+E Ribosome biogenesis KO #

  Ribosome Biogenesis - Rhodococcus erythropolis BG43

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AEukaryotic type B Sno RNPs C Box C/D snoRNPs C Box H/ACA snoRNPs B 90S particles C U3 small nucleolar RNA-associated proteins C Helicases C GTPase C RNase D XU06_11620 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] C Kinase C Other 90S particles B Pre-40S particles C Kinases C Export and cytoplasmic maturation factors C Other pre-40S particles B Pre-60S particles C Helicases C GTPases C RNases D XU06_18065 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D RNase MRP C Kinases C Export and cytoplasmic maturation factors C 5-FMC complex C Ribosome quality control proteins C Other pre-60S particles B Other ribosome biogenesis factors C XU06_17410 GTPase Era K03595 era; GTPase C XU06_17715 obgE; GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-] # AProkaryotic type B Sno RNPs C Box C/D snoRNPs C Box H/ACA snoRNPs B rRNA transcription factors C XU06_12275 transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA C XU06_13925 antitermination protein NusB K03625 nusB; transcription antitermination protein NusB C XU06_08460 antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG B rRNA modification factors C 16S rRNA modification factors D XU06_20620 16S rRNA methyltransferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D XU06_14020 methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D XU06_20150 SAM-dependent methyltransferase K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172] D XU06_11600 methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D XU06_17450 ribosomal RNA small subunit methyltransferase E K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D XU06_29250 ribosomal RNA small subunit methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D XU06_16535 ribosomal RNA small subunit methyltransferase H K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D XU06_20665 16S rRNA methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D XU06_15280 cytochrome C peroxidase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] C 23S rRNA modification factors D XU06_19600 methyltransferase type 11 K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187] D XU06_03580 rRNA methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D XU06_11875 ribosomal RNA large subunit methyltransferase N K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D XU06_15280 cytochrome C peroxidase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D XU06_19885 pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D XU06_22640 pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D XU06_14860 pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D XU06_15225 pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D XU06_16400 pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] B ribosomal protein modification factors C XU06_09415 alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] C XU06_20760 GCN5 family acetyltransferase K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267] C XU06_11690 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM C XU06_00550 hypothetical protein K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor C XU06_00555 hypothetical protein K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor B rRNA processing factors C XU06_11620 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] C XU06_17730 ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] C XU06_13865 Holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] B rRNA helicases C XU06_19260 cold-shock protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] B GTPases C XU06_17410 GTPase Era K03595 era; GTPase C XU06_10650 GTPase EngC K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] C XU06_01310 GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] C XU06_15215 engA; GTP-binding protein Der K03977 engA; GTPase C XU06_17715 obgE; GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-] C XU06_12940 ATP-binding protein K03665 hflX; GTPase B Other maturation factors C XU06_18355 hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] C XU06_13590 GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] C XU06_12290 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A C XU06_12270 ribosome maturation protein RimP K09748 rimP; ribosome maturation factor RimP C XU06_00345 RNA-binding protein S4 K14761 rlbA; ribosome-associated protein C XU06_17630 Iojap family protein K09710 ybeB; ribosome-associated protein C XU06_17420 heat-shock protein K07042 ybeY; probable rRNA maturation factor C XU06_19915 GTP-binding protein K06942 ychF; ribosome-binding ATPase C XU06_11615 hypothetical protein K07040 yceD; DUF177 domain-containing protein # ARelated small nucleolar RNAs B Box C/D snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for 2'-O-ribose methylation B Box H/ACA snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for pseudouridynation B Other snoRNA ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 22, 2024