+D GENES KO
#
KEGG Orthology (KO) - Roseateles depolymerans
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:rdp00010]
D RD2015_3675 RpiR family transcriptional regulator K00845 glk; glucokinase [EC:2.7.1.2]
D RD2015_3130 Glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D RD2015_994 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RD2015_1612 fructose-1 6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D RD2015_618 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RD2015_3010 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D RD2015_4531 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RD2015_613 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D RD2015_4113 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D RD2015_4466 phosphoglycerate mutase K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D RD2015_2836 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RD2015_616 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RD2015_1523 Phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D RD2015_1335 pyruvate dehydrogenase K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D RD2015_1336 Acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D RD2015_1337 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RD2015_1475 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RD2015_2451 S-(Hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D RD2015_3384 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D RD2015_515 aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D RD2015_1980 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RD2015_1620 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RD2015_2632 Aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D RD2015_2675 Aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D RD2015_427 Aldose 1-epimerase K01792 E5.1.3.15; glucose-6-phosphate 1-epimerase [EC:5.1.3.15]
D RD2015_196 phosphoenolpyruvate carboxykinase K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
C 00020 Citrate cycle (TCA cycle) [PATH:rdp00020]
D RD2015_2753 type II citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D RD2015_1831 aconitate hydratase K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D RD2015_2765 Aconitate hydratase 2 K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D RD2015_3296 Isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D RD2015_776 2-oxoglutarate dehydrogenase K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D RD2015_1467 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D RD2015_1473 2-oxoglutarate dehydrogenase E1 K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D RD2015_1474 dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D RD2015_1337 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RD2015_1475 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RD2015_4701 Succinyl-CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D RD2015_4702 Succinyl-CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D RD2015_2756 Succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D RD2015_2755 Succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D RD2015_2758 succinate dehydrogenase K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D RD2015_2757 succinate dehydrogenase K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D RD2015_1973 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D RD2015_684 Fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D RD2015_897 Fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D RD2015_2760 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D RD2015_196 phosphoenolpyruvate carboxykinase K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D RD2015_1335 pyruvate dehydrogenase K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D RD2015_1336 Acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:rdp00030]
D RD2015_994 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RD2015_992 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D RD2015_508 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D RD2015_4530 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RD2015_993 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D RD2015_1928 Ribose-5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D RD2015_1900 Deoxyribose-phosphate aldolase DeoC K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D RD2015_2751 ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D RD2015_1097 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D RD2015_4114 Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D RD2015_2382 phosphogluconate dehydratase K01690 edd; phosphogluconate dehydratase [EC:4.2.1.12]
D RD2015_2383 2-dehydro-3-deoxyphosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D RD2015_32 Glucose 1-dehydrogenase K00034 gdh; glucose 1-dehydrogenase [EC:1.1.1.47]
D RD2015_1314 glucose dehydrogenase K00117 gcd; quinoprotein glucose dehydrogenase [EC:1.1.5.2]
D RD2015_3026 Choline dehydrogenase-related flavoprotein K06151 E1.1.99.3A; gluconate 2-dehydrogenase alpha chain [EC:1.1.99.3]
D RD2015_3027 Exported protein K06152 E1.1.99.3G; gluconate 2-dehydrogenase gamma chain [EC:1.1.99.3]
D RD2015_3892 Lactate dehydrogenase-like oxidoreductase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D RD2015_2973 Carbohydrate kinase K00851 idnK; gluconokinase [EC:2.7.1.12]
D RD2015_2577 2-dehydro-3-deoxygluconokinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D RD2015_3967 hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D RD2015_618 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RD2015_1612 fructose-1 6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
C 00040 Pentose and glucuronate interconversions [PATH:rdp00040]
D RD2015_2328 Pectate lyase K22539 PLY; pectate lyase [EC:4.2.2.2]
D RD2015_2525 pectate lyase K01728 pel; pectate lyase [EC:4.2.2.2]
D RD2015_2565 Pectate lyase K01728 pel; pectate lyase [EC:4.2.2.2]
D RD2015_1078 pectate lyase K01728 pel; pectate lyase [EC:4.2.2.2]
D RD2015_2566 Oligogalacturonate lyase K01730 ogl; oligogalacturonide lyase [EC:4.2.2.6]
D RD2015_2573 pectin degradation protein K26933 kdgF; unsaturated pyranuronate lyase [EC:4.2.99.25]
D RD2015_2572 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase K01815 kduI; 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [EC:5.3.1.17]
D RD2015_2571 2-deoxy-D-gluconate 3-dehydrogenase K00065 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase [EC:1.1.1.127]
D RD2015_3865 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D RD2015_2789 UTP-glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D RD2015_508 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D RD2015_2442 xylulokinase K00854 xylB; xylulokinase [EC:2.7.1.17]
D RD2015_2606 Xylulose kinase K00854 xylB; xylulokinase [EC:2.7.1.17]
D RD2015_2607 Xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D RD2015_1535 Mannitol dehydrogenase, C-terminal domain K00007 dalD; D-arabinitol 4-dehydrogenase [EC:1.1.1.11]
D RD2015_2630 Short-chain alcohol dehydrogenase like protein K22185 xylB; D-xylose 1-dehydrogenase [EC:1.1.1.175]
D RD2015_2628 Aldehyde dehydrogenase family protein K22187 xylA; alpha-ketoglutaric semialdehyde dehydrogenase [EC:1.2.1.-]
D RD2015_2441 fuculose phosphate aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
C 00051 Fructose and mannose metabolism [PATH:rdp00051]
D RD2015_3057 Sugar kinase, ribokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D RD2015_1537 PfkB protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D RD2015_3436 sugar kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D RD2015_3857 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D RD2015_2347 Phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D RD2015_2441 fuculose phosphate aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
D RD2015_1612 fructose-1 6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D RD2015_2607 Xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D RD2015_1535 Mannitol dehydrogenase, C-terminal domain K00007 dalD; D-arabinitol 4-dehydrogenase [EC:1.1.1.11]
D RD2015_618 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RD2015_3010 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D RD2015_4437 PTS fructose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
C 00052 Galactose metabolism [PATH:rdp00052]
D RD2015_2632 Aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D RD2015_2675 Aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D RD2015_2683 Galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D RD2015_2682 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D RD2015_3856 UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RD2015_4044 NAD-dependent epimerase/dehydratase family protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RD2015_4049 dTDP-glucose 4,6-dehydratase, epimerase domain protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RD2015_2789 UTP-glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D RD2015_3675 RpiR family transcriptional regulator K00845 glk; glucokinase [EC:2.7.1.2]
D RD2015_3130 Glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D RD2015_2681 beta-galactosidase K12308 bgaB; beta-galactosidase [EC:3.2.1.23]
D RD2015_2680 hypothetical protein K12308 bgaB; beta-galactosidase [EC:3.2.1.23]
D RD2015_1852 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D RD2015_1133 Glycosyl hydrolases 31 family protein K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D RD2015_1129 D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit K16371 gatZ-kbaZ; D-tagatose-1,6-bisphosphate aldolase subunit GatZ/KbaZ
D RD2015_1128 tagatose-6-phosphate ketose isomerase K02082 agaS; D-galactosamine 6-phosphate deaminase/isomerase [EC:3.5.99.-]
C 00053 Ascorbate and aldarate metabolism [PATH:rdp00053]
D RD2015_3865 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D RD2015_3866 NAD-dependent epimerase/dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D RD2015_3971 glucarate dehydratase K01706 gudD; glucarate dehydratase [EC:4.2.1.40]
D RD2015_3969 alpha-dehydro-beta-deoxy-D-glucarate aldolase K01630 garL; 2-dehydro-3-deoxyglucarate aldolase [EC:4.1.2.20]
D RD2015_2631 gluconolaconase K13874 araB; L-arabinonolactonase [EC:3.1.1.15]
D RD2015_2616 dihydroxy-acid dehydratase K13875 araC; L-arabonate dehydrase [EC:4.2.1.25]
D RD2015_2629 Dihydrodipicolinate synthetase family protein K13876 araD; 2-keto-3-deoxy-L-arabinonate dehydratase [EC:4.2.1.43]
D RD2015_4176 D-galactarate dehydratase K01708 garD; galactarate dehydratase [EC:4.2.1.42]
D RD2015_2181 NAD-dependent epimerase/dehydratase K18981 udh; uronate dehydrogenase [EC:1.1.1.203]
C 00500 Starch and sucrose metabolism [PATH:rdp00500]
D RD2015_2789 UTP-glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D RD2015_4475 Beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D RD2015_2813 Beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D RD2015_2615 cellulase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D RD2015_3374 Endoglucanase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D RD2015_3542 Cellulase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D RD2015_747 endoglucanase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D RD2015_749 Major extracellular endoglucanase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D RD2015_4037 Glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D RD2015_3660 glycogen branching protein K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D RD2015_3661 Glycogen phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D RD2015_3650 alpha-1,6-glucosidase K01200 pulA; pullulanase [EC:3.2.1.41]
D RD2015_699 Alpha-amylase K01176 AMY; alpha-amylase [EC:3.2.1.1]
D RD2015_3651 Alpha amylase catalytic region K01176 AMY; alpha-amylase [EC:3.2.1.1]
D RD2015_3666 Amylopullulanase K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135]
D RD2015_3658 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D RD2015_3659 Glycogen debranching enzyme K01214 ISA; isoamylase [EC:3.2.1.68]
D RD2015_2066 Trehalose 6-phosphate phosphatase K01087 otsB; trehalose 6-phosphate phosphatase [EC:3.1.3.12]
D RD2015_2067 Alpha,alpha-trehalose-phosphate synthase K16055 TPS; trehalose 6-phosphate synthase/phosphatase [EC:2.4.1.15 3.1.3.12]
D RD2015_3675 RpiR family transcriptional regulator K00845 glk; glucokinase [EC:2.7.1.2]
D RD2015_3130 Glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D RD2015_994 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RD2015_3057 Sugar kinase, ribokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D RD2015_1537 PfkB protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D RD2015_3436 sugar kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:rdp00520]
D RD2015_495 Chitinase K01183 E3.2.1.14; chitinase [EC:3.2.1.14]
D RD2015_1873 Glycosyl hydrolase K01183 E3.2.1.14; chitinase [EC:3.2.1.14]
D RD2015_31 Chitinase K01183 E3.2.1.14; chitinase [EC:3.2.1.14]
D RD2015_533 beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D RD2015_4010 beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D RD2015_531 N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D RD2015_529 ATPase BadF/BadG/BcrA/BcrD type K18676 gspK; glucosamine kinase [EC:2.7.1.8]
D RD2015_3057 Sugar kinase, ribokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D RD2015_1537 PfkB protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D RD2015_3436 sugar kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D RD2015_675 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D RD2015_532 iron dicitrate transport regulator FecR K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D RD2015_2137 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D RD2015_4269 Bifunctional protein GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D RD2015_288 N-acetylmuramic acid 6-phosphate etherase K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126]
D RD2015_935 Anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D RD2015_1868 2-phosphoglycolate phosphatase K22292 mupP; N-acetyl-D-muramate 6-phosphate phosphatase [EC:3.1.3.105]
D RD2015_4587 Aminoglycoside phosphotransferase K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221]
D RD2015_4529 Nucleoside-diphosphate-sugar pyrophosphorylase family protein K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99]
D RD2015_4808 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D RD2015_3575 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D RD2015_3863 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D RD2015_3858 UDP-N-acetyl-D-galactosamine dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
D RD2015_4065 Oxidoreductase domain protein K13020 wlbA; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335]
D RD2015_4063 Lipopolysaccharide biosynthesis protein K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
D RD2015_4064 Transferase hexapeptide repeat containing protein K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201]
D RD2015_4762 UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase K10012 arnC; undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [EC:2.4.2.53]
D RD2015_4759 Putative polysaccharide deacetylase K13014 arnD; undecaprenyl phosphate-alpha-L-ara4FN deformylase [EC:3.5.1.-]
D RD2015_2037 NAD-dependent epimerase/dehydratase family protein K08678 UXS1; UDP-glucuronate decarboxylase [EC:4.1.1.35]
D RD2015_3675 RpiR family transcriptional regulator K00845 glk; glucokinase [EC:2.7.1.2]
D RD2015_3130 Glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D RD2015_2789 UTP-glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D RD2015_3865 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D RD2015_2683 Galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D RD2015_2682 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D RD2015_3856 UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RD2015_4044 NAD-dependent epimerase/dehydratase family protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RD2015_4049 dTDP-glucose 4,6-dehydratase, epimerase domain protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RD2015_1852 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D RD2015_3866 NAD-dependent epimerase/dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D RD2015_4437 PTS fructose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D RD2015_994 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RD2015_2347 Phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D RD2015_3857 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D RD2015_2936 TDP-4-oxo-6-deoxy-D-glucose transaminase K13010 per; perosamine synthetase [EC:2.6.1.102]
D RD2015_4037 Glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D RD2015_4038 CDP-glucose 4,6-dehydratase K01709 rfbG; CDP-glucose 4,6-dehydratase [EC:4.2.1.45]
D RD2015_4039 lipopolysaccharide biosynthesis protein RfbH K12452 ascC; CDP-4-dehydro-6-deoxyglucose reductase, E1 [EC:1.17.1.1]
D RD2015_4036 CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1]
D RD2015_2795 Oxidoreductase FAD/NAD(P)-binding domain protein K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1]
C 00620 Pyruvate metabolism [PATH:rdp00620]
D RD2015_1980 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RD2015_1620 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RD2015_1335 pyruvate dehydrogenase K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D RD2015_1336 Acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D RD2015_1337 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RD2015_1475 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RD2015_3384 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D RD2015_2451 S-(Hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D RD2015_149 Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D RD2015_150 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D RD2015_616 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RD2015_3246 acetyl-CoA carboxylase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D RD2015_4152 Acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D RD2015_4153 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D RD2015_2300 acetyl-CoA carboxylase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D RD2015_2173 acetyl-CoA carboxylase K11263 bccA; acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14]
D RD2015_515 aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D RD2015_3729 L-lactate dehydrogenase K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3]
D RD2015_3333 2-hydroxyacid dehydrogenase K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28]
D RD2015_103 Putative FAD-linked oxidoreductase K00102 LDHD; D-lactate dehydrogenase (cytochrome) [EC:1.1.2.4]
D RD2015_4558 glyoxalase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D RD2015_2283 Methylmalonyl-CoA epimerase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D RD2015_310 glyoxalase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D RD2015_3743 hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D RD2015_4744 Beta-lactamase domain protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D RD2015_3892 Lactate dehydrogenase-like oxidoreductase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D RD2015_4580 malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D RD2015_615 malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D RD2015_2760 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D RD2015_1973 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D RD2015_684 Fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D RD2015_897 Fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D RD2015_3722 Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D RD2015_196 phosphoenolpyruvate carboxykinase K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D RD2015_1523 Phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D RD2015_4632 malate synthase K01638 aceB; malate synthase [EC:2.3.3.9]
D RD2015_1346 Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RD2015_1393 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RD2015_829 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RD2015_1443 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D RD2015_1444 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:rdp00630]
D RD2015_3164 isocitrate lyase K01637 ICL; isocitrate/methylisocitrate lyase [EC:4.1.3.1 4.1.3.30]
D RD2015_1980 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RD2015_1620 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RD2015_4632 malate synthase K01638 aceB; malate synthase [EC:2.3.3.9]
D RD2015_2760 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D RD2015_2753 type II citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D RD2015_1831 aconitate hydratase K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D RD2015_2765 Aconitate hydratase 2 K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D RD2015_1346 Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RD2015_1393 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RD2015_829 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RD2015_1347 Acetoacetyl-CoA reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D RD2015_2282 Acetyl-CoA carboxylase K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3]
D RD2015_2281 Carboxyl transferase K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D RD2015_2173 acetyl-CoA carboxylase K11263 bccA; acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14]
D RD2015_2279 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D RD2015_356 glycolate oxidase subunit GlcD K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]
D RD2015_355 FAD linked oxidase K11472 glcE; glycolate dehydrogenase FAD-binding subunit [EC:1.1.99.14]
D RD2015_354 Lactate utilization protein A K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14]
D RD2015_2074 catalase K03781 katE; catalase [EC:1.11.1.6]
D RD2015_153 Catalase K03781 katE; catalase [EC:1.11.1.6]
D RD2015_3892 Lactate dehydrogenase-like oxidoreductase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D RD2015_520 phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D RD2015_4003 HAD family hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D RD2015_2369 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RD2015_2966 glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D RD2015_2964 Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D RD2015_1337 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RD2015_1475 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RD2015_2965 Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D RD2015_3968 2-hydroxy-3-oxopropionate reductase K00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60]
D RD2015_3967 hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D RD2015_42 Tartrate dehydrogenase K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83]
D RD2015_2383 2-dehydro-3-deoxyphosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D RD2015_3456 Formate dehydrogenase, alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D RD2015_3457 sulfate ABC transporter substrate-binding protein K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D RD2015_3455 formate dehydrogenase-N subunit beta K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D RD2015_3454 Formate dehydrogenase, gamma subunit K00127 fdoI; formate dehydrogenase subunit gamma
D RD2015_3677 Kynurenine formamidase K07130 kynB; arylformamidase [EC:3.5.1.9]
D RD2015_1676 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D RD2015_3812 N-formylglutamate amidohydrolase K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68]
C 00640 Propanoate metabolism [PATH:rdp00640]
D RD2015_1980 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RD2015_1620 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RD2015_3038 acetyl-CoA synthetase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D RD2015_149 Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D RD2015_150 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D RD2015_1337 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RD2015_1475 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RD2015_831 butyryl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D RD2015_4068 hypothetical protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RD2015_3246 acetyl-CoA carboxylase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D RD2015_4152 Acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D RD2015_4153 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D RD2015_2300 acetyl-CoA carboxylase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D RD2015_2173 acetyl-CoA carboxylase K11263 bccA; acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14]
D RD2015_2860 omega amino acid--pyruvate aminotransferase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D RD2015_2282 Acetyl-CoA carboxylase K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3]
D RD2015_2281 Carboxyl transferase K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D RD2015_2279 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D RD2015_4702 Succinyl-CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D RD2015_4701 Succinyl-CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D RD2015_209 Methylmalonic acid semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D RD2015_2765 Aconitate hydratase 2 K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D RD2015_496 methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3]
D RD2015_3063 Aldehyde reductase K08325 yqhD; NADP-dependent alcohol dehydrogenase [EC:1.1.-.-]
C 00650 Butanoate metabolism [PATH:rdp00650]
D RD2015_1346 Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RD2015_1393 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RD2015_829 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RD2015_4472 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D RD2015_1392 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D RD2015_1192 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D RD2015_4068 hypothetical protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RD2015_831 butyryl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D RD2015_1345 Poly(R)-hydroxyalkanoic acid synthase, class I K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D RD2015_2003 esterase K05973 phaZ; poly(3-hydroxybutyrate) depolymerase [EC:3.1.1.75]
D RD2015_1347 Acetoacetyl-CoA reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D RD2015_42 Tartrate dehydrogenase K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83]
D RD2015_2756 Succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D RD2015_2755 Succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D RD2015_2758 succinate dehydrogenase K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D RD2015_2757 succinate dehydrogenase K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D RD2015_2548 aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D RD2015_1692 Succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D RD2015_3162 4-hydroxybutyrate dehydrogenase K00043 gbd; 4-hydroxybutyrate dehydrogenase [EC:1.1.1.61]
D RD2015_4338 Hydroxymethylglutaryl-CoA lyase YngG K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D RD2015_1938 succinyl-CoA:3-ketoacid-CoA transferase K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D RD2015_1939 putative succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D RD2015_2871 3-hydroxybutyrate dehydrogenase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30]
D RD2015_3390 D-beta-hydroxybutyrate dehydrogenase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30]
D RD2015_2872 putative acetoacetate decarboxylase K01574 adc; acetoacetate decarboxylase [EC:4.1.1.4]
D RD2015_3404 Thiamine pyrophosphate-dependent enzyme, possible carboligase or decarboxylase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RD2015_1439 acetolactate synthase 3 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RD2015_1440 acetolactate synthase K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:rdp00660]
D RD2015_3404 Thiamine pyrophosphate-dependent enzyme, possible carboligase or decarboxylase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RD2015_1439 acetolactate synthase 3 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RD2015_1440 acetolactate synthase K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D RD2015_4702 Succinyl-CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D RD2015_4701 Succinyl-CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D RD2015_2291 isopropylmalate isomerase K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D RD2015_2292 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D RD2015_2293 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:rdp00562]
D RD2015_2829 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D RD2015_336 3-phytase K01083 E3.1.3.8; 3-phytase [EC:3.1.3.8]
D RD2015_488 hypothetical protein K01114 plc; phospholipase C [EC:3.1.4.3]
D RD2015_744 phospholipase K01114 plc; phospholipase C [EC:3.1.4.3]
D RD2015_209 Methylmalonic acid semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D RD2015_3010 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:rdp00190]
D RD2015_3008 NADH-quinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D RD2015_3007 NADH dehydrogenase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D RD2015_3006 NADH-quinone oxidoreductase subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D RD2015_3005 NADH dehydrogenase K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D RD2015_3004 NADH dehydrogenase subunit E K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D RD2015_3003 NADH-quinone oxidoreductase, F subunit K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D RD2015_3002 NADH dehydrogenase subunit G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D RD2015_3001 NADH:ubiquinone oxidoreductase subunit H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D RD2015_3000 NADH-quinone oxidoreductase subunit I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D RD2015_2999 NADH:ubiquinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D RD2015_2998 NADH-quinone oxidoreductase subunit K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D RD2015_2997 NADH:ubiquinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D RD2015_2996 NADH dehydrogenase K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D RD2015_2995 NADH-quinone oxidoreductase subunit N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D RD2015_308 NADH dehydrogenase, FAD-containing subunit, protein cytochrome c reductase protein K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D RD2015_2756 Succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D RD2015_2755 Succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D RD2015_2758 succinate dehydrogenase K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D RD2015_2757 succinate dehydrogenase K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D RD2015_1295 Ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D RD2015_1296 cytochrome B K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D RD2015_1297 cytochrome C K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D RD2015_4092 Protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D RD2015_1163 Cytochrome ubiquinol oxidase subunit IV K02300 cyoD; cytochrome o ubiquinol oxidase subunit IV
D RD2015_4097 Cytochrome c oxidase subunit III K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D RD2015_2875 cytochrome C oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D RD2015_4101 Cytochrome-c oxidase K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D RD2015_2876 Heme/copper-type cytochrome/quinol oxidase, subunit 2 K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D RD2015_4102 Cytochrome c oxidase subunit 2 K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D RD2015_4099 cytochrome C oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D RD2015_4093 Cytochrome oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D RD2015_3304 Putative cytochrome C oxidase (Subunit I) transmembrane protein K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D RD2015_3303 Cbb3-type cytochrome c oxidase subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D RD2015_3302 hypothetical protein K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D RD2015_3301 Cbb3-type cytochrome c oxidase subunit K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D RD2015_1162 cytochrome o ubiquinol oxidase subunit III K02299 cyoC; cytochrome o ubiquinol oxidase subunit III
D RD2015_1161 cytochrome O ubiquinol oxidase K02298 cyoB; cytochrome o ubiquinol oxidase subunit I [EC:7.1.1.3]
D RD2015_1160 cytochrome O ubiquinol oxidase K02297 cyoA; cytochrome o ubiquinol oxidase subunit II [EC:7.1.1.3]
D RD2015_3278 Cytochrome D ubiquinol oxidase subunit K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D RD2015_3279 cytochrome BD ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D RD2015_2959 Cytochrome c, class I K08738 CYC; cytochrome c
D RD2015_420 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D RD2015_422 F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D RD2015_421 ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D RD2015_419 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D RD2015_423 ATP synthase F0F1 subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D RD2015_416 ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D RD2015_418 ATP synthase subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D RD2015_417 ATP synthase F0F1 subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D RD2015_1426 inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D RD2015_1639 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D RD2015_4292 Polyphosphate kinase 2, PA0141 family K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D RD2015_428 Putative polyphosphate kinase K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:rdp00710]
D RD2015_613 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D RD2015_4531 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RD2015_618 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RD2015_1612 fructose-1 6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D RD2015_4530 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RD2015_1928 Ribose-5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D RD2015_3010 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D RD2015_508 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D RD2015_993 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D RD2015_3722 Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D RD2015_4580 malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D RD2015_615 malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D RD2015_2760 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
C 00720 Other carbon fixation pathways [PATH:rdp00720]
D RD2015_1523 Phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D RD2015_3722 Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D RD2015_2760 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D RD2015_1973 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D RD2015_684 Fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D RD2015_897 Fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D RD2015_2756 Succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D RD2015_2755 Succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D RD2015_2758 succinate dehydrogenase K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D RD2015_2757 succinate dehydrogenase K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D RD2015_4701 Succinyl-CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D RD2015_4702 Succinyl-CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D RD2015_1346 Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RD2015_1393 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RD2015_829 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RD2015_3296 Isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D RD2015_1831 aconitate hydratase K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D RD2015_2765 Aconitate hydratase 2 K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D RD2015_3246 acetyl-CoA carboxylase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D RD2015_4152 Acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D RD2015_4153 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D RD2015_2300 acetyl-CoA carboxylase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D RD2015_2279 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D RD2015_1332 Bifunctional protein FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D RD2015_656 Methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D RD2015_150 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D RD2015_149 Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D RD2015_1980 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RD2015_1620 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
C 00680 Methane metabolism [PATH:rdp00680]
D RD2015_2451 S-(Hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D RD2015_402 S-formylglutathione hydrolase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12]
D RD2015_3456 Formate dehydrogenase, alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D RD2015_3457 sulfate ABC transporter substrate-binding protein K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D RD2015_3455 formate dehydrogenase-N subunit beta K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D RD2015_3454 Formate dehydrogenase, gamma subunit K00127 fdoI; formate dehydrogenase subunit gamma
D RD2015_2369 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RD2015_3967 hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D RD2015_2836 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RD2015_3722 Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D RD2015_2760 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D RD2015_618 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RD2015_1612 fructose-1 6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D RD2015_149 Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D RD2015_150 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D RD2015_1980 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RD2015_1620 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RD2015_1523 Phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D RD2015_4113 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D RD2015_4466 phosphoglycerate mutase K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D RD2015_1800 3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D RD2015_1863 Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D RD2015_3401 Phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 00910 Nitrogen metabolism [PATH:rdp00910]
D RD2015_4405 nitrate transporter K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D RD2015_4404 Bicarbonate transport system permease protein CmpB K15577 nrtB; nitrate/nitrite transport system permease protein
D RD2015_4403 Nitrate transport ATP-binding subunits C and D K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D RD2015_4400 Putative anaerobic dehydrogenase K00372 nasC; assimilatory nitrate reductase catalytic subunit [EC:1.7.99.-]
D RD2015_4402 Assimilatory nitrite reductase (NAD(P)H) large subunit K26139 nasD; nitrite reductase [NAD(P)H] large subunit [EC:1.7.1.4]
D RD2015_4401 NAD(P)H-dependent nitrite reductase, small subunit K26138 nasE; nitrite reductase [NAD(P)H] small subunit [EC:1.7.1.4]
D RD2015_2452 2-nitropropane dioxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D RD2015_771 2-nitropropane dioxygenase NPD K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D RD2015_1465 2-nitropropane dioxygenase NPD K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D RD2015_4834 glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D RD2015_977 glutamate synthase K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D RD2015_978 Glutamate synthase (NADH) small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D RD2015_3379 Cyanate hydratase K01725 cynS; cyanate lyase [EC:4.2.1.104]
D RD2015_827 Carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
D RD2015_1213 Carbonate dehydratase K01674 cah; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:rdp00920]
D RD2015_73 thiosulfate transporter subunit K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D RD2015_80 ABC transporter permease K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D RD2015_74 sulfate/thiosulfate transporter subunit K02046 cysU; sulfate/thiosulfate transport system permease protein
D RD2015_75 Sulfate ABC transporter permease K02047 cysW; sulfate/thiosulfate transport system permease protein
D RD2015_76 sulfate ABC transporter ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D RD2015_70 ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component K15553 ssuA; sulfonate transport system substrate-binding protein
D RD2015_68 Binding-protein-dependent transport system inner membrane component family protein 69 K15554 ssuC; sulfonate transport system permease protein
D RD2015_69 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D RD2015_3912 sulfate adenylyltransferase K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D RD2015_3911 sulfate adenylyltransferase K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D RD2015_3910 Thioredoxin-dependent adenylylsulfate APS reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D RD2015_4781 SoxAX cytochrome complex subunit A K17222 soxA; L-cysteine S-thiosulfotransferase [EC:2.8.5.2]
D RD2015_4778 Cytochrome C K17223 soxX; L-cysteine S-thiosulfotransferase [EC:2.8.5.2]
D RD2015_4779 Sulfur oxidation protein SoxY K17226 soxY; sulfur-oxidizing protein SoxY
D RD2015_4780 sulfur oxidation protein K17227 soxZ; sulfur-oxidizing protein SoxZ
D RD2015_4679 Oxidoreductase K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
D RD2015_3908 nitrite reductase K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
D RD2015_4548 NAD(FAD)-dependent dehydrogenase K17229 fccB; sulfide dehydrogenase [flavocytochrome c] flavoprotein chain [EC:1.8.2.3]
D RD2015_4547 cytochrome C553 K17230 fccA; cytochrome subunit of sulfide dehydrogenase
D RD2015_1644 Rhodanese domain protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D RD2015_2453 Serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D RD2015_3877 Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D RD2015_2827 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D RD2015_2894 Cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D RD2015_1209 Cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D RD2015_4593 homoserine acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D RD2015_2893 homoserine acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D RD2015_2305 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
D RD2015_1383 long-chain fatty acid--CoA ligase K20034 dmdB; 3-(methylthio)propionyl---CoA ligase [EC:6.2.1.44]
D RD2015_1464 acyl-CoA dehydrogenase K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
D RD2015_1190 acyl-CoA dehydrogenase K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:rdp00061]
D RD2015_3246 acetyl-CoA carboxylase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D RD2015_4152 Acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D RD2015_4153 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D RD2015_2300 acetyl-CoA carboxylase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D RD2015_2173 acetyl-CoA carboxylase K11263 bccA; acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14]
D RD2015_803 Phosphopantetheine-binding protein K02078 acpP; acyl carrier protein
D RD2015_4022 Acyl carrier protein K02078 acpP; acyl carrier protein
D RD2015_2932 acyl carrier protein K02078 acpP; acyl carrier protein
D RD2015_3339 Acyl transferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D RD2015_4024 ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D RD2015_4025 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D RD2015_863 Conserved hypothetical protein, Thiolase-like K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D RD2015_2652 hypothetical protein K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D RD2015_4021 3-oxoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D RD2015_3602 Short chain dehydrogenase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RD2015_2690 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RD2015_4023 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RD2015_1517 3-hydroxyacyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D RD2015_2913 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D RD2015_4432 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RD2015_4649 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RD2015_4804 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:rdp00071]
D RD2015_1346 Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RD2015_1393 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RD2015_829 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RD2015_1193 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D RD2015_4068 hypothetical protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RD2015_1392 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D RD2015_1192 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D RD2015_831 butyryl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D RD2015_4838 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D RD2015_3676 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D RD2015_4432 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RD2015_4649 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RD2015_4804 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RD2015_2451 S-(Hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D RD2015_3384 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
C 00073 Cutin, suberine and wax biosynthesis
C 00074 Mycolic acid biosynthesis [PATH:rdp00074]
D RD2015_2173 acetyl-CoA carboxylase K11263 bccA; acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14]
D RD2015_4011 Holo-[acyl-carrier-protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D RD2015_803 Phosphopantetheine-binding protein K02078 acpP; acyl carrier protein
D RD2015_4022 Acyl carrier protein K02078 acpP; acyl carrier protein
D RD2015_2932 acyl carrier protein K02078 acpP; acyl carrier protein
D RD2015_3339 Acyl transferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D RD2015_4024 ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:rdp00561]
D RD2015_3967 hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D RD2015_314 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D RD2015_4026 Phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D RD2015_1629 Glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D RD2015_4115 Phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D RD2015_4382 acyl-phosphate glycerol 3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D RD2015_1434 Diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D RD2015_880 Putative diacylglycerol O-acyltransferase tgs1 K00635 tgs; diacylglycerol O-acyltransferase / wax synthase [EC:2.3.1.20 2.3.1.75]
D RD2015_4431 Alpha/beta hydrolase family protein K01046 lip; triacylglycerol lipase [EC:3.1.1.3]
D RD2015_1133 Glycosyl hydrolases 31 family protein K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
C 00564 Glycerophospholipid metabolism [PATH:rdp00564]
D RD2015_4106 glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D RD2015_316 Glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D RD2015_1629 Glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D RD2015_4115 Phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D RD2015_4382 acyl-phosphate glycerol 3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D RD2015_1434 Diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D RD2015_488 hypothetical protein K01114 plc; phospholipase C [EC:3.1.4.3]
D RD2015_744 phospholipase K01114 plc; phospholipase C [EC:3.1.4.3]
D RD2015_291 Phospholipase K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D RD2015_839 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D RD2015_3979 Cytoplasmic glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D RD2015_1240 Phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D RD2015_1511 Phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D RD2015_344 CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D RD2015_1442 CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D RD2015_4139 phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D RD2015_4806 Phosphatidylserine decarboxylase proenzyme K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D RD2015_2113 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D RD2015_4576 phosphatidylglycerophosphatase K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27]
D RD2015_2410 hypothetical protein K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D RD2015_3819 phospholipase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D RD2015_3079 Cardiolipin synthase 2 K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
C 00565 Ether lipid metabolism [PATH:rdp00565]
D RD2015_291 Phospholipase K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D RD2015_488 hypothetical protein K01114 plc; phospholipase C [EC:3.1.4.3]
D RD2015_744 phospholipase K01114 plc; phospholipase C [EC:3.1.4.3]
C 00600 Sphingolipid metabolism [PATH:rdp00600]
D RD2015_2817 O-glycosyl hydrolase K01201 GBA; glucosylceramidase [EC:3.2.1.45]
D RD2015_1133 Glycosyl hydrolases 31 family protein K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
C 00590 Arachidonic acid metabolism
D RD2015_291 Phospholipase K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00591 Linoleic acid metabolism
D RD2015_291 Phospholipase K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00592 alpha-Linolenic acid metabolism [PATH:rdp00592]
D RD2015_291 Phospholipase K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D RD2015_1193 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids [PATH:rdp01040]
D RD2015_3188 aminotransferase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D RD2015_1375 Arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D RD2015_1198 Acyl-CoA hydrolase-like protein K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:rdp00230]
D RD2015_2993 Hydrolase, NUDIX family K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D RD2015_1097 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D RD2015_4114 Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D RD2015_2304 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D RD2015_3471 phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D RD2015_3192 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D RD2015_2747 phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D RD2015_3749 Phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D RD2015_633 N5-carboxyaminoimidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D RD2015_632 N5-carboxyaminoimidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D RD2015_620 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D RD2015_4605 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D RD2015_1244 Bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D RD2015_4840 Adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D RD2015_941 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D RD2015_2840 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D RD2015_2122 5'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D RD2015_1899 Purine nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D RD2015_1343 Laccase domain protein YfiH K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D RD2015_3358 inosine-5-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D RD2015_1485 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D RD2015_3708 hypothetical protein K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D RD2015_3963 Xanthine dehydrogenase small subunit K13481 xdhA; xanthine dehydrogenase small subunit [EC:1.17.1.4]
