
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:rbt03060]
D NOVO_06205 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D NOVO_02665 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D NOVO_02280 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D NOVO_00825 secD; preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D NOVO_08845 secF; preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D NOVO_08170 hypothetical protein K03210 yajC; preprotein translocase subunit YajC
D NOVO_03435 yidC; Oxa1Ec K03217 yidC; YidC/Oxa1 family membrane protein insertase
D NOVO_08340 secA_2; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D NOVO_04520 secB; Protein-export protein SecB K03071 secB; preprotein translocase subunit SecB
D NOVO_07635 ffh; p48 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D NOVO_01940 ftsY; Cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D NOVO_05130 twin arginine translocase protein A K03116 tatA; sec-independent protein translocase protein TatA
D NOVO_01510 tatC; Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC
D NOVO_02455 lepB; Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D NOVO_03140 lspA; Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
D NOVO_06295 htpG; High temperature protein G K04079 HSP90A; molecular chaperone HtpG
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:rbt04122]
D NOVO_05085 nifS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D NOVO_05090 iscS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D NOVO_03970 mnmA; tRNA-specific 2-thiouridylase mnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
C 03050 Proteasome
C 03018 RNA degradation [PATH:rbt03018]
D NOVO_03920 rppH; RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D NOVO_02255 rne; Ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D NOVO_05890 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D NOVO_02155 pnp; Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D NOVO_04590 rho; Transcription termination factor Rho K03628 rho; transcription termination factor Rho
D NOVO_08150 Ribonuclease J 1 K12574 rnj; ribonuclease J [EC:3.1.-.-]
D NOVO_07960 dnaK; Heat shock protein 70 K04043 dnaK; molecular chaperone DnaK
D NOVO_08195 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D NOVO_07920 cca; CCA-adding enzyme K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:rbt03030]
D NOVO_04560 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D NOVO_02200 dnaE1; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D NOVO_06760 dnaX_2; DNA polymerase III subunit tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D NOVO_03565 dnaX_1; DNA polymerase III subunit tau K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D NOVO_05525 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D NOVO_00885 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D NOVO_08275 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D NOVO_01955 dnaC; Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D NOVO_06550 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D NOVO_07395 ssb; Helix-destabilizing protein K03111 ssb; single-strand DNA-binding protein
D NOVO_04645 rnhA; Ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D NOVO_08880 rnhB; Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D NOVO_08680 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:rbt03410]
D NOVO_04110 nth; Endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D NOVO_07580 mutM; Formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D NOVO_05155 tag; DNA-3-methyladenine glycosylase 1 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D NOVO_07135 uracil-DNA glycosylase, family 4 K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D NOVO_00525 xthA_1; Exodeoxyribonuclease III K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2]
D NOVO_01605 xthA_2; Exodeoxyribonuclease III K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2]
D NOVO_04150 recJ; Single-stranded-DNA-specific exonuclease recJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D NOVO_08680 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:rbt03420]
D NOVO_07065 mfd; Transcription-repair-coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D NOVO_07390 uvrA; Excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D NOVO_04055 uvrB; UvrB K03702 uvrB; excinuclease ABC subunit B
D NOVO_00740 uvrC; Excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D NOVO_05910 pcrA; ATP-dependent DNA helicase pcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D NOVO_08680 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:rbt03430]
D NOVO_00185 mutS; DNA mismatch repair protein mutS K03555 mutS; DNA mismatch repair protein MutS
D NOVO_02475 mutL; DNA mismatch repair protein mutL K03572 mutL; DNA mismatch repair protein MutL
D NOVO_05910 pcrA; ATP-dependent DNA helicase pcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D NOVO_00730 xseA; Exodeoxyribonuclease 7 large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D NOVO_04805 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D NOVO_04150 recJ; Single-stranded-DNA-specific exonuclease recJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D NOVO_07395 ssb; Helix-destabilizing protein K03111 ssb; single-strand DNA-binding protein
D NOVO_02200 dnaE1; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D NOVO_08275 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D NOVO_06760 dnaX_2; DNA polymerase III subunit tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D NOVO_05525 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D NOVO_03565 dnaX_1; DNA polymerase III subunit tau K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D NOVO_04560 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D NOVO_00885 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D NOVO_08680 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:rbt03440]
D NOVO_04150 recJ; Single-stranded-DNA-specific exonuclease recJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D NOVO_07395 ssb; Helix-destabilizing protein K03111 ssb; single-strand DNA-binding protein
D NOVO_04080 recF; DNA replication and repair protein recF K03629 recF; DNA replication and repair protein RecF
D NOVO_06610 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D NOVO_06750 recR; Recombination protein RecR K06187 recR; recombination protein RecR
D NOVO_07385 recA; Recombinase A K03553 recA; recombination protein RecA
D NOVO_04250 ruvA; Holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D NOVO_04245 ruvB; Holliday junction ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D NOVO_04255 ruvC; Crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D NOVO_06050 recG; ATP-dependent DNA helicase recG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D NOVO_02200 dnaE1; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D NOVO_08275 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D NOVO_06760 dnaX_2; DNA polymerase III subunit tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D NOVO_05525 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D NOVO_03565 dnaX_1; DNA polymerase III subunit tau K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D NOVO_04560 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D NOVO_00885 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D NOVO_08750 priA; Primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus and Alphavirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03273 Virion - Lassa virus and SFTS virus
C 03272 Virion - Hepatitis viruses
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:rbt02010]
D NOVO_03475 sbp; Sulfate-binding protein precursor K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D NOVO_03480 cysW_1; Sulfate transport system permease protein CysW K02046 cysU; sulfate/thiosulfate transport system permease protein
D NOVO_03485 cysW_2; Sulfate transport system permease protein CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D NOVO_03490 cysA; Sulfate/thiosulfate import ATP-binding protein CysA K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D NOVO_02980 mlaC; putative phospholipid-binding protein mlaC precursor K07323 mlaC; phospholipid transport system substrate-binding protein
D NOVO_04635 mlaD; putative phospholipid ABC transporter-binding protein mlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D NOVO_03235 mlaE; putative phospholipid ABC transporter permease protein mlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D NOVO_03240 putative ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D NOVO_01500 sphX; SphX K02040 pstS; phosphate transport system substrate-binding protein
D NOVO_06950 pstC; Phosphate transport system permease protein pstC K02037 pstC; phosphate transport system permease protein
D NOVO_06955 pstA; Phosphate transport system permease protein pstA K02038 pstA; phosphate transport system permease protein
D NOVO_06965 pstB; Phosphate import ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D NOVO_03340 artP; Arginine-binding extracellular protein ArtP precursor K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein
D NOVO_03335 artQ; Arginine transport system permease protein ArtQ K17077 artQ; arginine/lysine/histidine transport system permease protein
D NOVO_03330 artM; Arginine transport ATP-binding protein ArtM K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D NOVO_08895 znuA; High-affinity zinc uptake system protein znuA precursor K09815 znuA; zinc transport system substrate-binding protein
D NOVO_01550 znuB; High-affinity zinc uptake system membrane protein znuB K09816 znuB; zinc transport system permease protein
D NOVO_06405 znuC; Zinc import ATP-binding protein ZnuC K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D NOVO_09435 ABC-2 type sugar transporter K09690 wzm; homopolymeric O-antigen transport system permease protein
D NOVO_01845 lolC; Lipoprotein-releasing system transmembrane protein lolC K09808 lolC_E_F; lipoprotein-releasing system permease protein
D NOVO_01850 lolD; Lipoprotein-releasing system ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D NOVO_04320 ccmC; Cytochrome c-type biogenesis protein CcmC K02195 ccmC; heme exporter protein C
D NOVO_05285 heme exporter protein CcmB K02194 ccmB; heme exporter protein B
D NOVO_09015 ccmA; Cytochrome c biogenesis ATP-binding export protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D NOVO_04235 lipopolysaccharide ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein
D NOVO_05535 lptG; Lipopolysaccharide export system permease protein lptG K11720 lptG; lipopolysaccharide export system permease protein
D NOVO_03850 lptB; Lipopolysaccharide export system ATP-binding protein LptB K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D NOVO_05935 msbA; Lipid A export ATP-binding/permease protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D NOVO_08805 Putative multidrug export ATP-binding/permease protein K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
D NOVO_04955 prsD; Type I secretion system ATP-binding protein PrsD K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
C 02060 Phosphotransferase system (PTS)
C 03070 Bacterial secretion system [PATH:rbt03070]
D NOVO_07940 bepC; Outer membrane efflux protein BepC precursor K12340 tolC; outer membrane protein
D NOVO_00825 secD; preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D NOVO_08845 secF; preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D NOVO_02665 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D NOVO_02280 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D NOVO_06205 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D NOVO_08170 hypothetical protein K03210 yajC; preprotein translocase subunit YajC
D NOVO_03435 yidC; Oxa1Ec K03217 yidC; YidC/Oxa1 family membrane protein insertase
D NOVO_08340 secA_2; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D NOVO_01940 ftsY; Cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D NOVO_04520 secB; Protein-export protein SecB K03071 secB; preprotein translocase subunit SecB
D NOVO_07635 ffh; p48 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D NOVO_05130 twin arginine translocase protein A K03116 tatA; sec-independent protein translocase protein TatA
D NOVO_01510 tatC; Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC
D NOVO_07275 type IV secretion system protein VirB3 K03198 virB3; type IV secretion system protein VirB3
D NOVO_03395 virB9_1; Type IV secretion system protein virB9 precursor K03204 virB9; type IV secretion system protein VirB9
D NOVO_06490 virB9_2; Type IV secretion system protein virB9 precursor K03204 virB9; type IV secretion system protein VirB9
D NOVO_07285 TrbL/VirB6 plasmid conjugal transfer protein K03201 virB6; type IV secretion system protein VirB6
D NOVO_07290 TrbL/VirB6 plasmid conjugal transfer protein K03201 virB6; type IV secretion system protein VirB6
D NOVO_07295 TrbL/VirB6 plasmid conjugal transfer protein K03201 virB6; type IV secretion system protein VirB6
