+D GENES KO #

  KEGG Orthology (KO) - Rothia dentocariosa

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:rdn00010] D HMPREF0733_10146 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D HMPREF0733_10351 phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D HMPREF0733_11393 glpX; fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D HMPREF0733_10798 fbaA; fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D HMPREF0733_11873 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D HMPREF0733_10822 gap; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D HMPREF0733_11870 gap; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D HMPREF0733_11871 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D HMPREF0733_11263 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D HMPREF0733_11367 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D HMPREF0733_11827 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D HMPREF0733_12159 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D HMPREF0733_10006 sucB; 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D HMPREF0733_10005 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D HMPREF0733_11916 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D HMPREF0733_11029 adhP; alcohol dehydrogenase, propanol-preferring K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D HMPREF0733_11439 aldB; aldehyde dehydrogenase B K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D HMPREF0733_11149 putative acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D HMPREF0733_11685 ppgK; polyphosphate--glucose phosphotransferase K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63] D HMPREF0733_11249 phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] D HMPREF0733_12043 bglH; aryl-phospho-beta-D-glucosidase BglH K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D HMPREF0733_10792 putative glucose-specific phosphotransferase enzyme IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] C 00020 Citrate cycle (TCA cycle) [PATH:rdn00020] D HMPREF0733_10027 sucA; oxoglutarate dehydrogenase (succinyl-transferring), E1 component K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61] D HMPREF0733_10005 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D HMPREF0733_10536 succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D HMPREF0733_10537 sucC; succinate-CoA ligase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D HMPREF0733_11361 sdhA; succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D HMPREF0733_11362 sQR; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D HMPREF0733_11359 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D HMPREF0733_11360 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D HMPREF0733_11390 fumC; fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D HMPREF0733_12206 mqo; malate dehydrogenase (quinone) K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4] D HMPREF0733_11249 phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] D HMPREF0733_12159 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D HMPREF0733_10006 sucB; 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] C 00030 Pentose phosphate pathway [PATH:rdn00030] D HMPREF0733_10146 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D HMPREF0733_11884 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D HMPREF0733_11882 pgl; 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31] D HMPREF0733_12158 gnd; phosphogluconate dehydrogenase (decarboxylating) K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D HMPREF0733_12174 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D HMPREF0733_11886 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D HMPREF0733_11885 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D HMPREF0733_12100 ribose 5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D HMPREF0733_11414 prs; ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D HMPREF0733_10798 fbaA; fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D HMPREF0733_11393 glpX; fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D HMPREF0733_10351 phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] C 00040 Pentose and glucuronate interconversions [PATH:rdn00040] D HMPREF0733_10210 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D HMPREF0733_12174 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D HMPREF0733_11304 GroES-like protein K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14] C 00051 Fructose and mannose metabolism [PATH:rdn00051] D HMPREF0733_10821 kinase, PfkB family K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D HMPREF0733_11253 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D HMPREF0733_11252 manB; phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D HMPREF0733_11358 putative mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D HMPREF0733_10351 phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D HMPREF0733_11393 glpX; fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D HMPREF0733_10582 hexose kinase, 1-phosphofructokinase family K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] D HMPREF0733_11304 GroES-like protein K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14] D HMPREF0733_10798 fbaA; fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D HMPREF0733_11873 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D HMPREF0733_12100 ribose 5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D HMPREF0733_10581 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D HMPREF0733_10872 manX; PTS system mannose-specific EIIAB component K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191] D HMPREF0733_10873 PTS system, mannose/fructose/sorbose family, IIC component K02795 manY; mannose PTS system EIIC component D HMPREF0733_10874 manZ; mannose permease IID component K02796 manZ; mannose PTS system EIID component C 00052 Galactose metabolism [PATH:rdn00052] D HMPREF0733_10882 putative galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D HMPREF0733_10134 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D HMPREF0733_10210 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D HMPREF0733_10049 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D HMPREF0733_10351 phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D HMPREF0733_10340 sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26] D HMPREF0733_10220 malL; oligo-1,6-glucosidase 1 K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10] D HMPREF0733_10219 malL; oligo-1,6-glucosidase 1 K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10] C 00053 Ascorbate and aldarate metabolism D HMPREF0733_11439 aldB; aldehyde dehydrogenase B K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00500 Starch and sucrose metabolism [PATH:rdn00500] D HMPREF0733_10339 PTS system sucrose-specific IIBC component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211] D HMPREF0733_10340 sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26] D HMPREF0733_10210 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D HMPREF0733_12043 bglH; aryl-phospho-beta-D-glucosidase BglH K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D HMPREF0733_11427 glycosyltransferase, group 1 family protein K16150 K16150; glycogen synthase [EC:2.4.1.11] D HMPREF0733_10220 malL; oligo-1,6-glucosidase 1 K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10] D HMPREF0733_10219 malL; oligo-1,6-glucosidase 1 K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10] D HMPREF0733_10792 putative glucose-specific phosphotransferase enzyme IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D HMPREF0733_10217 glvC; PTS system maltose-specific EIICB component K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-] D HMPREF0733_10218 endonuclease/exonuclease/phosphatase family protein K06896 mapP; maltose 6'-phosphate phosphatase [EC:3.1.3.90] D HMPREF0733_11187 alpha amylase, catalytic domain protein K01226 treC; trehalose-6-phosphate hydrolase [EC:3.2.1.93] D HMPREF0733_10146 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D HMPREF0733_10821 kinase, PfkB family K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:rdn00520] D HMPREF0733_10792 putative glucose-specific phosphotransferase enzyme IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D HMPREF0733_10821 kinase, PfkB family K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D HMPREF0733_10263 glmS; glutamine-fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D HMPREF0733_10268 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D HMPREF0733_11413 glmU; UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D HMPREF0733_12144 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D HMPREF0733_10383 UDP-N-acetylenolpyruvoylglucosamine reductase domain protein K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D HMPREF0733_11424 cytidylyltransferase K18431 legF; CMP-N,N'-diacetyllegionaminic acid synthase [EC:2.7.7.82] D HMPREF0733_11685 ppgK; polyphosphate--glucose phosphotransferase K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63] D HMPREF0733_10210 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D HMPREF0733_10882 putative galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D HMPREF0733_10134 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D HMPREF0733_10049 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D HMPREF0733_10872 manX; PTS system mannose-specific EIIAB component K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191] D HMPREF0733_10873 PTS system, mannose/fructose/sorbose family, IIC component K02795 manY; mannose PTS system EIIC component D HMPREF0733_10874 manZ; mannose permease IID component K02796 manZ; mannose PTS system EIID component D HMPREF0733_10146 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D HMPREF0733_11253 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D HMPREF0733_11252 manB; phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D HMPREF0733_11358 putative mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] C 00620 Pyruvate metabolism [PATH:rdn00620] D HMPREF0733_11149 putative acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D HMPREF0733_12159 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D HMPREF0733_10006 sucB; 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D HMPREF0733_10005 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D HMPREF0733_11029 adhP; alcohol dehydrogenase, propanol-preferring K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D HMPREF0733_10746 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D HMPREF0733_10759 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D HMPREF0733_11827 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D HMPREF0733_11485 Carbamoyl-phosphate synthase L chain, ATP binding domain protein K11263 bccA; acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14] D HMPREF0733_11146 putative acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D HMPREF0733_11439 aldB; aldehyde dehydrogenase B K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D HMPREF0733_11294 putative (S)-mandelate dehydrogenase K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3] D HMPREF0733_11916 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D HMPREF0733_12035 FAD linked oxidase, C-terminal domain protein K18930 dld; D-lactate dehydrogenase D HMPREF0733_12206 mqo; malate dehydrogenase (quinone) K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4] D HMPREF0733_11390 fumC; fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D HMPREF0733_11249 phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] D HMPREF0733_11958 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:rdn00630] D HMPREF0733_11149 putative acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D HMPREF0733_11485 Carbamoyl-phosphate synthase L chain, ATP binding domain protein K11263 bccA; acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14] D HMPREF0733_11494 carboxyl transferase domain protein K27094 accD5; propionyl-CoA/long-chain acyl-CoA carboxylase carboxyl transferase subunit [EC:6.4.1.3 6.4.1.- 2.1.3.15] D HMPREF0733_11493 hypothetical protein K27095 accE5; acyl-CoA carboxylase epsilon subunit D HMPREF0733_10397 catalase K03781 katE; catalase [EC:1.11.1.6] D HMPREF0733_10013 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D HMPREF0733_11691 glutamine synthetase, beta-grasp domain protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D HMPREF0733_11350 glyA; glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D HMPREF0733_10319 gcvP; glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D HMPREF0733_10318 gcvT; aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D HMPREF0733_10005 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D HMPREF0733_11648 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D HMPREF0733_10027 sucA; oxoglutarate dehydrogenase (succinyl-transferring), E1 component K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61] C 00640 Propanoate metabolism [PATH:rdn00640] D HMPREF0733_11149 putative acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D HMPREF0733_10746 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D HMPREF0733_10759 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D HMPREF0733_10605 putative pyruvate dehydrogenase E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D HMPREF0733_10625 dehydrogenase E1 component K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D HMPREF0733_10624 pdhB; pyruvate dehydrogenase E1 component subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D HMPREF0733_10604 pdhB; pyruvate dehydrogenase E1 component subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D HMPREF0733_10603 Biotin-requiring enzyme K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D HMPREF0733_10623 2-oxo acid dehydrogenase acyltransferase (catalytic domain) K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D HMPREF0733_10005 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D HMPREF0733_11485 Carbamoyl-phosphate synthase L chain, ATP binding domain protein K11263 bccA; acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14] D HMPREF0733_11936 gabT; 4-aminobutyrate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D HMPREF0733_11494 carboxyl transferase domain protein K27094 accD5; propionyl-CoA/long-chain acyl-CoA carboxylase carboxyl transferase subunit [EC:6.4.1.3 6.4.1.- 2.1.3.15] D HMPREF0733_11493 hypothetical protein K27095 accE5; acyl-CoA carboxylase epsilon subunit D HMPREF0733_10537 sucC; succinate-CoA ligase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D HMPREF0733_10536 succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D HMPREF0733_11916 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] C 00650 Butanoate metabolism [PATH:rdn00650] D HMPREF0733_11361 sdhA; succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D HMPREF0733_11362 sQR; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D HMPREF0733_11359 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D HMPREF0733_11360 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D HMPREF0733_11936 gabT; 4-aminobutyrate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D HMPREF0733_11938 succinate-semialdehyde dehydrogenase [NAD(P)+] K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D HMPREF0733_10992 putative alcohol dehydrogenase K18369 adh2; alcohol dehydrogenase [EC:1.1.1.-] D HMPREF0733_12200 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D HMPREF0733_12199 ilvN; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D HMPREF0733_10018 budA; alpha-acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5] D HMPREF0733_11915 putative (R,R)-butanediol dehydrogenase K00004 BDH; (R,R)-butanediol dehydrogenase / meso-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.4 1.1.1.- 1.1.1.303] C 00660 C5-Branched dibasic acid metabolism [PATH:rdn00660] D HMPREF0733_12200 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D HMPREF0733_12199 ilvN; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D HMPREF0733_10018 budA; alpha-acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5] D HMPREF0733_10537 sucC; succinate-CoA ligase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D HMPREF0733_10536 succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D HMPREF0733_12146 leuC; 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D HMPREF0733_12145 leuD; 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D HMPREF0733_12188 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism D HMPREF0733_11873 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:rdn00190] D HMPREF0733_11373 pyridine nucleotide-disulfide oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] D HMPREF0733_11361 sdhA; succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D HMPREF0733_11362 sQR; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D HMPREF0733_11359 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D HMPREF0733_11360 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D HMPREF0733_11928 rieske [2Fe-2S] domain protein K03890 qcrA; quinol---cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D HMPREF0733_11927 cytochrome b/b6 family protein K03891 qcrB; quinol---cytochrome-c reductase cytochrome b subunit [EC:7.1.1.8] D HMPREF0733_11929 cytochrome C K03889 qcrC; quinol---cytochrome-c reductase cytochrome c subunit [EC:7.1.1.8] D HMPREF0733_11887 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D HMPREF0733_11926 hypothetical protein K27109 ctaF; cytochrome c oxidase subunit IV [EC:7.1.1.9] D HMPREF0733_11930 cytochrome c oxidase, subunit III K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9] D HMPREF0733_11925 ctaD; cytochrome c oxidase, subunit 1 K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9] D HMPREF0733_11924 coxB; cytochrome c oxidase, subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9] D HMPREF0733_11888 cytochrome oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9] D HMPREF0733_11750 bacterial cytochrome ubiquinol oxidase K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D HMPREF0733_11751 cydB; cytochrome d ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D HMPREF0733_11724 atpA; ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D HMPREF0733_11726 atpD; ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D HMPREF0733_11725 atpG; ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D HMPREF0733_11723 atpH; ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D HMPREF0733_11727 ATP synthase, delta/epsilon subunit, beta-sandwich domain protein K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D HMPREF0733_11720 atpB; ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a D HMPREF0733_11722 atpF; ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b D HMPREF0733_11721 atpE; ATP synthase subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c D HMPREF0733_10726 ppa; inorganic diphosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] D HMPREF0733_10356 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D HMPREF0733_10269 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation by Calvin cycle [PATH:rdn00710] D HMPREF0733_11871 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D HMPREF0733_10822 gap; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D HMPREF0733_11870 gap; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D HMPREF0733_10798 fbaA; fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D HMPREF0733_11393 glpX; fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D HMPREF0733_11886 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D HMPREF0733_12100 ribose 5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D HMPREF0733_11873 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D HMPREF0733_12174 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D HMPREF0733_11885 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] C 00720 Other carbon fixation pathways [PATH:rdn00720] D HMPREF0733_11390 fumC; fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D HMPREF0733_11361 sdhA; succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D HMPREF0733_11362 sQR; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D HMPREF0733_11359 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D HMPREF0733_11360 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D HMPREF0733_10536 succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D HMPREF0733_10537 sucC; succinate-CoA ligase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D HMPREF0733_12047 fhs; formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3] D HMPREF0733_11351 folD; tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain protein K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D HMPREF0733_11052 methylenetetrahydrofolate reductase (NAD(P)H) K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D HMPREF0733_10759 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D HMPREF0733_10746 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D HMPREF0733_11149 putative acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] C 00680 Methane metabolism [PATH:rdn00680] D HMPREF0733_11350 glyA; glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D HMPREF0733_11367 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D HMPREF0733_10798 fbaA; fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D HMPREF0733_11393 glpX; fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D HMPREF0733_10351 phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D HMPREF0733_10746 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D HMPREF0733_10759 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D HMPREF0733_11149 putative acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D HMPREF0733_11263 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] C 00910 Nitrogen metabolism [PATH:rdn00910] D HMPREF0733_10320 transporter, major facilitator family protein K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D HMPREF0733_10324 nitrate reductase, alpha subunit K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-] D HMPREF0733_10323 narH; nitrate reductase, beta subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-] D HMPREF0733_10321 narI; respiratory nitrate reductase, gamma subunit K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-] D HMPREF0733_12085 nirB; nitrite reductase [NAD(P)H], large subunit K00362 nirB; nitrite reductase (NADH) large subunit [EC:1.7.1.15] D HMPREF0733_12083 nirD; nitrite reductase [NAD(P)H], small subunit K00363 nirD; nitrite reductase (NADH) small subunit [EC:1.7.1.15] D HMPREF0733_11085 putative nitrite reductase, copper-dependent K00368 nirK; nitrite reductase (NO-forming) [EC:1.7.2.1] D HMPREF0733_11863 putative nitric oxide reductase K04561 norB; nitric oxide reductase subunit B [EC:1.7.2.5] D HMPREF0733_10828 bacterial NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D HMPREF0733_10013 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D HMPREF0733_11691 glutamine synthetase, beta-grasp domain protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D HMPREF0733_10995 cah; carbonate dehydratase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] D HMPREF0733_11391 cah; carbonate dehydratase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] C 00920 Sulfur metabolism [PATH:rdn00920] D HMPREF0733_11156 ABC transporter, substrate-binding protein, aliphatic sulfonates family K15553 ssuA; sulfonate transport system substrate-binding protein D HMPREF0733_11155 putative aliphatic sulfonates transport permease protein SsuC K15554 ssuC; sulfonate transport system permease protein D HMPREF0733_11157 ABC transporter, ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D HMPREF0733_12157 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D HMPREF0733_12156 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D HMPREF0733_11517 metX; homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D HMPREF0733_11261 putative cystathionine beta-lyase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:rdn00061] D HMPREF0733_11485 Carbamoyl-phosphate synthase L chain, ATP binding domain protein K11263 bccA; acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14] D HMPREF0733_10609 putative acyl carrier protein K02078 acpP; acyl carrier protein D HMPREF0733_11810 putative acyl carrier protein K02078 acpP; acyl carrier protein D HMPREF0733_11808 [acyl-carrier-protein] S-malonyltransferase family protein K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D HMPREF0733_10606 fabHA; beta-ketoacyl-acyl-carrier-protein synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D HMPREF0733_11809 fabHA; beta-ketoacyl-acyl-carrier-protein synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D HMPREF0733_10608 putative beta-ketoacyl-acyl-carrier-protein synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D HMPREF0733_11811 fabF; beta-ketoacyl-acyl-carrier-protein synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D HMPREF0733_10610 oxidoreductase, short chain dehydrogenase/reductase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D HMPREF0733_11907 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D HMPREF0733_11908 oxidoreductase, short chain dehydrogenase/reductase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D HMPREF0733_10618 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D HMPREF0733_11612 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D HMPREF0733_11653 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:rdn00071] D HMPREF0733_10618 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D HMPREF0733_11612 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D HMPREF0733_11653 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D HMPREF0733_11029 adhP; alcohol dehydrogenase, propanol-preferring K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D HMPREF0733_11439 aldB; aldehyde dehydrogenase B K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00073 Cutin, suberine and wax biosynthesis C 00074 Mycolic acid biosynthesis [PATH:rdn00074] D HMPREF0733_11485 Carbamoyl-phosphate synthase L chain, ATP binding domain protein K11263 bccA; acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14] D HMPREF0733_10262 acpS; holo-[acyl-carrier-protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D HMPREF0733_10609 putative acyl carrier protein K02078 acpP; acyl carrier protein D HMPREF0733_11810 putative acyl carrier protein K02078 acpP; acyl carrier protein D HMPREF0733_11808 [acyl-carrier-protein] S-malonyltransferase family protein K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D HMPREF0733_11494 carboxyl transferase domain protein K27094 accD5; propionyl-CoA/long-chain acyl-CoA carboxylase carboxyl transferase subunit [EC:6.4.1.3 6.4.1.