D RD2015_3964 Xanthine dehydrogenase, molybdopterin binding subunit K13482 xdhB; xanthine dehydrogenase large subunit [EC:1.17.1.4]
D RD2015_2709 Xanthine dehydrogenase K11177 yagR; xanthine dehydrogenase YagR molybdenum-binding subunit [EC:1.17.1.4]
D RD2015_841 aldehyde oxidase K11177 yagR; xanthine dehydrogenase YagR molybdenum-binding subunit [EC:1.17.1.4]
D RD2015_2708 xanthine dehydrogenase K11178 yagS; xanthine dehydrogenase YagS FAD-binding subunit [EC:1.17.1.4]
D RD2015_842 FAD-binding molybdopterin dehydrogenase K11178 yagS; xanthine dehydrogenase YagS FAD-binding subunit [EC:1.17.1.4]
D RD2015_2707 (2Fe-2S)-binding domain protein K13483 yagT; xanthine dehydrogenase YagT iron-sulfur-binding subunit
D RD2015_843 (2Fe-2S)-binding protein K13483 yagT; xanthine dehydrogenase YagT iron-sulfur-binding subunit
D RD2015_3356 GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D RD2015_2780 GMP reductase K00364 guaC; GMP reductase [EC:1.7.1.7]
D RD2015_3961 Guanine deaminase K01487 guaD; guanine deaminase [EC:3.5.4.3]
D RD2015_3713 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D RD2015_4309 ribonucleotide reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D RD2015_4158 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D RD2015_4157 Ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D RD2015_975 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D RD2015_3715 guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D RD2015_1640 exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D RD2015_3388 GTP pyrophosphokinase K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5]
D RD2015_712 guanylate cyclase K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D RD2015_1576 Family 3 adenylate cyclase K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D RD2015_1500 Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D RD2015_2773 2`,3`-cyclic-nucleotide 2`-phosphodiesterase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D RD2015_3314 hypothetical protein K00939 adk; adenylate kinase [EC:2.7.4.3]
D RD2015_1596 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41]
D RD2015_3912 sulfate adenylyltransferase K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D RD2015_3911 sulfate adenylyltransferase K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D RD2015_1323 5-hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
D RD2015_2696 Hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
D RD2015_1321 Putative urate catabolism protein K16842 hpxB; allantoinase [EC:3.5.2.5]
D RD2015_3769 Urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D RD2015_3770 Urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5]
D RD2015_3772 Urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5]
C 00240 Pyrimidine metabolism [PATH:rdp00240]
D RD2015_2130 Carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D RD2015_2129 Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D RD2015_4117 Aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D RD2015_4116 Dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D RD2015_1205 Dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D RD2015_1923 dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D RD2015_4717 Orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D RD2015_4611 Orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D RD2015_1508 Uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D RD2015_1485 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D RD2015_3465 Maf-like protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D RD2015_3493 Putative metal-dependent hydrolase K07043 upp; UTP pyrophosphatase [EC:3.6.1.-]
D RD2015_2834 CTP synthetase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D RD2015_941 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D RD2015_2840 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D RD2015_2122 5'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D RD2015_3500 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D RD2015_4118 uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D RD2015_2773 2`,3`-cyclic-nucleotide 2`-phosphodiesterase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D RD2015_512 Pseudouridine-5'-phosphate glycosidase K16329 psuG; pseudouridylate synthase [EC:4.2.1.70]
D RD2015_1898 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D RD2015_4309 ribonucleotide reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D RD2015_4158 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D RD2015_4157 Ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D RD2015_3740 Deoxycytidylate deaminase-like protein K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D RD2015_3155 Thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D RD2015_1904 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D RD2015_1901 Thymidine phosphorylase K00758 deoA; thymidine phosphorylase [EC:2.4.2.4]
D RD2015_588 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D RD2015_2401 Thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D RD2015_1320 allantoate amidohydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:rdp00250]
D RD2015_685 aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RD2015_3424 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D RD2015_2308 Asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D RD2015_3581 Isoaspartyl peptidase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D RD2015_1819 Asparagine synthetase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D RD2015_2943 Asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D RD2015_3032 Aminotransferase AlaT K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D RD2015_162 Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D RD2015_3725 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D RD2015_1500 Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D RD2015_4605 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D RD2015_4117 Aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D RD2015_2548 aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D RD2015_1692 Succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D RD2015_977 glutamate synthase K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D RD2015_978 Glutamate synthase (NADH) small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D RD2015_4834 glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D RD2015_133 integrase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D RD2015_2130 Carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D RD2015_2129 Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D RD2015_675 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D RD2015_532 iron dicitrate transport regulator FecR K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D RD2015_2304 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:rdp00260]
D RD2015_3244 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RD2015_2294 hypothetical protein K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D RD2015_3031 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D RD2015_1671 serine kinase K02204 thrB2; homoserine kinase type II [EC:2.7.1.39]
D RD2015_3030 Threonine synthase ThrC K01733 thrC; threonine synthase [EC:4.2.3.1]
D RD2015_525 threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D RD2015_2369 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RD2015_3892 Lactate dehydrogenase-like oxidoreductase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D RD2015_3967 hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D RD2015_4113 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D RD2015_4466 phosphoglycerate mutase K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D RD2015_1800 3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D RD2015_1863 Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D RD2015_3401 Phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D RD2015_2984 2-amino-3-ketobutyrate CoA ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D RD2015_2966 glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D RD2015_2964 Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D RD2015_1337 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RD2015_1475 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RD2015_2965 Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D RD2015_344 CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D RD2015_1442 CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D RD2015_67 Cystathionine beta-synthase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D RD2015_66 Cystathionine gamma-lyase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D RD2015_2967 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D RD2015_955 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D RD2015_4289 serine dehydratase K17989 SDS; L-serine/L-threonine ammonia-lyase [EC:4.3.1.17 4.3.1.19]
D RD2015_2299 Tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D RD2015_2298 Tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:rdp00270]
D RD2015_2453 Serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D RD2015_3877 Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D RD2015_2827 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D RD2015_2894 Cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D RD2015_1209 Cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D RD2015_66 Cystathionine gamma-lyase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D RD2015_3363 Cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D RD2015_67 Cystathionine beta-synthase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D RD2015_365 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D RD2015_367 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D RD2015_666 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D RD2015_4378 hypothetical protein K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D RD2015_3023 Polyamine aminopropyl transferase K00797 speE; spermidine synthase [EC:2.5.1.16]
D RD2015_1343 Laccase domain protein YfiH K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D RD2015_2749 Protein ssnA, putative K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]
D RD2015_2004 aspartate aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D RD2015_262 aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D RD2015_2772 Guanylate cyclase K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D RD2015_1564 histidine kinase K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D RD2015_658 Adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D RD2015_3244 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RD2015_2294 hypothetical protein K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D RD2015_3031 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D RD2015_4593 homoserine acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D RD2015_2893 homoserine acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D RD2015_3489 Putative homocysteine synthase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D RD2015_2981 O-acetylhomoserine aminocarboxypropyltransferase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D RD2015_2305 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
D RD2015_245 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RD2015_395 Glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D RD2015_872 Glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D RD2015_401 glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D RD2015_685 aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RD2015_1644 Rhodanese domain protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D RD2015_2760 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D RD2015_2967 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D RD2015_4289 serine dehydratase K17989 SDS; L-serine/L-threonine ammonia-lyase [EC:4.3.1.17 4.3.1.19]
D RD2015_2792 Cysteine synthase K12339 cysM; S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) [EC:2.5.1.144]
D RD2015_1800 3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D RD2015_1863 Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:rdp00280]
D RD2015_245 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RD2015_2797 Glu/Leu/Phe/Val dehydrogenase, C terminal:Glu/Leu/Phe/Val dehydrogenase, dimerization region K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9]
D RD2015_1337 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RD2015_1475 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RD2015_831 butyryl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D RD2015_4838 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D RD2015_826 isovaleryl-CoA dehydrogenase K00253 IVD; isovaleryl-CoA dehydrogenase [EC:1.3.8.4]
D RD2015_4068 hypothetical protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RD2015_1193 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D RD2015_2282 Acetyl-CoA carboxylase K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3]
D RD2015_2281 Carboxyl transferase K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D RD2015_2173 acetyl-CoA carboxylase K11263 bccA; acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14]
D RD2015_2279 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D RD2015_921 Putative 2-hydroxy-3-oxopropionate reductase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D RD2015_209 Methylmalonic acid semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D RD2015_4284 malonyl-CoA synthase K18661 matB; malonyl-CoA/methylmalonyl-CoA synthetase [EC:6.2.1.76 6.2.1.-]
D RD2015_2860 omega amino acid--pyruvate aminotransferase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D RD2015_4339 3-methylcrotonoyl-CoA carboxylase subunit alpha K01968 MCCC1; 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4]
D RD2015_4347 Propionyl-CoA carboxylase K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4]
D RD2015_4473 enoyl-CoA hydratase K13766 liuC; methylglutaconyl-CoA hydratase [EC:4.2.1.18]
D RD2015_4344 Enoyl-CoA hydratase K13766 liuC; methylglutaconyl-CoA hydratase [EC:4.2.1.18]
D RD2015_4338 Hydroxymethylglutaryl-CoA lyase YngG K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D RD2015_1938 succinyl-CoA:3-ketoacid-CoA transferase K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D RD2015_1939 putative succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D RD2015_1346 Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RD2015_1393 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RD2015_829 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:rdp00290]
D RD2015_955 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D RD2015_4289 serine dehydratase K17989 SDS; L-serine/L-threonine ammonia-lyase [EC:4.3.1.17 4.3.1.19]
D RD2015_2291 isopropylmalate isomerase K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D RD2015_2292 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D RD2015_2293 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D RD2015_3404 Thiamine pyrophosphate-dependent enzyme, possible carboligase or decarboxylase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RD2015_1439 acetolactate synthase 3 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RD2015_1440 acetolactate synthase K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D RD2015_1441 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D RD2015_3580 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D RD2015_245 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RD2015_2797 Glu/Leu/Phe/Val dehydrogenase, C terminal:Glu/Leu/Phe/Val dehydrogenase, dimerization region K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9]
D RD2015_3032 Aminotransferase AlaT K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D RD2015_1443 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D RD2015_1444 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:rdp00300]
D RD2015_3031 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D RD2015_3244 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RD2015_2294 hypothetical protein K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D RD2015_1910 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D RD2015_4567 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D RD2015_2315 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D RD2015_3638 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D RD2015_2316 succinyldiaminopimelate aminotransferase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
D RD2015_2313 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D RD2015_1319 peptidase M20 K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D RD2015_668 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D RD2015_2930 Orn/DAP/Arg decarboxylase 2 K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D RD2015_1652 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D RD2015_409 Transcriptional regulator with HTH domain and aminotransferase domain K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D RD2015_1221 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D RD2015_1222 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:rdp00310]
D RD2015_4481 Putative aldehyde dehydrogenase K26061 amaB; L-aminoadipate-semialdehyde dehydrogenase
D RD2015_1474 dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D RD2015_1337 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RD2015_1475 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RD2015_3676 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D RD2015_4068 hypothetical protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RD2015_1346 Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RD2015_1393 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RD2015_829 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RD2015_2548 aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D RD2015_1692 Succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D RD2015_4439 CoA-transferase K01041 gcdG; glutaryl-CoA transferase [EC:2.8.3.-]
D RD2015_4451 Branched subunit Amino acid: 2-keto-4-methylthiobutyrate aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D RD2015_1338 Ornithine cyclodeaminase K19743 lhpI; 1-piperideine-2-carboxylate/1-pyrroline-2-carboxylate reductase [NAD(P)H] [EC:1.5.1.1]
C 00220 Arginine biosynthesis [PATH:rdp00220]
D RD2015_3639 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D RD2015_162 Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D RD2015_3725 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D RD2015_2895 Arginase K01476 rocF; arginase [EC:3.5.3.1]
D RD2015_3803 Arginase K01476 rocF; arginase [EC:3.5.3.1]
D RD2015_3769 Urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D RD2015_3770 Urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5]
D RD2015_3772 Urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5]
D RD2015_2130 Carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D RD2015_2129 Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D RD2015_4834 glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D RD2015_685 aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RD2015_3032 Aminotransferase AlaT K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D RD2015_1581 Amino-acid acetyltransferase K14682 argAB; amino-acid N-acetyltransferase [EC:2.3.1.1]
D RD2015_1308 Arginine biosynthesis bifunctional protein ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D RD2015_1277 acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D RD2015_109 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D RD2015_3638 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:rdp00330]
D RD2015_2914 Lysine decarboxylase K01584 adiA; arginine decarboxylase [EC:4.1.1.19]
D RD2015_3023 Polyamine aminopropyl transferase K00797 speE; spermidine synthase [EC:2.5.1.16]
D RD2015_4378 hypothetical protein K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D RD2015_1917 Acetyltransferase, ribosomal protein N-acetylase K00657 speG; diamine N-acetyltransferase [EC:2.3.1.57]
D RD2015_1560 arginine N-succinyltransferase K00673 astA; arginine N-succinyltransferase [EC:2.3.1.109]
D RD2015_1561 hypothetical protein K00673 astA; arginine N-succinyltransferase [EC:2.3.1.109]
D RD2015_2895 Arginase K01476 rocF; arginase [EC:3.5.3.1]
D RD2015_3803 Arginase K01476 rocF; arginase [EC:3.5.3.1]
D RD2015_134 Pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D RD2015_133 integrase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D RD2015_3905 Ornithine cyclodeaminase K01750 E4.3.1.12; ornithine cyclodeaminase [EC:4.3.1.12]
D RD2015_1059 gamma-glutamyl kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D RD2015_4544 Gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D RD2015_2107 proline dioxygenase K00472 P4HA; prolyl 4-hydroxylase [EC:1.14.11.2]
D RD2015_685 aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RD2015_4451 Branched subunit Amino acid: 2-keto-4-methylthiobutyrate aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D RD2015_1338 Ornithine cyclodeaminase K19743 lhpI; 1-piperideine-2-carboxylate/1-pyrroline-2-carboxylate reductase [NAD(P)H] [EC:1.5.1.1]
C 00340 Histidine metabolism [PATH:rdp00340]
D RD2015_891 ATP phosphoribosyltransferase catalytic subunit K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D RD2015_1499 ATP phosphoribosyltransferase regulatory subunit K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit
D RD2015_1284 Phosphoribosyl-ATP pyrophosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]
D RD2015_1283 Phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D RD2015_4185 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D RD2015_4186 Imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D RD2015_4184 Imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D RD2015_4187 Imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D RD2015_1085 hypothetical protein K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RD2015_4188 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RD2015_892 histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D RD2015_3817 Histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D RD2015_3816 urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49]
D RD2015_3813 imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7]
D RD2015_3811 Putative Formiminoglutamate deiminase hutF K05603 hutF; formimidoylglutamate deiminase [EC:3.5.3.13]
D RD2015_3812 N-formylglutamate amidohydrolase K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68]
D RD2015_1601 Methyltransferase K18911 egtD; L-histidine Nalpha-methyltransferase [EC:2.1.1.44]
C 00350 Tyrosine metabolism [PATH:rdp00350]
D RD2015_685 aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RD2015_1085 hypothetical protein K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RD2015_4188 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RD2015_2004 aspartate aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D RD2015_262 aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D RD2015_4430 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D RD2015_1543 Homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D RD2015_1544 Fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
D RD2015_363 Fumarylacetoacetate (FAA) hydrolase K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2]
D RD2015_2451 S-(Hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D RD2015_3384 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D RD2015_2548 aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D RD2015_1692 Succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D RD2015_214 fumarylacetoacetase K16165 nagK; fumarylpyruvate hydrolase [EC:3.7.1.20]
D RD2015_852 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase K16165 nagK; fumarylpyruvate hydrolase [EC:3.7.1.20]
C 00360 Phenylalanine metabolism [PATH:rdp00360]
D RD2015_3433 Phenylacetate-coenzyme A ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30]
D RD2015_3434 phenylacetic acid degradation protein K02614 paaI; acyl-CoA thioesterase [EC:3.1.2.-]
D RD2015_3432 phenylacetate-CoA oxygenase K02609 paaA; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA [EC:1.14.13.149]
D RD2015_3431 phenylacetate-CoA oxygenase subunit PaaB K02610 paaB; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB
D RD2015_3430 Phenylacetate-CoA oxygenase, PaaI subunit K02611 paaC; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaC [EC:1.14.13.149]
D RD2015_3429 Phenylacetate-CoA oxygenase, PaaJ subunit K02612 paaD; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD
D RD2015_3428 phenylacetic acid degradation protein K02613 paaE; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE
D RD2015_3435 enoyl-CoA hydratase K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18]
D RD2015_3425 Phenylacetic acid degradation protein paaN K02618 paaZ; oxepin-CoA hydrolase / 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase [EC:3.3.2.12 1.2.1.91]
D RD2015_4068 hypothetical protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RD2015_4472 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D RD2015_685 aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RD2015_1085 hypothetical protein K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RD2015_4188 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RD2015_2004 aspartate aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D RD2015_262 aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D RD2015_1688 Putative N-acetyltransferase K03825 aaaT; L-phenylalanine/L-methionine N-acetyltransferase [EC:2.3.1.53 2.3.1.-]
D RD2015_4430 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D RD2015_205 D-amino acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D RD2015_263 amino acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D RD2015_1505 D-amino-acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D RD2015_4451 Branched subunit Amino acid: 2-keto-4-methylthiobutyrate aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D RD2015_4205 hydroperoxidase K03782 katG; catalase-peroxidase [EC:1.11.1.21]
D RD2015_1541 FAD-dependent oxidoreductase K05712 mhpA; 3-(3-hydroxy-phenyl)propionate hydroxylase [EC:1.14.13.127]
C 00380 Tryptophan metabolism [PATH:rdp00380]
D RD2015_3679 tryptophan 2,3-dioxygenase K00453 TDO2; tryptophan 2,3-dioxygenase [EC:1.13.11.11]
D RD2015_3677 Kynurenine formamidase K07130 kynB; arylformamidase [EC:3.5.1.9]
D RD2015_3678 kynureninase K01556 KYNU; kynureninase [EC:3.7.1.3]
D RD2015_1474 dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D RD2015_1337 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RD2015_1475 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RD2015_3676 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D RD2015_4068 hypothetical protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RD2015_1346 Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RD2015_1393 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RD2015_829 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RD2015_2074 catalase K03781 katE; catalase [EC:1.11.1.6]
D RD2015_153 Catalase K03781 katE; catalase [EC:1.11.1.6]
D RD2015_4205 hydroperoxidase K03782 katG; catalase-peroxidase [EC:1.11.1.21]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:rdp00400]
D RD2015_927 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D RD2015_1924 Phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D RD2015_974 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D RD2015_4151 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D RD2015_4147 Shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D RD2015_973 Shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D RD2015_1860 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D RD2015_2979 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D RD2015_523 anthranilate synthase subunit I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D RD2015_524 Glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D RD2015_526 anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D RD2015_2297 N-(5'-phosphoribosyl)anthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D RD2015_527 indole-3-glycerol-phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D RD2015_2299 Tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D RD2015_2298 Tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D RD2015_1862 Chorismate mutase, clade 2 K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D RD2015_1861 Prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D RD2015_685 aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RD2015_1085 hypothetical protein K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RD2015_4188 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RD2015_2004 aspartate aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D RD2015_262 aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:rdp00410]
D RD2015_156 pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D RD2015_1320 allantoate amidohydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D RD2015_2860 omega amino acid--pyruvate aminotransferase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D RD2015_4068 hypothetical protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RD2015_831 butyryl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D RD2015_209 Methylmalonic acid semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
C 00430 Taurine and hypotaurine metabolism [PATH:rdp00430]
D RD2015_2553 gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RD2015_3982 Gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RD2015_150 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D RD2015_149 Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
D RD2015_687 PEP mutase K01841 pepM; phosphoenolpyruvate phosphomutase [EC:5.4.2.9]
C 00450 Selenocompound metabolism [PATH:rdp00450]
D RD2015_3363 Cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D RD2015_365 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D RD2015_367 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D RD2015_66 Cystathionine gamma-lyase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D RD2015_870 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D RD2015_1984 Thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D RD2015_3915 ferredoxin-NADP reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D RD2015_3912 sulfate adenylyltransferase K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D RD2015_3911 sulfate adenylyltransferase K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D RD2015_584 segregation protein A K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D RD2015_3452 L-seryl-tRNA(Sec) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D RD2015_1795 Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:rdp00460]
D RD2015_4475 Beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D RD2015_2813 Beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D RD2015_2553 gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RD2015_3982 Gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RD2015_2308 Asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D RD2015_3581 Isoaspartyl peptidase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D RD2015_2369 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:rdp00470]
D RD2015_253 Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D RD2015_4451 Branched subunit Amino acid: 2-keto-4-methylthiobutyrate aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D RD2015_1228 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RD2015_1461 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D RD2015_1224 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D RD2015_668 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D RD2015_2930 Orn/DAP/Arg decarboxylase 2 K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D RD2015_1652 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D RD2015_597 Hydroxyproline-2-epimerase K12658 lhpA; 4-hydroxyproline epimerase [EC:5.1.1.8]
D RD2015_205 D-amino acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D RD2015_263 amino acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D RD2015_1505 D-amino-acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
C 00480 Glutathione metabolism [PATH:rdp00480]
D RD2015_2553 gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RD2015_3982 Gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RD2015_2380 Cation transport protein K07232 CHAC; glutathione-specific gamma-glutamylcyclotransferase [EC:4.3.2.7]
D RD2015_2171 hypothetical protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D RD2015_4526 Putative glutamate--cysteine ligase 2 K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-]
D RD2015_395 Glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D RD2015_872 Glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D RD2015_401 glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D RD2015_2261 putative cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D RD2015_4816 cytochrome C oxidase subunit II K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D RD2015_1613 aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D RD2015_645 Putative GSH-dependent dehydroascorbate reductase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RD2015_4201 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RD2015_412 Glutathione S-transferase domain protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RD2015_441 Glutathione S-transferase domain-containing protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RD2015_4751 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RD2015_4601 Glutathione S transferase domain containing protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RD2015_302 Glutathione S-transferase-like protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RD2015_122 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RD2015_653 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RD2015_3296 Isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D RD2015_992 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D RD2015_4560 Glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D RD2015_258 Glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D RD2015_564 Putative peroxiredoxin K24138 prx3; glutaredoxin/glutathione-dependent peroxiredoxin [EC:1.11.1.25 1.11.1.27]
D RD2015_3023 Polyamine aminopropyl transferase K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
D RD2015_2817 O-glycosyl hydrolase K01201 GBA; glucosylceramidase [EC:3.2.1.45]
C 00540 Lipopolysaccharide biosynthesis [PATH:rdp00540]
D RD2015_1518 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D RD2015_1233 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D RD2015_1516 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D RD2015_3252 UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D RD2015_1519 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D RD2015_3311 Tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D RD2015_4828 arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D RD2015_3864 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D RD2015_4827 3-deoxy-manno-octulosonate-8-phosphatase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D RD2015_3313 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D RD2015_2940 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D RD2015_2348 Three-deoxy-D-manno-octulosonic-acid transferase domain protein K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D RD2015_667 lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D RD2015_1700 aspartyl beta-hydroxylase K12979 lpxO; beta-hydroxylase [EC:1.14.11.-]
D RD2015_1566 Phosphoethanolamine transferase EptA K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D RD2015_4053 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D RD2015_721 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D RD2015_923 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D RD2015_2041 Phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D RD2015_722 D-alpha,beta-D-heptose 7-phosphate 1-kinase RfaE K21344 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase [EC:2.7.1.167]
D RD2015_2042 Bifunctional protein RfaE, domain I K21344 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase [EC:2.7.1.167]
D RD2015_724 D,D-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D RD2015_4383 histidinol phosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D RD2015_723 ADP-heptose synthase K21345 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase [EC:2.7.7.70]
D RD2015_2043 Sugar metabolism enzyme K21345 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase [EC:2.7.7.70]
D RD2015_4052 hypothetical protein K07031 hddA; D-glycero-alpha-D-manno-heptose-7-phosphate kinase [EC:2.7.1.168]
D RD2015_725 Glycosyl transferase family 9 K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D RD2015_726 Glycosyl transferase family 9 K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D RD2015_4774 Sulfatase K19353 eptC; heptose-I-phosphate ethanolaminephosphotransferase [EC:2.7.8.-]
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:rdp00541]
D RD2015_2789 UTP-glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D RD2015_3856 UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RD2015_4044 NAD-dependent epimerase/dehydratase family protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RD2015_4049 dTDP-glucose 4,6-dehydratase, epimerase domain protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RD2015_1852 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D RD2015_3865 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D RD2015_3866 NAD-dependent epimerase/dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D RD2015_3861 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RD2015_3859 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D RD2015_3862 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D RD2015_4040 Putative dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D RD2015_3860 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D RD2015_4037 Glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D RD2015_4038 CDP-glucose 4,6-dehydratase K01709 rfbG; CDP-glucose 4,6-dehydratase [EC:4.2.1.45]
D RD2015_4039 lipopolysaccharide biosynthesis protein RfbH K12452 ascC; CDP-4-dehydro-6-deoxyglucose reductase, E1 [EC:1.17.1.1]
D RD2015_4036 CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1]
D RD2015_2795 Oxidoreductase FAD/NAD(P)-binding domain protein K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1]
D RD2015_3857 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D RD2015_2347 Phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D RD2015_2936 TDP-4-oxo-6-deoxy-D-glucose transaminase K13010 per; perosamine synthetase [EC:2.6.1.102]
D RD2015_4269 Bifunctional protein GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D RD2015_3863 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D RD2015_3858 UDP-N-acetyl-D-galactosamine dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
D RD2015_4065 Oxidoreductase domain protein K13020 wlbA; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335]
D RD2015_4063 Lipopolysaccharide biosynthesis protein K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
D RD2015_4064 Transferase hexapeptide repeat containing protein K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201]
C 00550 Peptidoglycan biosynthesis [PATH:rdp00550]
D RD2015_4808 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D RD2015_3575 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D RD2015_1227 UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D RD2015_1224 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D RD2015_1221 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D RD2015_1228 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RD2015_1222 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D RD2015_1510 UDP diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D RD2015_2100 UDP pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D RD2015_1223 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D RD2015_1226 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-UDP N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D RD2015_4148 Penicillin-binding protein F K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D RD2015_967 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D RD2015_2778 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D RD2015_4709 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D RD2015_1220 Penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D RD2015_4452 cytochrome C550 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D RD2015_273 hypothetical protein K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
C 00552 Teichoic acid biosynthesis [PATH:rdp00552]
D RD2015_2100 UDP pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D RD2015_3873 Glycosyl transferase, WecB/TagA/CpsF family K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:rdp00543]
D RD2015_2453 Serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D RD2015_3877 Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D RD2015_2827 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D RD2015_939 hypothetical protein K16568 exoZ; exopolysaccharide production protein ExoZ
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:rdp00730]
D RD2015_4362 phosphomethylpyrimidine synthase K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D RD2015_4132 Phosphomethylpyrimidine kinase type-1 K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D RD2015_4366 Phosphomethylpyrimidine kinase / thiamine-phosphate pyrophosphorylase K14153 thiDE; hydroxymethylpyrimidine kinase / phosphomethylpyrimidine kinase / thiamine-phosphate diphosphorylase [EC:2.7.1.49 2.7.4.7 2.5.1.3]
D RD2015_2009 Cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RD2015_660 hypothetical protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RD2015_4363 FAD dependent oxidoreductase K03153 thiO; glycine oxidase [EC:1.4.3.19]
D RD2015_1650 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D RD2015_4365 thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10]
D RD2015_4577 thiamine monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D RD2015_3559 GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D RD2015_4370 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D RD2015_3314 hypothetical protein K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:rdp00740]
D RD2015_4728 GTP cyclohydrolase-2 K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D RD2015_2358 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D RD2015_2359 Riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D RD2015_3952 HAD family hydrolase K20862 yigB; FMN hydrolase / 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.102 3.1.3.104]
D RD2015_3332 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D RD2015_2357 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D RD2015_2944 Riboflavin synthase alpha chain RibE K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D RD2015_3589 Riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D RD2015_2993 Hydrolase, NUDIX family K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D RD2015_1064 Polyprenyl p-hydroxybenzoate/phenylacrylic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00750 Vitamin B6 metabolism [PATH:rdp00750]
D RD2015_2378 Pyridoxine/pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D RD2015_189 Putative oxidoreductase, aryl-alcohol dehydrogenase like protein K05275 E1.1.1.65; pyridoxine 4-dehydrogenase [EC:1.1.1.65]
D RD2015_1863 Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D RD2015_1292 4-hydroxythreonine-4-phosphate dehydrogenase K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D RD2015_4012 Pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D RD2015_3030 Threonine synthase ThrC K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:rdp00760]
D RD2015_3424 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D RD2015_3422 quinolinate synthetase K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D RD2015_215 Nicotinate-nucleotide pyrophosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D RD2015_3902 Nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D RD2015_1899 Purine nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D RD2015_4335 transcriptional regulator K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22]
D RD2015_941 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D RD2015_2840 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D RD2015_2122 5'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D RD2015_3468 nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D RD2015_1432 NAD synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D RD2015_4575 CinA domain-containing protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D RD2015_1106 NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D RD2015_4652 NAD(P) transhydrogenase alpha subunit K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D RD2015_4653 NAD(P) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D RD2015_4651 NAD(P) transhydrogenase subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
D RD2015_2548 aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D RD2015_1692 Succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:rdp00770]
D RD2015_3404 Thiamine pyrophosphate-dependent enzyme, possible carboligase or decarboxylase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RD2015_1439 acetolactate synthase 3 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RD2015_1440 acetolactate synthase K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D RD2015_1441 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D RD2015_3580 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D RD2015_155 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D RD2015_1408 Putative oxidoreductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D RD2015_3804 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D RD2015_156 pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D RD2015_4394 Type III pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D RD2015_1903 phosphopantothenate synthase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D RD2015_4182 phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D RD2015_998 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D RD2015_4011 Holo-[acyl-carrier-protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D RD2015_245 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RD2015_1320 allantoate amidohydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
C 00780 Biotin metabolism [PATH:rdp00780]
D RD2015_4103 Biotin synthesis protein BioC K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197]
D RD2015_863 Conserved hypothetical protein, Thiolase-like K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D RD2015_2652 hypothetical protein K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D RD2015_4021 3-oxoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D RD2015_3602 Short chain dehydrogenase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RD2015_2690 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RD2015_4023 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RD2015_1517 3-hydroxyacyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D RD2015_2913 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D RD2015_4342 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D RD2015_4343 Aminotransferase class-III K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D RD2015_4341 dethiobiotin synthetase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D RD2015_4340 hypothetical protein K01012 bioB; biotin synthase [EC:2.8.1.6]
D RD2015_4534 hypothetical protein K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:rdp00785]
D RD2015_4448 lipoate--protein ligase K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D RD2015_4447 lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D RD2015_1337 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RD2015_1475 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RD2015_1335 pyruvate dehydrogenase K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D RD2015_1336 Acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D RD2015_776 2-oxoglutarate dehydrogenase K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D RD2015_1467 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D RD2015_1473 2-oxoglutarate dehydrogenase E1 K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D RD2015_1474 dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D RD2015_2966 glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D RD2015_2964 Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D RD2015_2965 Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:rdp00790]
D RD2015_4550 GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D RD2015_4370 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D RD2015_464 hypothetical protein K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D RD2015_627 Phosphodiesterase K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D RD2015_1944 alkaline phosphatase K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D RD2015_3821 NUDIX hydrolase K08310 nudB; dihydroneopterin triphosphate diphosphatase [EC:3.6.1.67]
D RD2015_3628 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D RD2015_2136 dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D RD2015_2394 Dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D RD2015_2301 folylpolyglutamate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D RD2015_4728 GTP cyclohydrolase-2 K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D RD2015_2358 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D RD2015_3556 putative p-aminobenzoate-synthase component K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38]
D RD2015_91 6-pyruvoyl tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D RD2015_2270 Putative pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D RD2015_92 7-cyano-7-deazaguanine reductase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D RD2015_4545 7-cyano-7-deazaguanine synthase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D RD2015_2319 7-cyano-7-deazaguanine reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D RD2015_3437 Cyclic pyranopterin monophosphate synthase K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D RD2015_4689 molybdenum cofactor biosynthesis protein MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D RD2015_2715 Molybdopterin biosynthesis MoaE protein K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D RD2015_2825 molybdenum cofactor biosynthesis protein MogA K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D RD2015_3029 Molybdenum cofactor synthesis domain protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D RD2015_2379 Bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76]
