+D GENES KO #

  KEGG Orthology (KO) - Rhodococcoides fascians D188

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:rfa00010] D A3L23_01402 nanK; N-acetylmannosamine kinase K25026 glk; glucokinase [EC:2.7.1.2] D A3L23_03923 glkA; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D A3L23_00618 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D A3L23_04741 pfkA; ATP-dependent 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D A3L23_03017 glpX; Fructose-1,6-bisphosphatase class 2 K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D A3L23_00913 fba_1; Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D A3L23_02579 fba_2; Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D A3L23_04349 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D A3L23_04351 gapA; Glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D A3L23_04350 pgk; Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D A3L23_02793 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D A3L23_01019 pspA_3; Phosphoserine phosphatase 1 K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D A3L23_01027 pspA_4; Phosphoserine phosphatase 1 K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D A3L23_00498 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D A3L23_04029 pyk; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D A3L23_01009 ppdK; Pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D A3L23_01325 aceE_1; Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D A3L23_03837 aceE_2; Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D A3L23_01014 pdhC_2; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D A3L23_03888 dlaT; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D A3L23_01025 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D A3L23_02243 pdhD; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D A3L23_02724 lpdC; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D A3L23_01149 adhT_1; Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D A3L23_02749 adhC2; NADP-dependent alcohol dehydrogenase C 2 K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D A3L23_01007 ald_1; 3-succinoylsemialdehyde-pyridine dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D A3L23_01358 Putative aldehyde dehydrogenase K00129 ALDH3; aldehyde dehydrogenase (NAD(P)+) [EC:1.2.1.5] D A3L23_00286 thcA; EPTC-inducible aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-] D A3L23_01437 acsA_3; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D A3L23_02401 acsA_4; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D A3L23_00418 galM_1; Aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D A3L23_00699 galM_2; Aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D A3L23_04800 pgm; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D A3L23_04478 ppgK; Polyphosphate glucokinase K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63] D A3L23_01403 pckG; Phosphoenolpyruvate carboxykinase K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] D A3L23_03243 crr; Glucose-specific phosphotransferase enzyme IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] C 00020 Citrate cycle (TCA cycle) [PATH:rfa00020] D A3L23_00697 gltA2; Citrate synthase 1 K01647 CS; citrate synthase [EC:2.3.3.1] D A3L23_00702 citA; Putative citrate synthase 2 K01647 CS; citrate synthase [EC:2.3.3.1] D A3L23_04322 acnA; Aconitate hydratase K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D A3L23_03351 icd; Isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D A3L23_03146 kgd; Multifunctional 2-oxoglutarate metabolism enzyme K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61] D A3L23_01025 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D A3L23_02243 pdhD; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D A3L23_02724 lpdC; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D A3L23_00611 sucD; Succinyl-CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D A3L23_00612 sucC; Succinyl-CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D A3L23_00132 sdhA; Succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D A3L23_00133 sdhB; Succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D A3L23_00130 sdhC; Succinate dehydrogenase 2 membrane subunit SdhC K00241 sdhC; succinate dehydrogenase cytochrome b subunit D A3L23_00131 hypothetical protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D A3L23_03016 fumC; Fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D A3L23_04637 mqo; putative malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4] D A3L23_00996 cfiB_1; 2-oxoglutarate carboxylase small subunit K01958 PC; pyruvate carboxylase [EC:6.4.1.1] D A3L23_04703 cfiB_2; 2-oxoglutarate carboxylase small subunit K01958 PC; pyruvate carboxylase [EC:6.4.1.1] D A3L23_01403 pckG; Phosphoenolpyruvate carboxykinase K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] D A3L23_01325 aceE_1; Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D A3L23_03837 aceE_2; Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D A3L23_01014 pdhC_2; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D A3L23_03888 dlaT; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] C 00030 Pentose phosphate pathway [PATH:rfa00030] D A3L23_00618 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D A3L23_02715 zwf; Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D A3L23_04344 zwf2; Glucose-6-phosphate 1-dehydrogenase 2 K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D A3L23_04552 zwf1_2; Glucose-6-phosphate 1-dehydrogenase 1 K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D A3L23_04346 pgl; 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31] D A3L23_01821 gntZ; 6-phosphogluconate dehydrogenase, NAD(+)-dependent, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D A3L23_04188 gndA; 6-phosphogluconate dehydrogenase, NADP(+)-dependent, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D A3L23_04361 rpe; Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D A3L23_01712 fas2_1; Ferredoxin fas2 K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D A3L23_04342 tkt; Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D A3L23_04943 fas2_2; Ferredoxin fas2 K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D A3L23_04343 tal; Transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D A3L23_03702 rpiB; Ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D A3L23_01142 xpkA; Xylulose-5-phosphate phosphoketolase K01621 xfp; xylulose-5-phosphate/fructose-6-phosphate phosphoketolase [EC:4.1.2.9 4.1.2.22] D A3L23_02763 deoC; Deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4] D A3L23_03746 rbsK_2; Ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15] D A3L23_04800 pgm; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D A3L23_00512 prs; Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D A3L23_01338 eda; KHG/KDPG aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D A3L23_03555 kdgA; KHG/KDPG aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D A3L23_02548 gntK; Thermoresistant gluconokinase K00851 idnK; gluconokinase [EC:2.7.1.12] D A3L23_01340 kdgK_2; 2-dehydro-3-deoxygluconokinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45] D A3L23_03558 kdgK_3; 2-dehydro-3-deoxygluconokinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45] D A3L23_00913 fba_1; Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D A3L23_02579 fba_2; Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D A3L23_03017 glpX; Fructose-1,6-bisphosphatase class 2 K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D A3L23_04741 pfkA; ATP-dependent 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] C 00040 Pentose and glucuronate interconversions [PATH:rfa00040] D A3L23_01341 D-mannonate dehydratase K08323 rspA; mannonate dehydratase [EC:4.2.1.8] D A3L23_03647 D-galactonate dehydratase family member K08323 rspA; mannonate dehydratase [EC:4.2.1.8] D A3L23_01339 por_1; Polyol:NADP oxidoreductase K00040 uxuB; fructuronate reductase [EC:1.1.1.57] D A3L23_03648 por_2; Polyol:NADP oxidoreductase K00040 uxuB; fructuronate reductase [EC:1.1.1.57] D A3L23_01254 ywqF; UDP-glucose 6-dehydrogenase YwqF K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D A3L23_00567 gtaB; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D A3L23_00425 ulaF; L-ribulose-5-phosphate 4-epimerase UlaF K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4] D A3L23_04361 rpe; Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D A3L23_00426 araA_1; L-arabinose isomerase K01804 araA; L-arabinose isomerase [EC:5.3.1.4] D A3L23_00424 araB; Ribulokinase K00853 araB; L-ribulokinase [EC:2.7.1.16] D A3L23_01480 xylB_2; Xylulose kinase K00854 xylB; xylulokinase [EC:2.7.1.17] D A3L23_01342 gutB_2; Sorbitol dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14] D A3L23_01444 gutB_3; Sorbitol dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14] D A3L23_03385 gutB_4; Sorbitol dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14] D A3L23_01460 Alpha-ketoglutaric semialdehyde dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26] D A3L23_02181 fucA; L-fuculose phosphate aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17] C 00051 Fructose and mannose metabolism [PATH:rfa00051] D A3L23_00698 kdgK_1; 2-dehydro-3-deoxygluconokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D A3L23_00041 manA; Mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D A3L23_00043 algC; Phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D A3L23_00113 putative phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D A3L23_00050 hddC; D-glycero-alpha-D-manno-heptose 1-phosphate guanylyltransferase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D A3L23_02181 fucA; L-fuculose phosphate aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17] D A3L23_04741 pfkA; ATP-dependent 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D A3L23_03017 glpX; Fructose-1,6-bisphosphatase class 2 K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D A3L23_02449 lacC; Tagatose-6-phosphate kinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] D A3L23_04515 pfkB; ATP-dependent 6-phosphofructokinase isozyme 2 K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] D A3L23_01342 gutB_2; Sorbitol dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14] D A3L23_01444 gutB_3; Sorbitol dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14] D A3L23_03385 gutB_4; Sorbitol dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14] D A3L23_01445 mtlK_1; Mannitol 2-dehydrogenase K00045 mtlK; mannitol 2-dehydrogenase [EC:1.1.1.67] D A3L23_03510 mtlK_2; Mannitol 2-dehydrogenase K00045 mtlK; mannitol 2-dehydrogenase [EC:1.1.1.67] D A3L23_00913 fba_1; Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D A3L23_02579 fba_2; Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D A3L23_04349 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D A3L23_03702 rpiB; Ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D A3L23_04516 fruA; PTS system fructose-specific EIIABC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] C 00052 Galactose metabolism [PATH:rfa00052] D A3L23_00418 galM_1; Aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D A3L23_00699 galM_2; Aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D A3L23_01924 galK; Galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D A3L23_01923 galT; Galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] D A3L23_02804 galE_1; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D A3L23_04492 galE_2; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D A3L23_00567 gtaB; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D A3L23_04800 pgm; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D A3L23_01402 nanK; N-acetylmannosamine kinase K25026 glk; glucokinase [EC:2.7.1.2] D A3L23_03923 glkA; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D A3L23_02020 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D A3L23_00426 araA_1; L-arabinose isomerase K01804 araA; L-arabinose isomerase [EC:5.3.1.4] D A3L23_04741 pfkA; ATP-dependent 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D A3L23_03692 malL; Oligo-1,6-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] C 00053 Ascorbate and aldarate metabolism [PATH:rfa00053] D A3L23_01254 ywqF; UDP-glucose 6-dehydrogenase YwqF K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D A3L23_00425 ulaF; L-ribulose-5-phosphate 4-epimerase UlaF K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4] D A3L23_01007 ald_1; 3-succinoylsemialdehyde-pyridine dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D A3L23_01459 gudD_1; Glucarate dehydratase K01706 gudD; glucarate dehydratase [EC:4.2.1.40] D A3L23_01462 gudD_2; Glucarate dehydratase K01706 gudD; glucarate dehydratase [EC:4.2.1.40] D A3L23_01460 Alpha-ketoglutaric semialdehyde dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26] D A3L23_01461 putative 5-dehydro-4-deoxyglucarate dehydratase K01707 kdgD; 5-dehydro-4-deoxyglucarate dehydratase [EC:4.2.1.41] D A3L23_01457 L-talarate/galactarate dehydratase K20023 talrD-galrD; L-talarate/galactarate dehydratase [EC:4.2.1.156 4.2.1.42] D A3L23_01449 udh; Uronate dehydrogenase K18981 udh; uronate dehydrogenase [EC:1.1.1.203] C 00500 Starch and sucrose metabolism [PATH:rfa00500] D A3L23_03692 malL; Oligo-1,6-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D A3L23_03053 ams; Amylosucrase K05341 ams; amylosucrase [EC:2.4.1.4] D A3L23_00567 gtaB; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D A3L23_03110 glgC; Glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D A3L23_04762 Glycogen synthase K16150 K16150; glycogen synthase [EC:2.4.1.11] D A3L23_03572 glgB; 1,4-alpha-glucan branching enzyme GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D A3L23_04761 putative 1,4-alpha-glucan branching enzyme K16149 K16149; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D A3L23_03574 glgP; Glycogen phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D A3L23_01609 nplT; Neopullulanase K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135] D A3L23_03725 malQ; 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25] D A3L23_01501 mak1; Maltokinase K16146 pep2; maltokinase [EC:2.7.1.175] D A3L23_03573 glgE; Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase K16147 glgE; starch synthase (maltosyl-transferring) [EC:2.4.99.16] D A3L23_03109 glgA; Capsular glucan synthase K16148 glgM; alpha-maltose-1-phosphate synthase [EC:2.4.1.342] D A3L23_03243 crr; Glucose-specific phosphotransferase enzyme IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D A3L23_02211 hypothetical protein K01214 ISA; isoamylase [EC:3.2.1.68] D A3L23_03978 hypothetical protein K01214 ISA; isoamylase [EC:3.2.1.68] D A3L23_04770 hypothetical protein K01214 ISA; isoamylase [EC:3.2.1.68] D A3L23_03977 treY; Putative maltooligosyl trehalose synthase K06044 treY; (1->4)-alpha-D-glucan 1-alpha-D-glucosylmutase [EC:5.4.99.15] D A3L23_03976 treZ; Malto-oligosyltrehalose trehalohydrolase K01236 treZ; maltooligosyltrehalose trehalohydrolase [EC:3.2.1.141] D A3L23_01061 otsA; Trehalose-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347] D A3L23_03776 Trehalase K22934 E3.2.1.28; alpha,alpha-trehalase [EC:3.2.1.28] D A3L23_04800 pgm; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D A3L23_01402 nanK; N-acetylmannosamine kinase K25026 glk; glucokinase [EC:2.7.1.2] D A3L23_03923 glkA; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D A3L23_00618 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D A3L23_00698 kdgK_1; 2-dehydro-3-deoxygluconokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] C 00620 Pyruvate metabolism [PATH:rfa00620] D A3L23_01437 acsA_3; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D A3L23_02401 acsA_4; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D A3L23_01325 aceE_1; Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D A3L23_03837 aceE_2; Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D A3L23_01014 pdhC_2; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D A3L23_03888 dlaT; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D A3L23_01025 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D A3L23_02243 pdhD; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D A3L23_02724 lpdC; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D A3L23_01149 adhT_1; Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D A3L23_02749 adhC2; NADP-dependent alcohol dehydrogenase C 2 K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D A3L23_02647 ackA; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D A3L23_02646 pta; Phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D A3L23_04029 pyk; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D A3L23_00018 Biotinylated protein TB7.3 K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D A3L23_00076 accC_1; Biotin carboxylase K11263 bccA; acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14] D A3L23_00378 accC_2; Biotin carboxylase K11263 bccA; acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14] D A3L23_03832 accD6; putative propionyl-CoA carboxylase beta chain 6 K18472 accD6; acetyl-CoA/propionyl-CoA carboxylase carboxyl transferase subunit [EC:6.4.1.2 6.4.1.3 2.1.3.15] D A3L23_04693 acyP; Acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D A3L23_01007 ald_1; 3-succinoylsemialdehyde-pyridine dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D A3L23_00286 thcA; EPTC-inducible aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-] D A3L23_00295 mftD_1; Putative mycofactocin system heme/flavin oxidoreductase MftD K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3] D A3L23_00455 lldD_1; Putative L-lactate dehydrogenase K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3] D A3L23_02415 lldD_2; Putative L-lactate dehydrogenase K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3] D A3L23_03303 poxB; Pyruvate dehydrogenase K00156 poxB; pyruvate dehydrogenase (quinone) [EC:1.2.5.1] D A3L23_01610 Lactate 2-monooxygenase K00467 E1.13.12.4; lactate 2-monooxygenase [EC:1.13.12.4] D A3L23_02934 hypothetical protein K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D A3L23_04403 putative metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D A3L23_03136 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D A3L23_00996 cfiB_1; 2-oxoglutarate carboxylase small subunit K01958 PC; pyruvate carboxylase [EC:6.4.1.1] D A3L23_04703 cfiB_2; 2-oxoglutarate carboxylase small subunit K01958 PC; pyruvate carboxylase [EC:6.4.1.1] D A3L23_04637 mqo; putative malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4] D A3L23_03016 fumC; Fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D A3L23_04347 ppc; Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D A3L23_01403 pckG; Phosphoenolpyruvate carboxykinase K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] D A3L23_01009 ppdK; Pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D A3L23_04180 glcB_2; Malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9] D A3L23_00314 fadA_1; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A3L23_01384 fadI; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A3L23_02150 hypothetical protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A3L23_02333 fadA_2; Putative acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A3L23_02960 putative acetyl-CoA acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A3L23_03568 putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A3L23_03716 pcaF; Beta-ketoadipyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A3L23_01288 leuA_1; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D A3L23_02360 leuA_3; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:rfa00630] D A3L23_02746 aceA; Isocitrate lyase K01637 ICL; isocitrate/methylisocitrate lyase [EC:4.1.3.1 4.1.3.30] D A3L23_04180 glcB_2; Malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9] D A3L23_00697 gltA2; Citrate synthase 1 K01647 CS; citrate synthase [EC:2.3.3.1] D A3L23_00702 citA; Putative citrate synthase 2 K01647 CS; citrate synthase [EC:2.3.3.1] D A3L23_04322 acnA; Aconitate hydratase K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D A3L23_01437 acsA_3; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D A3L23_02401 acsA_4; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D A3L23_00314 fadA_1; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A3L23_01384 fadI; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A3L23_02150 hypothetical protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A3L23_02333 fadA_2; Putative acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A3L23_02960 putative acetyl-CoA acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A3L23_03568 putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A3L23_03716 pcaF; Beta-ketoadipyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A3L23_03567 hypothetical protein K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D A3L23_04987 hypothetical protein K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D A3L23_00076 accC_1; Biotin carboxylase K11263 bccA; acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14] D A3L23_00378 accC_2; Biotin carboxylase K11263 bccA; acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14] D A3L23_00063 accD5_1; putative propionyl-CoA carboxylase beta chain 5 K27094 accD5; propionyl-CoA/long-chain acyl-CoA carboxylase carboxyl transferase subunit [EC:6.4.1.3 6.4.1.- 2.1.3.15] D A3L23_00380 accD5_2; putative propionyl-CoA carboxylase beta chain 5 K27094 accD5; propionyl-CoA/long-chain acyl-CoA carboxylase carboxyl transferase subunit [EC:6.4.1.3 6.4.1.- 2.1.3.15] D A3L23_03832 accD6; putative propionyl-CoA carboxylase beta chain 6 K18472 accD6; acetyl-CoA/propionyl-CoA carboxylase carboxyl transferase subunit [EC:6.4.1.2 6.4.1.3 2.1.3.15] D A3L23_04304 mutB; putative methylmalonyl-CoA mutase large subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D A3L23_04306 mutA_2; putative methylmalonyl-CoA mutase small subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D A3L23_04985 scpA_3; Methylmalonyl-CoA mutase K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2] D A3L23_04980 scpA_2; Methylmalonyl-CoA mutase K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2] D A3L23_02235 putative FAD-linked oxidoreductase K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14] D A3L23_03049 putative FAD-linked oxidoreductase K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14] D A3L23_03231 putative FAD-linked oxidoreductase K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14] D A3L23_01296 katE; Catalase HPII K03781 katE; catalase [EC:1.11.1.6] D A3L23_02373 katA; Catalase K03781 katE; catalase [EC:1.11.1.6] D A3L23_00629 Putative 2-hydroxyacid dehydrogenase K00015 gyaR; glyoxylate reductase [EC:1.1.1.26] D A3L23_03860 5'-nucleotidase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D A3L23_00105 lysN_1; 2-aminoadipate transaminase K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-] D A3L23_03752 lysN_4; 2-aminoadipate transaminase K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-] D A3L23_00239 gms; Glutamate--methylamine ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D A3L23_00882 glnA_1; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D A3L23_03876 glnA_2; putative glutamine synthetase 2 K01915 glnA; glutamine synthetase [EC:6.3.1.2] D A3L23_03882 glnA_3; Glutamine synthetase 1 K01915 glnA; glutamine synthetase [EC:6.3.1.2] D A3L23_02144 glyA2; Serine hydroxymethyltransferase 2 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D A3L23_03011 glyA1; Serine hydroxymethyltransferase 1 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D A3L23_04177 gcvP; putative glycine dehydrogenase (decarboxylating) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D A3L23_03891 gcvT_2; Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D A3L23_01025 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D A3L23_02243 pdhD; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D A3L23_02724 lpdC; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D A3L23_02138 gcvH_1; Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D A3L23_04172 gcvH_2; Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D A3L23_00272 garK_1; Glycerate 2-kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D A3L23_03466 garK_2; Glycerate 2-kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D A3L23_03897 garK_3; Glycerate 2-kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D A3L23_01338 eda; KHG/KDPG aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D A3L23_03555 kdgA; KHG/KDPG aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D A3L23_03146 kgd; Multifunctional 2-oxoglutarate metabolism enzyme K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61] D A3L23_01787 fdnI; Formate dehydrogenase, nitrate-inducible, cytochrome b556(Fdn) subunit K00127 fdoI; formate dehydrogenase subunit gamma D A3L23_02136 purU_1; Formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D A3L23_02761 purU_2; Formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D A3L23_01936 amdA; Acetamidase K01455 fmdA; formamidase [EC:3.5.1.49] D A3L23_03309 amiF; Formamidase K28761 amiF; formamidase [EC:3.5.1.49] C 00640 Propanoate metabolism [PATH:rfa00640] D A3L23_01437 acsA_3; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D A3L23_02401 acsA_4; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D A3L23_00684 acsA_2; Acetyl-coenzyme A synthetase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17] D A3L23_02647 ackA; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D A3L23_02646 pta; Phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D A3L23_00327 bkdA_1; 3-methyl-2-oxobutanoate dehydrogenase subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D A3L23_02246 bkdA_2; 3-methyl-2-oxobutanoate dehydrogenase subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D A3L23_00326 bkdB_1; 3-methyl-2-oxobutanoate dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D A3L23_02245 bkdB_2; 3-methyl-2-oxobutanoate dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D A3L23_00325 pdhC_1; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D A3L23_02244 bkdC; Dihydrolipoyllysine-residue acyltransferase component of branched-chain alpha-ketoacid dehydrogenase complex K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D A3L23_01025 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D A3L23_02243 pdhD; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D A3L23_02724 lpdC; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D A3L23_02825 acrC_1; Acryloyl-CoA reductase (NADH) K00232 ACOX1_3; acyl-CoA oxidase [EC:1.3.3.6] D A3L23_03257 echA8_2; putative enoyl-CoA hydratase echA8 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D A3L23_04767 putative enoyl-CoA hydratase echA17 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D A3L23_02185 fadB_3; Fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D A3L23_02334 fadJ; Fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D A3L23_00018 Biotinylated protein TB7.3 K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D A3L23_00076 accC_1; Biotin carboxylase K11263 bccA; acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14] D A3L23_00378 accC_2; Biotin carboxylase K11263 bccA; acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14] D A3L23_03832 accD6; putative propionyl-CoA carboxylase beta chain 6 K18472 accD6; acetyl-CoA/propionyl-CoA carboxylase carboxyl transferase subunit [EC:6.4.1.2 6.4.1.3 2.1.3.15] D A3L23_03747 davT; 5-aminovalerate aminotransferase DavT K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D A3L23_00331 gabT_1; 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D A3L23_00063 accD5_1; putative propionyl-CoA carboxylase beta chain 5 K27094 accD5; propionyl-CoA/long-chain acyl-CoA carboxylase carboxyl transferase subunit [EC:6.4.1.3 6.4.1.