- 2.1.3.15] D HMPREF0733_11493 hypothetical protein K27095 accE5; acyl-CoA carboxylase epsilon subunit C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:rdn00561] D HMPREF0733_11439 aldB; aldehyde dehydrogenase B K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D HMPREF0733_11642 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D HMPREF0733_11617 HAD hydrolase, family IIA K06117 E3.1.3.21; glycerol-1-phosphatase [EC:3.1.3.21] D HMPREF0733_11655 Acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D HMPREF0733_11864 Acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 00564 Glycerophospholipid metabolism [PATH:rdn00564] D HMPREF0733_12142 putative glycerol-3-phosphate dehydrogenase [NAD(P)+] K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D HMPREF0733_11644 FAD dependent oxidoreductase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] D HMPREF0733_11655 Acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D HMPREF0733_11864 Acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D HMPREF0733_11469 cytidyltransferase-related domain protein K00980 tagD; glycerol-3-phosphate cytidylyltransferase [EC:2.7.7.39] D HMPREF0733_10790 Tat pathway signal sequence domain protein K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D HMPREF0733_11538 cdsA; phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D HMPREF0733_11575 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D HMPREF0733_11191 phospholipase D domain protein K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism C 01040 Biosynthesis of unsaturated fatty acids D HMPREF0733_12106 putative acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:rdn00230] D HMPREF0733_11414 prs; ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D HMPREF0733_10511 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D HMPREF0733_10504 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D HMPREF0733_11347 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D HMPREF0733_11213 purL; phosphoribosylformylglycinamidine synthase II K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3] D HMPREF0733_11215 purS; phosphoribosylformylglycinamidine synthase, purS protein K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3] D HMPREF0733_11214 purQ; phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D HMPREF0733_10512 purM; phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D HMPREF0733_11396 purK; phosphoribosylaminoimidazole carboxylase, ATPase subunit K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18] D HMPREF0733_11395 purE; phosphoribosylaminoimidazole carboxylase, catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D HMPREF0733_10503 purC; phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D HMPREF0733_10630 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D HMPREF0733_11348 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D HMPREF0733_11613 putative adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D HMPREF0733_11675 conserved hypothetical protein, YfiH family K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D HMPREF0733_10720 hpt; hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D HMPREF0733_10245 IMP dehydrogenase family protein K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D HMPREF0733_10246 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D HMPREF0733_12074 ndkA; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D HMPREF0733_11744 rdgB; non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D HMPREF0733_10234 guaA; GMP synthase (glutamine-hydrolyzing) domain protein K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D HMPREF0733_11986 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D HMPREF0733_12052 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D HMPREF0733_12051 ribonucleoside-diphosphate reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D HMPREF0733_11524 putative dGTPase K01129 dgt; dGTPase [EC:3.1.5.1] D HMPREF0733_12015 relA; GTP diphosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D HMPREF0733_10449 Ppx/GppA phosphatase family protein K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D HMPREF0733_11371 Ppx/GppA phosphatase family protein K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D HMPREF0733_11499 adenylate/guanylate cyclase catalytic domain protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1] D HMPREF0733_11122 purA; adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D HMPREF0733_10281 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D HMPREF0733_12027 histidine triad domain protein K19710 E2.7.7.53; ATP adenylyltransferase [EC:2.7.7.53] C 00240 Pyrimidine metabolism [PATH:rdn00240] D HMPREF0733_11989 carB; carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D HMPREF0733_11990 carA; carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D HMPREF0733_11993 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D HMPREF0733_11992 pyrC; dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D HMPREF0733_11920 pyrD; dihydroorotate oxidase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2] D HMPREF0733_10804 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D HMPREF0733_11988 pyrF; orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D HMPREF0733_11536 pyrH; UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D HMPREF0733_12074 ndkA; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D HMPREF0733_11486 maf; septum formation protein Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D HMPREF0733_11622 pyrG; CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2] D HMPREF0733_11631 cmk; cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D HMPREF0733_10648 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D HMPREF0733_11994 pyrR; pyrimidine operon regulatory protein/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D HMPREF0733_11311 dcd; dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D HMPREF0733_12052 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D HMPREF0733_12051 ribonucleoside-diphosphate reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D HMPREF0733_11260 tmk; dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D HMPREF0733_11766 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D HMPREF0733_10372 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D HMPREF0733_11240 nitroreductase family protein K09019 rutE; 3-hydroxypropanoate dehydrogenase [EC:1.1.1.-] D HMPREF0733_11241 nitroreductase family protein K09019 rutE; 3-hydroxypropanoate dehydrogenase [EC:1.1.1.-] D HMPREF0733_11242 nitroreductase family protein K09019 rutE; 3-hydroxypropanoate dehydrogenase [EC:1.1.1.-] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:rdn00250] D HMPREF0733_10350 aspC; aspartate transaminase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D HMPREF0733_10223 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] D HMPREF0733_10680 hypothetical protein K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D HMPREF0733_10204 aminotransferase, class I/II K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D HMPREF0733_11122 purA; adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D HMPREF0733_10630 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D HMPREF0733_11993 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D HMPREF0733_11936 gabT; 4-aminobutyrate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D HMPREF0733_11938 succinate-semialdehyde dehydrogenase [NAD(P)+] K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D HMPREF0733_10828 bacterial NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D HMPREF0733_11647 aldehyde dehydrogenase (NAD) family protein K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D HMPREF0733_10013 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D HMPREF0733_11691 glutamine synthetase, beta-grasp domain protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D HMPREF0733_11989 carB; carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D HMPREF0733_11990 carA; carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D HMPREF0733_12062 glsA; glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2] D HMPREF0733_11214 purQ; phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D HMPREF0733_10263 glmS; glutamine-fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D HMPREF0733_10511 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:rdn00260] D HMPREF0733_11217 aspartate kinase, monofunctional class K00928 lysC; aspartate kinase [EC:2.7.2.4] D HMPREF0733_10374 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D HMPREF0733_11706 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D HMPREF0733_11708 thrB; homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39] D HMPREF0733_11707 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D HMPREF0733_11350 glyA; glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D HMPREF0733_11263 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D HMPREF0733_10319 gcvP; glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D HMPREF0733_10318 gcvT; aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D HMPREF0733_10005 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D HMPREF0733_11648 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D HMPREF0733_11937 putative aminobutyraldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8] D HMPREF0733_10317 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D HMPREF0733_11381 ilvA; threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D HMPREF0733_11823 trpA; tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D HMPREF0733_11822 trpB; tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] C 00270 Cysteine and methionine metabolism [PATH:rdn00270] D HMPREF0733_12157 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D HMPREF0733_12156 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D HMPREF0733_11051 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D HMPREF0733_11983 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D HMPREF0733_11557 mtnN; MTA/SAH nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9] D HMPREF0733_11675 conserved hypothetical protein, YfiH family K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D HMPREF0733_11556 luxS; S-ribosylhomocysteinase LuxS K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21] D HMPREF0733_11217 aspartate kinase, monofunctional class K00928 lysC; aspartate kinase [EC:2.7.2.4] D HMPREF0733_10374 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D HMPREF0733_11706 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D HMPREF0733_11708 thrB; homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39] D HMPREF0733_11517 metX; homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D HMPREF0733_11261 putative cystathionine beta-lyase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D HMPREF0733_11133 O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] D HMPREF0733_11516 O-acetylhomoserine aminocarboxypropyltransferase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] D HMPREF0733_12186 ilvE; branched-chain-amino-acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D HMPREF0733_10350 aspC; aspartate transaminase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D HMPREF0733_11916 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D HMPREF0733_10317 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] C 00280 Valine, leucine and isoleucine degradation [PATH:rdn00280] D HMPREF0733_12186 ilvE; branched-chain-amino-acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D HMPREF0733_10605 putative pyruvate dehydrogenase E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D HMPREF0733_10625 dehydrogenase E1 component K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D HMPREF0733_10624 pdhB; pyruvate dehydrogenase E1 component subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D HMPREF0733_10604 pdhB; pyruvate dehydrogenase E1 component subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D HMPREF0733_10603 Biotin-requiring enzyme K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D HMPREF0733_10623 2-oxo acid dehydrogenase acyltransferase (catalytic domain) K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D HMPREF0733_10005 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D HMPREF0733_11485 Carbamoyl-phosphate synthase L chain, ATP binding domain protein K11263 bccA; acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14] D HMPREF0733_11494 carboxyl transferase domain protein K27094 accD5; propionyl-CoA/long-chain acyl-CoA carboxylase carboxyl transferase subunit [EC:6.4.1.3 6.4.1.- 2.1.3.15] D HMPREF0733_11493 hypothetical protein K27095 accE5; acyl-CoA carboxylase epsilon subunit D HMPREF0733_11439 aldB; aldehyde dehydrogenase B K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D HMPREF0733_11936 gabT; 4-aminobutyrate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:rdn00290] D HMPREF0733_11381 ilvA; threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D HMPREF0733_12146 leuC; 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D HMPREF0733_12145 leuD; 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D HMPREF0733_12188 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D HMPREF0733_12200 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D HMPREF0733_12199 ilvN; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D HMPREF0733_12198 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D HMPREF0733_11188 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D HMPREF0733_12186 ilvE; branched-chain-amino-acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D HMPREF0733_10204 aminotransferase, class I/II K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D HMPREF0733_11958 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:rdn00300] D HMPREF0733_11706 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D HMPREF0733_11217 aspartate kinase, monofunctional class K00928 lysC; aspartate kinase [EC:2.7.2.4] D HMPREF0733_10374 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D HMPREF0733_11572 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D HMPREF0733_11570 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D HMPREF0733_10133 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117] D HMPREF0733_10132 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D HMPREF0733_11585 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D HMPREF0733_11705 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D HMPREF0733_11666 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D HMPREF0733_11667 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:rdn00310] D HMPREF0733_10005 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D HMPREF0733_11936 gabT; 4-aminobutyrate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D HMPREF0733_11938 succinate-semialdehyde dehydrogenase [NAD(P)+] K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D HMPREF0733_11439 aldB; aldehyde dehydrogenase B K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00220 Arginine biosynthesis [PATH:rdn00220] D HMPREF0733_12062 glsA; glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2] D HMPREF0733_11214 purQ; phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D HMPREF0733_10013 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D HMPREF0733_11691 glutamine synthetase, beta-grasp domain protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D HMPREF0733_11989 carB; carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D HMPREF0733_11990 carA; carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D HMPREF0733_10828 bacterial NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D HMPREF0733_10350 aspC; aspartate transaminase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D HMPREF0733_10204 aminotransferase, class I/II K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D HMPREF0733_10844 argE; acetylornithine deacetylase ArgE K01438 argE; acetylornithine deacetylase [EC:3.5.1.16] C 00330 Arginine and proline metabolism [PATH:rdn00330] D HMPREF0733_11940 amine oxidase (flavin-containing) K03343 puo; putrescine oxidase [EC:1.4.3.10] D HMPREF0733_11439 aldB; aldehyde dehydrogenase B K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D HMPREF0733_10438 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D HMPREF0733_11647 aldehyde dehydrogenase (NAD) family protein K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D HMPREF0733_10802 ornithine cyclodeaminase K01750 E4.3.1.12; ornithine cyclodeaminase [EC:4.3.1.12] D HMPREF0733_10350 aspC; aspartate transaminase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] C 00340 Histidine metabolism [PATH:rdn00340] D HMPREF0733_11594 putative 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase K24017 priA; phosphoribosyl isomerase A [EC:5.3.1.16 5.3.1.24] D HMPREF0733_11592 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit family protein K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D HMPREF0733_10626 putative histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D HMPREF0733_10033 hisN; histidinol-phosphate phosphatase HisN K05602 hisN; histidinol-phosphatase [EC:3.1.3.15] D HMPREF0733_11439 aldB; aldehyde dehydrogenase B K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00350 Tyrosine metabolism [PATH:rdn00350] D HMPREF0733_10350 aspC; aspartate transaminase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D HMPREF0733_10626 putative histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D HMPREF0733_11029 adhP; alcohol dehydrogenase, propanol-preferring K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D HMPREF0733_11938 succinate-semialdehyde dehydrogenase [NAD(P)+] K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D HMPREF0733_12040 FAH family protein K16164 K16164; acylpyruvate hydrolase [EC:3.7.1.5] C 00360 Phenylalanine metabolism [PATH:rdn00360] D HMPREF0733_10601 enoyl-CoA hydratase/isomerase family protein K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18] D HMPREF0733_10350 aspC; aspartate transaminase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D HMPREF0733_10626 putative histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00380 Tryptophan metabolism [PATH:rdn00380] D HMPREF0733_10005 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D HMPREF0733_11439 aldB; aldehyde dehydrogenase B K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D HMPREF0733_10397 catalase K03781 katE; catalase [EC:1.11.1.6] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:rdn00400] D HMPREF0733_11656 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D HMPREF0733_11998 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D HMPREF0733_10468 aroQ; 3-dehydroquinate dehydratase, type II K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D HMPREF0733_11999 aroK; shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D HMPREF0733_10031 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D HMPREF0733_12000 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D HMPREF0733_11818 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D HMPREF0733_11931 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D HMPREF0733_11594 putative 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase K24017 priA; phosphoribosyl isomerase A [EC:5.3.1.16 5.3.1.24] D HMPREF0733_11821 trpC; indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48] D HMPREF0733_11823 trpA; tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D HMPREF0733_11822 trpB; tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D HMPREF0733_10069 chorismate mutase K04092 tyrA1; chorismate mutase [EC:5.4.99.5] D HMPREF0733_11630 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D HMPREF0733_10755 prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51] D HMPREF0733_10350 aspC; aspartate transaminase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D HMPREF0733_10626 putative histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:rdn00410] D HMPREF0733_11936 gabT; 4-aminobutyrate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D HMPREF0733_11439 aldB; aldehyde dehydrogenase B K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D HMPREF0733_10707 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] C 00430 Taurine and hypotaurine metabolism [PATH:rdn00430] D HMPREF0733_10828 bacterial NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D HMPREF0733_10759 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D HMPREF0733_10746 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] C 00440 Phosphonate and phosphinate metabolism C 00450 Selenocompound metabolism [PATH:rdn00450] D HMPREF0733_11261 putative cystathionine beta-lyase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D HMPREF0733_11051 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D HMPREF0733_11444 sufS; cysteine desulfurase, SufS subfamily K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D HMPREF0733_10913 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D HMPREF0733_12196 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:rdn00460] D HMPREF0733_10680 hypothetical protein K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D HMPREF0733_11350 glyA; glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:rdn00470] D HMPREF0733_10256 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D HMPREF0733_12141 D-ala D-ala ligase N-terminal domain protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D HMPREF0733_12062 glsA; glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2] D HMPREF0733_11214 purQ; phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D HMPREF0733_11741 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D HMPREF0733_11669 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D HMPREF0733_10223 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] D HMPREF0733_11585 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D HMPREF0733_11705 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] C 00480 Glutathione metabolism [PATH:rdn00480] D HMPREF0733_10251 carboxylate-amine ligase, YbdK family K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-] D HMPREF0733_10004 cytosol aminopeptidase family, catalytic domain protein K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D HMPREF0733_11914 pepN; membrane alanyl aminopeptidase K01256 pepN; aminopeptidase N [EC:3.4.11.2] D HMPREF0733_12102 pepN; membrane alanyl aminopeptidase K01256 pepN; aminopeptidase N [EC:3.4.11.2] D HMPREF0733_12158 gnd; phosphogluconate dehydrogenase (decarboxylating) K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D HMPREF0733_11884 