D RD2015_3438 Molybdenum cofactor guanylyltransferase K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:rdp00670]
D RD2015_2394 Dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D RD2015_1332 Bifunctional protein FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D RD2015_2369 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RD2015_3192 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D RD2015_1244 Bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D RD2015_4761 formyl transferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D RD2015_607 Methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D RD2015_2964 Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D RD2015_365 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D RD2015_367 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D RD2015_2401 Thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D RD2015_1676 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D RD2015_656 Methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D RD2015_647 hypothetical protein K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
D RD2015_651 5,10-methenyltetrahydrofolate synthetase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:rdp00860]
D RD2015_2306 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RD2015_1029 glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D RD2015_1069 glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D RD2015_2440 glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D RD2015_4133 glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D RD2015_4140 glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D RD2015_4457 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D RD2015_3721 Porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D RD2015_3720 Uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D RD2015_432 uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D RD2015_3469 Oxygen-dependent coproporphyrinogen-III oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D RD2015_3298 coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D RD2015_4456 membrane protein K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-]
D RD2015_1575 Ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D RD2015_3719 uroporphyrin-III methyltransferase K02496 hemX; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D RD2015_729 Uroporphyrin-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D RD2015_3913 uroporphyrin-III methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D RD2015_4399 Uroporphyrin-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D RD2015_4092 Protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D RD2015_4093 Cytochrome oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D RD2015_738 cobalamin biosynthesis protein CbiX K03795 cbiX; sirohydrochlorin cobaltochelatase [EC:4.99.1.3]
D RD2015_2258 cobalamin biosynthesis protein CbiX K03795 cbiX; sirohydrochlorin cobaltochelatase [EC:4.99.1.3]
D RD2015_734 Precorrin-2 C20-methyltransferase CbiL K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151]
D RD2015_731 Precorrin-3B C17-methyltransferase CbiH K05934 cobJ; precorrin-3B C17-methyltransferase / cobalt-factor III methyltransferase [EC:2.1.1.131 2.1.1.272]
D RD2015_739 cobalt-precorrin-4 C(11)-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271]
D RD2015_732 cobalamin biosynthesis protein CbiG K02189 cbiG; cobalt-precorrin 5A hydrolase [EC:3.7.1.12]
D RD2015_733 cobalamin biosynthesis protein CbiG K02189 cbiG; cobalt-precorrin 5A hydrolase [EC:3.7.1.12]
D RD2015_736 cobalt-precorrin-6A synthase K02188 cbiD; cobalt-precorrin-5B (C1)-methyltransferase [EC:2.1.1.195]
D RD2015_735 Precorrin-6Y C(5,15)-methyltransferase K00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase / cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196]
D RD2015_737 precorrin-8X methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60]
D RD2015_1088 Cobyrinic acid a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D RD2015_101 ATP--cobalamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D RD2015_1087 Cob(I)alamin adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D RD2015_1084 Cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D RD2015_3618 cobalamin biosynthesis protein CbiB K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D RD2015_1086 cobalamin biosynthesis protein CobD K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D RD2015_1092 Cobalbumin biosynthesis enzyme K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D RD2015_4179 Adenosylcobinamide-GDP ribazoletransferase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D RD2015_1083 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D RD2015_4180 fructose-2,6-bisphosphatase K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73]
D RD2015_1012 Hydrogenobyrinic acid a,c-diamide cobaltochelatase K03403 chlH; magnesium chelatase subunit H [EC:6.6.1.1]
D RD2015_1025 Protoporphyrin IX magnesium-chelatase K03404 chlD; magnesium chelatase subunit D [EC:6.6.1.1]
D RD2015_1024 magnesium chelatase K03405 chlI; magnesium chelatase subunit I [EC:6.6.1.1]
D RD2015_1010 Magnesium protoporphyrin O-methyltransferase K03428 bchM; magnesium-protoporphyrin O-methyltransferase [EC:2.1.1.11]
D RD2015_1005 Aerobic magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase K04035 E1.14.13.81; magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase [EC:1.14.13.81]
D RD2015_1031 Putative nucleoside-diphosphate sugar epimerase K19073 DVR; divinyl chlorophyllide a 8-vinyl-reductase [EC:1.3.1.75]
D RD2015_1011 Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein K04037 chlL; light-independent protochlorophyllide reductase subunit L [EC:1.3.7.7]
D RD2015_1014 Light-independent protochlorophyllide reductase subunit N K04038 chlN; light-independent protochlorophyllide reductase subunit N [EC:1.3.7.7]
D RD2015_1013 Light-independent protochlorophyllide reductase subunit B K04039 chlB; light-independent protochlorophyllide reductase subunit B [EC:1.3.7.7]
D RD2015_1018 BchG K04040 chlG; chlorophyll/bacteriochlorophyll a synthase [EC:2.5.1.62 2.5.1.133]
D RD2015_1037 chitin-binding protein K11333 bchX; 3,8-divinyl chlorophyllide a/chlorophyllide a reductase subunit X [EC:1.3.7.14 1.3.7.15]
D RD2015_1038 Bacteriochlorophyllide reductase subunit Y BchY K11334 bchY; 3,8-divinyl chlorophyllide a/chlorophyllide a reductase subunit Y [EC:1.3.7.14 1.3.7.15]
D RD2015_1039 Chlorophyllide reductase subunit Z K11335 bchZ; 3,8-divinyl chlorophyllide a/chlorophyllide a reductase subunit Z [EC:1.3.7.14 1.3.7.15]
D RD2015_1015 2-vinyl bacteriochlorophyllide hydratase K11336 bchF; 3-vinyl bacteriochlorophyllide hydratase [EC:4.2.1.165]
D RD2015_1036 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase, putative K11337 bchC; bacteriochlorophyllide a dehydrogenase [EC:1.1.1.396]
D RD2015_1020 Geranylgeranyl reductase K10960 chlP; geranylgeranyl diphosphate/geranylgeranyl-bacteriochlorophyllide a reductase [EC:1.3.1.83 1.3.1.111]
D RD2015_2411 bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1]
D RD2015_3985 Bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:rdp00130]
D RD2015_135 putative chorismate pyruvate-lyase K03181 ubiC; chorismate lyase [EC:4.1.3.40]
D RD2015_138 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D RD2015_2371 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98]
D RD2015_1064 Polyprenyl p-hydroxybenzoate/phenylacrylic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D RD2015_1867 Ubiquinone biosynthesis O-methyltransferase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
D RD2015_4523 2-octaprenyl-6-methoxyphenyl hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
D RD2015_3887 ubiquinone/menaquinone biosynthesis methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D RD2015_957 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase K06134 COQ7; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60]
D RD2015_2926 ubiquinone biosynthesis protein UbiB K06134 COQ7; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60]
D RD2015_2512 NAD(P)H dehydrogenase (Quinone) K00355 NQO1; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D RD2015_3408 NADPH-dependent FMN reductase K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D RD2015_4430 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:rdp00900]
D RD2015_1650 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D RD2015_1512 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D RD2015_3396 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D RD2015_1098 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D RD2015_3394 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D RD2015_1489 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D RD2015_3692 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D RD2015_1346 Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RD2015_1393 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RD2015_829 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RD2015_1064 Polyprenyl p-hydroxybenzoate/phenylacrylic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D RD2015_1649 Geranylgeranyl pyrophosphate synthase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D RD2015_1034 Geranyltranstransferase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D RD2015_1055 octaprenyl diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D RD2015_1510 UDP diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D RD2015_1020 Geranylgeranyl reductase K10960 chlP; geranylgeranyl diphosphate/geranylgeranyl-bacteriochlorophyllide a reductase [EC:1.3.1.83 1.3.1.111]
D RD2015_3558 Zn-dependent protease with chaperone function K06013 STE24; STE24 endopeptidase [EC:3.4.24.84]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis [PATH:rdp00906]
D RD2015_1449 phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D RD2015_1028 Phytoene/squalene synthetase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D RD2015_1027 Phytoene desaturase CrtI K10027 crtI; phytoene desaturase [EC:1.3.99.26 1.3.99.28 1.3.99.29 1.3.99.31]
D RD2015_1032 hydroxyneurosporene synthase K09844 crtC; carotenoid 1,2-hydratase [EC:4.2.1.131]
D RD2015_1033 CrtD protein K09845 crtD; 1-hydroxycarotenoid 3,4-desaturase [EC:1.3.99.27]
D RD2015_1035 Hydroxyneurosporene-O-methyltransferase K09846 crtF; demethylspheroidene O-methyltransferase [EC:2.1.1.210]
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation [PATH:rdp00907]
D RD2015_4068 hypothetical protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RD2015_4338 Hydroxymethylglutaryl-CoA lyase YngG K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D RD2015_1193 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D RD2015_4530 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:rdp00523]
D RD2015_3861 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RD2015_3859 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D RD2015_3862 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D RD2015_4040 Putative dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D RD2015_3860 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
D RD2015_3859 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:rdp00946]
D RD2015_4475 Beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D RD2015_2813 Beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
D RD2015_3901 Penicillin amidase K01434 pac; penicillin G amidase [EC:3.5.1.11]
D RD2015_301 Peptidase S45 family protein K01434 pac; penicillin G amidase [EC:3.5.1.11]
C 00332 Carbapenem biosynthesis [PATH:rdp00332]
D RD2015_1059 gamma-glutamyl kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D RD2015_4544 Gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:rdp00261]
D RD2015_3912 sulfate adenylyltransferase K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D RD2015_3911 sulfate adenylyltransferase K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D RD2015_3244 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RD2015_2294 hypothetical protein K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D RD2015_1910 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D RD2015_4567 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D RD2015_4421 acetyltransferase K19113 ttr; acetyltransferase [EC:2.3.1.-]
D RD2015_4420 Acetyltransferase K19113 ttr; acetyltransferase [EC:2.3.1.-]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:rdp00521]
D RD2015_3675 RpiR family transcriptional regulator K00845 glk; glucokinase [EC:2.7.1.2]
D RD2015_3130 Glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D RD2015_2829 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D RD2015_3861 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RD2015_3859 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D RD2015_3862 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D RD2015_4040 Putative dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D RD2015_3860 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D RD2015_3675 RpiR family transcriptional regulator K00845 glk; glucokinase [EC:2.7.1.2]
D RD2015_3130 Glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:rdp00525]
D RD2015_3861 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RD2015_3859 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:rdp00401]
D RD2015_1861 Prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D RD2015_685 aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RD2015_1085 hypothetical protein K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RD2015_4188 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RD2015_2004 aspartate aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D RD2015_262 aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
C 00404 Staurosporine biosynthesis
D RD2015_4477 tryptophan halogenase K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9]
C 00405 Phenazine biosynthesis [PATH:rdp00405]
D RD2015_403 Monooxygenase FAD-binding protein K20940 phzS; 5-methylphenazine-1-carboxylate 1-monooxygenase [EC:1.14.13.218]
D RD2015_523 anthranilate synthase subunit I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D RD2015_524 Glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D RD2015_3339 Acyl transferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D RD2015_4024 ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D RD2015_3602 Short chain dehydrogenase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RD2015_2690 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RD2015_4023 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RD2015_2913 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics [PATH:rdp00998]
D RD2015_803 Phosphopantetheine-binding protein K02078 acpP; acyl carrier protein
D RD2015_4022 Acyl carrier protein K02078 acpP; acyl carrier protein
D RD2015_2932 acyl carrier protein K02078 acpP; acyl carrier protein
D RD2015_687 PEP mutase K01841 pepM; phosphoenolpyruvate phosphomutase [EC:5.4.2.9]
C 00999 Biosynthesis of various plant secondary metabolites [PATH:rdp00999]
D RD2015_666 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D RD2015_4147 Shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D RD2015_4475 Beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D RD2015_2813 Beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:rdp00362]
D RD2015_1193 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D RD2015_4470 Beta-ketoadipyl CoA thiolase K07823 pcaF; 3-oxoadipyl-CoA thiolase [EC:2.3.1.174]
D RD2015_3368 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D RD2015_4206 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D RD2015_407 Fumarylacetoacetase domain-containing protein K01617 dmpH; 2-oxo-3-hexenedioate decarboxylase [EC:4.1.1.77]
D RD2015_1599 3-carboxy-cis,cis-muconate cycloisomerase K01857 pcaB; 3-carboxy-cis,cis-muconate cycloisomerase [EC:5.5.1.2]
D RD2015_2395 4-carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D RD2015_2014 [2Fe-2S] ferredoxin Fdx K04755 fdx; ferredoxin, 2Fe-2S
D RD2015_1392 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D RD2015_1192 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D RD2015_3676 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D RD2015_4068 hypothetical protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RD2015_4472 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D RD2015_1346 Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RD2015_1393 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RD2015_829 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation [PATH:rdp00627]
D RD2015_1064 Polyprenyl p-hydroxybenzoate/phenylacrylic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D RD2015_4068 hypothetical protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
C 00364 Fluorobenzoate degradation [PATH:rdp00364]
D RD2015_498 Dienelactone hydrolase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D RD2015_3139 Carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D RD2015_1641 Dienelactone hydrolase-like enzyme K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00625 Chloroalkane and chloroalkene degradation [PATH:rdp00625]
D RD2015_3384 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D RD2015_2451 S-(Hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D RD2015_41 alpha/beta hydrolase K01561 dehH; haloacetate dehalogenase [EC:3.8.1.3]
D RD2015_758 Haloacid dehalogenase-like hydrolase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:rdp00361]
D RD2015_498 Dienelactone hydrolase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D RD2015_3139 Carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D RD2015_1641 Dienelactone hydrolase-like enzyme K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D RD2015_758 Haloacid dehalogenase-like hydrolase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
D RD2015_41 alpha/beta hydrolase K01561 dehH; haloacetate dehalogenase [EC:3.8.1.3]
C 00623 Toluene degradation [PATH:rdp00623]
D RD2015_498 Dienelactone hydrolase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D RD2015_3139 Carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D RD2015_1641 Dienelactone hydrolase-like enzyme K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00622 Xylene degradation [PATH:rdp00622]
D RD2015_3368 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D RD2015_4206 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D RD2015_407 Fumarylacetoacetase domain-containing protein K01617 dmpH; 2-oxo-3-hexenedioate decarboxylase [EC:4.1.1.77]
C 00633 Nitrotoluene degradation [PATH:rdp00633]
D RD2015_181 GTN reductase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-]
D RD2015_1609 N-ethylmaleimide reductase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-]
C 00642 Ethylbenzene degradation
D RD2015_1193 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation [PATH:rdp00643]
D RD2015_1543 Homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D RD2015_1544 Fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
D RD2015_363 Fumarylacetoacetate (FAA) hydrolase K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2]
C 00791 Atrazine degradation
D RD2015_3769 Urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D RD2015_3770 Urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5]
D RD2015_3772 Urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5]
C 00930 Caprolactam degradation
D RD2015_4068 hypothetical protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation [PATH:rdp00621]
D RD2015_3368 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D RD2015_4206 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D RD2015_407 Fumarylacetoacetase domain-containing protein K01617 dmpH; 2-oxo-3-hexenedioate decarboxylase [EC:4.1.1.77]
C 00626 Naphthalene degradation [PATH:rdp00626]
D RD2015_3384 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D RD2015_2451 S-(Hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
D RD2015_3414 FAD dependent oxidoreductase family protein K03333 choD; cholesterol oxidase [EC:1.1.3.6]
D RD2015_463 hypothetical protein K03333 choD; cholesterol oxidase [EC:1.1.3.6]
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:rdp03020]
D RD2015_545 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D RD2015_546 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D RD2015_581 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D RD2015_3714 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:rdp03010]
D RD2015_1859 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D RD2015_1506 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D RD2015_560 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D RD2015_580 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D RD2015_572 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D RD2015_1525 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D RD2015_550 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D RD2015_569 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D RD2015_933 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D RD2015_553 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D RD2015_579 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D RD2015_549 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D RD2015_578 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D RD2015_568 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D RD2015_3013 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D RD2015_3623 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D RD2015_563 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D RD2015_1527 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D RD2015_558 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D RD2015_3634 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D RD2015_1996 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D RD2015_542 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D RD2015_557 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D RD2015_554 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D RD2015_555 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D RD2015_567 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D RD2015_570 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D RD2015_544 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D RD2015_1528 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D RD2015_543 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D RD2015_541 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D RD2015_932 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D RD2015_565 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D RD2015_574 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D RD2015_561 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D RD2015_582 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D RD2015_571 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D RD2015_3620 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D RD2015_1415 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D RD2015_1056 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D RD2015_559 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D RD2015_556 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D RD2015_566 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D RD2015_1096 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D RD2015_1057 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D RD2015_1983 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D RD2015_562 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D RD2015_573 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D RD2015_2146 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D RD2015_4027 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D RD2015_1982 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D RD2015_4845 hypothetical protein K02914 RP-L34; large subunit ribosomal protein L34
D RD2015_1414 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D RD2015_577 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D RD2015_R027 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RD2015_R068 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RD2015_R071 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RD2015_R024 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RD2015_R025 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RD2015_R030 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RD2015_R065 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RD2015_R070 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RD2015_R031 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D RD2015_R026 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D RD2015_R064 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D RD2015_R069 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:rdp00970]
D RD2015_R038 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RD2015_R041 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RD2015_R029 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RD2015_R049 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RD2015_R066 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RD2015_R037 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RD2015_R058 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RD2015_R059 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RD2015_R060 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RD2015_R001 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RD2015_R061 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D RD2015_R062 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D RD2015_R043 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D RD2015_R040 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D RD2015_R017 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D RD2015_R010 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D RD2015_R042 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D RD2015_R039 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D RD2015_R003 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RD2015_R018 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RD2015_R019 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RD2015_R032 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RD2015_R016 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RD2015_R035 tRNA-His K14226 tRNA-His; tRNA His
D RD2015_R028 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D RD2015_R067 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D RD2015_R015 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RD2015_R020 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RD2015_R021 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RD2015_R048 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RD2015_R044 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RD2015_R072 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RD2015_R054 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D RD2015_R055 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D RD2015_R056 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D RD2015_R006 tRNA-Met K14230 tRNA-Met; tRNA Met
D RD2015_R007 tRNA-Met K14230 tRNA-Met; tRNA Met
D RD2015_R011 tRNA-Met K14230 tRNA-Met; tRNA Met
D RD2015_R063 tRNA-Met K14230 tRNA-Met; tRNA Met
D RD2015_R073 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D RD2015_R014 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D RD2015_R036 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D RD2015_R009 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D RD2015_R022 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RD2015_R045 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RD2015_R050 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RD2015_R057 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RD2015_R013 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RD2015_R023 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RD2015_R004 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RD2015_R005 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D RD2015_R002 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D RD2015_R034 tRNA-Val K14237 tRNA-Val; tRNA Val
D RD2015_R046 tRNA-Val K14237 tRNA-Val; tRNA Val
D RD2015_R053 tRNA-Val K14237 tRNA-Val; tRNA Val
D RD2015_R047 tRNA-Val K14237 tRNA-Val; tRNA Val
D RD2015_2306 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RD2015_4714 glutamyl-tRNA amidotransferase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D RD2015_4715 glutamyl-tRNA amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D RD2015_4713 glutamyl-tRNA amidotransferase K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D RD2015_3477 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D RD2015_1691 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D RD2015_3827 Aspartate--tRNA(Asp/Asn) ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RD2015_4385 Glycine--tRNA ligase alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D RD2015_4384 glycyl-tRNA synthetase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D RD2015_1412 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D RD2015_3691 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D RD2015_3452 L-seryl-tRNA(Sec) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D RD2015_3248 Cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D RD2015_1795 Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D RD2015_4761 formyl transferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D RD2015_607 Methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D RD2015_2787 Valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D RD2015_4570 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RD2015_3590 Isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D RD2015_4066 Lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D RD2015_4637 Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RD2015_1061 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D RD2015_1490 Histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D RD2015_1416 phenylalanyl-tRNA synthetase K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D RD2015_1417 phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D RD2015_937 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RD2015_3193 Tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D RD2015_4805 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:rdp03060]
D RD2015_575 Protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D RD2015_539 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D RD2015_3009 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D RD2015_600 preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D RD2015_601 Protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D RD2015_599 Preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D RD2015_4842 Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RD2015_1305 Protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RD2015_4107 Protein-export protein SecB K03071 secB; preprotein translocase subunit SecB
D RD2015_4163 signal recognition particle protein Srp54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D RD2015_4164 cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D RD2015_1287 preprotein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA
D RD2015_1288 Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D RD2015_1289 Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC
D RD2015_3066 signal peptidase K03100 lepB; signal peptidase I [EC:3.4.21.89]
D RD2015_4017 Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D RD2015_3597 Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:rdp04122]
D RD2015_2009 Cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RD2015_660 hypothetical protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RD2015_1644 Rhodanese domain protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D RD2015_2790 SirA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D RD2015_4657 thiouridylase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D RD2015_2715 Molybdopterin biosynthesis MoaE protein K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D RD2015_3437 Cyclic pyranopterin monophosphate synthase K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D RD2015_3028 Molybdopterin converting factor, small subunit K03636 moaD; sulfur-carrier protein
D RD2015_1662 thiamine biosynthesis protein ThiS K03636 moaD; sulfur-carrier protein
D RD2015_3801 molybdopterin biosynthesis protein MoeB K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D RD2015_4689 molybdenum cofactor biosynthesis protein MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D RD2015_2825 molybdenum cofactor biosynthesis protein MogA K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D RD2015_4364 Sulfur transfer protein K03154 thiS; sulfur carrier protein
C 03050 Proteasome
C 03018 RNA degradation [PATH:rdp03018]
D RD2015_1060 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D RD2015_4005 ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D RD2015_2836 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RD2015_3012 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D RD2015_4223 RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D RD2015_4031 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D RD2015_1503 Ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D RD2015_2698 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D RD2015_4670 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D RD2015_2147 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D RD2015_1569 Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D RD2015_4257 molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RD2015_1494 RNA-binding protein Hfq K03666 hfq; host factor-I protein
D RD2015_1639 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D RD2015_4292 Polyphosphate kinase 2, PA0141 family K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D RD2015_428 Putative polyphosphate kinase K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D RD2015_3629 poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:rdp03030]
D RD2015_2194 Exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RD2015_94 DNA polymerase III PolC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RD2015_2955 DNA polymerase III epsilon subunit DnaQ K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RD2015_1846 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RD2015_3748 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RD2015_3154 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RD2015_4572 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RD2015_2262 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D RD2015_3 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RD2015_1529 hypothetical protein K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D RD2015_1578 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D RD2015_4668 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RD2015_3741 Ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D RD2015_1520 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D RD2015_1673 DNA-directed DNA polymerase K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RD2015_2343 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D RD2015_2536 Putative nucleoside-triphosphatase K10742 DNA2; DNA replication ATP-dependent helicase/nuclease Dna2 [EC:5.6.2.3 3.1.-.-]
C 03410 Base excision repair [PATH:rdp03410]
D RD2015_2001 Endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D RD2015_528 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D RD2015_1102 A/G-specific DNA-adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D RD2015_4175 Putative 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D RD2015_1101 Formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D RD2015_3247 DNA-3-methyladenine glycosylase K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D RD2015_2346 Ada K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D RD2015_640 DNA polymerase-like protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D RD2015_4719 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D RD2015_2385 Exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D RD2015_1673 DNA-directed DNA polymerase K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RD2015_1636 single-stranded DNA exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D RD2015_2343 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:rdp03420]
D RD2015_3400 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D RD2015_4280 Excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D RD2015_2456 Excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D RD2015_4675 UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A
D RD2015_2005 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D RD2015_2111 excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D RD2015_3133 ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RD2015_1667 DNA/RNA helicase, superfamily I K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RD2015_1673 DNA-directed DNA polymerase K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RD2015_2343 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:rdp03430]
D RD2015_2832 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D RD2015_3173 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D RD2015_3133 ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RD2015_1667 DNA/RNA helicase, superfamily I K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RD2015_2776 Exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D RD2015_3308 exodeoxyribonuclease VII K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D RD2015_1648 Exodeoxyribonuclease 7 small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D RD2015_1636 single-stranded DNA exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D RD2015_4668 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RD2015_1846 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RD2015_3 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RD2015_3748 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RD2015_4572 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RD2015_3154 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RD2015_2194 Exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RD2015_94 DNA polymerase III PolC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RD2015_2955 DNA polymerase III epsilon subunit DnaQ K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RD2015_2262 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D RD2015_2343 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D RD2015_2207 D12 class N6 adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D RD2015_1880 Upf31.0 K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C 03440 Homologous recombination [PATH:rdp03440]
D RD2015_1636 single-stranded DNA exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D RD2015_4668 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RD2015_4013 DNA recombination protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D RD2015_3746 recombination protein RecR K06187 recR; recombination protein RecR
D RD2015_4705 recombinase A K03553 recA; recombination protein RecA
D RD2015_1673 DNA-directed DNA polymerase K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RD2015_4463 ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D RD2015_4464 Holliday junction ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D RD2015_1241 Holliday junction resolvase K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D RD2015_157 Putative ATP-dependent DNA helicase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D RD2015_1846 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RD2015_3 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RD2015_3748 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RD2015_4572 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RD2015_3154 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RD2015_2194 Exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RD2015_94 DNA polymerase III PolC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RD2015_2955 DNA polymerase III epsilon subunit DnaQ K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RD2015_2262 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D RD2015_433 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D RD2015_1526 Primosomal replication protein N K02686 priB; primosomal replication protein N
C 03450 Non-homologous end-joining [PATH:rdp03450]
D RD2015_2329 DNA-binding protein K10979 ku; DNA end-binding protein Ku
D RD2015_1885 DNA repair protein K10979 ku; DNA end-binding protein Ku
D RD2015_2330 ATP-dependent DNA ligase K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:rdp03250]
D RD2015_3250 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03272 Virion - Hepatitis viruses
D RD2015_4277 hypothetical protein K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D RD2015_3483 hypothetical protein K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:rdp02010]
D RD2015_73 thiosulfate transporter subunit K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D RD2015_80 ABC transporter permease K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D RD2015_74 sulfate/thiosulfate transporter subunit K02046 cysU; sulfate/thiosulfate transport system permease protein
D RD2015_75 Sulfate ABC transporter permease K02047 cysW; sulfate/thiosulfate transport system permease protein
D RD2015_76 sulfate ABC transporter ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D RD2015_4405 nitrate transporter K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D RD2015_4404 Bicarbonate transport system permease protein CmpB K15577 nrtB; nitrate/nitrite transport system permease protein
D RD2015_4403 Nitrate transport ATP-binding subunits C and D K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D RD2015_70 ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component K15553 ssuA; sulfonate transport system substrate-binding protein
D RD2015_68 Binding-protein-dependent transport system inner membrane component family protein 69 K15554 ssuC; sulfonate transport system permease protein
D RD2015_69 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D RD2015_231 Molybdate ABC transporter, periplasmic molybdate-binding protein ModA K02020 modA; molybdate transport system substrate-binding protein
D RD2015_4077 hypothetical protein K02020 modA; molybdate transport system substrate-binding protein
D RD2015_232 Molybdate ABC transporter, permease protein K02018 modB; molybdate transport system permease protein
D RD2015_233 Molybdate ABC transporter, ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D RD2015_622 Spermidine/putrescine ABC transporter, ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D RD2015_352 ABC-type proline/glycine betaine transport system, periplasmic component K02002 proX; glycine betaine/proline transport system substrate-binding protein
D RD2015_2167 Substrate-binding region of ABC-type glycine betaine transport system K02002 proX; glycine betaine/proline transport system substrate-binding protein
D RD2015_2166 Binding-protein-dependent transport systems inner membrane component K02001 proW; glycine betaine/proline transport system permease protein
D RD2015_2165 Glycine betaine/L-proline ABC transporter, ATP-binding protein ProV K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D RD2015_596 amino acid ABC transporter permease K05845 opuC; osmoprotectant transport system substrate-binding protein
D RD2015_3663 Maltose ABC transporter periplasmic protein K10108 malE; maltose/maltodextrin transport system substrate-binding protein
D RD2015_2678 sugar ABC transporter substrate-binding protein K10108 malE; maltose/maltodextrin transport system substrate-binding protein
D RD2015_3664 Maltose ABC transporter, permease protein MalF K10109 malF; maltose/maltodextrin transport system permease protein
D RD2015_2677 hypothetical protein K10109 malF; maltose/maltodextrin transport system permease protein
D RD2015_2676 maltose transporter permease K10110 malG; maltose/maltodextrin transport system permease protein
D RD2015_3665 Maltose transporter permease K10110 malG; maltose/maltodextrin transport system permease protein
D RD2015_1534 ATPase component of ABC-type sugar transporter K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D RD2015_3662 ABC transporter K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D RD2015_2679 ABC transporter-like protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D RD2015_2814 sugar ABC transporter ATP-binding protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D RD2015_3129 ABC transporter K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D RD2015_1531 Extracellular solute-binding protein K10227 smoE; polyol transport system substrate-binding protein
D RD2015_1532 Permease component of ABC-type sugar transporter K10228 smoF; polyol transport system permease protein
D RD2015_1533 ABC-type sugar transport system, permease component K10229 smoG; polyol transport system permease protein
D RD2015_2567 hypothetical protein K10192 togB; oligogalacturonide transport system substrate-binding protein
D RD2015_2570 putative ABC transporter permease protein yesP K10193 togM; oligogalacturonide transport system permease protein
D RD2015_2569 Binding-protein-dependent transport system inner membrane protein K10194 togN; oligogalacturonide transport system permease protein
D RD2015_2568 sn-glycerol-3-phosphate import ATP-binding protein ugpC K10195 togA; oligogalacturonide transport system ATP-binding protein
D RD2015_2810 Extracellular solute-binding protein, family 1 K10240 cebE; cellobiose transport system substrate-binding protein
D RD2015_2811 Binding-protein-dependent transport systems inner membrane component K10241 cebF; cellobiose transport system permease protein
D RD2015_2812 sugar ABC transporter permease K10242 cebG; cellobiose transport system permease protein
D RD2015_2613 Sugar ABC transporter periplasmic sugar-binding protein K10546 chvE; putative multiple sugar transport system substrate-binding protein
D RD2015_2611 ABC transporter permease K10547 gguB; putative multiple sugar transport system permease protein
D RD2015_2612 ABC transporter ATP-binding protein K10548 gguA; putative multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D RD2015_1422 hypothetical protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D RD2015_987 ABC transporter substrate-binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D RD2015_1420 ABC-type transport system permease component USSDB6A K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D RD2015_986 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D RD2015_990 hypothetical protein K07122 mlaB; phospholipid transport system transporter-binding protein
D RD2015_1421 iron ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D RD2015_985 toluene ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D RD2015_1894 membrane protein K07335 bmpA; basic membrane protein A and related proteins
D RD2015_3957 Putative ABC-type transport system, periplasmic component/surface lipoprotein K07335 bmpA; basic membrane protein A and related proteins
D RD2015_1896 D-allose transporter subunit K23535 nupB; general nucleoside transport system permease protein
D RD2015_3959 sugar ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D RD2015_1897 sugar ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D RD2015_3958 Putative ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D RD2015_1895 Ribose import ATP-binding protein RbsA K23537 nupA; general nucleoside transport system ATP-binding protein
D RD2015_3960 ABC transporter K23537 nupA; general nucleoside transport system ATP-binding protein
D RD2015_3126 Putative ABC transporter substrate binding protein K17315 gtsA; glucose/mannose transport system substrate-binding protein
D RD2015_3127 sugar ABC transporter permease K17316 gtsB; glucose/mannose transport system permease protein
D RD2015_3128 Putative ABC transporter permease protein K17317 gtsC; glucose/mannose transport system permease protein
D RD2015_2622 ABC-type sugar transport system, periplasmic component protein K23508 ytfQ; galactofuranose transport system substrate-binding protein
D RD2015_2624 sugar ABC transporter permease K23509 ytfT; galactofuranose transport system permease protein
D RD2015_2625 ABC transporter permease K23509 ytfT; galactofuranose transport system permease protein
D RD2015_2623 Putative ABC transporter K10820 ytfR; galactofuranose transport system ATP-binding protein [EC:7.5.2.9]
D RD2015_3056 ABC-type sugar transport system, periplasmic component K10552 frcB; fructose transport system substrate-binding protein
D RD2015_3055 ABC transporter permease K10553 frcC; fructose transport system permease protein
D RD2015_3054 sugar ABC transporter ATP-binding protein K10554 frcA; fructose transport system ATP-binding protein
D RD2015_322 ABC-type sugar transport system, periplasmic component K17321 glpV; glycerol transport system substrate-binding protein
D RD2015_319 Carbohydrate ABC transporter membrane protein 1, CUT1 family K17322 glpP; glycerol transport system permease protein
D RD2015_320 Carbohydrate ABC transporter membrane protein 2, CUT1 family K17323 glpQ; glycerol transport system permease protein
D RD2015_317 Carbohydrate ABC transporter ATP-binding protein, CUT1 family K17324 glpS; glycerol transport system ATP-binding protein
D RD2015_318 ABC transporter ATP-binding protein K17325 glpT; glycerol transport system ATP-binding protein
D RD2015_3975 glycerol-3-phosphate ABC transporter substrate-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D RD2015_3976 Binding-protein-dependent transport systems inner membrane component K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D RD2015_3977 L-arabinose transport system permease protein AraQ K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D RD2015_3978 sn-glycerol-3-phosphate import ATP-binding protein UgpC K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D RD2015_2138 Phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D RD2015_614 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D RD2015_2139 Phosphate transport system permease protein K02037 pstC; phosphate transport system permease protein
D RD2015_2140 Phosphate ABC transporter, permease protein PstA K02038 pstA; phosphate transport system permease protein
D RD2015_2141 Phosphate import ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D RD2015_3450 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D RD2015_3448 Phosphate-import permease protein PhnE K02042 phnE; phosphonate transport system permease protein