- 2.1.3.15] D A3L23_00380 accD5_2; putative propionyl-CoA carboxylase beta chain 5 K27094 accD5; propionyl-CoA/long-chain acyl-CoA carboxylase carboxyl transferase subunit [EC:6.4.1.3 6.4.1.- 2.1.3.15] D A3L23_03567 hypothetical protein K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D A3L23_04987 hypothetical protein K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D A3L23_04304 mutB; putative methylmalonyl-CoA mutase large subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D A3L23_04306 mutA_2; putative methylmalonyl-CoA mutase small subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D A3L23_04985 scpA_3; Methylmalonyl-CoA mutase K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2] D A3L23_04980 scpA_2; Methylmalonyl-CoA mutase K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2] D A3L23_00612 sucC; Succinyl-CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D A3L23_00611 sucD; Succinyl-CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D A3L23_03253 bauC_1; Putative 3-oxopropanoate dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D A3L23_03854 bauC_2; Putative 3-oxopropanoate dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D A3L23_04322 acnA; Aconitate hydratase K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D A3L23_02746 aceA; Isocitrate lyase K01637 ICL; isocitrate/methylisocitrate lyase [EC:4.1.3.1 4.1.3.30] C 00650 Butanoate metabolism [PATH:rfa00650] D A3L23_00314 fadA_1; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A3L23_01384 fadI; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A3L23_02150 hypothetical protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A3L23_02333 fadA_2; Putative acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A3L23_02960 putative acetyl-CoA acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A3L23_03568 putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A3L23_03716 pcaF; Beta-ketoadipyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A3L23_00405 hbd_1; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D A3L23_01485 fadB2_1; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D A3L23_02227 hbd_2; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D A3L23_02747 fadB2_2; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D A3L23_02185 fadB_3; Fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D A3L23_02334 fadJ; Fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D A3L23_03257 echA8_2; putative enoyl-CoA hydratase echA8 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D A3L23_04767 putative enoyl-CoA hydratase echA17 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D A3L23_00132 sdhA; Succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D A3L23_00133 sdhB; Succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D A3L23_00130 sdhC; Succinate dehydrogenase 2 membrane subunit SdhC K00241 sdhC; succinate dehydrogenase cytochrome b subunit D A3L23_00131 hypothetical protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D A3L23_01795 gadA; Glutamate decarboxylase alpha K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D A3L23_03747 davT; 5-aminovalerate aminotransferase DavT K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D A3L23_00331 gabT_1; 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D A3L23_00330 sad_1; Succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D A3L23_00617 sad_2; Succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D A3L23_01955 gabD2; Putative succinate-semialdehyde dehydrogenase [NADP(+)] 2 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D A3L23_03349 gabD1; Succinate-semialdehyde dehydrogenase [NADP(+)] 1 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D A3L23_03749 sad_4; Succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D A3L23_00630 ccl; (R)-citramalyl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D A3L23_01259 yngG; Hydroxymethylglutaryl-CoA lyase YngG K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D A3L23_02453 scoA_1; putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5] D A3L23_03722 scoA_2; putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5] D A3L23_02452 scoB_1; putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] D A3L23_03723 scoB_2; putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] D A3L23_00279 acsA_1; Acetyl-coenzyme A synthetase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16] D A3L23_01022 bdhA_1; D-beta-hydroxybutyrate dehydrogenase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30] D A3L23_02321 bdhA_2; D-beta-hydroxybutyrate dehydrogenase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30] D A3L23_02108 mmoX; Methane monooxygenase component A alpha chain K18223 prmA; propane 2-monooxygenase large subunit [EC:1.14.13.227] D A3L23_02106 mmoY; Methane monooxygenase component A beta chain K18224 prmC; propane 2-monooxygenase small subunit [EC:1.14.13.227] D A3L23_02105 hypothetical protein K18226 prmD; propane monooxygenase coupling protein D A3L23_02107 mmoC; Methane monooxygenase component C K18225 prmB; propane monooxygenase reductase component [EC:1.18.1.-] D A3L23_02700 adhT_2; Alcohol dehydrogenase K18382 adh1; NAD+-dependent secondary alcohol dehydrogenase Adh1 [EC:1.1.1.-] D A3L23_04735 ilvB1; Acetolactate synthase large subunit IlvB1 K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D A3L23_04734 ilvH; Acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D A3L23_01000 gutB_1; Sorbitol dehydrogenase K00004 BDH; (R,R)-butanediol dehydrogenase / meso-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.4 1.1.1.- 1.1.1.303] D A3L23_02473 D-arabitol-phosphate dehydrogenase K00004 BDH; (R,R)-butanediol dehydrogenase / meso-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.4 1.1.1.- 1.1.1.303] D A3L23_03388 gutB_5; Sorbitol dehydrogenase K00004 BDH; (R,R)-butanediol dehydrogenase / meso-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.4 1.1.1.- 1.1.1.303] D A3L23_03391 gutB_6; Sorbitol dehydrogenase K00004 BDH; (R,R)-butanediol dehydrogenase / meso-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.4 1.1.1.- 1.1.1.303] D A3L23_02474 budC_1; Diacetyl reductase K03366 butA; meso-butanediol dehydrogenase / (S,S)-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.- 1.1.1.76 1.1.1.304] D A3L23_00999 xecD; 2-(R)-hydroxypropyl-CoM dehydrogenase K18009 budC; meso-butanediol dehydrogenase / (S,S)-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.- 1.1.1.76 1.1.1.304] D A3L23_04984 ccrA2; Crotonyl-CoA reductase K28720 divR; (2E)-2-enoyl-CoA carboxylase/reductase [EC:1.3.1.129] C 00660 C5-Branched dibasic acid metabolism [PATH:rfa00660] D A3L23_04735 ilvB1; Acetolactate synthase large subunit IlvB1 K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D A3L23_04734 ilvH; Acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D A3L23_00612 sucC; Succinyl-CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D A3L23_00611 sucD; Succinyl-CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D A3L23_03454 mch; Mesaconyl-CoA hydratase K18290 ich-Y; itaconyl-CoA hydratase [EC:4.2.1.56] D A3L23_01619 hacA; Homoaconitase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D A3L23_04721 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D A3L23_01618 dmdB; 2,3-dimethylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D A3L23_04720 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D A3L23_04048 hicd; Homoisocitrate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D A3L23_04731 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism [PATH:rfa00562] D A3L23_04014 impA; Inositol-1-monophosphatase ImpA K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D A3L23_04477 suhB; Inositol-1-monophosphatase SuhB K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D A3L23_01758 ino1; Inositol-3-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4] D A3L23_04423 pgsA; CDP-diacylglycerol--inositol 3-phosphatidyltransferase K27681 pgsA; phosphatidylinositol phosphate synthase [EC:2.7.8.-] D A3L23_03253 bauC_1; Putative 3-oxopropanoate dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D A3L23_03854 bauC_2; Putative 3-oxopropanoate dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D A3L23_04349 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] C 00566 Sulfoquinovose metabolism [PATH:rfa00566] D A3L23_02436 yihS; Sulfoquinovose isomerase K18479 yihS; sulfoquinovose isomerase [EC:5.3.1.31] D A3L23_03501 lacD2; Tagatose 1,6-diphosphate aldolase 2 K01671 yihT; sulfofructosephosphate aldolase [EC:4.1.2.57] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:rfa00190] D A3L23_04584 nuoA; NADH-quinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2] D A3L23_04583 nuoB; NADH-quinone oxidoreductase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2] D A3L23_04582 nuoC; NADH-quinone oxidoreductase subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2] D A3L23_04581 nuoD; NADH-quinone oxidoreductase subunit D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2] D A3L23_04580 nuoE; NADH-quinone oxidoreductase subunit E K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2] D A3L23_04579 nuoF; NADH-quinone oxidoreductase subunit F K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2] D A3L23_04578 nuoG; NADH-quinone oxidoreductase subunit G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2] D A3L23_04577 nuoH; NADH-quinone oxidoreductase subunit H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2] D A3L23_04576 nuoI; NADH-quinone oxidoreductase subunit I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2] D A3L23_04575 nuoJ; NADH-quinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2] D A3L23_04574 NADH-quinone oxidoreductase subunit 11 K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2] D A3L23_04573 nuoL; NADH-quinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2] D A3L23_04572 nuoM; NADH-quinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2] D A3L23_04571 nuoN; NADH-quinone oxidoreductase subunit N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2] D A3L23_01136 NADH dehydrogenase-like protein K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] D A3L23_02470 NADH dehydrogenase-like protein K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] D A3L23_02947 ndh; NADH dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] D A3L23_04205 NADH dehydrogenase-like protein K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] D A3L23_00132 sdhA; Succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D A3L23_00133 sdhB; Succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D A3L23_00130 sdhC; Succinate dehydrogenase 2 membrane subunit SdhC K00241 sdhC; succinate dehydrogenase cytochrome b subunit D A3L23_00131 hypothetical protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D A3L23_03906 qcrA; Ubiquinol-cytochrome c reductase iron-sulfur subunit K03890 qcrA; quinol---cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D A3L23_03905 qcrB; Ubiquinol-cytochrome c reductase cytochrome b subunit K03891 qcrB; quinol---cytochrome-c reductase cytochrome b subunit [EC:7.1.1.8] D A3L23_03907 qcrC; Ubiquinol-cytochrome c reductase cytochrome c subunit K03889 qcrC; quinol---cytochrome-c reductase cytochrome c subunit [EC:7.1.1.8] D A3L23_04341 ctaB; Protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D A3L23_03902 ctaF; Cytochrome c oxidase polypeptide 4 K27109 ctaF; cytochrome c oxidase subunit IV [EC:7.1.1.9] D A3L23_03908 ctaE; putative cytochrome c oxidase subunit 3 K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9] D A3L23_04774 ctaD_1; putative cytochrome c oxidase subunit 1 K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9] D A3L23_05107 ctaD_2; putative cytochrome c oxidase subunit 1 K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9] D A3L23_03901 ctaC; Cytochrome c oxidase subunit 2 K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9] D A3L23_04338 ctaA; Heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9] D A3L23_00778 cydA; Cytochrome bd ubiquinol oxidase subunit 1 K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D A3L23_00777 cydB; Cytochrome bd-I ubiquinol oxidase subunit 2 K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D A3L23_03283 atpA; ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D A3L23_03285 atpD; ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D A3L23_03284 atpG; ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D A3L23_03282 atpH; ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D A3L23_03286 atpC; ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D A3L23_03279 atpB; ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a D A3L23_03281 atpF; ATP synthase subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b D A3L23_03280 atpE; ATP synthase subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c D A3L23_02501 ppa; Inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] D A3L23_04717 ppk; Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D A3L23_02718 hypothetical protein K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation by Calvin cycle [PATH:rfa00710] D A3L23_04350 pgk; Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D A3L23_04351 gapA; Glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D A3L23_00913 fba_1; Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D A3L23_02579 fba_2; Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D A3L23_03017 glpX; Fructose-1,6-bisphosphatase class 2 K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D A3L23_01712 fas2_1; Ferredoxin fas2 K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D A3L23_04342 tkt; Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D A3L23_04943 fas2_2; Ferredoxin fas2 K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D A3L23_03702 rpiB; Ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D A3L23_04349 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D A3L23_04361 rpe; Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D A3L23_04343 tal; Transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D A3L23_04347 ppc; Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D A3L23_01009 ppdK; Pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] C 00720 Other carbon fixation pathways [PATH:rfa00720] D A3L23_01009 ppdK; Pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D A3L23_04347 ppc; Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D A3L23_00996 cfiB_1; 2-oxoglutarate carboxylase small subunit K01958 PC; pyruvate carboxylase [EC:6.4.1.1] D A3L23_04703 cfiB_2; 2-oxoglutarate carboxylase small subunit K01958 PC; pyruvate carboxylase [EC:6.4.1.1] D A3L23_03016 fumC; Fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D A3L23_00132 sdhA; Succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D A3L23_00133 sdhB; Succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D A3L23_00130 sdhC; Succinate dehydrogenase 2 membrane subunit SdhC K00241 sdhC; succinate dehydrogenase cytochrome b subunit D A3L23_00131 hypothetical protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D A3L23_00611 sucD; Succinyl-CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D A3L23_00612 sucC; Succinyl-CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D A3L23_00314 fadA_1; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A3L23_01384 fadI; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A3L23_02150 hypothetical protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A3L23_02333 fadA_2; Putative acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A3L23_02960 putative acetyl-CoA acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A3L23_03568 putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A3L23_03716 pcaF; Beta-ketoadipyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A3L23_03351 icd; Isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D A3L23_04322 acnA; Aconitate hydratase K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D A3L23_00018 Biotinylated protein TB7.3 K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D A3L23_03567 hypothetical protein K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D A3L23_04987 hypothetical protein K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D A3L23_04304 mutB; putative methylmalonyl-CoA mutase large subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D A3L23_04306 mutA_2; putative methylmalonyl-CoA mutase small subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D A3L23_04980 scpA_2; Methylmalonyl-CoA mutase K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2] D A3L23_04985 scpA_3; Methylmalonyl-CoA mutase K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2] D A3L23_00154 folD_1; Bifunctional protein FolD protein K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D A3L23_02127 folD_2; Bifunctional protein FolD protein K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D A3L23_03934 metF; 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D A3L23_02646 pta; Phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D A3L23_02647 ackA; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D A3L23_01437 acsA_3; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D A3L23_02401 acsA_4; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] C 00680 Methane metabolism [PATH:rfa00680] D A3L23_00417 fdhA; Glutathione-independent formaldehyde dehydrogenase K00148 fdhA; glutathione-independent formaldehyde dehydrogenase [EC:1.2.1.46] D A3L23_00307 Methanol:N,N-dimethyl-4-nitrosoaniline oxidoreductase K17067 mdo; formaldehyde dismutase / methanol dehydrogenase [EC:1.2.98.1 1.1.99.37] D A3L23_01787 fdnI; Formate dehydrogenase, nitrate-inducible, cytochrome b556(Fdn) subunit K00127 fdoI; formate dehydrogenase subunit gamma D A3L23_02144 glyA2; Serine hydroxymethyltransferase 2 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D A3L23_03011 glyA1; Serine hydroxymethyltransferase 1 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D A3L23_00498 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D A3L23_04347 ppc; Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D A3L23_00913 fba_1; Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D A3L23_02579 fba_2; Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D A3L23_03017 glpX; Fructose-1,6-bisphosphatase class 2 K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D A3L23_04741 pfkA; ATP-dependent 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D A3L23_02647 ackA; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D A3L23_02646 pta; Phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D A3L23_01437 acsA_3; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D A3L23_02401 acsA_4; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D A3L23_02793 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D A3L23_01019 pspA_3; Phosphoserine phosphatase 1 K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D A3L23_01027 pspA_4; Phosphoserine phosphatase 1 K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D A3L23_04732 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D A3L23_00703 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D A3L23_04773 serB_2; Phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D A3L23_04591 comB; putative 2-phosphosulfolactate phosphatase K05979 comB; 2-phosphosulfolactate phosphatase [EC:3.1.3.71] D A3L23_03076 fbiC; FO synthase K11779 fbiC; FO synthase [EC:2.5.1.147 4.3.1.32] D A3L23_04716 cofC; 2-phospho-L-lactate guanylyltransferase K14941 cofC; 2-phospho-L-lactate/phosphoenolpyruvate guanylyltransferase [EC:2.7.7.68 2.7.7.105] D A3L23_00047 cofD; 2-phospho-L-lactate transferase K11212 cofD; LPPG:FO 2-phospho-L-lactate transferase [EC:2.7.8.28] D A3L23_00048 fbiB_1; Coenzyme F420:L-glutamate ligase K24998 fbiB; dehydro coenzyme F420 reductase / coenzyme F420-0:L-glutamate ligase / coenzyme F420-1:gamma-L-glutamate ligase [EC:1.3.8.17 6.3.2.31 6.3.2.34] C 00910 Nitrogen metabolism [PATH:rfa00910] D A3L23_01936 amdA; Acetamidase K01455 fmdA; formamidase [EC:3.5.1.49] D A3L23_03309 amiF; Formamidase K28761 amiF; formamidase [EC:3.5.1.49] D A3L23_04851 narK; Nitrate/nitrite transporter NarK K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D A3L23_04274 nasD_1; Nitrite reductase [NAD(P)H] K26139 nasD; nitrite reductase [NAD(P)H] large subunit [EC:1.7.1.4] D A3L23_04275 nasE; Assimilatory nitrite reductase [NAD(P)H] small subunit K26138 nasE; nitrite reductase [NAD(P)H] small subunit [EC:1.7.1.4] D A3L23_04850 nasD_2; Nitrite reductase [NAD(P)H] K00362 nirB; nitrite reductase (NADH) large subunit [EC:1.7.1.15] D A3L23_04849 nirD; Nitrite reductase (NADH) small subunit K00363 nirD; nitrite reductase (NADH) small subunit [EC:1.7.1.15] D A3L23_03775 Putative monooxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16] D A3L23_03689 gdh; NAD-specific glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D A3L23_03476 gdhA; NAD(P)-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D A3L23_00239 gms; Glutamate--methylamine ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D A3L23_00882 glnA_1; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D A3L23_03876 glnA_2; putative glutamine synthetase 2 K01915 glnA; glutamine synthetase [EC:6.3.1.2] D A3L23_03882 glnA_3; Glutamine synthetase 1 K01915 glnA; glutamine synthetase [EC:6.3.1.2] D A3L23_01850 gltB_1; Glutamate synthase [NADPH] large chain K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D A3L23_04027 gltB_2; Glutamate synthase [NADPH] large chain K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D A3L23_01851 gltD_1; Glutamate synthase [NADPH] small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D A3L23_04028 gltD_2; Glutamate synthase [NADPH] small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D A3L23_01730 dauA_4; C4-dicarboxylic acid transporter DauA K01673 cynT; carbonic anhydrase [EC:4.2.1.1] D A3L23_02528 mtcA2; Carbonic anhydrase 2 K01673 cynT; carbonic anhydrase [EC:4.2.1.1] D A3L23_04816 mtcA1; Beta-carbonic anhydrase 1 K01673 cynT; carbonic anhydrase [EC:4.2.1.1] C 00920 Sulfur metabolism [PATH:rfa00920] D A3L23_03778 sbpA; Sulfate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D A3L23_03779 cysT; Sulfate transport system permease protein CysT K02046 cysU; sulfate/thiosulfate transport system permease protein D A3L23_03780 cysW_2; Sulfate transport system permease protein CysW K02047 cysW; sulfate/thiosulfate transport system permease protein D A3L23_03781 cysA_2; Sulfate/thiosulfate import ATP-binding protein CysA K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D A3L23_02603 tauD; Alpha-ketoglutarate-dependent taurine dioxygenase K03119 tauD; taurine dioxygenase [EC:1.14.11.17] D A3L23_03376 ssuA; Putative aliphatic sulfonates-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D A3L23_03374 ssuC_4; Putative aliphatic sulfonates transport permease protein SsuC K15554 ssuC; sulfonate transport system permease protein D A3L23_03375 ssuB_1; Aliphatic sulfonates import ATP-binding protein SsuB K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D A3L23_03377 ssuD_2; Alkanesulfonate monooxygenase K04091 ssuD; alkanesulfonate monooxygenase [EC:1.14.14.5 1.14.14.34] D A3L23_03783 cysNC; Bifunctional enzyme CysN/CysC K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D A3L23_03784 cysD; Sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D A3L23_04612 nrnA; Bifunctional oligoribonuclease and PAP phosphatase NrnA K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] D A3L23_03785 cysH_1; putative phosphoadenosine phosphosulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10] D A3L23_05017 cysH_2; Phosphoadenosine phosphosulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10] D A3L23_03546 cysJ; Sulfite reductase [NADPH] flavoprotein alpha-component K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2] D A3L23_03663 narB; Nitrate reductase K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2] D A3L23_03786 sir; Sulfite reductase K00392 sir; sulfite reductase (ferredoxin) [EC:1.8.7.1] D A3L23_00368 hypothetical protein K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4] D A3L23_00073 sseA; Putative thiosulfate sulfurtransferase SseA K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D A3L23_00771 Putative thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D A3L23_02460 sseB; Putative thiosulfate sulfurtransferase SseB K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D A3L23_00152 metX; Homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D A3L23_00310 metB; Cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D A3L23_02606 metZ; O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-] D A3L23_00606 msuD_1; Methanesulfonate monooxygenase K17228 sfnG; dimethylsulfone monooxygenase [EC:1.14.14.35] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:rfa00061] D A3L23_00018 Biotinylated protein TB7.3 K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D A3L23_00076 accC_1; Biotin carboxylase K11263 bccA; acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14] D A3L23_00378 accC_2; Biotin carboxylase K11263 bccA; acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14] D A3L23_03832 accD6; putative propionyl-CoA carboxylase beta chain 6 K18472 accD6; acetyl-CoA/propionyl-CoA carboxylase carboxyl transferase subunit [EC:6.4.1.2 6.4.1.3 2.1.3.15] D A3L23_03834 acpM; Meromycolate extension acyl carrier protein K02078 acpP; acyl carrier protein D A3L23_03835 fabD; Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D A3L23_03591 fabF_2; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K11533 fas; fatty acid synthase, bacteria type [EC:2.3.1.