D NOVO_07305 TrbL/VirB6 plasmid conjugal transfer protein K03201 virB6; type IV secretion system protein VirB6
D NOVO_07310 TrbL/VirB6 plasmid conjugal transfer protein K03201 virB6; type IV secretion system protein VirB6
D NOVO_03400 virB8; Type IV secretion system protein virB8 K03203 virB8; type IV secretion system protein VirB8
D NOVO_06495 ptlE; Pertussis toxin liberation protein E K03203 virB8; type IV secretion system protein VirB8
D NOVO_03390 Type IV secretion system protein virB10 K03195 virB10; type IV secretion system protein VirB10
D NOVO_02345 virB4_2; Type IV secretion system protein virB4 K03199 virB4; type IV secretion system protein VirB4 [EC:7.4.2.8]
D NOVO_07280 virB4_3; Type IV secretion system protein virB4 K03199 virB4; type IV secretion system protein VirB4 [EC:7.4.2.8]
D NOVO_03385 ptlH_2; Pertussis toxin liberation protein H K03196 virB11; type IV secretion system protein VirB11 [EC:7.4.2.8]
D NOVO_03380 traG; Conjugal transfer protein traG K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:rbt02020]
D NOVO_05970 phoR; Phosphate regulon sensor protein phoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D NOVO_06970 phoB; Phosphate regulon transcriptional regulatory protein phoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D NOVO_01500 sphX; SphX K02040 pstS; phosphate transport system substrate-binding protein
D NOVO_02715 envZ; Osmolarity sensor protein EnvZ K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D NOVO_06745 ompR; Transcriptional regulatory protein OmpR K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D NOVO_05595 mucD; putative periplasmic serine endoprotease DegP-like precursor K04771 degP; serine protease Do [EC:3.4.21.107]
D NOVO_07435 fliC; A-type flagellin K02406 fliC; flagellin
D NOVO_06065 motA; Chemotaxis protein MotA K02556 motA; chemotaxis protein MotA
D NOVO_02485 kdpE; KDP operon transcriptional regulatory protein KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D NOVO_03270 ctaA; Heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9]
D NOVO_01535 yycG_2; Sensor histidine kinase YycG K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D NOVO_08270 dnaA; Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D NOVO_05530 vanX; D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D NOVO_02535 hypothetical protein K03563 csrA; carbon storage regulator
D NOVO_03890 Flp pilus assembly protein, secretin CpaC K02280 cpaC; pilus assembly protein CpaC
D NOVO_06575 glnA; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D NOVO_07010 puuA; Gamma-glutamylputrescine synthetase PuuA K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D NOVO_07815 walK; Sensor protein kinase walK K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D NOVO_00805 glnG; Nitrogen regulation protein NR(I) K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D NOVO_05870 phbA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D NOVO_02420 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D NOVO_06505 cheR; Chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D NOVO_04505 aer; Aerotaxis receptor K03406 mcp; methyl-accepting chemotaxis protein
D NOVO_05215 bdlA; Chemotaxis regulator BdlA K03406 mcp; methyl-accepting chemotaxis protein
D NOVO_06520 purine-binding chemotaxis protein K03408 cheW; purine-binding chemotaxis protein CheW
D NOVO_06525 cheA; Chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D NOVO_04545 cheY_1; Chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D NOVO_06515 cheY_2; Chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D NOVO_06510 cheB; Chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D NOVO_03935 pleD_2; Stalked cell differentiation-controlling protein K02488 pleD; two-component system, cell cycle response regulator [EC:2.7.7.65]
D NOVO_06530 hypothetical protein K13588 chpT; histidine phosphotransferase ChpT
D NOVO_03785 ctrA; Cell cycle response regulator CtrA K13584 ctrA; two-component system, cell cycle response regulator CtrA
D NOVO_01530 petA; Ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D NOVO_01525 petB; Cytochrome b K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D NOVO_01520 petC; Cytochrome c1 precursor K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D NOVO_01620 Cytochrome c2 K08738 CYC; cytochrome c
D NOVO_04715 cydA; Cytochrome d ubiquinol oxidase subunit 1 K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D NOVO_04710 cydB; Cytochrome d ubiquinol oxidase subunit 2 K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D NOVO_04705 putative outer membrane lipoprotein K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7]
D NOVO_07940 bepC; Outer membrane efflux protein BepC precursor K12340 tolC; outer membrane protein
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04082 Neuroactive ligand signaling
C 04081 Hormone signaling
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecule (CAM) interaction
C 04517 IgSF CAM signaling
C 04518 Integrin signaling
C 04519 Cadherin signaling
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagocytosis
C 04142 Lysosome biogenesis
C 04146 Peroxisome [PATH:rbt04146]
D NOVO_03640 icd; Isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D NOVO_03095 sodB; Superoxide dismutase [Fe] K04564 SOD2; superoxide dismutase, Fe-Mn family [EC:1.15.1.1]
C 04149 Peroxisome - yeast
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
D NOVO_01530 petA; Ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
C 04156 Integrated stress response (ISR) signaling pathway [PATH:rbt04156]
D NOVO_06295 htpG; High temperature protein G K04079 HSP90A; molecular chaperone HtpG
D NOVO_00165 tRNA-Met K14230 tRNA-Met; tRNA Met
D NOVO_04220 tRNA-Met K14230 tRNA-Met; tRNA Met
D NOVO_05770 tRNA-Met K14230 tRNA-Met; tRNA Met
D NOVO_07960 dnaK; Heat shock protein 70 K04043 dnaK; molecular chaperone DnaK
D NOVO_08195 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:rbt02024]
D NOVO_02485 kdpE; KDP operon transcriptional regulatory protein KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D NOVO_01715 ptlH_1; Pertussis toxin liberation protein H K20527 trbB; type IV secretion system protein TrbB [EC:7.4.2.8]
D NOVO_01720 conjugal transfer protein TrbC K20528 trbC; type IV secretion system protein TrbC
D NOVO_01725 conjugal transfer protein TrbD K20529 trbD; type IV secretion system protein TrbD
D NOVO_01730 virB4_1; Type IV secretion system protein virB4 K20530 trbE; type IV secretion system protein TrbE [EC:7.4.2.8]
D NOVO_01750 conjugal transfer protein TrbL K07344 trbL; type IV secretion system protein TrbL
D NOVO_01755 conjugal transfer protein TrbF K20531 trbF; type IV secretion system protein TrbF
D NOVO_01760 conjugal transfer protein TrbG K20532 trbG; type IV secretion system protein TrbG
D NOVO_01765 Type IV secretion system protein virB10 K20533 trbI; type IV secretion system protein TrbI
D NOVO_03365 ribA; GTP cyclohydrolase-2 K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D NOVO_08010 ribD; Riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D NOVO_03435 yidC; Oxa1Ec K03217 yidC; YidC/Oxa1 family membrane protein insertase
D NOVO_02665 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D NOVO_02280 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D NOVO_06205 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D NOVO_08170 hypothetical protein K03210 yajC; preprotein translocase subunit YajC
D NOVO_08340 secA_2; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D NOVO_01940 ftsY; Cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D NOVO_04520 secB; Protein-export protein SecB K03071 secB; preprotein translocase subunit SecB
D NOVO_07635 ffh; p48 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:rbt02030]
D NOVO_04505 aer; Aerotaxis receptor K03406 mcp; methyl-accepting chemotaxis protein
D NOVO_05215 bdlA; Chemotaxis regulator BdlA K03406 mcp; methyl-accepting chemotaxis protein
D NOVO_06525 cheA; Chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D NOVO_06520 purine-binding chemotaxis protein K03408 cheW; purine-binding chemotaxis protein CheW
D NOVO_04545 cheY_1; Chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D NOVO_06515 cheY_2; Chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D NOVO_06510 cheB; Chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D NOVO_06505 cheR; Chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D NOVO_05275 fliG; Flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D NOVO_01450 fliM; Flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D NOVO_05265 fliN; Flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D NOVO_06065 motA; Chemotaxis protein MotA K02556 motA; chemotaxis protein MotA
D NOVO_06060 motB; Chemotaxis protein MotB K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:rbt02040]
D NOVO_02550 flagellar hook-basal body protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D NOVO_05280 fliF; Flagellar M-ring protein K02409 fliF; flagellar M-ring protein FliF
D NOVO_05275 fliG; Flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D NOVO_05270 flagellar assembly protein H K02411 fliH; flagellar assembly protein FliH
D NOVO_07225 fliI; Flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D NOVO_01455 fliL; Flagellar FliL protein K02415 fliL; flagellar protein FliL
D NOVO_01450 fliM; Flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D NOVO_05265 fliN; Flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D NOVO_08995 flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D NOVO_09000 fliP; Flagellar biosynthetic protein fliP precursor K02419 fliP; flagellar biosynthesis protein FliP
D NOVO_02555 fliQ; Flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D NOVO_07575 flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D NOVO_01015 flhA; Flagellar biosynthesis protein flhA K02400 flhA; flagellar biosynthesis protein FlhA
D NOVO_08670 flhB; Flagellar biosynthetic protein flhB K02401 flhB; flagellar biosynthesis protein FlhB
D NOVO_04040 flagellar basal body P-ring biosynthesis protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D NOVO_02545 flgC; Putative proximal rod protein K02388 flgC; flagellar basal-body rod protein FlgC
D NOVO_02310 flgD; Basal-body rod modification protein flgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D NOVO_02305 flgE; Flagellar hook protein flgE K02390 flgE; flagellar hook protein FlgE
D NOVO_05070 flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D NOVO_01460 flgG_1; Distal rod protein K02391 flgF; flagellar basal-body rod protein FlgF
D NOVO_01465 flgG_2; Distal rod protein K02392 flgG; flagellar basal-body rod protein FlgG
D NOVO_04045 flgH; Basal body L-ring protein K02393 flgH; flagellar L-ring protein FlgH
D NOVO_08235 flgI; Basal body P-ring protein K02394 flgI; flagellar P-ring protein FlgI
D NOVO_08220 flgK; Flagellar hook-associated protein 1 K02396 flgK; flagellar hook-associated protein 1
D NOVO_08215 flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D NOVO_07435 fliC; A-type flagellin K02406 fliC; flagellin
D NOVO_00610 fliD; Flagellar cap protein K02407 fliD; flagellar hook-associated protein 2
D NOVO_00605 flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS
D NOVO_06065 motA; Chemotaxis protein MotA K02556 motA; chemotaxis protein MotA
D NOVO_06060 motB; Chemotaxis protein MotB K02557 motB; chemotaxis protein MotB
D NOVO_06555 sigA; Sigma-70 K03086 rpoD; RNA polymerase primary sigma factor
D NOVO_02420 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D NOVO_05890 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagosome formation
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04981 Folate transport and metabolism [PATH:rbt04981]
D NOVO_03345 hypothetical protein K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
D NOVO_02170 glyA2; Pyridoxal-phosphate-dependent serine hydroxymethyltransferase 2 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 04980 Cobalamin transport and metabolism
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
C 04382 Cornified envelope formation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:rbt01501]
D NOVO_01560 ampG_1; AmpG K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D NOVO_04455 ampG_2; AmpG K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D NOVO_02265 glycoside hydrolase family protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D NOVO_06805 ybbD_2; glycoside hydrolase family protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D NOVO_05405 bepD; Efflux pump periplasmic linker BepD precursor K03585 acrA; membrane fusion protein, multidrug efflux system
D NOVO_07940 bepC; Outer membrane efflux protein BepC precursor K12340 tolC; outer membrane protein
D NOVO_03655 pbpD; Penicillin-binding protein 4 precursor K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D NOVO_05135 mrcA; Penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D NOVO_08245 ftsI; Peptidoglycan synthase FtsI precursor K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D NOVO_00070 penA; Penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D NOVO_01400 bla; Beta-lactamase OXA-1 precursor K17838 oxa; beta-lactamase class D [EC:3.5.2.6]