D RD2015_3449 phosphonate ABC transporter K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D RD2015_1201 Periplasmic component of amino acid ABC-type transporter/signal transduction system K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D RD2015_1989 ABC transporter K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D RD2015_1203 amino acid ABC transporter permease K10002 gltK; glutamate/aspartate transport system permease protein
D RD2015_1202 Putative ABC transporter protein glutamate/aspartate transmembrane subunit K10003 gltJ; glutamate/aspartate transport system permease protein
D RD2015_1204 Putative polar amino acid transport system ATP-binding protein K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D RD2015_767 cysteine ABC transporter substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D RD2015_766 Amino acid ABC transporter permease K10009 tcyB; L-cystine transport system permease protein
D RD2015_1842 Putative amino acid binding protein K10022 aotJ; arginine/ornithine transport system substrate-binding protein
D RD2015_1840 Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine K10023 aotM; arginine/ornithine transport system permease protein
D RD2015_1841 Arginine/ornithine transport system permease protein K10024 aotQ; arginine/ornithine transport system permease protein
D RD2015_1838 histidine ABC transporter ATP-binding protein K10025 aotP; arginine/ornithine transport system ATP-binding protein [EC:7.4.2.1]
D RD2015_4521 amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RD2015_3426 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RD2015_2016 ABC-type branched-chain amino acid transport system, periplasmic component K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RD2015_1384 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RD2015_2263 Putative high-affinity branched-chain amino acid ABC transporter substrate binding protein LivK K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RD2015_142 Leucine ABC transporter subunit substrate-binding protein LivK K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RD2015_4520 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D RD2015_1385 Branched-chain amino acid ABC-type transport system, permease component K01997 livH; branched-chain amino acid transport system permease protein
D RD2015_592 Inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D RD2015_141 LIV-I protein H K01997 livH; branched-chain amino acid transport system permease protein
D RD2015_2801 LIV-I protein H K01997 livH; branched-chain amino acid transport system permease protein
D RD2015_4519 ABC transporter K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RD2015_593 ABC transporter-related protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RD2015_140 Leucine/isoleucine/valine transporter permease subunit K01998 livM; branched-chain amino acid transport system permease protein
D RD2015_2800 ABC transporter ATP-binding protein K01998 livM; branched-chain amino acid transport system permease protein
D RD2015_1386 ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D RD2015_1387 branched-chain amino acid ABC transporter substrate-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RD2015_144 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RD2015_2799 Putative high-affinity branched-chain amino acid ABC transporter ATP binding protein LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RD2015_594 ABC transporter-related protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RD2015_4518 amino acid ABC transporter ATPase K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RD2015_143 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RD2015_2798 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RD2015_1388 mannosyltransferase K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RD2015_4506 methionine ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D RD2015_4505 metal ABC transporter permease K02072 metI; D-methionine transport system permease protein
D RD2015_4504 Methionine import ATP-binding protein MetN K02071 metN; D-methionine transport system ATP-binding protein
D RD2015_3777 branched-chain amino acid ABC transporter substrate-binding protein K11959 urtA; urea transport system substrate-binding protein
D RD2015_3778 urea ABC transporter permease K11960 urtB; urea transport system permease protein
D RD2015_3779 amino acid ABC transporter permease K11961 urtC; urea transport system permease protein
D RD2015_3780 ABC transporter-like protein K11962 urtD; urea transport system ATP-binding protein
D RD2015_3781 Urea ABC transporter, ATP-binding protein UrtE K11963 urtE; urea transport system ATP-binding protein
D RD2015_278 Extracellular solute-binding protein family 5 K12368 dppA; dipeptide transport system substrate-binding protein
D RD2015_282 peptide ABC transporter permease K12369 dppB; dipeptide transport system permease protein
D RD2015_281 peptide transporter K12370 dppC; dipeptide transport system permease protein
D RD2015_280 peptide ABC transporter ATP-binding protein K12371 dppD; dipeptide transport system ATP-binding protein
D RD2015_279 peptide ABC transporter ATP-binding protein K12372 dppF; dipeptide transport system ATP-binding protein
D RD2015_742 Cobalt transport protein CbiN K02009 cbiN; cobalt/nickel transport protein
D RD2015_743 cobalamin biosynthesis protein CbiM K02007 cbiM; cobalt/nickel transport system permease protein
D RD2015_741 cobalt transporter K02008 cbiQ; cobalt/nickel transport system permease protein
D RD2015_740 cobalt ABC transporter ATP-binding protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D RD2015_119 sodium ABC transporter permease K09696 natB; sodium transport system permease protein
D RD2015_120 ABC transporter ATP-binding protein K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D RD2015_1674 cell division protein FtsX K09808 lolC_E; lipoprotein-releasing system permease protein
D RD2015_1675 Lipoprotein-releasing system ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D RD2015_2260 permease K07091 lptF; lipopolysaccharide export system permease protein
D RD2015_2259 Putative ABC transporter permease K11720 lptG; lipopolysaccharide export system permease protein
D RD2015_4641 Lipopolysaccharide export system ATP-binding protein LptB K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D RD2015_1851 lipid ABC transporter permease K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D RD2015_1237 ABC transporter ATP-binding protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D RD2015_1236 ABC transporter ATP-binding protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D RD2015_328 ABC transporter, HlyB/MsbA family K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D RD2015_3292 putative ATP-binding cassette sub-family B member 9-like K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D RD2015_1199 ABC transporter permease/ATP-binding protein K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
D RD2015_351 ABC transporter, ATP-binding/permease protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D RD2015_2419 ABC-type bacteriocin/lantibiotic exporter K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D RD2015_1804 Type I secretion system ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D RD2015_1372 ABC transporter K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D RD2015_2737 ABC transporter ATP-binding protein K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein
C 02060 Phosphotransferase system (PTS) [PATH:rdp02060]
D RD2015_4434 phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D RD2015_4436 phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D RD2015_4437 PTS fructose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D RD2015_4563 PTS IIA-like nitrogen-regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
C 03070 Bacterial secretion system [PATH:rdp03070]
D RD2015_3239 type I secretion protein TolC K12340 tolC; outer membrane protein
D RD2015_2104 Outer membrane protein TolC K12340 tolC; outer membrane protein
D RD2015_3116 Type III secretion outer membrane pore, YscC/HrcC family K03219 yscC; type III secretion protein C
D RD2015_3845 Type III secretion protein K03219 yscC; type III secretion protein C
D RD2015_3835 type III secretion protein K03222 yscJ; type III secretion protein J
D RD2015_3107 Type III secretion apparatus lipoprotein, YscJ/HrcJ family K03222 yscJ; type III secretion protein J
D RD2015_3849 Type III secretion apparatus protein K03226 yscR; type III secretion protein R
D RD2015_3098 flagellar biosynthesis protein FliP K03226 yscR; type III secretion protein R
D RD2015_3850 Type III secretion, HrpO family protein K03227 yscS; type III secretion protein S
D RD2015_3099 Type III secretion protein, HrpO family K03227 yscS; type III secretion protein S
D RD2015_3838 hypothetical protein K03228 yscT; type III secretion protein T
D RD2015_3102 Type III secretion protein SpaR/YscT/HrcT K03228 yscT; type III secretion protein T
D RD2015_3839 hypothetical protein K03229 yscU; type III secretion protein U
D RD2015_3094 Type III secretion protein, YscU/HrpY family K03229 yscU; type III secretion protein U
D RD2015_3843 Harpin secretion protein hrpI K03230 yscV; type III secretion protein V
D RD2015_3095 Type III secretion protein, HrcV family K03230 yscV; type III secretion protein V
D RD2015_3841 Type III secretion ATP synthase protein K03224 yscN; ATP synthase in type III secretion protein N [EC:7.4.2.8]
D RD2015_3104 Type III secretion apparatus H+-transporting two-sector ATPase K03224 yscN; ATP synthase in type III secretion protein N [EC:7.4.2.8]
D RD2015_3848 hypothetical protein K03225 yscQ; type III secretion protein Q
D RD2015_3097 hypothetical protein K03225 yscQ; type III secretion protein Q
D RD2015_3105 Type III secretion apparatus protein SctL K03223 yscL; type III secretion protein L
D RD2015_944 General secretion pathway protein D K02453 gspD; general secretion pathway protein D
D RD2015_2392 General secretion pathway protein D K02453 gspD; general secretion pathway protein D
D RD2015_953 hypothetical protein K02452 gspC; general secretion pathway protein C
D RD2015_942 general secretion pathway protein F K02455 gspF; general secretion pathway protein F
D RD2015_952 general secretion pathway protein GspG K02456 gspG; general secretion pathway protein G
D RD2015_951 general secretion pathway protein GspH K02457 gspH; general secretion pathway protein H
D RD2015_950 general secretion pathway protein GspI K02458 gspI; general secretion pathway protein I
D RD2015_949 general secretion pathway protein GspJ K02459 gspJ; general secretion pathway protein J
D RD2015_948 Type II secretion system protein K K02460 gspK; general secretion pathway protein K
D RD2015_947 Putative general secretion pathway protein L GspL K02461 gspL; general secretion pathway protein L
D RD2015_946 general secretion pathway protein GspM K02462 gspM; general secretion pathway protein M
D RD2015_943 general secretion pathway protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D RD2015_1680 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D RD2015_600 preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D RD2015_601 Protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D RD2015_539 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D RD2015_3009 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D RD2015_575 Protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D RD2015_599 Preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D RD2015_4842 Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RD2015_1305 Protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RD2015_4164 cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D RD2015_4107 Protein-export protein SecB K03071 secB; preprotein translocase subunit SecB
D RD2015_4163 signal recognition particle protein Srp54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D RD2015_1287 preprotein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA
D RD2015_1288 Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D RD2015_1289 Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC
D RD2015_866 VgrG protein K11904 vgrG; type VI secretion system secreted protein VgrG
D RD2015_2648 VgrG protein K11904 vgrG; type VI secretion system secreted protein VgrG
D RD2015_3222 VgrG protein K11904 vgrG; type VI secretion system secreted protein VgrG
D RD2015_2663 hypothetical protein K11903 hcp; type VI secretion system secreted protein Hcp
D RD2015_2664 type VI secretion protein K11903 hcp; type VI secretion system secreted protein Hcp
D RD2015_2633 hypothetical protein K11906 vasD; type VI secretion system protein VasD
D RD2015_2636 Type VI secretion protein IcmF K11891 impL; type VI secretion system protein ImpL
D RD2015_2635 Type IV / VI secretion system protein, DotU family K11892 impK; type VI secretion system protein ImpK
D RD2015_2658 ATPase AAA K11907 vasG; type VI secretion system protein VasG
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:rdp02020]
D RD2015_2144 Phosphate regulon sensor protein PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D RD2015_2143 chemotaxis protein CheY K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D RD2015_4370 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D RD2015_464 hypothetical protein K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D RD2015_627 Phosphodiesterase K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D RD2015_1944 alkaline phosphatase K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D RD2015_2138 Phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D RD2015_614 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D RD2015_3393 Osmolarity sensor protein EnvZ K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D RD2015_1588 hypothetical protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D RD2015_3392 Osmolarity response regulator K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D RD2015_1593 transcriptional regulator K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D RD2015_1589 transcriptional regulator K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D RD2015_4608 hypothetical protein K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3]
D RD2015_3197 histidine kinase K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3]
D RD2015_2960 Putative protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D RD2015_4019 Protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D RD2015_1206 trypsin K04771 degP; serine protease Do [EC:3.4.21.107]
D RD2015_469 TPR repeat K04771 degP; serine protease Do [EC:3.4.21.107]
D RD2015_4819 histidine kinase K07641 creC; two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3]
D RD2015_4820 transcriptional regulator K07663 creB; two-component system, OmpR family, catabolic regulation response regulator CreB
D RD2015_4443 HlyD family secretion protein K07799 mdtA; membrane fusion protein, multidrug efflux system
D RD2015_4444 Cation/multidrug efflux pump K07788 mdtB; multidrug efflux pump
D RD2015_4445 AcrB/AcrD/AcrF family membrane protein K07789 mdtC; multidrug efflux pump
D RD2015_2689 Sensor protein CzcS K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D RD2015_2693 histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D RD2015_2694 transcriptional regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D RD2015_2711 transcriptional regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D RD2015_1741 Flagellar transcriptional regulator FlhD K02403 flhD; flagellar transcriptional activator FlhD
D RD2015_1744 Flagellar transcriptional regulator FlhD K02403 flhD; flagellar transcriptional activator FlhD
D RD2015_1742 Flagellar transcriptional regulator FlhC K02402 flhC; flagellar transcriptional activator FlhC
D RD2015_1745 Flagellar transcriptional regulator FlhC K02402 flhC; flagellar transcriptional activator FlhC
D RD2015_1736 Flagellin FliC K02406 fliC; flagellin
D RD2015_1737 Flagellin domain protein K02406 fliC; flagellin
D RD2015_1739 Flagellin domain protein K02406 fliC; flagellin
D RD2015_1836 Flagellin p6-like protein K02406 fliC; flagellin
D RD2015_1755 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
D RD2015_3521 flagellar biosynthesis sigma factor K02405 fliA; RNA polymerase sigma factor FliA
D RD2015_1747 Chemotaxis signal transduction protein CheY K02556 motA; chemotaxis protein MotA
D RD2015_3520 Chemotaxis protein LafT K02556 motA; chemotaxis protein MotA
D RD2015_2725 sensor protein KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D RD2015_2724 transcriptional regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D RD2015_2808 hypothetical protein K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D RD2015_2729 ATPase K01546 kdpA; potassium-transporting ATPase potassium-binding subunit
D RD2015_2728 potassium-transporting ATPase subunit B K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6]
D RD2015_2727 Potassium-transporting ATPase C chain K01548 kdpC; potassium-transporting ATPase KdpC subunit
D RD2015_4829 Sensor protein QseC K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D RD2015_1574 tripartite tricarboxylate transporter TctA K07793 tctA; putative tricarboxylic transport membrane protein
D RD2015_1682 Tripartite tricarboxylate transporter TctA family protein K07793 tctA; putative tricarboxylic transport membrane protein
D RD2015_3765 hypothetical protein K07793 tctA; putative tricarboxylic transport membrane protein
D RD2015_1573 tripartite tricarboxylate transporter TctB K07794 tctB; putative tricarboxylic transport membrane protein
D RD2015_1681 Putative membrane protein K07794 tctB; putative tricarboxylic transport membrane protein
D RD2015_1572 C4-dicarboxylate ABC transporter substrate-binding protein K07795 tctC; putative tricarboxylic transport membrane protein
D RD2015_4093 Cytochrome oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D RD2015_1 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D RD2015_276 D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D RD2015_2761 aldolase K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D RD2015_3724 histidine kinase K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3]
D RD2015_3723 Transcriptional regulator, LytR/AlgR family K08083 algR; two-component system, LytTR family, response regulator AlgR
D RD2015_120 ABC transporter ATP-binding protein K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D RD2015_119 sodium ABC transporter permease K09696 natB; sodium transport system permease protein
D RD2015_2120 response regulator K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D RD2015_4730 LuxR family transcriptional regulator K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D RD2015_4461 histidine kinase K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D RD2015_4123 LuxR family transcriptional regulator K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D RD2015_1710 LuxR family transcriptional regulator K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D RD2015_55 hisitidine kinase K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D RD2015_4195 Spore coat protein U K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D RD2015_4194 Spore coat protein U K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D RD2015_832 Spore coat protein U K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D RD2015_4191 Spore coat protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D RD2015_4193 hypothetical protein K07346 fimC; fimbrial chaperone protein
D RD2015_4192 hypothetical protein K07347 fimD; outer membrane usher protein
D RD2015_2098 protein-PII uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D RD2015_1433 Nitrogen regulatory protein PII K04751 glnB; nitrogen regulatory protein P-II 1
D RD2015_1357 histidine kinase K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D RD2015_1358 chemotaxis protein CheY K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D RD2015_4553 Nitrogen regulation protein NtrY K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D RD2015_4554 XRE family transcriptional regulator K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D RD2015_1346 Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RD2015_1393 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RD2015_829 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RD2015_2802 hypothetical protein K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D RD2015_2803 Fis family transcriptional regulator K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
D RD2015_1197 C4-dicarboxylate transporter K11103 dctA; aerobic C4-dicarboxylate transport protein
D RD2015_4160 Histidine kinase K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D RD2015_4159 Two-component system response regulator PilR K02667 pilR; two-component system, NtrC family, response regulator PilR
D RD2015_2059 RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D RD2015_4642 RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D RD2015_4694 Fimbrial protein ecpC K02650 pilA; type IV pilus assembly protein PilA
D RD2015_4695 methylation K02650 pilA; type IV pilus assembly protein PilA
D RD2015_984 fimbrial assembly protein K02650 pilA; type IV pilus assembly protein PilA
D RD2015_4788 Integral membrane sensor signal transduction histidine kinase K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
D RD2015_4786 Two component, sigma54 specific, transcriptional regulator, Fis family K07715 glrR; two-component system, NtrC family, response regulator GlrR
D RD2015_2483 Chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D RD2015_1187 hypothetical protein K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D RD2015_3701 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D RD2015_2088 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D RD2015_782 histidine kinase K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D RD2015_1929 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RD2015_4240 Methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D RD2015_3495 Chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RD2015_1326 Methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D RD2015_4110 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RD2015_1705 Methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D RD2015_3281 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RD2015_1466 Methyl-accepting chemotaxis transducer transmembrane protein K03406 mcp; methyl-accepting chemotaxis protein
D RD2015_2457 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RD2015_2478 Putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RD2015_2487 Methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D RD2015_775 Chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RD2015_850 membrane protein K03406 mcp; methyl-accepting chemotaxis protein
D RD2015_893 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RD2015_1756 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RD2015_4727 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RD2015_35 Methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein
D RD2015_1141 Chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RD2015_1214 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RD2015_2246 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RD2015_3410 Chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RD2015_4395 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RD2015_764 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein
D RD2015_2244 Methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D RD2015_840 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RD2015_514 Aerotaxis receptor K03776 aer; aerotaxis receptor
D RD2015_2704 Aerotaxis sensor receptor transmembrane protein K03776 aer; aerotaxis receptor
D RD2015_3409 Chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D RD2015_2486 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D RD2015_1704 Chemotaxis signal transduction protein K03408 cheW; purine-binding chemotaxis protein CheW
D RD2015_2481 hypothetical protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RD2015_1706 Chemotaxis sensor histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RD2015_1184 Chemotaxis protein histidine kinase-like protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RD2015_1565 chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RD2015_1749 Response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RD2015_2479 Response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RD2015_2482 Response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RD2015_1707 Chemotaxis signal transduction protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RD2015_2485 Chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RD2015_1183 Chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RD2015_3703 chemotaxis protein K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RD2015_4127 Methyl-accepting chemotaxis sensory transducer K02660 pilJ; twitching motility protein PilJ
D RD2015_4128 chemotaxis protein CheW K02659 pilI; twitching motility protein PilI
D RD2015_4126 Chemotaxis protein CheA K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D RD2015_4130 pilus response regulator PilG K02657 pilG; twitching motility two-component system response regulator PilG
D RD2015_4129 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain K02658 pilH; twitching motility two-component system response regulator PilH
D RD2015_2819 putative histidine kinase, classic K11354 cph1; two-component system, chemotaxis family, sensor kinase Cph1 [EC:2.7.13.3]
D RD2015_4579 histidine kinase K11711 dctS; two-component system, LuxR family, sensor histidine kinase DctS [EC:2.7.13.3]
D RD2015_800 cytochrome C biogenesis protein CcmE K11711 dctS; two-component system, LuxR family, sensor histidine kinase DctS [EC:2.7.13.3]
D RD2015_4578 histidine kinase K11712 dctR; two-component system, LuxR family, response regulator DctR
D RD2015_801 histidine kinase K11712 dctR; two-component system, LuxR family, response regulator DctR
D RD2015_799 C4-dicarboxylate ABC transporter K11688 dctP; C4-dicarboxylate-binding protein DctP
D RD2015_798 C4-dicarboxylate ABC transporter substrate-binding protein K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit
D RD2015_797 putative C4-dicarboxylate transporter large subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D RD2015_1204 Putative polar amino acid transport system ATP-binding protein K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D RD2015_1203 amino acid ABC transporter permease K10002 gltK; glutamate/aspartate transport system permease protein
D RD2015_1202 Putative ABC transporter protein glutamate/aspartate transmembrane subunit K10003 gltJ; glutamate/aspartate transport system permease protein
D RD2015_1201 Periplasmic component of amino acid ABC-type transporter/signal transduction system K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D RD2015_1989 ABC transporter K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D RD2015_1985 catabolite gene activator protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RD2015_2253 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RD2015_3670 hypothetical protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RD2015_1270 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RD2015_1165 Histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D RD2015_1166 Two-component response regulator K15012 regA; two-component system, response regulator RegA
D RD2015_1045 Photosynthetic reaction center M subunit K08929 pufM; photosynthetic reaction center M subunit
D RD2015_1044 Photosynthetic reaction center L subunit K08928 pufL; photosynthetic reaction center L subunit
D RD2015_1043 LH1 alpha subunit K08926 pufA; light-harvesting complex 1 alpha chain
D RD2015_1041 LH1 beta subunit K08927 pufB; light-harvesting complex 1 beta chain
D RD2015_1042 hypothetical protein K08927 pufB; light-harvesting complex 1 beta chain
D RD2015_1008 Reaction center protein H chain K13991 puhA; photosynthetic reaction center H subunit
D RD2015_1295 Ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D RD2015_1296 cytochrome B K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D RD2015_1297 cytochrome C K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D RD2015_2959 Cytochrome c, class I K08738 CYC; cytochrome c
D RD2015_3304 Putative cytochrome C oxidase (Subunit I) transmembrane protein K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D RD2015_3303 Cbb3-type cytochrome c oxidase subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D RD2015_3302 hypothetical protein K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D RD2015_3301 Cbb3-type cytochrome c oxidase subunit K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D RD2015_3278 Cytochrome D ubiquinol oxidase subunit K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D RD2015_3279 cytochrome BD ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D RD2015_3239 type I secretion protein TolC K12340 tolC; outer membrane protein
D RD2015_2104 Outer membrane protein TolC K12340 tolC; outer membrane protein
D RD2015_1809 Polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D RD2015_3885 Polysaccharide export protein Wza K01991 wza; polysaccharide biosynthesis/export protein
D RD2015_509 hypothetical protein K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D RD2015_3863 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D RD2015_2615 cellulase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D RD2015_3374 Endoglucanase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D RD2015_3542 Cellulase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D RD2015_747 endoglucanase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D RD2015_749 Major extracellular endoglucanase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D RD2015_2177 hypothetical protein K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D RD2015_2176 hypothetical protein K07165 fecR; transmembrane sensor
D RD2015_3574 Signal transduction histidine kinase K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3]
D RD2015_3588 sensory box sensor histidine kinase/response regulator K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3]
D RD2015_2668 Histidine kinase K20975 K20975; two-component system, sensor histidine kinase [EC:2.7.13.3]
D RD2015_1768 hypothetical protein K20976 hptB; histidine phosphotransfer protein HptB
D RD2015_1785 hypothetical protein K02398 flgM; negative regulator of flagellin synthesis FlgM
D RD2015_3518 Putative negative regulator of flagellin synthesis LfgM K02398 flgM; negative regulator of flagellin synthesis FlgM
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis [PATH:rdp04148]
D RD2015_2895 Arginase K01476 rocF; arginase [EC:3.5.3.1]
D RD2015_3803 Arginase K01476 rocF; arginase [EC:3.5.3.1]
D RD2015_1295 Ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:rdp02024]
D RD2015_1494 RNA-binding protein Hfq K03666 hfq; host factor-I protein
D RD2015_523 anthranilate synthase subunit I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D RD2015_524 Glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D RD2015_4048 hypothetical protein K12990 rfbF; rhamnosyltransferase [EC:2.4.1.-]
D RD2015_927 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D RD2015_1924 Phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D RD2015_4788 Integral membrane sensor signal transduction histidine kinase K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
D RD2015_4786 Two component, sigma54 specific, transcriptional regulator, Fis family K07715 glrR; two-component system, NtrC family, response regulator GlrR
D RD2015_1741 Flagellar transcriptional regulator FlhD K02403 flhD; flagellar transcriptional activator FlhD
D RD2015_1744 Flagellar transcriptional regulator FlhD K02403 flhD; flagellar transcriptional activator FlhD
D RD2015_1742 Flagellar transcriptional regulator FlhC K02402 flhC; flagellar transcriptional activator FlhC
D RD2015_1745 Flagellar transcriptional regulator FlhC K02402 flhC; flagellar transcriptional activator FlhC
D RD2015_2724 transcriptional regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D RD2015_2808 hypothetical protein K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D RD2015_626 Putative ABC transporter, periplasmic substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D RD2015_623 hypothetical protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D RD2015_624 ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D RD2015_4521 amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RD2015_3426 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RD2015_2016 ABC-type branched-chain amino acid transport system, periplasmic component K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RD2015_1384 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RD2015_2263 Putative high-affinity branched-chain amino acid ABC transporter substrate binding protein LivK K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RD2015_142 Leucine ABC transporter subunit substrate-binding protein LivK K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RD2015_4520 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D RD2015_1385 Branched-chain amino acid ABC-type transport system, permease component K01997 livH; branched-chain amino acid transport system permease protein
D RD2015_592 Inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D RD2015_141 LIV-I protein H K01997 livH; branched-chain amino acid transport system permease protein
D RD2015_2801 LIV-I protein H K01997 livH; branched-chain amino acid transport system permease protein
D RD2015_4519 ABC transporter K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RD2015_593 ABC transporter-related protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RD2015_140 Leucine/isoleucine/valine transporter permease subunit K01998 livM; branched-chain amino acid transport system permease protein
D RD2015_2800 ABC transporter ATP-binding protein K01998 livM; branched-chain amino acid transport system permease protein
D RD2015_1386 ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D RD2015_1387 branched-chain amino acid ABC transporter substrate-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RD2015_144 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RD2015_2799 Putative high-affinity branched-chain amino acid ABC transporter ATP binding protein LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RD2015_594 ABC transporter-related protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RD2015_4518 amino acid ABC transporter ATPase K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RD2015_143 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RD2015_2798 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RD2015_1388 mannosyltransferase K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RD2015_2525 pectate lyase K01728 pel; pectate lyase [EC:4.2.2.2]
D RD2015_2565 Pectate lyase K01728 pel; pectate lyase [EC:4.2.2.2]
D RD2015_1078 pectate lyase K01728 pel; pectate lyase [EC:4.2.2.2]
D RD2015_1468 hypothetical protein K20276 bapA; large repetitive protein
D RD2015_3825 hypothetical protein K20276 bapA; large repetitive protein
D RD2015_4432 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RD2015_4649 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RD2015_4804 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RD2015_1985 catabolite gene activator protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RD2015_2253 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RD2015_3670 hypothetical protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RD2015_1270 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RD2015_4728 GTP cyclohydrolase-2 K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D RD2015_2359 Riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D RD2015_4317 RND efflux system outer membrane lipoprotein K18139 oprM; outer membrane protein, multidrug efflux system
D RD2015_4369 Type I secretion outer membrane protein K18139 oprM; outer membrane protein, multidrug efflux system
D RD2015_2883 NodT family efflux transporter, outer membrane factor (OMF) lipoprotein K18139 oprM; outer membrane protein, multidrug efflux system
D RD2015_3204 ABC-type dipeptide transport system, periplasmic component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RD2015_2541 Extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RD2015_299 Putative binding protein yliB K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RD2015_1470 ABC-type dipeptide transport system, periplasmic component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RD2015_4790 Dipeptide-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RD2015_4792 Putative binding protein component of ABC transporter K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RD2015_3325 ABC transporter permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RD2015_960 ABC transporter permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RD2015_4793 IM pore protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RD2015_2540 Binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RD2015_295 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RD2015_3324 Binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RD2015_962 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RD2015_2539 Binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RD2015_296 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RD2015_4794 ABC transporter permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RD2015_3323 ATPase component ABC-type dipeptide/oligopeptide/nickel transport system K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RD2015_4795 ABC type ATPase K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RD2015_2538 ABC transporter-related protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RD2015_297 ABC transporter K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RD2015_963 methionine ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RD2015_964 ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D RD2015_4842 Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RD2015_4532 Peptidase S8 and S53 subtilisin kexin sedolisin K14645 K14645; serine protease [EC:3.4.21.-]
D RD2015_3889 peptidase S8 K14645 K14645; serine protease [EC:3.4.21.-]
D RD2015_1882 Peptidase S8 and S53 subtilisin kexin sedolisin K14645 K14645; serine protease [EC:3.4.21.-]
D RD2015_539 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D RD2015_3009 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D RD2015_575 Protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D RD2015_599 Preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D RD2015_1305 Protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RD2015_4164 cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D RD2015_4107 Protein-export protein SecB K03071 secB; preprotein translocase subunit SecB
D RD2015_4163 signal recognition particle protein Srp54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D RD2015_488 hypothetical protein K01114 plc; phospholipase C [EC:3.1.4.3]
D RD2015_744 phospholipase K01114 plc; phospholipase C [EC:3.1.4.3]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:rdp02030]
D RD2015_1929 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RD2015_4240 Methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D RD2015_3495 Chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RD2015_1326 Methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D RD2015_4110 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RD2015_1705 Methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D RD2015_3281 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RD2015_1466 Methyl-accepting chemotaxis transducer transmembrane protein K03406 mcp; methyl-accepting chemotaxis protein
D RD2015_2457 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RD2015_2478 Putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RD2015_2487 Methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D RD2015_775 Chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RD2015_850 membrane protein K03406 mcp; methyl-accepting chemotaxis protein
D RD2015_893 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RD2015_1756 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RD2015_4727 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RD2015_35 Methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein
D RD2015_1141 Chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RD2015_1214 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RD2015_2246 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RD2015_3410 Chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RD2015_4395 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RD2015_764 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein
D RD2015_2244 Methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D RD2015_840 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RD2015_514 Aerotaxis receptor K03776 aer; aerotaxis receptor
D RD2015_2704 Aerotaxis sensor receptor transmembrane protein K03776 aer; aerotaxis receptor
D RD2015_3663 Maltose ABC transporter periplasmic protein K10108 malE; maltose/maltodextrin transport system substrate-binding protein
D RD2015_2678 sugar ABC transporter substrate-binding protein K10108 malE; maltose/maltodextrin transport system substrate-binding protein
D RD2015_278 Extracellular solute-binding protein family 5 K12368 dppA; dipeptide transport system substrate-binding protein
D RD2015_2481 hypothetical protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RD2015_1706 Chemotaxis sensor histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RD2015_1184 Chemotaxis protein histidine kinase-like protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RD2015_3409 Chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D RD2015_2486 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D RD2015_1704 Chemotaxis signal transduction protein K03408 cheW; purine-binding chemotaxis protein CheW
D RD2015_1565 chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RD2015_1749 Response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RD2015_2479 Response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RD2015_2482 Response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RD2015_1707 Chemotaxis signal transduction protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RD2015_905 Protein phosphatase CheZ K03414 cheZ; chemotaxis protein CheZ
D RD2015_1750 chemotaxis protein Z K03414 cheZ; chemotaxis protein CheZ
D RD2015_2485 Chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RD2015_1183 Chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RD2015_3703 chemotaxis protein K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RD2015_782 histidine kinase K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D RD2015_3702 chemotaxis protein CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D RD2015_2483 Chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D RD2015_1187 hypothetical protein K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D RD2015_3701 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D RD2015_2088 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D RD2015_3530 Putative lateral flagellar LfiG-like motor switch protein K02410 fliG; flagellar motor switch protein FliG
D RD2015_1729 Flagellar motor switch protein K02410 fliG; flagellar motor switch protein FliG
D RD2015_1723 Flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D RD2015_3534 hypothetical protein K02416 fliM; flagellar motor switch protein FliM
D RD2015_3535 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D RD2015_1722 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D RD2015_1747 Chemotaxis signal transduction protein CheY K02556 motA; chemotaxis protein MotA
D RD2015_3520 Chemotaxis protein LafT K02556 motA; chemotaxis protein MotA
D RD2015_1748 Outer membrane chemotaxis MotB protein K02557 motB; chemotaxis protein MotB
D RD2015_3519 Chemotaxis protein LafU K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:rdp02040]
D RD2015_3532 Flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D RD2015_1731 Flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D RD2015_3531 Flagellar M-ring protein K02409 fliF; flagellar M-ring protein FliF
D RD2015_1730 Flagellar M-ring protein K02409 fliF; flagellar M-ring protein FliF
D RD2015_3530 Putative lateral flagellar LfiG-like motor switch protein K02410 fliG; flagellar motor switch protein FliG
D RD2015_1729 Flagellar motor switch protein K02410 fliG; flagellar motor switch protein FliG
D RD2015_3529 Flagellar assembly FliH family protein K02411 fliH; flagellar assembly protein FliH
D RD2015_1728 Flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D RD2015_3528 ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D RD2015_1727 ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D RD2015_1726 Flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ
D RD2015_3523 hypothetical protein K02414 fliK; flagellar hook-length control protein FliK
D RD2015_1725 hypothetical protein K02414 fliK; flagellar hook-length control protein FliK
D RD2015_3522 Flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D RD2015_1724 Flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D RD2015_1723 Flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D RD2015_3534 hypothetical protein K02416 fliM; flagellar motor switch protein FliM
D RD2015_3535 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D RD2015_1722 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D RD2015_1721 Flagellar biogenesis protein K02418 fliO; flagellar protein FliO/FliZ
D RD2015_3536 Flagellar biosynthesis protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D RD2015_1720 Flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D RD2015_3537 flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D RD2015_1719 Flagellar biosynthesis protein K02420 fliQ; flagellar biosynthesis protein FliQ
D RD2015_3538 flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D RD2015_1718 Flagellar biosynthetic protein fliR K02421 fliR; flagellar biosynthesis protein FliR
D RD2015_1752 Flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D RD2015_3540 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D RD2015_1751 Flagellar biosynthesis protein K02401 flhB; flagellar biosynthesis protein FlhB
D RD2015_3539 flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D RD2015_1784 hypothetical protein K02386 flgA; flagellar basal body P-ring formation protein FlgA
D RD2015_3515 Flagella basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D RD2015_1783 Flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D RD2015_3514 flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D RD2015_1782 flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D RD2015_3513 flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D RD2015_1781 Flagellar basal-body rod modification protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D RD2015_3512 Putative basal-body rod modification protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D RD2015_1780 Flagellar basal body and hook protein K02390 flgE; flagellar hook protein FlgE
D RD2015_3511 flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D RD2015_1779 Flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D RD2015_3510 flagellar basal body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D RD2015_1778 Flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D RD2015_3509 flagellar basal body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D RD2015_1777 Flagellar L-ring protein K02393 flgH; flagellar L-ring protein FlgH
D RD2015_3824 hypothetical protein K02393 flgH; flagellar L-ring protein FlgH
D RD2015_3508 Flagellar L-ring protein K02393 flgH; flagellar L-ring protein FlgH
D RD2015_1776 Flagellar P-ring protein K02394 flgI; flagellar P-ring protein FlgI
D RD2015_3507 Flagellar P-ring protein K02394 flgI; flagellar P-ring protein FlgI
D RD2015_1775 Flagellum-specific muramidase K02395 flgJ; peptidoglycan hydrolase FlgJ
D RD2015_3506 Peptidoglycan hydrolase K02395 flgJ; peptidoglycan hydrolase FlgJ
D RD2015_3516 Peptidoglycan hydrolase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ
D RD2015_1774 Flagellar hook-associated protein 1 K02396 flgK; flagellar hook-associated protein 1
D RD2015_3505 Lateral flagellar hook associated protein 1 LfgK K02396 flgK; flagellar hook-associated protein 1
D RD2015_1773 hypothetical protein K02397 flgL; flagellar hook-associated protein 3 FlgL
D RD2015_3504 Flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL
D RD2015_1736 Flagellin FliC K02406 fliC; flagellin
D RD2015_1737 Flagellin domain protein K02406 fliC; flagellin
D RD2015_1739 Flagellin domain protein K02406 fliC; flagellin
D RD2015_1836 Flagellin p6-like protein K02406 fliC; flagellin
D RD2015_1735 Flagellar hook-associated 2 domain protein K02407 fliD; flagellar hook-associated protein 2
D RD2015_3526 hypothetical protein K02407 fliD; flagellar hook-associated protein 2
D RD2015_1734 Flagellar biosynthetic protein FliS K02422 fliS; flagellar secretion chaperone FliS
D RD2015_3525 flagellar biosynthesis protein FliS K02422 fliS; flagellar secretion chaperone FliS
D RD2015_1733 Putative flagellar protein FliT K02423 fliT; flagellar protein FliT
D RD2015_1747 Chemotaxis signal transduction protein CheY K02556 motA; chemotaxis protein MotA
D RD2015_3520 Chemotaxis protein LafT K02556 motA; chemotaxis protein MotA
D RD2015_1748 Outer membrane chemotaxis MotB protein K02557 motB; chemotaxis protein MotB
D RD2015_3519 Chemotaxis protein LafU K02557 motB; chemotaxis protein MotB
D RD2015_1785 hypothetical protein K02398 flgM; negative regulator of flagellin synthesis FlgM
D RD2015_3518 Putative negative regulator of flagellin synthesis LfgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D RD2015_3517 Flagellar protein LfgN K02399 flgN; flagellar biosynthesis protein FlgN
D RD2015_767 cysteine ABC transporter substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D RD2015_1577 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D RD2015_1741 Flagellar transcriptional regulator FlhD K02403 flhD; flagellar transcriptional activator FlhD
D RD2015_1744 Flagellar transcriptional regulator FlhD K02403 flhD; flagellar transcriptional activator FlhD
D RD2015_1742 Flagellar transcriptional regulator FlhC K02402 flhC; flagellar transcriptional activator FlhC
D RD2015_1745 Flagellar transcriptional regulator FlhC K02402 flhC; flagellar transcriptional activator FlhC
D RD2015_2059 RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D RD2015_4642 RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D RD2015_1755 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
D RD2015_3521 flagellar biosynthesis sigma factor K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D RD2015_2836 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism [PATH:rdp04980]
D RD2015_101 ATP--cobalamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D RD2015_2280 LAO/AO transport system ATPase K07588 MMAA; GTPase [EC:3.6.5.-]