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis [PATH:rdn00515] D HMPREF0733_11402 dolichyl-phosphate-mannose-protein mannosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109] C 00514 Other types of O-glycan biosynthesis [PATH:rdn00514] D HMPREF0733_11402 dolichyl-phosphate-mannose-protein mannosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109] C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation C 00540 Lipopolysaccharide biosynthesis C 00542 O-Antigen repeat unit biosynthesis C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:rdn00541] D HMPREF0733_10210 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D HMPREF0733_10134 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D HMPREF0733_10049 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D HMPREF0733_11435 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D HMPREF0733_11436 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D HMPREF0733_11437 rfbD; dTDP-4-dehydrorhamnose reductase K23987 rfbCD; dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:5.1.3.13 1.1.1.133] D HMPREF0733_11253 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D HMPREF0733_11252 manB; phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D HMPREF0733_11358 putative mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D HMPREF0733_11413 glmU; UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] C 00550 Peptidoglycan biosynthesis [PATH:rdn00550] D HMPREF0733_12144 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D HMPREF0733_10383 UDP-N-acetylenolpyruvoylglucosamine reductase domain protein K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D HMPREF0733_11672 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D HMPREF0733_11669 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D HMPREF0733_11666 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D HMPREF0733_12141 D-ala D-ala ligase N-terminal domain protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D HMPREF0733_11667 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D HMPREF0733_11919 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D HMPREF0733_11957 uppP; undecaprenyl-diphosphatase UppP K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D HMPREF0733_11668 putative phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D HMPREF0733_11671 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D HMPREF0733_11665 penicillin-binding protein, transpeptidase domain protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D HMPREF0733_10948 putative penicillin-binding protein A K05364 pbpA; penicillin-binding protein A D HMPREF0733_10727 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D HMPREF0733_10266 serine-type D-Ala-D-Ala carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D HMPREF0733_12024 Mur ligase middle domain protein K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13] D HMPREF0733_12023 CobB/CobQ-like protein K07009 gatD; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13] C 00552 Teichoic acid biosynthesis [PATH:rdn00552] D HMPREF0733_11957 uppP; undecaprenyl-diphosphatase UppP K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium [PATH:rdn00572] D HMPREF0733_10048 glycosyltransferase, group 2 family protein K16650 glft2; galactofuranosylgalactofuranosylrhamnosyl-N-acetylglucosaminyl-diphospho-decaprenol beta-1,5/1,6-galactofuranosyltransferase [EC:2.4.1.288] C 00543 Exopolysaccharide biosynthesis [PATH:rdn00543] D HMPREF0733_12157 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:rdn00730] D HMPREF0733_11853 thiD; phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D HMPREF0733_10071 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D HMPREF0733_11309 thiO; glycine oxidase ThiO K03153 thiO; glycine oxidase [EC:1.4.3.19] D HMPREF0733_11775 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D HMPREF0733_11307 thiG; thiazole biosynthesis protein ThiG K03149 thiG; thiazole synthase [EC:2.8.1.10] D HMPREF0733_11310 putative thiamine-phosphate diphosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D HMPREF0733_12138 putative thiamine-phosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16] D HMPREF0733_10032 putative ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D HMPREF0733_10281 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:rdn00740] D HMPREF0733_11816 putative GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D HMPREF0733_11814 ribD; riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D HMPREF0733_11815 ribE; riboflavin synthase, alpha subunit K02858 ribB; 3,4-dihydroxy 2-butanone 4-phosphate synthase [EC:4.1.99.12] D HMPREF0733_11817 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D HMPREF0733_11554 ribF; riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] C 00750 Vitamin B6 metabolism [PATH:rdn00750] D HMPREF0733_11707 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D HMPREF0733_11099 pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6] D HMPREF0733_11098 pdxT; pyridoxal 5'-phosphate synthase, glutaminase subunit Pdx2 K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6] C 00760 Nicotinate and nicotinamide metabolism [PATH:rdn00760] D HMPREF0733_11738 pncB; nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D HMPREF0733_12066 nadD; nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D HMPREF0733_10143 hydrolase, NUDIX family K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22] D HMPREF0733_11114 nadE; NAD+ synthase K01916 nadE; NAD+ synthase [EC:6.3.1.5] D HMPREF0733_11576 competence/damage-inducible domain protein CinA K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42] D HMPREF0733_11737 isochorismatase family protein K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-] D HMPREF0733_11620 ppnK; inorganic polyphosphate/ATP-NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] D HMPREF0733_11938 succinate-semialdehyde dehydrogenase [NAD(P)+] K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00770 Pantothenate and CoA biosynthesis [PATH:rdn00770] D HMPREF0733_12200 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D HMPREF0733_12199 ilvN; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D HMPREF0733_12198 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D HMPREF0733_11188 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D HMPREF0733_11688 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D HMPREF0733_10707 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D HMPREF0733_10264 coaA; pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33] D HMPREF0733_11984 coaBC; phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D HMPREF0733_12134 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D HMPREF0733_11834 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D HMPREF0733_10262 acpS; holo-[acyl-carrier-protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D HMPREF0733_10854 4'-phosphopantetheinyl transferase family protein K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-] D HMPREF0733_10556 4'-phosphopantetheinyl transferase family protein K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-] D HMPREF0733_12186 ilvE; branched-chain-amino-acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D HMPREF0733_11439 aldB; aldehyde dehydrogenase B K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00780 Biotin metabolism [PATH:rdn00780] D HMPREF0733_10608 putative beta-ketoacyl-acyl-carrier-protein synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D HMPREF0733_11811 fabF; beta-ketoacyl-acyl-carrier-protein synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D HMPREF0733_10610 oxidoreductase, short chain dehydrogenase/reductase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D HMPREF0733_11907 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D HMPREF0733_11908 oxidoreductase, short chain dehydrogenase/reductase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D HMPREF0733_11497 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:rdn00785] D HMPREF0733_10009 lipB; lipoyl(octanoyl) transferase K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181] D HMPREF0733_10010 lipA; lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8] D HMPREF0733_12041 hypothetical protein K16869 lipL; octanoyl-[GcvH]:protein N-octanoyltransferase [EC:2.3.1.204] D HMPREF0733_10005 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D HMPREF0733_12159 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D HMPREF0733_10006 sucB; 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D HMPREF0733_10027 sucA; oxoglutarate dehydrogenase (succinyl-transferring), E1 component K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61] D HMPREF0733_10605 putative pyruvate dehydrogenase E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D HMPREF0733_10625 dehydrogenase E1 component K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D HMPREF0733_10624 pdhB; pyruvate dehydrogenase E1 component subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D HMPREF0733_10604 pdhB; pyruvate dehydrogenase E1 component subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D HMPREF0733_10603 Biotin-requiring enzyme K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D HMPREF0733_10623 2-oxo acid dehydrogenase acyltransferase (catalytic domain) K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D HMPREF0733_10319 gcvP; glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D HMPREF0733_10318 gcvT; aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D HMPREF0733_11648 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:rdn00790] D HMPREF0733_10717 folE; GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16] D HMPREF0733_10713 folB; dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D HMPREF0733_10712 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D HMPREF0733_10714 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D HMPREF0733_10373 folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D HMPREF0733_12077 folC; bifunctional protein FolC K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D HMPREF0733_11816 putative GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D HMPREF0733_10945 glutamine amidotransferase, class I K01664 pabA; para-aminobenzoate synthetase component II [EC:2.6.1.85] D HMPREF0733_10807 pabB; aminodeoxychorismate synthase, component I K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85] D HMPREF0733_11319 aminotransferase, class IV K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38] D HMPREF0733_10332 moaA; molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D HMPREF0733_10328 moaC; molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D HMPREF0733_10326 moaE; molybdopterin converting factor, subunit 2 K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D HMPREF0733_10329 molybdopterin binding domain protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D HMPREF0733_10335 molybdopterin binding domain protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] C 00670 One carbon pool by folate [PATH:rdn00670] D HMPREF0733_10373 folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D HMPREF0733_12047 fhs; formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3] D HMPREF0733_11351 folD; tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain protein K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D HMPREF0733_11350 glyA; glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D HMPREF0733_11347 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D HMPREF0733_11348 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D HMPREF0733_12176 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D HMPREF0733_10318 gcvT; aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D HMPREF0733_10372 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D HMPREF0733_11052 methylenetetrahydrofolate reductase (NAD(P)H) K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D HMPREF0733_10211 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:rdn00860] D HMPREF0733_10416 gluQ; glutamyl-queuosine tRNA(Asp) synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D HMPREF0733_12184 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D HMPREF0733_10116 hemA; glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70] D HMPREF0733_10102 hemL; glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D HMPREF0733_10108 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D HMPREF0733_10110 hemC; hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D HMPREF0733_10109 hemD; uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75] D HMPREF0733_10115 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] D HMPREF0733_10114 hemG; protoporphyrinogen oxidase K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15] D HMPREF0733_10111 ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] D HMPREF0733_12086 cobA; uroporphyrinogen-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107] D HMPREF0733_11887 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D HMPREF0733_11888 cytochrome oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9] D HMPREF0733_11210 hmuO; heme oxygenase K21480 HO; heme oxygenase (biliverdin-producing, ferredoxin) [EC:1.14.15.20] D HMPREF0733_10957 ferritin-like protein K22336 bfrB; bacterioferritin B [EC:1.16.3.1] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:rdn00130] D HMPREF0733_10407 ubiE; ubiquinone/menaquinone biosynthesis methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D HMPREF0733_10557 putative isochorismate synthase K02361 entC; isochorismate synthase [EC:5.4.4.2] D HMPREF0733_10414 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9] D HMPREF0733_10413 mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113] D HMPREF0733_10423 AMP-binding enzyme K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26] D HMPREF0733_10422 menB; naphthoate synthase K01661 menB; naphthoate synthase [EC:4.1.3.36] D HMPREF0733_10424 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] D HMPREF0733_11633 flavodoxin-like protein K00355 NQO1; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:rdn00900] D HMPREF0733_11775 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D HMPREF0733_11540 dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D HMPREF0733_11267 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] D HMPREF0733_11408 putative 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D HMPREF0733_11268 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] D HMPREF0733_11542 ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D HMPREF0733_10200 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D HMPREF0733_11659 polyprenyl synthetase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29] D HMPREF0733_11386 di-trans,poly-cis-decaprenylcistransferase-like protein K12503 uppS; short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68] D HMPREF0733_11919 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation D HMPREF0733_11439 aldB; aldehyde dehydrogenase B K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00907 Pinene, camphor and geraniol degradation C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D HMPREF0733_11886 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis [PATH:rdn00523] D HMPREF0733_11435 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D HMPREF0733_11436 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D HMPREF0733_11437 rfbD; dTDP-4-dehydrorhamnose reductase K23987 rfbCD; dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:5.1.3.13 1.1.1.133] C 01054 Nonribosomal peptide structures [PATH:rdn01054] D HMPREF0733_10223 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] C 01053 Biosynthesis of siderophore group nonribosomal peptides [PATH:rdn01053] D HMPREF0733_10557 putative isochorismate synthase K02361 entC; isochorismate synthase [EC:5.4.4.2] D HMPREF0733_10558 oxidoreductase, short chain dehydrogenase/reductase family protein K00216 entA; 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase [EC:1.3.1.28] D HMPREF0733_12164 putative (2,3-dihydroxybenzoyl)adenylate synthase K02363 entE; 2,3-dihydroxybenzoate---[aryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.71] D HMPREF0733_12162 AMP-binding enzyme K02364 entF; L-serine---[L-seryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.72] C 01055 Biosynthesis of vancomycin group antibiotics D HMPREF0733_11436 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis C 00332 Carbapenem biosynthesis C 00261 Monobactam biosynthesis [PATH:rdn00261] D HMPREF0733_11217 aspartate kinase, monofunctional class K00928 lysC; aspartate kinase [EC:2.7.2.4] D HMPREF0733_10374 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D HMPREF0733_11572 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D HMPREF0733_11570 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:rdn00521] D HMPREF0733_11435 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D HMPREF0733_11436 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D HMPREF0733_11437 rfbD; dTDP-4-dehydrorhamnose reductase K23987 rfbCD; dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:5.1.3.13 1.1.1.133] C 00524 Neomycin, kanamycin and gentamicin biosynthesis C 00525 Acarbose and validamycin biosynthesis [PATH:rdn00525] D HMPREF0733_11435 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D HMPREF0733_11436 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis [PATH:rdn00401] D HMPREF0733_11630 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D HMPREF0733_10350 aspC; aspartate transaminase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D HMPREF0733_10626 putative histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis D HMPREF0733_11818 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis D HMPREF0733_11808 [acyl-carrier-protein] S-malonyltransferase family protein K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D HMPREF0733_10610 oxidoreductase, short chain dehydrogenase/reductase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D HMPREF0733_11907 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D HMPREF0733_11908 oxidoreductase, short chain dehydrogenase/reductase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D HMPREF0733_10609 putative acyl carrier protein K02078 acpP; acyl carrier protein D HMPREF0733_11810 putative acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites D HMPREF0733_11983 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:rdn00362] D HMPREF0733_10823 carboxymuconolactone decarboxylase family protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44] D HMPREF0733_11244 2Fe-2S iron-sulfur cluster binding domain protein K04755 fdx; ferredoxin, 2Fe-2S C 00627 Aminobenzoate degradation D HMPREF0733_11146 putative acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] C 00364 Fluorobenzoate degradation C 00625 Chloroalkane and chloroalkene degradation [PATH:rdn00625] D HMPREF0733_11029 adhP; alcohol dehydrogenase, propanol-preferring K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D HMPREF0733_11439 aldB; aldehyde dehydrogenase B K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00361 Chlorocyclohexane and chlorobenzene degradation C 00623 Toluene degradation C 00622 Xylene degradation C 00633 Nitrotoluene degradation C 00642 Ethylbenzene degradation C 00643 Styrene degradation C 00791 Atrazine degradation C 00930 Caprolactam degradation C 00363 Bisphenol degradation C 00621 Dioxin degradation C 00626 Naphthalene degradation [PATH:rdn00626] D HMPREF0733_11029 adhP; alcohol dehydrogenase, propanol-preferring K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:rdn03020] D HMPREF0733_10313 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D HMPREF0733_10312 rpoC; DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D HMPREF0733_10274 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D HMPREF0733_11985 rpoZ; DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:rdn03010] D HMPREF0733_11833 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D HMPREF0733_11534 rpsB; ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D HMPREF0733_10297 rpsC; ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D HMPREF0733_12008 rpsD; ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D HMPREF0733_10285 rpsE; ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D HMPREF0733_10921 rpsF; ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D HMPREF0733_10310 rpsG; ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D HMPREF0733_10288 rpsH; ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D HMPREF0733_10270 rpsI; ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D HMPREF0733_10304 rpsJ; ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D HMPREF0733_10275 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D HMPREF0733_10311 rpsL; ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D HMPREF0733_10276 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D HMPREF0733_11278 rpsN; ribosomal protein S14p/S29e K02954 RP-S14; small subunit ribosomal protein S14 D HMPREF0733_11560 rpsO; ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D HMPREF0733_12119 rpsP; ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D HMPREF0733_10294 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D HMPREF0733_10923 rpsR; ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D HMPREF0733_10299 rpsS; ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D HMPREF0733_11971 rpsT; ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D HMPREF0733_10345 rplA; ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D HMPREF0733_10300 rplB; ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D HMPREF0733_10303 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D HMPREF0733_10302 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D HMPREF0733_10289 rplE; ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D HMPREF0733_10287 rplF; ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D HMPREF0733_10341 rplL; ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D HMPREF0733_10924 rplI; ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D HMPREF0733_10342 rplJ; ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D HMPREF0733_10346 rplK; ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D HMPREF0733_10271 rplM; ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D HMPREF0733_10291 rplN; ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D HMPREF0733_10283 rplO; ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D HMPREF0733_10296 rplP; ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D HMPREF0733_10273 rplQ; ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D HMPREF0733_10286 rplR; ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D HMPREF0733_11799 rplS; ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D HMPREF0733_11599 rplT; ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D HMPREF0733_12070 rplU; ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D HMPREF0733_10298 rplV; ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D HMPREF0733_10301 rplW; ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D HMPREF0733_10290 rplX; ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D HMPREF0733_11441 ribosomal L25p family protein K02897 RP-L25; large subunit ribosomal protein L25 D HMPREF0733_12069 rpmA; ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D HMPREF0733_11276 rpmB; ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D HMPREF0733_10295 rpmC; ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D HMPREF0733_10284 rpmD; ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D HMPREF0733_11911 rpmE; ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D HMPREF0733_12132 rpmF; ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D HMPREF0733_11277 rpmG; ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D HMPREF0733_10903 rpmH; ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D HMPREF0733_11598 rpmI; ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D HMPREF0733_10277 rpmJ; ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D HMPREF0733_r10003 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D HMPREF0733_r10008 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D HMPREF0733_r10005 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D HMPREF0733_r10004 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D HMPREF0733_r10006 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D HMPREF0733_r10009 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D HMPREF0733_r10001 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D HMPREF0733_r10002 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D HMPREF0733_r10007 