+E Ribosome biogenesis KO #

  Ribosome Biogenesis - Methanocella arvoryzae

% ! AEukaryotic type B Sno RNPs C Box C/D snoRNPs D LRC385 flpA; fibrillarin-like pre-rRNA processing protein K14563 NOP1; rRNA 2'-O-methyltransferase fibrillarin [EC:2.1.1.-] D LRC386 Nop56-like pre-mRNA processing protein K14564 NOP56; nucleolar protein 56 C Box H/ACA snoRNPs B 90S particles C U3 small nucleolar RNA-associated proteins C Helicases C GTPase C RNase C Kinase C Other 90S particles D LRC289 conserved hypothetical protein K06961 KRR1; ribosomal RNA assembly protein B Pre-40S particles C Kinases D LRC287 putative serine/threonine protein kinase K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1] D RRC337 predicted protein kinase K07179 RIOK2; RIO kinase 2 [EC:2.7.11.1] C Export and cytoplasmic maturation factors D RCIX2459 adk-1; putative adenylate kinase K18532 AK6; adenylate kinase [EC:2.7.4.3] D RCIX578 conserved hypothetical protein K09140 TSR3; rRNA small subunit aminocarboxypropyltransferase [EC:2.5.1.157] C Other pre-40S particles D RCIX1210 RNase L inhibitor K06174 ABCE1; ATP-binding cassette, sub-family E, member 1 B Pre-60S particles C Helicases C GTPases D RCIX1018 conserved hypothetical GTP-binding protein K06943 NOG1; nucleolar GTP-binding protein C RNases D RNase MRP E RCIX2552 rnp1; putative RNase P, component 1 K03538 POP4; ribonuclease P protein subunit POP4 [EC:3.1.26.5] E RCIX2120 rnp2; putative RNase P, component 2 K03537 POP5; ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5] E RCIX2119 rnp3; putative RNase P, component 3 K03539 RPP1; ribonuclease P/MRP protein subunit RPP1 [EC:3.1.26.5] C Kinases D RRC355 conserved hypothetical protein K06947 GRC3; polynucleotide 5'-hydroxyl-kinase GRC3/NOL9 [EC:2.7.1.-] C Export and cytoplasmic maturation factors D RCIX1042 eif6; translation initiation factor 6 K03264 EIF6; translation initiation factor 6 D RCIX1354 predicted nonsense mediated mRNA decay protein K07562 NMD3; 60S ribosomal export protein NMD3 D RCIX2122 conserved hypothetical protein K14574 SDO1; ribosome maturation protein SDO1 C 5-FMC complex C Ribosome quality control proteins D RCIX1130 cdc48-3; cell division cycle protein 48 K13525 VCP; transitional endoplasmic reticulum ATPase D RCIX685 cdc48-1; putative cell division cycle protein 48 K13525 VCP; transitional endoplasmic reticulum ATPase D RCIX691 cdc48-2; cell division cycle protein 48 K13525 VCP; transitional endoplasmic reticulum ATPase C Other pre-60S particles D LRC159 conserved hypothetical protein K07565 NIP7; 60S ribosome subunit biogenesis protein NIP7 B Other ribosome biogenesis factors C RCIX1862 conserved GTP-binding protein (Ras family) K03595 era; GTPase # AProkaryotic type B Sno RNPs C Box C/D snoRNPs D LRC386 Nop56-like pre-mRNA processing protein K14564 NOP56; nucleolar protein 56 D LRC145 rpl7ae; 50S ribosomal protein L7AE K02936 RP-L7Ae; large subunit ribosomal protein L7Ae C Box H/ACA snoRNPs D RCIX2110 conserved hypothetical protein K07569 gar1; RNA-binding protein B rRNA transcription factors C LRC360 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA B rRNA modification factors C 16S rRNA modification factors D RCIX2352 ksgA; putative dimethyladenosine rRNA methyltransferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D RCIX61 putative ribosomal RNA methyltransferase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] C 23S rRNA modification factors D RCIX2745 ftsJ; 23S rRNA methyltransferase J K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] D RCIX61 putative ribosomal RNA methyltransferase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] B ribosomal protein modification factors C RCIX281 predicted acetyltransferase (GNAT family) K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] C RCIX39 putative acetyltransferase (GNAT family) K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] C RCIX845 putative acetyltransferase (GNAT family) K03817 rimL; ribosomal-protein-serine acetyltransferase [EC:2.3.1.-] B rRNA processing factors B rRNA helicases C LRC345 ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] C RRC430 ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] B GTPases C RCIX1862 conserved GTP-binding protein (Ras family) K03595 era; GTPase C RCIX961 putative GTPase (EngC family) K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] C RCIX2332 conserved GTP-binding protein K03665 hflX; GTPase B Other maturation factors C RCIX2453 putative translation factor (YrdC family) K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] C RCIX2671 conserved hypothetical protein K07574 yhbY; RNA-binding protein C RCIX2622 conserved GTP-binding protein K06942 ychF; ribosome-binding ATPase # ARelated small nucleolar RNAs B Box C/D snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for 2'-O-ribose methylation B Box H/ACA snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for pseudouridynation B Other snoRNA ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: June 2, 2025