D RD2015_2279 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D RD2015_365 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D RD2015_367 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:rdp01501]
D RD2015_287 Putative membrane protein K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D RD2015_2614 Major facilitator transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D RD2015_533 beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D RD2015_4010 beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D RD2015_4319 multidrug transporter K03585 acrA; membrane fusion protein, multidrug efflux system
D RD2015_2474 Secretion protein HlyD family protein K03585 acrA; membrane fusion protein, multidrug efflux system
D RD2015_4318 acriflavine resistance protein B K18138 acrB; multidrug efflux pump
D RD2015_4317 RND efflux system outer membrane lipoprotein K18139 oprM; outer membrane protein, multidrug efflux system
D RD2015_4369 Type I secretion outer membrane protein K18139 oprM; outer membrane protein, multidrug efflux system
D RD2015_2883 NodT family efflux transporter, outer membrane factor (OMF) lipoprotein K18139 oprM; outer membrane protein, multidrug efflux system
D RD2015_2497 histidine kinase K18143 adeS; two-component system, OmpR family, sensor histidine kinase AdeS [EC:2.7.13.3]
D RD2015_2498 Two component transcriptional regulator K18144 adeR; two-component system, OmpR family, response regulator AdeR
D RD2015_2500 Efflux transporter K18145 adeA; membrane fusion protein, multidrug efflux system
D RD2015_2499 Acriflavine resistance protein B K18146 adeB; multidrug efflux pump
D RD2015_3239 type I secretion protein TolC K12340 tolC; outer membrane protein
D RD2015_2104 Outer membrane protein TolC K12340 tolC; outer membrane protein
D RD2015_967 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D RD2015_2778 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D RD2015_4709 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D RD2015_1220 Penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:rdp01502]
D RD2015_276 D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D RD2015_1228 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RD2015_253 Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D RD2015_1222 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D RD2015_1223 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D RD2015_1226 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-UDP N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:rdp01503]
D RD2015_4762 UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase K10012 arnC; undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [EC:2.4.2.53]
D RD2015_4759 Putative polysaccharide deacetylase K13014 arnD; undecaprenyl phosphate-alpha-L-ara4FN deformylase [EC:3.5.1.-]
D RD2015_1566 Phosphoethanolamine transferase EptA K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D RD2015_1593 transcriptional regulator K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D RD2015_1589 transcriptional regulator K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D RD2015_3169 cell wall hydrolase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D RD2015_2960 Putative protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D RD2015_4019 Protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D RD2015_1206 trypsin K04771 degP; serine protease Do [EC:3.4.21.107]
D RD2015_469 TPR repeat K04771 degP; serine protease Do [EC:3.4.21.107]
D RD2015_4639 Thiol:disulfide interchange protein K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D RD2015_3250 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D RD2015_4319 multidrug transporter K03585 acrA; membrane fusion protein, multidrug efflux system
D RD2015_2474 Secretion protein HlyD family protein K03585 acrA; membrane fusion protein, multidrug efflux system
D RD2015_4318 acriflavine resistance protein B K18138 acrB; multidrug efflux pump
D RD2015_3239 type I secretion protein TolC K12340 tolC; outer membrane protein
D RD2015_2104 Outer membrane protein TolC K12340 tolC; outer membrane protein
D RD2015_1518 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:rdp01000]
C 01001 Protein kinases [BR:rdp01001]
D RD2015_333 Protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D RD2015_2647 Serine/threonine protein kinase with Chase2 sensor K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D RD2015_4699 Putative serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D RD2015_446 hypothetical protein K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D RD2015_4636 Serine/threonine-protein kinase PknB K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D RD2015_1584 HDOD domain-containing protein,protein kinase family protein K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D RD2015_1585 Putative serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D RD2015_3667 phosphatidylinositol kinase K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D RD2015_1669 hypothetical protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D RD2015_2555 Phosphatidylinositol kinase K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D RD2015_4662 hypothetical protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D RD2015_1054 toxin HipA K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D RD2015_2083 anti-sigma regulatory factor K17752 rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1]
D RD2015_1811 Non-specific protein-tyrosine kinase K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D RD2015_3883 tyrosine protein kinase K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D RD2015_2144 Phosphate regulon sensor protein PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D RD2015_3393 Osmolarity sensor protein EnvZ K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D RD2015_1588 hypothetical protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D RD2015_4608 hypothetical protein K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3]
D RD2015_3197 histidine kinase K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3]
D RD2015_4819 histidine kinase K07641 creC; two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3]
D RD2015_2689 Sensor protein CzcS K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D RD2015_2693 histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D RD2015_2725 sensor protein KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D RD2015_4829 Sensor protein QseC K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D RD2015_2497 histidine kinase K18143 adeS; two-component system, OmpR family, sensor histidine kinase AdeS [EC:2.7.13.3]
D RD2015_2961 Signal transduction histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D RD2015_4616 Signal transduction histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D RD2015_4461 histidine kinase K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D RD2015_3596 histidine kinase K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3]
D RD2015_3724 histidine kinase K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3]
D RD2015_1357 histidine kinase K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D RD2015_4553 Nitrogen regulation protein NtrY K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D RD2015_4160 Histidine kinase K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D RD2015_4788 Integral membrane sensor signal transduction histidine kinase K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
D RD2015_2802 hypothetical protein K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D RD2015_1136 Sensor protein ZraS K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D RD2015_3604 hypothetical protein K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D RD2015_2481 hypothetical protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RD2015_1706 Chemotaxis sensor histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RD2015_1184 Chemotaxis protein histidine kinase-like protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RD2015_4126 Chemotaxis protein CheA K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D RD2015_2819 putative histidine kinase, classic K11354 cph1; two-component system, chemotaxis family, sensor kinase Cph1 [EC:2.7.13.3]
D RD2015_4579 histidine kinase K11711 dctS; two-component system, LuxR family, sensor histidine kinase DctS [EC:2.7.13.3]
D RD2015_800 cytochrome C biogenesis protein CcmE K11711 dctS; two-component system, LuxR family, sensor histidine kinase DctS [EC:2.7.13.3]
D RD2015_1165 Histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D RD2015_3574 Signal transduction histidine kinase K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3]
D RD2015_3588 sensory box sensor histidine kinase/response regulator K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3]
D RD2015_2668 Histidine kinase K20975 K20975; two-component system, sensor histidine kinase [EC:2.7.13.3]
D RD2015_1142 GAF sensor hybrid histidine kinase K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:rdp01009]
D RD2015_658 Adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D RD2015_928 Chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
D RD2015_2638 Protein phosphatase 2C-like:Protein phosphatase 2C-like K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D RD2015_4698 protein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D RD2015_3710 protein serine/threonine phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D RD2015_1478 serine/threonine protein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D RD2015_3401 Phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:rdp01002]
D RD2015_3597 Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D RD2015_999 peptidase A24 K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D RD2015_2350 pyrrolidone-carboxylate peptidase K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3]
D RD2015_3356 GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D RD2015_328 ABC transporter, HlyB/MsbA family K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D RD2015_3292 putative ATP-binding cassette sub-family B member 9-like K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D RD2015_2304 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D RD2015_977 glutamate synthase K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D RD2015_675 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D RD2015_532 iron dicitrate transport regulator FecR K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D RD2015_1819 Asparagine synthetase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D RD2015_2943 Asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D RD2015_4832 glutamine amidotransferase K05520 yhbO; deglycase [EC:3.5.1.124]
D RD2015_2400 Abortive infection protein K07052 K07052; CAAX protease family protein
D RD2015_176 CAAX prenyl protease-related protein K07052 K07052; CAAX protease family protein
D RD2015_4498 hypothetical protein K07052 K07052; CAAX protease family protein
D RD2015_1613 aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D RD2015_4513 peptidyl-dipeptidase K01283 ACE; peptidyl-dipeptidase A [EC:3.4.15.1]
D RD2015_1331 Putative oligopeptidase A K01414 prlC; oligopeptidase A [EC:3.4.24.70]
D RD2015_61 Putative peptidyl dipeptidase/oligopeptidase K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5]
D RD2015_3562 Peptidyl-dipeptidase Dcp K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5]
D RD2015_2455 hemagglutinin K08604 hap; vibriolysin [EC:3.4.24.25]
D RD2015_845 peptidase M13 K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D RD2015_4474 Peptidase M13 K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D RD2015_276 D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D RD2015_311 hypothetical protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D RD2015_1330 Putative Zn-dependent peptidase K07263 pqqL; zinc protease [EC:3.4.24.-]
D RD2015_312 hypothetical protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D RD2015_4543 Zinc protease-like peptidase K07263 pqqL; zinc protease [EC:3.4.24.-]
D RD2015_2261 putative cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D RD2015_4816 cytochrome C oxidase subunit II K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D RD2015_260 Putative glutamate carboxypeptidase K01295 cpg; glutamate carboxypeptidase [EC:3.4.17.11]
D RD2015_2313 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D RD2015_1319 peptidase M20 K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D RD2015_519 methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D RD2015_2099 Methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D RD2015_652 proline dipeptidase K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9]
D RD2015_3680 Xaa-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D RD2015_1249 Carboxypeptidase Taq K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19]
D RD2015_2135 cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D RD2015_3558 Zn-dependent protease with chaperone function K06013 STE24; STE24 endopeptidase [EC:3.4.24.84]
D RD2015_608 Protease HtpX-like protein K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D RD2015_4688 TPR repeat-containing protein YfgC K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-]
D RD2015_1513 RIP metalloprotease RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D RD2015_2472 Peptidase family M50 K16922 yydH; putative peptide zinc metalloprotease protein
D RD2015_2317 hypothetical protein K21429 impA; immunomodulating metalloprotease
D RD2015_906 hypothetical protein K09933 mtfA; MtfA peptidase
D RD2015_3253 membrane protein K09933 mtfA; MtfA peptidase
D RD2015_2960 Putative protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D RD2015_4019 Protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D RD2015_1206 trypsin K04771 degP; serine protease Do [EC:3.4.21.107]
D RD2015_469 TPR repeat K04771 degP; serine protease Do [EC:3.4.21.107]
D RD2015_1290 Trypsin-like serine protease with PDZ domain K04772 degQ; serine protease DegQ [EC:3.4.21.-]
D RD2015_4532 Peptidase S8 and S53 subtilisin kexin sedolisin K14645 K14645; serine protease [EC:3.4.21.-]
D RD2015_3889 peptidase S8 K14645 K14645; serine protease [EC:3.4.21.-]
D RD2015_1882 Peptidase S8 and S53 subtilisin kexin sedolisin K14645 K14645; serine protease [EC:3.4.21.-]
D RD2015_1318 Prolyl oligopeptidase, Serine peptidase, MEROPS family S09A K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26]
D RD2015_3570 Serine protease, S9A family peptidase K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26]
D RD2015_4277 hypothetical protein K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D RD2015_3483 hypothetical protein K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D RD2015_768 Protease II K01354 ptrB; oligopeptidase B [EC:3.4.21.83]
D RD2015_4452 cytochrome C550 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D RD2015_3020 D-alanyl-D-alanine endopeptidase PbpG K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-]
D RD2015_1445 peptidase S11 K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-]
D RD2015_273 hypothetical protein K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D RD2015_1454 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D RD2015_1456 DNA-binding protein K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D RD2015_3264 LexA family transcriptional regulator K01356 lexA; repressor LexA [EC:3.4.21.88]
D RD2015_2307 LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D RD2015_3066 signal peptidase K03100 lepB; signal peptidase I [EC:3.4.21.89]
D RD2015_4017 Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D RD2015_3797 Carboxyl-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D RD2015_343 Peptidase S41 K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D RD2015_345 Peptidase S41 K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D RD2015_940 Putative tricorn protease K08676 tri; tricorn protease [EC:3.4.21.-]
D RD2015_3171 peptidase S41 K08676 tri; tricorn protease [EC:3.4.21.-]
D RD2015_3918 hypothetical protein K08676 tri; tricorn protease [EC:3.4.21.-]
D RD2015_3901 Penicillin amidase K01434 pac; penicillin G amidase [EC:3.5.1.11]
D RD2015_301 Peptidase S45 family protein K01434 pac; penicillin G amidase [EC:3.5.1.11]
D RD2015_4600 Protease 4 K04773 sppA; protease IV [EC:3.4.21.-]
D RD2015_4001 Putative S49 family peptidase K04773 sppA; protease IV [EC:3.4.21.-]
D RD2015_844 hypothetical protein K13282 cphB; cyanophycinase [EC:3.4.15.6]
D RD2015_1556 Cyanophycinase-related exopeptidase K13282 cphB; cyanophycinase [EC:3.4.15.6]
D RD2015_3205 Cyanophycinase-related exopeptidase K13282 cphB; cyanophycinase [EC:3.4.15.6]
D RD2015_2793 membrane protein K07059 K07059; rhomboid family protein
D RD2015_3327 muramoyltetrapeptide carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D RD2015_264 Peptidase S66 K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D RD2015_275 Peptidase U61 LD-carboxypeptidase A K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D RD2015_4391 ATP-dependent protease subunit HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D RD2015_3581 Isoaspartyl peptidase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D RD2015_2553 gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RD2015_3982 Gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RD2015_2823 peptidase C69 K03592 pmbA; PmbA protein
D RD2015_926 Peptidase U62 modulator of DNA gyrase K03568 tldD; TldD protein
D RD2015_1684 Large extracellular alpha-helical protein K06894 yfhM; alpha-2-macroglobulin
D RD2015_1497 Protein HflC K04087 hflC; modulator of FtsH protease HflC
D RD2015_1496 membrane protein K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases [BR:rdp01003]
D RD2015_4148 Penicillin-binding protein F K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D RD2015_967 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D RD2015_2778 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D RD2015_3873 Glycosyl transferase, WecB/TagA/CpsF family K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D RD2015_4784 putative periplasmic glucans biosynthesis transmembrane protein K03669 mdoH; membrane glycosyltransferase [EC:2.4.1.-]
D RD2015_2919 hypothetical protein K13688 chvB; cyclic beta-1,2-glucan glucanotransferase [EC:2.4.1.397]
D RD2015_2067 Alpha,alpha-trehalose-phosphate synthase K16055 TPS; trehalose 6-phosphate synthase/phosphatase [EC:2.4.1.15 3.1.3.12]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:rdp01005]
D RD2015_1518 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D RD2015_1519 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D RD2015_1233 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D RD2015_1516 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D RD2015_3252 UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D RD2015_3311 Tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D RD2015_667 lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D RD2015_1700 aspartyl beta-hydroxylase K12979 lpxO; beta-hydroxylase [EC:1.14.11.-]
D RD2015_2940 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D RD2015_2348 Three-deoxy-D-manno-octulosonic-acid transferase domain protein K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D RD2015_1566 Phosphoethanolamine transferase EptA K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D RD2015_3864 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D RD2015_3313 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D RD2015_4827 3-deoxy-manno-octulosonate-8-phosphatase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D RD2015_4828 arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D RD2015_722 D-alpha,beta-D-heptose 7-phosphate 1-kinase RfaE K21344 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase [EC:2.7.1.167]
D RD2015_2042 Bifunctional protein RfaE, domain I K21344 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase [EC:2.7.1.167]
D RD2015_723 ADP-heptose synthase K21345 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase [EC:2.7.7.70]
D RD2015_2043 Sugar metabolism enzyme K21345 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase [EC:2.7.7.70]
D RD2015_725 Glycosyl transferase family 9 K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D RD2015_726 Glycosyl transferase family 9 K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D RD2015_4774 Sulfatase K19353 eptC; heptose-I-phosphate ethanolaminephosphotransferase [EC:2.7.8.-]
D RD2015_4053 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D RD2015_721 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D RD2015_923 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D RD2015_2041 Phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D RD2015_724 D,D-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D RD2015_4383 histidinol phosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D RD2015_4048 hypothetical protein K12990 rfbF; rhamnosyltransferase [EC:2.4.1.-]
D RD2015_4218 glycosyl transferase family 2 K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
D RD2015_3201 glycosyltransferase K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:rdp01011]
D RD2015_4808 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D RD2015_3575 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D RD2015_1227 UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D RD2015_1224 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D RD2015_1221 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D RD2015_1228 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RD2015_253 Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D RD2015_1461 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D RD2015_3327 muramoyltetrapeptide carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D RD2015_264 Peptidase S66 K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D RD2015_275 Peptidase U61 LD-carboxypeptidase A K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D RD2015_1223 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D RD2015_1226 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-UDP N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D RD2015_2100 UDP pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D RD2015_3633 membrane protein K03980 murJ; putative peptidoglycan lipid II flippase
D RD2015_967 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D RD2015_2778 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D RD2015_4709 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D RD2015_1220 Penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D RD2015_4452 cytochrome C550 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D RD2015_273 hypothetical protein K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D RD2015_3020 D-alanyl-D-alanine endopeptidase PbpG K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-]
D RD2015_1445 peptidase S11 K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-]
D RD2015_4148 Penicillin-binding protein F K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D RD2015_276 D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D RD2015_646 Putative transglycosylase K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D RD2015_503 transglycosylase K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29]
D RD2015_1965 lytic transglycosylase K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D RD2015_3744 Lytic transglycosylase catalytic subunit K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D RD2015_3156 aminodeoxychorismate lyase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D RD2015_213 Putative lipoprotein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D RD2015_3169 cell wall hydrolase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D RD2015_283 N-acetylmuramoyl-L-alanine amidase K11066 amiD; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:rdp01004]
D RD2015_3339 Acyl transferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D RD2015_4024 ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D RD2015_4025 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D RD2015_863 Conserved hypothetical protein, Thiolase-like K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D RD2015_2652 hypothetical protein K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D RD2015_4021 3-oxoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D RD2015_3602 Short chain dehydrogenase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RD2015_2690 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RD2015_4023 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RD2015_1517 3-hydroxyacyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D RD2015_2913 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D RD2015_1375 Arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D RD2015_1198 Acyl-CoA hydrolase-like protein K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
D RD2015_3188 aminotransferase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D RD2015_1980 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RD2015_1620 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RD2015_3038 acetyl-CoA synthetase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D RD2015_4432 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RD2015_4649 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RD2015_4804 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RD2015_3572 Acyl-CoA synthetase/AMP-acid ligase II K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D RD2015_4026 Phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D RD2015_1629 Glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D RD2015_4115 Phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D RD2015_4382 acyl-phosphate glycerol 3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:rdp01006]
D RD2015_1649 Geranylgeranyl pyrophosphate synthase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D RD2015_1034 Geranyltranstransferase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D RD2015_1055 octaprenyl diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D RD2015_1510 UDP diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D RD2015_1449 phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D RD2015_1028 Phytoene/squalene synthetase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D RD2015_3175 tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D RD2015_138 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D RD2015_4092 Protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D RD2015_1018 BchG K04040 chlG; chlorophyll/bacteriochlorophyll a synthase [EC:2.5.1.62 2.5.1.133]
C 01007 Amino acid related enzymes [BR:rdp01007]
D RD2015_2306 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RD2015_3477 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D RD2015_2093 glutamyl-tRNA synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D RD2015_937 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RD2015_3193 Tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D RD2015_4805 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D RD2015_3248 Cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D RD2015_4637 Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RD2015_1795 Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D RD2015_3590 Isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D RD2015_2787 Valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D RD2015_4570 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RD2015_4066 Lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D RD2015_3827 Aspartate--tRNA(Asp/Asn) ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RD2015_1490 Histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D RD2015_4385 Glycine--tRNA ligase alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D RD2015_4384 glycyl-tRNA synthetase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D RD2015_3691 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D RD2015_1061 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D RD2015_1412 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D RD2015_1691 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D RD2015_1416 phenylalanyl-tRNA synthetase K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D RD2015_1417 phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D RD2015_685 aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RD2015_3032 Aminotransferase AlaT K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D RD2015_2004 aspartate aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D RD2015_262 aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D RD2015_2256 Aminotransferase K14287 ybdL; methionine transaminase [EC:2.6.1.88]
D RD2015_2316 succinyldiaminopimelate aminotransferase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
D RD2015_1085 hypothetical protein K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RD2015_4188 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RD2015_2984 2-amino-3-ketobutyrate CoA ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D RD2015_4342 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D RD2015_2860 omega amino acid--pyruvate aminotransferase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D RD2015_3638 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D RD2015_4343 Aminotransferase class-III K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D RD2015_2440 glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D RD2015_4133 glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D RD2015_4140 glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D RD2015_4451 Branched subunit Amino acid: 2-keto-4-methylthiobutyrate aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D RD2015_245 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RD2015_3556 putative p-aminobenzoate-synthase component K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38]
D RD2015_1863 Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D RD2015_4063 Lipopolysaccharide biosynthesis protein K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
D RD2015_2936 TDP-4-oxo-6-deoxy-D-glucose transaminase K13010 per; perosamine synthetase [EC:2.6.1.102]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:rdp00194]
D RD2015_3494 Ferredoxin-1 K02639 petF; ferredoxin
D RD2015_423 ATP synthase F0F1 subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D RD2015_422 F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D RD2015_421 ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D RD2015_420 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D RD2015_419 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D RD2015_418 ATP synthase subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D RD2015_417 ATP synthase F0F1 subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D RD2015_416 ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D RD2015_415 Putative ATP synthase protein I AtpI K02116 atpI; ATP synthase protein I
D RD2015_1044 Photosynthetic reaction center L subunit K08928 pufL; photosynthetic reaction center L subunit
D RD2015_1045 Photosynthetic reaction center M subunit K08929 pufM; photosynthetic reaction center M subunit
D RD2015_1008 Reaction center protein H chain K13991 puhA; photosynthetic reaction center H subunit
D RD2015_1047 Photosynthetic reaction center cytochrome c subunit K13992 pufC; photosynthetic reaction center cytochrome c subunit
D RD2015_1043 LH1 alpha subunit K08926 pufA; light-harvesting complex 1 alpha chain
D RD2015_1041 LH1 beta subunit K08927 pufB; light-harvesting complex 1 beta chain
D RD2015_1042 hypothetical protein K08927 pufB; light-harvesting complex 1 beta chain
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:rdp03000]
D RD2015_3254 AraC family transcriptional regulator K18991 mtrA; AraC family transcriptional regulator, activator of mtrCDE
D RD2015_2346 Ada K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D RD2015_4418 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain K13633 ftrA; AraC family transcriptional regulator, transcriptional activator FtrA
D RD2015_1559 Transcriptional regulator AraC family K21825 argR; AraC family transcriptional regulator, L-arginine-responsive activator
D RD2015_3706 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D RD2015_648 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D RD2015_4235 LysR family transcriptional regulator K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA
D RD2015_64 Transcriptional regulator, LysR family K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA
D RD2015_154 Morphology and auto-aggregation control protein K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D RD2015_203 Transcriptional regulator, LysR family K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D RD2015_2257 CysB family transcriptional regulator K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator
D RD2015_77 CysB family transcriptional regulator K13635 cbl; LysR family transcriptional regulator, cys regulon transcriptional activator
D RD2015_79 Transcriptional regulator, LysR family K13635 cbl; LysR family transcriptional regulator, cys regulon transcriptional activator
D RD2015_3349 Transcriptional regulator, LysR family K13928 mdcR; LysR family transcriptional regulator, malonate utilization transcriptional regulator
D RD2015_807 transcriptional regulator K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC
D RD2015_4802 Transcriptional regulator, LysR family K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC
D RD2015_1200 Transcriptional regulator, LysR family K21645 hypT; LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT
D RD2015_177 LysR family transcriptional regulator K21698 aaeR; LysR family transcriptional regulator, transcriptional activator for aaeXAB operon
D RD2015_2448 LysR family transcriptional regulator K23773 hdfR; LysR family transcriptional regulator, flagellar master operon regulator
D RD2015_315 DeoR faimly transcriptional regulator K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D RD2015_1126 DeoR family regulatory protein K02081 agaR; DeoR family transcriptional regulator, aga operon transcriptional repressor
D RD2015_629 DeoR-like helix-turn-helix domain-containing protein 2 K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D RD2015_4478 transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D RD2015_2608 Transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D RD2015_2752 Transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D RD2015_2809 Transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D RD2015_3377 GntR family transcriptional regulator K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
D RD2015_773 LacI family transcription regulator K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
D RD2015_2974 LacI family transcriptional regulator K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
D RD2015_3815 Histidine utilization repressor K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor
D RD2015_530 GntR family transcriptional regulator K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
D RD2015_2759 Transcriptional regulator, GntR family K03710 K03710; GntR family transcriptional regulator
D RD2015_3973 GntR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D RD2015_4320 TetR family transcriptional regulator K03577 acrR; TetR/AcrR family transcriptional regulator, acrAB operon repressor
D RD2015_1280 Division inhibitor protein K05501 slmA; TetR/AcrR family transcriptional regulator
D RD2015_1215 TetR family transcriptional regulator K19736 aefR; TetR/AcrR family transcriptional regulator, regulator of autoinduction and epiphytic fitness
D RD2015_2323 Transcriptional regulator, TetR family K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D RD2015_1406 TetR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D RD2015_2526 TetR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D RD2015_1830 TetR family transcriptional regulator K23777 cecR; TetR/AcrR family transcriptional regulator, regulator of cefoperazone and chloramphenicol sensitivity
D RD2015_4429 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D RD2015_132 ArsR family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D RD2015_468 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D RD2015_674 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D RD2015_902 Transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D RD2015_2859 Transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D RD2015_3183 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D RD2015_661 Transcriptional regulator K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
D RD2015_1158 Transcriptional regulator, MarR family K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D RD2015_2310 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D RD2015_166 Organic hydroperoxide resistance transcriptional regulator, MarR family K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D RD2015_4355 Transcriptional regulator, MerR family K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D RD2015_2533 hypothetical protein K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator
D RD2015_4565 Ferric uptake regulator family protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D RD2015_4471 IclR family transcriptional regulator K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein
D RD2015_1348 Beta-ketoadipate pathway transcriptional regulator, PcaR/PcaU/PobR family K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein
D RD2015_2564 transcriptional regulator K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
D RD2015_1985 catabolite gene activator protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RD2015_2253 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RD2015_3670 hypothetical protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RD2015_1270 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RD2015_2431 Transcriptional regulator, Crp/Fnr family K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D RD2015_3966 hypothetical protein K21564 nnrR; CRP/FNR family transcriptional regulator, nitrogen oxide reductase regulator
D RD2015_2008 Iron-sulfur cluster assembly transcription factor IscR K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D RD2015_2386 ArsR family transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D RD2015_2985 DNA-binding protein K23779 sutR; XRE family transcriptional regulator, regulator of sulfur utilization
D RD2015_991 transcriptional regulator K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator
D RD2015_4534 hypothetical protein K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D RD2015_1245 Fis family transcriptional regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D RD2015_4335 transcriptional regulator K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22]
D RD2015_3799 hypothetical protein K13655 mqsA; HTH-type transcriptional regulator / antitoxin MqsA
D RD2015_3997 XRE family transcriptional regulator K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB
D RD2015_516 Sigma54 specific transcriptional regulator with GAF sensor, Fis family K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D RD2015_3015 Transcriptional regulator, NifA subfamily, Fis Family K12266 norR; anaerobic nitric oxide reductase transcription regulator
D RD2015_226 Putative transcriptional regulator, ModE family K02019 modE; molybdate transport system regulatory protein
D RD2015_2831 DNA-binding protein K07726 K07726; putative transcriptional regulator
D RD2015_1625 Cro/Cl family transcriptional regulator K07727 K07727; putative transcriptional regulator
D RD2015_133 integrase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D RD2015_2450 Transcriptional repressor frmR K23239 frmR; FrmR/RcnR family transcriptional regulator, repressor of frmRAB operon
D RD2015_1379 BolA-like family protein K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D RD2015_107 ParB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RD2015_1107 Heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D RD2015_4118 uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D RD2015_3243 Negative transcriptional regulator K07734 paiB; transcriptional regulator
D RD2015_3496 FMN-binding negative transcriptional regulator K07734 paiB; transcriptional regulator
D RD2015_4120 hypothetical protein K07735 algH; putative transcriptional regulator
D RD2015_4389 conjugal transfer protein TraR K06204 dksA; RNA polymerase-binding transcription factor
D RD2015_2368 NrdR family transcriptional regulator K07738 nrdR; transcriptional repressor NrdR
D RD2015_36 Transcriptional regulator K14414 rtcR; transcriptional regulatory protein RtcR
D RD2015_1217 cell division protein MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:rdp03021]
D RD2015_581 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D RD2015_545 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D RD2015_546 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D RD2015_3714 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D RD2015_1577 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D RD2015_2125 RNA polymerase sigma factor K03087 rpoS; RNA polymerase nonessential primary-like sigma factor
D RD2015_2718 RNA polymerase sigma-e factor sigma-24 K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D RD2015_2177 hypothetical protein K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D RD2015_4086 RNA polymerase sigma factor RpoH K03089 rpoH; RNA polymerase sigma-32 factor
D RD2015_2059 RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D RD2015_4642 RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D RD2015_1755 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
D RD2015_3521 flagellar biosynthesis sigma factor K02405 fliA; RNA polymerase sigma factor FliA
D RD2015_2911 transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D RD2015_2356 N utilization substance protein B K03625 nusB; transcription antitermination protein NusB
D RD2015_540 antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D RD2015_1298 glutathione S-transferase K03599 sspA; stringent starvation protein A
D RD2015_1299 starvation protein B K03600 sspB; stringent starvation protein B
D RD2015_2083 anti-sigma regulatory factor K17752 rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1]
D RD2015_2084 putative signal transduction protein K17762 rsbS; rsbT antagonist protein RsbS
D RD2015_2085 putative signal transduction protein K17763 rsbR; rsbT co-antagonist protein RsbR
D RD2015_4389 conjugal transfer protein TraR K06204 dksA; RNA polymerase-binding transcription factor
D RD2015_2131 Transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D RD2015_3716 transcription elongation factor GreB K04760 greB; transcription elongation factor GreB
D RD2015_2147 transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:rdp03019]
D RD2015_4005 ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D RD2015_3464 ribonuclease K08301 rng; ribonuclease G [EC:3.1.26.-]
D RD2015_4015 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D RD2015_1503 Ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D RD2015_4581 Guanyl-specific ribonuclease Sa-like protein K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24]
D RD2015_3557 Oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D RD2015_4223 RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D RD2015_4031 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D RD2015_2698 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D RD2015_4670 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D RD2015_2836 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RD2015_3012 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D RD2015_2147 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D RD2015_1569 Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D RD2015_4257 molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RD2015_1494 RNA-binding protein Hfq K03666 hfq; host factor-I protein
D RD2015_1639 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D RD2015_4292 Polyphosphate kinase 2, PA0141 family K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D RD2015_428 Putative polyphosphate kinase K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D RD2015_3629 poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D RD2015_1060 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D RD2015_3402 ribonuclease K02553 rraA; regulator of ribonuclease activity A
D RD2015_1104 nucleotide-binding protein K06958 rapZ; RNase adapter protein RapZ
D RD2015_1583 ATP-dependent helicase K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:rdp03011]
D RD2015_1859 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D RD2015_1506 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D RD2015_560 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D RD2015_580 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D RD2015_572 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D RD2015_1525 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D RD2015_550 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D RD2015_569 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D RD2015_933 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D RD2015_553 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D RD2015_579 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D RD2015_549 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D RD2015_578 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D RD2015_568 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D RD2015_3013 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D RD2015_3623 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D RD2015_563 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D RD2015_1527 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D RD2015_558 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D RD2015_3634 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D RD2015_1996 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D RD2015_542 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D RD2015_557 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D RD2015_554 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D RD2015_555 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D RD2015_567 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D RD2015_570 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D RD2015_1528 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D RD2015_543 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D RD2015_541 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D RD2015_544 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D RD2015_932 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D RD2015_565 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D RD2015_574 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D RD2015_561 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D RD2015_582 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D RD2015_571 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D RD2015_3620 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D RD2015_1415 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D RD2015_1056 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D RD2015_559 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D RD2015_556 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D RD2015_566 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D RD2015_1057 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D RD2015_1983 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D RD2015_562 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D RD2015_573 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D RD2015_2146 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D RD2015_4027 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D RD2015_1982 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D RD2015_4845 hypothetical protein K02914 RP-L34; large subunit ribosomal protein L34
D RD2015_1414 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D RD2015_577 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D RD2015_1096 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D RD2015_R031 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D RD2015_R026 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D RD2015_R064 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D RD2015_R069 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D RD2015_R027 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RD2015_R068 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RD2015_R071 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RD2015_R024 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RD2015_R025 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RD2015_R030 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RD2015_R065 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RD2015_R070 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:rdp03009]
D RD2015_4015 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D RD2015_3557 Oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D RD2015_4014 GTPase Era K03595 era; GTPase
D RD2015_1058 GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-]
D RD2015_4389 conjugal transfer protein TraR K06204 dksA; RNA polymerase-binding transcription factor
D RD2015_2911 transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D RD2015_2356 N utilization substance protein B K03625 nusB; transcription antitermination protein NusB
D RD2015_540 antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D RD2015_3585 Pseudouridine synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D RD2015_4584 16S rRNA methyltransferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D RD2015_3189 SAM-dependent methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D RD2015_4551 Ribosomal RNA small subunit methyltransferase B K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D RD2015_4183 methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D RD2015_4646 Ribosomal RNA small subunit methyltransferase E K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D RD2015_113 16S rRNA methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D RD2015_1218 Ribosomal RNA small subunit methyltransferase H K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D RD2015_925 16S rRNA methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D RD2015_4030 Putative transmembrane protein K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D RD2015_657 Hemolysin K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D RD2015_3501 23S rRNA methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D RD2015_2134 23S rRNA methyltransferase K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D RD2015_3466 50S rRNA methyltransferase K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D RD2015_4200 Putative SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D RD2015_673 23S rRNA methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D RD2015_179 competence protein ComJ K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266]
D RD2015_4643 Putative N6-adenine-specific DNA methylase K25137 rlmL; 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.173]