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D HMPREF0733_r10010 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:rdn00970] D HMPREF0733_t10014 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D HMPREF0733_t10015 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D HMPREF0733_t10039 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D HMPREF0733_t10022 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D HMPREF0733_t10036 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D HMPREF0733_t10008 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D HMPREF0733_t10030 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D HMPREF0733_t10027 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D HMPREF0733_t10019 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D HMPREF0733_t10032 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D HMPREF0733_t10045 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D HMPREF0733_t10026 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D HMPREF0733_t10034 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D HMPREF0733_t10044 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D HMPREF0733_t10018 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D HMPREF0733_t10041 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D HMPREF0733_t10024 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D HMPREF0733_t10031 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D HMPREF0733_t10046 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D HMPREF0733_t10035 tRNA-His K14226 tRNA-His; tRNA His D HMPREF0733_t10016 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D HMPREF0733_t10049 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D HMPREF0733_t10017 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D HMPREF0733_t10037 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D HMPREF0733_t10038 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D HMPREF0733_t10025 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D HMPREF0733_t10013 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D HMPREF0733_t10048 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D HMPREF0733_t10047 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D HMPREF0733_t10028 tRNA-Met K14230 tRNA-Met; tRNA Met D HMPREF0733_t10001 tRNA-Met K14230 tRNA-Met; tRNA Met D HMPREF0733_t10004 tRNA-Met K14230 tRNA-Met; tRNA Met D HMPREF0733_t10020 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D HMPREF0733_t10040 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D HMPREF0733_t10029 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D HMPREF0733_t10007 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D HMPREF0733_t10011 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D HMPREF0733_t10021 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D HMPREF0733_t10010 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D HMPREF0733_t10012 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D HMPREF0733_t10003 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D HMPREF0733_t10005 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D HMPREF0733_t10009 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D HMPREF0733_t10023 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D HMPREF0733_t10002 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D HMPREF0733_t10006 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D HMPREF0733_t10043 tRNA-Val K14237 tRNA-Val; tRNA Val D HMPREF0733_t10033 tRNA-Val K14237 tRNA-Val; tRNA Val D HMPREF0733_t10042 tRNA-Val K14237 tRNA-Val; tRNA Val D HMPREF0733_10416 gluQ; glutamyl-queuosine tRNA(Asp) synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D HMPREF0733_12184 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D HMPREF0733_11504 gatA; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D HMPREF0733_11505 gatB; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D HMPREF0733_11503 gatC; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D HMPREF0733_12004 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D HMPREF0733_12012 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D HMPREF0733_11521 glyS; glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D HMPREF0733_12034 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D HMPREF0733_10754 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D HMPREF0733_11269 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D HMPREF0733_12196 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D HMPREF0733_12176 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D HMPREF0733_12092 Anticodon-binding domain protein K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D HMPREF0733_11977 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D HMPREF0733_12078 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D HMPREF0733_10706 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D HMPREF0733_10955 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D HMPREF0733_11703 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D HMPREF0733_11544 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D HMPREF0733_12013 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D HMPREF0733_11607 pheS; phenylalanine--tRNA ligase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D HMPREF0733_11608 pheT; phenylalanine--tRNA ligase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D HMPREF0733_11615 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D HMPREF0733_11355 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:rdn03060] D HMPREF0733_10282 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY D HMPREF0733_10349 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE D HMPREF0733_11877 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG D HMPREF0733_12017 secD; export membrane protein SecD K03072 secD; preprotein translocase subunit SecD D HMPREF0733_12016 secF; export membrane protein SecF K03074 secF; preprotein translocase subunit SecF D HMPREF0733_12018 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC D HMPREF0733_10907 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase D HMPREF0733_10062 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D HMPREF0733_12122 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D HMPREF0733nc10003 Bacterial signal recognition particle RNA K01983 ffs; SRP RNA D HMPREF0733_12124 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D HMPREF0733_11946 tatA; twin arginine-targeting protein translocase, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA D HMPREF0733_10128 sec-independent translocase family protein K03117 tatB; sec-independent protein translocase protein TatB D HMPREF0733_11945 putative twin arginine-targeting protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC D HMPREF0733_11800 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D HMPREF0733_11801 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D HMPREF0733_11681 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:rdn04122] D HMPREF0733_10071 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D HMPREF0733_10070 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D HMPREF0733_10326 moaE; molybdopterin converting factor, subunit 2 K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D HMPREF0733_10332 moaA; molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D HMPREF0733_10333 ThiS family protein K03636 moaD; sulfur-carrier protein D HMPREF0733_11306 ThiF family protein K21147 moeZR; sulfur-carrier protein adenylyltransferase/sulfurtransferase [EC:2.7.7.80 2.7.7.- 2.8.1.11 2.8.1.-] D HMPREF0733_10325 molybdopterin biosynthesis-like protein MoeZ K21147 moeZR; sulfur-carrier protein adenylyltransferase/sulfurtransferase [EC:2.7.7.80 2.7.7.- 2.8.1.11 2.8.1.-] D HMPREF0733_10328 moaC; molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D HMPREF0733_11308 thiS; thiamine biosynthesis protein ThiS K03154 thiS; sulfur carrier protein C 03050 Proteasome D HMPREF0733_11954 arc; proteasome ATPase K13527 mpa; proteasome-associated ATPase C 03018 RNA degradation [PATH:rdn03018] D HMPREF0733_12071 S1 RNA binding domain protein K08300 rne; ribonuclease E [EC:3.1.26.12] D HMPREF0733_11367 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D HMPREF0733_11561 gpsI; guanosine pentaphosphate synthetase I/polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D HMPREF0733_10388 deaD; cold-shock DEAD-box protein A K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D HMPREF0733_10665 ATP-dependent DNA helicase, RecQ family K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D HMPREF0733_11710 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D HMPREF0733_11573 hypothetical protein K12574 rnj; ribonuclease J [EC:3.1.-.-] D HMPREF0733_11327 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D HMPREF0733_10247 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D HMPREF0733_10572 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D HMPREF0733_10356 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D HMPREF0733_10269 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D HMPREF0733_10917 tRNA adenylyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:rdn03030] D HMPREF0733_10094 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D HMPREF0733_11855 exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D HMPREF0733_11683 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D HMPREF0733_11219 dnaX; DNA polymerase III, subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D HMPREF0733_11259 putative DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D HMPREF0733_11973 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D HMPREF0733_10901 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D HMPREF0733_10933 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D HMPREF0733_11525 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D HMPREF0733_10922 single-strand binding family protein K03111 ssb; single-strand DNA-binding protein D HMPREF0733_11795 single-strand binding family protein K03111 ssb; single-strand DNA-binding protein D HMPREF0733_10555 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D HMPREF0733_11802 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D HMPREF0733_11501 ligA; DNA ligase (NAD+) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:rdn03410] D HMPREF0733_10467 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D HMPREF0733_10575 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D HMPREF0733_10699 putative A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D HMPREF0733_12130 mutM; DNA-formamidopyrimidine glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D HMPREF0733_12099 Formamidopyrimidine-DNA glycosylase H2TH domain protein K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18] D HMPREF0733_11636 tag; DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D HMPREF0733_10740 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D HMPREF0733_11354 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D HMPREF0733_11501 ligA; DNA ligase (NAD+) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:rdn03420] D HMPREF0733_11480 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D HMPREF0733_12045 uvrA; excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A D HMPREF0733_11837 uvrB; excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B D HMPREF0733_11865 uvrC; excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C D HMPREF0733_10090 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D HMPREF0733_10092 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D HMPREF0733_10538 pcrA; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D HMPREF0733_11501 ligA; DNA ligase (NAD+) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03430 Mismatch repair [PATH:rdn03430] D HMPREF0733_10090 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D HMPREF0733_10092 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D HMPREF0733_10538 pcrA; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D HMPREF0733_10202 xseA; exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D HMPREF0733_10203 xseB; exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D HMPREF0733_10922 single-strand binding family protein K03111 ssb; single-strand DNA-binding protein D HMPREF0733_11795 single-strand binding family protein K03111 ssb; single-strand DNA-binding protein D HMPREF0733_11683 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D HMPREF0733_10901 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D HMPREF0733_11219 dnaX; DNA polymerase III, subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D HMPREF0733_11973 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D HMPREF0733_11259 putative DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D HMPREF0733_10094 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D HMPREF0733_11855 exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D HMPREF0733_11501 ligA; DNA ligase (NAD+) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03440 Homologous recombination [PATH:rdn03440] D HMPREF0733_10922 single-strand binding family protein K03111 ssb; single-strand DNA-binding protein D HMPREF0733_11795 single-strand binding family protein K03111 ssb; single-strand DNA-binding protein D HMPREF0733_10900 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF D HMPREF0733_11918 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D HMPREF0733_11218 recR; recombination protein RecR K06187 recR; recombination protein RecR D HMPREF0733_11579 recA; RecA protein K03553 recA; recombination protein RecA D HMPREF0733_12020 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D HMPREF0733_12019 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D HMPREF0733_12021 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D HMPREF0733_10962 divergent AAA domain protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D HMPREF0733_10631 divergent AAA domain protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D HMPREF0733_12136 putative ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D HMPREF0733_11683 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D HMPREF0733_10901 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D HMPREF0733_11219 dnaX; DNA polymerase III, subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D HMPREF0733_11973 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D HMPREF0733_11259 putative DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D HMPREF0733_10094 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D HMPREF0733_11855 exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D HMPREF0733_11982 putative primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 [PATH:rdn03250] D HMPREF0733_10888 cypB; peptidyl-prolyl cis-trans isomerase B K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus C 03272 Virion - Hepatitis viruses C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:rdn02010] D HMPREF0733_11156 ABC transporter, substrate-binding protein, aliphatic sulfonates family K15553 ssuA; sulfonate transport system substrate-binding protein D HMPREF0733_11155 putative aliphatic sulfonates transport permease protein SsuC K15554 ssuC; sulfonate transport system permease protein D HMPREF0733_11157 ABC transporter, ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D HMPREF0733_10331 modA; molybdate ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein D HMPREF0733_10330 ABC transporter, permease protein K02018 modB; molybdate transport system permease protein D HMPREF0733_10205 ABC transporter, substrate-binding protein, QAT family K05845 opuC; osmoprotectant transport system substrate-binding protein D HMPREF0733_11185 Tat pathway signal sequence domain protein K05845 opuC; osmoprotectant transport system substrate-binding protein D HMPREF0733_11183 ABC transporter, permease protein K05846 opuBD; osmoprotectant transport system permease protein D HMPREF0733_11184 ABC transporter, permease protein K05846 opuBD; osmoprotectant transport system permease protein D HMPREF0733_11182 ABC transporter, ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D HMPREF0733_10136 putative ABC transporter glutamine-binding protein GlnH K10005 gluB; glutamate transport system substrate-binding protein D HMPREF0733_10137 ABC transporter, permease protein K10006 gluC; glutamate transport system permease protein D HMPREF0733_10138 ABC transporter, permease protein K10007 gluD; glutamate transport system permease protein D HMPREF0733_10135 gluA; glutamate ABC transporter, ATP-binding protein GluA K10008 gluA; glutamate transport system ATP-binding protein [EC:7.4.2.1] D HMPREF0733_10598 putative D-methionine-binding lipoprotein MetQ K02073 metQ; D-methionine transport system substrate-binding protein D HMPREF0733_10595 ABC transporter, permease protein K02072 metI; D-methionine transport system permease protein D HMPREF0733_10596 ABC transporter, ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein D HMPREF0733_11199 Tat pathway signal sequence domain protein K13889 gsiB; glutathione transport system substrate-binding protein D HMPREF0733_11198 ABC transporter, substrate-binding protein, family 5 K13889 gsiB; glutathione transport system substrate-binding protein D HMPREF0733_11195 ABC transporter, permease protein K13890 gsiC; glutathione transport system permease protein D HMPREF0733_11196 ABC transporter, permease protein K13891 gsiD; glutathione transport system permease protein D HMPREF0733_11197 putative phosphonate C-P lyase system protein PhnK K13892 gsiA; glutathione transport system ATP-binding protein D HMPREF0733_11130 periplasmic binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein D HMPREF0733_12173 Tat pathway signal sequence domain protein K25286 fagD; iron-siderophore transport system substrate-binding protein D HMPREF0733_11128 fepD; ferric enterobactin transport system permease protein FepD K23186 fepD; iron-siderophore transport system permease protein D HMPREF0733_12168 putative ferric enterobactin transport system permease protein FepD K23186 fepD; iron-siderophore transport system permease protein D HMPREF0733_11127 putative ferric enterobactin transport system permease protein FepG K23187 fepG; iron-siderophore transport system permease protein D HMPREF0733_12167 putative ferric enterobactin transport system permease protein FepG K23187 fepG; iron-siderophore transport system permease protein D HMPREF0733_11274 fhuC; ferrichrome ABC transporter, ATP-binding protein FhuC K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-] D HMPREF0733_12166 fhuC; ferrichrome ABC transporter, ATP-binding protein FhuC K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-] D HMPREF0733_10736 sitA; iron/manganese ABC transporter, periplasmic iron/manganese-binding protein K11601 mntC; manganese transport system substrate-binding protein D HMPREF0733_10734 putative iron/manganese ABC transporter, permease protein K11602 mntB; manganese transport system permease protein D HMPREF0733_10735 mntA; manganese transport system ATP-binding protein MntA K11603 mntA; manganese transport system ATP-binding protein [EC:7.2.2.5] D HMPREF0733_11901 BioY family protein K03523 bioY; biotin transport system substrate-specific component D HMPREF0733_11899 cobalt transport protein K16783 bioN; biotin transport system permease protein D HMPREF0733_11900 ABC transporter, ATP-binding protein K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-] D HMPREF0733_11318 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein D HMPREF0733_11752 cydC; thiol reductant ABC exporter, CydC subunit K16014 cydCD; ATP-binding cassette, subfamily C, bacterial CydCD C 02060 Phosphotransferase system (PTS) [PATH:rdn02060] D HMPREF0733_10580 ptsP; phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D HMPREF0733_10579 phosphocarrier, HPr family K02784 ptsH; phosphocarrier protein HPr D HMPREF0733_10792 putative glucose-specific phosphotransferase enzyme IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D HMPREF0733_10339 PTS system sucrose-specific IIBC component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211] D HMPREF0733_11204 phosphotransferase system, EIIB K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-] D HMPREF0733_10217 glvC; PTS system maltose-specific EIICB component K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-] D HMPREF0733_10872 manX; PTS system mannose-specific EIIAB component K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191] D HMPREF0733_10873 PTS system, mannose/fructose/sorbose family, IIC component K02795 manY; mannose PTS system EIIC component D HMPREF0733_10874 manZ; mannose permease IID component K02796 manZ; mannose PTS system EIID component D HMPREF0733_10581 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D HMPREF0733_10582 hexose kinase, 1-phosphofructokinase family K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] C 03070 Bacterial secretion system [PATH:rdn03070] D HMPREF0733_12017 secD; export membrane protein SecD K03072 secD; preprotein translocase subunit SecD D HMPREF0733_12016 secF; export membrane protein SecF K03074 secF; preprotein translocase subunit SecF D HMPREF0733_10349 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE D HMPREF0733_11877 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG D HMPREF0733_10282 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY D HMPREF0733_12018 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC D HMPREF0733_10907 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase D HMPREF0733_10062 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D HMPREF0733_12124 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D HMPREF0733_12122 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D HMPREF0733_11946 tatA; twin arginine-targeting protein translocase, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA D HMPREF0733_10128 sec-independent translocase family protein K03117 tatB; sec-independent protein translocase protein TatB D HMPREF0733_11945 putative twin arginine-targeting protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC B B 09132 Signal transduction C 02020 Two-component system [PATH:rdn02020] D HMPREF0733_11264 putative signal-transduction histidine kinase senX3 K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3] D HMPREF0733_11265 regX; sensory transduction protein RegX3 K07776 regX3; two-component system, OmpR family, response regulator RegX3 D HMPREF0733_11888 cytochrome oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9] D HMPREF0733_10076 trypsin K08372 pepD; putative serine protease PepD [EC:3.4.21.