C 01502 Vancomycin resistance [PATH:rbt01502]
D NOVO_05530 vanX; D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D NOVO_03175 ddlB; D-alanine--D-alanine ligase B K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D NOVO_01960 dadX; Alanine racemase, catabolic K01775 alr; alanine racemase [EC:5.1.1.1]
D NOVO_02445 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D NOVO_02440 mraY; Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D NOVO_00260 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:rbt01503]
D NOVO_02250 amiC; N-acetylmuramoyl-L-alanine amidase AmiC precursor K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D NOVO_05595 mucD; putative periplasmic serine endoprotease DegP-like precursor K04771 degP; serine protease Do [EC:3.4.21.107]
D NOVO_05405 bepD; Efflux pump periplasmic linker BepD precursor K03585 acrA; membrane fusion protein, multidrug efflux system
D NOVO_07940 bepC; Outer membrane efflux protein BepC precursor K12340 tolC; outer membrane protein
D NOVO_03030 lpxA; Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:rbt01000]
C 01001 Protein kinases [BR:rbt01001]
D NOVO_05970 phoR; Phosphate regulon sensor protein phoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D NOVO_02715 envZ; Osmolarity sensor protein EnvZ K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D NOVO_01535 yycG_2; Sensor histidine kinase YycG K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D NOVO_07815 walK; Sensor protein kinase walK K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D NOVO_06525 cheA; Chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:rbt01009]
D NOVO_06295 htpG; High temperature protein G K04079 HSP90A; molecular chaperone HtpG
C 01002 Peptidases and inhibitors [BR:rbt01002]
D NOVO_03140 lspA; Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D NOVO_04170 guaA; GMP synthase [glutamine-hydrolyzing] K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D NOVO_01595 Putative glutamine amidotransferasec K07010 K07010; putative glutamine amidotransferase
D NOVO_05630 purF; Amidophosphoribosyltransferase precursor K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D NOVO_05905 glmS; Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D NOVO_05530 vanX; D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D NOVO_00890 pepA; Cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D NOVO_05390 dapE; Succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D NOVO_02745 map; Methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D NOVO_00940 putative peptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D NOVO_08500 Thermostable carboxypeptidase 1 K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19]
D NOVO_05040 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D NOVO_02190 mmpA; Metalloprotease mmpA K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D NOVO_05595 mucD; putative periplasmic serine endoprotease DegP-like precursor K04771 degP; serine protease Do [EC:3.4.21.107]
D NOVO_02590 ptrB; Protease 2 K01354 ptrB; oligopeptidase B [EC:3.4.21.83]
D NOVO_06920 dacA; D-alanyl-D-alanine carboxypeptidase dacA precursor K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D NOVO_06925 dacD; D-alanyl-D-alanine carboxypeptidase dacD precursor K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D NOVO_01935 dacB; D-alanyl-D-alanine carboxypeptidase dacB precursor K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D NOVO_07005 clpP; ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D NOVO_07075 lon; Lon protease K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D NOVO_02455 lepB; Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D NOVO_03930 ctpB; Carboxy-terminal processing protease CtpB precursor K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D NOVO_02470 sppA; Protease 4 K04773 sppA; protease IV [EC:3.4.21.-]
D NOVO_06960 Murein tetrapeptide carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D NOVO_00475 phage prohead protease, HK97 family K06904 GP4; Escherichia/Staphylococcus phage prohead protease
D NOVO_04385 hslV; ATP-dependent protease subunit HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D NOVO_05930 pmbA; modulator protein K03592 pmbA; PmbA protein
D NOVO_05175 tldD; protease TldD K03568 tldD; TldD protein
D NOVO_05590 hflC; Modulator of FtsH protease HflC K04087 hflC; modulator of FtsH protease HflC
D NOVO_05585 hflK; Modulator of FtsH protease HflK K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases [BR:rbt01003]
D NOVO_03655 pbpD; Penicillin-binding protein 4 precursor K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D NOVO_05135 mrcA; Penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D NOVO_00265 ftsW; Cell division protein FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D NOVO_01655 mrdB; Rod shape-determining protein RodA K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:rbt01005]
D NOVO_03030 lpxA; Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D NOVO_08060 lpxB; Lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D NOVO_00665 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D NOVO_03040 lpxD; UDP-3-O-acylglucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D NOVO_05565 PAP2 (acid phosphatase) superfamily protein K12978 lpxF; lipid A 4'-phosphatase [EC:3.1.3.-]
D NOVO_03025 hypothetical protein K09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D NOVO_02790 lpxK; Tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D NOVO_03815 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D NOVO_07345 waaA; 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D NOVO_06450 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D NOVO_08480 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D NOVO_03865 kdsD; Arabinose 5-phosphate isomerase KdsD K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:rbt01011]
D NOVO_00750 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D NOVO_08250 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D NOVO_00205 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D NOVO_02775 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D NOVO_00075 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D NOVO_03175 ddlB; D-alanine--D-alanine ligase B K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D NOVO_01960 dadX; Alanine racemase, catabolic K01775 alr; alanine racemase [EC:5.1.1.1]
D NOVO_06960 Murein tetrapeptide carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D NOVO_02440 mraY; Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D NOVO_00260 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D NOVO_06905 murJ; multidrug transporter MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D NOVO_03655 pbpD; Penicillin-binding protein 4 precursor K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D NOVO_05135 mrcA; Penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D NOVO_08245 ftsI; Peptidoglycan synthase FtsI precursor K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D NOVO_00070 penA; Penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D NOVO_06920 dacA; D-alanyl-D-alanine carboxypeptidase dacA precursor K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D NOVO_06925 dacD; D-alanyl-D-alanine carboxypeptidase dacD precursor K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D NOVO_01935 dacB; D-alanyl-D-alanine carboxypeptidase dacB precursor K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D NOVO_00265 ftsW; Cell division protein FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D NOVO_01655 mrdB; Rod shape-determining protein RodA K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D NOVO_05530 vanX; D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D NOVO_08295 slt; Soluble lytic murein transglycosylase precursor K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D NOVO_04530 mltA; Membrane-bound lytic murein transglycosylase A precursor K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29]
D NOVO_03620 yceG; aminodeoxychorismate lyase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D NOVO_05880 RlpA-like protein precursor K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D NOVO_02250 amiC; N-acetylmuramoyl-L-alanine amidase AmiC precursor K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D NOVO_07355 amiD; N-acetylmuramoyl-L-alanine amidase AmiD precursor K11066 amiD; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:rbt01004]
D NOVO_02490 fabD; Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D NOVO_04365 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase 3 K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D NOVO_03625 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D NOVO_03635 fabG_1; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D NOVO_03035 fabZ; (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D NOVO_07570 fabI; Enoyl-[acyl-carrier-protein] reductase [NADH] FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D NOVO_07060 Nitronate monooxygenase K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D NOVO_04370 plsX; Phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D NOVO_03615 plsY; G3P acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D NOVO_01020 acylglycerophosphoethanolamine acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:rbt01006]
D NOVO_01640 Farnesyl diphosphate synthase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D NOVO_03975 ispB; Octaprenyl-diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D NOVO_06890 uppS; Undecaprenyl pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D NOVO_03695 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D NOVO_04895 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D NOVO_08035 ctaB; Protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:rbt01007]
D NOVO_02950 lysS; Lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D NOVO_03050 gltX; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D NOVO_07565 gltX1; Glutamate--tRNA ligase 1 K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D NOVO_04800 tyrS; Tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D NOVO_04650 trpS; Tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D NOVO_06785 cysS; Cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D NOVO_01360 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D NOVO_07695 argS; Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D NOVO_06425 metG; Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D NOVO_03520 ileS; Isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D NOVO_02880 valS; Valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D NOVO_04020 leuS; Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D NOVO_00630 aspS; Aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D NOVO_08690 hisS; Histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D NOVO_06870 glyQ; Glycine--tRNA ligase alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D NOVO_06875 glyS; Glycine--tRNA ligase beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D NOVO_01505 serS; Serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D NOVO_01925 proS; Proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D NOVO_06850 thrS; Threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D NOVO_05675 alaS; Alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D NOVO_02245 pheS; Phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D NOVO_02240 pheT; Phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D NOVO_04030 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D NOVO_01090 hisC2; Histidinol-phosphate aminotransferase 2 K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D NOVO_03265 hemA; 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37]
D NOVO_01545 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D NOVO_05260 astC; Succinylornithine transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D NOVO_00220 bioA; Adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D NOVO_00800 dat; D-alanine aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D NOVO_08485 ilvE; Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D NOVO_09405 arnB_2; UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase K13010 per; perosamine synthetase [EC:2.6.1.102]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:rbt00194]
D NOVO_03060 atpC; F-ATPase epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D NOVO_03065 atpD; ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D NOVO_02885 atpG_1; F-ATPase gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D NOVO_02890 atpA; ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D NOVO_02895 atpH; F-type ATPase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D NOVO_02910 atpF; F-type ATPase subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D NOVO_02915 atpG_2; F-type ATPase subunit b' K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D NOVO_02920 F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D NOVO_02925 atpB; F-ATPase subunit 6 K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:rbt03000]