-] D A3L23_00416 fabF_1; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D A3L23_00443 fabG_4; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D A3L23_01385 fabG_8; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D A3L23_01487 novJ; Short-chain reductase protein NovJ K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D A3L23_01608 ped; (S)-1-Phenylethanol dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D A3L23_04593 budC_3; Diacetyl reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D A3L23_00640 desA1_1; Putative acyl-[acyl-carrier-protein] desaturase desA1 K03921 FAB2; acyl-[acyl-carrier protein] desaturase [EC:1.14.19.2 1.14.19.11 1.14.19.26] D A3L23_00758 desA1_2; Putative acyl-[acyl-carrier-protein] desaturase desA1 K03921 FAB2; acyl-[acyl-carrier protein] desaturase [EC:1.14.19.2 1.14.19.11 1.14.19.26] D A3L23_01498 desA1_3; Putative acyl-[acyl-carrier-protein] desaturase desA1 K03921 FAB2; acyl-[acyl-carrier protein] desaturase [EC:1.14.19.2 1.14.19.11 1.14.19.26] D A3L23_01832 desA1_4; Putative acyl-[acyl-carrier-protein] desaturase desA1 K03921 FAB2; acyl-[acyl-carrier protein] desaturase [EC:1.14.19.2 1.14.19.11 1.14.19.26] D A3L23_03015 desA1_5; Putative acyl-[acyl-carrier-protein] desaturase desA1 K03921 FAB2; acyl-[acyl-carrier protein] desaturase [EC:1.14.19.2 1.14.19.11 1.14.19.26] D A3L23_00410 lcfB_1; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D A3L23_02124 lcfB_3; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D A3L23_03167 Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D A3L23_03918 Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:rfa00071] D A3L23_00314 fadA_1; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A3L23_01384 fadI; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A3L23_02150 hypothetical protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A3L23_02333 fadA_2; Putative acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A3L23_02960 putative acetyl-CoA acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A3L23_03568 putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A3L23_03716 pcaF; Beta-ketoadipyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A3L23_04449 paaJ_2; 3-oxoadipyl-CoA/3-oxo-5,6-dehydrosuberyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D A3L23_02185 fadB_3; Fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D A3L23_02334 fadJ; Fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D A3L23_03257 echA8_2; putative enoyl-CoA hydratase echA8 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D A3L23_04767 putative enoyl-CoA hydratase echA17 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D A3L23_01591 fadB_2; putative enoyl-CoA hydratase K13767 fadB; enoyl-CoA hydratase [EC:4.2.1.17] D A3L23_02825 acrC_1; Acryloyl-CoA reductase (NADH) K00232 ACOX1_3; acyl-CoA oxidase [EC:1.3.3.6] D A3L23_00412 bbsG_1; (R)-benzylsuccinyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D A3L23_01103 Cyclohex-1-ene-1-carbonyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D A3L23_02462 bbsG_3; (R)-benzylsuccinyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D A3L23_02980 mmgC_4; Acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D A3L23_04622 Acyl-CoA dehydrogenase, short-chain specific K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D A3L23_04820 bcd_2; Acyl-CoA dehydrogenase, short-chain specific K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D A3L23_02186 mmgC_3; Acyl-CoA dehydrogenase K00255 ACADL; long-chain-acyl-CoA dehydrogenase [EC:1.3.8.8] D A3L23_04511 acdA_8; Acyl-CoA dehydrogenase K00255 ACADL; long-chain-acyl-CoA dehydrogenase [EC:1.3.8.8] D A3L23_00134 acdA_1; Acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D A3L23_00311 acdA_2; Acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D A3L23_00410 lcfB_1; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D A3L23_02124 lcfB_3; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D A3L23_03167 Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D A3L23_03918 Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D A3L23_00039 alkB_1; Alkane 1-monooxygenase K00496 alkB1_2; alkane 1-monooxygenase [EC:1.14.15.3] D A3L23_01166 alkB_2; Alkane 1-monooxygenase K00496 alkB1_2; alkane 1-monooxygenase [EC:1.14.15.3] D A3L23_01600 alkB_3; Alkane 1-monooxygenase K00496 alkB1_2; alkane 1-monooxygenase [EC:1.14.15.3] D A3L23_01169 thcD_1; Rhodocoxin reductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] D A3L23_01317 bedA; Benzene 1,2-dioxygenase system ferredoxin--NAD(+) reductase subunit K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] D A3L23_03552 thcD_2; Rhodocoxin reductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] D A3L23_05141 camA; Putidaredoxin reductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] D A3L23_01149 adhT_1; Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D A3L23_01007 ald_1; 3-succinoylsemialdehyde-pyridine dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00073 Cutin, suberine and wax biosynthesis [PATH:rfa00073] D A3L23_00170 acr1_2; Fatty acyl-CoA reductase K28138 acrB; alcohol-forming fatty acyl-CoA reductase [EC:1.2.1.84] D A3L23_00029 tgs3; putative diacylglycerol O-acyltransferase tgs3 K00635 tgs; wax synthase / diacylglycerol O-acyltransferase [EC:2.3.1.75 2.3.1.20] D A3L23_00541 tgs2; putative diacylglycerol O-acyltransferase tgs2 K00635 tgs; wax synthase / diacylglycerol O-acyltransferase [EC:2.3.1.75 2.3.1.20] C 00074 Mycolic acid biosynthesis [PATH:rfa00074] D A3L23_00076 accC_1; Biotin carboxylase K11263 bccA; acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14] D A3L23_00378 accC_2; Biotin carboxylase K11263 bccA; acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14] D A3L23_03832 accD6; putative propionyl-CoA carboxylase beta chain 6 K18472 accD6; acetyl-CoA/propionyl-CoA carboxylase carboxyl transferase subunit [EC:6.4.1.2 6.4.1.3 2.1.3.15] D A3L23_03592 acpS; Holo-[acyl-carrier-protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D A3L23_04605 npt; 4'-phosphopantetheinyl transferase Npt K02362 entD; enterobactin synthetase component D / holo-[acyl-carrier protein] synthase [EC:6.3.2.14 2.7.8.7] D A3L23_03834 acpM; Meromycolate extension acyl carrier protein K02078 acpP; acyl carrier protein D A3L23_03835 fabD; Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D A3L23_03591 fabF_2; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K11533 fas; fatty acid synthase, bacteria type [EC:2.3.1.-] D A3L23_01861 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase 3 K11608 mtfabH; mycobacterial beta-ketoacyl-[acyl-carrier protein] synthase III [EC:2.3.1.301] D A3L23_03833 kasA; 3-oxoacyl-[acyl-carrier-protein] synthase 1 K11609 kasA; meromycolic acid 3-oxoacyl-[acyl-carrier protein] synthase I [EC:2.3.1.293] D A3L23_04316 fabG1; 3-oxoacyl-[acyl-carrier-protein] reductase FabG1 K11610 mabA; meromycolic acid 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.-] D A3L23_02895 hypothetical protein K27071 hadA; meromycolic acid (3R)-3-hydroxyacyl-[acyl-carrier protein] dehydratase HadA [EC:4.2.1.-] D A3L23_02896 hypothetical protein K27072 hadB; meromycolic acid (3R)-3-hydroxyacyl-[acyl-carrier protein] dehydratase HadB [EC:4.2.1.-] D A3L23_01345 hypothetical protein K27689 hadAB; meromycolic acid (3R)-3-hydroxyacyl-[acyl-carrier protein] dehydratase HadAB [EC:4.2.1.-] D A3L23_04315 inhA_2; Enoyl-[acyl-carrier-protein] reductase [NADH] K11611 inhA; meromycolic acid enoyl-[acyl-carrier protein] reductase [EC:1.3.1.118] D A3L23_00640 desA1_1; Putative acyl-[acyl-carrier-protein] desaturase desA1 K03921 FAB2; acyl-[acyl-carrier protein] desaturase [EC:1.14.19.2 1.14.19.11 1.14.19.26] D A3L23_00758 desA1_2; Putative acyl-[acyl-carrier-protein] desaturase desA1 K03921 FAB2; acyl-[acyl-carrier protein] desaturase [EC:1.14.19.2 1.14.19.11 1.14.19.26] D A3L23_01498 desA1_3; Putative acyl-[acyl-carrier-protein] desaturase desA1 K03921 FAB2; acyl-[acyl-carrier protein] desaturase [EC:1.14.19.2 1.14.19.11 1.14.19.26] D A3L23_01832 desA1_4; Putative acyl-[acyl-carrier-protein] desaturase desA1 K03921 FAB2; acyl-[acyl-carrier protein] desaturase [EC:1.14.19.2 1.14.19.11 1.14.19.26] D A3L23_03015 desA1_5; Putative acyl-[acyl-carrier-protein] desaturase desA1 K03921 FAB2; acyl-[acyl-carrier protein] desaturase [EC:1.14.19.2 1.14.19.11 1.14.19.26] D A3L23_02033 accD5_3; putative propionyl-CoA carboxylase beta chain 5 K27093 accD4; long-chain acyl-CoA carboxylase carboxyl transferase subunit [EC:6.4.1.- 2.1.3.-] D A3L23_00063 accD5_1; putative propionyl-CoA carboxylase beta chain 5 K27094 accD5; propionyl-CoA/long-chain acyl-CoA carboxylase carboxyl transferase subunit [EC:6.4.1.3 6.4.1.- 2.1.3.15] D A3L23_00380 accD5_2; putative propionyl-CoA carboxylase beta chain 5 K27094 accD5; propionyl-CoA/long-chain acyl-CoA carboxylase carboxyl transferase subunit [EC:6.4.1.3 6.4.1.- 2.1.3.15] D A3L23_02031 Long-chain-fatty-acid--AMP ligase FadD32 K12428 fadD32; fatty acyl-AMP ligase FadD32 [EC:6.2.1.-] D A3L23_02032 ppsA; Phthiocerol synthesis polyketide synthase type I PpsA K12437 pks13; polyketide synthase 13 D A3L23_03669 isfD_2; Sulfoacetaldehyde reductase K27306 cmrA; mycolic acid reductase D A3L23_02025 fbpB_1; Diacylglycerol acyltransferase/mycolyltransferase Ag85B K18851 fbp; diacylglycerol O-acyltransferase / trehalose O-mycolyltransferase / mycolyltransferase Ag85 [EC:2.3.1.20 2.3.1.122 2.3.1.-] D A3L23_02026 fbpB_2; Diacylglycerol acyltransferase/mycolyltransferase Ag85B K18851 fbp; diacylglycerol O-acyltransferase / trehalose O-mycolyltransferase / mycolyltransferase Ag85 [EC:2.3.1.20 2.3.1.122 2.3.1.-] C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:rfa00561] D A3L23_00272 garK_1; Glycerate 2-kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D A3L23_03466 garK_2; Glycerate 2-kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D A3L23_03897 garK_3; Glycerate 2-kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D A3L23_01007 ald_1; 3-succinoylsemialdehyde-pyridine dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D A3L23_02749 adhC2; NADP-dependent alcohol dehydrogenase C 2 K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D A3L23_02208 glpK; Glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D A3L23_04089 yutF; putative hydrolase YutF K06117 E3.1.3.21; glycerol-1-phosphatase [EC:3.1.3.21] D A3L23_01537 plsB1; Putative acyltransferase plsB1 K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D A3L23_03924 plsC_3; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D A3L23_04594 plsC_4; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D A3L23_04536 dagK; Diacylglycerol kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107] D A3L23_00029 tgs3; putative diacylglycerol O-acyltransferase tgs3 K00635 tgs; wax synthase / diacylglycerol O-acyltransferase [EC:2.3.1.75 2.3.1.20] D A3L23_00541 tgs2; putative diacylglycerol O-acyltransferase tgs2 K00635 tgs; wax synthase / diacylglycerol O-acyltransferase [EC:2.3.1.75 2.3.1.20] D A3L23_02025 fbpB_1; Diacylglycerol acyltransferase/mycolyltransferase Ag85B K18851 fbp; diacylglycerol O-acyltransferase / trehalose O-mycolyltransferase / mycolyltransferase Ag85 [EC:2.3.1.20 2.3.1.122 2.3.1.-] D A3L23_02026 fbpB_2; Diacylglycerol acyltransferase/mycolyltransferase Ag85B K18851 fbp; diacylglycerol O-acyltransferase / trehalose O-mycolyltransferase / mycolyltransferase Ag85 [EC:2.3.1.20 2.3.1.122 2.3.1.-] D A3L23_01599 ytpA_1; Phospholipase YtpA K01054 MGLL; acylglycerol lipase [EC:3.1.1.23] C 00564 Glycerophospholipid metabolism [PATH:rfa00564] D A3L23_04715 gpsA; Glycerol-3-phosphate dehydrogenase [NAD(P)+] K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D A3L23_00104 glpD2_1; Glycerol-3-phosphate dehydrogenase 2 K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] D A3L23_02209 glpD2_2; Glycerol-3-phosphate dehydrogenase 2 K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] D A3L23_01537 plsB1; Putative acyltransferase plsB1 K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D A3L23_03924 plsC_3; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D A3L23_04594 plsC_4; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D A3L23_04536 dagK; Diacylglycerol kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107] D A3L23_01984 glpQ1; putative glycerophosphoryl diester phosphodiesterase 1 K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D A3L23_00282 eutB; Ethanolamine ammonia-lyase heavy chain K03735 eutB; ethanolamine ammonia-lyase large subunit [EC:4.3.1.7] D A3L23_00281 eutC; Ethanolamine ammonia-lyase light chain K03736 eutC; ethanolamine ammonia-lyase small subunit [EC:4.3.1.7] D A3L23_04659 cdsA; Phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D A3L23_02680 hypothetical protein K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D A3L23_02681 psd_1; Phosphatidylserine decarboxylase proenzyme K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D A3L23_02906 psd_2; Phosphatidylserine decarboxylase proenzyme K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D A3L23_04541 pgsA2; Putative CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyl-transferase 2 K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D A3L23_04168 pgsA1; Putative CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyl-transferase 1 K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41] C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism D A3L23_00098 bioF_1; 8-amino-7-oxononanoate synthase K00654 SPT; serine palmitoyltransferase [EC:2.3.1.50] C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism [PATH:rfa00592] D A3L23_02825 acrC_1; Acryloyl-CoA reductase (NADH) K00232 ACOX1_3; acyl-CoA oxidase [EC:1.3.3.6] D A3L23_04449 paaJ_2; 3-oxoadipyl-CoA/3-oxo-5,6-dehydrosuberyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 01040 Biosynthesis of unsaturated fatty acids [PATH:rfa01040] D A3L23_00640 desA1_1; Putative acyl-[acyl-carrier-protein] desaturase desA1 K03921 FAB2; acyl-[acyl-carrier protein] desaturase [EC:1.14.19.2 1.14.19.11 1.14.19.26] D A3L23_00758 desA1_2; Putative acyl-[acyl-carrier-protein] desaturase desA1 K03921 FAB2; acyl-[acyl-carrier protein] desaturase [EC:1.14.19.2 1.14.19.11 1.14.19.26] D A3L23_01498 desA1_3; Putative acyl-[acyl-carrier-protein] desaturase desA1 K03921 FAB2; acyl-[acyl-carrier protein] desaturase [EC:1.14.19.2 1.14.19.11 1.14.19.26] D A3L23_01832 desA1_4; Putative acyl-[acyl-carrier-protein] desaturase desA1 K03921 FAB2; acyl-[acyl-carrier protein] desaturase [EC:1.14.19.2 1.14.19.11 1.14.19.26] D A3L23_03015 desA1_5; Putative acyl-[acyl-carrier-protein] desaturase desA1 K03921 FAB2; acyl-[acyl-carrier protein] desaturase [EC:1.14.19.2 1.14.19.11 1.14.19.26] D A3L23_00025 desA3_1; Stearoyl-CoA 9-desaturase K22769 desA3; NADPH-dependent stearoyl-CoA 9-desaturase [EC:1.14.19.-] D A3L23_00026 desA3_2; Stearoyl-CoA 9-desaturase K22769 desA3; NADPH-dependent stearoyl-CoA 9-desaturase [EC:1.14.19.-] D A3L23_00889 desA3_3; Stearoyl-CoA 9-desaturase K22769 desA3; NADPH-dependent stearoyl-CoA 9-desaturase [EC:1.14.19.-] D A3L23_03676 desA3_4; Stearoyl-CoA 9-desaturase K22769 desA3; NADPH-dependent stearoyl-CoA 9-desaturase [EC:1.14.19.-] D A3L23_00027 Stearoyl-CoA 9-desaturase electron transfer partner K22770 K22770; stearoyl-CoA 9-desaturase NADPH oxidoreductase D A3L23_00890 Stearoyl-CoA 9-desaturase electron transfer partner K22770 K22770; stearoyl-CoA 9-desaturase NADPH oxidoreductase D A3L23_03675 Stearoyl-CoA 9-desaturase electron transfer partner K22770 K22770; stearoyl-CoA 9-desaturase NADPH oxidoreductase D A3L23_02825 acrC_1; Acryloyl-CoA reductase (NADH) K00232 ACOX1_3; acyl-CoA oxidase [EC:1.3.3.6] D A3L23_04030 tesB_1; Acyl-CoA thioesterase 2 K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.20] D A3L23_04417 tesB_2; Acyl-CoA thioesterase 2 K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.20] B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:rfa00230] D A3L23_04800 pgm; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D A3L23_00512 prs; Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D A3L23_00788 purF; Amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D A3L23_00839 purD; Phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D A3L23_00603 purN_1; Phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D A3L23_02597 purT; Phosphoribosylglycinamide formyltransferase 2 K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21] D A3L23_00792 purL; Phosphoribosylformylglycinamidine synthase subunit PurL K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3] D A3L23_00800 purS; Phosphoribosylformylglycinamidine synthase subunit PurS K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3] D A3L23_00799 purQ; Phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D A3L23_00783 purM; Phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D A3L23_00057 purK; N5-carboxyaminoimidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18] D A3L23_00056 purE; N5-carboxyaminoimidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D A3L23_00810 purC; Phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D A3L23_00832 purB; Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D A3L23_00602 purH; Bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D A3L23_04407 apt; Adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D A3L23_02448 surE; 5'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D A3L23_02608 nagD_2; Ribonucleotide monophosphatase NagD K02566 nagD; 5'-nucleotidase [EC:3.1.3.5] D A3L23_00112 punA; Purine nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1] D A3L23_03955 Laccase domain protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D A3L23_04302 rihA; Pyrimidine-specific ribonucleoside hydrolase RihA K01239 E3.2.2.1; purine nucleosidase [EC:3.2.2.1] D A3L23_02505 hpt; Hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D A3L23_00185 putative oxidoreductase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D A3L23_00186 guaB; Inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D A3L23_03732 ndkA; Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D A3L23_03583 Non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D A3L23_03171 xdhA_2; Xanthine dehydrogenase molybdenum-binding subunit K11177 yagR; xanthine dehydrogenase YagR molybdenum-binding subunit [EC:1.17.1.4] D A3L23_03170 hcrB; 4-hydroxybenzoyl-CoA reductase subunit beta K11178 yagS; xanthine dehydrogenase YagS FAD-binding subunit [EC:1.17.1.4] D A3L23_03169 yagT; Putative xanthine dehydrogenase YagT iron-sulfur-binding subunit K13483 yagT; xanthine dehydrogenase YagT iron-sulfur-binding subunit D A3L23_00183 guaA_1; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D A3L23_01611 guaA_2; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D A3L23_04184 guaB1; putative oxidoreductase K26110 guaB1; GMP reductase [EC:1.7.1.7] D A3L23_02986 guaD_2; Guanine deaminase K01487 guaD; guanine deaminase [EC:3.5.4.3] D A3L23_04370 gmk; Guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D A3L23_04781 nrdE2; Ribonucleoside-diphosphate reductase subunit alpha 2 K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D A3L23_04779 nrdF2; Ribonucleoside-diphosphate reductase subunit beta nrdF2 K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D A3L23_03811 dgt; Deoxyguanosinetriphosphate triphosphohydrolase-like protein K01129 dgt; dGTPase [EC:3.1.5.1] D A3L23_04406 relA_2; Bifunctional (p)ppGpp synthase/hydrolase RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D A3L23_00495 gppA_1; Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D A3L23_02797 gppA_2; Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D A3L23_01614 ywaC_1; GTP pyrophosphokinase YwaC K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5] D A3L23_03548 ywaC_2; GTP pyrophosphokinase YwaC K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5] D A3L23_00893 cyaA; Adenylate cyclase 1 K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1] D A3L23_01418 cyaB_1; Adenylate cyclase 2 K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1] D A3L23_01539 pH-sensitive adenylate cyclase K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1] D A3L23_02659 pH-sensitive adenylate cyclase K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1] D A3L23_02587 purA; Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D A3L23_03899 adoK; Adenosine kinase K00856 ADK; adenosine kinase [EC:2.7.1.20] D A3L23_00121 add; Adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4] D A3L23_03160 Adenine deaminase K21053 ade; adenine deaminase [EC:3.5.4.2] D A3L23_00231 adk; Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D A3L23_00506 mazG; Nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D A3L23_03179 cpdA_1; 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53] D A3L23_04424 AP-4-A phosphorylase K19710 E2.7.7.53; ATP adenylyltransferase [EC:2.7.7.53] D A3L23_03783 cysNC; Bifunctional enzyme CysN/CysC K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D A3L23_03784 cysD; Sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D A3L23_00088 uox; Uricase K00365 uaZ; urate oxidase [EC:1.7.3.3] D A3L23_00087 hiuH; 5-hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17] D A3L23_00086 uao; Uric acid degradation bifunctional protein K16840 hpxQ; 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase [EC:4.1.1.97] D A3L23_02496 hypothetical protein K16840 hpxQ; 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase [EC:4.1.1.97] D A3L23_00294 hypothetical protein K16841 hpxA; allantoin racemase [EC:5.1.99.3] D A3L23_04653 pgdA; Peptidoglycan deacetylase K16842 hpxB; allantoinase [EC:3.5.2.5] D A3L23_02492 alc; allantoicase K01477 alc; allantoicase [EC:3.5.3.4] D A3L23_04201 ureC; Urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5] D A3L23_04200 ureA; Urease subunit alpha K14048 ureAB; urease subunit gamma/beta [EC:3.5.1.5] D A3L23_00931 ywrD; Putative gamma-glutamyltransferase YwrD K22602 hpxW; oxamate amidohydrolase [EC:3.5.1.126] C 00240 Pyrimidine metabolism [PATH:rfa00240] D A3L23_04373 carB_1; Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D A3L23_04374 carA_1; Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D A3L23_04377 pyrB; Aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D A3L23_04376 pyrC; Dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D A3L23_04292 pyrD; Dihydroorotate dehydrogenase (quinone) K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2] D A3L23_02565 pyrE; Orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D A3L23_04372 pyrF; Orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D A3L23_04661 pyrH; Uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D A3L23_03732 ndkA; Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D A3L23_00506 mazG; Nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D A3L23_00065 Maf-like protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D A3L23_04096 pyrG; CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2] D A3L23_04103 cmk; Cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D A3L23_02448 surE; 5'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D A3L23_02608 nagD_2; Ribonucleotide monophosphatase NagD K02566 nagD; 5'-nucleotidase [EC:3.1.3.5] D A3L23_00115 upp_1; Uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D A3L23_03494 upp_2; Uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D A3L23_04378 pyrR; Bifunctional protein PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D A3L23_00129 cdd; Cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5] D A3L23_03474 tadA_2; tRNA-specific adenosine deaminase K03365 FCY1; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21] D A3L23_01351 dcd; Deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D A3L23_04781 nrdE2; Ribonucleoside-diphosphate reductase subunit alpha 2 K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D A3L23_04779 nrdF2; Ribonucleoside-diphosphate reductase subunit beta nrdF2 K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D A3L23_00037 tmk; Thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D A3L23_04473 dut; Deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D A3L23_00128 deoA; Thymidine phosphorylase K00758 deoA; thymidine phosphorylase [EC:2.4.2.4] D A3L23_00636 thyA; Thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D A3L23_04549 thyX; Thymidylate synthase ThyX K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] D A3L23_03228 D-hydantoinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D A3L23_04125 D-hydantoinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D A3L23_03227 N-carbamoyl-D-amino acid hydrolase K01431 UPB1; beta-ureidopropionase [EC:3.5.1.6] D A3L23_03491 bar; Barbiturase K19794 bar; barbiturase [EC:3.5.2.1] D A3L23_03490 aam_3; Acylamidase K19795 E3.5.1.95; ureidomalonase [EC:3.5.1.95] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:rfa00250] D A3L23_03997 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D A3L23_02709 ansA; L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D A3L23_03900 asnB; Putative asparagine synthetase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D A3L23_01095 aspC_2; putative aspartate aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D A3L23_01702 aspC_3; putative aspartate aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D A3L23_01098 ald_2; Alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D A3L23_02707 aspA; Aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1] D A3L23_02705 argG_1; Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D A3L23_04077 argG_2; Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D A3L23_04932 argG_3; Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D A3L23_04078 argH_1; Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D A3L23_04931 argH_2; Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D A3L23_02587 purA; Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D A3L23_00832 purB; Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D A3L23_04377 pyrB; Aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D A3L23_01795 gadA; Glutamate decarboxylase alpha K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D A3L23_03747 davT; 5-aminovalerate aminotransferase DavT K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D A3L23_00331 gabT_1; 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D A3L23_00330 sad_1; Succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D A3L23_00617 sad_2; Succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D A3L23_01955 gabD2; Putative succinate-semialdehyde dehydrogenase [NADP(+)] 2 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D A3L23_03349 gabD1; Succinate-semialdehyde dehydrogenase [NADP(+)] 1 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D A3L23_03749 sad_4; Succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D A3L23_01850 gltB_1; Glutamate synthase [NADPH] large chain K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D A3L23_04027 gltB_2; Glutamate synthase [NADPH] large chain K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D A3L23_01851 gltD_1; Glutamate synthase [NADPH] small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D A3L23_04028 gltD_2; Glutamate synthase [NADPH] small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D A3L23_03689 gdh; NAD-specific glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D A3L23_03476 gdhA; NAD(P)-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D A3L23_00861 rocA1; 1-pyrroline-5-carboxylate dehydrogenase 1 K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88] D A3L23_00239 gms; Glutamate--methylamine ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D A3L23_00882 glnA_1; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D A3L23_03876 glnA_2; putative glutamine synthetase 2 K01915 glnA; glutamine synthetase [EC:6.3.1.2] D A3L23_03882 glnA_3; Glutamine synthetase 1 K01915 glnA; glutamine synthetase [EC:6.3.1.2] D A3L23_04373 