D RD2015_3397 Radical SAM superfamily protein K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D RD2015_1486 Dual-specificity RNA methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D RD2015_2126 23S rRNA methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D RD2015_3616 pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D RD2015_4809 Pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D RD2015_1484 Pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D RD2015_4004 Pseudouridine synthase K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D RD2015_1482 Pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D RD2015_3174 pseudouridylate synthase K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
D RD2015_639 Ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D RD2015_3622 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D RD2015_3366 Ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D RD2015_4154 Ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D RD2015_2312 Putative methyltransferase K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298]
D RD2015_1906 cupin K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47]
D RD2015_4005 ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D RD2015_3464 ribonuclease K08301 rng; ribonuclease G [EC:3.1.26.-]
D RD2015_4119 Putative Holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D RD2015_4224 DEAD/DEAH box helicase K05591 dbpA; ATP-dependent RNA helicase DbpA [EC:5.6.2.6]
D RD2015_3559 GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D RD2015_1493 GTP-binding protein Der K03977 engA; GTPase
D RD2015_909 Ribosome biogenesis GTPase A K14540 rbgA; ribosome biogenesis GTPase A
D RD2015_1495 GTPase HflX K03665 hflX; GTPase
D RD2015_634 translation factor Sua5 K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D RD2015_3715 guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D RD2015_2909 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D RD2015_3403 RNA-binding protein K14761 rlbA; ribosome-associated protein
D RD2015_3467 iojap family protein K09710 ybeB; ribosome-associated protein
D RD2015_4459 rRNA maturation factor K07042 ybeY; probable rRNA maturation factor
D RD2015_2133 RNA-binding protein K07574 yhbY; RNA-binding protein
D RD2015_2824 hypothetical protein K09889 yjgA; ribosome-associated protein
D RD2015_4562 Ribosomal subunit interface protein K05808 hpf; ribosome hibernation promoting factor
D RD2015_4075 GTP-binding protein K06942 ychF; ribosome-binding ATPase
D RD2015_4028 hypothetical protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:rdp03016]
D RD2015_4581 Guanyl-specific ribonuclease Sa-like protein K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24]
D RD2015_643 Multifunctional CCA protein K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D RD2015_46 RNA ligase K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
D RD2015_2306 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RD2015_1061 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D RD2015_3590 Isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D RD2015_4570 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RD2015_1795 Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D RD2015_3477 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D RD2015_4637 Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RD2015_4066 Lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D RD2015_3827 Aspartate--tRNA(Asp/Asn) ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RD2015_1691 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D RD2015_1412 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D RD2015_3691 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D RD2015_3248 Cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D RD2015_2787 Valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D RD2015_1490 Histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D RD2015_1416 phenylalanyl-tRNA synthetase K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D RD2015_1417 phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D RD2015_937 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RD2015_3193 Tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D RD2015_4805 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D RD2015_1275 D-aminoacyl-tRNA deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D RD2015_1286 Putative histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D RD2015_1902 tRNA (guanine-N7)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D RD2015_2296 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D RD2015_2908 tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D RD2015_3656 tRNA pseudouridine synthase D K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
D RD2015_2009 Cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RD2015_660 hypothetical protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RD2015_634 translation factor Sua5 K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D RD2015_3175 tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D RD2015_4841 tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D RD2015_114 tRNA uridine 5-carboxymethylaminomethyl modification protein K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D RD2015_584 segregation protein A K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D RD2015_4844 hypothetical protein K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D RD2015_R012 Bacterial RNase P class A K01978 rnpB; M1 RNA
D RD2015_3709 Ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D RD2015_4145 ribonuclease II K01147 rnb; exoribonuclease II [EC:3.1.13.1]
D RD2015_3690 putative RNA 2'-phosphotransferase K07559 kptA; putative RNA 2'-phosphotransferase [EC:2.7.1.-]
D RD2015_3203 ABC transporter ATP-binding protein K06020 ettA; energy-dependent translational throttle protein EttA
D RD2015_4385 Glycine--tRNA ligase alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D RD2015_4384 glycyl-tRNA synthetase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D RD2015_2093 glutamyl-tRNA synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D RD2015_3328 tRNA-specific adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D RD2015_2866 tRNA-dihydrouridine synthase A K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
D RD2015_1246 tRNA-dihydrouridine synthase B K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D RD2015_3484 tRNA-dihydrouridine synthase K05541 dusC; tRNA-dihydrouridine synthase C [EC:1.-.-.-]
D RD2015_1072 (dimethylallyl)adenosine tRNA methylthiotransferase K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D RD2015_2828 rRNA methyltransferase K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-]
D RD2015_3621 tRNA (guanine-N(1)-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D RD2015_4105 rRNA methylase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D RD2015_1521 rRNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family
D RD2015_1664 Pseudouridine synthase K06175 truC; tRNA pseudouridine65 synthase [EC:5.4.99.26]
D RD2015_3616 pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D RD2015_4809 Pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D RD2015_4657 thiouridylase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D RD2015_4267 tRNA 2-thiocytidine biosynthesis protein TtcA K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D RD2015_2790 SirA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D RD2015_2011 heme biosynthesis protein HemY K13628 iscA; iron-sulfur cluster assembly protein
D RD2015_3157 folate-binding protein K06980 ygfZ; tRNA-modifying protein YgfZ
D RD2015_1931 oxidoreductase K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-]
D RD2015_158 S-adenosylmethionine tRNA ribosyltransferase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D RD2015_4545 7-cyano-7-deazaguanine synthase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D RD2015_91 6-pyruvoyl tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D RD2015_92 7-cyano-7-deazaguanine reductase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D RD2015_2319 7-cyano-7-deazaguanine reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D RD2015_3167 epoxyqueuosine reductase K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D RD2015_2097 tRNA 2-selenouridine synthase K06917 selU; tRNA 2-selenouridine synthase [EC:2.9.1.3]
D RD2015_164 Queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D RD2015_3245 tRNA(Ile)-lysidine synthase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D RD2015_638 peptidase M22 K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D RD2015_2015 protein kinase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D RD2015_3168 ATPase K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D RD2015_3459 heme biosynthesis protein HemY K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D RD2015_1808 UBA/THIF-type NAD/FAD binding protein K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D RD2015_1503 Ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D RD2015_3012 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:rdp03012]
D RD2015_3482 translation initiation factor SUI1 K03113 EIF1; translation initiation factor 1
D RD2015_2910 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D RD2015_2311 ABC transporter-like protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D RD2015_1507 elongation factor Ts K02357 tsf; elongation factor Ts
D RD2015_538 elongation factor Tu K02358 tuf; elongation factor Tu
D RD2015_552 elongation factor Tu K02358 tuf; elongation factor Tu
D RD2015_4239 elongation factor G K02355 fusA; elongation factor G
D RD2015_551 elongation factor G K02355 fusA; elongation factor G
D RD2015_3140 elongation factor G K02355 fusA; elongation factor G
D RD2015_4423 elongation factor G K02355 fusA; elongation factor G
D RD2015_3451 selenocysteine-specific elongation factor K03833 selB; selenocysteine-specific elongation factor
D RD2015_1068 peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D RD2015_1509 ribosome recycling factor K02838 frr; ribosome recycling factor
D RD2015_1658 Methyltransferase family protein K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D RD2015_1067 Release factor glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D RD2015_1095 Peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D RD2015_2162 Translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D RD2015_576 Translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D RD2015_2109 Elongation factor P K02356 efp; elongation factor P
D RD2015_1614 Peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D RD2015_147 peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
D RD2015_252 Class I peptide chain release factor K15034 yaeJ; ribosome-associated protein
C 03110 Chaperones and folding catalysts [BR:rdp03110]
D RD2015_3269 ATP-dependent Clp protease ATP-binding protein K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D RD2015_2090 ATP-dependent Clp protease ATP-binding subunit ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D RD2015_1455 Clp protease ATP-binding protein K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D RD2015_4392 ATP-dependent protease ATP-binding subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D RD2015_928 Chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
D RD2015_1569 Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D RD2015_2013 molecular chaperone HscA K04044 hscA; molecular chaperone HscA
D RD2015_206 Heat shock protein 70 K04046 yegD; hypothetical chaperone protein
D RD2015_4257 molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RD2015_1568 Chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D RD2015_2012 Co-chaperone HscB-like protein K04082 hscB; molecular chaperone HscB
D RD2015_2841 Hsp33 chaperonin K04083 hslO; molecular chaperone Hsp33
D RD2015_1570 Protein GrpE K03687 GRPE; molecular chaperone GrpE
D RD2015_816 Heat shock protein Hsp20 K13993 HSP20; HSP20 family protein
D RD2015_817 Heat shock protein Hsp20 K13993 HSP20; HSP20 family protein
D RD2015_1571 RNA-binding S4 domain protein K04762 hslR; ribosome-associated heat shock protein Hsp15
D RD2015_4256 molecular chaperone GroES K04078 groES; chaperonin GroES
D RD2015_2960 Putative protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D RD2015_4019 Protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D RD2015_1206 trypsin K04771 degP; serine protease Do [EC:3.4.21.107]
D RD2015_469 TPR repeat K04771 degP; serine protease Do [EC:3.4.21.107]
D RD2015_2135 cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D RD2015_416 ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D RD2015_4193 hypothetical protein K07346 fimC; fimbrial chaperone protein
D RD2015_4107 Protein-export protein SecB K03071 secB; preprotein translocase subunit SecB
D RD2015_3199 Periplasmic protein K06006 cpxP; periplasmic protein CpxP/Spy
D RD2015_1255 membrane protein K09796 pccA; periplasmic copper chaperone A
D RD2015_4532 Peptidase S8 and S53 subtilisin kexin sedolisin K14645 K14645; serine protease [EC:3.4.21.-]
D RD2015_3889 peptidase S8 K14645 K14645; serine protease [EC:3.4.21.-]
D RD2015_1882 Peptidase S8 and S53 subtilisin kexin sedolisin K14645 K14645; serine protease [EC:3.4.21.-]
D RD2015_3250 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D RD2015_3251 cyclophilin K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D RD2015_2115 Putative peptidyl-prolyl cis-trans isomerase transmembrane protein K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D RD2015_3693 Peptidyl-prolyl cis-trans isomerase K03774 slpA; FKBP-type peptidyl-prolyl cis-trans isomerase SlpA [EC:5.2.1.8]
D RD2015_1905 Peptidyl-prolyl cis-trans isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D RD2015_2826 Peptidyl-prolyl cis-trans isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D RD2015_1378 peptidylprolyl isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D RD2015_4585 Chaperone SurA K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D RD2015_2148 Thioredoxin K03671 TXN; thioredoxin
D RD2015_4617 thioredoxin K03671 TXN; thioredoxin
D RD2015_1635 thioredoxin K03672 trxC; thioredoxin 2 [EC:1.8.1.8]
D RD2015_630 Thioredoxin domain-containing protein K05838 ybbN; putative thioredoxin
D RD2015_769 Glutaredoxin, GrxC family protein K03676 grxC; glutaredoxin 3
D RD2015_4108 Glutaredoxin 3 K03676 grxC; glutaredoxin 3
D RD2015_1065 Glutaredoxin K07390 grxD; monothiol glutaredoxin
D RD2015_4639 Thiol:disulfide interchange protein K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D RD2015_1947 Disulfide bond formation protein B K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9]
D RD2015_4073 Putative thiol:disulfide interchange protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D RD2015_583 protein-disulfide reductase K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16]
C 04131 Membrane trafficking [BR:rdp04131]
D RD2015_1485 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D RD2015_313 Membrane protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D RD2015_4531 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RD2015_4113 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D RD2015_616 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RD2015_928 Chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
D RD2015_1460 Major facilitator superfamily permease K06902 UMF1; MFS transporter, UMF1 family
C 04121 Ubiquitin system
C 03051 Proteasome [BR:rdp03051]
D RD2015_928 Chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:rdp03032]
D RD2015_3741 Ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D RD2015_2536 Putative nucleoside-triphosphatase K10742 DNA2; DNA replication ATP-dependent helicase/nuclease Dna2 [EC:5.6.2.3 3.1.-.-]
D RD2015_390 transcriptional regulator HU subunit alpha K03530 hupB; DNA-binding protein HU-beta
D RD2015_2114 Bacterial nucleoid protein Hbs K03530 hupB; DNA-binding protein HU-beta
D RD2015_1935 DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D RD2015_1418 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D RD2015_1858 Integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D RD2015_1 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D RD2015_1529 hypothetical protein K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D RD2015_1578 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D RD2015_4668 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RD2015_1846 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RD2015_3 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RD2015_2262 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D RD2015_4572 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RD2015_3154 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RD2015_2194 Exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RD2015_94 DNA polymerase III PolC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RD2015_2955 DNA polymerase III epsilon subunit DnaQ K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RD2015_3748 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RD2015_1520 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D RD2015_1673 DNA-directed DNA polymerase K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RD2015_2343 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D RD2015_2207 D12 class N6 adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D RD2015_1880 Upf31.0 K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D RD2015_3631 DnaA-like protein Hda K10763 hda; DnaA-homolog protein
D RD2015_1865 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D RD2015_4 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D RD2015_1919 DNA topoisomerase 4 subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D RD2015_1916 DNA topoisomerase 4 subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D RD2015_2047 DNA topoisomerase IB K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D RD2015_4536 DNA topoisomerase K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:rdp03036]
D RD2015_4015 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D RD2015_1579 Nucleoid protein H-NS K03746 hns; DNA-binding protein H-NS
D RD2015_51 Histone family protein nucleoid-structuring protein H-NS K03746 hns; DNA-binding protein H-NS
D RD2015_390 transcriptional regulator HU subunit alpha K03530 hupB; DNA-binding protein HU-beta
D RD2015_2114 Bacterial nucleoid protein Hbs K03530 hupB; DNA-binding protein HU-beta
D RD2015_1935 DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D RD2015_1418 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D RD2015_1858 Integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D RD2015_1 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D RD2015_2686 DNA-binding protein K04047 dps; starvation-inducible DNA-binding protein
D RD2015_151 Ferritin Dps family protein K04047 dps; starvation-inducible DNA-binding protein
D RD2015_1245 Fis family transcriptional regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D RD2015_1494 RNA-binding protein Hfq K03666 hfq; host factor-I protein
D RD2015_203 Transcriptional regulator, LysR family K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D RD2015_4429 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D RD2015_132 ArsR family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D RD2015_468 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D RD2015_674 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D RD2015_902 Transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D RD2015_2859 Transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D RD2015_3183 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D RD2015_2320 Chromosome partition protein Smc K03529 smc; chromosome segregation protein
D RD2015_1793 Chromosome segregation and condensation protein ScpA K05896 scpA; segregation and condensation protein A
D RD2015_1483 putative segregation and condensation protein B K06024 scpB; segregation and condensation protein B
D RD2015_1230 cell division protein FtsA K03590 ftsA; cell division protein FtsA
D RD2015_2837 septation ring formation regulator EzrA K05589 ftsB; cell division protein FtsB
D RD2015_1220 Penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D RD2015_1986 cell division protein FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D RD2015_1219 cell division protein FtsL K03586 ftsL; cell division protein FtsL
D RD2015_1229 Cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ
D RD2015_1225 Putative lipid II flippase FtsW K03588 ftsW; cell division protein FtsW
D RD2015_1231 Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D RD2015_1999 cell division protein ZapA K09888 zapA; cell division protein ZapA
D RD2015_2000 hypothetical protein K09892 zapB; cell division protein ZapB
D RD2015_997 Cell division protein ZapD K18778 zapD; cell division protein ZapD
D RD2015_1476 AFG1-family ATPase K06916 zapE; cell division protein ZapE
D RD2015_3169 cell wall hydrolase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D RD2015_4319 multidrug transporter K03585 acrA; membrane fusion protein, multidrug efflux system
D RD2015_2474 Secretion protein HlyD family protein K03585 acrA; membrane fusion protein, multidrug efflux system
D RD2015_1797 Septum formation inhibitor MinC K03610 minC; septum site-determining protein MinC
D RD2015_1798 cell division inhibitor MinD K03609 minD; septum site-determining protein MinD
D RD2015_1799 cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D RD2015_1280 Division inhibitor protein K05501 slmA; TetR/AcrR family transcriptional regulator
D RD2015_4712 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D RD2015_4710 rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D RD2015_4708 Rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D RD2015_1790 Putative partition-like protein K03496 parA; chromosome partitioning protein
D RD2015_112 Chromosome segregation ATPase K03496 parA; chromosome partitioning protein
D RD2015_107 ParB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RD2015_1919 DNA topoisomerase 4 subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D RD2015_1916 DNA topoisomerase 4 subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D RD2015_114 tRNA uridine 5-carboxymethylaminomethyl modification protein K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D RD2015_113 16S rRNA methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D RD2015_670 Tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D RD2015_3185 Tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D RD2015_3458 ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
C 03400 DNA repair and recombination proteins [BR:rdp03400]
D RD2015_2345 Cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D RD2015_4121 deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D RD2015_2531 Deoxyribodipyrimidine photolyase protein K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D RD2015_528 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D RD2015_4175 Putative 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D RD2015_1102 A/G-specific DNA-adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D RD2015_2001 Endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D RD2015_1282 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D RD2015_1904 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D RD2015_1552 deoxyribodipyrimidine photo-lyase K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13]
D RD2015_640 DNA polymerase-like protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D RD2015_3247 DNA-3-methyladenine glycosylase K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D RD2015_2346 Ada K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D RD2015_1101 Formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D RD2015_4719 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D RD2015_2385 Exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D RD2015_1636 single-stranded DNA exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D RD2015_2343 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D RD2015_1673 DNA-directed DNA polymerase K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RD2015_4280 Excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D RD2015_2456 Excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D RD2015_4675 UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A
D RD2015_2005 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D RD2015_2111 excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D RD2015_3133 ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RD2015_1667 DNA/RNA helicase, superfamily I K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RD2015_545 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D RD2015_546 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D RD2015_581 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D RD2015_3714 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D RD2015_3400 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D RD2015_2832 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D RD2015_3173 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D RD2015_2776 Exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D RD2015_3308 exodeoxyribonuclease VII K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D RD2015_1648 Exodeoxyribonuclease 7 small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D RD2015_1846 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RD2015_3 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RD2015_2262 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D RD2015_4572 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RD2015_3154 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RD2015_2194 Exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RD2015_94 DNA polymerase III PolC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RD2015_2955 DNA polymerase III epsilon subunit DnaQ K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RD2015_3748 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RD2015_4668 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RD2015_2207 D12 class N6 adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D RD2015_1880 Upf31.0 K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D RD2015_4705 recombinase A K03553 recA; recombination protein RecA
D RD2015_4463 ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D RD2015_4464 Holliday junction ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D RD2015_1241 Holliday junction resolvase K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D RD2015_433 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D RD2015_1526 Primosomal replication protein N K02686 priB; primosomal replication protein N
D RD2015_248 DNA repair protein radA K04485 radA; DNA repair protein RadA/Sms
D RD2015_157 Putative ATP-dependent DNA helicase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D RD2015_4013 DNA recombination protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D RD2015_3746 recombination protein RecR K06187 recR; recombination protein RecR
D RD2015_1105 DNA repair protein K03631 recN; DNA repair protein RecN (Recombination protein N)
D RD2015_2865 Putative exonuclease RdgC K03554 rdgC; recombination associated protein RdgC
D RD2015_2150 DNA helicase/exodeoxyribonuclease V, subunit A K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
D RD2015_2149 DNA helicase/exodeoxyribonuclease V, subunit B K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
D RD2015_3473 Putative ATPase K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
D RD2015_2329 DNA-binding protein K10979 ku; DNA end-binding protein Ku
D RD2015_1885 DNA repair protein K10979 ku; DNA end-binding protein Ku
D RD2015_2330 ATP-dependent DNA ligase K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D RD2015_1865 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D RD2015_4 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D RD2015_2047 DNA topoisomerase IB K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D RD2015_390 transcriptional regulator HU subunit alpha K03530 hupB; DNA-binding protein HU-beta
D RD2015_2114 Bacterial nucleoid protein Hbs K03530 hupB; DNA-binding protein HU-beta
D RD2015_1935 DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D RD2015_1245 Fis family transcriptional regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D RD2015_1418 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D RD2015_1858 Integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D RD2015_2698 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D RD2015_4670 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D RD2015_1579 Nucleoid protein H-NS K03746 hns; DNA-binding protein H-NS
D RD2015_51 Histone family protein nucleoid-structuring protein H-NS K03746 hns; DNA-binding protein H-NS
D RD2015_3727 DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D RD2015_3264 LexA family transcriptional regulator K01356 lexA; repressor LexA [EC:3.4.21.88]
D RD2015_2307 LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D RD2015_1263 RecA/RadA recombinase K14160 imuA; protein ImuA
D RD2015_1262 DNA polymerase-like protein K14161 imuB; protein ImuB
D RD2015_1261 Error-prone DNA polymerase K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
D RD2015_4704 hypothetical protein K03565 recX; regulatory protein
D RD2015_450 ATP-dependent DNA helicase Rep K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4]
D RD2015_1480 helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D RD2015_2741 DEXH box helicase, DNA ligase-associated K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
D RD2015_4309 ribonucleotide reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D RD2015_4158 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D RD2015_4157 Ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:rdp03029]
D RD2015_1296 cytochrome B K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D RD2015_2910 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D RD2015_1507 elongation factor Ts K02357 tsf; elongation factor Ts
D RD2015_538 elongation factor Tu K02358 tuf; elongation factor Tu
D RD2015_552 elongation factor Tu K02358 tuf; elongation factor Tu
D RD2015_4239 elongation factor G K02355 fusA; elongation factor G
D RD2015_551 elongation factor G K02355 fusA; elongation factor G
D RD2015_3140 elongation factor G K02355 fusA; elongation factor G
D RD2015_4423 elongation factor G K02355 fusA; elongation factor G
D RD2015_4014 GTPase Era K03595 era; GTPase
D RD2015_937 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RD2015_4570 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RD2015_3827 Aspartate--tRNA(Asp/Asn) ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RD2015_4637 Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RD2015_4714 glutamyl-tRNA amidotransferase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D RD2015_4715 glutamyl-tRNA amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D RD2015_4713 glutamyl-tRNA amidotransferase K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D RD2015_2073 Endonuclease K01173 ENDOG; endonuclease G, mitochondrial
D RD2015_4668 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RD2015_1514 membrane protein K07277 SAM50; outer membrane protein insertion porin family
D RD2015_1569 Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D RD2015_1570 Protein GrpE K03687 GRPE; molecular chaperone GrpE
D RD2015_4257 molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RD2015_4256 molecular chaperone GroES K04078 groES; chaperonin GroES
D RD2015_1568 Chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D RD2015_2009 Cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RD2015_660 hypothetical protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RD2015_2012 Co-chaperone HscB-like protein K04082 hscB; molecular chaperone HscB
D RD2015_1065 Glutaredoxin K07390 grxD; monothiol glutaredoxin
D RD2015_3458 ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D RD2015_4092 Protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D RD2015_4099 cytochrome C oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D RD2015_4093 Cytochrome oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D RD2015_4842 Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RD2015_1164 Surfeit locus 1 family protein K14998 SURF1; surfeit locus 1 family protein
D RD2015_4095 Putative transmembrane cytochrome oxidase K14998 SURF1; surfeit locus 1 family protein
D RD2015_4091 Electron transport protein sco1/senc K07152 SCO1; protein SCO1
D RD2015_928 Chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:rdp02000]
D RD2015_1851 lipid ABC transporter permease K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D RD2015_1237 ABC transporter ATP-binding protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D RD2015_1236 ABC transporter ATP-binding protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D RD2015_328 ABC transporter, HlyB/MsbA family K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D RD2015_3292 putative ATP-binding cassette sub-family B member 9-like K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D RD2015_1199 ABC transporter permease/ATP-binding protein K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
D RD2015_351 ABC transporter, ATP-binding/permease protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D RD2015_2402 ABC-type multidrug transport system, ATPase and permease component K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D RD2015_2025 ABC-transporter K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D RD2015_821 ABC transporter K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D RD2015_2419 ABC-type bacteriocin/lantibiotic exporter K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D RD2015_1804 Type I secretion system ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D RD2015_1372 ABC transporter K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D RD2015_2737 ABC transporter ATP-binding protein K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein
D RD2015_406 ABC transporter ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein
D RD2015_73 thiosulfate transporter subunit K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D RD2015_80 ABC transporter permease K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D RD2015_74 sulfate/thiosulfate transporter subunit K02046 cysU; sulfate/thiosulfate transport system permease protein
D RD2015_75 Sulfate ABC transporter permease K02047 cysW; sulfate/thiosulfate transport system permease protein
D RD2015_76 sulfate ABC transporter ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D RD2015_231 Molybdate ABC transporter, periplasmic molybdate-binding protein ModA K02020 modA; molybdate transport system substrate-binding protein
D RD2015_4077 hypothetical protein K02020 modA; molybdate transport system substrate-binding protein
D RD2015_232 Molybdate ABC transporter, permease protein K02018 modB; molybdate transport system permease protein
D RD2015_233 Molybdate ABC transporter, ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D RD2015_4405 nitrate transporter K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D RD2015_4404 Bicarbonate transport system permease protein CmpB K15577 nrtB; nitrate/nitrite transport system permease protein
D RD2015_4403 Nitrate transport ATP-binding subunits C and D K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D RD2015_70 ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component K15553 ssuA; sulfonate transport system substrate-binding protein
D RD2015_68 Binding-protein-dependent transport system inner membrane component family protein 69 K15554 ssuC; sulfonate transport system permease protein
D RD2015_69 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D RD2015_622 Spermidine/putrescine ABC transporter, ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D RD2015_626 Putative ABC transporter, periplasmic substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D RD2015_623 hypothetical protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D RD2015_624 ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D RD2015_352 ABC-type proline/glycine betaine transport system, periplasmic component K02002 proX; glycine betaine/proline transport system substrate-binding protein
D RD2015_2167 Substrate-binding region of ABC-type glycine betaine transport system K02002 proX; glycine betaine/proline transport system substrate-binding protein
D RD2015_2166 Binding-protein-dependent transport systems inner membrane component K02001 proW; glycine betaine/proline transport system permease protein
D RD2015_2165 Glycine betaine/L-proline ABC transporter, ATP-binding protein ProV K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D RD2015_596 amino acid ABC transporter permease K05845 opuC; osmoprotectant transport system substrate-binding protein
D RD2015_3933 hypothetical protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D RD2015_856 Binding-protein-dependent transport systems inner membrane component K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D RD2015_855 Taurine-transporting ATPase K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D RD2015_3663 Maltose ABC transporter periplasmic protein K10108 malE; maltose/maltodextrin transport system substrate-binding protein
D RD2015_2678 sugar ABC transporter substrate-binding protein K10108 malE; maltose/maltodextrin transport system substrate-binding protein
D RD2015_3664 Maltose ABC transporter, permease protein MalF K10109 malF; maltose/maltodextrin transport system permease protein
D RD2015_2677 hypothetical protein K10109 malF; maltose/maltodextrin transport system permease protein
D RD2015_2676 maltose transporter permease K10110 malG; maltose/maltodextrin transport system permease protein
D RD2015_3665 Maltose transporter permease K10110 malG; maltose/maltodextrin transport system permease protein
D RD2015_1534 ATPase component of ABC-type sugar transporter K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D RD2015_3662 ABC transporter K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D RD2015_2679 ABC transporter-like protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D RD2015_2814 sugar ABC transporter ATP-binding protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D RD2015_3129 ABC transporter K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D RD2015_3126 Putative ABC transporter substrate binding protein K17315 gtsA; glucose/mannose transport system substrate-binding protein
D RD2015_3127 sugar ABC transporter permease K17316 gtsB; glucose/mannose transport system permease protein
D RD2015_3128 Putative ABC transporter permease protein K17317 gtsC; glucose/mannose transport system permease protein
D RD2015_2810 Extracellular solute-binding protein, family 1 K10240 cebE; cellobiose transport system substrate-binding protein
D RD2015_2811 Binding-protein-dependent transport systems inner membrane component K10241 cebF; cellobiose transport system permease protein
D RD2015_2812 sugar ABC transporter permease K10242 cebG; cellobiose transport system permease protein
D RD2015_2567 hypothetical protein K10192 togB; oligogalacturonide transport system substrate-binding protein
D RD2015_2570 putative ABC transporter permease protein yesP K10193 togM; oligogalacturonide transport system permease protein
D RD2015_2569 Binding-protein-dependent transport system inner membrane protein K10194 togN; oligogalacturonide transport system permease protein
D RD2015_2568 sn-glycerol-3-phosphate import ATP-binding protein ugpC K10195 togA; oligogalacturonide transport system ATP-binding protein
D RD2015_2613 Sugar ABC transporter periplasmic sugar-binding protein K10546 chvE; putative multiple sugar transport system substrate-binding protein
D RD2015_2611 ABC transporter permease K10547 gguB; putative multiple sugar transport system permease protein
D RD2015_2612 ABC transporter ATP-binding protein K10548 gguA; putative multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D RD2015_3056 ABC-type sugar transport system, periplasmic component K10552 frcB; fructose transport system substrate-binding protein
D RD2015_3055 ABC transporter permease K10553 frcC; fructose transport system permease protein
D RD2015_3054 sugar ABC transporter ATP-binding protein K10554 frcA; fructose transport system ATP-binding protein
D RD2015_2622 ABC-type sugar transport system, periplasmic component protein K23508 ytfQ; galactofuranose transport system substrate-binding protein
D RD2015_2624 sugar ABC transporter permease K23509 ytfT; galactofuranose transport system permease protein
D RD2015_2625 ABC transporter permease K23509 ytfT; galactofuranose transport system permease protein
D RD2015_2623 Putative ABC transporter K10820 ytfR; galactofuranose transport system ATP-binding protein [EC:7.5.2.9]
D RD2015_322 ABC-type sugar transport system, periplasmic component K17321 glpV; glycerol transport system substrate-binding protein
D RD2015_319 Carbohydrate ABC transporter membrane protein 1, CUT1 family K17322 glpP; glycerol transport system permease protein
D RD2015_320 Carbohydrate ABC transporter membrane protein 2, CUT1 family K17323 glpQ; glycerol transport system permease protein
D RD2015_317 Carbohydrate ABC transporter ATP-binding protein, CUT1 family K17324 glpS; glycerol transport system ATP-binding protein
D RD2015_318 ABC transporter ATP-binding protein K17325 glpT; glycerol transport system ATP-binding protein
D RD2015_3975 glycerol-3-phosphate ABC transporter substrate-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D RD2015_3976 Binding-protein-dependent transport systems inner membrane component K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D RD2015_3977 L-arabinose transport system permease protein AraQ K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D RD2015_3978 sn-glycerol-3-phosphate import ATP-binding protein UgpC K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D RD2015_1531 Extracellular solute-binding protein K10227 smoE; polyol transport system substrate-binding protein
D RD2015_1532 Permease component of ABC-type sugar transporter K10228 smoF; polyol transport system permease protein
D RD2015_1533 ABC-type sugar transport system, permease component K10229 smoG; polyol transport system permease protein
D RD2015_1894 membrane protein K07335 bmpA; basic membrane protein A and related proteins
D RD2015_3957 Putative ABC-type transport system, periplasmic component/surface lipoprotein K07335 bmpA; basic membrane protein A and related proteins
D RD2015_1896 D-allose transporter subunit K23535 nupB; general nucleoside transport system permease protein
D RD2015_3959 sugar ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D RD2015_1897 sugar ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D RD2015_3958 Putative ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D RD2015_1895 Ribose import ATP-binding protein RbsA K23537 nupA; general nucleoside transport system ATP-binding protein
D RD2015_3960 ABC transporter K23537 nupA; general nucleoside transport system ATP-binding protein
D RD2015_1422 hypothetical protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D RD2015_987 ABC transporter substrate-binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D RD2015_1420 ABC-type transport system permease component USSDB6A K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D RD2015_986 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D RD2015_1421 iron ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D RD2015_985 toluene ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D RD2015_1423 hypothetical protein K18480 linN; cholesterol transport system auxiliary component
D RD2015_990 hypothetical protein K07122 mlaB; phospholipid transport system transporter-binding protein
D RD2015_2138 Phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D RD2015_614 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D RD2015_2139 Phosphate transport system permease protein K02037 pstC; phosphate transport system permease protein
D RD2015_2140 Phosphate ABC transporter, permease protein PstA K02038 pstA; phosphate transport system permease protein
D RD2015_2141 Phosphate import ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D RD2015_3450 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D RD2015_3448 Phosphate-import permease protein PhnE K02042 phnE; phosphonate transport system permease protein
D RD2015_3449 phosphonate ABC transporter K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D RD2015_1201 Periplasmic component of amino acid ABC-type transporter/signal transduction system K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D RD2015_1989 ABC transporter K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D RD2015_1203 amino acid ABC transporter permease K10002 gltK; glutamate/aspartate transport system permease protein
D RD2015_1202 Putative ABC transporter protein glutamate/aspartate transmembrane subunit K10003 gltJ; glutamate/aspartate transport system permease protein
D RD2015_1204 Putative polar amino acid transport system ATP-binding protein K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D RD2015_767 cysteine ABC transporter substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D RD2015_766 Amino acid ABC transporter permease K10009 tcyB; L-cystine transport system permease protein
D RD2015_1842 Putative amino acid binding protein K10022 aotJ; arginine/ornithine transport system substrate-binding protein
D RD2015_1840 Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine K10023 aotM; arginine/ornithine transport system permease protein
D RD2015_1841 Arginine/ornithine transport system permease protein K10024 aotQ; arginine/ornithine transport system permease protein
D RD2015_1838 histidine ABC transporter ATP-binding protein K10025 aotP; arginine/ornithine transport system ATP-binding protein [EC:7.4.2.1]
D RD2015_4521 amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RD2015_3426 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RD2015_2016 ABC-type branched-chain amino acid transport system, periplasmic component K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RD2015_1384 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RD2015_2263 Putative high-affinity branched-chain amino acid ABC transporter substrate binding protein LivK K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RD2015_142 Leucine ABC transporter subunit substrate-binding protein LivK K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RD2015_4520 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D RD2015_1385 Branched-chain amino acid ABC-type transport system, permease component K01997 livH; branched-chain amino acid transport system permease protein
D RD2015_592 Inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D RD2015_141 LIV-I protein H K01997 livH; branched-chain amino acid transport system permease protein
D RD2015_2801 LIV-I protein H K01997 livH; branched-chain amino acid transport system permease protein
D RD2015_4519 ABC transporter K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RD2015_593 ABC transporter-related protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RD2015_140 Leucine/isoleucine/valine transporter permease subunit K01998 livM; branched-chain amino acid transport system permease protein
D RD2015_2800 ABC transporter ATP-binding protein K01998 livM; branched-chain amino acid transport system permease protein
D RD2015_1386 ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D RD2015_1387 branched-chain amino acid ABC transporter substrate-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RD2015_144 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RD2015_2799 Putative high-affinity branched-chain amino acid ABC transporter ATP binding protein LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RD2015_594 ABC transporter-related protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RD2015_4518 amino acid ABC transporter ATPase K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RD2015_143 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RD2015_2798 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RD2015_1388 mannosyltransferase K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RD2015_4506 methionine ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D RD2015_4505 metal ABC transporter permease K02072 metI; D-methionine transport system permease protein
D RD2015_4504 Methionine import ATP-binding protein MetN K02071 metN; D-methionine transport system ATP-binding protein
D RD2015_3777 branched-chain amino acid ABC transporter substrate-binding protein K11959 urtA; urea transport system substrate-binding protein
D RD2015_3778 urea ABC transporter permease K11960 urtB; urea transport system permease protein
D RD2015_3779 amino acid ABC transporter permease K11961 urtC; urea transport system permease protein
D RD2015_3780 ABC transporter-like protein K11962 urtD; urea transport system ATP-binding protein
D RD2015_3781 Urea ABC transporter, ATP-binding protein UrtE K11963 urtE; urea transport system ATP-binding protein
D RD2015_1247 Extracellular solute-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D RD2015_3640 hypothetical protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D RD2015_217 amino acid ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D RD2015_448 hypothetical protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D RD2015_1657 Periplasmic component of amino acid ABC-type transporter/signal transduction system K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D RD2015_2969 hypothetical protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D RD2015_218 polar amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D RD2015_219 Amino acid ABC transporter, permease protein K02029 ABC.PA.P; polar amino acid transport system permease protein
D RD2015_220 Phosphate ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D RD2015_278 Extracellular solute-binding protein family 5 K12368 dppA; dipeptide transport system substrate-binding protein
D RD2015_282 peptide ABC transporter permease K12369 dppB; dipeptide transport system permease protein
D RD2015_281 peptide transporter K12370 dppC; dipeptide transport system permease protein
D RD2015_280 peptide ABC transporter ATP-binding protein K12371 dppD; dipeptide transport system ATP-binding protein
D RD2015_279 peptide ABC transporter ATP-binding protein K12372 dppF; dipeptide transport system ATP-binding protein