D NOVO_02600 ada; Regulatory protein of adaptative response K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D NOVO_00425 hypothetical protein K11923 cueR; MerR family transcriptional regulator, copper efflux regulator
D NOVO_02730 fur; Ferric uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D NOVO_05080 iscR; HTH-type transcriptional regulator iscR K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D NOVO_08140 birA; Bifunctional protein BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D NOVO_08300 putA; Bifunctional protein putA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D NOVO_06615 bolA; BolA family transcriptional regulator K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D NOVO_04280 parB; Chromosome-partitioning protein parB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D NOVO_09455 parB; Plasmid partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D NOVO_06570 CarD-like/TRCF domain protein K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D NOVO_08600 tenA; Thiaminase-2 K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D NOVO_07625 hypothetical protein K07735 algH; putative transcriptional regulator
D NOVO_07670 dksA; DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D NOVO_00050 mraZ; cell division protein MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:rbt03021]
D NOVO_06225 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D NOVO_02635 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D NOVO_02630 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D NOVO_00615 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D NOVO_06555 sigA; Sigma-70 K03086 rpoD; RNA polymerase primary sigma factor
D NOVO_08685 rpoH; RNA polymerase sigma-32 factor K03089 rpoH; RNA polymerase sigma-32 factor
D NOVO_02420 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D NOVO_01350 nusA; N utilization substance protein A K02600 nusA; transcription termination/antitermination protein NusA
D NOVO_02810 nusB; N utilization substance protein B K03625 nusB; transcription antitermination protein NusB
D NOVO_02660 nusG; Transcription antitermination protein nusG K02601 nusG; transcription termination/antitermination protein NusG
D NOVO_07670 dksA; DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D NOVO_08900 greA; Transcript cleavage factor greA K03624 greA; transcription elongation factor GreA
D NOVO_04590 rho; Transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:rbt03019]
D NOVO_02255 rne; Ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D NOVO_02450 rnc; Ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3]
D NOVO_08150 Ribonuclease J 1 K12574 rnj; ribonuclease J [EC:3.1.-.-]
D NOVO_05890 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D NOVO_02155 pnp; Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D NOVO_04590 rho; Transcription termination factor Rho K03628 rho; transcription termination factor Rho
D NOVO_07960 dnaK; Heat shock protein 70 K04043 dnaK; molecular chaperone DnaK
D NOVO_08195 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D NOVO_07920 cca; CCA-adding enzyme K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D NOVO_03920 rppH; RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D NOVO_02535 hypothetical protein K03563 csrA; carbon storage regulator
C 03041 Spliceosome
C 03011 Ribosome [BR:rbt03011]
D NOVO_01820 rpsA; Ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D NOVO_03170 rpsB; Ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D NOVO_06135 rpsC; Ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D NOVO_07250 rpsD; Ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D NOVO_06190 rpsE; Ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D NOVO_04975 rpsF; Ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D NOVO_02685 rpsG; Ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D NOVO_06175 rpsH; Ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D NOVO_04165 rpsI; Ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D NOVO_06100 rpsJ; Ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D NOVO_06220 rpsK; Ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D NOVO_02690 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D NOVO_06215 rpsM; Ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D NOVO_06170 rpsN; Ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D NOVO_02160 rpsO; Ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D NOVO_02855 rpsP; Ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D NOVO_06150 rpsQ; Ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D NOVO_04980 rpsR; Ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D NOVO_06125 rpsS; Ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D NOVO_08160 rpsT; Ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D NOVO_02940 rpsU; Ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D NOVO_02650 rplA; Ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D NOVO_06120 rplB; Ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D NOVO_06105 rplC; Ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D NOVO_06110 rplD; Ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D NOVO_06165 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D NOVO_06180 rplF; Ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D NOVO_04985 rplI; Ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D NOVO_02645 rplJ; Ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D NOVO_02655 rplK; Ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D NOVO_02640 rplL; Ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D NOVO_04160 rplM; Ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D NOVO_06155 rplN; Ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D NOVO_06200 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D NOVO_06140 rplP; Ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D NOVO_06230 rplQ; Ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D NOVO_06185 rplR; Ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D NOVO_01430 rplS; Ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D NOVO_02575 rplT; Ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D NOVO_03600 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D NOVO_06130 rplV; Ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D NOVO_06115 rplW; Ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D NOVO_06160 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D NOVO_03605 rpmA; Ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D NOVO_04625 rpmB; Ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D NOVO_06145 rpmC; Ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D NOVO_06195 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D NOVO_04630 rpmE; Ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D NOVO_04375 rpmF; Ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D NOVO_02850 rpmG; Ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D NOVO_02580 rpmI; Ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D NOVO_05900 rpmJ2; 50S ribosomal protein L36 2 K02919 RP-L36; large subunit ribosomal protein L36
D NOVO_07240 rplY; Ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D NOVO_03225 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D NOVO_06390 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D NOVO_06395 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 03009 Ribosome biogenesis [BR:rbt03009]
D NOVO_02450 rnc; Ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3]
D NOVO_07190 era; GTPase Era K03595 era; GTPase
D NOVO_03670 cgtA; GTP-binding protein Obg K03979 obgE; GTPase [EC:3.6.5.-]
D NOVO_07670 dksA; DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D NOVO_01350 nusA; N utilization substance protein A K02600 nusA; transcription termination/antitermination protein NusA
D NOVO_02810 nusB; N utilization substance protein B K03625 nusB; transcription antitermination protein NusB
D NOVO_02660 nusG; Transcription antitermination protein nusG K02601 nusG; transcription termination/antitermination protein NusG
D NOVO_03130 rsmA; Ribosomal RNA small subunit methyltransferase A K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D NOVO_01585 rsmD; Ribosomal RNA small subunit methyltransferase D K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D NOVO_06045 rsmE; Ribosomal RNA small subunit methyltransferase E K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D NOVO_04290 rsmG; Ribosomal RNA small subunit methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D NOVO_00060 rsmH; Ribosomal RNA small subunit methyltransferase H K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D NOVO_04210 rsmI; Ribosomal RNA small subunit methyltransferase I K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D NOVO_01045 tlyA; 16S/23S rRNA (cytidine-2'-O)-methyltransferase TlyA K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D NOVO_06080 Putative TrmH family tRNA/rRNA methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D NOVO_04755 rlmE; Ribosomal RNA large subunit methyltransferase E K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D NOVO_08630 rlmH; Ribosomal RNA large subunit methyltransferase H K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D NOVO_08565 rlmN; Ribosomal RNA large subunit methyltransferase N K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D NOVO_01870 rlmCD; 23S rRNA (uracil-C(5))-methyltransferase RlmCD K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D NOVO_01590 rluB; Ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D NOVO_04100 rluC; Ribosomal large subunit pseudouridine synthase C K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D NOVO_07130 rluD; Ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D NOVO_03820 rimM; Ribosome maturation factor rimM K02860 rimM; 16S rRNA processing protein RimM
D NOVO_04855 prmA; Ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D NOVO_02255 rne; Ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D NOVO_06400 yrrK; Putative Holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D NOVO_06410 der; GTP-binding protein EngA K03977 engA; GTPase
D NOVO_08305 hflX; GTP-binding protein HflX K03665 hflX; GTPase
D NOVO_02150 yciO; Putative translation factor (SUA5) K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D NOVO_03350 rsh; GTP pyrophosphokinase rsh K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D NOVO_01340 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D NOVO_01355 rimP; Ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP
D NOVO_03260 hypothetical protein K09710 ybeB; ribosome-associated protein
D NOVO_03410 putative rRNA maturation factor K07042 ybeY; probable rRNA maturation factor
D NOVO_02430 engD; GTP-dependent nucleic acid-binding protein engD K06942 ychF; ribosome-binding ATPase
C 03016 Transfer RNA biogenesis [BR:rbt03016]
D NOVO_03050 gltX; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D NOVO_07565 gltX1; Glutamate--tRNA ligase 1 K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D NOVO_01925 proS; Proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D NOVO_03520 ileS; Isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D NOVO_04020 leuS; Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D NOVO_06425 metG; Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D NOVO_01360 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D NOVO_07695 argS; Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D NOVO_00630 aspS; Aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D NOVO_05675 alaS; Alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D NOVO_06850 thrS; Threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D NOVO_01505 serS; Serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D NOVO_06785 cysS; Cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D NOVO_02880 valS; Valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D NOVO_08690 hisS; Histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D NOVO_02245 pheS; Phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D NOVO_02240 pheT; Phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D NOVO_04800 tyrS; Tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D NOVO_04650 trpS; Tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D NOVO_04995 HIT-like protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D NOVO_02725 miaB_2; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB K06168 CDK5RAP1; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D NOVO_01945 miaB_1; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB K15865 CDKAL1; threonylcarbamoyladenosine tRNA methylthiotransferase [EC:2.8.4.5]