carB_1; Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D A3L23_04374 carA_1; Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D A3L23_00369 glsA1_1; Glutaminase 1 K01425 glsA; glutaminase [EC:3.5.1.2] D A3L23_04457 glsA1_2; Glutaminase 1 K01425 glsA; glutaminase [EC:3.5.1.2] D A3L23_00799 purQ; Phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D A3L23_00202 glmS; Glutamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D A3L23_00788 purF; Amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:rfa00260] D A3L23_02362 ask; Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D A3L23_02363 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D A3L23_03268 hom; Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D A3L23_03270 thrB; Homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39] D A3L23_03269 thrC; Threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D A3L23_00836 ltaE; Low specificity L-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48] D A3L23_02144 glyA2; Serine hydroxymethyltransferase 2 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D A3L23_03011 glyA1; Serine hydroxymethyltransferase 1 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D A3L23_00272 garK_1; Glycerate 2-kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D A3L23_03466 garK_2; Glycerate 2-kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D A3L23_03897 garK_3; Glycerate 2-kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D A3L23_02793 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D A3L23_01019 pspA_3; Phosphoserine phosphatase 1 K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D A3L23_01027 pspA_4; Phosphoserine phosphatase 1 K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D A3L23_04732 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D A3L23_00703 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D A3L23_04773 serB_2; Phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D A3L23_02178 puo_2; Putrescine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4] D A3L23_02739 maoII; Copper methylamine oxidase K00276 AOC3; primary-amine oxidase [EC:1.4.3.21] D A3L23_04177 gcvP; putative glycine dehydrogenase (decarboxylating) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D A3L23_03891 gcvT_2; Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D A3L23_01025 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D A3L23_02243 pdhD; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D A3L23_02724 lpdC; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D A3L23_02138 gcvH_1; Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D A3L23_04172 gcvH_2; Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D A3L23_02680 hypothetical protein K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D A3L23_04564 codA; Choline oxidase K17755 codA; choline oxidase [EC:1.1.3.17] D A3L23_00125 prr_1; Gamma-aminobutyraldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8] D A3L23_04566 gbsA; Betaine aldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8] D A3L23_02135 dmg_1; Dimethylglycine oxidase K00309 dmg; dimethylglycine oxidase [EC:1.5.3.10] D A3L23_02141 soxA; Sarcosine oxidase subunit alpha K00302 soxA; sarcosine oxidase, subunit alpha [EC:1.5.3.24 1.5.3.1] D A3L23_02143 soxB; Sarcosine oxidase subunit beta K00303 soxB; sarcosine oxidase, subunit beta [EC:1.5.3.24 1.5.3.1] D A3L23_02140 soxG; Sarcosine oxidase subunit gamma K00305 soxG; sarcosine oxidase, subunit gamma [EC:1.5.3.24 1.5.3.1] D A3L23_02142 soxD; Sarcosine oxidase subunit delta K00304 soxD; sarcosine oxidase, subunit delta [EC:1.5.3.24 1.5.3.1] D A3L23_00312 cbs; Putative cystathionine beta-synthase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22] D A3L23_02137 sdaA; L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D A3L23_02998 tdcB; L-threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D A3L23_03973 ilvA; L-threonine dehydratase biosynthetic IlvA K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D A3L23_04023 trpA; Tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D A3L23_04022 trpB; Tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D A3L23_03740 ectB; Diaminobutyrate--2-oxoglutarate transaminase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76] D A3L23_03739 ectC; L-ectoine synthase K06720 ectC; L-ectoine synthase [EC:4.2.1.108] D A3L23_03751 doeA; Ectoine hydrolase K15783 doeA; ectoine hydrolase [EC:3.5.4.44] C 00270 Cysteine and methionine metabolism [PATH:rfa00270] D A3L23_00312 cbs; Putative cystathionine beta-synthase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22] D A3L23_04271 metH; Methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D A3L23_00741 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D A3L23_04367 metK; S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D A3L23_01364 mtnP; S-methyl-5'-thioadenosine phosphorylase K00772 mtaP; 5'-methylthioadenosine phosphorylase [EC:2.4.2.28] D A3L23_03955 Laccase domain protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D A3L23_02263 msrC; Free methionine-R-sulfoxide reductase K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14] D A3L23_01965 hhaIM; Modification methylase HhaI K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D A3L23_02267 ydiP; putative BsuMI modification methylase subunit YdiP K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D A3L23_05035 hypothetical protein K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D A3L23_00038 ahcY; Adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D A3L23_00969 acdS; 1-aminocyclopropane-1-carboxylate deaminase K01505 E3.5.99.7; 1-aminocyclopropane-1-carboxylate deaminase [EC:3.5.99.7] D A3L23_02362 ask; Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D A3L23_02363 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D A3L23_03268 hom; Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D A3L23_03270 thrB; Homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39] D A3L23_00152 metX; Homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D A3L23_00310 metB; Cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D A3L23_00151 mdeA_1; Methionine gamma-lyase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] D A3L23_03086 mdeA_2; Methionine gamma-lyase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] D A3L23_02606 metZ; O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-] D A3L23_01945 ilvE_1; Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D A3L23_03892 ilvE_2; Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D A3L23_00522 egtA; Glutamate--cysteine ligase GshA K01919 gshA; glutamate---cysteine ligase [EC:6.3.2.2] D A3L23_00073 sseA; Putative thiosulfate sulfurtransferase SseA K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D A3L23_00771 Putative thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D A3L23_02460 sseB; Putative thiosulfate sulfurtransferase SseB K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D A3L23_02844 sbnA; putative siderophore biosynthesis protein SbnA K28981 cds1; L-cysteine desulfidase [EC:4.4.1.28] D A3L23_02137 sdaA; L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D A3L23_04732 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D A3L23_00703 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00280 Valine, leucine and isoleucine degradation [PATH:rfa00280] D A3L23_01945 ilvE_1; Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D A3L23_03892 ilvE_2; Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D A3L23_00329 vdh; Valine dehydrogenase K00271 vdh; valine dehydrogenase (NAD+) [EC:1.4.1.23] D A3L23_00327 bkdA_1; 3-methyl-2-oxobutanoate dehydrogenase subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D A3L23_02246 bkdA_2; 3-methyl-2-oxobutanoate dehydrogenase subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D A3L23_00326 bkdB_1; 3-methyl-2-oxobutanoate dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D A3L23_02245 bkdB_2; 3-methyl-2-oxobutanoate dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D A3L23_00325 pdhC_1; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D A3L23_02244 bkdC; Dihydrolipoyllysine-residue acyltransferase component of branched-chain alpha-ketoacid dehydrogenase complex K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D A3L23_01025 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D A3L23_02243 pdhD; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D A3L23_02724 lpdC; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D A3L23_00412 bbsG_1; (R)-benzylsuccinyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D A3L23_01103 Cyclohex-1-ene-1-carbonyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D A3L23_02462 bbsG_3; (R)-benzylsuccinyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D A3L23_02980 mmgC_4; Acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D A3L23_04622 Acyl-CoA dehydrogenase, short-chain specific K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D A3L23_04820 bcd_2; Acyl-CoA dehydrogenase, short-chain specific K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D A3L23_02158 acdA_6; Acyl-CoA dehydrogenase K11410 acdH; short-chain 2-methylacyl-CoA dehydrogenase [EC:1.3.8.5] D A3L23_03257 echA8_2; putative enoyl-CoA hydratase echA8 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D A3L23_04767 putative enoyl-CoA hydratase echA17 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D A3L23_02185 fadB_3; Fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D A3L23_02334 fadJ; Fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D A3L23_04449 paaJ_2; 3-oxoadipyl-CoA/3-oxo-5,6-dehydrosuberyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D A3L23_00076 accC_1; Biotin carboxylase K11263 bccA; acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14] D A3L23_00378 accC_2; Biotin carboxylase K11263 bccA; acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14] D A3L23_00063 accD5_1; putative propionyl-CoA carboxylase beta chain 5 K27094 accD5; propionyl-CoA/long-chain acyl-CoA carboxylase carboxyl transferase subunit [EC:6.4.1.3 6.4.1.- 2.1.3.15] D A3L23_00380 accD5_2; putative propionyl-CoA carboxylase beta chain 5 K27094 accD5; propionyl-CoA/long-chain acyl-CoA carboxylase carboxyl transferase subunit [EC:6.4.1.3 6.4.1.- 2.1.3.15] D A3L23_03832 accD6; putative propionyl-CoA carboxylase beta chain 6 K18472 accD6; acetyl-CoA/propionyl-CoA carboxylase carboxyl transferase subunit [EC:6.4.1.2 6.4.1.3 2.1.3.15] D A3L23_03567 hypothetical protein K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D A3L23_04987 hypothetical protein K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D A3L23_04304 mutB; putative methylmalonyl-CoA mutase large subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D A3L23_04306 mutA_2; putative methylmalonyl-CoA mutase small subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D A3L23_04985 scpA_3; Methylmalonyl-CoA mutase K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2] D A3L23_04980 scpA_2; Methylmalonyl-CoA mutase K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2] D A3L23_03256 mmsB; putative 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] D A3L23_03253 bauC_1; Putative 3-oxopropanoate dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D A3L23_03854 bauC_2; Putative 3-oxopropanoate dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D A3L23_01007 ald_1; 3-succinoylsemialdehyde-pyridine dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D A3L23_00331 gabT_1; 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D A3L23_02159 accA1_1; Acetyl-/propionyl-coenzyme A carboxylase alpha chain K01968 MCCC1; 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4] D A3L23_02160 Methylmalonyl-CoA carboxyltransferase 12S subunit K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4] D A3L23_00630 ccl; (R)-citramalyl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D A3L23_01259 yngG; Hydroxymethylglutaryl-CoA lyase YngG K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D A3L23_02453 scoA_1; putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5] D A3L23_03722 scoA_2; putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5] D A3L23_02452 scoB_1; putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] D A3L23_03723 scoB_2; putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] D A3L23_00279 acsA_1; Acetyl-coenzyme A synthetase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16] D A3L23_00314 fadA_1; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A3L23_01384 fadI; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A3L23_02150 hypothetical protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A3L23_02333 fadA_2; Putative acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A3L23_02960 putative acetyl-CoA acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A3L23_03568 putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A3L23_03716 pcaF; Beta-ketoadipyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:rfa00290] D A3L23_02998 tdcB; L-threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D A3L23_03973 ilvA; L-threonine dehydratase biosynthetic IlvA K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D A3L23_01619 hacA; Homoaconitase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D A3L23_04721 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D A3L23_01618 dmdB; 2,3-dimethylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D A3L23_04720 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D A3L23_04048 hicd; Homoisocitrate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D A3L23_04731 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D A3L23_04735 ilvB1; Acetolactate synthase large subunit IlvB1 K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D A3L23_04734 ilvH; Acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D A3L23_04733 ilvC; Ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D A3L23_01532 ilvD_1; Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D A3L23_04737 ilvD_2; Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D A3L23_01945 ilvE_1; Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D A3L23_03892 ilvE_2; Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D A3L23_01095 aspC_2; putative aspartate aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D A3L23_01702 aspC_3; putative aspartate aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D A3L23_01288 leuA_1; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D A3L23_02360 leuA_3; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:rfa00300] D A3L23_03268 hom; Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D A3L23_02362 ask; Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D A3L23_02363 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D A3L23_01185 dapA_1; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D A3L23_04209 dapA_2; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D A3L23_04548 dapA_3; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D A3L23_04559 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D A3L23_03094 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117] D A3L23_04074 argD; Acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D A3L23_00736 dapC; putative N-succinyldiaminopimelate aminotransferase DapC K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17] D A3L23_03097 dapE_2; Putative succinyl-diaminopimelate desuccinylase DapE K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D A3L23_04520 dapF; Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D A3L23_03267 lysA; Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D A3L23_00105 lysN_1; 2-aminoadipate transaminase K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-] D A3L23_03752 lysN_4; 2-aminoadipate transaminase K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-] D A3L23_00388 murE_1; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D A3L23_03946 murE_2; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D A3L23_03947 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:rfa00310] D A3L23_01898 gabD_1; Succinate-semialdehyde dehydrogenase [NADP(+)] K26061 amaB; L-aminoadipate-semialdehyde dehydrogenase D A3L23_01025 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D A3L23_02243 pdhD; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D A3L23_02724 lpdC; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D A3L23_00134 acdA_1; Acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D A3L23_00311 acdA_2; Acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D A3L23_03257 echA8_2; putative enoyl-CoA hydratase echA8 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D A3L23_04767 putative enoyl-CoA hydratase echA17 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D A3L23_02185 fadB_3; Fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D A3L23_02334 fadJ; Fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D A3L23_00314 fadA_1; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A3L23_01384 fadI; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A3L23_02150 hypothetical protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A3L23_02333 fadA_2; Putative acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A3L23_02960 putative acetyl-CoA acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A3L23_03568 putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A3L23_03716 pcaF; Beta-ketoadipyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A3L23_00334 iaaM; Tryptophan 2-monooxygenase K00468 davB; lysine 2-monooxygenase [EC:1.13.12.2] D A3L23_00335 ramA_1; (R)-stereoselective amidase K01506 davA; 5-aminopentanamidase [EC:3.5.1.30] D A3L23_00331 gabT_1; 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D A3L23_00330 sad_1; Succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D A3L23_00617 sad_2; Succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D A3L23_01955 gabD2; Putative succinate-semialdehyde dehydrogenase [NADP(+)] 2 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D A3L23_03349 gabD1; Succinate-semialdehyde dehydrogenase [NADP(+)] 1 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D A3L23_03749 sad_4; Succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D A3L23_01007 ald_1; 3-succinoylsemialdehyde-pyridine dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00220 Arginine biosynthesis [PATH:rfa00220] D A3L23_04075 argF; Ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D A3L23_02705 argG_1; Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D A3L23_04077 argG_2; Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D A3L23_04932 argG_3; Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D A3L23_04078 argH_1; Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D A3L23_04931 argH_2; Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D A3L23_01647 kipA_1; KipI antagonist K01941 uca; urea/guanidine carboxylase [EC:6.3.4.6 6.3.4.26] D A3L23_01648 atzF; Allophanate hydrolase K01457 atzF; allophanate hydrolase [EC:3.5.1.54] D A3L23_04201 ureC; Urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5] D A3L23_04200 ureA; Urease subunit alpha K14048 ureAB; urease subunit gamma/beta [EC:3.5.1.5] D A3L23_00550 arcA; Arginine deiminase K01478 arcA; arginine deiminase [EC:3.5.3.6] D A3L23_00369 glsA1_1; Glutaminase 1 K01425 glsA; glutaminase [EC:3.5.1.2] D A3L23_04457 glsA1_2; Glutaminase 1 K01425 glsA; glutaminase [EC:3.5.1.2] D A3L23_00799 purQ; Phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D A3L23_00239 gms; Glutamate--methylamine ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D A3L23_00882 glnA_1; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D A3L23_03876 glnA_2; putative glutamine synthetase 2 K01915 glnA; glutamine synthetase [EC:6.3.1.2] D A3L23_03882 glnA_3; Glutamine synthetase 1 K01915 glnA; glutamine synthetase [EC:6.3.1.2] D A3L23_04373 carB_1; Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D A3L23_04374 carA_1; Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D A3L23_03689 gdh; NAD-specific glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D A3L23_03476 gdhA; NAD(P)-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D A3L23_01095 aspC_2; putative aspartate aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D A3L23_01702 aspC_3; putative aspartate aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D A3L23_04542 argA; Amino-acid acetyltransferase K00619 argA; amino-acid N-acetyltransferase [EC:2.3.1.1] D A3L23_04072 argJ; Arginine biosynthesis bifunctional protein ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] D A3L23_04938 oat2; Glutamate N-acetyltransferase 2 K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] D A3L23_02664 hypothetical protein K22476 K22476; N-acetylglutamate synthase [EC:2.3.1.1] D A3L23_04073 argB; Acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D A3L23_04071 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D A3L23_04074 argD; Acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] C 00330 Arginine and proline metabolism [PATH:rfa00330] D A3L23_03474 tadA_2; tRNA-specific adenosine deaminase K03365 FCY1; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21] D A3L23_03452 apc3_1; Acetophenone carboxylase gamma subunit K01473 hyuA; N-methylhydantoinase A [EC:3.5.2.14] D A3L23_03480 apc3_2; Acetophenone carboxylase gamma subunit K01473 hyuA; N-methylhydantoinase A [EC:3.5.2.14] D A3L23_03451 apc4_1; Acetophenone carboxylase delta subunit K01474 hyuB; N-methylhydantoinase B [EC:3.5.2.14] D A3L23_03479 apc4_2; Acetophenone carboxylase delta subunit K01474 hyuB; N-methylhydantoinase B [EC:3.5.2.14] D A3L23_00935 aguA; Putative agmatine deiminase K10536 aguA; agmatine deiminase [EC:3.5.3.12] D A3L23_01541 ramA_2; (R)-stereoselective amidase K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53] D A3L23_04506 bauA; Beta-alanine--pyruvate aminotransferase K12256 spuC; putrescine---pyruvate transaminase [EC:2.6.1.113] D A3L23_00934 puo_1; Putrescine oxidase K03343 puo; putrescine oxidase [EC:1.4.3.10] D A3L23_01007 ald_1; 3-succinoylsemialdehyde-pyridine dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D A3L23_02178 puo_2; Putrescine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4] D A3L23_00337 gbh; Guanidinobutyrase K25365 gbh; guanidinobutyrase / D-arginase [EC:3.5.3.7 3.5.3.10] D A3L23_00446 gatA_1; Glutamyl-tRNA(Gln) amidotransferase subunit A K01426 E3.5.1.4; amidase [EC:3.5.1.4] D A3L23_00972 aam_1; Acylamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D A3L23_00979 gatA_2; Glutamyl-tRNA(Gln) amidotransferase subunit A K01426 E3.5.1.4; amidase [EC:3.5.1.4] D A3L23_02198 nylA; 6-aminohexanoate-cyclic-dimer hydrolase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D A3L23_03488 aam_2; Acylamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D A3L23_03797 amiA2; Putative amidase AmiA2 K01426 E3.5.1.4; amidase [EC:3.5.1.4] D A3L23_02801 proC_2; Pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D A3L23_00862 fadM; Proline dehydrogenase 1 K00318 PRODH; proline dehydrogenase [EC:1.5.5.2] D A3L23_00861 rocA1; 1-pyrroline-5-carboxylate dehydrogenase 1 K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88] D A3L23_03737 proB; Glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D A3L23_03757 proA_2; Gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] D A3L23_03367 pip_1; Proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5] D A3L23_03871 pip_2; Proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5] C 00340 Histidine metabolism [PATH:rfa00340] D A3L23_04268 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D A3L23_04269 hisE; Phosphoribosyl-ATP pyrophosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31] D A3L23_04016 hisI; Phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19] D A3L23_04013 priA_1; Phosphoribosyl isomerase A K24017 priA; phosphoribosyl isomerase A [EC:5.3.1.16 5.3.1.24] D A3L23_04011 hisH; Imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D A3L23_04015 hisF; Imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D A3L23_04009 hisB; Imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] D A3L23_02097 pat; Putative phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D A3L23_03861 putative aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D A3L23_04008 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D A3L23_04817 hisN; Histidinol-phosphatase K05602 hisN; histidinol-phosphatase [EC:3.1.3.15] D A3L23_04007 hisD; Histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] D A3L23_01007 ald_1; 3-succinoylsemialdehyde-pyridine dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D A3L23_02178 puo_2; Putrescine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4] D A3L23_01358 Putative aldehyde dehydrogenase K00129 ALDH3; aldehyde dehydrogenase (NAD(P)+) [EC:1.2.1.5] D A3L23_00519 egtD; Histidine-specific methyltransferase EgtD K18911 egtD; L-histidine Nalpha-methyltransferase [EC:2.1.1.44] D A3L23_00522 egtA; Glutamate--cysteine ligase GshA K01919 gshA; glutamate---cysteine ligase [EC:6.3.2.2] D A3L23_00521 egtB; Iron(II)-dependent oxidoreductase EgtB K18912 egtB; gamma-glutamyl hercynylcysteine S-oxide synthase [EC:1.14.99.50] D A3L23_00520 egtC; Amidohydrolase EgtC K07008 egtC; gamma-glutamyl hercynylcysteine S-oxide hydrolase [EC:3.5.1.118] C 00350 Tyrosine metabolism [PATH:rfa00350] D A3L23_02097 pat; Putative phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D A3L23_03861 putative aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D A3L23_04008 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D A3L23_02248 hpd; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D A3L23_02252 hmgA; Homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5] D A3L23_02250 hypothetical protein K01555 FAH; fumarylacetoacetase [EC:3.7.1.2] D A3L23_05009 ddc; L-2,4-diaminobutyrate decarboxylase K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105] D A3L23_02178 puo_2; Putrescine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4] D A3L23_02739 maoII; Copper methylamine oxidase K00276 AOC3; primary-amine oxidase [EC:1.4.3.21] D A3L23_01358 Putative aldehyde dehydrogenase K00129 ALDH3; aldehyde dehydrogenase (NAD(P)+) [EC:1.2.1.5] D A3L23_02217 styD; Phenylacetaldehyde dehydrogenase K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39] D A3L23_01149 adhT_1; Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D A3L23_01197 garL; 5-keto-4-deoxy-D-glucarate aldolase K02510 hpaI; 4-hydroxy-2-oxoheptanedioate aldolase [EC:4.1.2.52] D A3L23_00330 sad_1; Succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D A3L23_00617 sad_2; Succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D A3L23_01955 gabD2; Putative succinate-semialdehyde dehydrogenase [NADP(+)] 2 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D A3L23_03349 gabD1; Succinate-semialdehyde dehydrogenase [NADP(+)] 1 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D A3L23_03749 sad_4; Succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D A3L23_00946 xylB_1; Aryl-alcohol dehydrogenase K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90] D A3L23_05008 nagI; Gentisate 1,2-dioxygenase K00450 E1.13.11.4; gentisate 1,2-dioxygenase [EC:1.13.11.4] C 00360 Phenylalanine metabolism [PATH:rfa00360] D A3L23_05009 ddc; L-2,4-diaminobutyrate decarboxylase K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105] D A3L23_02739 maoII; Copper methylamine oxidase K00276 AOC3; primary-amine oxidase [EC:1.4.3.21] D A3L23_02178 puo_2; Putrescine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4] D A3L23_01358 Putative aldehyde dehydrogenase K00129 ALDH3; aldehyde dehydrogenase (NAD(P)+) [EC:1.2.1.5] D A3L23_02217 styD; Phenylacetaldehyde dehydrogenase K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39] D A3L23_02220 paaK; Phenylacetate-coenzyme A ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30] D A3L23_02233 paaI; Acyl-coenzyme A thioesterase PaaI K02614 paaI; acyl-CoA thioesterase [EC:3.1.2.