-] D HMPREF0733_10066 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3] D HMPREF0733_10067 mtrA; DNA-binding response regulator MtrA K07670 mtrA; two-component system, OmpR family, response regulator MtrA D HMPREF0733_10902 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D HMPREF0733_10736 sitA; iron/manganese ABC transporter, periplasmic iron/manganese-binding protein K11601 mntC; manganese transport system substrate-binding protein D HMPREF0733_10735 mntA; manganese transport system ATP-binding protein MntA K11603 mntA; manganese transport system ATP-binding protein [EC:7.2.2.5] D HMPREF0733_10734 putative iron/manganese ABC transporter, permease protein K11602 mntB; manganese transport system permease protein D HMPREF0733_10266 serine-type D-Ala-D-Ala carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D HMPREF0733_10640 HpcH/HpaI aldolase/citrate lyase family protein K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34] D HMPREF0733_10324 nitrate reductase, alpha subunit K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-] D HMPREF0733_10323 narH; nitrate reductase, beta subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-] D HMPREF0733_10321 narI; respiratory nitrate reductase, gamma subunit K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-] D HMPREF0733_10322 narJ; nitrate reductase molybdenum cofactor assembly chaperone K00373 narJ; nitrate reductase molybdenum cofactor assembly chaperone NarJ/NarW D HMPREF0733_10198 histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3] D HMPREF0733_11093 histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3] D HMPREF0733_10199 response regulator receiver domain protein K07693 desR; two-component system, NarL family, response regulator DesR D HMPREF0733_11094 response regulator receiver domain protein K07693 desR; two-component system, NarL family, response regulator DesR D HMPREF0733_10045 type II/IV secretion system protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D HMPREF0733_10463 type II/IV secretion system protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D HMPREF0733_10044 bacterial type II secretion system domain protein F K12510 tadB; tight adherence protein B D HMPREF0733_10462 bacterial type II secretion system domain protein F K12510 tadB; tight adherence protein B D HMPREF0733_10043 bacterial type II secretion system domain protein F K12511 tadC; tight adherence protein C D HMPREF0733_10013 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D HMPREF0733_11691 glutamine synthetase, beta-grasp domain protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D HMPREF0733_11625 dctA; aerobic C4-dicarboxylate transport protein K11103 dctA; aerobic C4-dicarboxylate transport protein D HMPREF0733_10471 cyclic nucleotide-binding domain protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D HMPREF0733_12062 glsA; glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2] D HMPREF0733_11750 bacterial cytochrome ubiquinol oxidase K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D HMPREF0733_11751 cydB; cytochrome d ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D HMPREF0733_11323 putative low molecular weight protein-tyrosine-phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48] C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:rdn02024] D HMPREF0733_11556 luxS; S-ribosylhomocysteinase LuxS K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21] D HMPREF0733_11818 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D HMPREF0733_11656 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D HMPREF0733_10618 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D HMPREF0733_11612 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D HMPREF0733_11653 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D HMPREF0733_10471 cyclic nucleotide-binding domain protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D HMPREF0733_11816 putative GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D HMPREF0733_11814 ribD; riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D HMPREF0733_11200 ABC transporter, substrate-binding protein, family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D HMPREF0733_11203 Tat pathway signal sequence domain protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D HMPREF0733_12205 ABC transporter, substrate-binding protein, family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D HMPREF0733_10907 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase D HMPREF0733_10513 putative serine metalloprotease MprA K14645 K14645; serine protease [EC:3.4.21.-] D HMPREF0733_10349 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE D HMPREF0733_11877 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG D HMPREF0733_10282 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY D HMPREF0733_12018 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC D HMPREF0733_10062 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D HMPREF0733_12124 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D HMPREF0733_12122 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis C 02040 Flagellar assembly D HMPREF0733_10001 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D HMPREF0733_11367 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance D HMPREF0733_11665 penicillin-binding protein, transpeptidase domain protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:rdn01502] D HMPREF0733_12141 D-ala D-ala ligase N-terminal domain protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D HMPREF0733_10256 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D HMPREF0733_11667 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D HMPREF0733_11668 putative phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D HMPREF0733_11671 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D HMPREF0733_10266 serine-type D-Ala-D-Ala carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] C 01503 Cationic antimicrobial peptide (CAMP) resistance D HMPREF0733_10888 cypB; peptidyl-prolyl cis-trans isomerase B K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:rdn01000] C 01001 Protein kinases [BR:rdn01001] D HMPREF0733_11004 kinase domain protein K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D HMPREF0733_11657 kinase domain protein K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D HMPREF0733_10946 kinase domain protein K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D HMPREF0733_10947 kinase domain protein K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D HMPREF0733_11434 chain length determinant protein K25588 K25588; tyrosine-protein kinase [EC:2.7.10.3] D HMPREF0733_11264 putative signal-transduction histidine kinase senX3 K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3] D HMPREF0733_10066 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3] D HMPREF0733_10865 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D HMPREF0733_10553 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D HMPREF0733_10198 histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3] D HMPREF0733_11093 histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3] D HMPREF0733_10055 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:rdn01009] D HMPREF0733_11500 protein phosphatase 2C K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] D HMPREF0733_10950 protein phosphatase 2C K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] C 01002 Peptidases and inhibitors [BR:rdn01002] D HMPREF0733_11681 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] D HMPREF0733_11387 peptidase, A24 family K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D HMPREF0733_10147 putative pyroglutamyl-peptidase I K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3] D HMPREF0733_10234 guaA; GMP synthase (glutamine-hydrolyzing) domain protein K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D HMPREF0733_10548 NlpC/P60 family protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D HMPREF0733_10511 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D HMPREF0733_10263 glmS; glutamine-fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D HMPREF0733_10943 sortase family protein K07284 srtA; sortase A [EC:3.4.22.70] D HMPREF0733_11914 pepN; membrane alanyl aminopeptidase K01256 pepN; aminopeptidase N [EC:3.4.11.2] D HMPREF0733_12102 pepN; membrane alanyl aminopeptidase K01256 pepN; aminopeptidase N [EC:3.4.11.2] D HMPREF0733_11050 peptidase family M13 K07386 pepO; putative endopeptidase [EC:3.4.24.-] D HMPREF0733_10266 serine-type D-Ala-D-Ala carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D HMPREF0733_10004 cytosol aminopeptidase family, catalytic domain protein K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D HMPREF0733_10132 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D HMPREF0733_10280 map; methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D HMPREF0733_11686 map; methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D HMPREF0733_10122 aminopeptidase P domain protein K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D HMPREF0733_10718 hflB; ATP-dependent metallopeptidase HflB K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D HMPREF0733_10394 peptidase, M48 family K03799 htpX; heat shock protein HtpX [EC:3.4.24.-] D HMPREF0733_10076 trypsin K08372 pepD; putative serine protease PepD [EC:3.4.21.-] D HMPREF0733_10513 putative serine metalloprotease MprA K14645 K14645; serine protease [EC:3.4.21.-] D HMPREF0733_11507 peptidase, S9A/B/C family, catalytic domain protein K01354 ptrB; oligopeptidase B [EC:3.4.21.83] D HMPREF0733_10727 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D HMPREF0733_12096 clpP; endopeptidase Clp K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D HMPREF0733_12097 clpP; endopeptidase Clp K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D HMPREF0733_10087 PDZ domain family protein K07177 K07177; Lon-like protease D HMPREF0733_11590 lexA; repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88] D HMPREF0733_11800 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D HMPREF0733_11801 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D HMPREF0733_10168 peptidase family S51 K05995 pepE; dipeptidase E [EC:3.4.13.21] D HMPREF0733_10155 peptidase family S51 K05995 pepE; dipeptidase E [EC:3.4.13.21] C 01003 Glycosyltransferases [BR:rdn01003] D HMPREF0733_11942 glycosyltransferase, group 2 family protein K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83] D HMPREF0733_11402 dolichyl-phosphate-mannose-protein mannosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109] D HMPREF0733_11427 glycosyltransferase, group 1 family protein K16150 K16150; glycogen synthase [EC:2.4.1.11] D HMPREF0733_10826 glycosyltransferase, group 1 family protein K21011 pelF; polysaccharide biosynthesis protein PelF D HMPREF0733_11087 Tat pathway signal sequence domain protein K13671 K13671; alpha-1,2-mannosyltransferase [EC:2.4.1.-] D HMPREF0733_11145 hypothetical protein K13671 K13671; alpha-1,2-mannosyltransferase [EC:2.4.1.-] D HMPREF0733_11211 hypothetical protein K13671 K13671; alpha-1,2-mannosyltransferase [EC:2.4.1.-] D HMPREF0733_11797 hypothetical protein K14339 mptB; alpha-1,6-mannosyltransferase [EC:2.4.1.-] D HMPREF0733_10048 glycosyltransferase, group 2 family protein K16650 glft2; galactofuranosylgalactofuranosylrhamnosyl-N-acetylglucosaminyl-diphospho-decaprenol beta-1,5/1,6-galactofuranosyltransferase [EC:2.4.1.288] C 01005 Lipopolysaccharide biosynthesis proteins [BR:rdn01005] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:rdn01011] D HMPREF0733_12144 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D HMPREF0733_10383 UDP-N-acetylenolpyruvoylglucosamine reductase domain protein K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D HMPREF0733_11672 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D HMPREF0733_11669 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D HMPREF0733_11666 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D HMPREF0733_12141 D-ala D-ala ligase N-terminal domain protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D HMPREF0733_10256 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D HMPREF0733_11741 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D HMPREF0733_11668 putative phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D HMPREF0733_11671 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D HMPREF0733_11957 uppP; undecaprenyl-diphosphatase UppP K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D HMPREF0733_10915 mviN; integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase D HMPREF0733_11665 penicillin-binding protein, transpeptidase domain protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D HMPREF0733_10948 putative penicillin-binding protein A K05364 pbpA; penicillin-binding protein A D HMPREF0733_10727 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D HMPREF0733_10266 serine-type D-Ala-D-Ala carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D HMPREF0733_10548 NlpC/P60 family protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D HMPREF0733_10943 sortase family protein K07284 srtA; sortase A [EC:3.4.22.70] D HMPREF0733_12002 YceG family protein K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] C 01004 Lipid biosynthesis proteins [BR:rdn01004] D HMPREF0733_11808 [acyl-carrier-protein] S-malonyltransferase family protein K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D HMPREF0733_10606 fabHA; beta-ketoacyl-acyl-carrier-protein synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D HMPREF0733_11809 fabHA; beta-ketoacyl-acyl-carrier-protein synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D HMPREF0733_10608 putative beta-ketoacyl-acyl-carrier-protein synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D HMPREF0733_11811 fabF; beta-ketoacyl-acyl-carrier-protein synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D HMPREF0733_10610 oxidoreductase, short chain dehydrogenase/reductase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D HMPREF0733_11907 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D HMPREF0733_11908 oxidoreductase, short chain dehydrogenase/reductase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D HMPREF0733_12106 putative acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] D HMPREF0733_11149 putative acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D HMPREF0733_10618 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D HMPREF0733_11612 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D HMPREF0733_11653 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D HMPREF0733_11655 Acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D HMPREF0733_11864 Acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins [BR:rdn01008] D HMPREF0733_12164 putative (2,3-dihydroxybenzoyl)adenylate synthase K02363 entE; 2,3-dihydroxybenzoate---[aryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.71] D HMPREF0733_12162 AMP-binding enzyme K02364 entF; L-serine---[L-seryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.72] D HMPREF0733_10223 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] C 01006 Prenyltransferases [BR:rdn01006] D HMPREF0733_11659 polyprenyl synthetase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29] D HMPREF0733_11386 di-trans,poly-cis-decaprenylcistransferase-like protein K12503 uppS; short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68] D HMPREF0733_11919 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D HMPREF0733_11584 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D HMPREF0733_10424 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] D HMPREF0733_11887 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] C 01007 Amino acid related enzymes [BR:rdn01007] D HMPREF0733_10416 gluQ; glutamyl-queuosine tRNA(Asp) synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D HMPREF0733_12184 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D HMPREF0733_11615 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D HMPREF0733_11355 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D HMPREF0733_11269 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D HMPREF0733_11703 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D HMPREF0733_12196 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D HMPREF0733_12078 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D HMPREF0733_12092 Anticodon-binding domain protein K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D HMPREF0733_11977 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D HMPREF0733_10706 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D HMPREF0733_10955 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D HMPREF0733_12012 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D HMPREF0733_12013 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D HMPREF0733_11521 glyS; glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D HMPREF0733_10754 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D HMPREF0733_11544 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D HMPREF0733_12034 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D HMPREF0733_12004 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D HMPREF0733_11607 pheS; phenylalanine--tRNA ligase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D HMPREF0733_11608 pheT; phenylalanine--tRNA ligase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D HMPREF0733_10350 aspC; aspartate transaminase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D HMPREF0733_10204 aminotransferase, class I/II K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D HMPREF0733_10626 putative histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D HMPREF0733_11936 gabT; 4-aminobutyrate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D HMPREF0733_10102 hemL; glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D HMPREF0733_12186 ilvE; branched-chain-amino-acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:rdn00194] D HMPREF0733_11727 ATP synthase, delta/epsilon subunit, beta-sandwich domain protein K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D HMPREF0733_11726 atpD; ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D HMPREF0733_11725 atpG; ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D HMPREF0733_11724 atpA; ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D HMPREF0733_11723 atpH; ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D HMPREF0733_11722 atpF; ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b D HMPREF0733_11721 atpE; ATP synthase subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c D HMPREF0733_11720 atpB; ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:rdn03000] D HMPREF0733_10456 transcriptional regulator, effector binding domain protein K13653 K13653; AraC family transcriptional regulator D HMPREF0733_10963 transcriptional regulator, AraC family K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] D HMPREF0733_10939 argP; transcriptional regulator, ArgP family K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor D HMPREF0733_10583 transcriptional regulator, DeoR family K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor D HMPREF0733_10336 putative HTH-type transcriptional regulator DegA K03484 scrR; LacI family transcriptional regulator, sucrose operon repressor D HMPREF0733_11352 UbiC transcription regulator-associated domain protein K03710 K03710; GntR family transcriptional regulator D HMPREF0733_10502 FCD domain protein K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D HMPREF0733_10517 transcriptional regulator, TetR family K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D HMPREF0733_11349 transcriptional regulator, TetR family K21962 acnR; TetR/AcrR family transcriptional regulator, transcriptional repressor of aconitase D HMPREF0733_11221 transcriptional regulator, TetR family K22105 fabR; TetR/AcrR family transcriptional regulator, fatty acid biosynthesis regulator D HMPREF0733_11330 putative heat shock protein HspR K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR D HMPREF0733_10021 transcriptional regulator, Fur family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D HMPREF0733_10396 transcriptional regulator, Fur family K22297 furA; Fur family transcriptional regulator, stress-responsive regulator D HMPREF0733_10471 cyclic nucleotide-binding domain protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D HMPREF0733_11250 nsrR; HTH-type transcriptional repressor NsrR K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor D HMPREF0733_12039 transcriptional regulator, ArsR family K22298 smtB; ArsR family transcriptional regulator, zinc-responsive transcriptional repressor D HMPREF0733_11577 DNA-binding helix-turn-helix protein K27043 clgR; XRE family transcriptional regulator, stress-response regulator D HMPREF0733_10549 ideR; iron-dependent repressor IdeR K26252 dtxR; DtxR family transcriptional regulator, iron-dependent repressor D HMPREF0733_10733 iron dependent repressor DNA binding domain protein K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator D HMPREF0733_11497 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D HMPREF0733_11647 aldehyde dehydrogenase (NAD) family protein K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D HMPREF0733_10871 CAT RNA binding domain protein K03488 licT; beta-glucoside operon transcriptional antiterminator D HMPREF0733_10054 transcription factor WhiB K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D HMPREF0733_11399 transcription factor WhiB K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D HMPREF0733_10762 putative copper-sensing transcriptional repressor CsoR K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor D HMPREF0733_10911 ParB-like protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D HMPREF0733_11610 argR; arginine repressor K03402 argR; transcriptional regulator of arginine metabolism D HMPREF0733_11966 hrcA; heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor D HMPREF0733_11645 putative sugar-binding domain protein K05346 deoR; deoxyribonucleoside regulator D HMPREF0733_11994 pyrR; pyrimidine operon regulatory protein/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D HMPREF0733_11684 nrdR; transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR D HMPREF0733_11662 mraZ; protein MraZ K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:rdn03021] D HMPREF0733_10274 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D HMPREF0733_10313 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D HMPREF0733_10312 rpoC; DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D HMPREF0733_11985 rpoZ; DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D HMPREF0733_10001 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D HMPREF0733_10782 Sigma-70 region 2 K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D HMPREF0733_10029 RNA polymerase sigma-70 factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D HMPREF0733_11546 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA D HMPREF0733_11996 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB D HMPREF0733_10348 nusG; transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG D HMPREF0733_11382 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D HMPREF0733_11710 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:rdn03019] D HMPREF0733_12071 S1 RNA binding domain protein K08300 rne; ribonuclease E [EC:3.1.26.12] D HMPREF0733_12131 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D HMPREF0733_11573 hypothetical protein K12574 rnj; ribonuclease J [EC:3.1.-.