D NOVO_08285 trmB; tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D NOVO_05000 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D NOVO_02165 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D NOVO_05085 nifS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D NOVO_05090 iscS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D NOVO_02150 yciO; Putative translation factor (SUA5) K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D NOVO_03695 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D NOVO_05365 mnmE; tRNA modification GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D NOVO_04295 mnmG; Glucose-inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D NOVO_06605 cysQ; 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D NOVO_03445 ribonuclease P K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D NOVO_00295 bacterial RNase P K01978 rnpB; RNase P catalytic RNA component
D NOVO_06440 rph; Ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D NOVO_02375 rnd; Ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5]
D NOVO_03870 ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5]
D NOVO_07105 putative ABC transporter ATP-binding protein K06020 ettA; energy-dependent translational throttle protein EttA
D NOVO_02950 lysS; Lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D NOVO_06870 glyQ; Glycine--tRNA ligase alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D NOVO_06875 glyS; Glycine--tRNA ligase beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D NOVO_05835 tadA; tRNA-specific adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D NOVO_05550 dus; putative tRNA-dihydrouridine synthase K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D NOVO_06790 trmJ; tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-]
D NOVO_07955 trmD; tRNA (guanine-N(1)-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D NOVO_03970 mnmA; tRNA-specific 2-thiouridylase mnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D NOVO_05100 iscA; Iron-sulfur cluster assembly protein K13628 iscA; iron-sulfur cluster assembly protein
D NOVO_05060 putative global regulator K06980 ygfZ; tRNA-modifying protein YgfZ
D NOVO_04675 tgt; Queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D NOVO_05035 tilS; tRNA(Ile)-lysidine synthase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D NOVO_05775 hypothetical protein K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D NOVO_03700 gcp; t(6)A37 threonylcarbamoyladenosine biosynthesis protein K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D NOVO_04500 hypothetical protein K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D NOVO_02155 pnp; Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:rbt03012]
D NOVO_01345 infB; Translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D NOVO_06250 infC; Translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D NOVO_03165 tsf; Elongation factor Ts K02357 tsf; elongation factor Ts
D NOVO_02675 tufA_1; Elongation factor Tu K02358 tuf; elongation factor Tu
D NOVO_06095 tufA_2; Elongation factor Tu K02358 tuf; elongation factor Tu
D NOVO_02680 fusA; Vegetative protein 19 K02355 fusA; elongation factor G
D NOVO_07675 prfA; Peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D NOVO_03155 frr; Vegetative protein 12B K02838 frr; ribosome recycling factor
D NOVO_03530 prmC; Release factor glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D NOVO_07245 pth; Peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D NOVO_04270 infA; Translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D NOVO_02505 efp; Elongation factor P K02356 efp; elongation factor P
D NOVO_04870 prfB; Peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
C 03110 Chaperones and folding catalysts [BR:rbt03110]
D NOVO_05560 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D NOVO_05820 clpB; Heat shock protein F84.1 K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D NOVO_07000 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D NOVO_04390 hslU; Unfoldase HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D NOVO_06295 htpG; High temperature protein G K04079 HSP90A; molecular chaperone HtpG
D NOVO_07960 dnaK; Heat shock protein 70 K04043 dnaK; molecular chaperone DnaK
D NOVO_05110 hscA; Hsc66 K04044 hscA; molecular chaperone HscA
D NOVO_08195 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D NOVO_07965 dnaJ; Chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D NOVO_05105 hscB; Co-chaperone protein hscB K04082 hscB; molecular chaperone HscB
D NOVO_00755 hslO; Heat shock protein 33 K04083 hslO; molecular chaperone Hsp33
D NOVO_06445 grpE; HSP-70 cofactor K03687 GRPE; molecular chaperone GrpE
D NOVO_01830 ibpA; 16 kDa heat shock protein A K04080 ibpA; molecular chaperone IbpA
D NOVO_08200 groES; molecular chaperone GroES K04078 groES; chaperonin GroES
D NOVO_05595 mucD; putative periplasmic serine endoprotease DegP-like precursor K04771 degP; serine protease Do [EC:3.4.21.107]
D NOVO_05040 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D NOVO_02925 atpB; F-ATPase subunit 6 K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D NOVO_04520 secB; Protein-export protein SecB K03071 secB; preprotein translocase subunit SecB
D NOVO_03355 hypothetical protein K09796 pccA; periplasmic copper chaperone A
D NOVO_02290 ppiD; Peptidyl-prolyl cis-trans isomerase D K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D NOVO_01195 trxA; Thioredoxin K03671 TXN; thioredoxin
D NOVO_04540 grxC; Glutaredoxin-3 K03676 grxC; glutaredoxin 3
D NOVO_06975 grxD; Monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin
D NOVO_04920 dsbE; Cytochrome c biogenesis protein CcmG K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
C 04131 Membrane trafficking [BR:rbt04131]
D NOVO_03900 ndk; Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D NOVO_03745 gap; Glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D NOVO_06295 htpG; High temperature protein G K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system
C 03051 Proteasome [BR:rbt03051]
D NOVO_06295 htpG; High temperature protein G K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:rbt03032]
D NOVO_04645 rnhA; Ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D NOVO_07080 hupB; DNA-binding protein HRm K03530 hupB; DNA-binding protein HU-beta
D NOVO_08270 dnaA; Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D NOVO_01955 dnaC; Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D NOVO_06550 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D NOVO_07395 ssb; Helix-destabilizing protein K03111 ssb; single-strand DNA-binding protein
D NOVO_02200 dnaE1; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D NOVO_08275 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D NOVO_00885 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D NOVO_05525 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D NOVO_03565 dnaX_1; DNA polymerase III subunit tau K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D NOVO_04560 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D NOVO_06760 dnaX_2; DNA polymerase III subunit tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D NOVO_08880 rnhB; Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D NOVO_08680 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D NOVO_02610 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D NOVO_04085 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D NOVO_01075 topA; DNA topoisomerase 1 K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:rbt03036]
D NOVO_02450 rnc; Ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3]
D NOVO_07080 hupB; DNA-binding protein HRm K03530 hupB; DNA-binding protein HU-beta
D NOVO_08270 dnaA; Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D NOVO_08605 mrgA; Metalloregulation DNA-binding stress protein K04047 dps; starvation-inducible DNA-binding protein
D NOVO_03185 ftsA; Cell division protein FtsA K03590 ftsA; cell division protein FtsA
D NOVO_00070 penA; Penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D NOVO_02405 ftsK; DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D NOVO_00065 putative secreted (periplasmic) protein K03586 ftsL; cell division protein FtsL
D NOVO_03180 Cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ
D NOVO_00265 ftsW; Cell division protein FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D NOVO_04175 ftsZ; Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D NOVO_06855 hypothetical protein K09888 zapA; cell division protein ZapA
D NOVO_02250 amiC; N-acetylmuramoyl-L-alanine amidase AmiC precursor K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D NOVO_05405 bepD; Efflux pump periplasmic linker BepD precursor K03585 acrA; membrane fusion protein, multidrug efflux system
D NOVO_00775 mreB; Rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D NOVO_00780 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D NOVO_08240 hypothetical protein K03571 mreD; rod shape-determining protein MreD
D NOVO_01655 mrdB; Rod shape-determining protein RodA K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D NOVO_04010 plasmid-partitioning protein RepA K03496 parA; chromosome partitioning protein
D NOVO_04285 soj; Sporulation initiation inhibitor protein soj K03496 parA; chromosome partitioning protein
D NOVO_08610 plasmid partitioning protein RepA K03496 parA; chromosome partitioning protein
D NOVO_09105 Plasmid partitioning protein ParA K03496 parA; chromosome partitioning protein
D NOVO_09460 parA; Plasmid partitioning protein ParA K03496 parA; chromosome partitioning protein
D NOVO_04280 parB; Chromosome-partitioning protein parB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D NOVO_09455 parB; Plasmid partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D NOVO_04295 mnmG; Glucose-inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D NOVO_04290 rsmG; Ribosomal RNA small subunit methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D NOVO_01085 xerD_1; Tyrosine recombinase XerD K03733 xerC; integrase/recombinase XerC
D NOVO_03685 xerD_2; Tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D NOVO_05580 antiporter inner membrane protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D NOVO_06075 engB; putative GTP-binding protein EngB K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:rbt03400]
D NOVO_04110 nth; Endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D NOVO_07175 dut; Deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D NOVO_02600 ada; Regulatory protein of adaptative response K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D NOVO_07135 uracil-DNA glycosylase, family 4 K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D NOVO_05155 tag; DNA-3-methyladenine glycosylase 1 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D NOVO_07580 mutM; Formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D NOVO_00525 xthA_1; Exodeoxyribonuclease III K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2]
D NOVO_01605 xthA_2; Exodeoxyribonuclease III K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2]
D NOVO_04150 recJ; Single-stranded-DNA-specific exonuclease recJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D NOVO_08680 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D NOVO_07390 uvrA; Excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D NOVO_04055 uvrB; UvrB K03702 uvrB; excinuclease ABC subunit B
D NOVO_00740 uvrC; Excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D NOVO_05910 pcrA; ATP-dependent DNA helicase pcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D NOVO_02635 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D NOVO_02630 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D NOVO_06225 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D NOVO_00615 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D NOVO_07065 mfd; Transcription-repair-coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D NOVO_00185 mutS; DNA mismatch repair protein mutS K03555 mutS; DNA mismatch repair protein MutS
D NOVO_02475 mutL; DNA mismatch repair protein mutL K03572 mutL; DNA mismatch repair protein MutL
D NOVO_00730 xseA; Exodeoxyribonuclease 7 large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D NOVO_04805 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D NOVO_02200 dnaE1; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D NOVO_08275 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D NOVO_00885 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D NOVO_05525 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D NOVO_03565 dnaX_1; DNA polymerase III subunit tau K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D NOVO_04560 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D NOVO_06760 dnaX_2; DNA polymerase III subunit tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D NOVO_07395 ssb; Helix-destabilizing protein K03111 ssb; single-strand DNA-binding protein
D NOVO_07385 recA; Recombinase A K03553 recA; recombination protein RecA
D NOVO_04250 ruvA; Holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D NOVO_04245 ruvB; Holliday junction ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D NOVO_04255 ruvC; Crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D NOVO_08750 priA; Primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D NOVO_08625 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D NOVO_04080 recF; DNA replication and repair protein recF K03629 recF; DNA replication and repair protein RecF