-] D A3L23_02225 paaA; 1,2-phenylacetyl-CoA epoxidase, subunit A K02609 paaA; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA [EC:1.14.13.149] D A3L23_02224 paaB; 1,2-phenylacetyl-CoA epoxidase, subunit B K02610 paaB; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB D A3L23_02223 paaC; 1,2-phenylacetyl-CoA epoxidase, subunit C K02611 paaC; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaC [EC:1.14.13.149] D A3L23_02222 paaD; Putative 1,2-phenylacetyl-CoA epoxidase, subunit D K02612 paaD; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD D A3L23_02221 paaE; 1,2-phenylacetyl-CoA epoxidase, subunit E K02613 paaE; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE D A3L23_02226 paaG_1; 1,2-epoxyphenylacetyl-CoA isomerase K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18] D A3L23_04708 paaG_2; 1,2-epoxyphenylacetyl-CoA isomerase K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18] D A3L23_02231 paaZ_2; Bifunctional protein PaaZ K02618 paaZ; oxepin-CoA hydrolase / 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase [EC:3.3.2.12 1.2.1.91] D A3L23_03257 echA8_2; putative enoyl-CoA hydratase echA8 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D A3L23_04767 putative enoyl-CoA hydratase echA17 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D A3L23_00405 hbd_1; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D A3L23_01485 fadB2_1; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D A3L23_02227 hbd_2; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D A3L23_02747 fadB2_2; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D A3L23_02097 pat; Putative phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D A3L23_03861 putative aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D A3L23_04008 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D A3L23_00946 xylB_1; Aryl-alcohol dehydrogenase K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90] D A3L23_02248 hpd; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D A3L23_00372 katG; Catalase-peroxidase K03782 katG; catalase-peroxidase [EC:1.11.1.21] D A3L23_00960 katG2; Catalase-peroxidase 2 K03782 katG; catalase-peroxidase [EC:1.11.1.21] D A3L23_00446 gatA_1; Glutamyl-tRNA(Gln) amidotransferase subunit A K01426 E3.5.1.4; amidase [EC:3.5.1.4] D A3L23_00972 aam_1; Acylamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D A3L23_00979 gatA_2; Glutamyl-tRNA(Gln) amidotransferase subunit A K01426 E3.5.1.4; amidase [EC:3.5.1.4] D A3L23_02198 nylA; 6-aminohexanoate-cyclic-dimer hydrolase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D A3L23_03488 aam_2; Acylamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D A3L23_03797 amiA2; Putative amidase AmiA2 K01426 E3.5.1.4; amidase [EC:3.5.1.4] D A3L23_02132 hcaC; 3-phenylpropionate/cinnamic acid dioxygenase ferredoxin subunit K05710 hcaC; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin component D A3L23_01169 thcD_1; Rhodocoxin reductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] D A3L23_01317 bedA; Benzene 1,2-dioxygenase system ferredoxin--NAD(+) reductase subunit K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] D A3L23_03552 thcD_2; Rhodocoxin reductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] D A3L23_05141 camA; Putidaredoxin reductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] D A3L23_02166 mhpA; 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase K05712 mhpA; 3-(3-hydroxy-phenyl)propionate hydroxylase [EC:1.14.13.127] C 00380 Tryptophan metabolism [PATH:rfa00380] D A3L23_02295 kynA; Tryptophan 2,3-dioxygenase K00453 TDO2; tryptophan 2,3-dioxygenase [EC:1.13.11.11] D A3L23_02296 kynU; Kynureninase K01556 KYNU; kynureninase [EC:3.7.1.3] D A3L23_01025 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D A3L23_02243 pdhD; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D A3L23_02724 lpdC; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D A3L23_00134 acdA_1; Acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D A3L23_00311 acdA_2; Acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D A3L23_03257 echA8_2; putative enoyl-CoA hydratase echA8 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D A3L23_04767 putative enoyl-CoA hydratase echA17 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D A3L23_02185 fadB_3; Fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D A3L23_02334 fadJ; Fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D A3L23_00314 fadA_1; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A3L23_01384 fadI; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A3L23_02150 hypothetical protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A3L23_02333 fadA_2; Putative acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A3L23_02960 putative acetyl-CoA acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A3L23_03568 putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A3L23_03716 pcaF; Beta-ketoadipyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A3L23_05009 ddc; L-2,4-diaminobutyrate decarboxylase K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105] D A3L23_02178 puo_2; Putrescine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4] D A3L23_01007 ald_1; 3-succinoylsemialdehyde-pyridine dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D A3L23_00446 gatA_1; Glutamyl-tRNA(Gln) amidotransferase subunit A K01426 E3.5.1.4; amidase [EC:3.5.1.4] D A3L23_00972 aam_1; Acylamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D A3L23_00979 gatA_2; Glutamyl-tRNA(Gln) amidotransferase subunit A K01426 E3.5.1.4; amidase [EC:3.5.1.4] D A3L23_02198 nylA; 6-aminohexanoate-cyclic-dimer hydrolase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D A3L23_03488 aam_2; Acylamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D A3L23_03797 amiA2; Putative amidase AmiA2 K01426 E3.5.1.4; amidase [EC:3.5.1.4] D A3L23_01296 katE; Catalase HPII K03781 katE; catalase [EC:1.11.1.6] D A3L23_02373 katA; Catalase K03781 katE; catalase [EC:1.11.1.6] D A3L23_00372 katG; Catalase-peroxidase K03782 katG; catalase-peroxidase [EC:1.11.1.21] D A3L23_00960 katG2; Catalase-peroxidase 2 K03782 katG; catalase-peroxidase [EC:1.11.1.21] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:rfa00400] D A3L23_00740 aroG_1; Phospho-2-dehydro-3-deoxyheptonate aldolase, Phe-sensitive K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D A3L23_03927 aroG_2; Phospho-2-dehydro-3-deoxyheptonate aldolase AroG K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D A3L23_04383 aroB_2; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D A3L23_02968 aroQ; 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D A3L23_03715 lly; 4-hydroxyphenylpyruvate dioxygenase K26400 quiC1; 3-dehydroshikimate dehydratase [EC:4.2.1.118] D A3L23_03714 aroE_1; Quinate/shikimate dehydrogenase (NAD(+)) K25901 qsuD; quinate/shikimate dehydrogenase (NAD+) [EC:1.1.1.24] D A3L23_03248 Shikimate 5-dehydrogenase-like protein K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D A3L23_04384 aroK_2; Shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D A3L23_00023 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D A3L23_04385 aroC; Chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D A3L23_04019 trpE; Anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D A3L23_03910 trpD; Anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D A3L23_04013 priA_1; Phosphoribosyl isomerase A K24017 priA; phosphoribosyl isomerase A [EC:5.3.1.16 5.3.1.24] D A3L23_04021 trpC; Indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48] D A3L23_04023 trpA; Tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D A3L23_04022 trpB; Tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D A3L23_00616 Intracellular chorismate mutase K04093 pheA1; chorismate mutase [EC:5.4.99.5] D A3L23_03551 hypothetical protein K04093 pheA1; chorismate mutase [EC:5.4.99.5] D A3L23_02272 tyrA_2; Prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D A3L23_01992 pheA; Prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51] D A3L23_02097 pat; Putative phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D A3L23_03861 putative aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D A3L23_04008 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:rfa00410] D A3L23_00821 panD_1; Aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D A3L23_02515 panD_2; Aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D A3L23_01795 gadA; Glutamate decarboxylase alpha K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D A3L23_03747 davT; 5-aminovalerate aminotransferase DavT K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D A3L23_00331 gabT_1; 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D A3L23_03230 gabT_2; 4-aminobutyrate aminotransferase GabT K15372 toa; taurine---2-oxoglutarate transaminase [EC:2.6.1.55] D A3L23_02739 maoII; Copper methylamine oxidase K00276 AOC3; primary-amine oxidase [EC:1.4.3.21] D A3L23_01007 ald_1; 3-succinoylsemialdehyde-pyridine dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D A3L23_01358 Putative aldehyde dehydrogenase K00129 ALDH3; aldehyde dehydrogenase (NAD(P)+) [EC:1.2.1.5] D A3L23_02514 panC; Pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D A3L23_03228 D-hydantoinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D A3L23_04125 D-hydantoinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D A3L23_03227 N-carbamoyl-D-amino acid hydrolase K01431 UPB1; beta-ureidopropionase [EC:3.5.1.6] D A3L23_03257 echA8_2; putative enoyl-CoA hydratase echA8 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D A3L23_04767 putative enoyl-CoA hydratase echA17 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D A3L23_02185 fadB_3; Fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D A3L23_02334 fadJ; Fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D A3L23_02825 acrC_1; Acryloyl-CoA reductase (NADH) K00232 ACOX1_3; acyl-CoA oxidase [EC:1.3.3.6] D A3L23_03253 bauC_1; Putative 3-oxopropanoate dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D A3L23_03854 bauC_2; Putative 3-oxopropanoate dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] C 00430 Taurine and hypotaurine metabolism [PATH:rfa00430] D A3L23_01795 gadA; Glutamate decarboxylase alpha K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D A3L23_01659 ggt; Gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D A3L23_02603 tauD; Alpha-ketoglutarate-dependent taurine dioxygenase K03119 tauD; taurine dioxygenase [EC:1.14.11.17] D A3L23_01098 ald_2; Alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D A3L23_03230 gabT_2; 4-aminobutyrate aminotransferase GabT K15372 toa; taurine---2-oxoglutarate transaminase [EC:2.6.1.55] D A3L23_03689 gdh; NAD-specific glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D A3L23_02646 pta; Phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D A3L23_02647 ackA; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] C 00440 Phosphonate and phosphinate metabolism [PATH:rfa00440] D A3L23_03604 dadA; D-amino acid dehydrogenase K27877 pbfD; 2-(methylaminoethyl)phosphonate oxidase [EC:1.5.3.27] C 00450 Selenocompound metabolism [PATH:rfa00450] D A3L23_00310 metB; Cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D A3L23_04271 metH; Methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D A3L23_00741 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D A3L23_04330 csd_2; putative cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D A3L23_01807 trxB_1; Thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D A3L23_02686 trxB_2; Thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D A3L23_00092 xdhA_1; Xanthine dehydrogenase molybdenum-binding subunit K12528 xdhD; putative selenate reductase molybdopterin-binding subunit D A3L23_03783 cysNC; Bifunctional enzyme CysN/CysC K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D A3L23_03784 cysD; Sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D A3L23_00540 metG; Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:rfa00460] D A3L23_01659 ggt; Gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D A3L23_02709 ansA; L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D A3L23_02144 glyA2; Serine hydroxymethyltransferase 2 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D A3L23_03011 glyA1; Serine hydroxymethyltransferase 1 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D A3L23_01936 amdA; Acetamidase K01455 fmdA; formamidase [EC:3.5.1.49] D A3L23_03309 amiF; Formamidase K28761 amiF; formamidase [EC:3.5.1.49] C 00470 D-Amino acid metabolism [PATH:rfa00470] D A3L23_00200 alr; Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D A3L23_00898 ddl_1; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D A3L23_04714 ddl_2; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D A3L23_00369 glsA1_1; Glutaminase 1 K01425 glsA; glutaminase [EC:3.5.1.2] D A3L23_04457 glsA1_2; Glutaminase 1 K01425 glsA; glutaminase [EC:3.5.1.2] D A3L23_00799 purQ; Phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D A3L23_00309 murI; Glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D A3L23_03949 murD_2; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D A3L23_02194 ykfB; L-Ala-D/L-Glu epimerase K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25] D A3L23_04520 dapF; Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D A3L23_03267 lysA; Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D A3L23_00322 hcnC_1; Hydrogen cyanide synthase subunit HcnC K19746 dauA; D-arginine dehydrogenase [EC:1.4.99.6] D A3L23_00337 gbh; Guanidinobutyrase K25365 gbh; guanidinobutyrase / D-arginase [EC:3.5.3.7 3.5.3.10] D A3L23_04128 dapAL; putative DapA-like lyase K21062 lhpC; 1-pyrroline-4-hydroxy-2-carboxylate deaminase [EC:3.5.4.22] D A3L23_01460 Alpha-ketoglutaric semialdehyde dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26] C 00480 Glutathione metabolism [PATH:rfa00480] D A3L23_01659 ggt; Gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D A3L23_02541 hypothetical protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9] D A3L23_00962 ybdK; Putative glutamate--cysteine ligase 2 K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-] D A3L23_02669 Putative glutamate--cysteine ligase 2 K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-] D A3L23_00522 egtA; Glutamate--cysteine ligase GshA K01919 gshA; glutamate---cysteine ligase [EC:6.3.2.2] D A3L23_03890 pepA; putative cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D A3L23_02846 pepN_2; Aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D A3L23_03699 pepN_3; Aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D A3L23_03351 icd; Isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D A3L23_01821 gntZ; 6-phosphogluconate dehydrogenase, NAD(+)-dependent, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D A3L23_04188 gndA; 6-phosphogluconate dehydrogenase, NADP(+)-dependent, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D A3L23_02715 zwf; Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D A3L23_04344 zwf2; Glucose-6-phosphate 1-dehydrogenase 2 K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D A3L23_04552 zwf1_2; Glucose-6-phosphate 1-dehydrogenase 1 K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D A3L23_00805 gpx2; Hydroperoxy fatty acid reductase gpx2 K00432 gpx; glutathione peroxidase [EC:1.11.1.9] B B 09107 Glycan biosynthesis and metabolism C 00520 Amino sugar and nucleotide sugar metabolism [PATH:rfa00520] D A3L23_03243 crr; Glucose-specific phosphotransferase enzyme IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D A3L23_03245 ptsG; PTS system glucose-specific EIICB component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193] D A3L23_00511 glmU; Bifunctional protein GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D A3L23_03289 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D A3L23_02769 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D A3L23_01388 nagZ; Beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D A3L23_03246 nagA; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25] D A3L23_00207 glmM; Phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D A3L23_03247 nagB; Glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6] D A3L23_00202 glmS; Glutamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D A3L23_00698 kdgK_1; 2-dehydro-3-deoxygluconokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D A3L23_00618 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D A3L23_00041 manA; Mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D A3L23_01402 nanK; N-acetylmannosamine kinase K25026 glk; glucokinase [EC:2.7.1.2] D A3L23_03923 glkA; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D A3L23_04478 ppgK; Polyphosphate glucokinase K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63] D A3L23_04800 pgm; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D A3L23_00567 gtaB; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D A3L23_01254 ywqF; UDP-glucose 6-dehydrogenase YwqF K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D A3L23_01924 galK; Galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D A3L23_01923 galT; Galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] D A3L23_02804 galE_1; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D A3L23_04492 galE_2; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D A3L23_02020 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D A3L23_00043 algC; Phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D A3L23_00113 putative phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D A3L23_00050 hddC; D-glycero-alpha-D-manno-heptose 1-phosphate guanylyltransferase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D A3L23_03110 glgC; Glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D A3L23_01245 rmlA_1; Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D A3L23_02045 rmlA_2; Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] C 00541 Biosynthesis of various nucleotide sugars [PATH:rfa00541] D A3L23_00511 glmU; Bifunctional protein GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D A3L23_00567 gtaB; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D A3L23_01254 ywqF; UDP-glucose 6-dehydrogenase YwqF K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D A3L23_01245 rmlA_1; Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D A3L23_02045 rmlA_2; Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D A3L23_02049 rmlB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D A3L23_01244 rmlC_1; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D A3L23_02044 rmlC_2; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D A3L23_00052 rmlD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D A3L23_00050 hddC; D-glycero-alpha-D-manno-heptose 1-phosphate guanylyltransferase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis [PATH:rfa00515] D A3L23_00545 pmt; putative dolichyl-phosphate-mannose--protein mannosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109] C 00514 Other types of O-glycan biosynthesis [PATH:rfa00514] D A3L23_00545 pmt; putative dolichyl-phosphate-mannose--protein mannosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109] C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation D A3L23_01109 csxA; Exo-beta-D-glucosaminidase K01192 E3.2.1.25; beta-mannosidase [EC:3.2.1.25] C 00540 Lipopolysaccharide biosynthesis D A3L23_02052 lpxA; Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] C 00542 O-Antigen repeat unit biosynthesis [PATH:rfa00542] D A3L23_03277 wecA; Decaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 00550 Peptidoglycan biosynthesis [PATH:rfa00550] D A3L23_03289 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D A3L23_02769 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D A3L23_03952 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D A3L23_03949 murD_2; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D A3L23_00388 murE_1; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D A3L23_03946 murE_2; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D A3L23_00898 ddl_1; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D A3L23_04714 ddl_2; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D A3L23_03947 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D A3L23_03799 Trans,polycis-polyprenyl diphosphate synthase ((2Z,6E)-farnesyl diphosphate specific) K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D A3L23_04284 uppP; Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D A3L23_01888 mraY_1; Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D A3L23_03948 mraY_2; Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D A3L23_03951 murG_2; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D A3L23_01845 rodA_1; putative FtsW-like protein K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28] D A3L23_03950 ftsW; Putative lipid II flippase FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28] D A3L23_03945 pbpB; Penicillin-binding protein PbpB K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D A3L23_01844 pbpA_2; Penicillin-binding protein A K05364 pbpA; penicillin-binding protein A D A3L23_00138 dacF; D-alanyl-D-alanine carboxypeptidase DacF K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D A3L23_02502 dac; D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D A3L23_02356 murD_1; UDP-N-acetylmuramoylalanine--D-glutamate ligase K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13] D A3L23_02355 cobQ_1; Cobyric acid synthase K07009 gatD; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13] C 00552 Teichoic acid biosynthesis [PATH:rfa00552] D A3L23_04284 uppP; Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D A3L23_03277 wecA; Decaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium [PATH:rfa00572] D A3L23_03277 wecA; Decaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D A3L23_00051 wbbL_1; N-acetylglucosaminyl-diphospho-decaprenol L-rhamnosyltransferase K16870 wbbL; N-acetylglucosaminyl-diphospho-decaprenol L-rhamnosyltransferase [EC:2.4.1.289] D A3L23_02062 glfT1; Galactofuranosyl transferase GlfT1 K16649 glft1; rhamnopyranosyl-N-acetylglucosaminyl-diphospho-decaprenol beta-1,3/1,4-galactofuranosyltransferase [EC:2.4.1.287] D A3L23_02021 glfT2_1; Galactofuranosyl transferase GlfT2 K16650 glft2; galactofuranosylgalactofuranosylrhamnosyl-N-acetylglucosaminyl-diphospho-decaprenol beta-1,5/1,6-galactofuranosyltransferase [EC:2.4.1.288] D A3L23_02060 glfT2_2; Galactofuranosyl transferase GlfT2 K16650 glft2; galactofuranosylgalactofuranosylrhamnosyl-N-acetylglucosaminyl-diphospho-decaprenol beta-1,5/1,6-galactofuranosyltransferase [EC:2.4.1.288] D A3L23_02040 aftA; Arabinofuranosyltransferase AftA K13686 aftA; galactan 5-O-arabinofuranosyltransferase [EC:2.4.2.46] D A3L23_02024 aftB; Terminal beta-(1->2)-arabinofuranosyltransferase K13687 aftB; arabinofuranosyltransferase [EC:2.4.2.-] D A3L23_04438 Alpha-(1->3)-arabinofuranosyltransferase K16647 aftC; arabinofuranan 3-O-arabinosyltransferase [EC:2.4.2.47] D A3L23_02035 embB; putative arabinosyltransferase B K11386 embB; arabinosyltransferase B [EC:2.4.2.-] D A3L23_01391 aftD; Alpha-(1->3)-arabinofuranosyltransferase K16648 aftD; arabinofuranan 3-O-arabinosyltransferase [EC:2.4.2.-] D A3L23_00053 lytR_1; Transcriptional regulator LytR K27775 lcp1; cell wall biosynthesis protein D A3L23_02025 fbpB_1; Diacylglycerol acyltransferase/mycolyltransferase Ag85B K18851 fbp; diacylglycerol O-acyltransferase / trehalose O-mycolyltransferase / mycolyltransferase Ag85 [EC:2.3.1.20 2.3.1.122 2.3.1.-] D A3L23_02026 fbpB_2; Diacylglycerol acyltransferase/mycolyltransferase Ag85B K18851 fbp; diacylglycerol O-acyltransferase / trehalose O-mycolyltransferase / mycolyltransferase Ag85 [EC:2.3.1.20 2.3.1.122 2.3.1.-] C 00543 Exopolysaccharide biosynthesis [PATH:rfa00543] D A3L23_01249 cysE; Serine acetyltransferase K03819 wcaB; putative colanic acid biosynthesis acetyltransferase WcaB [EC:2.3.1.