+D Messenger RNA Biogenesis KO #

  Prokaryotic Defense System - Rugosibacter aromaticivorans

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ACRISPR-Cas system B Universal Cas proteins C PG1C_12155 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1 C PG1C_07835 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1 C PG1C_12150 CRISPR-associated protein Cas2 K09951 cas2; CRISPR-associated protein Cas2 C PG1C_07830 CRISPR-associated protein Cas2 K09951 cas2; CRISPR-associated protein Cas2 B Type I CRISPR-Cas system C Type I signiture cas proteins C Subtype I-A factors D PG1C_12160 CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] C Subtype I-B factors D PG1C_12160 CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] C Subtype I-C factors D PG1C_12175 hypothetical protein K19117 csd1; CRISPR-associated protein Csd1 D PG1C_12170 hypothetical protein K19118 csd2; CRISPR-associated protein Csd2 D PG1C_12160 CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] C Subtype I-D factors D PG1C_12160 CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] C Subtype I-E factors C Subtype I-F factors C Subtype I-U factors B Type II CRISPR-Cas system C Type II signiture cas proteins D PG1C_07840 CRISPR-associated protein Csn1 K09952 csn1; CRISPR-associated endonuclease Csn1 [EC:3.1.-.-] C Subtype II-A factors C Subtype II-B factors D PG1C_12160 CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] B Type III CRISPR-Cas system C Type III signiture cas proteins C Subtype III-A factors C Subtype III-B factors C Subtype III-U factors # ARestriction and modification system (R-M system) B Type I R-M system C PG1C_03540 restriction endonuclease subunit R K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] C PG1C_10450 restriction endonuclease subunit R K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] C PG1C_10430 hypothetical protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] B Type II R-M system C Restriction endonucleases C DNA methyltransferases D PG1C_10720 DNA methyltransferase K07317 K07317; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D PG1C_02805 cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] B Type III R-M system C PG1C_07920 type III restriction enzyme, res subunit K01156 res; type III restriction enzyme [EC:3.1.21.5] C PG1C_01030 restriction endonuclease subunit R K01156 res; type III restriction enzyme [EC:3.1.21.5] C PG1C_04095 restriction endonuclease K01156 res; type III restriction enzyme [EC:3.1.21.5] C PG1C_05565 type III restriction enzyme, res subunit K01156 res; type III restriction enzyme [EC:3.1.21.5] C PG1C_00655 restriction endonuclease subunit R K01156 res; type III restriction enzyme [EC:3.1.21.5] C PG1C_01035 DNA methyltransferase K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72] C PG1C_04105 DNA methylase K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72] C PG1C_07915 DNA methylase K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72] C PG1C_05580 DNA methylase K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72] C PG1C_00660 DNA methyltransferase K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72] B Type IV R-M system C PG1C_02640 restriction endonuclease K07448 mrr; restriction system protein # AToxin-antitoxin system (TA system) B Type I TA system C Hok-Sok C SymE-SymR C Ldr-Rdl C TisB-IstR C Ibs-Sib C ShoB-OhsC C RalR-RalA B Type II TA system C MazF-MazE C ChpB-ChpS C YhaV-PrlF D PG1C_12385 toxin K19155 yhaV; toxin YhaV [EC:3.1.-.-] D PG1C_12380 regulator K19156 prlF; antitoxin PrlF C RelE/StbE-RelB/StbD C YafQ-dinJ D PG1C_09185 addiction module antitoxin K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-] D PG1C_09190 translation repressor RelB K07473 dinJ; DNA-damage-inducible protein J C YoeB-YefM D PG1C_11405 toxin YoeB K19158 yoeB; toxin YoeB [EC:3.1.-.-] D PG1C_01070 toxin of toxin-antitoxin system K19158 yoeB; toxin YoeB [EC:3.1.-.-] D PG1C_11410 hypothetical protein K19159 yefM; antitoxin YefM D PG1C_01075 antitoxin K19159 yefM; antitoxin YefM C HipA-HipB D PG1C_05230 phosphatidylinositol kinase K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] C HicA-HicB C YafO-YafN C Hha-TomB C PspC-PspB C CcdB-CcdA D PG1C_03205 hypothetical protein K19164 ccdA; antitoxin CcdA C ParE-ParD D PG1C_08870 plasmid stabilization system protein K19092 parE1_3_4; toxin ParE1/3/4 D PG1C_08875 CopG family transcriptional regulator K07746 parD1_3_4; antitoxin ParD1/3/4 C Doc-Phd D PG1C_02520 hypothetical protein K07341 doc; death on curing protein C HigB-HigA D PG1C_11380 excinuclease ABC subunit A K07334 higB-1; toxin HigB-1 D PG1C_05355 hypothetical protein K07334 higB-1; toxin HigB-1 D PG1C_11385 XRE family transcriptional regulator K21498 higA-1; antitoxin HigA-1 D PG1C_05350 virulence factor K21498 higA-1; antitoxin HigA-1 C MqsR-MqsA C VapC-VapB C PezT-PezA C YobL-YobK C YokI-YokJ C YqcG-YqcF C YxiD-YxxD C FitB-FitA D PG1C_07825 twitching motility protein PilT K07062 fitB; toxin FitB [EC:3.1.-.-] D PG1C_13075 recombinase K07062 fitB; toxin FitB [EC:3.1.-.-] C BC_0920-BC_0921 C Type II TA system related factors D PG1C_02605 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D PG1C_00070 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D PG1C_09125 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D PG1C_07395 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] B Type III TA system C AbiQ system B Type IV TA system C YeeV-YeeU C CptA-CptB D PG1C_07675 hypothetical protein K19168 cptA; toxin CptA B Type V TA system C GhoT-GhoS # ADNA phosphothiolation system B Sulfur modification proteins C PG1C_03115 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C PG1C_03120 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] B DNA phosphorothioation-dependent restriction proteins ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: November 7, 2023