D NOVO_06050 recG; ATP-dependent DNA helicase recG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D NOVO_06610 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D NOVO_06750 recR; Recombination protein RecR K06187 recR; recombination protein RecR
D NOVO_06995 recN; Recombination protein N K03631 recN; DNA repair protein RecN (Recombination protein N)
D NOVO_02780 addA; ATP-dependent helicase/nuclease subunit A K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
D NOVO_07315 Inactivated superfamily I helicase K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
D NOVO_02610 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D NOVO_04085 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D NOVO_01075 topA; DNA topoisomerase 1 K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D NOVO_07080 hupB; DNA-binding protein HRm K03530 hupB; DNA-binding protein HU-beta
D NOVO_02335 nrdE; Ribonucleoside-diphosphate reductase 2 subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D NOVO_02330 nrdB; Ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:rbt03029]
D NOVO_01525 petB; Cytochrome b K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D NOVO_01345 infB; Translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D NOVO_06250 infC; Translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D NOVO_03165 tsf; Elongation factor Ts K02357 tsf; elongation factor Ts
D NOVO_02675 tufA_1; Elongation factor Tu K02358 tuf; elongation factor Tu
D NOVO_06095 tufA_2; Elongation factor Tu K02358 tuf; elongation factor Tu
D NOVO_02680 fusA; Vegetative protein 19 K02355 fusA; elongation factor G
D NOVO_07190 era; GTPase Era K03595 era; GTPase
D NOVO_04800 tyrS; Tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D NOVO_04020 leuS; Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D NOVO_00630 aspS; Aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D NOVO_01360 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D NOVO_07695 argS; Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D NOVO_05200 gatA; Glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D NOVO_05205 gatB; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D NOVO_05195 gatC; Glutamyl-tRNA(Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D NOVO_07395 ssb; Helix-destabilizing protein K03111 ssb; single-strand DNA-binding protein
D NOVO_02185 Outer membrane protein omp85 precursor K07277 SAM50; outer membrane protein insertion porin family
D NOVO_07960 dnaK; Heat shock protein 70 K04043 dnaK; molecular chaperone DnaK
D NOVO_06445 grpE; HSP-70 cofactor K03687 GRPE; molecular chaperone GrpE
D NOVO_08195 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D NOVO_08200 groES; molecular chaperone GroES K04078 groES; chaperonin GroES
D NOVO_07965 dnaJ; Chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D NOVO_05085 nifS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D NOVO_05090 iscS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D NOVO_05105 hscB; Co-chaperone protein hscB K04082 hscB; molecular chaperone HscB
D NOVO_06975 grxD; Monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin
D NOVO_06660 biotin biosynthesis protein BioC K18162 NDUFAF5; NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 5 [EC:2.1.1.-]
D NOVO_03090 squalene synthase HpnD K18163 NDUFAF6; NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 6
D NOVO_05580 antiporter inner membrane protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D NOVO_08035 ctaB; Protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D NOVO_08040 ctaG; Cytochrome c oxidase assembly protein CtaG K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D NOVO_03270 ctaA; Heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9]
D NOVO_03435 yidC; Oxa1Ec K03217 yidC; YidC/Oxa1 family membrane protein insertase
D NOVO_06015 hypothetical protein K14998 SURF1; surfeit locus 1 family protein
D NOVO_01965 SCO1/SenC K07152 SCO1; protein SCO1
D NOVO_06295 htpG; High temperature protein G K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:rbt02000]
D NOVO_05935 msbA; Lipid A export ATP-binding/permease protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D NOVO_08805 Putative multidrug export ATP-binding/permease protein K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
D NOVO_03645 bmrA; Multidrug resistance ABC transporter ATP-binding/permease protein BmrA K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D NOVO_05180 Putative multidrug export ATP-binding/permease protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D NOVO_04955 prsD; Type I secretion system ATP-binding protein PrsD K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D NOVO_04070 putative ABC transporter ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein
D NOVO_03475 sbp; Sulfate-binding protein precursor K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D NOVO_03480 cysW_1; Sulfate transport system permease protein CysW K02046 cysU; sulfate/thiosulfate transport system permease protein
D NOVO_03485 cysW_2; Sulfate transport system permease protein CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D NOVO_03490 cysA; Sulfate/thiosulfate import ATP-binding protein CysA K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D NOVO_04635 mlaD; putative phospholipid ABC transporter-binding protein mlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D NOVO_03235 mlaE; putative phospholipid ABC transporter permease protein mlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D NOVO_03240 putative ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D NOVO_02980 mlaC; putative phospholipid-binding protein mlaC precursor K07323 mlaC; phospholipid transport system substrate-binding protein
D NOVO_01500 sphX; SphX K02040 pstS; phosphate transport system substrate-binding protein
D NOVO_06950 pstC; Phosphate transport system permease protein pstC K02037 pstC; phosphate transport system permease protein
D NOVO_06955 pstA; Phosphate transport system permease protein pstA K02038 pstA; phosphate transport system permease protein
D NOVO_06965 pstB; Phosphate import ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D NOVO_03340 artP; Arginine-binding extracellular protein ArtP precursor K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein
D NOVO_03335 artQ; Arginine transport system permease protein ArtQ K17077 artQ; arginine/lysine/histidine transport system permease protein
D NOVO_03330 artM; Arginine transport ATP-binding protein ArtM K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D NOVO_08895 znuA; High-affinity zinc uptake system protein znuA precursor K09815 znuA; zinc transport system substrate-binding protein
D NOVO_01550 znuB; High-affinity zinc uptake system membrane protein znuB K09816 znuB; zinc transport system permease protein
D NOVO_06405 znuC; Zinc import ATP-binding protein ZnuC K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D NOVO_09435 ABC-2 type sugar transporter K09690 wzm; homopolymeric O-antigen transport system permease protein
D NOVO_04235 lipopolysaccharide ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein
D NOVO_05535 lptG; Lipopolysaccharide export system permease protein lptG K11720 lptG; lipopolysaccharide export system permease protein
D NOVO_03850 lptB; Lipopolysaccharide export system ATP-binding protein LptB K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D NOVO_01845 lolC; Lipoprotein-releasing system transmembrane protein lolC K09808 lolC_E_F; lipoprotein-releasing system permease protein
D NOVO_01850 lolD; Lipoprotein-releasing system ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D NOVO_04320 ccmC; Cytochrome c-type biogenesis protein CcmC K02195 ccmC; heme exporter protein C
D NOVO_05285 heme exporter protein CcmB K02194 ccmB; heme exporter protein B
D NOVO_09015 ccmA; Cytochrome c biogenesis ATP-binding export protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D NOVO_00850 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D NOVO_09440 sugar ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D NOVO_01600 proP_1; Proline porter II K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D NOVO_01560 ampG_1; AmpG K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D NOVO_04455 ampG_2; AmpG K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D NOVO_06930 ydhC; Inner membrane transport protein ydhC K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D NOVO_00765 emrB_1; Multidrug resistance protein B K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D NOVO_06935 emrB_2; Multidrug resistance protein B K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D NOVO_00495 qacA; Antiseptic resistance protein K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein
D NOVO_02935 stringent starvation protein A K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D NOVO_07460 mscM; Miniconductance mechanosensitive channel K16053 ybdG; miniconductance mechanosensitive channel
D NOVO_06260 Magnesium transporter mgtE K06213 mgtE; magnesium transporter
D NOVO_06065 motA; Chemotaxis protein MotA K02556 motA; chemotaxis protein MotA
D NOVO_06060 motB; Chemotaxis protein MotB K02557 motB; chemotaxis protein MotB
D NOVO_03845 exbB; Biopolymer transport protein exbB K03562 tolQ; biopolymer transport protein TolQ
D NOVO_03840 exbD; Biopolymer transport protein exbD K03560 tolR; biopolymer transport protein TolR
D NOVO_03730 corA; Magnesium transport protein CorA K03284 corA; magnesium transporter
D NOVO_03675 yfjD; Putative Mg2+ and Co2+ transporter CorB K03699 tlyC; magnesium and cobalt exporter, CNNM family
D NOVO_01495 oprP; Outer membrane protein D1 K07221 oprO_P; phosphate-selective porin OprO and OprP
D NOVO_07940 bepC; Outer membrane efflux protein BepC precursor K12340 tolC; outer membrane protein
D NOVO_02185 Outer membrane protein omp85 precursor K07277 SAM50; outer membrane protein insertion porin family
D NOVO_06415 yfgL; Lipoprotein yfgL precursor K17713 bamB; outer membrane protein assembly factor BamB
D NOVO_06990 comL; Competence lipoprotein ComL precursor K05807 bamD; outer membrane protein assembly factor BamD
D NOVO_03855 lipopolysaccharide transport periplasmic protein LptA K09774 lptA; lipopolysaccharide export system protein LptA
D NOVO_03860 hypothetical protein K11719 lptC; lipopolysaccharide export system protein LptC
D NOVO_05540 lptD; Organic solvent tolerance protein K04744 lptD; LPS-assembly protein
D NOVO_03405 tlyC; Hemolysin C K06189 corC; hemolysin (HlyC) family protein
D NOVO_05840 fieF; Ferrous-iron efflux pump FieF K13283 fieF; ferrous-iron efflux pump FieF
D NOVO_02965 sugE; Quaternary ammonium compound-resistance protein sugE K11741 sugE; quaternary ammonium compound-resistance protein SugE
D NOVO_02875 eamA; putative amino-acid metabolite efflux pump K15268 eamA; O-acetylserine/cysteine efflux transporter
D NOVO_01485 putative permease, DMT superfamily K15270 sam; S-adenosylmethionine uptake transporter
D NOVO_08940 kefC; K(+)/H(+) antiporter K03455 KEA1_2_3; K+:H+ antiporter
D NOVO_02995 mnhA1; Mnh complex subunit A1 K05566 mnhB; multicomponent Na+:H+ antiporter subunit B
D NOVO_03000 putative monovalent cation/H+ antiporter subunit B K05566 mnhB; multicomponent Na+:H+ antiporter subunit B
D NOVO_03005 mnhC1; Mrp complex subunit C1 K05567 mnhC; multicomponent Na+:H+ antiporter subunit C
D NOVO_02215 hyfB; Hydrogenase-4 component B K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D NOVO_07330 mrpA; Multiple resistance and pH homeostasis protein A K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D NOVO_04815 putative monovalent cation/H+ antiporter subunit E K05569 mnhE; multicomponent Na+:H+ antiporter subunit E
D NOVO_02985 putative monovalent cation/H+ antiporter subunit F K05570 mnhF; multicomponent Na+:H+ antiporter subunit F
D NOVO_02990 putative monovalent cation/H+ antiporter subunit G K05571 mnhG; multicomponent Na+:H+ antiporter subunit G
D NOVO_06905 murJ; multidrug transporter MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D NOVO_03205 potassium transport protein Kup K03549 kup; KUP system potassium uptake protein
D NOVO_04460 argO; Arginine exporter protein ArgO K06895 lysE; L-lysine exporter family protein LysE/ArgO
D NOVO_05345 hypothetical protein K09125 yhhQ; queuosine precursor transporter
D NOVO_00265 ftsW; Cell division protein FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D NOVO_06240 efeU; Ferrous iron uptake protein K07243 FTR; high-affinity iron transporter
D NOVO_09310 hypothetical protein K15383 K15383; MtN3 and saliva related transmembrane protein
D NOVO_04435 Minor outer membrane protein Omp16 K03640 pal; peptidoglycan-associated lipoprotein
D NOVO_04425 tolB; translocation protein TolB K03641 tolB; TolB protein
D NOVO_07630 dsbD; Thiol:disulfide interchange protein DsbD precursor K08344 scsB; suppressor for copper-sensitivity B
D NOVO_00770 yibH; Inner membrane protein yibH K03543 emrA; membrane fusion protein, multidrug efflux system