-] D HMPREF0733_11798 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D HMPREF0733_10388 deaD; cold-shock DEAD-box protein A K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D HMPREF0733_10665 ATP-dependent DNA helicase, RecQ family K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D HMPREF0733_11367 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D HMPREF0733_11561 gpsI; guanosine pentaphosphate synthetase I/polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D HMPREF0733_11710 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D HMPREF0733_11327 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D HMPREF0733_10247 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D HMPREF0733_10572 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D HMPREF0733_10356 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D HMPREF0733_10269 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D HMPREF0733_10917 tRNA adenylyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D HMPREF0733_11866 hypothetical protein K06958 rapZ; RNase adapter protein RapZ D HMPREF0733_11944 DEAD/DEAH box helicase K03727 helY; ATP-dependent RNA helicase HelY [EC:5.6.2.6] D HMPREF0733_11699 hrpA; ATP-dependent helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6] C 03041 Spliceosome C 03011 Ribosome [BR:rdn03011] D HMPREF0733_11833 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D HMPREF0733_11534 rpsB; ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D HMPREF0733_10297 rpsC; ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D HMPREF0733_12008 rpsD; ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D HMPREF0733_10285 rpsE; ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D HMPREF0733_10921 rpsF; ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D HMPREF0733_10310 rpsG; ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D HMPREF0733_10288 rpsH; ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D HMPREF0733_10270 rpsI; ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D HMPREF0733_10304 rpsJ; ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D HMPREF0733_10275 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D HMPREF0733_10311 rpsL; ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D HMPREF0733_10276 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D HMPREF0733_11278 rpsN; ribosomal protein S14p/S29e K02954 RP-S14; small subunit ribosomal protein S14 D HMPREF0733_11560 rpsO; ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D HMPREF0733_12119 rpsP; ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D HMPREF0733_10294 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D HMPREF0733_10923 rpsR; ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D HMPREF0733_10299 rpsS; ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D HMPREF0733_11971 rpsT; ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D HMPREF0733_10345 rplA; ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D HMPREF0733_10300 rplB; ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D HMPREF0733_10303 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D HMPREF0733_10302 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D HMPREF0733_10289 rplE; ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D HMPREF0733_10287 rplF; ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D HMPREF0733_10924 rplI; ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D HMPREF0733_10342 rplJ; ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D HMPREF0733_10346 rplK; ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D HMPREF0733_10341 rplL; ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D HMPREF0733_10271 rplM; ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D HMPREF0733_10291 rplN; ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D HMPREF0733_10283 rplO; ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D HMPREF0733_10296 rplP; ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D HMPREF0733_10273 rplQ; ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D HMPREF0733_10286 rplR; ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D HMPREF0733_11799 rplS; ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D HMPREF0733_11599 rplT; ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D HMPREF0733_12070 rplU; ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D HMPREF0733_10298 rplV; ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D HMPREF0733_10301 rplW; ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D HMPREF0733_10290 rplX; ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D HMPREF0733_12069 rpmA; ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D HMPREF0733_11276 rpmB; ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D HMPREF0733_10295 rpmC; ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D HMPREF0733_10284 rpmD; ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D HMPREF0733_11911 rpmE; ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D HMPREF0733_12132 rpmF; ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D HMPREF0733_11277 rpmG; ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D HMPREF0733_10903 rpmH; ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D HMPREF0733_11598 rpmI; ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D HMPREF0733_10277 rpmJ; ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D HMPREF0733_11441 ribosomal L25p family protein K02897 RP-L25; large subunit ribosomal protein L25 D HMPREF0733_r10001 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D HMPREF0733_r10002 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D HMPREF0733_r10007 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D HMPREF0733_r10010 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D HMPREF0733_r10003 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D HMPREF0733_r10008 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D HMPREF0733_r10005 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D HMPREF0733_r10004 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D HMPREF0733_r10006 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D HMPREF0733_r10009 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:rdn03009] D HMPREF0733_12131 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D HMPREF0733_11798 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D HMPREF0733_11960 era; ribosome biogenesis GTPase Era K03595 era; GTPase D HMPREF0733_12068 cgtA; Obg family GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-] D HMPREF0733_11546 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA D HMPREF0733_11996 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB D HMPREF0733_10348 nusG; transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG D HMPREF0733_11407 ksgA; dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D HMPREF0733_12175 putative ribosomal RNA small subunit methyltransferase B K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D HMPREF0733_11586 methyltransferase small domain protein K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172] D HMPREF0733_12135 RNA methyltransferase, RsmD family K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D HMPREF0733_11964 RNA methyltransferase, RsmE family K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D HMPREF0733_10909 gidB; 16S rRNA methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D HMPREF0733_11663 mraW; S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D HMPREF0733_11403 S-adenosylmethionine-dependent methyltransferase, YraL family K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D HMPREF0733_11619 putative ribosomal RNA large subunit methyltransferase J K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D HMPREF0733_11270 RNA methyltransferase, TrmH family, group 3 K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D HMPREF0733_10279 rlmN; 23S rRNA m2A2503 methyltransferase K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D HMPREF0733_10570 rumB; 23S rRNA (uracil-5-)-methyltransferase RumB K03212 rumB; 23S rRNA (uracil747-C5)-methyltransferase [EC:2.1.1.189] D HMPREF0733_11236 RNA pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D HMPREF0733_11629 pseudouridylate synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D HMPREF0733_11682 pseudouridine synthase, RluA family K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D HMPREF0733_10253 rimI; ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D HMPREF0733_12117 rimM; 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM D HMPREF0733_12071 S1 RNA binding domain protein K08300 rne; ribonuclease E [EC:3.1.26.12] D HMPREF0733_12003 RNAse H domain protein, YqgF family K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D HMPREF0733_10388 deaD; cold-shock DEAD-box protein A K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D HMPREF0733_10032 putative ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D HMPREF0733_11632 der; ribosome biogenesis GTPase Der K03977 engA; GTPase D HMPREF0733_11587 hflX; GTP-binding protein HflX K03665 hflX; GTPase D HMPREF0733_11713 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D HMPREF0733_12015 relA; GTP diphosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D HMPREF0733_11549 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A D HMPREF0733_11545 hypothetical protein K09748 rimP; ribosome maturation factor RimP D HMPREF0733_11520 S4 domain protein K14761 rlbA; ribosome-associated protein D HMPREF0733_12064 iojap-like protein K09710 ybeB; ribosome-associated protein D HMPREF0733_11962 ybeY; translation metalloprotein YbeY K07042 ybeY; probable rRNA maturation factor D HMPREF0733_10195 ychF; GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase D HMPREF0733_12133 putative ACR, COG1399 K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:rdn03016] D HMPREF0733_10416 gluQ; glutamyl-queuosine tRNA(Asp) synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D HMPREF0733_12184 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D HMPREF0733_11544 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D HMPREF0733_12078 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D HMPREF0733_11977 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D HMPREF0733_12196 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D HMPREF0733_11703 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D HMPREF0733_10706 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D HMPREF0733_10955 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D HMPREF0733_12012 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D HMPREF0733_12004 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D HMPREF0733_11521 glyS; glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D HMPREF0733_12034 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D HMPREF0733_10754 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D HMPREF0733_11269 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D HMPREF0733_12092 Anticodon-binding domain protein K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D HMPREF0733_12013 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D HMPREF0733_11607 pheS; phenylalanine--tRNA ligase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D HMPREF0733_11608 pheT; phenylalanine--tRNA ligase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D HMPREF0733_11615 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D HMPREF0733_11355 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D HMPREF0733_12010 dtd; D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D HMPREF0733_11955 tRNA methyltransferase complex GCD14 subunit K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220] D HMPREF0733_11331 trmB; tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D HMPREF0733_10272 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D HMPREF0733_11550 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D HMPREF0733_10071 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D HMPREF0733_11713 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D HMPREF0733_11584 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D HMPREF0733_10905 putative ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D HMPREF0733nc10007 Bacterial RNase P class A K01978 rnpB; M1 RNA D HMPREF0733_11743 rph; tRNA nucleotidyltransferase K00989 rph; ribonuclease PH [EC:2.7.7.56] D HMPREF0733_11777 3'-5' exonuclease K03684 rnd; ribonuclease D [EC:3.1.13.5] D HMPREF0733_12113 ATP-binding cassette protein, ChvD family K06020 ettA; energy-dependent translational throttle protein EttA D HMPREF0733_11780 YbaK/EbsC protein K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-] D HMPREF0733_10664 cytidine and deoxycytidylate deaminase zinc-binding region K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D HMPREF0733_11583 miaB; tRNA-i(6)A37 thiotransferase enzyme MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D HMPREF0733_12116 trmD; tRNA (guanine-N(1)-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D HMPREF0733_10072 putative RNA methyltransferase, TrmH family, group 2 K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D HMPREF0733_11600 RNA methyltransferase, TrmH family K03437 spoU; RNA methyltransferase, TrmH family D HMPREF0733_11236 RNA pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D HMPREF0733_10070 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D HMPREF0733_10352 glycine cleavage T-protein C-terminal barrel domain protein K06980 ygfZ; tRNA-modifying protein YgfZ D HMPREF0733_11234 tgt; tRNA-guanine transglycosylase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D HMPREF0733_10722 tilS; tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D HMPREF0733_10254 yeaZ; universal bacterial protein YeaZ K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D HMPREF0733_10252 putative glycoprotease GCP K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D HMPREF0733_10255 hydrolase, P-loop family K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D HMPREF0733_11561 gpsI; guanosine pentaphosphate synthetase I/polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:rdn03012] D HMPREF0733_11548 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D HMPREF0733_11597 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D HMPREF0733_11535 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts D HMPREF0733_10308 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu D HMPREF0733_10309 fusA; translation elongation factor G K02355 fusA; elongation factor G D HMPREF0733_11711 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D HMPREF0733_11537 frr; ribosome recycling factor K02838 frr; ribosome recycling factor D HMPREF0733_11712 prmC; protein-(glutamine-N5) methyltransferase, release factor-specific K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D HMPREF0733_11443 pth; aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D HMPREF0733_10278 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D HMPREF0733_11997 efp; translation elongation factor P K02356 efp; elongation factor P D HMPREF0733_10038 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2 C 03110 Chaperones and folding catalysts [BR:rdn03110] D HMPREF0733_10529 clpB; ATP-dependent chaperone protein ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D HMPREF0733_10703 clpC; negative regulator of genetic competence ClpC/MecB K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC D HMPREF0733_12095 clpX; ATP-dependent Clp protease, ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D HMPREF0733_11327 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D HMPREF0733_10247 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D HMPREF0733_10572 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D HMPREF0733_11329 DnaJ domain protein K03686 dnaJ; molecular chaperone DnaJ D HMPREF0733_11965 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D HMPREF0733_11328 grpE; co-chaperone GrpE K03687 GRPE; molecular chaperone GrpE D HMPREF0733_10786 S4 domain protein K04762 hslR; ribosome-associated heat shock protein Hsp15 D HMPREF0733_10248 groS; chaperonin GroS K04078 groES; chaperonin GroES D HMPREF0733_10718 hflB; ATP-dependent metallopeptidase HflB K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D HMPREF0733_11720 atpB; ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a D HMPREF0733_11290 hypothetical protein K09796 pccA; periplasmic copper chaperone A D HMPREF0733_10513 putative serine metalloprotease MprA K14645 K14645; serine protease [EC:3.4.21.-] D HMPREF0733_10888 cypB; peptidyl-prolyl cis-trans isomerase B K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D HMPREF0733_10912 trxA; thioredoxin K03671 TXN; thioredoxin D HMPREF0733_10391 trxA; thioredoxin K03671 TXN; thioredoxin D HMPREF0733_11732 hypothetical protein K05838 ybbN; putative thioredoxin C 04131 Membrane trafficking [BR:rdn04131] D HMPREF0733_12074 ndkA; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D HMPREF0733_10822 gap; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D HMPREF0733_11870 gap; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D HMPREF0733_11263 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D HMPREF0733_11827 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D HMPREF0733_11313 transporter, major facilitator family protein K06902 UMF1; MFS transporter, UMF1 family C 04121 Ubiquitin system [BR:rdn04121] D HMPREF0733_11952 ubiquitin-like protein Pup K13570 pup; prokaryotic ubiquitin-like protein Pup C 03051 Proteasome [BR:rdn03051] D HMPREF0733_11954 arc; proteasome ATPase K13527 mpa; proteasome-associated ATPase D HMPREF0733_11951 pafA; proteasome accessory factor PafA K13571 pafA; proteasome accessory factor A [EC:6.3.1.19] D HMPREF0733_11948 hypothetical protein K24033 pafBC; proteasome accessory factor BC D HMPREF0733_11953 proteasome accessory factor PafA2 K20814 dop; Pup amidohydrolase [EC:3.5.1.119] C 03032 DNA replication proteins [BR:rdn03032] D HMPREF0733_10555 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D HMPREF0733_11279 hup; DNA-binding protein HB1 K03530 hupB; DNA-binding protein HU-beta D HMPREF0733_10902 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D HMPREF0733_10933 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D HMPREF0733_11525 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D HMPREF0733_10922 single-strand binding family protein K03111 ssb; single-strand DNA-binding protein D HMPREF0733_11795 single-strand binding family protein K03111 ssb; single-strand DNA-binding protein D HMPREF0733_11683 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D HMPREF0733_10901 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D HMPREF0733_11973 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D HMPREF0733_11259 putative DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D HMPREF0733_10094 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D HMPREF0733_11855 exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D HMPREF0733_11219 dnaX; DNA polymerase III, subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D HMPREF0733_11802 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D HMPREF0733_11501 ligA; DNA ligase (NAD+) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D HMPREF0733_10897 gyrA; DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D HMPREF0733_11759 DNA gyrase/topoisomerase IV, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D HMPREF0733_10898 gyrB; DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D HMPREF0733_11747 DNA gyrase, B subunit, C-terminal domain protein K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D HMPREF0733_10450 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:rdn03036] D HMPREF0733_12131 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D HMPREF0733_10704 Lsr2 family protein K26249 lsr2; nucleoid-associated protein Lsr2 D HMPREF0733_11279 hup; DNA-binding protein HB1 K03530 hupB; DNA-binding protein HU-beta D HMPREF0733_10902 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D HMPREF0733_10533 putative DNA protection during starvation protein K04047 dps; starvation-inducible DNA-binding protein D HMPREF0733_10939 argP; transcriptional regulator, ArgP family K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor D HMPREF0733_12126 RecF/RecN/SMC N-terminal domain protein K03529 smc; chromosome segregation protein D HMPREF0733_11627 ScpA/B protein K05896 scpA; segregation and condensation protein A D HMPREF0733_11628 scpB; segregation and condensation protein B K06024 scpB; segregation and condensation protein B D HMPREF0733_11665 penicillin-binding protein, transpeptidase domain protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D HMPREF0733_10051 FtsK/SpoIIIE family protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D HMPREF0733_11007 FtsK/SpoIIIE family protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D HMPREF0733_11574 FtsK/SpoIIIE family protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D HMPREF0733_11673 POTRA domain protein, FtsQ-type K03589 ftsQ; cell division protein FtsQ D HMPREF0733_11670 putative cell division protein FtsW K03588 ftsW; cell division protein FtsW D HMPREF0733_11674 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D HMPREF0733_11785 ATPase, AFG1 family K06916 zapE; cell division protein ZapE D HMPREF0733_11677 hypothetical protein K09772 sepF; cell division inhibitor SepF D HMPREF0733_10910 soj; sporulation initiation inhibitor protein Soj K03496 parA; chromosome partitioning protein D HMPREF0733_11626 soj; sporulation initiation inhibitor protein Soj K03496 parA; chromosome partitioning protein D HMPREF0733_11651 CobQ/CobB/MinD/ParA nucleotide binding domain protein K03496 parA; chromosome partitioning protein D HMPREF0733_10911 ParB-like protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D HMPREF0733_10909 gidB; 16S rRNA methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D HMPREF0733_11807 phage integrase SAM-like domain protein K03733 xerC; integrase/recombinase XerC D HMPREF0733_11624 phage integrase SAM-like domain protein K04763 xerD; integrase/recombinase XerD D HMPREF0733_10126 hypothetical protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D HMPREF0733_11868 hypothetical protein K09762 whiA; cell division protein WhiA C 03400 DNA repair and recombination proteins [BR:rdn03400] D HMPREF0733_11637 putative methylated-DNA--[protein]-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D HMPREF0733_10575 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D HMPREF0733_10699 putative A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D HMPREF0733_10467 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D HMPREF0733_11602 mutator mutT protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D HMPREF0733_10150 hydrolase, NUDIX family K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D HMPREF0733_10206 hydrolase, NUDIX family K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D HMPREF0733_11766 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D HMPREF0733_10963 transcriptional regulator, AraC family K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] D HMPREF0733_11636 tag; DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D HMPREF0733_12130 mutM; DNA-formamidopyrimidine glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D HMPREF0733_12099 Formamidopyrimidine-DNA glycosylase H2TH domain protein K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18] D HMPREF0733_10740 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D HMPREF0733_11354 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D HMPREF0733_11501 ligA; DNA ligase (NAD+) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D HMPREF0733_12045 uvrA; excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A D HMPREF0733_11837 uvrB; excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B D HMPREF0733_11865 uvrC; excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C D HMPREF0733_10090 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D HMPREF0733_10092 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D HMPREF0733_10538 pcrA; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D HMPREF0733_10313 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D HMPREF0733_10312 rpoC; DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D HMPREF0733_10274 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D HMPREF0733_11985 rpoZ; DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D HMPREF0733_11480 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D HMPREF0733_10202 xseA; exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D HMPREF0733_10203 xseB; exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D HMPREF0733_11683 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D HMPREF0733_10901 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D HMPREF0733_11973 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D HMPREF0733_11259 putative DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D HMPREF0733_10094 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D HMPREF0733_11855 exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D HMPREF0733_11219 dnaX; DNA polymerase III, subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D HMPREF0733_10922 single-strand binding family protein K03111 ssb; single-strand DNA-binding protein D HMPREF0733_11795 single-strand binding family protein K03111 ssb; single-strand DNA-binding protein D HMPREF0733_11579 recA; RecA protein K03553 recA; recombination protein RecA D HMPREF0733_12020 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D HMPREF0733_12019 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D HMPREF0733_12021 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D HMPREF0733_11982 putative primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D HMPREF0733_12213 exonuclease SbcCD, C subunit K03546 sbcC; DNA repair protein SbcC/Rad50 D HMPREF0733_12214 sbcD; exonuclease SbcCD, D subunit K03547 sbcD; DNA repair protein SbcD/Mre11 D HMPREF0733_10696 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms D HMPREF0733_10900 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF D HMPREF0733_10962 divergent AAA domain protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D HMPREF0733_10631 divergent AAA domain protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D HMPREF0733_12136 putative ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D HMPREF0733_11918 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D HMPREF0733_11218 recR; recombination protein RecR K06187 recR; recombination protein RecR D HMPREF0733_11621 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D HMPREF0733_10897 gyrA; DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D HMPREF0733_11759 DNA gyrase/topoisomerase IV, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D HMPREF0733_10898 gyrB; DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D HMPREF0733_11747 DNA gyrase, B subunit, C-terminal domain protein K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D HMPREF0733_10450 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D HMPREF0733_11279 hup; DNA-binding protein HB1 K03530 hupB; DNA-binding protein HU-beta D HMPREF0733_10665 ATP-dependent DNA helicase, RecQ family K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D HMPREF0733_11660 ImpB/MucB/SamB family protein K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D HMPREF0733_11590 lexA; repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88] D HMPREF0733_11580 recX; regulatory protein RecX K03565 recX; regulatory protein D HMPREF0733_11588 dinG; ATP-dependent helicase DinG K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] D HMPREF0733_11239 DEAD/DEAH box helicase K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] D HMPREF0733_10357 hydrolase, NUDIX family K23258 mutT1; 8-oxo-(d)GTP phosphatase [EC:3.6.1.69] D HMPREF0733_11623 hydrolase, NUDIX family K01554 K01554; 8-oxo-dGDP phosphatase [EC:3.6.1.58] D HMPREF0733_12052 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D HMPREF0733_12051 ribonucleoside-diphosphate reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] C 03029 Mitochondrial biogenesis [BR:rdn03029] D HMPREF0733_11548 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D HMPREF0733_11597 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D HMPREF0733_11535 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts D HMPREF0733_10308 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu D HMPREF0733_10309 fusA; translation elongation factor G K02355 fusA; elongation factor G D HMPREF0733_11960 era; ribosome biogenesis GTPase Era K03595 era; GTPase D HMPREF0733_11615 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D HMPREF0733_11977 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D HMPREF0733_12012 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D HMPREF0733_11521 glyS; glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D HMPREF0733_11703 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D HMPREF0733_11504 gatA; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D HMPREF0733_11505 gatB; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D HMPREF0733_11503 gatC; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D HMPREF0733_10922 single-strand binding family protein K03111 ssb; single-strand DNA-binding protein D HMPREF0733_11795 single-strand binding family protein K03111 ssb; single-strand DNA-binding protein D HMPREF0733_11327 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D HMPREF0733_11328 grpE; co-chaperone GrpE K03687 GRPE; molecular chaperone GrpE D HMPREF0733_10247 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D HMPREF0733_10572 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D HMPREF0733_10248 groS; chaperonin GroS K04078 groES; chaperonin GroES D HMPREF0733_11329 DnaJ domain protein K03686 dnaJ; molecular chaperone DnaJ D HMPREF0733_11965 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D HMPREF0733_10071 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D HMPREF0733_10126 hypothetical protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D HMPREF0733_11887 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D HMPREF0733_11888 cytochrome oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9] D HMPREF0733_10907 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:rdn02000] D HMPREF0733_11418 ABC transporter, ATP-binding protein K24846 pglK; ATP-binding cassette, subfamily B, bacterial PglK [EC:7.5.2.