-] D A3L23_03277 wecA; Decaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D A3L23_04440 hypothetical protein K13665 gumL; pyruvyltransferase B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:rfa00730] D A3L23_02660 thiD; Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D A3L23_04755 iscS; IscS-like cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D A3L23_02653 hcnC_2; Hydrogen cyanide synthase subunit HcnC K03153 thiO; glycine oxidase [EC:1.4.3.19] D A3L23_04456 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D A3L23_02655 thiG; Thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10] D A3L23_00803 thiM; Hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50] D A3L23_02652 thiE; Thiamine-phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D A3L23_04711 thiL_2; Thiamine-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16] D A3L23_00024 rsgA_1; Putative ribosome biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D A3L23_01062 rsgA_2; Putative ribosome biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D A3L23_00231 adk; Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D A3L23_04897 Thiaminase-1 K10811 E2.5.1.2; thiamine pyridinylase [EC:2.5.1.2] D A3L23_03222 tenA; Aminopyrimidine aminohydrolase K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2] C 00740 Riboflavin metabolism [PATH:rfa00740] D A3L23_04358 ribBA; Riboflavin biosynthesis protein RibBA K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D A3L23_04360 ribD_1; Riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D A3L23_03091 ribH2; 6,7-dimethyl-8-ribityllumazine synthase 2 K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D A3L23_04357 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D A3L23_04359 ribE; Riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9] D A3L23_04599 ribF; Riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D A3L23_02553 bluB_1; 5,6-dimethylbenzimidazole synthase K04719 bluB; 5,6-dimethylbenzimidazole synthase [EC:1.13.11.79] D A3L23_00803 thiM; Hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50] C 00750 Vitamin B6 metabolism [PATH:rfa00750] D A3L23_00701 pdxH; Pyridoxine/pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5] D A3L23_00390 pdxK; Pyridoxine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35] D A3L23_00703 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D A3L23_03269 thrC; Threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D A3L23_04419 pdxS; Pyridoxal 5'-phosphate synthase subunit PdxS K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6] D A3L23_04416 pdxT; Pyridoxal 5'-phosphate synthase subunit PdxT K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6] C 00760 Nicotinate and nicotinamide metabolism [PATH:rfa00760] D A3L23_03997 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D A3L23_03996 nadA; Quinolinate synthase A K03517 nadA; quinolinate synthase [EC:2.5.1.72] D A3L23_03998 nadC; Nicotinate-nucleotide pyrophosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] D A3L23_03576 pncB1; Nicotinate phosphoribosyltransferase pncB1 K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D A3L23_00112 punA; Purine nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1] D A3L23_02448 surE; 5'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D A3L23_02608 nagD_2; Ribonucleotide monophosphatase NagD K02566 nagD; 5'-nucleotidase [EC:3.1.3.5] D A3L23_03760 nadD; putative nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D A3L23_00506 mazG; Nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D A3L23_04838 nudC_3; NADH pyrophosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22] D A3L23_00957 nadE_1; NH(3)-dependent NAD(+) synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5] D A3L23_04788 nadE_3; NH(3)-dependent NAD(+) synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5] D A3L23_03874 nadE_2; Glutamine-dependent NAD(+) synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1] D A3L23_00958 cinA_2; CinA-like protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42] D A3L23_02713 hypothetical protein K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-] D A3L23_03984 cobB_2; NAD-dependent protein deacylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313] D A3L23_04092 ppnK; NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] D A3L23_04497 sthA; putative soluble pyridine nucleotide transhydrogenase K00322 sthA; NAD(P) transhydrogenase [EC:1.6.1.1] D A3L23_03235 pntAA; NAD(P) transhydrogenase subunit alpha part 1 K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D A3L23_03236 pntA; NAD(P) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D A3L23_03237 pntB; NAD(P) transhydrogenase subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1] D A3L23_03312 nicX; 2,5-dihydroxypyridine 5,6-dioxygenase K18028 nicX; 2,5-dihydroxypyridine 5,6-dioxygenase [EC:1.13.11.9] D A3L23_00330 sad_1; Succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D A3L23_00617 sad_2; Succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D A3L23_01955 gabD2; Putative succinate-semialdehyde dehydrogenase [NADP(+)] 2 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D A3L23_03349 gabD1; Succinate-semialdehyde dehydrogenase [NADP(+)] 1 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D A3L23_03749 sad_4; Succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00770 Pantothenate and CoA biosynthesis [PATH:rfa00770] D A3L23_04735 ilvB1; Acetolactate synthase large subunit IlvB1 K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D A3L23_04734 ilvH; Acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D A3L23_04733 ilvC; Ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D A3L23_01532 ilvD_1; Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D A3L23_04737 ilvD_2; Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D A3L23_03873 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D A3L23_02514 panC; Pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D A3L23_03009 coaA_2; Pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33] D A3L23_02516 coaX; Type III pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33] D A3L23_04368 coaBC; Coenzyme A biosynthesis bifunctional protein CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D A3L23_00506 mazG; Nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D A3L23_04701 coaD; Phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D A3L23_04052 coaE; Dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D A3L23_03592 acpS; Holo-[acyl-carrier-protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D A3L23_04605 npt; 4'-phosphopantetheinyl transferase Npt K02362 entD; enterobactin synthetase component D / holo-[acyl-carrier protein] synthase [EC:6.3.2.14 2.7.8.7] D A3L23_04606 hypothetical protein K28885 pptH; [acyl-carrier-protein] phosphodiesterase [EC:3.1.4.14] D A3L23_01945 ilvE_1; Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D A3L23_03892 ilvE_2; Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D A3L23_03228 D-hydantoinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D A3L23_04125 D-hydantoinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D A3L23_03227 N-carbamoyl-D-amino acid hydrolase K01431 UPB1; beta-ureidopropionase [EC:3.5.1.6] D A3L23_00821 panD_1; Aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D A3L23_02515 panD_2; Aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D A3L23_01007 ald_1; 3-succinoylsemialdehyde-pyridine dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00780 Biotin metabolism [PATH:rfa00780] D A3L23_00416 fabF_1; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D A3L23_00443 fabG_4; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D A3L23_01385 fabG_8; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D A3L23_01487 novJ; Short-chain reductase protein NovJ K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D A3L23_01608 ped; (S)-1-Phenylethanol dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D A3L23_04593 budC_3; Diacetyl reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D A3L23_02829 bioF_2; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D A3L23_02929 bioF_3; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D A3L23_02828 bioA; Adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D A3L23_02830 bioD; ATP-dependent dethiobiotin synthetase BioD K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3] D A3L23_03992 bioB; Biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6] D A3L23_00062 birA; Bifunctional ligase/repressor BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D A3L23_04442 dorA; Dimethyl sulfoxide/trimethylamine N-oxide reductase K08351 bisC; biotin/methionine sulfoxide reductase [EC:1.-.-.-] D A3L23_00098 bioF_1; 8-amino-7-oxononanoate synthase K00654 SPT; serine palmitoyltransferase [EC:2.3.1.50] C 00785 Lipoic acid metabolism [PATH:rfa00785] D A3L23_03886 lipB; Octanoyltransferase K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181] D A3L23_03885 lipA_2; Lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8] D A3L23_01025 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D A3L23_02243 pdhD; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D A3L23_02724 lpdC; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D A3L23_01325 aceE_1; Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D A3L23_03837 aceE_2; Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D A3L23_01014 pdhC_2; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D A3L23_03888 dlaT; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D A3L23_03146 kgd; Multifunctional 2-oxoglutarate metabolism enzyme K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61] D A3L23_00327 bkdA_1; 3-methyl-2-oxobutanoate dehydrogenase subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D A3L23_02246 bkdA_2; 3-methyl-2-oxobutanoate dehydrogenase subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D A3L23_00326 bkdB_1; 3-methyl-2-oxobutanoate dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D A3L23_02245 bkdB_2; 3-methyl-2-oxobutanoate dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D A3L23_00325 pdhC_1; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D A3L23_02244 bkdC; Dihydrolipoyllysine-residue acyltransferase component of branched-chain alpha-ketoacid dehydrogenase complex K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D A3L23_04177 gcvP; putative glycine dehydrogenase (decarboxylating) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D A3L23_03891 gcvT_2; Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D A3L23_02138 gcvH_1; Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D A3L23_04172 gcvH_2; Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:rfa00790] D A3L23_02507 folE; GTP cyclohydrolase 1 K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16] D A3L23_02210 phoD_1; Alkaline phosphatase D K01113 phoD; alkaline phosphatase D [EC:3.1.3.1] D A3L23_02940 phoD_2; Alkaline phosphatase D K01113 phoD; alkaline phosphatase D [EC:3.1.3.1] D A3L23_03192 pld; Phospholipase D K01113 phoD; alkaline phosphatase D [EC:3.1.3.1] D A3L23_02509 folB; putative dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D A3L23_02510 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D A3L23_02139 folP; Dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D A3L23_02508 folP1; Dihydropteroate synthase 1 K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D A3L23_00637 folA; Dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D A3L23_03730 fgs; Folylpolyglutamate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D A3L23_04358 ribBA; Riboflavin biosynthesis protein RibBA K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D A3L23_01841 trpG; Anthranilate synthase component 2 K01664 pabA; para-aminobenzoate synthetase component II [EC:2.6.1.85] D A3L23_04227 pabB; Aminodeoxychorismate synthase component 1 K13950 pabAB; para-aminobenzoate synthetase [EC:2.6.1.85] D A3L23_00779 pabC; Aminodeoxychorismate lyase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38] D A3L23_03064 Putative pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D A3L23_04790 moaA2; Cyclic pyranopterin monophosphate synthase 2 K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D A3L23_04792 moaC2; Cyclic pyranopterin monophosphate synthase accessory protein 2 K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D A3L23_04793 moaE2_2; Molybdopterin synthase catalytic subunit 2 K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D A3L23_00566 moeA1; Molybdopterin molybdenumtransferase 1 K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D A3L23_04791 moaE2_1; Molybdopterin molybdenumtransferase 2 K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] C 00670 One carbon pool by folate [PATH:rfa00670] D A3L23_00637 folA; Dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D A3L23_00154 folD_1; Bifunctional protein FolD protein K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D A3L23_02127 folD_2; Bifunctional protein FolD protein K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D A3L23_02144 glyA2; Serine hydroxymethyltransferase 2 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D A3L23_03011 glyA1; Serine hydroxymethyltransferase 1 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D A3L23_00603 purN_1; Phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D A3L23_00602 purH; Bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D A3L23_03891 gcvT_2; Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D A3L23_04271 metH; Methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D A3L23_00636 thyA; Thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D A3L23_04549 thyX; Thymidylate synthase ThyX K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] D A3L23_02136 purU_1; Formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D A3L23_02761 purU_2; Formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D A3L23_03934 metF; 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D A3L23_00568 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] D A3L23_04367 metK; S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D A3L23_00038 ahcY; Adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D A3L23_02135 dmg_1; Dimethylglycine oxidase K00309 dmg; dimethylglycine oxidase [EC:1.5.3.10] D A3L23_04177 gcvP; putative glycine dehydrogenase (decarboxylating) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D A3L23_01025 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D A3L23_02243 pdhD; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D A3L23_02724 lpdC; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D A3L23_02138 gcvH_1; Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D A3L23_04172 gcvH_2; Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D A3L23_04564 codA; Choline oxidase K17755 codA; choline oxidase [EC:1.1.3.17] D A3L23_00125 prr_1; Gamma-aminobutyraldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8] D A3L23_04566 gbsA; Betaine aldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8] D A3L23_00312 cbs; Putative cystathionine beta-synthase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:rfa00860] D A3L23_02300 gluQ; Glutamyl-Q tRNA(Asp) synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D A3L23_04728 gltX; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D A3L23_02810 hemA; Glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70] D A3L23_02833 hemL; Glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D A3L23_02814 hemB; Delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D A3L23_02811 hemC; Porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D A3L23_00673 hypothetical protein K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75] D A3L23_04848 hypothetical protein K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75] D A3L23_04446 hemE; Uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] D A3L23_01152 hypothetical protein K00230 hemG; menaquinone-dependent protoporphyrinogen oxidase [EC:1.3.5.3] D A3L23_04445 hemY; Protoporphyrinogen oxidase K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15] D A3L23_04314 hemH; Ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] D A3L23_04444 cld; Chlorite dismutase K00435 hemQ; hydrogen peroxide-dependent heme synthase [EC:1.3.98.5] D A3L23_02813 cysG; Siroheme synthase K13542 cobA-hemD; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75] D A3L23_04629 nasF; Uroporphyrinogen-III C-methyltransferase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4] D A3L23_04341 ctaB; Protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D A3L23_04338 ctaA; Heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9] D A3L23_04243 cobIJ; Cobalamin biosynthesis protein CobIJ K13540 cobIJ; precorrin-2 C20-methyltransferase / precorrin-3B C17-methyltransferase [EC:2.1.1.130 2.1.1.131] D A3L23_04241 hypothetical protein K02229 cobG; precorrin-3B synthase [EC:1.14.13.83] D A3L23_02018 cobM; Precorrin-4 C(11)-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271] D A3L23_04632 hypothetical protein K02189 cbiG; cobalt-precorrin 5A hydrolase [EC:3.7.1.12] D A3L23_02019 hypothetical protein K02228 cobF; precorrin-6A synthase [EC:2.1.1.152] D A3L23_04244 cobK; Precorrin-6A reductase K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106] D A3L23_04245 cobL; Precorrin-6Y C(5,15)-methyltransferase K00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase / cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196] D A3L23_04242 cobH; Precorrin-8X methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60] D A3L23_04633 cobB_3; Hydrogenobyrinate a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11] D A3L23_04240 cobN; Aerobic cobaltochelatase subunit CobN K02230 cobN; cobaltochelatase CobN [EC:6.6.1.2] D A3L23_03288 Cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D A3L23_04634 cobO; Cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D A3L23_04644 cobQ_2; Cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10] D A3L23_03857 cobD; Cobalamin biosynthesis protein CobD K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10] D A3L23_03895 cobU; Bifunctional adenosylcobalamin biosynthesis protein CobU K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62] D A3L23_03893 cobS; Adenosylcobinamide-GDP ribazoletransferase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26] D A3L23_03894 cobT; Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21] D A3L23_03864 pspA_5; Phosphoserine phosphatase 1 K22316 rhnA-cobC; ribonuclease H / adenosylcobalamin/alpha-ribazole phosphatase [EC:3.1.26.4 3.1.3.73] D A3L23_04635 bchI; Magnesium-chelatase 38 kDa subunit K03404 chlD; magnesium chelatase subunit D [EC:6.6.1.1] D A3L23_00600 hypothetical protein K03405 chlI; magnesium chelatase subunit I [EC:6.6.1.1] D A3L23_04206 hypothetical protein K07226 hutZ; heme oxygenase (biliverdin-IX-beta and delta-forming) [EC:1.14.99.58] D A3L23_04247 hypothetical protein K23825 K23825; F420H(2)-dependent biliverdin reductase [EC:1.3.98.-] D A3L23_01986 bfrB_1; Ferritin BfrB K22336 bfrB; bacterioferritin B [EC:1.16.3.1] D A3L23_01987 bfrB_2; Ferritin BfrB K22336 bfrB; bacterioferritin B [EC:1.16.3.1] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:rfa00130] D A3L23_02886 menG_4; Demethylmenaquinone methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D A3L23_02607 menF; Putative isochorismate synthase MenF K02361 entC; isochorismate synthase [EC:5.4.4.2] D A3L23_02881 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9] D A3L23_02875 menC; o-succinylbenzoate synthase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113] D A3L23_02864 menE; putative 2-succinylbenzoate--CoA ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26] D A3L23_02873 menB; 1,4-dihydroxy-2-naphthoyl-CoA synthase K01661 menB; naphthoate synthase [EC:4.1.3.36] D A3L23_04198 Putative esterase K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28] D A3L23_04845 Putative esterase K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28] D A3L23_02854 menA_1; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] D A3L23_00974 kefF_1; Glutathione-regulated potassium-efflux system ancillary protein KefF K00355 NQO1; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D A3L23_01268 kefF_2; Glutathione-regulated potassium-efflux system ancillary protein KefF K00355 NQO1; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D A3L23_00976 NAD(P)H dehydrogenase (quinone) K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D A3L23_00870 qorB; Quinone oxidoreductase 2 K19267 qorB; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D A3L23_02248 hpd; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:rfa00900] D A3L23_04456 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D A3L23_04651 dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D A3L23_02535 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] D A3L23_00534 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D A3L23_02536 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] D A3L23_04649 ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D A3L23_03022 ispH1; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 1 K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D A3L23_00314 fadA_1; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A3L23_01384 fadI; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A3L23_02150 hypothetical protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A3L23_02333 fadA_2; Putative acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A3L23_02960 putative acetyl-CoA acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A3L23_03568 putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A3L23_03716 pcaF; Beta-ketoadipyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A3L23_04166 idi; Isopentenyl-diphosphate Delta-isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2] D A3L23_03933 sdsA; All-trans-nonaprenyl-diphosphate synthase (geranyl-diphosphate specific) K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29] D A3L23_03008 uppS; (2Z,6E)-farnesyl diphosphate synthase K12503 uppS; short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68] D A3L23_03799 Trans,polycis-polyprenyl diphosphate synthase ((2Z,6E)-farnesyl diphosphate specific) K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis [PATH:rfa00906] D A3L23_03930 crtB; All-trans-phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32] D A3L23_03932 crtI_1; Phytoene desaturase (lycopene-forming) K10027 crtI; phytoene desaturase [EC:1.3.99.26 1.3.99.28 1.3.99.29 1.3.99.31] D A3L23_04326 crtL; Lycopene beta cyclase K06443 lcyB; lycopene beta-cyclase [EC:5.5.1.19] D A3L23_01906 pds; 15-cis-phytoene desaturase K09879 crtU; carotenoid phi-ring synthase / carotenoid chi-ring synthase [EC:1.3.99.39 1.3.99.40] C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation [PATH:rfa00903] D A3L23_01007 ald_1; 3-succinoylsemialdehyde-pyridine dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D A3L23_03013 ephG; Epoxide hydrolase EphG K10533 E3.3.2.8; limonene-1,2-epoxide hydrolase [EC:3.3.2.8] C 00907 Pinene, camphor and geraniol degradation [PATH:rfa00907] D A3L23_03257 echA8_2; putative enoyl-CoA hydratase echA8 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D A3L23_04767 putative enoyl-CoA hydratase echA17 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D A3L23_02185 fadB_3; Fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D A3L23_02334 fadJ; Fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D A3L23_00630 ccl; (R)-citramalyl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D A3L23_01259 yngG; Hydroxymethylglutaryl-CoA lyase YngG K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D A3L23_04449 paaJ_2; 3-oxoadipyl-CoA/3-oxo-5,6-dehydrosuberyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D A3L23_00405 hbd_1; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D A3L23_01712 fas2_1; Ferredoxin fas2 K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D A3L23_04342 tkt; Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D A3L23_04943 fas2_2; Ferredoxin fas2 K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis [PATH:rfa00523] D A3L23_01245 rmlA_1; Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D A3L23_02045 rmlA_2; Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D A3L23_02049 rmlB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D A3L23_01244 rmlC_1; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D A3L23_02044 rmlC_2; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D A3L23_00052 rmlD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D A3L23_01365 wbiB_2; dTDP-L-rhamnose 4-epimerase K17947 wbiB; dTDP-L-rhamnose 4-epimerase [EC:5.1.3.25] C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides [PATH:rfa01053] D A3L23_02607 menF; Putative isochorismate synthase MenF K02361 entC; isochorismate synthase [EC:5.4.4.2] D A3L23_04605 npt; 4'-phosphopantetheinyl transferase Npt K02362 entD; enterobactin synthetase component D / holo-[acyl-carrier protein] synthase [EC:6.3.2.14 2.7.8.7] D A3L23_00822 mbtI; Salicylate synthase K04781 mbtI; salicylate synthetase [EC:5.4.4.2 4.2.99.21] D A3L23_00827 dhbE; 2,3-dihydroxybenzoate-AMP ligase K04787 mbtA; mycobactin salicyl-AMP ligase [EC:6.3.2.-] D A3L23_00828 mbtB; Phenyloxazoline synthase MbtB K04788 mbtB; mycobactin phenyloxazoline synthetase C 01055 Biosynthesis of vancomycin group antibiotics D A3L23_02049 rmlB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism D A3L23_00088 uox; Uricase K00365 uaZ; urate oxidase [EC:1.7.3.3] C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis D A3L23_02154 blaF; Beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6] C 00332 Carbapenem biosynthesis [PATH:rfa00332] D A3L23_03737 proB; Glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D A3L23_03757 proA_2; Gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00261 Monobactam biosynthesis [PATH:rfa00261] D A3L23_01051 hypothetical protein K05375 mbtH; MbtH protein D A3L23_04975 hypothetical protein K05375 mbtH; MbtH protein D A3L23_03783 cysNC; Bifunctional enzyme CysN/CysC K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D A3L23_03784 cysD; Sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D A3L23_02362 ask; Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D A3L23_02363 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D A3L23_01185 dapA_1; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D A3L23_04209 dapA_2; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D A3L23_04548 dapA_3; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D A3L23_04559 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:rfa00521] D A3L23_01402 nanK; N-acetylmannosamine kinase K25026 glk; glucokinase [EC:2.7.1.2] D A3L23_03923 glkA; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D A3L23_04800 pgm; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D A3L23_01758 ino1; Inositol-3-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4] D A3L23_04014 impA; Inositol-1-monophosphatase ImpA K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D A3L23_04477 suhB; Inositol-1-monophosphatase SuhB K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D A3L23_01245 rmlA_1; Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D A3L23_02045 rmlA_2; Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D A3L23_02049 rmlB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D A3L23_01244 rmlC_1; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D A3L23_02044 rmlC_2; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D A3L23_00052 rmlD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 00524 Neomycin, kanamycin and gentamicin biosynthesis D A3L23_01402 nanK; N-acetylmannosamine kinase K25026 glk; glucokinase [EC:2.7.1.2] D A3L23_03923 glkA; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2] C 00525 Acarbose and validamycin biosynthesis [PATH:rfa00525] D A3L23_01245 rmlA_1; Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D A3L23_02045 rmlA_2; Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D A3L23_02049 rmlB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis [PATH:rfa00401] D A3L23_02272 tyrA_2; Prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D A3L23_02097 pat; Putative phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D A3L23_03861 putative aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D A3L23_04008 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis [PATH:rfa00405] D A3L23_00644 phzD; putative isochorismatase K20261 phzD; trans-2,3-dihydro-3-hydroxyanthranilic acid synthase [EC:3.3.2.15] D A3L23_04019 trpE; Anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis D A3L23_03835 fabD; Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D A3L23_00443 fabG_4; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D A3L23_01385 fabG_8; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D A3L23_01487 novJ; Short-chain reductase protein NovJ K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D A3L23_01608 ped; (S)-1-Phenylethanol dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D A3L23_04593 budC_3; Diacetyl reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] C 00254 Aflatoxin biosynthesis C 00975 Biosynthesis of various siderophores D A3L23_03740 ectB; Diaminobutyrate--2-oxoglutarate transaminase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76] C 00998 Biosynthesis of various antibiotics D A3L23_03834 acpM; Meromycolate extension acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites [PATH:rfa00999] D A3L23_04367 metK; S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D A3L23_03248 Shikimate 5-dehydrogenase-like protein K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] C 00997 Biosynthesis of various other secondary metabolites D A3L23_03933 sdsA; All-trans-nonaprenyl-diphosphate synthase (geranyl-diphosphate specific) K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29] B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:rfa00362] D A3L23_02195 clcA; Chlorocatechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1] D A3L23_02196 catC; Muconolactone Delta-isomerase K03464 catC; muconolactone D-isomerase [EC:5.3.3.4] D A3L23_03718 catD; 3-oxoadipate enol-lactonase 2 K14727 pcaL; 3-oxoadipate enol-lactonase / 4-carboxymuconolactone decarboxylase [EC:3.1.1.24 4.1.1.44] D A3L23_04449 paaJ_2; 3-oxoadipyl-CoA/3-oxo-5,6-dehydrosuberyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D A3L23_03379 npcC; Hydroxyquinol 1,2-dioxygenase K04098 chqB; hydroxyquinol 1,2-dioxygenase [EC:1.13.11.37] D A3L23_03380 tfdF; Maleylacetate reductase K00217 E1.3.1.32; maleylacetate reductase [EC:1.3.1.32] D A3L23_03720 pcaG; Protocatechuate 3,4-dioxygenase alpha chain K00448 pcaG; protocatechuate 3,4-dioxygenase, alpha subunit [EC:1.13.11.3] D A3L23_03721 pcaH; Protocatechuate 3,4-dioxygenase beta chain K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3] D A3L23_03719 pcaB; 3-carboxy-cis,cis-muconate cycloisomerase K01857 pcaB; 3-carboxy-cis,cis-muconate cycloisomerase [EC:5.5.1.2] D A3L23_01169 thcD_1; Rhodocoxin reductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] D A3L23_01317 bedA; Benzene 1,2-dioxygenase system ferredoxin--NAD(+) reductase subunit K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] D A3L23_03552 thcD_2; Rhodocoxin reductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] D A3L23_05141 camA; Putidaredoxin reductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] D A3L23_05143 fdxE; Ferredoxin-6 K04755 fdx; ferredoxin, 2Fe-2S D A3L23_02192 pobA; p-hydroxybenzoate hydroxylase K00481 pobA; p-hydroxybenzoate 3-monooxygenase [EC:1.14.13.2] D A3L23_03176 acdA_7; Acyl-CoA dehydrogenase K04118 pimC; pimeloyl-CoA dehydrogenase large subunit [EC:1.3.1.62] D A3L23_03177 bcd_1; Acyl-CoA dehydrogenase, short-chain specific K28556 pimD; pimeloyl-CoA dehydrogenase small subunit [EC:1.3.1.62] D A3L23_02185 fadB_3; Fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D A3L23_02334 fadJ; Fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D A3L23_00134 acdA_1; Acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D A3L23_00311 acdA_2; Acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D A3L23_03257 echA8_2; putative enoyl-CoA hydratase echA8 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D A3L23_04767 putative enoyl-CoA hydratase echA17 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D A3L23_01591 fadB_2; putative enoyl-CoA hydratase K13767 fadB; enoyl-CoA hydratase [EC:4.2.1.17] D A3L23_00405 hbd_1; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D A3L23_01485 fadB2_1; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D A3L23_02227 hbd_2; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D A3L23_02747 fadB2_2; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D A3L23_00314 fadA_1; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A3L23_01384 fadI; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A3L23_02150 hypothetical protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A3L23_02333 fadA_2; Putative acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A3L23_02960 putative acetyl-CoA acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A3L23_03568 putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A3L23_03716 pcaF; Beta-ketoadipyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00627 Aminobenzoate degradation [PATH:rfa00627] D A3L23_02444 ethA_2; FAD-containing monooxygenase EthA K10215 ethA; monooxygenase [EC:1.14.13.