D RD2015_3204 ABC-type dipeptide transport system, periplasmic component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RD2015_2541 Extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RD2015_299 Putative binding protein yliB K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RD2015_1470 ABC-type dipeptide transport system, periplasmic component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RD2015_4790 Dipeptide-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RD2015_4792 Putative binding protein component of ABC transporter K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RD2015_3325 ABC transporter permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RD2015_960 ABC transporter permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RD2015_4793 IM pore protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RD2015_2540 Binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RD2015_295 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RD2015_3324 Binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RD2015_962 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RD2015_2539 Binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RD2015_296 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RD2015_4794 ABC transporter permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RD2015_3323 ATPase component ABC-type dipeptide/oligopeptide/nickel transport system K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RD2015_4795 ABC type ATPase K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RD2015_2538 ABC transporter-related protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RD2015_297 ABC transporter K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RD2015_963 methionine ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RD2015_964 ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D RD2015_3989 ABC transporter substrate-binding protein K25132 hmuT; heme transport system substrate-binding protein
D RD2015_3990 Transport system permease protein K25133 hmuU; heme transport system permease protein
D RD2015_3991 ABC transporter K10834 hmuV; heme transport system ATP-binding protein [EC:7.6.2.5]
D RD2015_1091 ABC transporter substrate-binding protein K25034 btuF; cobalamin transport system substrate-binding protein
D RD2015_1090 Transport system permease K25027 btuC; cobalamin transport system permease protein
D RD2015_1089 ABC transporter-like protein K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8]
D RD2015_742 Cobalt transport protein CbiN K02009 cbiN; cobalt/nickel transport protein
D RD2015_741 cobalt transporter K02008 cbiQ; cobalt/nickel transport system permease protein
D RD2015_743 cobalamin biosynthesis protein CbiM K02007 cbiM; cobalt/nickel transport system permease protein
D RD2015_740 cobalt ABC transporter ATP-binding protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D RD2015_2260 permease K07091 lptF; lipopolysaccharide export system permease protein
D RD2015_2259 Putative ABC transporter permease K11720 lptG; lipopolysaccharide export system permease protein
D RD2015_4641 Lipopolysaccharide export system ATP-binding protein LptB K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D RD2015_119 sodium ABC transporter permease K09696 natB; sodium transport system permease protein
D RD2015_120 ABC transporter ATP-binding protein K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D RD2015_1674 cell division protein FtsX K09808 lolC_E; lipoprotein-releasing system permease protein
D RD2015_1675 Lipoprotein-releasing system ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D RD2015_4486 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D RD2015_889 metal-dependent hydrolase K01992 ABC-2.P; ABC-2 type transport system permease protein
D RD2015_4487 hypothetical protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RD2015_888 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RD2015_4748 Putative ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RD2015_3177 ABC-type transport system, involved in lipoprotein release, permease component K02004 ABC.CD.P; putative ABC transport system permease protein
D RD2015_3237 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D RD2015_3238 ABC transporter ATP-binding protein K02004 ABC.CD.P; putative ABC transport system permease protein
D RD2015_1702 Putative transmembrane protein K02004 ABC.CD.P; putative ABC transport system permease protein
D RD2015_1713 Membrane protein K02004 ABC.CD.P; putative ABC transport system permease protein
D RD2015_1714 Membrane protein K02004 ABC.CD.P; putative ABC transport system permease protein
D RD2015_3176 Lipoprotein-releasing system ATP-binding protein LolD K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D RD2015_3240 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D RD2015_1376 ABC transporter-related protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D RD2015_1712 ABC transporter K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D RD2015_1796 bile acid:sodium symporter K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D RD2015_3195 Putative efflux protein, MATE family K26939 norM; MATE family, multidrug efflux pump
D RD2015_293 Putative Na+driven efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D RD2015_3808 Glucose/galactose transporter K02429 fucP; MFS transporter, FHS family, L-fucose permease
D RD2015_4078 General substrate transporter K03288 citA; MFS transporter, MHS family, citrate/tricarballylate:H+ symporter
D RD2015_4800 alpha-ketoglutarate transporter K02625 pcaT; MFS transporter, MHS family, dicarboxylic acid transporter PcaT
D RD2015_4177 D-galactonate transporter K03535 gudP; MFS transporter, ACS family, glucarate transporter
D RD2015_254 hypothetical protein K08227 lplT; MFS transporter, LPLT family, lysophospholipid transporter
D RD2015_4144 major facilitator transporter K08227 lplT; MFS transporter, LPLT family, lysophospholipid transporter
D RD2015_1009 protein pucC K08226 pucC; MFS transporter, BCD family, chlorophyll transporter
D RD2015_1019 hypothetical protein K08226 pucC; MFS transporter, BCD family, chlorophyll transporter
D RD2015_287 Putative membrane protein K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D RD2015_2614 Major facilitator transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D RD2015_3357 Tetracycline-efflux transporter K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein
D RD2015_1212 Sulfonamide resistance protein K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D RD2015_1699 Putative efflux protein MFS family protein K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D RD2015_379 MFS sugar transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D RD2015_2445 MFS transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D RD2015_694 General substrate transporter:Major facilitator superfamily K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D RD2015_2406 Drug resistance transporter, EmrB/QacA subfamily K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D RD2015_1828 DSBA oxidoreductase K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D RD2015_2438 Fosmidomycin resistance protein Fsr K08223 fsr; MFS transporter, FSR family, fosmidomycin resistance protein
D RD2015_3420 Putative transmembrane transport protein K08223 fsr; MFS transporter, FSR family, fosmidomycin resistance protein
D RD2015_4522 MFS transporter K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein
D RD2015_1460 Major facilitator superfamily permease K06902 UMF1; MFS transporter, UMF1 family
D RD2015_4434 phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D RD2015_4436 phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D RD2015_4437 PTS fructose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D RD2015_4563 PTS IIA-like nitrogen-regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D RD2015_394 Ammonium transporter K03320 amt; ammonium transporter, Amt family
D RD2015_645 Putative GSH-dependent dehydroascorbate reductase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RD2015_4201 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RD2015_412 Glutathione S-transferase domain protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RD2015_441 Glutathione S-transferase domain-containing protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RD2015_4751 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RD2015_4601 Glutathione S transferase domain containing protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RD2015_302 Glutathione S-transferase-like protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RD2015_122 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RD2015_653 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RD2015_1298 glutathione S-transferase K03599 sspA; stringent starvation protein A
D RD2015_2287 Magnesium chelatase subunit D K07114 yfbK; Ca-activated chloride channel homolog
D RD2015_2127 FtsH-interacting integral membrane protein K19416 yccA; modulator of FtsH protease
D RD2015_63 membrane protein K19416 yccA; modulator of FtsH protease
D RD2015_1294 Large-conductance mechanosensitive channel K03282 mscL; large conductance mechanosensitive channel
D RD2015_4672 Mechanosensitive ion channel family protein K05802 mscK; potassium-dependent mechanosensitive channel
D RD2015_1747 Chemotaxis signal transduction protein CheY K02556 motA; chemotaxis protein MotA
D RD2015_3520 Chemotaxis protein LafT K02556 motA; chemotaxis protein MotA
D RD2015_1748 Outer membrane chemotaxis MotB protein K02557 motB; chemotaxis protein MotB
D RD2015_3519 Chemotaxis protein LafU K02557 motB; chemotaxis protein MotB
D RD2015_4568 flagellar motor protein MotA K03561 exbB; biopolymer transport protein ExbB
D RD2015_3309 Putative biopolymer transport exbB-like transmembrane protein K03561 exbB; biopolymer transport protein ExbB
D RD2015_3319 Biopolymer transport protein ExbB K03561 exbB; biopolymer transport protein ExbB
D RD2015_3310 Biopolymer transport protein ExbD K03559 exbD; biopolymer transport protein ExbD
D RD2015_3317 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD
D RD2015_3318 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD
D RD2015_2353 protein tolQ K03562 tolQ; biopolymer transport protein TolQ
D RD2015_4569 Biopolymer transport protein K03560 tolR; biopolymer transport protein TolR
D RD2015_2352 biopolymer transporter ExbD K03560 tolR; biopolymer transport protein TolR
D RD2015_4561 Magnesium and cobalt transport protein CorA K03284 corA; magnesium transporter
D RD2015_4458 Magnesium transport protein CorA K03284 corA; magnesium transporter
D RD2015_4138 magnesium transporter CorA K16074 zntB; zinc transporter
D RD2015_1597 CBS domain protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D RD2015_2333 membrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D RD2015_3125 hypothetical protein K02024 lamB; maltoporin
D RD2015_1866 OmpA/MotB domain protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D RD2015_4607 hypothetical protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D RD2015_2527 membrane protein K06076 fadL; long-chain fatty acid transport protein
D RD2015_4192 hypothetical protein K07347 fimD; outer membrane usher protein
D RD2015_635 Esterase, SGNH hydrolase-type domain protein K12686 apeE; outer membrane lipase/esterase
D RD2015_4685 TonB-dependent receptor K16090 fiu; catecholate siderophore receptor
D RD2015_4729 Putative TonB-dependent vitamin B12 receptor K16092 btuB; vitamin B12 transporter
D RD2015_1093 Outer membrane cobalamin receptor protein K16092 btuB; vitamin B12 transporter
D RD2015_1878 Putative TonB-dependent receptor K16088 TC.FEV.OM1; outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid
D RD2015_1410 hypothetical protein K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins
D RD2015_689 hypothetical protein K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins
D RD2015_3955 Outer membrane receptor for ferrienterochelin and colicins K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins
D RD2015_3987 TonB-dependent receptor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D RD2015_2158 TonB-dependent outer membrane receptor protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D RD2015_628 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D RD2015_3322 hypothetical protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D RD2015_1555 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D RD2015_4476 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D RD2015_4718 Putative TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D RD2015_2888 Putative TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D RD2015_4304 Putative TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D RD2015_713 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D RD2015_3920 Fe(III)-pyochelin receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D RD2015_272 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D RD2015_537 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D RD2015_2254 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D RD2015_2542 membrane protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D RD2015_4624 TonB-dependent Receptor Plug domain protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D RD2015_4625 TonB-dependent Receptor Plug domain protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D RD2015_4629 TonB-dependent Receptor Plug domain protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D RD2015_4631 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D RD2015_285 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D RD2015_2079 iron transporter K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D RD2015_2377 Putative TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D RD2015_3674 TonB-denpendent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D RD2015_2511 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D RD2015_2671 hypothetical protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D RD2015_1131 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D RD2015_4739 Outer membrane efflux protein K15725 czcC; outer membrane protein, heavy metal efflux system
D RD2015_3239 type I secretion protein TolC K12340 tolC; outer membrane protein
D RD2015_2104 Outer membrane protein TolC K12340 tolC; outer membrane protein
D RD2015_2420 hypothetical protein K12543 lapE; outer membrane protein, adhesin transport system
D RD2015_1806 Outer membrane protein K12543 lapE; outer membrane protein, adhesin transport system
D RD2015_812 RND efflux system, outer membrane lipoprotein, NodT K18903 oprC; outer membrane protein, multidrug efflux system
D RD2015_4317 RND efflux system outer membrane lipoprotein K18139 oprM; outer membrane protein, multidrug efflux system
D RD2015_4369 Type I secretion outer membrane protein K18139 oprM; outer membrane protein, multidrug efflux system
D RD2015_2883 NodT family efflux transporter, outer membrane factor (OMF) lipoprotein K18139 oprM; outer membrane protein, multidrug efflux system
D RD2015_1809 Polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D RD2015_3885 Polysaccharide export protein Wza K01991 wza; polysaccharide biosynthesis/export protein
D RD2015_1514 membrane protein K07277 SAM50; outer membrane protein insertion porin family
D RD2015_1492 membrane protein K17713 bamB; outer membrane protein assembly factor BamB
D RD2015_1909 NlpB/DapX family lipoprotein K07287 bamC; outer membrane protein assembly factor BamC
D RD2015_1481 competence protein ComL K05807 bamD; outer membrane protein assembly factor BamD
D RD2015_4566 Outer membrane protein assembly factor BamE K06186 bamE; outer membrane protein assembly factor BamE
D RD2015_3791 hypothetical protein K07278 tamA; translocation and assembly module TamA
D RD2015_3792 hypothetical protein K09800 tamB; translocation and assembly module TamB
D RD2015_4640 Putative lipopolysaccharide transport protein A LptA K09774 lptA; lipopolysaccharide export system protein LptA
D RD2015_4826 hypothetical protein K11719 lptC; lipopolysaccharide export system protein LptC
D RD2015_4586 LPS-assembly protein LptD K04744 lptD; LPS-assembly protein
D RD2015_4571 LPS-assembly lipoprotein LptE K03643 lptE; LPS-assembly lipoprotein
D RD2015_4387 magnesium transporter K06189 corC; hemolysin (HlyC) family protein
D RD2015_1642 Putative divalent heavy-metal cations transporter K16267 zipB; zinc and cadmium transporter
D RD2015_4737 Heavy metal efflux pump, CzcA family K15726 czcA; heavy metal efflux system protein
D RD2015_811 AcrB/AcrD/AcrF family protein K18902 bpeF; multidrug efflux pump
D RD2015_1452 Putative transmembrane drug efflux protein K18303 mexK; multidrug efflux pump
D RD2015_4318 acriflavine resistance protein B K18138 acrB; multidrug efflux pump
D RD2015_2499 Acriflavine resistance protein B K18146 adeB; multidrug efflux pump
D RD2015_4444 Cation/multidrug efflux pump K07788 mdtB; multidrug efflux pump
D RD2015_4445 AcrB/AcrD/AcrF family membrane protein K07789 mdtC; multidrug efflux pump
D RD2015_1622 SMR family protein K11741 sugE; quaternary ammonium compound-resistance protein SugE
D RD2015_492 EamA-like transporter family K15268 eamA; O-acetylserine/cysteine efflux transporter
D RD2015_1661 membrane protein K05786 rarD; chloramphenicol-sensitive protein RarD
D RD2015_2501 Gluconate transporter K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D RD2015_4410 ionic transporter y4hA K07300 chaA; Ca2+:H+ antiporter
D RD2015_1524 sodium:solute symporter K14393 actP; cation/acetate symporter
D RD2015_1197 C4-dicarboxylate transporter K11103 dctA; aerobic C4-dicarboxylate transport protein
D RD2015_1978 sodium:proton antiporter K03313 nhaA; Na+:H+ antiporter, NhaA family
D RD2015_4203 Na+/H+ antiporter K24163 nhaK; monovalent cation/hydrogen antiporter
D RD2015_1788 Transporter, monovalent cation:proton antiporter-2 (CPA2) family K11745 kefC; glutathione-regulated potassium-efflux system protein KefC
D RD2015_1789 Putative NADPH-quinone reductase K11746 kefF; glutathione-regulated potassium-efflux system ancillary protein KefF
D RD2015_4835 potassium transporter K03455 KEA1_2_3; K+:H+ antiporter
D RD2015_3159 Sodium/hydrogen exchanger K26735 KEA4_5_6; K+:H+ antiporter
D RD2015_3657 Transporter, CPA2 family K26731 CHX; K+:H+ antiporter
D RD2015_4796 pyrimidine permease K09016 rutG; putative pyrimidine permease RutG
D RD2015_400 membrane protein K05782 benE; benzoate membrane transport protein
D RD2015_4229 Voltage gated chloride channel family protein K03281 clcA; chloride channel protein, CIC family
D RD2015_184 Chloride channel core K03281 clcA; chloride channel protein, CIC family
D RD2015_518 ChrA protein K07240 chrA; chromate transporter
D RD2015_4799 Sulfate transporter permease K03321 TC.SULP; sulfate permease, SulP family
D RD2015_517 divalent metal cation transporter MntH K03322 mntH; manganese transport protein
D RD2015_799 C4-dicarboxylate ABC transporter K11688 dctP; C4-dicarboxylate-binding protein DctP
D RD2015_798 C4-dicarboxylate ABC transporter substrate-binding protein K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit
D RD2015_797 putative C4-dicarboxylate transporter large subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D RD2015_2971 L-dehydroascorbate transporter large permease subunit K21393 yiaN; TRAP-type transport system large permease protein
D RD2015_2972 C4-dicarboxylate ABC transporter permease K21394 yiaM; TRAP-type transport system small permease protein
D RD2015_2970 ABC transporter substrate-binding protein K21395 yiaO; TRAP-type transport system periplasmic protein
D RD2015_3633 membrane protein K03980 murJ; putative peptidoglycan lipid II flippase
D RD2015_4541 Putative permease K13936 mdcF; malonate transporter and related proteins
D RD2015_399 putative potassium transport system protein kup K03549 kup; KUP system potassium uptake protein
D RD2015_3209 putative potassium transport system protein kup K03549 kup; KUP system potassium uptake protein
D RD2015_204 Putative transmembrane protein K06895 lysE; L-lysine exporter family protein LysE/ArgO
D RD2015_249 threonine transporter RhtB K05834 rhtB; homoserine/homoserine lactone efflux protein
D RD2015_2535 Amino acid transporter LysE K05834 rhtB; homoserine/homoserine lactone efflux protein
D RD2015_612 Putative membrane protein K26606 azlD; branched chain amino acid efflux pump
D RD2015_1574 tripartite tricarboxylate transporter TctA K07793 tctA; putative tricarboxylic transport membrane protein
D RD2015_1682 Tripartite tricarboxylate transporter TctA family protein K07793 tctA; putative tricarboxylic transport membrane protein
D RD2015_3765 hypothetical protein K07793 tctA; putative tricarboxylic transport membrane protein
D RD2015_1573 tripartite tricarboxylate transporter TctB K07794 tctB; putative tricarboxylic transport membrane protein
D RD2015_1681 Putative membrane protein K07794 tctB; putative tricarboxylic transport membrane protein
D RD2015_1572 C4-dicarboxylate ABC transporter substrate-binding protein K07795 tctC; putative tricarboxylic transport membrane protein
D RD2015_359 Membrane protein, MarC family K05595 marC; multiple antibiotic resistance protein
D RD2015_1225 Putative lipid II flippase FtsW K03588 ftsW; cell division protein FtsW
D RD2015_313 Membrane protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D RD2015_916 hypothetical protein K03832 tonB; periplasmic protein TonB
D RD2015_4361 hypothetical protein K03832 tonB; periplasmic protein TonB
D RD2015_3320 hypothetical protein K03832 tonB; periplasmic protein TonB
D RD2015_4146 energy transducer TonB K03832 tonB; periplasmic protein TonB
D RD2015_3461 peptidoglycan-binding protein K03640 pal; peptidoglycan-associated lipoprotein
D RD2015_1477 hypothetical protein K03646 tolA; colicin import membrane protein
D RD2015_2351 Protein TolA K03646 tolA; colicin import membrane protein
D RD2015_2645 hypothetical protein K03646 tolA; colicin import membrane protein
D RD2015_3462 translocation protein TolB K03641 tolB; TolB protein
D RD2015_1425 pyrophosphatase K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1]
D RD2015_3345 Malonate decarboxylase, alpha subunit K13929 mdcA; malonate decarboxylase alpha subunit [EC:2.3.1.187]
D RD2015_3344 Malonate decarboxylase acyl carrier protein K13931 mdcC; malonate decarboxylase delta subunit
D RD2015_2405 hemolysin D K03543 emrA; membrane fusion protein, multidrug efflux system
D RD2015_1829 multidrug ABC transporter permease K03543 emrA; membrane fusion protein, multidrug efflux system
D RD2015_4738 cytochrome C peroxidase K15727 czcB; membrane fusion protein, heavy metal efflux system
D RD2015_2418 HlyD family secretion protein K12542 lapC; membrane fusion protein, adhesin transport system
D RD2015_1805 Type I secretion membrane fusion protein, HlyD family K12542 lapC; membrane fusion protein, adhesin transport system
D RD2015_327 hypothetical protein K13408 cvaA; membrane fusion protein
D RD2015_3290 hypothetical protein K13408 cvaA; membrane fusion protein
D RD2015_810 Efflux transporter, RND family, MFP subunit K18901 bpeE; membrane fusion protein, multidrug efflux system
D RD2015_1451 RND family efflux transporter MFP subunit K18302 mexJ; membrane fusion protein, multidrug efflux system
D RD2015_511 hypothetical protein K21135 mexM; membrane fusion protein, multidrug efflux system
D RD2015_4319 multidrug transporter K03585 acrA; membrane fusion protein, multidrug efflux system
D RD2015_2474 Secretion protein HlyD family protein K03585 acrA; membrane fusion protein, multidrug efflux system
D RD2015_2500 Efflux transporter K18145 adeA; membrane fusion protein, multidrug efflux system
D RD2015_4443 HlyD family secretion protein K07799 mdtA; membrane fusion protein, multidrug efflux system
D RD2015_1373 Efflux transporter, RND family, MFP subunit K13888 macA; membrane fusion protein, macrolide-specific efflux system
D RD2015_1811 Non-specific protein-tyrosine kinase K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D RD2015_3883 tyrosine protein kinase K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D RD2015_1810 Polysaccharide chain length determinant protein, PEP-CTERM locus subfamily K25590 epsF; protein tyrosine kinase modulator
D RD2015_3884 Chain length determinant protein EpsF K25590 epsF; protein tyrosine kinase modulator
D RD2015_4334 hypothetical protein K03811 pnuC; nicotinamide mononucleotide transporter
D RD2015_2838 Nicotinamide mononucleotide transporter PnuC K03811 pnuC; nicotinamide mononucleotide transporter
D RD2015_1893 Putative ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A
D RD2015_1892 iron transporter FeoB K04759 feoB; ferrous iron transport protein B
D RD2015_2738 Putative Mg(2+) transporter K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
D RD2015_1323 5-hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
D RD2015_2696 Hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
D RD2015_370 MltA-interacting protein MipA K07274 mipA; MipA family protein
D RD2015_704 hypothetical protein K07274 mipA; MipA family protein
C 02044 Secretion system [BR:rdp02044]
D RD2015_3239 type I secretion protein TolC K12340 tolC; outer membrane protein
D RD2015_2104 Outer membrane protein TolC K12340 tolC; outer membrane protein
D RD2015_2419 ABC-type bacteriocin/lantibiotic exporter K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D RD2015_1804 Type I secretion system ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D RD2015_2418 HlyD family secretion protein K12542 lapC; membrane fusion protein, adhesin transport system
D RD2015_1805 Type I secretion membrane fusion protein, HlyD family K12542 lapC; membrane fusion protein, adhesin transport system
D RD2015_2420 hypothetical protein K12543 lapE; outer membrane protein, adhesin transport system
D RD2015_1806 Outer membrane protein K12543 lapE; outer membrane protein, adhesin transport system
D RD2015_327 hypothetical protein K13408 cvaA; membrane fusion protein
D RD2015_3290 hypothetical protein K13408 cvaA; membrane fusion protein
D RD2015_328 ABC transporter, HlyB/MsbA family K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D RD2015_3292 putative ATP-binding cassette sub-family B member 9-like K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D RD2015_1813 Putative nucleoside-triphosphatase K02450 gspA; general secretion pathway protein A
D RD2015_953 hypothetical protein K02452 gspC; general secretion pathway protein C
D RD2015_944 General secretion pathway protein D K02453 gspD; general secretion pathway protein D
D RD2015_2392 General secretion pathway protein D K02453 gspD; general secretion pathway protein D
D RD2015_943 general secretion pathway protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D RD2015_1680 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D RD2015_942 general secretion pathway protein F K02455 gspF; general secretion pathway protein F
D RD2015_952 general secretion pathway protein GspG K02456 gspG; general secretion pathway protein G
D RD2015_951 general secretion pathway protein GspH K02457 gspH; general secretion pathway protein H
D RD2015_950 general secretion pathway protein GspI K02458 gspI; general secretion pathway protein I
D RD2015_949 general secretion pathway protein GspJ K02459 gspJ; general secretion pathway protein J
D RD2015_948 Type II secretion system protein K K02460 gspK; general secretion pathway protein K
D RD2015_947 Putative general secretion pathway protein L GspL K02461 gspL; general secretion pathway protein L
D RD2015_946 general secretion pathway protein GspM K02462 gspM; general secretion pathway protein M
D RD2015_945 Putative general secretory pathway N transmembrane protein K02463 gspN; general secretion pathway protein N
D RD2015_999 peptidase A24 K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D RD2015_4694 Fimbrial protein ecpC K02650 pilA; type IV pilus assembly protein PilA
D RD2015_4695 methylation K02650 pilA; type IV pilus assembly protein PilA
D RD2015_984 fimbrial assembly protein K02650 pilA; type IV pilus assembly protein PilA
D RD2015_1001 Type II traffic warden ATPase K02652 pilB; type IV pilus assembly protein PilB
D RD2015_1000 type II secretion system protein F K02653 pilC; type IV pilus assembly protein PilC
D RD2015_2363 hypothetical protein K02655 pilE; type IV pilus assembly protein PilE
D RD2015_1487 Type IV pilus biogenesis/stability protein PilW K02656 pilF; type IV pilus assembly protein PilF
D RD2015_4130 pilus response regulator PilG K02657 pilG; twitching motility two-component system response regulator PilG
D RD2015_4129 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain K02658 pilH; twitching motility two-component system response regulator PilH
D RD2015_4128 chemotaxis protein CheW K02659 pilI; twitching motility protein PilI
D RD2015_4127 Methyl-accepting chemotaxis sensory transducer K02660 pilJ; twitching motility protein PilJ
D RD2015_968 pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
D RD2015_969 Fimbrial assembly protein K02663 pilN; type IV pilus assembly protein PilN
D RD2015_970 pilus assembly protein PilO K02664 pilO; type IV pilus assembly protein PilO
D RD2015_971 pilus assembly protein PilP K02665 pilP; type IV pilus assembly protein PilP
D RD2015_972 secretin K02666 pilQ; type IV pilus assembly protein PilQ
D RD2015_919 twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D RD2015_920 twitching motility protein PilT K02670 pilU; twitching motility protein PilU
D RD2015_2314 Twitching motility protein PilU PilT like K02670 pilU; twitching motility protein PilU
D RD2015_982 hypothetical protein K02671 pilV; type IV pilus assembly protein PilV
D RD2015_981 hypothetical protein K02672 pilW; type IV pilus assembly protein PilW
D RD2015_979 Pilus tip-associated protein K02674 pilY1; type IV pilus assembly protein PilY1
D RD2015_3153 pilus assembly protein PilZ K02676 pilZ; type IV pilus assembly protein PilZ
D RD2015_983 hypothetical protein K08084 fimT; type IV fimbrial biogenesis protein FimT
D RD2015_2295 FimV N-terminal domain containing protein K08086 fimV; pilus assembly protein FimV
D RD2015_2255 hypothetical protein K08086 fimV; pilus assembly protein FimV
D RD2015_3740 Deoxycytidylate deaminase-like protein K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D RD2015_1958 Putative transporter DNA uptake transmembrane protein K02238 comEC; competence protein ComEC
D RD2015_3116 Type III secretion outer membrane pore, YscC/HrcC family K03219 yscC; type III secretion protein C
D RD2015_3845 Type III secretion protein K03219 yscC; type III secretion protein C
D RD2015_3115 hypothetical protein K03220 yscD; type III secretion protein D
D RD2015_3835 type III secretion protein K03222 yscJ; type III secretion protein J
D RD2015_3107 Type III secretion apparatus lipoprotein, YscJ/HrcJ family K03222 yscJ; type III secretion protein J
D RD2015_3105 Type III secretion apparatus protein SctL K03223 yscL; type III secretion protein L
D RD2015_3841 Type III secretion ATP synthase protein K03224 yscN; ATP synthase in type III secretion protein N [EC:7.4.2.8]
D RD2015_3104 Type III secretion apparatus H+-transporting two-sector ATPase K03224 yscN; ATP synthase in type III secretion protein N [EC:7.4.2.8]
D RD2015_3848 hypothetical protein K03225 yscQ; type III secretion protein Q
D RD2015_3097 hypothetical protein K03225 yscQ; type III secretion protein Q
D RD2015_3849 Type III secretion apparatus protein K03226 yscR; type III secretion protein R
D RD2015_3098 flagellar biosynthesis protein FliP K03226 yscR; type III secretion protein R
D RD2015_3850 Type III secretion, HrpO family protein K03227 yscS; type III secretion protein S
D RD2015_3099 Type III secretion protein, HrpO family K03227 yscS; type III secretion protein S
D RD2015_3838 hypothetical protein K03228 yscT; type III secretion protein T
D RD2015_3102 Type III secretion protein SpaR/YscT/HrcT K03228 yscT; type III secretion protein T
D RD2015_3839 hypothetical protein K03229 yscU; type III secretion protein U
D RD2015_3094 Type III secretion protein, YscU/HrpY family K03229 yscU; type III secretion protein U
D RD2015_3843 Harpin secretion protein hrpI K03230 yscV; type III secretion protein V
D RD2015_3095 Type III secretion protein, HrcV family K03230 yscV; type III secretion protein V
D RD2015_3109 HrpB1 protein K18373 hrpB1; type III secretion protein HrpB1
D RD2015_3108 hypothetical protein K18374 hrpB2; type III secretion inner rod protein HrpB2
D RD2015_3096 hypothetical protein K18381 hpaC; type III secretion control protein HpaP
D RD2015_1752 Flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D RD2015_3540 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D RD2015_1751 Flagellar biosynthesis protein K02401 flhB; flagellar biosynthesis protein FlhB
D RD2015_3539 flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D RD2015_3531 Flagellar M-ring protein K02409 fliF; flagellar M-ring protein FliF
D RD2015_1730 Flagellar M-ring protein K02409 fliF; flagellar M-ring protein FliF
D RD2015_3529 Flagellar assembly FliH family protein K02411 fliH; flagellar assembly protein FliH
D RD2015_1728 Flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D RD2015_3528 ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D RD2015_1727 ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D RD2015_3535 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D RD2015_1722 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D RD2015_1721 Flagellar biogenesis protein K02418 fliO; flagellar protein FliO/FliZ
D RD2015_3536 Flagellar biosynthesis protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D RD2015_1720 Flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D RD2015_3537 flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D RD2015_1719 Flagellar biosynthesis protein K02420 fliQ; flagellar biosynthesis protein FliQ
D RD2015_3538 flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D RD2015_1718 Flagellar biosynthetic protein fliR K02421 fliR; flagellar biosynthesis protein FliR
D RD2015_4073 Putative thiol:disulfide interchange protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D RD2015_635 Esterase, SGNH hydrolase-type domain protein K12686 apeE; outer membrane lipase/esterase
D RD2015_2636 Type VI secretion protein IcmF K11891 impL; type VI secretion system protein ImpL
D RD2015_2635 Type IV / VI secretion system protein, DotU family K11892 impK; type VI secretion system protein ImpK
D RD2015_2634 Type VI secretion protein, VC_A0114 family K11893 impJ; type VI secretion system protein ImpJ
D RD2015_2659 type VI secretion protein K11895 impH; type VI secretion system protein ImpH
D RD2015_2660 Type VI secretion protein, VC_A0110 family K11896 impG; type VI secretion system protein ImpG
D RD2015_2661 Type VI secretion system lysozyme-related protein K11897 impF; type VI secretion system protein ImpF
D RD2015_2665 Type VI secretion protein, EvpB/VC_A0108 family K11900 impC; type VI secretion system protein ImpC
D RD2015_2666 Putative cytoplasmic protein,SciH K11901 impB; type VI secretion system protein ImpB
D RD2015_2667 Type VI secretion-associated protein, ImpA family K11902 impA; type VI secretion system protein ImpA
D RD2015_2663 hypothetical protein K11903 hcp; type VI secretion system secreted protein Hcp
D RD2015_2664 type VI secretion protein K11903 hcp; type VI secretion system secreted protein Hcp
D RD2015_866 VgrG protein K11904 vgrG; type VI secretion system secreted protein VgrG
D RD2015_2648 VgrG protein K11904 vgrG; type VI secretion system secreted protein VgrG
D RD2015_3222 VgrG protein K11904 vgrG; type VI secretion system secreted protein VgrG
D RD2015_2633 hypothetical protein K11906 vasD; type VI secretion system protein VasD
D RD2015_2658 ATPase AAA K11907 vasG; type VI secretion system protein VasG
D RD2015_2637 Protein phosphatase ImpM K11890 impM; type VI secretion system protein ImpM
D RD2015_2662 Protein of avirulence locus ImpE K11898 impE; type VI secretion system protein ImpE
D RD2015_4193 hypothetical protein K07346 fimC; fimbrial chaperone protein
D RD2015_4192 hypothetical protein K07347 fimD; outer membrane usher protein
D RD2015_4195 Spore coat protein U K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D RD2015_4194 Spore coat protein U K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D RD2015_832 Spore coat protein U K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D RD2015_4191 Spore coat protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D RD2015_1305 Protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RD2015_4107 Protein-export protein SecB K03071 secB; preprotein translocase subunit SecB
D RD2015_600 preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D RD2015_539 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D RD2015_601 Protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D RD2015_3009 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D RD2015_575 Protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D RD2015_4163 signal recognition particle protein Srp54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D RD2015_4164 cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D RD2015_599 Preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D RD2015_4842 Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RD2015_1287 preprotein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA
D RD2015_1288 Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D RD2015_1289 Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:rdp02042]
D RD2015_1597 CBS domain protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D RD2015_2333 membrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D RD2015_1303 hemolysin D K11068 hlyIII; hemolysin III
D RD2015_488 hypothetical protein K01114 plc; phospholipase C [EC:3.1.4.3]
D RD2015_744 phospholipase K01114 plc; phospholipase C [EC:3.1.4.3]
C 02022 Two-component system [BR:rdp02022]
D RD2015_2144 Phosphate regulon sensor protein PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D RD2015_2143 chemotaxis protein CheY K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D RD2015_3393 Osmolarity sensor protein EnvZ K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D RD2015_1588 hypothetical protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D RD2015_3392 Osmolarity response regulator K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D RD2015_4608 hypothetical protein K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3]
D RD2015_3197 histidine kinase K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3]
D RD2015_1593 transcriptional regulator K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D RD2015_1589 transcriptional regulator K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D RD2015_4819 histidine kinase K07641 creC; two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3]
D RD2015_4820 transcriptional regulator K07663 creB; two-component system, OmpR family, catabolic regulation response regulator CreB
D RD2015_2689 Sensor protein CzcS K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D RD2015_2693 histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D RD2015_2694 transcriptional regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D RD2015_2711 transcriptional regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D RD2015_2725 sensor protein KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D RD2015_2724 transcriptional regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D RD2015_2808 hypothetical protein K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D RD2015_4829 Sensor protein QseC K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D RD2015_2497 histidine kinase K18143 adeS; two-component system, OmpR family, sensor histidine kinase AdeS [EC:2.7.13.3]
D RD2015_2498 Two component transcriptional regulator K18144 adeR; two-component system, OmpR family, response regulator AdeR
D RD2015_2961 Signal transduction histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D RD2015_4616 Signal transduction histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D RD2015_2428 transcriptional regulatory protein AruR K02483 K02483; two-component system, OmpR family, response regulator
D RD2015_4609 chemotaxis protein CheY K02483 K02483; two-component system, OmpR family, response regulator
D RD2015_805 transcriptional regulator K02483 K02483; two-component system, OmpR family, response regulator
D RD2015_3807 transcriptional regulator K02483 K02483; two-component system, OmpR family, response regulator
D RD2015_4706 transcriptional regulator K02483 K02483; two-component system, OmpR family, response regulator
D RD2015_1849 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain K02483 K02483; two-component system, OmpR family, response regulator
D RD2015_4830 Winged helix family two component transcriptional regulator K02483 K02483; two-component system, OmpR family, response regulator
D RD2015_1933 transcriptional regulator K02483 K02483; two-component system, OmpR family, response regulator
D RD2015_2962 Two component transcriptional regulator, winged helix family K02483 K02483; two-component system, OmpR family, response regulator
D RD2015_4254 chemotaxis protein CheY K02483 K02483; two-component system, OmpR family, response regulator
D RD2015_3123 transcriptional regulator K02483 K02483; two-component system, OmpR family, response regulator
D RD2015_2467 chemotaxis protein CheY K02483 K02483; two-component system, OmpR family, response regulator
D RD2015_836 hypothetical protein K02483 K02483; two-component system, OmpR family, response regulator
D RD2015_2784 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain K02483 K02483; two-component system, OmpR family, response regulator
D RD2015_2120 response regulator K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D RD2015_4730 LuxR family transcriptional regulator K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D RD2015_4461 histidine kinase K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D RD2015_4123 LuxR family transcriptional regulator K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D RD2015_1710 LuxR family transcriptional regulator K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D RD2015_55 hisitidine kinase K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D RD2015_3596 histidine kinase K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3]
D RD2015_3724 histidine kinase K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3]
D RD2015_3723 Transcriptional regulator, LytR/AlgR family K08083 algR; two-component system, LytTR family, response regulator AlgR
D RD2015_1357 histidine kinase K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D RD2015_1358 chemotaxis protein CheY K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D RD2015_4553 Nitrogen regulation protein NtrY K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D RD2015_4554 XRE family transcriptional regulator K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D RD2015_4160 Histidine kinase K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D RD2015_4159 Two-component system response regulator PilR K02667 pilR; two-component system, NtrC family, response regulator PilR
D RD2015_4788 Integral membrane sensor signal transduction histidine kinase K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
D RD2015_4786 Two component, sigma54 specific, transcriptional regulator, Fis family K07715 glrR; two-component system, NtrC family, response regulator GlrR
D RD2015_2802 hypothetical protein K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D RD2015_2803 Fis family transcriptional regulator K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
D RD2015_1136 Sensor protein ZraS K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D RD2015_3604 hypothetical protein K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D RD2015_2481 hypothetical protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RD2015_1706 Chemotaxis sensor histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RD2015_1184 Chemotaxis protein histidine kinase-like protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RD2015_1565 chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RD2015_1749 Response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RD2015_2479 Response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RD2015_2482 Response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RD2015_1707 Chemotaxis signal transduction protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RD2015_2485 Chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RD2015_1183 Chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RD2015_3703 chemotaxis protein K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RD2015_782 histidine kinase K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D RD2015_4126 Chemotaxis protein CheA K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D RD2015_4130 pilus response regulator PilG K02657 pilG; twitching motility two-component system response regulator PilG
D RD2015_4129 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain K02658 pilH; twitching motility two-component system response regulator PilH
D RD2015_2819 putative histidine kinase, classic K11354 cph1; two-component system, chemotaxis family, sensor kinase Cph1 [EC:2.7.13.3]
D RD2015_4579 histidine kinase K11711 dctS; two-component system, LuxR family, sensor histidine kinase DctS [EC:2.7.13.3]
D RD2015_800 cytochrome C biogenesis protein CcmE K11711 dctS; two-component system, LuxR family, sensor histidine kinase DctS [EC:2.7.13.3]
D RD2015_4578 histidine kinase K11712 dctR; two-component system, LuxR family, response regulator DctR
D RD2015_801 histidine kinase K11712 dctR; two-component system, LuxR family, response regulator DctR
D RD2015_1165 Histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D RD2015_1166 Two-component response regulator K15012 regA; two-component system, response regulator RegA
D RD2015_3574 Signal transduction histidine kinase K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3]
D RD2015_3588 sensory box sensor histidine kinase/response regulator K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3]
D RD2015_2668 Histidine kinase K20975 K20975; two-component system, sensor histidine kinase [EC:2.7.13.3]
D RD2015_1768 hypothetical protein K20976 hptB; histidine phosphotransfer protein HptB
D RD2015_1770 putative response regulator K22010 pdtaR; two-component system, response regulator PdtaR
D RD2015_4406 Response regulator NasT K07183 nasT; two-component system, response regulator / RNA-binding antiterminator
D RD2015_1142 GAF sensor hybrid histidine kinase K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
C 02035 Bacterial motility proteins [BR:rdp02035]
D RD2015_2481 hypothetical protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RD2015_1706 Chemotaxis sensor histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RD2015_1184 Chemotaxis protein histidine kinase-like protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RD2015_3409 Chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D RD2015_2486 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D RD2015_1704 Chemotaxis signal transduction protein K03408 cheW; purine-binding chemotaxis protein CheW
D RD2015_3702 chemotaxis protein CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D RD2015_2483 Chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D RD2015_1187 hypothetical protein K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D RD2015_3701 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D RD2015_2088 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D RD2015_2485 Chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RD2015_1183 Chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RD2015_3703 chemotaxis protein K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RD2015_782 histidine kinase K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D RD2015_1565 chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RD2015_1749 Response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RD2015_2479 Response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RD2015_2482 Response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RD2015_1707 Chemotaxis signal transduction protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RD2015_905 Protein phosphatase CheZ K03414 cheZ; chemotaxis protein CheZ
D RD2015_1750 chemotaxis protein Z K03414 cheZ; chemotaxis protein CheZ
D RD2015_1929 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RD2015_4240 Methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D RD2015_3495 Chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RD2015_1326 Methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D RD2015_4110 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RD2015_1705 Methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D RD2015_3281 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RD2015_1466 Methyl-accepting chemotaxis transducer transmembrane protein K03406 mcp; methyl-accepting chemotaxis protein
D RD2015_2457 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RD2015_2478 Putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RD2015_2487 Methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D RD2015_775 Chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RD2015_850 membrane protein K03406 mcp; methyl-accepting chemotaxis protein
D RD2015_893 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RD2015_1756 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RD2015_4727 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RD2015_35 Methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein
D RD2015_1141 Chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RD2015_1214 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RD2015_2246 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RD2015_3410 Chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RD2015_4395 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RD2015_764 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein
D RD2015_2244 Methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D RD2015_840 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RD2015_514 Aerotaxis receptor K03776 aer; aerotaxis receptor
D RD2015_2704 Aerotaxis sensor receptor transmembrane protein K03776 aer; aerotaxis receptor
D RD2015_3529 Flagellar assembly FliH family protein K02411 fliH; flagellar assembly protein FliH
D RD2015_1728 Flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D RD2015_3528 ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D RD2015_1727 ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D RD2015_1726 Flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ
D RD2015_1721 Flagellar biogenesis protein K02418 fliO; flagellar protein FliO/FliZ
D RD2015_3536 Flagellar biosynthesis protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D RD2015_1720 Flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D RD2015_3537 flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D RD2015_1719 Flagellar biosynthesis protein K02420 fliQ; flagellar biosynthesis protein FliQ
D RD2015_3538 flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D RD2015_1718 Flagellar biosynthetic protein fliR K02421 fliR; flagellar biosynthesis protein FliR
D RD2015_1752 Flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D RD2015_3540 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D RD2015_1751 Flagellar biosynthesis protein K02401 flhB; flagellar biosynthesis protein FlhB
D RD2015_3539 flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D RD2015_3530 Putative lateral flagellar LfiG-like motor switch protein K02410 fliG; flagellar motor switch protein FliG
D RD2015_1729 Flagellar motor switch protein K02410 fliG; flagellar motor switch protein FliG
D RD2015_1723 Flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D RD2015_3534 hypothetical protein K02416 fliM; flagellar motor switch protein FliM