D NOVO_06940 macA; Macrolide-specific efflux protein macA precursor K03543 emrA; membrane fusion protein, multidrug efflux system
D NOVO_04950 prsE; Type I secretion system membrane fusion protein PrsE K12537 hasE; membrane fusion protein, type I secretion system
D NOVO_05405 bepD; Efflux pump periplasmic linker BepD precursor K03585 acrA; membrane fusion protein, multidrug efflux system
D NOVO_04925 ccmF; Cytochrome c-type biogenesis protein CcmF K02198 ccmF; cytochrome c-type biogenesis protein CcmF
C 02044 Secretion system [BR:rbt02044]
D NOVO_07940 bepC; Outer membrane efflux protein BepC precursor K12340 tolC; outer membrane protein
D NOVO_04955 prsD; Type I secretion system ATP-binding protein PrsD K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D NOVO_04950 prsE; Type I secretion system membrane fusion protein PrsE K12537 hasE; membrane fusion protein, type I secretion system
D NOVO_03890 Flp pilus assembly protein, secretin CpaC K02280 cpaC; pilus assembly protein CpaC
D NOVO_05765 YGGT family protein K02221 yggT; YggT family protein
D NOVO_00290 ComE operon protein 2 K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D NOVO_01015 flhA; Flagellar biosynthesis protein flhA K02400 flhA; flagellar biosynthesis protein FlhA
D NOVO_08670 flhB; Flagellar biosynthetic protein flhB K02401 flhB; flagellar biosynthesis protein FlhB
D NOVO_05280 fliF; Flagellar M-ring protein K02409 fliF; flagellar M-ring protein FliF
D NOVO_05270 flagellar assembly protein H K02411 fliH; flagellar assembly protein FliH
D NOVO_07225 fliI; Flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D NOVO_05265 fliN; Flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D NOVO_08995 flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D NOVO_09000 fliP; Flagellar biosynthetic protein fliP precursor K02419 fliP; flagellar biosynthesis protein FliP
D NOVO_02555 fliQ; Flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D NOVO_07575 flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D NOVO_07275 type IV secretion system protein VirB3 K03198 virB3; type IV secretion system protein VirB3
D NOVO_02345 virB4_2; Type IV secretion system protein virB4 K03199 virB4; type IV secretion system protein VirB4 [EC:7.4.2.8]
D NOVO_07280 virB4_3; Type IV secretion system protein virB4 K03199 virB4; type IV secretion system protein VirB4 [EC:7.4.2.8]
D NOVO_07285 TrbL/VirB6 plasmid conjugal transfer protein K03201 virB6; type IV secretion system protein VirB6
D NOVO_07290 TrbL/VirB6 plasmid conjugal transfer protein K03201 virB6; type IV secretion system protein VirB6
D NOVO_07295 TrbL/VirB6 plasmid conjugal transfer protein K03201 virB6; type IV secretion system protein VirB6
D NOVO_07305 TrbL/VirB6 plasmid conjugal transfer protein K03201 virB6; type IV secretion system protein VirB6
D NOVO_07310 TrbL/VirB6 plasmid conjugal transfer protein K03201 virB6; type IV secretion system protein VirB6
D NOVO_03400 virB8; Type IV secretion system protein virB8 K03203 virB8; type IV secretion system protein VirB8
D NOVO_06495 ptlE; Pertussis toxin liberation protein E K03203 virB8; type IV secretion system protein VirB8
D NOVO_03395 virB9_1; Type IV secretion system protein virB9 precursor K03204 virB9; type IV secretion system protein VirB9
D NOVO_06490 virB9_2; Type IV secretion system protein virB9 precursor K03204 virB9; type IV secretion system protein VirB9
D NOVO_03390 Type IV secretion system protein virB10 K03195 virB10; type IV secretion system protein VirB10
D NOVO_03385 ptlH_2; Pertussis toxin liberation protein H K03196 virB11; type IV secretion system protein VirB11 [EC:7.4.2.8]
D NOVO_03380 traG; Conjugal transfer protein traG K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D NOVO_09190 conjugal transfer mating pair stabilization protein TraG K12056 traG; conjugal transfer mating pair stabilization protein TraG
D NOVO_09200 conjugal pilus assembly protein TraF K12057 traF; conjugal transfer pilus assembly protein TraF
D NOVO_09205 conjugal transfer mating pair stabilization protein TraN K12058 traN; conjugal transfer mating pair stabilization protein TraN
D NOVO_09215 conjugal transfer pilus assembly protein TrbC K12059 trbC; conjugal transfer pilus assembly protein TrbC
D NOVO_09220 conjugal transfer pilus assembly protein TraU K12060 traU; conjugal transfer pilus assembly protein TraU
D NOVO_09225 conjugal transfer pilus assembly protein TraW K12061 traW; conjugal transfer pilus assembly protein TraW
D NOVO_09235 traC_2; plasmid conjugative transfer protein TraC K12063 traC; conjugal transfer ATP-binding protein TraC
D NOVO_09245 conjugal transfer pilus assembly protein TraB K12065 traB; conjugal transfer pilus assembly protein TraB
D NOVO_09255 type IV conjugative transfer system protein TraE K12067 traE; conjugal transfer pilus assembly protein TraE
D NOVO_09260 conjugal transfer pilus assembly protein TraL K12068 traL; conjugal transfer pilus assembly protein TraL
D NOVO_09195 conjugal transfer pilus assembly protein TraH K12072 traH; conjugative transfer pilus assembly protein TraH
D NOVO_01715 ptlH_1; Pertussis toxin liberation protein H K20527 trbB; type IV secretion system protein TrbB [EC:7.4.2.8]
D NOVO_01720 conjugal transfer protein TrbC K20528 trbC; type IV secretion system protein TrbC
D NOVO_01725 conjugal transfer protein TrbD K20529 trbD; type IV secretion system protein TrbD
D NOVO_01730 virB4_1; Type IV secretion system protein virB4 K20530 trbE; type IV secretion system protein TrbE [EC:7.4.2.8]
D NOVO_01755 conjugal transfer protein TrbF K20531 trbF; type IV secretion system protein TrbF
D NOVO_01760 conjugal transfer protein TrbG K20532 trbG; type IV secretion system protein TrbG
D NOVO_01765 Type IV secretion system protein virB10 K20533 trbI; type IV secretion system protein TrbI
D NOVO_01750 conjugal transfer protein TrbL K07344 trbL; type IV secretion system protein TrbL
D NOVO_08340 secA_2; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D NOVO_04520 secB; Protein-export protein SecB K03071 secB; preprotein translocase subunit SecB
D NOVO_00825 secD; preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D NOVO_02665 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D NOVO_08845 secF; preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D NOVO_02280 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D NOVO_06205 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D NOVO_07635 ffh; p48 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D NOVO_01940 ftsY; Cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D NOVO_08170 hypothetical protein K03210 yajC; preprotein translocase subunit YajC
D NOVO_03435 yidC; Oxa1Ec K03217 yidC; YidC/Oxa1 family membrane protein insertase
D NOVO_05130 twin arginine translocase protein A K03116 tatA; sec-independent protein translocase protein TatA
D NOVO_01510 tatC; Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:rbt02042]
D NOVO_03675 yfjD; Putative Mg2+ and Co2+ transporter CorB K03699 tlyC; magnesium and cobalt exporter, CNNM family
C 02022 Two-component system [BR:rbt02022]
D NOVO_05970 phoR; Phosphate regulon sensor protein phoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D NOVO_06970 phoB; Phosphate regulon transcriptional regulatory protein phoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D NOVO_02715 envZ; Osmolarity sensor protein EnvZ K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D NOVO_06745 ompR; Transcriptional regulatory protein OmpR K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D NOVO_02485 kdpE; KDP operon transcriptional regulatory protein KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D NOVO_01535 yycG_2; Sensor histidine kinase YycG K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D NOVO_07815 walK; Sensor protein kinase walK K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D NOVO_00805 glnG; Nitrogen regulation protein NR(I) K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D NOVO_06525 cheA; Chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D NOVO_04545 cheY_1; Chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D NOVO_06515 cheY_2; Chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D NOVO_06510 cheB; Chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D NOVO_03935 pleD_2; Stalked cell differentiation-controlling protein K02488 pleD; two-component system, cell cycle response regulator [EC:2.7.7.65]
D NOVO_03785 ctrA; Cell cycle response regulator CtrA K13584 ctrA; two-component system, cell cycle response regulator CtrA
C 02035 Bacterial motility proteins [BR:rbt02035]
D NOVO_06525 cheA; Chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D NOVO_06520 purine-binding chemotaxis protein K03408 cheW; purine-binding chemotaxis protein CheW
D NOVO_06505 cheR; Chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D NOVO_06510 cheB; Chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D NOVO_04545 cheY_1; Chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D NOVO_06515 cheY_2; Chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D NOVO_04505 aer; Aerotaxis receptor K03406 mcp; methyl-accepting chemotaxis protein
D NOVO_05215 bdlA; Chemotaxis regulator BdlA K03406 mcp; methyl-accepting chemotaxis protein
D NOVO_05270 flagellar assembly protein H K02411 fliH; flagellar assembly protein FliH
D NOVO_07225 fliI; Flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D NOVO_08995 flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D NOVO_09000 fliP; Flagellar biosynthetic protein fliP precursor K02419 fliP; flagellar biosynthesis protein FliP
D NOVO_02555 fliQ; Flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D NOVO_07575 flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D NOVO_01015 flhA; Flagellar biosynthesis protein flhA K02400 flhA; flagellar biosynthesis protein FlhA
D NOVO_08670 flhB; Flagellar biosynthetic protein flhB K02401 flhB; flagellar biosynthesis protein FlhB
D NOVO_05275 fliG; Flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D NOVO_01450 fliM; Flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D NOVO_05265 fliN; Flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D NOVO_05280 fliF; Flagellar M-ring protein K02409 fliF; flagellar M-ring protein FliF
D NOVO_08235 flgI; Basal body P-ring protein K02394 flgI; flagellar P-ring protein FlgI
D NOVO_04040 flagellar basal body P-ring biosynthesis protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D NOVO_04045 flgH; Basal body L-ring protein K02393 flgH; flagellar L-ring protein FlgH
D NOVO_01455 fliL; Flagellar FliL protein K02415 fliL; flagellar protein FliL
D NOVO_02550 flagellar hook-basal body protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D NOVO_02545 flgC; Putative proximal rod protein K02388 flgC; flagellar basal-body rod protein FlgC
D NOVO_02310 flgD; Basal-body rod modification protein flgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D NOVO_01460 flgG_1; Distal rod protein K02391 flgF; flagellar basal-body rod protein FlgF
D NOVO_01465 flgG_2; Distal rod protein K02392 flgG; flagellar basal-body rod protein FlgG
D NOVO_02305 flgE; Flagellar hook protein flgE K02390 flgE; flagellar hook protein FlgE
D NOVO_05070 flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D NOVO_08220 flgK; Flagellar hook-associated protein 1 K02396 flgK; flagellar hook-associated protein 1
D NOVO_08215 flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D NOVO_07435 fliC; A-type flagellin K02406 fliC; flagellin
D NOVO_00610 fliD; Flagellar cap protein K02407 fliD; flagellar hook-associated protein 2
D NOVO_00605 flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS
D NOVO_06065 motA; Chemotaxis protein MotA K02556 motA; chemotaxis protein MotA
D NOVO_06060 motB; Chemotaxis protein MotB K02557 motB; chemotaxis protein MotB
D NOVO_08210 flagellar assembly protein FliW K13626 fliW; flagellar assembly factor FliW
D NOVO_03890 Flp pilus assembly protein, secretin CpaC K02280 cpaC; pilus assembly protein CpaC
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:rbt04812]
D NOVO_00775 mreB; Rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D NOVO_04175 ftsZ; Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D NOVO_03185 ftsA; Cell division protein FtsA K03590 ftsA; cell division protein FtsA
D NOVO_04010 plasmid-partitioning protein RepA K03496 parA; chromosome partitioning protein
D NOVO_04285 soj; Sporulation initiation inhibitor protein soj K03496 parA; chromosome partitioning protein
D NOVO_08610 plasmid partitioning protein RepA K03496 parA; chromosome partitioning protein
D NOVO_09105 Plasmid partitioning protein ParA K03496 parA; chromosome partitioning protein
D NOVO_09460 parA; Plasmid partitioning protein ParA K03496 parA; chromosome partitioning protein
D NOVO_04280 parB; Chromosome-partitioning protein parB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D NOVO_09455 parB; Plasmid partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:rbt04147]
D NOVO_06295 htpG; High temperature protein G K04079 HSP90A; molecular chaperone HtpG