-] D A3L23_00446 gatA_1; Glutamyl-tRNA(Gln) amidotransferase subunit A K01426 E3.5.1.4; amidase [EC:3.5.1.4] D A3L23_00972 aam_1; Acylamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D A3L23_00979 gatA_2; Glutamyl-tRNA(Gln) amidotransferase subunit A K01426 E3.5.1.4; amidase [EC:3.5.1.4] D A3L23_02198 nylA; 6-aminohexanoate-cyclic-dimer hydrolase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D A3L23_03488 aam_2; Acylamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D A3L23_03797 amiA2; Putative amidase AmiA2 K01426 E3.5.1.4; amidase [EC:3.5.1.4] D A3L23_04693 acyP; Acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D A3L23_00936 Long-chain-fatty-acid--CoA ligase FadD13 K12508 fcs; trans-feruloyl-CoA synthase [EC:6.2.1.34] D A3L23_03257 echA8_2; putative enoyl-CoA hydratase echA8 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D A3L23_04767 putative enoyl-CoA hydratase echA17 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] C 00364 Fluorobenzoate degradation [PATH:rfa00364] D A3L23_02195 clcA; Chlorocatechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1] D A3L23_01596 clcD; Carboxymethylenebutenolidase K01061 clcD; carboxymethylenebutenolidase [EC:3.1.1.45] D A3L23_03380 tfdF; Maleylacetate reductase K00217 E1.3.1.32; maleylacetate reductase [EC:1.3.1.32] C 00625 Chloroalkane and chloroalkene degradation [PATH:rfa00625] D A3L23_01149 adhT_1; Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D A3L23_01007 ald_1; 3-succinoylsemialdehyde-pyridine dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D A3L23_00417 fdhA; Glutathione-independent formaldehyde dehydrogenase K00148 fdhA; glutathione-independent formaldehyde dehydrogenase [EC:1.2.1.46] D A3L23_00307 Methanol:N,N-dimethyl-4-nitrosoaniline oxidoreductase K17067 mdo; formaldehyde dismutase / methanol dehydrogenase [EC:1.2.98.1 1.1.99.37] D A3L23_00078 dhlB; (S)-2-haloacid dehalogenase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] D A3L23_03069 hdl_IVa; (S)-2-haloacid dehalogenase 4A K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:rfa00361] D A3L23_02195 clcA; Chlorocatechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1] D A3L23_01596 clcD; Carboxymethylenebutenolidase K01061 clcD; carboxymethylenebutenolidase [EC:3.1.1.45] D A3L23_03380 tfdF; Maleylacetate reductase K00217 E1.3.1.32; maleylacetate reductase [EC:1.3.1.32] D A3L23_03379 npcC; Hydroxyquinol 1,2-dioxygenase K04098 chqB; hydroxyquinol 1,2-dioxygenase [EC:1.13.11.37] D A3L23_00078 dhlB; (S)-2-haloacid dehalogenase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] D A3L23_03069 hdl_IVa; (S)-2-haloacid dehalogenase 4A K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] C 00623 Toluene degradation [PATH:rfa00623] D A3L23_00946 xylB_1; Aryl-alcohol dehydrogenase K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90] D A3L23_02195 clcA; Chlorocatechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1] D A3L23_01596 clcD; Carboxymethylenebutenolidase K01061 clcD; carboxymethylenebutenolidase [EC:3.1.1.45] D A3L23_03380 tfdF; Maleylacetate reductase K00217 E1.3.1.32; maleylacetate reductase [EC:1.3.1.32] C 00622 Xylene degradation [PATH:rfa00622] D A3L23_00946 xylB_1; Aryl-alcohol dehydrogenase K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90] C 00633 Nitrotoluene degradation [PATH:rfa00633] D A3L23_00881 nemA; N-ethylmaleimide reductase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-] C 00642 Ethylbenzene degradation D A3L23_04449 paaJ_2; 3-oxoadipyl-CoA/3-oxo-5,6-dehydrosuberyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 00643 Styrene degradation [PATH:rfa00643] D A3L23_02217 styD; Phenylacetaldehyde dehydrogenase K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39] D A3L23_02252 hmgA; Homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5] D A3L23_02250 hypothetical protein K01555 FAH; fumarylacetoacetase [EC:3.7.1.2] D A3L23_00446 gatA_1; Glutamyl-tRNA(Gln) amidotransferase subunit A K01426 E3.5.1.4; amidase [EC:3.5.1.4] D A3L23_00972 aam_1; Acylamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D A3L23_00979 gatA_2; Glutamyl-tRNA(Gln) amidotransferase subunit A K01426 E3.5.1.4; amidase [EC:3.5.1.4] D A3L23_02198 nylA; 6-aminohexanoate-cyclic-dimer hydrolase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D A3L23_03488 aam_2; Acylamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D A3L23_03797 amiA2; Putative amidase AmiA2 K01426 E3.5.1.4; amidase [EC:3.5.1.4] C 00791 Atrazine degradation [PATH:rfa00791] D A3L23_01648 atzF; Allophanate hydrolase K01457 atzF; allophanate hydrolase [EC:3.5.1.54] D A3L23_01647 kipA_1; KipI antagonist K01941 uca; urea/guanidine carboxylase [EC:6.3.4.6 6.3.4.26] D A3L23_01645 hypothetical protein K28692 cgdA; carboxyguanidine deiminase [EC:3.5.1.140] D A3L23_01646 hypothetical protein K28693 cgdB; carboxyguanidine deiminase [EC:3.5.1.140] D A3L23_04201 ureC; Urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5] D A3L23_04200 ureA; Urease subunit alpha K14048 ureAB; urease subunit gamma/beta [EC:3.5.1.5] C 00930 Caprolactam degradation [PATH:rfa00930] D A3L23_00039 alkB_1; Alkane 1-monooxygenase K00496 alkB1_2; alkane 1-monooxygenase [EC:1.14.15.3] D A3L23_01166 alkB_2; Alkane 1-monooxygenase K00496 alkB1_2; alkane 1-monooxygenase [EC:1.14.15.3] D A3L23_01600 alkB_3; Alkane 1-monooxygenase K00496 alkB1_2; alkane 1-monooxygenase [EC:1.14.15.3] D A3L23_00975 mmgC_2; Acyl-CoA dehydrogenase K06446 DCAA; acyl-CoA dehydrogenase [EC:1.3.99.-] D A3L23_03257 echA8_2; putative enoyl-CoA hydratase echA8 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D A3L23_04767 putative enoyl-CoA hydratase echA17 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D A3L23_02185 fadB_3; Fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D A3L23_02334 fadJ; Fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D A3L23_00405 hbd_1; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] C 00363 Bisphenol degradation D A3L23_03397 hapE_2; 4-hydroxyacetophenone monooxygenase K14520 hapE; 4-hydroxyacetophenone monooxygenase [EC:1.14.13.84] C 00621 Dioxin degradation C 00626 Naphthalene degradation [PATH:rfa00626] D A3L23_01149 adhT_1; Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] C 00624 Polycyclic aromatic hydrocarbon degradation D A3L23_03720 pcaG; Protocatechuate 3,4-dioxygenase alpha chain K00448 pcaG; protocatechuate 3,4-dioxygenase, alpha subunit [EC:1.13.11.3] D A3L23_03721 pcaH; Protocatechuate 3,4-dioxygenase beta chain K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3] C 00365 Furfural degradation C 00984 Steroid degradation [PATH:rfa00984] D A3L23_00184 choD_1; Cholesterol oxidase K03333 choD; cholesterol oxidase [EC:1.1.3.6] D A3L23_01299 choA_1; Cholesterol oxidase K03333 choD; cholesterol oxidase [EC:1.1.3.6] D A3L23_01313 choB; Cholesterol oxidase K03333 choD; cholesterol oxidase [EC:1.1.3.6] D A3L23_02371 choD_2; Cholesterol oxidase K03333 choD; cholesterol oxidase [EC:1.1.3.6] D A3L23_02942 choA_2; Cholesterol oxidase K03333 choD; cholesterol oxidase [EC:1.1.3.6] D A3L23_02596 uctC_2; Acetyl-CoA:oxalate CoA-transferase K01796 AMACR; alpha-methylacyl-CoA racemase [EC:5.1.99.4] D A3L23_04449 paaJ_2; 3-oxoadipyl-CoA/3-oxo-5,6-dehydrosuberyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D A3L23_01127 hmp_2; 3-ketosteroid-9-alpha-hydroxylase reductase subunit K15983 kshB; 3-ketosteroid 9alpha-monooxygenase subunit B [EC:1.14.15.30] D A3L23_04441 putative enoyl-CoA hydratase 1 K28224 scdD; enoyl-CoA hydratase [EC:4.2.1.-] C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:rfa03020] D A3L23_02932 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D A3L23_02933 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D A3L23_00223 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D A3L23_04369 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors D A3L23_00733 hypothetical protein K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:rfa03010] D A3L23_03207 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D A3L23_03292 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D A3L23_03561 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D A3L23_04085 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D A3L23_03208 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D A3L23_03293 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D A3L23_03562 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D A3L23_04086 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D A3L23_03209 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D A3L23_03294 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D A3L23_03563 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D A3L23_04087 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D A3L23_04050 rpsA_1; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D A3L23_04663 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D A3L23_00252 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D A3L23_00224 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D A3L23_00235 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D A3L23_01734 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D A3L23_02990 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D A3L23_00238 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D A3L23_00208 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D A3L23_00259 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D A3L23_00225 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D A3L23_02989 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D A3L23_00226 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D A3L23_00241 rpsZ; 30S ribosomal protein S14 type Z K02954 RP-S14; small subunit ribosomal protein S14 D A3L23_00594 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D A3L23_04598 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D A3L23_04682 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D A3L23_00249 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D A3L23_00595 rpsR1_1; 30S ribosomal protein S18 1 K02963 RP-S18; small subunit ribosomal protein S18 D A3L23_01732 rpsR1_2; 30S ribosomal protein S18 1 K02963 RP-S18; small subunit ribosomal protein S18 D A3L23_00254 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D A3L23_03768 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D A3L23_02901 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D A3L23_00255 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D A3L23_00258 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D A3L23_00257 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D A3L23_00242 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D A3L23_00237 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D A3L23_01731 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D A3L23_02913 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D A3L23_02900 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D A3L23_02914 rplL_1; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D A3L23_00209 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D A3L23_00244 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D A3L23_00233 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D A3L23_00251 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D A3L23_00222 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D A3L23_00236 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D A3L23_04675 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D A3L23_04066 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D A3L23_03734 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D A3L23_00253 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D A3L23_00256 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D A3L23_00243 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D A3L23_00525 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D A3L23_03735 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D A3L23_00592 rpmB_1; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D A3L23_04707 rpmB_2; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D A3L23_00250 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D A3L23_00234 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D A3L23_00590 rpmE2; 50S ribosomal protein L31 type B K02909 RP-L31; large subunit ribosomal protein L31 D A3L23_03272 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D A3L23_00589 rpmF_1; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D A3L23_04698 rpmF_2; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D A3L23_00593 rpmG2_1; 50S ribosomal protein L33 2 K02913 RP-L33; large subunit ribosomal protein L33 D A3L23_02894 rpmG2_2; 50S ribosomal protein L33 2 K02913 RP-L33; large subunit ribosomal protein L33 D A3L23_04065 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D A3L23_00227 rpmJ_1; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D A3L23_04784 rpmJ_2; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 C 00970 Aminoacyl-tRNA biosynthesis [PATH:rfa00970] D A3L23_00563 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D A3L23_01831 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D A3L23_04797 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D A3L23_00645 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D A3L23_02100 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D A3L23_03263 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D A3L23_03680 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D A3L23_03814 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D A3L23_00753 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D A3L23_04429 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D A3L23_00510 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D A3L23_04725 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D A3L23_00754 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D A3L23_04724 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D A3L23_01355 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D A3L23_03705 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D A3L23_04428 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D A3L23_03666 tRNA-His K14226 tRNA-His; tRNA His D A3L23_01830 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D A3L23_00493 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D A3L23_01849 tRNA-Ser K14228 tRNA-Leu; tRNA Leu D A3L23_03588 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D A3L23_04037 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D A3L23_04295 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D A3L23_00757 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D A3L23_03598 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D A3L23_01590 tRNA-Met K14230 tRNA-Met; tRNA Met D A3L23_02893 tRNA-Met K14230 tRNA-Met; tRNA Met D A3L23_03827 tRNA-Met K14230 tRNA-Met; tRNA Met D A3L23_04826 tRNA-Met K14230 tRNA-Met; tRNA Met D A3L23_00752 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D A3L23_02380 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D A3L23_03706 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D A3L23_04105 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D A3L23_02070 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D A3L23_02099 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D A3L23_02276 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D A3L23_02322 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D A3L23_01049 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D A3L23_02421 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D A3L23_02892 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D A3L23_02897 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D A3L23_02891 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D A3L23_03840 tRNA-Val K14237 tRNA-Val; tRNA Val D A3L23_04427 tRNA-Val K14237 tRNA-Val; tRNA Val D A3L23_04430 tRNA-Val K14237 tRNA-Val; tRNA Val D A3L23_02300 gluQ; Glutamyl-Q tRNA(Asp) synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D A3L23_04728 gltX; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D A3L23_03450 gatA_3; Glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D A3L23_04747 gatA_4; Glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D A3L23_04740 gatB; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D A3L23_04748 gatC; Glutamyl-tRNA(Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D A3L23_04390 alaS; Alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D A3L23_04397 aspS; Aspartate--tRNA(Asp/Asn) ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D A3L23_03804 glyQS; Glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D A3L23_04425 thrS; Threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D A3L23_02003 serS; Serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D A3L23_02537 cysS; Cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D A3L23_00540 metG; Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D A3L23_04364 fmt; Methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D A3L23_03729 valS; Valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D A3L23_01791 leuS; Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D A3L23_03961 ileS; Isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D A3L23_01863 lysX; Lysylphosphatidylglycerol biosynthesis bifunctional protein LysX K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D A3L23_02519 lysS1; Lysine--tRNA ligase 1 K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D A3L23_03266 argS; Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D A3L23_04623 proS_2; Proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D A3L23_04402 hisS; Histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D A3L23_04068 pheS; Phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D A3L23_04069 pheT; Phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D A3L23_04084 tyrS; Tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D A3L23_00140 trpS; Tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes [PATH:rfa03008] D A3L23_04697 rnc; Ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3] D A3L23_03667 orn; Oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:rfa03060] D A3L23_00232 secY; Protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D A3L23_02898 secE; Protein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D A3L23_04348 secG; putative protein-export membrane protein SecG K03075 secG; preprotein translocase subunit SecG D A3L23_04410 hypothetical protein K03072 secD; preprotein translocase subunit SecD D A3L23_04409 hypothetical protein K03074 secF; preprotein translocase subunit SecF D A3L23_04411 hypothetical protein K03210 yajC; preprotein translocase subunit YajC D A3L23_00142 yidC_1; Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D A3L23_01816 yidC_2; Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D A3L23_00031 secA_1; Protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D A3L23_03989 secA_2; Protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D A3L23_04685 ffh; Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D A3L23_04690 ftsY; Signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor D A3L23_03921 hypothetical protein K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D A3L23_01220 tatA_1; Sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA D A3L23_04254 tatA_2; Sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA D A3L23_01222 tatB_1; Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB D A3L23_03115 tatB_2; Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB D A3L23_01221 tatC_1; Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC D A3L23_04253 tatC_2; Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC D A3L23_01191 lepB_1; Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D A3L23_04674 lepB_2; Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D A3L23_03967 lspA_1; Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] D A3L23_05115 lspA_2; Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] D A3L23_05130 lspA_3; Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] D A3L23_02590 sipW; Signal peptidase I W K13280 SEC11; signal peptidase I [EC:3.4.21.89] D A3L23_02592 hypothetical protein K13280 SEC11; signal peptidase I [EC:3.4.21.89] C 04141 Protein processing in endoplasmic reticulum [PATH:rfa04141] D A3L23_00665 htpG; Chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG D A3L23_01336 18 kDa heat shock protein K13993 HSP20; HSP20 family protein D A3L23_01909 18 kDa heat shock protein K13993 HSP20; HSP20 family protein C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:rfa04122] D A3L23_04755 iscS; IscS-like cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D A3L23_00073 sseA; Putative thiosulfate sulfurtransferase SseA K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D A3L23_00771 Putative thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D A3L23_02460 sseB; Putative thiosulfate sulfurtransferase SseB K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D A3L23_04754 mnmA; tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D A3L23_04793 moaE2_2; Molybdopterin synthase catalytic subunit 2 K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D A3L23_04790 moaA2; Cyclic pyranopterin monophosphate synthase 2 K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D A3L23_04789 hypothetical protein K03636 moaD; sulfur-carrier protein D A3L23_00003 moeZ_1; putative adenylyltransferase/sulfurtransferase MoeZ K21147 moeZR; sulfur-carrier protein adenylyltransferase/sulfurtransferase [EC:2.7.7.80 2.7.7.- 2.8.1.11 2.8.1.-] D A3L23_04855 moeZ_2; putative adenylyltransferase/sulfurtransferase MoeZ K21147 moeZR; sulfur-carrier protein adenylyltransferase/sulfurtransferase [EC:2.7.7.80 2.7.7.- 2.8.1.11 2.8.1.