-] D HMPREF0733_10965 ABC transporter, ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D HMPREF0733_10482 ABC transporter, ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D HMPREF0733_10483 ABC transporter, ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D HMPREF0733_10966 ABC transporter, ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D HMPREF0733_11506 ABC transporter, ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D HMPREF0733_11752 cydC; thiol reductant ABC exporter, CydC subunit K16014 cydCD; ATP-binding cassette, subfamily C, bacterial CydCD D HMPREF0733_11412 ABC transporter, ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein D HMPREF0733_10331 modA; molybdate ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein D HMPREF0733_10330 ABC transporter, permease protein K02018 modB; molybdate transport system permease protein D HMPREF0733_11156 ABC transporter, substrate-binding protein, aliphatic sulfonates family K15553 ssuA; sulfonate transport system substrate-binding protein D HMPREF0733_11155 putative aliphatic sulfonates transport permease protein SsuC K15554 ssuC; sulfonate transport system permease protein D HMPREF0733_11157 ABC transporter, ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D HMPREF0733_10205 ABC transporter, substrate-binding protein, QAT family K05845 opuC; osmoprotectant transport system substrate-binding protein D HMPREF0733_11185 Tat pathway signal sequence domain protein K05845 opuC; osmoprotectant transport system substrate-binding protein D HMPREF0733_11183 ABC transporter, permease protein K05846 opuBD; osmoprotectant transport system permease protein D HMPREF0733_11184 ABC transporter, permease protein K05846 opuBD; osmoprotectant transport system permease protein D HMPREF0733_11182 ABC transporter, ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D HMPREF0733_10136 putative ABC transporter glutamine-binding protein GlnH K10005 gluB; glutamate transport system substrate-binding protein D HMPREF0733_10137 ABC transporter, permease protein K10006 gluC; glutamate transport system permease protein D HMPREF0733_10138 ABC transporter, permease protein K10007 gluD; glutamate transport system permease protein D HMPREF0733_10135 gluA; glutamate ABC transporter, ATP-binding protein GluA K10008 gluA; glutamate transport system ATP-binding protein [EC:7.4.2.1] D HMPREF0733_10598 putative D-methionine-binding lipoprotein MetQ K02073 metQ; D-methionine transport system substrate-binding protein D HMPREF0733_10595 ABC transporter, permease protein K02072 metI; D-methionine transport system permease protein D HMPREF0733_10596 ABC transporter, ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein D HMPREF0733_10408 ABC transporter, substrate-binding protein, family 3 K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D HMPREF0733_10409 putative glutamine ABC transporter permease protein GlnM K02029 ABC.PA.P; polar amino acid transport system permease protein D HMPREF0733_10410 glnQ; glutamine ABC transporter, ATP-binding protein GlnQ K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D HMPREF0733_11199 Tat pathway signal sequence domain protein K13889 gsiB; glutathione transport system substrate-binding protein D HMPREF0733_11198 ABC transporter, substrate-binding protein, family 5 K13889 gsiB; glutathione transport system substrate-binding protein D HMPREF0733_11195 ABC transporter, permease protein K13890 gsiC; glutathione transport system permease protein D HMPREF0733_11196 ABC transporter, permease protein K13891 gsiD; glutathione transport system permease protein D HMPREF0733_11197 putative phosphonate C-P lyase system protein PhnK K13892 gsiA; glutathione transport system ATP-binding protein D HMPREF0733_11200 ABC transporter, substrate-binding protein, family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D HMPREF0733_11203 Tat pathway signal sequence domain protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D HMPREF0733_12205 ABC transporter, substrate-binding protein, family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D HMPREF0733_11208 periplasmic binding protein K25132 hmuT; heme transport system substrate-binding protein D HMPREF0733_11207 iron chelate uptake ABC transporter, FeCT family, permease protein K25133 hmuU; heme transport system permease protein D HMPREF0733_11206 putative hemin import ATP-binding protein HmuV K10834 hmuV; heme transport system ATP-binding protein [EC:7.6.2.5] D HMPREF0733_11130 periplasmic binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein D HMPREF0733_12173 Tat pathway signal sequence domain protein K25286 fagD; iron-siderophore transport system substrate-binding protein D HMPREF0733_11128 fepD; ferric enterobactin transport system permease protein FepD K23186 fepD; iron-siderophore transport system permease protein D HMPREF0733_12168 putative ferric enterobactin transport system permease protein FepD K23186 fepD; iron-siderophore transport system permease protein D HMPREF0733_11127 putative ferric enterobactin transport system permease protein FepG K23187 fepG; iron-siderophore transport system permease protein D HMPREF0733_12167 putative ferric enterobactin transport system permease protein FepG K23187 fepG; iron-siderophore transport system permease protein D HMPREF0733_11274 fhuC; ferrichrome ABC transporter, ATP-binding protein FhuC K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-] D HMPREF0733_12166 fhuC; ferrichrome ABC transporter, ATP-binding protein FhuC K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-] D HMPREF0733_11909 ABC transporter, ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D HMPREF0733_10736 sitA; iron/manganese ABC transporter, periplasmic iron/manganese-binding protein K11601 mntC; manganese transport system substrate-binding protein D HMPREF0733_10734 putative iron/manganese ABC transporter, permease protein K11602 mntB; manganese transport system permease protein D HMPREF0733_10735 mntA; manganese transport system ATP-binding protein MntA K11603 mntA; manganese transport system ATP-binding protein [EC:7.2.2.5] D HMPREF0733_10997 anchored repeat-type ABC transporter, permease subunit K09819 ABC.MN.P; manganese/iron transport system permease protein D HMPREF0733_11901 BioY family protein K03523 bioY; biotin transport system substrate-specific component D HMPREF0733_11899 cobalt transport protein K16783 bioN; biotin transport system permease protein D HMPREF0733_11900 ABC transporter, ATP-binding protein K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-] D HMPREF0733_11318 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein D HMPREF0733_11317 ABC transporter, ATP-binding protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D HMPREF0733_11316 hypothetical protein K16925 ykoE; energy-coupling factor transport system permease protein D HMPREF0733_10024 ABC transporter, substrate-binding protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein D HMPREF0733_10022 ABC 3 transport family protein K02075 ABC.ZM.P; zinc/manganese transport system permease protein D HMPREF0733_10023 ferrichrome ABC transporter, ATP-binding protein FhuC family protein K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein D HMPREF0733_11734 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D HMPREF0733_10197 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein D HMPREF0733_10750 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein D HMPREF0733_11091 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein D HMPREF0733_11513 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D HMPREF0733_11514 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D HMPREF0733_11889 putative ABC transporter K01992 ABC-2.P; ABC-2 type transport system permease protein D HMPREF0733_10047 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein D HMPREF0733_10196 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D HMPREF0733_10751 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D HMPREF0733_10926 putative bacitracin ABC transporter, ATP-binding protein BcrA K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D HMPREF0733_11092 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D HMPREF0733_11890 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D HMPREF0733_11515 sodium extrusion ABC transporter, ATP-binding protein NatA family protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D HMPREF0733_11733 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D HMPREF0733_10046 putative O-antigen export system ATP-binding protein RfbB K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D HMPREF0733_10398 efflux ABC transporter, permease protein K02004 ABC.CD.P; putative ABC transport system permease protein D HMPREF0733_11084 efflux ABC transporter, permease protein K02004 ABC.CD.P; putative ABC transport system permease protein D HMPREF0733_12191 efflux ABC transporter, permease protein K02004 ABC.CD.P; putative ABC transport system permease protein D HMPREF0733_12193 efflux ABC transporter, permease protein K02004 ABC.CD.P; putative ABC transport system permease protein D HMPREF0733_12195 efflux ABC transporter, permease protein K02004 ABC.CD.P; putative ABC transport system permease protein D HMPREF0733_10588 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D HMPREF0733_10399 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D HMPREF0733_11083 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D HMPREF0733_12192 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D HMPREF0733_12194 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D HMPREF0733_11894 sufC; FeS assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein D HMPREF0733_10741 sodium bile acid symporter family protein K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7 D HMPREF0733_11111 MATE efflux family protein K18908 mepA; MATE family, multidrug efflux pump D HMPREF0733_11113 MATE efflux family protein K18908 mepA; MATE family, multidrug efflux pump D HMPREF0733_10785 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump D HMPREF0733_11055 MFS transporter, SP family K06609 iolT; MFS transporter, SP family, major inositol transporter D HMPREF0733_10320 transporter, major facilitator family protein K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D HMPREF0733_11139 drug resistance transporter, Bcr/CflA subfamily K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D HMPREF0733_11321 drug resistance transporter, Bcr/CflA subfamily K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D HMPREF0733_10845 transporter, major facilitator family protein K19576 norA; MFS transporter, DHA1 family, quinolone resistance protein D HMPREF0733_11301 transporter, major facilitator family protein K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein D HMPREF0733_10975 transporter, major facilitator family protein K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein D HMPREF0733_11313 transporter, major facilitator family protein K06902 UMF1; MFS transporter, UMF1 family D HMPREF0733_10378 transporter, major facilitator family protein K08369 ydjE; MFS transporter, putative metabolite:H+ symporter D HMPREF0733_10580 ptsP; phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D HMPREF0733_10579 phosphocarrier, HPr family K02784 ptsH; phosphocarrier protein HPr D HMPREF0733_10792 putative glucose-specific phosphotransferase enzyme IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D HMPREF0733_10339 PTS system sucrose-specific IIBC component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211] D HMPREF0733_11204 phosphotransferase system, EIIB K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-] D HMPREF0733_10217 glvC; PTS system maltose-specific EIICB component K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-] D HMPREF0733_10581 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D HMPREF0733_10872 manX; PTS system mannose-specific EIIAB component K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191] D HMPREF0733_10873 PTS system, mannose/fructose/sorbose family, IIC component K02795 manY; mannose PTS system EIIC component D HMPREF0733_10874 manZ; mannose permease IID component K02796 manZ; mannose PTS system EIID component D HMPREF0733_10847 MIP family channel protein K02440 glpF; glycerol uptake facilitator D HMPREF0733_11643 MIP family channel protein K02440 glpF; glycerol uptake facilitator D HMPREF0733_12028 Ion channel K10716 kch; voltage-gated potassium channel D HMPREF0733_10267 mscL; large conductance mechanosensitive channel protein K03282 mscL; large conductance mechanosensitive channel D HMPREF0733_11124 putative magnesium and cobalt transport protein CorA K03284 corA; magnesium transporter D HMPREF0733_10860 CrcB-like protein K06199 crcB; fluoride exporter D HMPREF0733_10861 CrcB-like protein K06199 crcB; fluoride exporter D HMPREF0733_10025 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D HMPREF0733_10026 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D HMPREF0733_10152 lysP; lysine-specific permease K11733 lysP; lysine-specific permease D HMPREF0733_11333 cycA; D-serine/D-alanine/glycine transporter K11737 cycA; D-serine/D-alanine/glycine transporter D HMPREF0733_11334 cycA; D-serine/D-alanine/glycine transporter K11737 cycA; D-serine/D-alanine/glycine transporter D HMPREF0733_10801 putative phenylalanine-specific permease K11738 ansP; L-asparagine permease D HMPREF0733_11559 proY; proline-specific permease ProY K16234 hutT; histidine transporter D HMPREF0733_11103 yedA; Carboxylate/Amino Acid/Amine Transporter K15269 pecM; probable blue pigment (indigoidine) exporter D HMPREF0733_10634 putative membrane protein K11939 rhtA; inner membrane transporter RhtA D HMPREF0733_10633 putative membrane protein K11939 rhtA; inner membrane transporter RhtA D HMPREF0733_10015 putative glucose uptake protein GlcU K05340 glcU; glucose uptake protein D HMPREF0733_10402 rarD; protein RarD K05786 rarD; chloramphenicol-sensitive protein RarD D HMPREF0733_10501 transporter, lactate permease (LctP) family K03303 lutP; lactate permease D HMPREF0733_11634 lctP; L-lactate permease K03303 lutP; lactate permease D HMPREF0733_11875 transporter, betaine/carnitine/choline family K05020 opuD; glycine betaine transporter D HMPREF0733_10344 tdt; C4-dicarboxylate transporter/malic acid transport protein K03304 tehA; tellurite resistance protein D HMPREF0733_10417 putP; sodium/proline symporter K11928 putP; sodium/proline symporter D HMPREF0733_11625 dctA; aerobic C4-dicarboxylate transport protein K11103 dctA; aerobic C4-dicarboxylate transport protein D HMPREF0733_10956 nhaA; Na+/H+ antiporter NhaA K03313 nhaA; Na+:H+ antiporter, NhaA family D HMPREF0733_11100 Na+/H+ antiporter K24163 nhaK; monovalent cation/hydrogen antiporter D HMPREF0733_10879 putative Na+/H+ antiporter K24163 nhaK; monovalent cation/hydrogen antiporter D HMPREF0733_10436 potassium uptake protein, TrkH family K03498 trkH; trk/ktr system potassium uptake protein D HMPREF0733_10437 TrkA N-terminal domain protein K03499 trkA; trk/ktr system potassium uptake protein D HMPREF0733_11771 TrkA N-terminal domain protein K03499 trkA; trk/ktr system potassium uptake protein D HMPREF0733_11772 TrkA N-terminal domain protein K03499 trkA; trk/ktr system potassium uptake protein D HMPREF0733_11163 putative permease K06901 pbuG; adenine/guanine/hypoxanthine permease D HMPREF0733_11162 putative permease K06901 pbuG; adenine/guanine/hypoxanthine permease D HMPREF0733_10439 chloride transporter, ClC family K03281 clcA; chloride channel protein, CIC family D HMPREF0733_10940 hypothetical protein K03325 ACR3; arsenite transporter D HMPREF0733_10915 mviN; integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase D HMPREF0733_10159 putative azaleucine resistance protein AzlC K26605 azlC; branched chain amino acid efflux pump D HMPREF0733_10160 Branched-chain amino acid transport protein (AzlD) K26606 azlD; branched chain amino acid efflux pump D HMPREF0733_11380 hypothetical protein K20469 K20469; putative heme transporter D HMPREF0733_11224 putative membrane protein K09125 yhhQ; queuosine precursor transporter D HMPREF0733_10535 membrane protein K22736 VIT; vacuolar iron transporter family protein D HMPREF0733_11670 putative cell division protein FtsW K03588 ftsW; cell division protein FtsW D HMPREF0733_11603 FTR1 family protein K07243 FTR; high-affinity iron transporter D HMPREF0733_11604 Imelysin K07224 efeO; iron uptake system component EfeO D HMPREF0733_11605 Tat-translocated enzyme K16301 efeB; deferrochelatase/peroxidase EfeB [EC:1.11.1.-] D HMPREF0733_10430 cytochrome C biogenesis protein transmembrane region K06196 ccdA; cytochrome c-type biogenesis protein D HMPREF0733_10324 nitrate reductase, alpha subunit K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-] D HMPREF0733_10323 narH; nitrate reductase, beta subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-] D HMPREF0733_10321 narI; respiratory nitrate reductase, gamma subunit K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-] D HMPREF0733_11434 chain length determinant protein K25588 K25588; tyrosine-protein kinase [EC:2.7.10.3] D HMPREF0733_11813 pnuC; nicotinamide mononucleotide transporter PnuC K03811 pnuC; nicotinamide mononucleotide transporter D HMPREF0733_11289 copper resistance protein CopC K07156 copC; copper resistance protein C C 02044 Secretion system [BR:rdn02044] D HMPREF0733_11387 peptidase, A24 family K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D HMPREF0733_10045 type II/IV secretion system protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D HMPREF0733_10463 type II/IV secretion system protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D HMPREF0733_10044 bacterial type II secretion system domain protein F K12510 tadB; tight adherence protein B D HMPREF0733_10462 bacterial type II secretion system domain protein F K12510 tadB; tight adherence protein B D HMPREF0733_10043 bacterial type II secretion system domain protein F K12511 tadC; tight adherence protein C D HMPREF0733_11678 hypothetical protein K02221 yggT; YggT family protein D HMPREF0733_11975 comEA protein K02237 comEA; competence protein ComEA D HMPREF0733_11974 ComEC/Rec2-like protein K02238 comEC; competence protein ComEC D HMPREF0733_10062 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D HMPREF0733_12017 secD; export membrane protein SecD K03072 secD; preprotein translocase subunit SecD D HMPREF0733_10349 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE D HMPREF0733_12016 secF; export membrane protein SecF K03074 secF; preprotein translocase subunit SecF D HMPREF0733_11877 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG D HMPREF0733_10282 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY D HMPREF0733_12122 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D HMPREF0733_12124 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D HMPREF0733_12018 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC D HMPREF0733_10907 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase D HMPREF0733_11946 tatA; twin arginine-targeting protein translocase, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA D HMPREF0733_10128 sec-independent translocase family protein K03117 tatB; sec-independent protein translocase protein TatB D HMPREF0733_11945 putative twin arginine-targeting protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC C 02042 Bacterial toxins [BR:rdn02042] D HMPREF0733_10025 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D HMPREF0733_10026 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family C 02022 Two-component system [BR:rdn02022] D HMPREF0733_11264 putative signal-transduction histidine kinase senX3 K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3] D HMPREF0733_11265 regX; sensory transduction protein RegX3 K07776 regX3; two-component system, OmpR family, response regulator RegX3 D HMPREF0733_10066 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3] D HMPREF0733_10067 mtrA; DNA-binding response regulator MtrA K07670 mtrA; two-component system, OmpR family, response regulator MtrA D HMPREF0733_10865 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D HMPREF0733_10553 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D HMPREF0733_10866 prrA; transcriptional regulatory protein PrrA K02483 K02483; two-component system, OmpR family, response regulator D HMPREF0733_10552 mprA; response regulator MprA K02483 K02483; two-component system, OmpR family, response regulator D HMPREF0733_10198 histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3] D HMPREF0733_11093 histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3] D HMPREF0733_10199 response regulator receiver domain protein K07693 desR; two-component system, NarL family, response regulator DesR D HMPREF0733_11094 response regulator receiver domain protein K07693 desR; two-component system, NarL family, response regulator DesR D HMPREF0733_10055 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3] D HMPREF0733_11828 response regulator receiver domain protein K22010 pdtaR; two-component system, response regulator PdtaR C 02035 Bacterial motility proteins [BR:rdn02035] D HMPREF0733_11387 peptidase, A24 family K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D HMPREF0733_10045 type II/IV secretion system protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D HMPREF0733_10463 type II/IV secretion system protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:rdn04812] D HMPREF0733_11674 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D HMPREF0733_10910 soj; sporulation initiation inhibitor protein Soj K03496 parA; chromosome partitioning protein D HMPREF0733_11626 soj; sporulation initiation inhibitor protein Soj K03496 parA; chromosome partitioning protein D HMPREF0733_11651 CobQ/CobB/MinD/ParA nucleotide binding domain protein K03496 parA; chromosome partitioning protein D HMPREF0733_10911 ParB-like protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:rdn04147] D HMPREF0733_11367 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D HMPREF0733_10822 gap; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D HMPREF0733_11870 gap; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D HMPREF0733_11871 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D HMPREF0733_11827 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D HMPREF0733_10888 cypB; peptidyl-prolyl cis-trans isomerase B K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D HMPREF0733_10247 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D HMPREF0733_10572 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D HMPREF0733_11327 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D HMPREF0733_10146 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D HMPREF0733_10245 IMP dehydrogenase family protein K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D HMPREF0733_10246 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D HMPREF0733_10308 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu D HMPREF0733_11916 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D HMPREF0733_10741 sodium bile acid symporter family protein K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7 D HMPREF0733_10618 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D HMPREF0733_11612 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D HMPREF0733_11653 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D HMPREF0733_10281 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D HMPREF0733_11613 putative adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D HMPREF0733_10882 putative galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D HMPREF0733_11642 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D HMPREF0733_10013 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D HMPREF0733_11691 glutamine synthetase, beta-grasp domain protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D HMPREF0733_10108 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D HMPREF0733_11348 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D HMPREF0733_10005 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D HMPREF0733_10074 etfA; electron transfer flavoprotein FAD-binding domain protein K03522 fixB; electron transfer flavoprotein alpha subunit D HMPREF0733_11884 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D HMPREF0733_11873 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D HMPREF0733_11263 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] C 02048 Prokaryotic defense system [BR:rdn02048] D HMPREF0733_12110 cas3; CRISPR-associated helicase Cas3, Anaes-subtype K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] D HMPREF0733_12108 cas4; CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] D HMPREF0733_12112 putative CRISPR-associated protein, GSU0053 family K19131 csb1; CRISPR-associated protein Csb1 D HMPREF0733_12111 CRISPR-associated protein, GSU0054 family (Cas_GSU0054) K19132 csb2; CRISPR-associated protein Csb2 D HMPREF0733_12109 hypothetical protein K19133 csb3; CRISPR-associated protein Csb3 D HMPREF0733_11854 helicase C-terminal domain protein K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D HMPREF0733_11857 type I restriction modification DNA specificity domain protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D HMPREF0733_11858 N-6 DNA Methylase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D HMPREF0733_10120 DNA (cytosine-5-)-methyltransferase K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72] D HMPREF0733_12160 ATPase family associated with various cellular activities (AAA) K07452 mcrB; 5-methylcytosine-specific restriction enzyme B [EC:3.1.21.