D NOVO_05890 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D NOVO_03745 gap; Glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D NOVO_03740 pgk; Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D NOVO_00270 tsaA; putative peroxiredoxin K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D NOVO_08195 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D NOVO_07960 dnaK; Heat shock protein 70 K04043 dnaK; molecular chaperone DnaK
D NOVO_04745 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D NOVO_05185 guaB; Inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D NOVO_02675 tufA_1; Elongation factor Tu K02358 tuf; elongation factor Tu
D NOVO_06095 tufA_2; Elongation factor Tu K02358 tuf; elongation factor Tu
D NOVO_04995 HIT-like protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D NOVO_05870 phbA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D NOVO_06210 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D NOVO_06575 glnA; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D NOVO_07010 puuA; Gamma-glutamylputrescine synthetase PuuA K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D NOVO_05915 hemB; Delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D NOVO_03830 purH; Bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D NOVO_03505 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D NOVO_04620 lpd3; Dihydrolipoyl dehydrogenase 3 K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D NOVO_02285 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 02048 Prokaryotic defense system [BR:rbt02048]
D NOVO_00455 ybaQ; putative HTH-type transcriptional regulator ybaQ K21498 higA-1; antitoxin HigA-1
D NOVO_08540 Ribonuclease VapC22 K28279 vapC22; ribonuclease VapC22 [EC:3.1.-.-]
D NOVO_08545 hypothetical protein K28280 vapB22; antitoxin VapB22
D NOVO_04175 ftsZ; Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D NOVO_00775 mreB; Rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D NOVO_03050 gltX; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D NOVO_07565 gltX1; Glutamate--tRNA ligase 1 K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D NOVO_08165 Flavinator of succinate dehydrogenase K09159 cptB; antitoxin CptB
D NOVO_05085 nifS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D NOVO_05090 iscS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors [BR:rbt04054]
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides [BR:rbt04052]
D NOVO_03105 putative nicotinate phosphoribosyltransferase K03462 NAMPT; nicotinamide phosphoribosyltransferase [EC:2.4.2.12]
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:rbt01504]
D NOVO_00495 qacA; Antiseptic resistance protein K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein
D NOVO_05530 vanX; D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D NOVO_05405 bepD; Efflux pump periplasmic linker BepD precursor K03585 acrA; membrane fusion protein, multidrug efflux system
D NOVO_07940 bepC; Outer membrane efflux protein BepC precursor K12340 tolC; outer membrane protein
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins [BR:rbt00536]
D NOVO_09090 hypothetical protein K15125 fhaB; filamentous hemagglutinin
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:rbt03100]
D NOVO_04555 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D NOVO_04720 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D NOVO_00910 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D NOVO_03570 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D NOVO_05520 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D NOVO_07810 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D NOVO_02595 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D NOVO_07180 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D NOVO_07935 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D NOVO_03070 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D NOVO_08615 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D NOVO_05735 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D NOVO_02370 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D NOVO_06090 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D NOVO_05850 tRNA-His K14226 tRNA-His; tRNA His
D NOVO_03535 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D NOVO_02760 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D NOVO_03875 tRNA-Ser K14228 tRNA-Leu; tRNA Leu
D NOVO_06255 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D NOVO_06845 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D NOVO_07915 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D NOVO_01660 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D NOVO_08475 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D NOVO_00165 tRNA-Met K14230 tRNA-Met; tRNA Met
D NOVO_04220 tRNA-Met K14230 tRNA-Met; tRNA Met
D NOVO_05770 tRNA-Met K14230 tRNA-Met; tRNA Met
D NOVO_02970 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D NOVO_01890 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D NOVO_04960 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D NOVO_05325 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D NOVO_06580 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D NOVO_05895 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D NOVO_07100 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D NOVO_07655 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D NOVO_02670 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D NOVO_06085 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D NOVO_04440 tRNA-Val K14237 tRNA-Val; tRNA Val
D NOVO_05875 tRNA-Val K14237 tRNA-Val; tRNA Val
D NOVO_03225 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D NOVO_06390 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D NOVO_06395 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D NOVO_00295 bacterial RNase P K01978 rnpB; RNase P catalytic RNA component
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A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D NOVO_07470 yueD; Benzil reductase K16216 yueD; benzil reductase ((S)-benzoin forming) [EC:1.1.1.320]
D NOVO_04830 Chlamydia protein associating with death domains K06137 pqqC; pyrroloquinoline-quinone synthase [EC:1.3.3.11]
D NOVO_08020 qorA; Quinone oxidoreductase 1 K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D NOVO_05940 bcp; Putative peroxiredoxin bcp K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D NOVO_07170 lnt; Apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D NOVO_03765 lgt; Prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D NOVO_04570 yqfL; Putative phosphotransferase yqfL K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D NOVO_02785 phosphohistidine phosphatase K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D NOVO_06430 ycfH; putative deoxyribonuclease YcfH K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D NOVO_00315 Phage-related lysozyme (muraminidase) K01185 E3.2.1.17; lysozyme [EC:3.2.1.17]
D NOVO_00720 def1; Peptide deformylase 1 K01462 PDF; peptide deformylase [EC:3.5.1.88]
D NOVO_04450 def; Peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
C 99981 Carbohydrate metabolism
C 99982 Energy metabolism
D NOVO_04325 fdxA; Ferredoxin II K05524 fdxA; ferredoxin
D NOVO_05095 nifU; NifU-like protein K04488 iscU; nitrogen fixation protein NifU and related proteins
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D NOVO_01575 hypothetical protein K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D NOVO_04865 hypothetical protein K07027 K07027; glycosyltransferase 2 family protein
C 99987 Cofactor metabolism
D NOVO_00520 ubiB; putative ubiquinone biosynthesis protein UbiB K03688 ubiB; ubiquinone biosynthesis protein
D NOVO_02945 hypothetical protein K18587 COQ9; ubiquinone biosynthesis protein COQ9
D NOVO_03550 ratA; Ribosome association toxin RatA K18588 COQ10; coenzyme Q-binding protein COQ10
C 99988 Secondary metabolism
C 99999 Others
D NOVO_08550 DoxX K15977 K15977; putative oxidoreductase
D NOVO_05190 estB; Carboxylesterase 2 K06999 K06999; phospholipase/carboxylesterase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D NOVO_02295 cspC; Cold shock protein CspC K03704 cspA; cold shock protein
D NOVO_08050 cspE; Cold shock-like protein CspE K03704 cspA; cold shock protein
C 99974 Translation
C 99975 Protein processing
D NOVO_07910 tig; Trigger factor K03545 tig; trigger factor
D NOVO_08495 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein
D NOVO_04155 comM; Competence protein ComM K07391 comM; magnesium chelatase family protein
C 99976 Replication and repair
D NOVO_02750 hypothetical protein K03630 radC; DNA repair protein RadC
D NOVO_05300 rmuC; DNA recombination protein rmuC K09760 rmuC; DNA recombination protein RmuC
D NOVO_04180 hypothetical protein K07460 yraN; putative endonuclease
D NOVO_01070 smf; DNA processing protein DprA K04096 smf; DNA processing protein
D NOVO_07700 rarA_2; Replication-associated recombination protein A K07478 ycaJ; putative ATPase
D NOVO_00565 Transposase IS116/IS110/IS902 family protein K07486 K07486; transposase
C 99979 Viral proteins
C 99998 Others
D NOVO_06755 hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D NOVO_03960 puuP; Putrescine importer PuuP K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D NOVO_03965 yveA; L-aspartate transporter K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D NOVO_02395 ybhI; Inner membrane protein ybhI K03319 TC.DASS; divalent anion:Na+ symporter, DASS family
C 99978 Cell growth
C 99993 Cell motility
C 99995 Signaling proteins
D NOVO_07255 typA; Tyrosine phosphorylated protein A K06207 typA; GTP-binding protein
D NOVO_03415 ybeZ; PhoH-like protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
C 99992 Structural proteins
D NOVO_02975 mlaA; putative phospholipid-binding lipoprotein mlaA precursor K04754 mlaA; phospholipid-binding lipoprotein MlaA
D NOVO_02180 Outer membrane protein K06142 hlpA; outer membrane protein
D NOVO_03325 Outer membrane protein W K07275 ompW; outer membrane protein
D NOVO_03705 outer membrane protein W K07275 ompW; outer membrane protein
D NOVO_03710 outer membrane protein W K07275 ompW; outer membrane protein
D NOVO_03715 Outer membrane protein W K07275 ompW; outer membrane protein
D NOVO_03725 Outer membrane protein W K07275 ompW; outer membrane protein
D NOVO_08030 ccmE; Heme chaperone CcmE K02197 ccmE; cytochrome c-type biogenesis protein CcmE
D NOVO_04915 ccmH; Cytochrome c-type biogenesis protein CcmH precursor K02200 ccmH; cytochrome c-type biogenesis protein CcmH
C 99994 Others
D NOVO_02465 phoU; Phosphate transport system protein phoU K02039 phoU; phosphate transport system protein
D NOVO_03075 cutA; Divalent-cation tolerance protein CutA K03926 cutA; periplasmic divalent cation tolerance protein
D NOVO_01025 apaG; CO2+/MG2+ efflux protein ApaG K06195 apaG; ApaG protein
D NOVO_03650 frataxin-like protein K06202 cyaY; iron-sulfur cluster assembly protein CyaY
B
B 09194 Poorly characterized
C 99996 General function prediction only
D NOVO_07165 ctb; Group 3 truncated hemoglobin ctb K06886 glbN; hemoglobin
D NOVO_00350 rssA; NTE family protein rssA K07001 K07001; NTE family protein
D NOVO_06320 Patatin K07001 K07001; NTE family protein
D NOVO_06455 erpA; Iron-sulfur cluster insertion protein erpA K15724 erpA; iron-sulfur cluster insertion protein
D NOVO_03375 hypothetical protein K07058 K07058; membrane protein
D NOVO_06635 Phosphoribosyl transferase domain protein K07100 K07100; putative phosphoribosyl transferase
D NOVO_02530 putative rhodanese-related sulfurtransferase K07146 K07146; UPF0176 protein
D NOVO_01815 LemA family protein K03744 lemA; LemA protein
C 99997 Function unknown
D NOVO_00900 Thioredoxin-related protein K06888 K06888; uncharacterized protein
D NOVO_04310 acyl-CoA esterase K06889 K06889; uncharacterized protein
D NOVO_00935 ybhL; Inner membrane protein YbhL K06890 K06890; uncharacterized protein
D NOVO_05075 Alpha/beta hydrolase family protein K07018 K07018; uncharacterized protein
D NOVO_01630 TRAP transporter solute receptor, TAXI family K07080 K07080; uncharacterized protein
D NOVO_03440 yidD; Putative membrane protein insertion efficiency factor K08998 K08998; uncharacterized protein
D NOVO_06655 hypothetical protein K09706 K09706; uncharacterized protein
D NOVO_00735 hypothetical protein K09791 K09791; uncharacterized protein
D NOVO_08535 hypothetical protein K09797 K09797; uncharacterized protein
D NOVO_09010 hypothetical protein K09797 K09797; uncharacterized protein
D NOVO_03925 Divergent polysaccharide deacetylase K09798 K09798; uncharacterized protein
D NOVO_07400 hypothetical protein K09861 K09861; uncharacterized protein
D NOVO_03810 hypothetical protein K09985 K09985; uncharacterized protein
D NOVO_03055 hypothetical protein K09987 K09987; uncharacterized protein
D NOVO_07945 hypothetical protein K09991 K09991; uncharacterized protein
D NOVO_04760 hypothetical protein K07276 K07276; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: August 4, 2026