D RD2015_3535 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D RD2015_1722 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D RD2015_3531 Flagellar M-ring protein K02409 fliF; flagellar M-ring protein FliF
D RD2015_1730 Flagellar M-ring protein K02409 fliF; flagellar M-ring protein FliF
D RD2015_1776 Flagellar P-ring protein K02394 flgI; flagellar P-ring protein FlgI
D RD2015_3507 Flagellar P-ring protein K02394 flgI; flagellar P-ring protein FlgI
D RD2015_1784 hypothetical protein K02386 flgA; flagellar basal body P-ring formation protein FlgA
D RD2015_3515 Flagella basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D RD2015_1777 Flagellar L-ring protein K02393 flgH; flagellar L-ring protein FlgH
D RD2015_3824 hypothetical protein K02393 flgH; flagellar L-ring protein FlgH
D RD2015_3508 Flagellar L-ring protein K02393 flgH; flagellar L-ring protein FlgH
D RD2015_3522 Flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D RD2015_1724 Flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D RD2015_3532 Flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D RD2015_1731 Flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D RD2015_3523 hypothetical protein K02414 fliK; flagellar hook-length control protein FliK
D RD2015_1725 hypothetical protein K02414 fliK; flagellar hook-length control protein FliK
D RD2015_1783 Flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D RD2015_3514 flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D RD2015_1782 flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D RD2015_3513 flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D RD2015_1781 Flagellar basal-body rod modification protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D RD2015_3512 Putative basal-body rod modification protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D RD2015_1779 Flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D RD2015_3510 flagellar basal body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D RD2015_1778 Flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D RD2015_3509 flagellar basal body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D RD2015_1775 Flagellum-specific muramidase K02395 flgJ; peptidoglycan hydrolase FlgJ
D RD2015_3506 Peptidoglycan hydrolase K02395 flgJ; peptidoglycan hydrolase FlgJ
D RD2015_3516 Peptidoglycan hydrolase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ
D RD2015_1780 Flagellar basal body and hook protein K02390 flgE; flagellar hook protein FlgE
D RD2015_3511 flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D RD2015_1774 Flagellar hook-associated protein 1 K02396 flgK; flagellar hook-associated protein 1
D RD2015_3505 Lateral flagellar hook associated protein 1 LfgK K02396 flgK; flagellar hook-associated protein 1
D RD2015_1773 hypothetical protein K02397 flgL; flagellar hook-associated protein 3 FlgL
D RD2015_3504 Flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL
D RD2015_3517 Flagellar protein LfgN K02399 flgN; flagellar biosynthesis protein FlgN
D RD2015_1736 Flagellin FliC K02406 fliC; flagellin
D RD2015_1737 Flagellin domain protein K02406 fliC; flagellin
D RD2015_1739 Flagellin domain protein K02406 fliC; flagellin
D RD2015_1836 Flagellin p6-like protein K02406 fliC; flagellin
D RD2015_1735 Flagellar hook-associated 2 domain protein K02407 fliD; flagellar hook-associated protein 2
D RD2015_3526 hypothetical protein K02407 fliD; flagellar hook-associated protein 2
D RD2015_1734 Flagellar biosynthetic protein FliS K02422 fliS; flagellar secretion chaperone FliS
D RD2015_3525 flagellar biosynthesis protein FliS K02422 fliS; flagellar secretion chaperone FliS
D RD2015_1733 Putative flagellar protein FliT K02423 fliT; flagellar protein FliT
D RD2015_1741 Flagellar transcriptional regulator FlhD K02403 flhD; flagellar transcriptional activator FlhD
D RD2015_1744 Flagellar transcriptional regulator FlhD K02403 flhD; flagellar transcriptional activator FlhD
D RD2015_1742 Flagellar transcriptional regulator FlhC K02402 flhC; flagellar transcriptional activator FlhC
D RD2015_1745 Flagellar transcriptional regulator FlhC K02402 flhC; flagellar transcriptional activator FlhC
D RD2015_1755 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
D RD2015_3521 flagellar biosynthesis sigma factor K02405 fliA; RNA polymerase sigma factor FliA
D RD2015_1747 Chemotaxis signal transduction protein CheY K02556 motA; chemotaxis protein MotA
D RD2015_3520 Chemotaxis protein LafT K02556 motA; chemotaxis protein MotA
D RD2015_1748 Outer membrane chemotaxis MotB protein K02557 motB; chemotaxis protein MotB
D RD2015_3519 Chemotaxis protein LafU K02557 motB; chemotaxis protein MotB
D RD2015_767 cysteine ABC transporter substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D RD2015_1785 hypothetical protein K02398 flgM; negative regulator of flagellin synthesis FlgM
D RD2015_3518 Putative negative regulator of flagellin synthesis LfgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D RD2015_1753 Flagellar GTP-binding protein K02404 flhF; flagellar biosynthesis protein FlhF
D RD2015_3699 Site-determining protein K04562 flhG; flagellar biosynthesis protein FlhG
D RD2015_4130 pilus response regulator PilG K02657 pilG; twitching motility two-component system response regulator PilG
D RD2015_4129 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain K02658 pilH; twitching motility two-component system response regulator PilH
D RD2015_4128 chemotaxis protein CheW K02659 pilI; twitching motility protein PilI
D RD2015_4127 Methyl-accepting chemotaxis sensory transducer K02660 pilJ; twitching motility protein PilJ
D RD2015_4126 Chemotaxis protein CheA K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D RD2015_4159 Two-component system response regulator PilR K02667 pilR; two-component system, NtrC family, response regulator PilR
D RD2015_4160 Histidine kinase K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D RD2015_919 twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D RD2015_920 twitching motility protein PilT K02670 pilU; twitching motility protein PilU
D RD2015_2314 Twitching motility protein PilU PilT like K02670 pilU; twitching motility protein PilU
D RD2015_4694 Fimbrial protein ecpC K02650 pilA; type IV pilus assembly protein PilA
D RD2015_4695 methylation K02650 pilA; type IV pilus assembly protein PilA
D RD2015_984 fimbrial assembly protein K02650 pilA; type IV pilus assembly protein PilA
D RD2015_1001 Type II traffic warden ATPase K02652 pilB; type IV pilus assembly protein PilB
D RD2015_1000 type II secretion system protein F K02653 pilC; type IV pilus assembly protein PilC
D RD2015_999 peptidase A24 K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D RD2015_1487 Type IV pilus biogenesis/stability protein PilW K02656 pilF; type IV pilus assembly protein PilF
D RD2015_972 secretin K02666 pilQ; type IV pilus assembly protein PilQ
D RD2015_971 pilus assembly protein PilP K02665 pilP; type IV pilus assembly protein PilP
D RD2015_970 pilus assembly protein PilO K02664 pilO; type IV pilus assembly protein PilO
D RD2015_969 Fimbrial assembly protein K02663 pilN; type IV pilus assembly protein PilN
D RD2015_968 pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
D RD2015_3153 pilus assembly protein PilZ K02676 pilZ; type IV pilus assembly protein PilZ
D RD2015_982 hypothetical protein K02671 pilV; type IV pilus assembly protein PilV
D RD2015_981 hypothetical protein K02672 pilW; type IV pilus assembly protein PilW
D RD2015_979 Pilus tip-associated protein K02674 pilY1; type IV pilus assembly protein PilY1
D RD2015_2363 hypothetical protein K02655 pilE; type IV pilus assembly protein PilE
D RD2015_4193 hypothetical protein K07346 fimC; fimbrial chaperone protein
D RD2015_4192 hypothetical protein K07347 fimD; outer membrane usher protein
D RD2015_4195 Spore coat protein U K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D RD2015_4194 Spore coat protein U K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D RD2015_832 Spore coat protein U K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D RD2015_4191 Spore coat protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:rdp04812]
D RD2015_4712 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D RD2015_1231 Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D RD2015_1230 cell division protein FtsA K03590 ftsA; cell division protein FtsA
D RD2015_1797 Septum formation inhibitor MinC K03610 minC; septum site-determining protein MinC
D RD2015_1798 cell division inhibitor MinD K03609 minD; septum site-determining protein MinD
D RD2015_1799 cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D RD2015_1790 Putative partition-like protein K03496 parA; chromosome partitioning protein
D RD2015_112 Chromosome segregation ATPase K03496 parA; chromosome partitioning protein
D RD2015_107 ParB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:rdp04147]
D RD2015_928 Chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
D RD2015_2836 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RD2015_4531 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RD2015_613 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D RD2015_616 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RD2015_3250 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D RD2015_4257 molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RD2015_1569 Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D RD2015_994 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RD2015_4277 hypothetical protein K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D RD2015_3483 hypothetical protein K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D RD2015_3358 inosine-5-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D RD2015_538 elongation factor Tu K02358 tuf; elongation factor Tu
D RD2015_552 elongation factor Tu K02358 tuf; elongation factor Tu
D RD2015_1286 Putative histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D RD2015_1796 bile acid:sodium symporter K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D RD2015_4432 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RD2015_4649 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RD2015_4804 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RD2015_1346 Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RD2015_1393 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RD2015_829 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RD2015_4513 peptidyl-dipeptidase K01283 ACE; peptidyl-dipeptidase A [EC:3.4.15.1]
D RD2015_658 Adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D RD2015_3314 hypothetical protein K00939 adk; adenylate kinase [EC:2.7.4.3]
D RD2015_4840 Adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D RD2015_3725 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D RD2015_162 Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D RD2015_66 Cystathionine gamma-lyase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D RD2015_1544 Fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
D RD2015_1612 fructose-1 6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D RD2015_2683 Galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D RD2015_3660 glycogen branching protein K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D RD2015_314 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D RD2015_4457 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D RD2015_4430 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D RD2015_2270 Putative pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D RD2015_4370 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D RD2015_1800 3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D RD2015_1244 Bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D RD2015_3558 Zn-dependent protease with chaperone function K06013 STE24; STE24 endopeptidase [EC:3.4.24.84]
D RD2015_1337 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RD2015_1475 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RD2015_1463 Electron transfer flavoprotein, alpha subunit K03522 fixB; electron transfer flavoprotein alpha subunit
D RD2015_4834 glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D RD2015_992 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D RD2015_3010 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D RD2015_4113 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D RD2015_1554 Lipocalin family protein K03098 APOD; apolipoprotein D and lipocalin family protein
C 02048 Prokaryotic defense system [BR:rdp02048]
D RD2015_2207 D12 class N6 adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D RD2015_1880 Upf31.0 K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D RD2015_37 Site-specific DNA-methyltransferase K07317 K07317; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D RD2015_4165 HNH endonuclease K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]
D RD2015_3667 phosphatidylinositol kinase K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D RD2015_1669 hypothetical protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D RD2015_2555 Phosphatidylinositol kinase K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D RD2015_4662 hypothetical protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D RD2015_1054 toxin HipA K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D RD2015_3997 XRE family transcriptional regulator K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB
D RD2015_4645 Plasmid stabilization protein K19092 parE1_3_4; toxin ParE1/3/4
D RD2015_4644 addiction module antitoxin K07746 parD1_3_4; antitoxin ParD1/3/4
D RD2015_3799 hypothetical protein K13655 mqsA; HTH-type transcriptional regulator / antitoxin MqsA
D RD2015_1231 Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D RD2015_4712 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D RD2015_1919 DNA topoisomerase 4 subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D RD2015_1916 DNA topoisomerase 4 subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D RD2015_2306 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RD2015_1369 hypothetical protein K19168 cptA; toxin CptA
D RD2015_2754 hypothetical protein K09159 cptB; antitoxin CptB
D RD2015_2009 Cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RD2015_660 hypothetical protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules [BR:rdp04090]
D RD2015_4277 hypothetical protein K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D RD2015_3483 hypothetical protein K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D RD2015_4513 peptidyl-dipeptidase K01283 ACE; peptidyl-dipeptidase A [EC:3.4.15.1]
C 01504 Antimicrobial resistance genes [BR:rdp01504]
D RD2015_3357 Tetracycline-efflux transporter K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein
D RD2015_2689 Sensor protein CzcS K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D RD2015_2693 histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D RD2015_2694 transcriptional regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D RD2015_2711 transcriptional regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D RD2015_276 D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D RD2015_4319 multidrug transporter K03585 acrA; membrane fusion protein, multidrug efflux system
D RD2015_2474 Secretion protein HlyD family protein K03585 acrA; membrane fusion protein, multidrug efflux system
D RD2015_4318 acriflavine resistance protein B K18138 acrB; multidrug efflux pump
D RD2015_4317 RND efflux system outer membrane lipoprotein K18139 oprM; outer membrane protein, multidrug efflux system
D RD2015_4369 Type I secretion outer membrane protein K18139 oprM; outer membrane protein, multidrug efflux system
D RD2015_2883 NodT family efflux transporter, outer membrane factor (OMF) lipoprotein K18139 oprM; outer membrane protein, multidrug efflux system
D RD2015_1451 RND family efflux transporter MFP subunit K18302 mexJ; membrane fusion protein, multidrug efflux system
D RD2015_1452 Putative transmembrane drug efflux protein K18303 mexK; multidrug efflux pump
D RD2015_4355 Transcriptional regulator, MerR family K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D RD2015_2497 histidine kinase K18143 adeS; two-component system, OmpR family, sensor histidine kinase AdeS [EC:2.7.13.3]
D RD2015_2498 Two component transcriptional regulator K18144 adeR; two-component system, OmpR family, response regulator AdeR
D RD2015_2500 Efflux transporter K18145 adeA; membrane fusion protein, multidrug efflux system
D RD2015_2499 Acriflavine resistance protein B K18146 adeB; multidrug efflux pump
D RD2015_3239 type I secretion protein TolC K12340 tolC; outer membrane protein
D RD2015_2104 Outer membrane protein TolC K12340 tolC; outer membrane protein
D RD2015_807 transcriptional regulator K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC
D RD2015_4802 Transcriptional regulator, LysR family K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC
D RD2015_810 Efflux transporter, RND family, MFP subunit K18901 bpeE; membrane fusion protein, multidrug efflux system
D RD2015_811 AcrB/AcrD/AcrF family protein K18902 bpeF; multidrug efflux pump
D RD2015_812 RND efflux system, outer membrane lipoprotein, NodT K18903 oprC; outer membrane protein, multidrug efflux system
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins [BR:rdp00536]
D RD2015_1169 hypothetical protein K15125 fhaB; filamentous hemagglutinin
D RD2015_1268 Hemagglutinin-related protein K15125 fhaB; filamentous hemagglutinin
D RD2015_4512 hypothetical protein K15125 fhaB; filamentous hemagglutinin
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:rdp00537]
D RD2015_4370 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins [BR:rdp03200]
D RD2015_2242 hypothetical protein K14744 rzpD; prophage endopeptidase [EC:3.4.-.-]
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:rdp03100]
D RD2015_R038 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RD2015_R041 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RD2015_R029 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RD2015_R049 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RD2015_R066 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RD2015_R037 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RD2015_R058 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RD2015_R059 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RD2015_R060 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RD2015_R001 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RD2015_R061 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D RD2015_R062 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D RD2015_R043 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D RD2015_R040 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D RD2015_R017 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D RD2015_R010 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D RD2015_R042 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D RD2015_R039 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D RD2015_R003 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RD2015_R018 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RD2015_R019 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RD2015_R032 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RD2015_R016 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RD2015_R035 tRNA-His K14226 tRNA-His; tRNA His
D RD2015_R028 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D RD2015_R067 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D RD2015_R015 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RD2015_R020 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RD2015_R021 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RD2015_R048 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RD2015_R044 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RD2015_R072 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RD2015_R054 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D RD2015_R055 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D RD2015_R056 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D RD2015_R006 tRNA-Met K14230 tRNA-Met; tRNA Met
D RD2015_R007 tRNA-Met K14230 tRNA-Met; tRNA Met
D RD2015_R011 tRNA-Met K14230 tRNA-Met; tRNA Met
D RD2015_R063 tRNA-Met K14230 tRNA-Met; tRNA Met
D RD2015_R073 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D RD2015_R014 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D RD2015_R036 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D RD2015_R009 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D RD2015_R022 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RD2015_R045 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RD2015_R050 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RD2015_R057 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RD2015_R013 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RD2015_R023 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RD2015_R004 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RD2015_R005 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D RD2015_R002 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D RD2015_R034 tRNA-Val K14237 tRNA-Val; tRNA Val
D RD2015_R046 tRNA-Val K14237 tRNA-Val; tRNA Val
D RD2015_R053 tRNA-Val K14237 tRNA-Val; tRNA Val
D RD2015_R047 tRNA-Val K14237 tRNA-Val; tRNA Val
D RD2015_R027 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RD2015_R068 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RD2015_R071 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RD2015_R024 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RD2015_R025 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RD2015_R030 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RD2015_R065 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RD2015_R070 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RD2015_R031 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D RD2015_R026 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D RD2015_R064 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D RD2015_R069 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D RD2015_R012 Bacterial RNase P class A K01978 rnpB; M1 RNA
D RD2015_R033 transfer-messenger RNA K15035 ssrA; transfer-messenger RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D RD2015_3617 Putative oxidoreductase, SDR family K16216 yueD; benzil reductase ((S)-benzoin forming) [EC:1.1.1.320]
D RD2015_4422 Glucose sorbosone dehydrogenase K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-]
D RD2015_1242 coniferyl aldehyde dehydrogenase K00154 E1.2.1.68; coniferyl-aldehyde dehydrogenase [EC:1.2.1.68]
D RD2015_901 MFS transporter K04090 E1.2.7.8; indolepyruvate ferredoxin oxidoreductase [EC:1.2.7.8]
D RD2015_467 Pyruvate/ketoisovalerate oxidoreductase K04090 E1.2.7.8; indolepyruvate ferredoxin oxidoreductase [EC:1.2.7.8]
D RD2015_1398 2-alkenal reductase K23256 curA; NADPH-dependent curcumin reductase [EC:1.3.1.-]
D RD2015_4767 (2Fe-2S)-binding protein K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16]
D RD2015_4776 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16]
D RD2015_4351 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16]
D RD2015_4768 Putative isoquinoline 1-oxidoreductase beta subunit K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16]
D RD2015_4777 Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16]
D RD2015_4352 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16]
D RD2015_3231 dehydrogenase K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1]
D RD2015_2532 hypothetical protein K18208 RNLS; renalase [EC:1.6.3.5]
D RD2015_3601 quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D RD2015_2121 NADPH:quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D RD2015_27 Putative alcohol dehydrogenase zinc-binding domain protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D RD2015_4359 FMN-dependent NADH-azoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D RD2015_1654 Alkyl hydroperoxide reductase subunit F K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-]
D RD2015_2375 Peptide methionine sulfoxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D RD2015_1381 methionine sulfoxide reductase B K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D RD2015_2250 glutathione S-transferase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D RD2015_1889 glutathione S-transferase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D RD2015_4264 Sulfoxide reductase catalytic subunit YedY K07147 msrP; methionine sulfoxide reductase catalytic subunit [EC:1.8.-.-]
D RD2015_2174 Putative cytochrome-c peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D RD2015_1888 cytochrome C peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D RD2015_881 Alpha/beta hydrolase family protein K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10]
D RD2015_165 chloroperoxidase K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10]
D RD2015_3044 Putative hydrolase K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10]
D RD2015_3034 peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D RD2015_87 Putative antioxidant peroxidase K24158 prx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D RD2015_1653 Alkyl hydroperoxide reductase subunit C K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26]
D RD2015_2365 peroxiredoxin K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D RD2015_2309 organic hydroperoxide resistance protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D RD2015_4358 Pirin domain protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D RD2015_2091 Pirin domain protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D RD2015_3645 pirin K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D RD2015_4356 Pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D RD2015_4684 Fe(II)-dependent oxygenase K07336 K07336; PKHD-type hydroxylase [EC:1.14.11.-]
D RD2015_3014 Hemoglobin-like flavoprotein K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17]
D RD2015_911 copper oxidase K22348 moxA; manganese oxidase [EC:1.16.3.3]
D RD2015_1448 Squalene-associated FAD-dependent desaturase K21677 hpnE; hydroxysqualene dehydroxylase [EC:1.17.8.1]
D RD2015_2384 arsenate reductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D RD2015_2387 ArsC family transcriptional regulator K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D RD2015_2123 Protein-L-isoaspartate(D-aspartate) O-methyltransferase Pcm K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D RD2015_2102 protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D RD2015_2458 cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D RD2015_2466 cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D RD2015_1832 cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D RD2015_2024 carbamoyltransferase K00612 nodU; carbamoyltransferase [EC:2.1.3.-]
D RD2015_2952 Carbamoyltransferase K00612 nodU; carbamoyltransferase [EC:2.1.3.-]
D RD2015_2779 3-oxoacyl-[acyl-carrier-protein] synthase, KASIII K16872 E2.3.1.207; beta-ketodecanoyl-[acyl-carrier-protein] synthase [EC:2.3.1.207]
D RD2015_4386 Apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D RD2015_3687 GCN5 family acetyltransferase K03829 yedL; putative acetyltransferase [EC:2.3.1.-]
D RD2015_1208 Acetyltransferase K03829 yedL; putative acetyltransferase [EC:2.3.1.-]
D RD2015_2900 glutamine cyclotransferase K22757 QCT; glutaminyl-peptide cyclotransferase [EC:2.3.2.5]
D RD2015_2946 Leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D RD2015_1966 Transglutaminase-like enzyme, predicted cysteine protease K22452 tgpA; protein-glutamine gamma-glutamyltransferase [EC:2.3.2.13]
D RD2015_2947 Putative arginyl-tRNA--protein transferase K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29]
D RD2015_4060 Group 1 glycosyl transferase K00754 bshA; L-malate glycosyltransferase [EC:2.4.1.-]
D RD2015_3340 2-(5'-triphosphoribosyl)-3'-dephospho CoA synthase K13930 mdcB; triphosphoribosyl-dephospho-CoA synthase [EC:2.4.2.52]
D RD2015_585 DTW domain containing protein K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25]
D RD2015_2956 Prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D RD2015_4680 Thiamine biosynthesis lipoprotein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D RD2015_1522 PEP synthetase regulatory protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D RD2015_4500 Glutamate-ammonia-ligase adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D RD2015_4202 RNA-directed DNA polymerase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D RD2015_779 diguanylate cyclase K13069 E2.7.7.65; diguanylate cyclase [EC:2.7.7.65]
D RD2015_3341 ACP synthase K13934 mdcG; phosphoribosyl-dephospho-CoA transferase [EC:2.7.7.66]
D RD2015_1382 hypothetical protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108]
D RD2015_828 isocitrate dehydrogenase K00906 aceK; isocitrate dehydrogenase kinase/phosphatase [EC:2.7.11.5 3.1.3.-]
D RD2015_4564 HPr kinase/phosphorylase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-]
D RD2015_804 Alpha/beta hydrolase fold protein K03928 yvaK; carboxylesterase [EC:3.1.1.1]
D RD2015_3688 Appr-1-p processing domain protein K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106]
D RD2015_1617 Putative thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D RD2015_3894 thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D RD2015_3227 thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D RD2015_2354 Tol-pal system-associated acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D RD2015_1632 phosphoesterase K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D RD2015_2332 phosphohistidine phosphatase K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D RD2015_4508 Putative response regulator receiver protein K07814 K07814; cyclic di-GMP phosphodiesterase [EC:3.1.4.-]
D RD2015_2744 Response regulator K07814 K07814; cyclic di-GMP phosphodiesterase [EC:3.1.4.-]
D RD2015_3785 Phosphodiesterase K25135 K25135; cyclic di-GMP phosphodiesterase [EC:3.1.4.-]
D RD2015_3152 DNAase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D RD2015_1677 DNAase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D RD2015_2670 hypothetical protein K01224 E3.2.1.89; arabinogalactan endo-1,4-beta-galactosidase [EC:3.2.1.89]
D RD2015_2674 arabinogalactan endo-1,4-beta-galactosidase K01224 E3.2.1.89; arabinogalactan endo-1,4-beta-galactosidase [EC:3.2.1.89]
D RD2015_3652 alpha-amlyase K21575 susA; neopullulanase [EC:3.2.1.135]
D RD2015_1370 Peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D RD2015_606 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D RD2015_4502 acyltransferase K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128]
D RD2015_2862 LmbE family protein K01463 bshB1; N-acetylglucosamine malate deacetylase 1 [EC:3.5.1.-]
D RD2015_1351 peptidase A8 K01567 pdaA; peptidoglycan-N-acetylmuramic acid deacetylase [EC:3.5.1.-]
D RD2015_4029 septum formation inhibitor Maf K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-]
D RD2015_4213 ATPase AAA K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D RD2015_1968 ATPase AAA K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D RD2015_4329 ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D RD2015_88 Alpha/beta hydrolase fold esterase-like protein K07002 RBBP9; serine hydrolase [EC:3.-.-.-]
D RD2015_108 Putative esterase of the alpha/beta hydrolase fold protein K07002 RBBP9; serine hydrolase [EC:3.-.-.-]
D RD2015_3343 Malonate decarboxylase, beta subunit K13932 mdcD; malonate decarboxylase beta subunit [EC:4.1.1.87]
D RD2015_3342 Malonate decarboxylase, gamma subunit K13933 mdcE; malonate decarboxylase gamma subunit [EC:4.1.1.87]
D RD2015_3948 67 kDa myosin-cross-reactive antigen family protein K10254 ohyA; oleate hydratase [EC:4.2.1.53]
D RD2015_1504 Carbohydrate kinase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D RD2015_3591 Hydroxypyruvate isomerase K22131 otnI; 2-dehydrotetronate isomerase [EC:5.3.1.35]
D RD2015_4407 methylmalonyl-CoA mutase K11942 icmF; isobutyryl-CoA mutase [EC:5.4.99.13]
D RD2015_819 cyanophycin synthetase K03802 cphA; cyanophycin synthetase [EC:6.3.2.29 6.3.2.30]
D RD2015_820 Cyanophycin synthetase K03802 cphA; cyanophycin synthetase [EC:6.3.2.29 6.3.2.30]
D RD2015_4134 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45]
D RD2015_47 RNA 3'-terminal-phosphate cyclase K01974 RTCA; RNA 3'-terminal phosphate cyclase (ATP) [EC:6.5.1.4]
D RD2015_2002 ferredoxin K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D RD2015_3306 Putative cation transport P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D RD2015_2701 ATPase K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D RD2015_4723 ATPase P K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
C 99981 Carbohydrate metabolism
C 99982 Energy metabolism
D RD2015_794 Protein FdhD-like protein K02379 fdhD; FdhD protein
D RD2015_3914 ferredoxin K05524 fdxA; ferredoxin
D RD2015_2010 scaffolding protein K04488 iscU; nitrogen fixation protein NifU and related proteins
D RD2015_1462 electron transfer flavoprotein subunit beta K03521 fixA; electron transfer flavoprotein beta subunit
C 99983 Lipid metabolism
D RD2015_1404 Acyl-CoA dehydrogenase domain protein K09456 aidB; putative acyl-CoA dehydrogenase
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D RD2015_848 Glyoxylase I family protein K08234 yaeR; glyoxylase I family protein
D RD2015_918 Pyridoxal phosphate enzyme, YggS family K06997 yggS; PLP dependent protein
D RD2015_3788 GCN5 family N-acetyltransferase K22479 argA; N-acetyltransferase
C 99986 Glycan metabolism
D RD2015_1857 Uncharacterized integral membrane protein K08992 lapA; lipopolysaccharide assembly protein A
D RD2015_1856 hypothetical protein K19804 lapB; lipopolysaccharide assembly protein B
D RD2015_3080 Membrane protein K07027 K07027; glycosyltransferase 2 family protein
C 99987 Cofactor metabolism
D RD2015_3718 porphyrin biosynthesis protein K02498 hemY; HemY protein
D RD2015_3852 ubiquinone biosynthesis protein UbiB K03688 ubiB; ubiquinone biosynthesis protein
D RD2015_3853 hypothetical protein K03690 ubiJ; ubiquinone biosynthesis accessory factor UbiJ
D RD2015_1026 Alpha/beta hydrolase K06049 bchO; magnesium chelatase accessory protein
C 99988 Secondary metabolism
D RD2015_4647 NADPH-dependent FMN reductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone)
C 99999 Others
D RD2015_698 DoxD-like family protein K15977 K15977; putative oxidoreductase
D RD2015_1695 membrane protein K15977 K15977; putative oxidoreductase
D RD2015_4374 Putatie phospholipase/carboxylesterase K06999 K06999; phospholipase/carboxylesterase
D RD2015_4618 Hydrolase K06999 K06999; phospholipase/carboxylesterase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D RD2015_2161 cold-shock protein K03704 cspA; cold shock protein
D RD2015_4301 cold-shock protein K03704 cspA; cold shock protein
D RD2015_3271 cold-shock protein K03704 cspA; cold shock protein
D RD2015_1051 Cold-shock DNA-binding protein family protein K03704 cspA; cold shock protein
D RD2015_393 nitrogen regulatory protein P-II 1 K04752 glnK; nitrogen regulatory protein P-II 2
D RD2015_1409 transcription accessory protein K06959 tex; protein Tex
C 99974 Translation
D RD2015_2700 mRNA 3'-end processing factor K07576 K07576; metallo-beta-lactamase family protein
D RD2015_2743 exonuclease K07577 K07577; putative mRNA 3-end processing factor
C 99975 Protein processing
D RD2015_3270 ATP-dependent Clp protease ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D RD2015_1453 trigger factor K03545 tig; trigger factor
D RD2015_4265 sulfite oxidase K17247 msrQ; methionine sulfoxide reductase heme-binding subunit
D RD2015_3453 FdhE-like protein K02380 fdhE; FdhE protein
D RD2015_3768 Urease accessory protein UreE K03187 ureE; urease accessory protein
D RD2015_3767 urease accessory protein UreF K03188 ureF; urease accessory protein
D RD2015_3766 urease accessory protein UreG K03189 ureG; urease accessory protein
D RD2015_3784 urease accessory protein ureD K03190 ureD; urease accessory protein
D RD2015_3771 Putative urease accessory protein UreJ/HupE K03192 ureJ; urease accessory protein
D RD2015_3362 SsrA-binding protein K03664 smpB; SsrA-binding protein
D RD2015_373 Mg chelatase, subunit ChlI K07391 comM; magnesium chelatase family protein
D RD2015_3321 hypothetical protein K07394 K07394; SM-20-related protein
D RD2015_221 peptidase K07395 K07395; putative proteasome-type protease
D RD2015_956 Peroxiredoxin K07397 yhfA; putative redox protein
D RD2015_3230 OsmC-like protein K07397 yhfA; putative redox protein
D RD2015_4262 cytochrome C biogenesis protein ResB K07399 resB; cytochrome c biogenesis protein
D RD2015_1324 Xanthine dehydrogenase accessory protein XdhC K07402 xdhC; xanthine dehydrogenase accessory factor
D RD2015_304 Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family K07402 xdhC; xanthine dehydrogenase accessory factor
D RD2015_4602 Glutathione S-transferase-like protein K11208 yncG; GST-like protein
C 99976 Replication and repair
D RD2015_3694 DNA repair protein K03630 radC; DNA repair protein RadC
D RD2015_3891 hypothetical protein K09760 rmuC; DNA recombination protein RmuC
D RD2015_924 hypothetical protein K07460 yraN; putative endonuclease
D RD2015_604 DNA processing protein DprA K04096 smf; DNA processing protein
D RD2015_2218 Terminase small subunit K07474 xtmA; phage terminase small subunit
D RD2015_1988 recombination factor protein RarA K07478 ycaJ; putative ATPase
D RD2015_3287 Transposase DDE domain protein K07481 K07481; transposase, IS5 family
D RD2015_4252 transposase K07483 K07483; transposase
D RD2015_1429 Ispsy11, transposase orfa K07483 K07483; transposase
D RD2015_4628 Ispsy11, transposase orfa K07483 K07483; transposase
D RD2015_161 Ispsy11, transposase orfa K07483 K07483; transposase
D RD2015_1114 Transposase K07483 K07483; transposase
D RD2015_976 Transposase IS200-like protein K07491 rayT; REP-associated tyrosine transposase
D RD2015_4271 Transposase K07491 rayT; REP-associated tyrosine transposase
D RD2015_128 transposase K07497 K07497; putative transposase
D RD2015_129 Transposase IS3/IS911 family protein K07497 K07497; putative transposase
D RD2015_160 Integrase catalytic subunit K07497 K07497; putative transposase
D RD2015_2852 transposase K07497 K07497; putative transposase
D RD2015_2853 Transposase IS3/IS911 family protein K07497 K07497; putative transposase
D RD2015_1430 Integrase catalytic subunit K07497 K07497; putative transposase
D RD2015_4627 Integrase catalytic subunit K07497 K07497; putative transposase
D RD2015_4253 integrase K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D RD2015_3747 Nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D RD2015_2159 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D RD2015_4724 peptide transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D RD2015_4006 Oligopeptide transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D RD2015_3626 inorganic phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family
D RD2015_3830 sodium:solute symporter K03307 TC.SSS; solute:Na+ symporter, SSS family
C 99978 Cell growth
D RD2015_1380 putative intracellular septation protein A K06190 ispZ; intracellular septation protein
D RD2015_104 SpoVR family protein K06415 spoVR; stage V sporulation protein R
C 99993 Cell motility
D RD2015_650 Regulator of competence-specific genes-like protein K07343 tfoX; DNA transformation protein and related proteins
C 99995 Signaling proteins
D RD2015_586 hypothetical protein K03607 proQ; ProP effector
D RD2015_3594 carbon starvation protein A K06200 cstA; carbon starvation protein
D RD2015_2907 GTP-binding protein TypA K06207 typA; GTP-binding protein
D RD2015_2462 transcriptional regulator K07167 chrR; putative transcriptional regulator
D RD2015_136 CBS domain containing membrane protein K07168 K07168; CBS domain-containing membrane protein
D RD2015_2639 FHA domain containing protein K07169 K07169; FHA domain-containing protein
D RD2015_4460 phosphate starvation protein PhoH K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D RD2015_3035 PhoH family protein K07175 phoH2; PhoH-like ATPase
D RD2015_106 Putative Ser protein kinase K07180 prkA; serine protein kinase
D RD2015_267 protein kinase K08482 kaiC; circadian clock protein KaiC
D RD2015_3273 circadian clock protein KaiC K08482 kaiC; circadian clock protein KaiC
D RD2015_3576 nucleotide-binding protein K09767 yajQ; cyclic-di-GMP-binding protein
C 99992 Structural proteins
D RD2015_1987 membrane protein K03634 lolA; outer membrane lipoprotein carrier protein
D RD2015_1099 Outer-membrane lipoprotein LolB K02494 lolB; outer membrane lipoprotein LolB
D RD2015_988 Lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA
D RD2015_1167 17 kDa surface antigen K06077 slyB; outer membrane lipoprotein SlyB
D RD2015_1515 Outer membrane chaperone Skp (OmpH) K06142 hlpA; outer membrane protein
D RD2015_2124 Murein hydrolase activator NlpD K06194 nlpD; lipoprotein NlpD
D RD2015_637 Putative outer membrane protein W K07275 ompW; outer membrane protein
D RD2015_655 OmpW family protein K07275 ompW; outer membrane protein
D RD2015_709 hypothetical protein K07280 K07280; outer membrane protein
D RD2015_2164 Putative salt-induced outer membrane protein K07283 ydiY; putative salt-induced outer membrane protein
D RD2015_2409 AsmA K07290 yhjG; AsmA family protein
D RD2015_3241 RND transporter K02005 ABC.CD.TX; HlyD family secretion protein
D RD2015_4818 Inner membrane protein CreD K06143 creD; inner membrane protein
D RD2015_1488 hypothetical protein K15539 rodZ; cytoskeleton protein RodZ
D RD2015_1156 hypothetical protein K21695 aaeX; protein AaeX
C 99994 Others
D RD2015_2142 Phosphate-specific transport system accessory protein PhoU K02039 phoU; phosphate transport system protein
D RD2015_3984 BFD/(2Fe-2S)-binding domain-containing protein K02192 bfd; bacterioferritin-associated ferredoxin
D RD2015_4785 Putative periplasmic glucans biosynthesis signal peptide protein K03670 mdoG; periplasmic glucans biosynthesis protein
D RD2015_506 ApaG domain-containing protein K06195 apaG; ApaG protein
D RD2015_966 frataxin K06202 cyaY; iron-sulfur cluster assembly protein CyaY
D RD2015_3726 hemerythrin K07216 hr; hemerythrin
D RD2015_3988 hemin-degrading family protein K07225 hmuS; putative hemin transport protein
B
B 09194 Poorly characterized
C 99996 General function prediction only
D RD2015_2303 Putative membrane protein, required for colicin V production K03558 cvpA; membrane protein required for colicin V production
D RD2015_1871 Mammalian cell entry related domain protein K06192 pqiB; paraquat-inducible protein B
D RD2015_1399 Protein elaA K02348 elaA; ElaA protein
D RD2015_53 transport-associated protein K04065 osmY; hyperosmotically inducible periplasmic protein
D RD2015_57 Putative lipoprotein K04065 osmY; hyperosmotically inducible periplasmic protein
D RD2015_3698 Putative globin K06886 glbN; hemoglobin
D RD2015_4556 Globin K06886 glbN; hemoglobin
D RD2015_2922 oxidoreductase K06886 glbN; hemoglobin
D RD2015_2873 membrane protein K07001 K07001; NTE family protein
D RD2015_4259 patatin K07001 K07001; NTE family protein
D RD2015_2477 Patatin K07001 K07001; NTE family protein
D RD2015_3900 Putative exported phospholipase K07001 K07001; NTE family protein
D RD2015_4596 patatin K07001 K07001; NTE family protein
D RD2015_1847 Patatin K07001 K07001; NTE family protein
D RD2015_2968 Patatin K07001 K07001; NTE family protein
D RD2015_995 haloacid dehalogenase K07025 K07025; putative hydrolase of the HAD superfamily
D RD2015_1278 Pyridoxine 5'-phosphate phosphatase PdxP K07025 K07025; putative hydrolase of the HAD superfamily
D RD2015_934 iron--sulfur cluster insertion protein ErpA K15724 erpA; iron-sulfur cluster insertion protein
D RD2015_4230 Putative membrane protein K07058 K07058; membrane protein
D RD2015_2026 Ribonuclease BN K07058 K07058; membrane protein
D RD2015_2987 hypothetical protein K07058 K07058; membrane protein
D RD2015_3995 Ribonuclease BN K07058 K07058; membrane protein
D RD2015_1844 hypothetical protein K07146 K07146; UPF0176 protein
D RD2015_4807 sulfurtransferase K07146 K07146; UPF0176 protein
D RD2015_2128 GlcG protein K11477 glcG; glc operon protein GlcG
D RD2015_2389 NADPH-dependent FMN reductase K11811 arsH; arsenical resistance protein ArsH
D RD2015_3372 hypothetical protein K03744 lemA; LemA protein
D RD2015_431 LemA family protein K03744 lemA; LemA protein
D RD2015_4546 hypothetical protein K03744 lemA; LemA protein
D RD2015_1890 SlyX K03745 slyX; SlyX protein
D RD2015_603 Protein Smg-like protein K03747 smg; Smg protein
D RD2015_4416 CreA protein K05805 creA; CreA protein
D RD2015_2302 hypothetical protein K03749 dedD; DedD protein
D RD2015_3172 DedA protein K03975 dedA; membrane-associated protein
D RD2015_1869 Paraquat-inducible protein A K03808 pqiA; paraquat-inducible protein A
D RD2015_1870 paraquat-inducible protein A K03808 pqiA; paraquat-inducible protein A
D RD2015_4687 membrane protein K08972 K08972; putative membrane protein
D RD2015_4634 Putative membrane protein K08983 K08983; putative membrane protein
D RD2015_449 Membrane protein K08987 K08987; putative membrane protein
D RD2015_2433 Putative secreted protein K08995 K08995; putative membrane protein
D RD2015_1666 hypothetical protein K09858 K09858; SEC-C motif domain protein
D RD2015_3941 PhnA protein K06193 phnA; protein PhnA
C 99997 Function unknown
D RD2015_2619 hypothetical protein K06867 K06867; uncharacterized protein
D RD2015_3151 Ankyrin K06867 K06867; uncharacterized protein
D RD2015_3371 Ankyrin K06867 K06867; uncharacterized protein
D RD2015_430 membrane protein K06872 K06872; uncharacterized protein
D RD2015_1962 Hydrolase alpha/beta fold family K06889 K06889; uncharacterized protein
D RD2015_2593 GPW/gp25 family protein K06903 W; Bacteriophage baseplate protein W
D RD2015_2586 Phage tail sheath protein FI K06907 FI; Bacteriophage tail sheath protein
D RD2015_1281 ATPase AAA K06923 K06923; uncharacterized protein
D RD2015_3608 hypothetical protein K06938 K06938; uncharacterized protein
D RD2015_3194 Fe-S protein K06938 K06938; uncharacterized protein
D RD2015_3643 transposase K06940 K06940; uncharacterized protein
D RD2015_2547 hypothetical protein K06940 K06940; uncharacterized protein
D RD2015_115 Putative exported protein K06940 K06940; uncharacterized protein
D RD2015_4161 hypothetical protein K06950 K06950; uncharacterized protein
D RD2015_2740 DEAD/DEAH box helicase K06953 K06953; uncharacterized protein
D RD2015_2460 Amine oxidase K06954 K06954; uncharacterized protein
D RD2015_1557 Deacylase K06987 K06987; uncharacterized protein
D RD2015_1839 Succinylglutamate desuccinylase / Aspartoacylase family protein K06987 K06987; uncharacterized protein
D RD2015_369 dioxygenase K06991 K06991; uncharacterized protein
D RD2015_1582 glyoxalase K06996 K06996; uncharacterized protein
D RD2015_4137 esterase K07000 K07000; uncharacterized protein
D RD2015_440 FAD-binding oxidoreductase K07006 K07006; uncharacterized protein
D RD2015_4453 alpha/beta hydrolase K07018 K07018; uncharacterized protein
D RD2015_242 Alpha/beta hydrolase fold protein K07019 K07019; uncharacterized protein
D RD2015_198 hypothetical protein K07039 K07039; uncharacterized protein
D RD2015_4275 YecA family protein K07039 K07039; uncharacterized protein
D RD2015_2029 Amidohydrolase 2 K07045 K07045; uncharacterized protein
D RD2015_444 metalloprotease K07054 K07054; uncharacterized protein
D RD2015_4393 nucleotidyltransferase K07074 K07074; uncharacterized protein
D RD2015_4812 Sulfite exporter TauE/SafE K07090 K07090; uncharacterized protein
D RD2015_4169 permease K07090 K07090; uncharacterized protein
D RD2015_2160 phosphatase K07093 K07093; uncharacterized protein
D RD2015_4217 Putative phosphohydrolase K07098 K07098; uncharacterized protein
D RD2015_1501 nicotinate phosphoribosyltransferase K07101 K07101; uncharacterized protein
D RD2015_227 membrane protein K07112 K07112; uncharacterized protein
D RD2015_228 YeeE/YedE family protein K07112 K07112; uncharacterized protein
D RD2015_4535 Methyltransferase K07117 K07117; uncharacterized protein
D RD2015_2318 Putative restriction endonuclease K07117 K07117; uncharacterized protein
D RD2015_1689 Putative restriction endonuclease K07117 K07117; uncharacterized protein
D RD2015_178 Putative NADH-flavin reductase K07118 K07118; uncharacterized protein
D RD2015_2324 AraC family transcriptional regulator K07124 K07124; uncharacterized protein
D RD2015_4449 TPR repeat protein, SEL1 subfamily K07126 K07126; uncharacterized protein
D RD2015_2289 FAD dependent oxidoreductase K07137 K07137; uncharacterized protein
D RD2015_1062 hypothetical protein K07148 K07148; uncharacterized protein
D RD2015_4843 Putative membrane protein insertion efficiency factor K08998 K08998; uncharacterized protein
D RD2015_1995 GatB/YqeY domain-containing protein K09117 K09117; uncharacterized protein
D RD2015_4450 hypothetical protein K09158 K09158; uncharacterized protein
D RD2015_2896 Putative N(omega)-hydroxy-L-arginine synthase DcsA K09190 K09190; uncharacterized protein
D RD2015_305 hypothetical protein K09386 K09386; uncharacterized protein
D RD2015_2459 hypothetical protein K09701 K09701; uncharacterized protein
D RD2015_105 hypothetical protein K09786 K09786; uncharacterized protein
D RD2015_3728 hypothetical protein K09790 K09790; uncharacterized protein
D RD2015_3312 hypothetical protein K09791 K09791; uncharacterized protein
D RD2015_3297 Membrane-bounded cytochrome biogenesis DsbD/cycZ-like domain K09792 K09792; uncharacterized protein
D RD2015_3360 Protein RnfH K09801 K09801; uncharacterized protein
D RD2015_4237 hypothetical protein K09822 K09822; uncharacterized protein
D RD2015_1872 hypothetical protein K09857 K09857; uncharacterized protein
D RD2015_2106 hypothetical protein K09861 K09861; uncharacterized protein
D RD2015_3228 hypothetical protein K09915 K09915; uncharacterized protein
D RD2015_669 hypothetical protein K09921 K09921; uncharacterized protein
D RD2015_190 hypothetical protein K09924 K09924; uncharacterized protein
D RD2015_1864 hypothetical protein K09924 K09924; uncharacterized protein
D RD2015_3299 hypothetical protein K09926 K09926; uncharacterized protein
D RD2015_664 Putative cytoplasmic protein K09927 K09927; uncharacterized protein
D RD2015_1377 hypothetical protein K09928 K09928; uncharacterized protein
D RD2015_1697 hypothetical protein K09930 K09930; uncharacterized protein
D RD2015_1498 hypothetical protein K09937 K09937; uncharacterized protein
D RD2015_4683 Putative membrane protein K09939 K09939; uncharacterized protein
D RD2015_873 hypothetical protein K09941 K09941; uncharacterized protein
D RD2015_4215 50S ribosomal protein L21 K09958 K09958; uncharacterized protein
D RD2015_1826 hypothetical protein K09962 K09962; uncharacterized protein
D RD2015_360 hypothetical protein K09973 K09973; uncharacterized protein
D RD2015_3814 hypothetical protein K09975 K09975; uncharacterized protein
D RD2015_1801 hypothetical protein K09983 K09983; uncharacterized protein
D RD2015_382 hypothetical protein K09984 K09984; uncharacterized protein
D RD2015_3790 von Willebrand factor A K09989 K09989; uncharacterized protein
D RD2015_3627 Phosphate transport regulator related to PhoU K07220 K07220; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: September 20, 2024