-] D HMPREF0733_11698 addiction module toxin, Txe/YoeB family K19158 yoeB; toxin YoeB [EC:3.1.-.-] D HMPREF0733_11694 prevent-host-death family protein K19159 yefM; antitoxin YefM D HMPREF0733_11697 prevent-host-death family protein K19159 yefM; antitoxin YefM D HMPREF0733_10562 higA; addiction module antidote protein HigA K21498 higA-1; antitoxin HigA-1 D HMPREF0733_10590 PIN domain protein K07062 fitB; toxin FitB [EC:3.1.-.-] D HMPREF0733_11674 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D HMPREF0733_10416 gluQ; glutamyl-queuosine tRNA(Asp) synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D HMPREF0733_12184 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D HMPREF0733_10071 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels [BR:rdn04040] C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules C 01504 Antimicrobial resistance genes [BR:rdn01504] D HMPREF0733_10091 phosphotransferase enzyme family K06979 mph; macrolide phosphotransferase D HMPREF0733_10975 transporter, major facilitator family protein K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein D HMPREF0733_10266 serine-type D-Ala-D-Ala carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D HMPREF0733_11111 MATE efflux family protein K18908 mepA; MATE family, multidrug efflux pump D HMPREF0733_11113 MATE efflux family protein K18908 mepA; MATE family, multidrug efflux pump C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins [BR:rdn00536] C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:rdn03100] D HMPREF0733_t10014 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D HMPREF0733_t10015 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D HMPREF0733_t10039 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D HMPREF0733_t10022 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D HMPREF0733_t10036 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D HMPREF0733_t10008 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D HMPREF0733_t10030 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D HMPREF0733_t10027 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D HMPREF0733_t10019 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D HMPREF0733_t10032 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D HMPREF0733_t10045 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D HMPREF0733_t10026 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D HMPREF0733_t10034 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D HMPREF0733_t10044 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D HMPREF0733_t10018 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D HMPREF0733_t10041 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D HMPREF0733_t10024 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D HMPREF0733_t10031 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D HMPREF0733_t10046 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D HMPREF0733_t10035 tRNA-His K14226 tRNA-His; tRNA His D HMPREF0733_t10016 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D HMPREF0733_t10049 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D HMPREF0733_t10017 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D HMPREF0733_t10037 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D HMPREF0733_t10038 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D HMPREF0733_t10025 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D HMPREF0733_t10013 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D HMPREF0733_t10048 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D HMPREF0733_t10047 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D HMPREF0733_t10028 tRNA-Met K14230 tRNA-Met; tRNA Met D HMPREF0733_t10001 tRNA-Met K14230 tRNA-Met; tRNA Met D HMPREF0733_t10004 tRNA-Met K14230 tRNA-Met; tRNA Met D HMPREF0733_t10020 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D HMPREF0733_t10040 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D HMPREF0733_t10029 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D HMPREF0733_t10007 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D HMPREF0733_t10011 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D HMPREF0733_t10021 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D HMPREF0733_t10010 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D HMPREF0733_t10012 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D HMPREF0733_t10003 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D HMPREF0733_t10005 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D HMPREF0733_t10009 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D HMPREF0733_t10023 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D HMPREF0733_t10002 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D HMPREF0733_t10006 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D HMPREF0733_t10043 tRNA-Val K14237 tRNA-Val; tRNA Val D HMPREF0733_t10033 tRNA-Val K14237 tRNA-Val; tRNA Val D HMPREF0733_t10042 tRNA-Val K14237 tRNA-Val; tRNA Val D HMPREF0733_r10003 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D HMPREF0733_r10008 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D HMPREF0733_r10005 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D HMPREF0733_r10004 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D HMPREF0733_r10006 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D HMPREF0733_r10009 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D HMPREF0733_r10001 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D HMPREF0733_r10002 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D HMPREF0733_r10007 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D HMPREF0733_r10010 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D HMPREF0733nc10003 Bacterial signal recognition particle RNA K01983 ffs; SRP RNA D HMPREF0733nc10007 Bacterial RNase P class A K01978 rnpB; M1 RNA D HMPREF0733nc10001 tmRNA K15035 ssrA; transfer-messenger RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D HMPREF0733_12209 mycothiol-dependent formaldehyde dehydrogenase K00153 E1.1.1.306; S-(hydroxymethyl)mycothiol dehydrogenase [EC:1.1.1.306] D HMPREF0733_10085 akr5f; organophosphate reductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346] D HMPREF0733_11338 dkgA; 2,5-diketo-D-gluconic acid reductase A K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346] D HMPREF0733_12129 NAD dependent epimerase/dehydratase family protein K22320 oleD; 2-alkyl-3-oxoalkanoate reductase [EC:1.1.1.412] D HMPREF0733_11054 oxidoreductase, aldo/keto reductase family protein K23107 yajO; 1-deoxyxylulose-5-phosphate synthase [EC:1.1.-.-] D HMPREF0733_11483 flavoprotein disulfide reductase K23842 lpdA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D HMPREF0733_10830 GroES-like protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D HMPREF0733_11701 GroES-like protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D HMPREF0733_10824 flavodoxin-like protein K03923 mdaB; NADPH dehydrogenase (quinone) [EC:1.6.5.10] D HMPREF0733_11108 flavodoxin-like protein K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17] D HMPREF0733_11652 mycothione reductase K17883 mtr; mycothione reductase [EC:1.8.1.15] D HMPREF0733_11788 msrA; peptide-methionine (S)-S-oxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D HMPREF0733_11778 msrB; methionine-R-sulfoxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] D HMPREF0733_10490 oxidoreductase molybdopterin binding domain protein K07147 msrP; methionine sulfoxide reductase catalytic subunit [EC:1.8.-.-] D HMPREF0733_11291 putative Tat-translocated enzyme K15733 E1.11.1.19; dye decolorizing peroxidase [EC:1.11.1.19] D HMPREF0733_12204 putative peroxiredoxin bcp K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D HMPREF0733_10162 redoxin family protein K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D HMPREF0733_11142 ahpD; alkyl hydroperoxide reductase AhpD K04756 ahpD; lipoyl-dependent peroxiredoxin subunit D [EC:1.11.1.28] D HMPREF0733_11143 antioxidant, AhpC/TSA family K24126 ahpC; lipoyl-dependent peroxiredoxin subunit C [EC:1.11.1.28] D HMPREF0733_11238 Dyp-type peroxidase family protein K07223 yfeX; porphyrinogen peroxidase [EC:1.11.1.-] D HMPREF0733_11251 oxidoreductase NAD-binding domain protein K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17] D HMPREF0733_11158 FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family K20938 ladA; long-chain alkane monooxygenase [EC:1.14.14.28] D HMPREF0733_12107 antibiotic biosynthesis monooxygenase K21481 mhuD; heme oxygenase (mycobilin-producing) [EC:1.14.99.57] D HMPREF0733_11167 putative NADPH-ferredoxin reductase FprA K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D HMPREF0733_10884 glutaredoxin K18917 mrx1; mycoredoxin [EC:1.20.4.3] D HMPREF0733_11756 putative protease synthase and sporulation negative regulatory protein PAI 1 K22441 paiA; diamine N-acetyltransferase [EC:2.3.1.57] D HMPREF0733_10621 nodulation protein L K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79] D HMPREF0733_10355 mshD; mycothiol biosynthesis acetyltransferase K15520 mshD; mycothiol synthase [EC:2.3.1.189] D HMPREF0733_10613 hypothetical protein K22463 afsA; 2-oxo-3-(phosphooxy)propyl 3-oxoalkanoate synthase [EC:2.3.1.277] D HMPREF0733_12127 3-oxoacyl-(acyl carrier protein) synthase III K22317 oleA; acyl-CoA:acyl-CoA alkyltransferase [EC:2.3.3.20] D HMPREF0733_10257 glycosyltransferase, group 1 family protein K15521 mshA; D-inositol-3-phosphate glycosyltransferase [EC:2.4.1.250] D HMPREF0733_11824 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D HMPREF0733_12137 hypothetical protein K07030 fakA; fatty acid kinase [EC:2.7.2.18] D HMPREF0733_11692 glnE; [glutamate--ammonia-ligase] adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89] D HMPREF0733_10697 hypothetical protein K07067 disA; diadenylate cyclase [EC:2.7.7.85] D HMPREF0733_10464 pyruvate phosphate dikinase, PEP/pyruvate binding domain protein K22579 rph; rifampicin phosphotransferase [EC:2.7.9.6] D HMPREF0733_11654 putative thermostable monoacylglycerol lipase K03928 yvaK; carboxylesterase [EC:3.1.1.1] D HMPREF0733_11227 thioesterase family protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D HMPREF0733_10121 PHP domain protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97] D HMPREF0733_10646 putative phosphohistidine phosphatase SixA K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-] D HMPREF0733_11404 hydrolase, TatD family K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D HMPREF0733_11728 hypothetical protein K07503 nucS; endonuclease [EC:3.1.-.-] D HMPREF0733_10617 phage lysozyme K01185 E3.2.1.17; lysozyme [EC:3.2.1.17] D HMPREF0733_11178 hypothetical protein K09935 ybiA; N-glycosidase YbiA [EC:3.2.2.-] D HMPREF0733_10347 N-acetylmuramoyl-L-alanine amidase K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D HMPREF0733_12177 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D HMPREF0733_11793 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D HMPREF0733_10141 N-acetylglucosaminylphosphatidylinositol deacetylase K15525 mshB; N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase [EC:3.5.1.103] D HMPREF0733_12057 polysaccharide deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104] D HMPREF0733_11384 mca; mycothiol conjugate amidase Mca K18455 mca; mycothiol S-conjugate amidase [EC:3.5.1.115] D HMPREF0733_11069 lanM; type 2 lantibiotic biosynthesis protein LanM K27862 lanM; class II lanthipeptide synthase [EC:3.13.2.4] D HMPREF0733_12128 AMP-binding enzyme K25044 oleBC; cis-3-alkyl-4-acyloxetan-2-one decarboxylase / olefin beta-lactone synthetase [EC:4.1.1.114 6.1.3.1] D HMPREF0733_10261 putative YjeF domain protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D HMPREF0733_11956 mshC; cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase K15526 mshC; L-cysteine:1D-myo-inositol 2-amino-2-deoxy-alpha-D-glucopyranoside ligase [EC:6.3.1.13] D HMPREF0733_10239 copper-exporting ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9] D HMPREF0733_11205 E1-E2 ATPase K12952 ctpE; cation-transporting P-type ATPase E [EC:7.2.2.-] C 99981 Carbohydrate metabolism D HMPREF0733_12030 hypothetical protein K18928 lldE; L-lactate dehydrogenase complex protein LldE D HMPREF0733_10500 cysteine-rich domain protein K18928 lldE; L-lactate dehydrogenase complex protein LldE D HMPREF0733_10499 iron-sulfur cluster-binding protein K18929 lldF; L-lactate dehydrogenase complex protein LldF D HMPREF0733_10498 hypothetical protein K00782 lldG; L-lactate dehydrogenase complex protein LldG C 99982 Energy metabolism D HMPREF0733_11445 SUF system FeS assembly protein, NifU family K04488 iscU; nitrogen fixation protein NifU and related proteins D HMPREF0733_10075 electron transfer flavoprotein domain protein K03521 fixA; electron transfer flavoprotein beta subunit D HMPREF0733_10560 pyridine nucleotide-disulfide oxidoreductase K21739 rclA; probable pyridine nucleotide-disulfide oxidoreductase C 99983 Lipid metabolism D HMPREF0733_11976 EDD domain protein, DegV family K25232 fakB; fatty acid kinase fatty acid binding subunit C 99984 Nucleotide metabolism D HMPREF0733_12053 nrdI; nrdI protein K03647 nrdI; protein involved in ribonucleotide reduction C 99985 Amino acid metabolism D HMPREF0733_11676 pyridoxal phosphate enzyme, YggS family K06997 yggS; PLP dependent protein C 99986 Glycan metabolism D HMPREF0733_11502 Transglycosylase-like domain protein K21687 rpfA; resuscitation-promoting factor RpfA D HMPREF0733_11406 LPS glycosyltransferase K07270 K07270; glycosyl transferase, family 25 C 99987 Cofactor metabolism C 99988 Secondary metabolism C 99999 Others D HMPREF0733_11374 DoxX family protein K15977 K15977; putative oxidoreductase D HMPREF0733_11519 phospholipase/carboxylesterase K06999 K06999; phospholipase/carboxylesterase B B 09192 Unclassified: genetic information processing C 99973 Transcription D HMPREF0733_11337 Tex-like protein N-terminal domain protein K06959 tex; protein Tex C 99974 Translation C 99975 Protein processing D HMPREF0733_11739 clpS; ATP-dependent Clp protease adaptor protein ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS D HMPREF0733_12098 tig; trigger factor K03545 tig; trigger factor D HMPREF0733_10037 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein D HMPREF0733_12054 glutaredoxin K06191 nrdH; glutaredoxin-like protein NrdH D HMPREF0733_11805 Mg chelatase-like protein K07391 comM; magnesium chelatase family protein D HMPREF0733_10158 OsmC-like protein K07397 yhfA; putative redox protein D HMPREF0733_10429 ResB-like protein K07399 resB; cytochrome c biogenesis protein C 99976 Replication and repair D HMPREF0733_11640 base excision DNA repair protein, HhH-GPD family K07457 K07457; endonuclease III related protein D HMPREF0733_11981 hypothetical protein K07459 ybjD; putative ATP-dependent endonuclease of the OLD family D HMPREF0733_11804 hypothetical protein K07460 yraN; putative endonuclease D HMPREF0733_11806 dprA; DNA protecting protein DprA K04096 smf; DNA processing protein D HMPREF0733_12009 recombination factor protein RarA K07478 ycaJ; putative ATPase D HMPREF0733_11180 transposase K07485 K07485; transposase C 99979 Viral proteins C 99998 Others D HMPREF0733_10081 PspA/IM30 family protein K03969 pspA; phage shock protein A B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D HMPREF0733_11226 putative aromatic amino acid transport protein AroP K03293 TC.AAT; amino acid transporter, AAT family D HMPREF0733_10809 amino acid/peptide transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family D HMPREF0733_10690 phosphate transporter family protein K03306 TC.PIT; inorganic phosphate transporter, PiT family D HMPREF0733_10895 phosphate transporter family protein K03306 TC.PIT; inorganic phosphate transporter, PiT family D HMPREF0733_10404 Tat pathway signal sequence domain protein K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family D HMPREF0733_10954 agcS; amino acid carrier protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D HMPREF0733_12042 sODIT; 2-oxoglutarate/malate translocator K03319 TC.DASS; divalent anion:Na+ symporter, DASS family C 99978 Cell growth D HMPREF0733_11422 hypothetical protein K06320 cgeB; spore maturation protein CgeB D HMPREF0733_10908 R3H domain protein K06346 jag; spoIIIJ-associated protein C 99993 Cell motility C 99995 Signaling proteins D HMPREF0733_11035 bacterial stress protein K05795 terD; tellurium resistance protein TerD D HMPREF0733_11037 hypothetical protein K05795 terD; tellurium resistance protein TerD D HMPREF0733_11033 bacterial stress protein K05791 terZ; tellurium resistance protein TerZ D HMPREF0733_10142 typA; GTP-binding protein TypA K06207 typA; GTP-binding protein D HMPREF0733_11257 ACT domain protein K07166 K07166; ACT domain-containing protein D HMPREF0733_11963 ybeZ; PhoH-like protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins D HMPREF0733_10393 hypothetical protein K09767 yajQ; cyclic-di-GMP-binding protein C 99992 Structural proteins D HMPREF0733_11812 glycosyl hydrolase family 25 K07273 acm; lysozyme C 99994 Others B B 09194 Poorly characterized C 99996 General function prediction only D HMPREF0733_10016 acetyltransferase, GNAT family K02348 elaA; ElaA protein D HMPREF0733_10017 acetyltransferase, GNAT family K02348 elaA; ElaA protein D HMPREF0733_10459 putative DEAH-box helicase K06877 K06877; DEAD/DEAH box helicase domain-containing protein D HMPREF0733_12104 protozoan/cyanobacterial globin family protein K06886 glbN; hemoglobin D HMPREF0733_10534 cation diffusion facilitator family transporter K06994 K06994; putative drug exporter of the RND superfamily D HMPREF0733_10862 hypothetical protein K06994 K06994; putative drug exporter of the RND superfamily D HMPREF0733_10863 hypothetical protein K06994 K06994; putative drug exporter of the RND superfamily D HMPREF0733_10612 HAD hydrolase, family IA, variant 3 K07025 K07025; putative hydrolase of the HAD superfamily D HMPREF0733_11892 sufB; FeS assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB D HMPREF0733_11893 sufD; FeS assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD D HMPREF0733_12207 YihY family protein K07058 K07058; membrane protein D HMPREF0733_10457 rhodanese-like protein K07146 K07146; UPF0176 protein D HMPREF0733_10666 SNARE-like domain protein K03975 dedA; membrane-associated protein D HMPREF0733_10662 YhgE/Pip domain protein K01421 yhgE; putative membrane protein D HMPREF0733_10709 hypothetical protein K08981 K08981; putative membrane protein D HMPREF0733_11635 hypothetical protein K08987 K08987; putative membrane protein D HMPREF0733_11165 hypothetical protein K08996 yagU; putative membrane protein D HMPREF0733_11159 hypothetical protein K09858 K09858; SEC-C motif domain protein C 99997 Function unknown D HMPREF0733_11611 ankyrin repeat protein K06867 K06867; uncharacterized protein D HMPREF0733_11134 CoA binding domain protein K06929 K06929; uncharacterized protein D HMPREF0733_12118 KH domain family protein K06960 K06960; uncharacterized protein D HMPREF0733_11543 acetyltransferase, GNAT family K06976 K06976; uncharacterized protein D HMPREF0733_10451 hypothetical protein K07005 K07005; uncharacterized protein D HMPREF0733_11730 hypothetical protein K07018 K07018; uncharacterized protein D HMPREF0733_10761 nucleotidyltransferase domain protein K07075 K07075; uncharacterized protein D HMPREF0733_11254 nucleotidyltransferase domain protein K07075 K07075; uncharacterized protein D HMPREF0733_11841 NAD dependent epimerase/dehydratase family protein K07118 K07118; uncharacterized protein D HMPREF0733_10849 oxidoreductase, short chain dehydrogenase/reductase family protein K07124 K07124; uncharacterized protein D HMPREF0733_12063 oxidoreductase, short chain dehydrogenase/reductase family protein K07124 K07124; uncharacterized protein D HMPREF0733_10906 conserved hypothetical protein YidD K08998 K08998; uncharacterized protein D HMPREF0733_11370 hypothetical protein K09009 K09009; uncharacterized protein D HMPREF0733_11369 hypothetical protein K09009 K09009; uncharacterized protein D HMPREF0733_10086 hypothetical protein K09118 K09118; uncharacterized protein D HMPREF0733_11258 hypothetical protein K09157 K09157; uncharacterized protein D HMPREF0733_10710 hypothetical protein K09167 K09167; uncharacterized protein D HMPREF0733_11496 hypothetical protein K09780 K09780; uncharacterized protein D HMPREF0733_11034 hypothetical protein K09799 K09799; uncharacterized protein D HMPREF0733_11792 hypothetical protein K09861 K09861; uncharacterized protein D HMPREF0733_11115 hypothetical protein K09940 K09940; uncharacterized protein D HMPREF0733_11121 hypothetical protein K09940 K09940; uncharacterized protein D HMPREF0733_11968 hypothetical protein K09940 K09940; uncharacterized protein D HMPREF0733_11164 hypothetical protein K09956 K09956; uncharacterized protein D HMPREF0733_10689 hypothetical protein K07220 K07220; uncharacterized protein D HMPREF0733_11547 hypothetical protein K07742 ylxR; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: September 21, 2024