-] D A3L23_04792 moaC2; Cyclic pyranopterin monophosphate synthase accessory protein 2 K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D A3L23_02654 hypothetical protein K03154 thiS; sulfur carrier protein C 03050 Proteasome [PATH:rfa03050] D A3L23_04263 arc; Proteasome-associated ATPase K13527 mpa; proteasome-associated ATPase D A3L23_04259 prcA2; Proteasome subunit alpha 2 K03432 psmA; proteasome alpha subunit [EC:3.4.25.1] D A3L23_04260 prcB1; Proteasome subunit beta 1 K03433 psmB; proteasome beta subunit [EC:3.4.25.1] C 03018 RNA degradation [PATH:rfa03018] D A3L23_03733 rng; Ribonuclease G K08300 rne; ribonuclease E [EC:3.1.26.12] D A3L23_00498 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D A3L23_04597 pnp; Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D A3L23_03168 deaD_2; ATP-dependent RNA helicase DeaD K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D A3L23_03741 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D A3L23_03271 hypothetical protein K03628 rho; transcription termination factor Rho D A3L23_01467 rnj_1; Ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-] D A3L23_04547 rnj_2; Ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-] D A3L23_01070 dnaK_1; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D A3L23_00192 groL2; 60 kDa chaperonin 2 K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D A3L23_02103 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D A3L23_02696 groL1; 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D A3L23_04717 ppk; Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D A3L23_02718 hypothetical protein K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D A3L23_01801 cca; CCA-adding enzyme K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] B B 09124 Replication and repair C 03030 DNA replication [PATH:rfa03030] D A3L23_03496 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D A3L23_03912 polC; DNA polymerase III PolC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D A3L23_03970 dnaE1; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D A3L23_02331 dnaX_1; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D A3L23_02420 dnaX_2; DNA polymerase III subunit gamma/tau K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D A3L23_03767 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D A3L23_01820 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D A3L23_01729 dnaB_2; Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D A3L23_03812 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D A3L23_01733 ssb_1; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D A3L23_03686 ssb_2; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D A3L23_01569 rnhA; Ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D A3L23_03864 pspA_5; Phosphoserine phosphatase 1 K22316 rhnA-cobC; ribonuclease H / adenosylcobalamin/alpha-ribazole phosphatase [EC:3.1.26.4 3.1.3.73] D A3L23_04673 rnhB; Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D A3L23_04044 polA_1; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D A3L23_04750 ligA; DNA ligase A K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:rfa03410] D A3L23_02394 nth; Endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D A3L23_04709 ung; Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D A3L23_02527 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D A3L23_04083 Putative 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] D A3L23_00635 fpg2; putative formamidopyrimidine-DNA glycosylase-like protein K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D A3L23_04140 mutM; Formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D A3L23_04696 fpg1; Formamidopyrimidine-DNA glycosylase 1 K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D A3L23_00103 nei1_1; Endonuclease 8 1 K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18] D A3L23_00923 nei1_2; Endonuclease 8 1 K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18] D A3L23_03703 nei1_3; Endonuclease 8 1 K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18] D A3L23_03029 alkA_2; putative bifunctional transcriptional activator/DNA repair enzyme AlkA K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D A3L23_03106 tag; DNA-3-methyladenine glycosylase 1 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D A3L23_03073 hypothetical protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D A3L23_00141 exoA; Exodeoxyribonuclease K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2] D A3L23_02663 xthA; Exodeoxyribonuclease III K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2] D A3L23_01584 end; putative endonuclease 4 K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D A3L23_04044 polA_1; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D A3L23_04750 ligA; DNA ligase A K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:rfa03420] D A3L23_00507 mfd; Transcription-repair-coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D A3L23_00465 uvrA_1; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A D A3L23_04062 uvrA_3; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A D A3L23_04054 uvrB; UvrABC system protein B K03702 uvrB; excinuclease ABC subunit B D A3L23_04355 uvrC; UvrABC system protein C K03703 uvrC; excinuclease ABC subunit C D A3L23_00615 uvrD1; ATP-dependent DNA helicase UvrD1 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D A3L23_04836 uvrD2; ATP-dependent DNA helicase UvrD2 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D A3L23_04841 pcrA_1; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D A3L23_04044 polA_1; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D A3L23_04750 ligA; DNA ligase A K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D A3L23_00733 hypothetical protein K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] C 03430 Mismatch repair [PATH:rfa03430] D A3L23_00615 uvrD1; ATP-dependent DNA helicase UvrD1 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D A3L23_04836 uvrD2; ATP-dependent DNA helicase UvrD2 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D A3L23_04841 pcrA_1; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D A3L23_03020 xseA; Exodeoxyribonuclease 7 large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D A3L23_03019 xseB; Exodeoxyribonuclease 7 small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D A3L23_01733 ssb_1; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D A3L23_03686 ssb_2; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D A3L23_03970 dnaE1; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D A3L23_01820 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D A3L23_02331 dnaX_1; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D A3L23_03767 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D A3L23_02420 dnaX_2; DNA polymerase III subunit gamma/tau K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D A3L23_03496 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D A3L23_03912 polC; DNA polymerase III PolC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D A3L23_04750 ligA; DNA ligase A K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03440 Homologous recombination [PATH:rfa03440] D A3L23_01733 ssb_1; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D A3L23_03686 ssb_2; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D A3L23_01822 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF D A3L23_03798 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D A3L23_02353 recR; Recombination protein RecR K06187 recR; recombination protein RecR D A3L23_04532 recA; Protein RecA K03553 recA; recombination protein RecA D A3L23_04044 polA_1; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D A3L23_04413 ruvA; Holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D A3L23_04412 ruvB; Holliday junction ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D A3L23_04414 ruvC; Crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D A3L23_04704 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D A3L23_03543 recB; RecBCD enzyme subunit RecB K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D A3L23_03542 recC; RecBCD enzyme subunit RecC K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] D A3L23_03544 recD_3; RecBCD enzyme subunit RecD K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D A3L23_03970 dnaE1; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D A3L23_01820 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D A3L23_02331 dnaX_1; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D A3L23_03767 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D A3L23_02420 dnaX_2; DNA polymerase III subunit gamma/tau K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D A3L23_03496 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D A3L23_03912 polC; DNA polymerase III PolC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D A3L23_04366 priA_2; putative primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining [PATH:rfa03450] D A3L23_04327 hypothetical protein K10979 ku; DNA end-binding protein Ku D A3L23_01552 hypothetical protein K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] D A3L23_05167 hypothetical protein K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 [PATH:rfa03250] D A3L23_01836 ppiA; Peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus and Alphavirus C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus C 03273 Virion - Lassa virus and SFTS virus C 03272 Virion - Hepatitis viruses C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:rfa02010] D A3L23_03778 sbpA; Sulfate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D A3L23_03779 cysT; Sulfate transport system permease protein CysT K02046 cysU; sulfate/thiosulfate transport system permease protein D A3L23_03780 cysW_2; Sulfate transport system permease protein CysW K02047 cysW; sulfate/thiosulfate transport system permease protein D A3L23_03781 cysA_2; Sulfate/thiosulfate import ATP-binding protein CysA K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D A3L23_03376 ssuA; Putative aliphatic sulfonates-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D A3L23_03374 ssuC_4; Putative aliphatic sulfonates transport permease protein SsuC K15554 ssuC; sulfonate transport system permease protein D A3L23_03375 ssuB_1; Aliphatic sulfonates import ATP-binding protein SsuB K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D A3L23_04608 modA; Molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein D A3L23_04609 modB; Molybdenum transport system permease protein ModB K02018 modB; molybdate transport system permease protein D A3L23_04610 modC; Molybdenum import ATP-binding protein ModC K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D A3L23_00814 fbpA_1; Fe(3+)-binding periplasmic protein K02012 afuA; iron(III) transport system substrate-binding protein D A3L23_05127 fbpA_7; Fe(3+)-binding periplasmic protein K02012 afuA; iron(III) transport system substrate-binding protein D A3L23_00813 cysW_1; Sulfate transport system permease protein CysW K02011 afuB; iron(III) transport system permease protein D A3L23_05126 cysW_3; Sulfate transport system permease protein CysW K02011 afuB; iron(III) transport system permease protein D A3L23_00812 fbpC_1; Fe(3+) ions import ATP-binding protein FbpC K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D A3L23_05125 fbpC2; Fe(3+) ions import ATP-binding protein FbpC 2 K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D A3L23_03140 opuCC; Glycine betaine/carnitine/choline-binding protein OpuCC K05845 opuC; osmoprotectant transport system substrate-binding protein D A3L23_03141 hypothetical protein K05845 opuC; osmoprotectant transport system substrate-binding protein D A3L23_03878 osmX; Osmoprotectant-binding protein OsmX K05845 opuC; osmoprotectant transport system substrate-binding protein D A3L23_03137 opuBB_1; Choline transport system permease protein OpuBB K05846 opuBD; osmoprotectant transport system permease protein D A3L23_03138 opuCB_1; Glycine betaine/carnitine/choline transport system permease protein OpuCB K05846 opuBD; osmoprotectant transport system permease protein D A3L23_03879 opuCB_2; Glycine betaine/carnitine/choline transport system permease protein OpuCB K05846 opuBD; osmoprotectant transport system permease protein D A3L23_03881 opuBB_2; Choline transport system permease protein OpuBB K05846 opuBD; osmoprotectant transport system permease protein D A3L23_03139 opuBA; Choline transport ATP-binding protein OpuBA K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D A3L23_03880 osmV; Osmoprotectant import ATP-binding protein OsmV K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D A3L23_01439 sugC_1; Trehalose import ATP-binding protein SugC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D A3L23_01448 ugpC; sn-glycerol-3-phosphate import ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D A3L23_02364 sugC_3; Trehalose import ATP-binding protein SugC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D A3L23_03127 sugC_4; Trehalose import ATP-binding protein SugC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D A3L23_01442 putative ABC transporter-binding protein K10227 smoE; polyol transport system substrate-binding protein D A3L23_01441 ugpA_1; sn-glycerol-3-phosphate transport system permease protein UgpA K10228 smoF; polyol transport system permease protein D A3L23_01440 sugB_1; Trehalose transport system permease protein SugB K10229 smoG; polyol transport system permease protein D A3L23_01765 putative ABC transporter-binding protein K10236 thuE; trehalose/maltose transport system substrate-binding protein D A3L23_03124 lpqY; Trehalose-binding lipoprotein LpqY K10236 thuE; trehalose/maltose transport system substrate-binding protein D A3L23_01764 sugA_2; Trehalose transport system permease protein SugA K10237 thuF; trehalose/maltose transport system permease protein D A3L23_03125 sugA_3; Trehalose transport system permease protein SugA K10237 thuF; trehalose/maltose transport system permease protein D A3L23_01763 sugB_2; Trehalose transport system permease protein SugB K10238 thuG; trehalose/maltose transport system permease protein D A3L23_03126 sugB_3; Trehalose transport system permease protein SugB K10238 thuG; trehalose/maltose transport system permease protein D A3L23_00856 chvE; Multiple sugar-binding periplasmic receptor ChvE K10546 chvE; putative multiple sugar transport system substrate-binding protein D A3L23_00858 xylH; Xylose transport system permease protein XylH K10547 gguB; putative multiple sugar transport system permease protein D A3L23_00857 xylG; Xylose import ATP-binding protein XylG K10548 gguA; putative multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D A3L23_02203 hypothetical protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D A3L23_02918 hypothetical protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D A3L23_02919 hypothetical protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D A3L23_02920 hypothetical protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D A3L23_02921 hypothetical protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D A3L23_02922 hypothetical protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D A3L23_02923 hypothetical protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D A3L23_02916 mlaE_1; putative phospholipid ABC transporter permease protein MlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D A3L23_02917 mlaE_2; putative phospholipid ABC transporter permease protein MlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D A3L23_02915 mkl; putative ribonucleotide transport ATP-binding protein mkl K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D A3L23_02778 tmpC; Membrane lipoprotein TmpC K07335 bmpA; basic membrane protein A and related proteins D A3L23_02780 hypothetical protein K23535 nupB; general nucleoside transport system permease protein D A3L23_02781 hypothetical protein K23536 nupC; general nucleoside transport system permease protein D A3L23_02779 rbsA_4; Ribose import ATP-binding protein RbsA K23537 nupA; general nucleoside transport system ATP-binding protein D A3L23_01002 hypothetical protein K10439 rbsB; ribose transport system substrate-binding protein D A3L23_03383 ytfQ_2; ABC transporter periplasmic-binding protein YtfQ K10439 rbsB; ribose transport system substrate-binding protein D A3L23_03509 rbsB_2; D-ribose-binding periplasmic protein K10439 rbsB; ribose transport system substrate-binding protein D A3L23_01003 lsrD; Autoinducer 2 import system permease protein LsrD K10440 rbsC; ribose transport system permease protein D A3L23_03382 rbsC_3; Ribose transport system permease protein RbsC K10440 rbsC; ribose transport system permease protein D A3L23_03384 rbsA_5; Ribose import ATP-binding protein RbsA K10440 rbsC; ribose transport system permease protein D A3L23_03508 alsC; D-allose transport system permease protein AlsC K10440 rbsC; ribose transport system permease protein D A3L23_01004 rbsA_3; Ribose import ATP-binding protein RbsA K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D A3L23_00419 ytfQ_1; ABC transporter periplasmic-binding protein YtfQ K23508 ytfQ; galactofuranose transport system substrate-binding protein D A3L23_00421 ytfT; Inner membrane ABC transporter permease protein YtfT K23509 ytfT; galactofuranose transport system permease protein D A3L23_00422 yjfF; Inner membrane ABC transporter permease protein YjfF K23509 ytfT; galactofuranose transport system permease protein D A3L23_00420 rbsA_1; Ribose import ATP-binding protein RbsA K10820 ytfR; galactofuranose transport system ATP-binding protein [EC:7.5.2.9] D A3L23_00919 rbsB_1; D-ribose-binding periplasmic protein K10552 frcB; fructose transport system substrate-binding protein D A3L23_00918 rbsC_2; Ribose transport system permease protein RbsC K10553 frcC; fructose transport system permease protein D A3L23_00917 rbsA_2; Ribose import ATP-binding protein RbsA K10554 frcA; fructose transport system ATP-binding protein D A3L23_01510 ugpB_2; sn-glycerol-3-phosphate-binding periplasmic protein UgpB K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein D A3L23_01512 ugpA_2; sn-glycerol-3-phosphate transport system permease protein UgpA K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein D A3L23_01511 araQ; L-arabinose transport system permease protein AraQ K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein D A3L23_01509 sugC_2; Trehalose import ATP-binding protein SugC K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10] D A3L23_00765 pstS3; Phosphate-binding protein PstS 3 K02040 pstS; phosphate transport system substrate-binding protein D A3L23_00764 pstC2; Phosphate transport system permease protein PstC 2 K02037 pstC; phosphate transport system permease protein D A3L23_00763 pstA; Phosphate transport system permease protein PstA K02038 pstA; phosphate transport system permease protein D A3L23_00762 pstB1; Phosphate import ATP-binding protein PstB 1 K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D A3L23_03609 phnD; Phosphate-import protein PhnD K02044 phnD; phosphonate transport system substrate-binding protein D A3L23_03611 phnE; Phosphate-import permease protein PhnE K02042 phnE; phosphonate transport system permease protein D A3L23_03610 phnC; Phosphate-import ATP-binding protein PhnC K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2] D A3L23_03117 glnP; Glutamine transport system permease protein GlnP K10036 glnH; glutamine transport system substrate-binding protein D A3L23_03116 artM; Arginine transport ATP-binding protein ArtM K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1] D A3L23_04528 glnH_2; ABC transporter glutamine-binding protein GlnH K10005 gluB; glutamate transport system substrate-binding protein D A3L23_04529 glnM; putative glutamine ABC transporter permease protein GlnM K10006 gluC; glutamate transport system permease protein D A3L23_04530 artQ_2; Arginine transport system permease protein ArtQ K10007 gluD; glutamate transport system permease protein D A3L23_04527 glnQ_3; Glutamine transport ATP-binding protein GlnQ K10008 gluA; glutamate transport system ATP-binding protein [EC:7.4.2.1] D A3L23_03173 tcyB; L-cystine transport system permease protein TcyB K02424 tcyA; L-cystine transport system substrate-binding protein D A3L23_03172 tcyC_2; L-cystine import ATP-binding protein TcyC K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1] D A3L23_01383 hypothetical protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D A3L23_04039 hypothetical protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D A3L23_01381 livH_1; High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein D A3L23_04043 livH_4; High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein D A3L23_01382 livH_2; High-affinity branched-chain amino acid transport system permease protein LivH K01998 livM; branched-chain amino acid transport system permease protein D A3L23_04042 hypothetical protein K01998 livM; branched-chain amino acid transport system permease protein D A3L23_01379 lptB_1; Lipopolysaccharide export system ATP-binding protein LptB K01995 livG; branched-chain amino acid transport system ATP-binding protein D A3L23_04041 lptB_3; Lipopolysaccharide export system ATP-binding protein LptB K01995 livG; branched-chain amino acid transport system ATP-binding protein D A3L23_01380 livF_1; High-affinity branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein D A3L23_04040 livF_3; High-affinity branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein D A3L23_03849 metQ; Methionine-binding lipoprotein MetQ K02073 metQ; D-methionine transport system substrate-binding protein D A3L23_01397 amiC_1; Aliphatic amidase expression-regulating protein K11959 urtA; urea transport system substrate-binding protein D A3L23_02734 amiC_2; Aliphatic amidase expression-regulating protein K11959 urtA; urea transport system substrate-binding protein D A3L23_02733 livH_3; High-affinity branched-chain amino acid transport system permease protein LivH K11960 urtB; urea transport system permease protein D A3L23_02732 hypothetical protein K11961 urtC; urea transport system permease protein D A3L23_02731 lptB_2; Lipopolysaccharide export system ATP-binding protein LptB K11962 urtD; urea transport system ATP-binding protein D A3L23_02730 livF_2; High-affinity branched-chain amino acid transport ATP-binding protein LivF K11963 urtE; urea transport system ATP-binding protein D A3L23_02402 oppA; Oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein D A3L23_02403 dppB_2; Dipeptide transport system permease protein DppB K15581 oppB; oligopeptide transport system permease protein D A3L23_02404 oppC; Oligopeptide transport system permease protein OppC K15582 oppC; oligopeptide transport system permease protein D A3L23_02405 gsiA_3; Glutathione import ATP-binding protein GsiA K10823 oppF; oligopeptide transport system ATP-binding protein D A3L23_03343 lpqW; putative monoacyl phosphatidylinositol tetramannoside-binding protein LpqW K13889 gsiB; glutathione transport system substrate-binding protein D A3L23_03340 Putative peptide transport permease protein K13890 gsiC; glutathione transport system permease protein D A3L23_03341 Putative peptide transport permease protein K13891 gsiD; glutathione transport system permease protein D A3L23_03342 putative ABC transporter ATP-binding protein K13892 gsiA; glutathione transport system ATP-binding protein D A3L23_00829 hypothetical protein K25287 desE; iron-desferrioxamine transport system substrate-binding protein D A3L23_00742 yfiY_1; putative siderophore-binding lipoprotein YfiY K25286 fagD; iron-siderophore transport system substrate-binding protein D A3L23_00824 yhfQ_2; Putative ABC transporter substrate-binding lipoprotein YhfQ K25286 fagD; iron-siderophore transport system substrate-binding protein D A3L23_01218 yfmC_1; Fe(3+)-citrate-binding protein YfmC K25286 fagD; iron-siderophore transport system substrate-binding protein D A3L23_01274 yfiY_2; putative siderophore-binding lipoprotein YfiY K25286 fagD; iron-siderophore transport system substrate-binding protein D A3L23_01554 yfmC_2; Fe(3+)-citrate-binding protein YfmC K25286 fagD; iron-siderophore transport system substrate-binding protein D A3L23_02463 yfmC_3; Fe(3+)-citrate-binding protein YfmC K25286 fagD; iron-siderophore transport system substrate-binding protein D A3L23_02728 yfiY_5; putative siderophore-binding lipoprotein YfiY K25286 fagD; iron-siderophore transport system substrate-binding protein D A3L23_03189 yfiY_7; putative siderophore-binding lipoprotein YfiY K25286 fagD; iron-siderophore transport system substrate-binding protein D A3L23_03801 yfmC_5; Fe(3+)-citrate-binding protein YfmC K25286 fagD; iron-siderophore transport system substrate-binding protein D A3L23_04464 yfmC_6; Fe(3+)-citrate-binding protein YfmC K25286 fagD; iron-siderophore transport system substrate-binding protein D A3L23_00819 fepD; Ferric enterobactin transport system permease protein FepD K23186 fepD; iron-siderophore transport system permease protein D A3L23_04196 yfiZ; putative siderophore transport system permease protein YfiZ K23186 fepD; iron-siderophore transport system permease protein D A3L23_00818 fepG; Ferric enterobactin transport system permease protein FepG K23187 fepG; iron-siderophore transport system permease protein D A3L23_04195 feuC; Iron-uptake system permease protein FeuC K23187 fepG; iron-siderophore transport system permease protein D A3L23_00817 yusV_1; putative siderophore transport system ATP-binding protein YusV K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-] D A3L23_04194 yusV_2; putative siderophore transport system ATP-binding protein YusV K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-] D A3L23_04600 putative periplasmic iron-binding protein K11601 mntC; manganese transport system substrate-binding protein D A3L23_04602 mntB_2; Manganese transport system membrane protein MntB K11602 mntB; manganese transport system permease protein D A3L23_04601 fhuC_4; Iron(3+)-hydroxamate import ATP-binding protein FhuC K11603 mntA; manganese transport system ATP-binding protein [EC:7.2.2.5] D A3L23_02958 bioY; Biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component D A3L23_02962 bioN; Energy-coupling factor transporter transmembrane protein BioN K16783 bioN; biotin transport system permease protein D A3L23_02961 bioM; Biotin transport ATP-binding protein BioM K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-] D A3L23_00650 ecfT; Energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein D A3L23_02064 hypothetical protein K09690 wzm; homopolymeric O-antigen transport system permease protein D A3L23_02063 tagH; Teichoic acids export ATP-binding protein TagH K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14] D A3L23_04811 ftsX; Cell division protein FtsX K09811 ftsX; cell division transport system permease protein D A3L23_04812 ftsE; Cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D A3L23_02286 putative ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D A3L23_02287 putative ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D A3L23_00775 putative ABC transporter ATP-binding protein K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC D A3L23_00776 cydD; ATP-binding/permease protein CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD C 02060 Phosphotransferase system (PTS) [PATH:rfa02060] D A3L23_04513 ptsI; Phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D A3L23_04517 ptsH; Phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr D A3L23_03243 crr; Glucose-specific phosphotransferase enzyme IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D A3L23_03245 ptsG; PTS system glucose-specific EIICB component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193] D A3L23_04516 fruA; PTS system fructose-specific EIIABC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D A3L23_02449 lacC; Tagatose-6-phosphate kinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] D A3L23_04515 pfkB; ATP-dependent 6-phosphofructokinase isozyme 2 K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] C 03070 Bacterial secretion system [PATH:rfa03070] D A3L23_04410 hypothetical protein K03072 secD; preprotein translocase subunit SecD D A3L23_04409 hypothetical protein K03074 secF; preprotein translocase subunit SecF D A3L23_02898 secE; Protein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D A3L23_04348 secG; putative protein-export membrane protein SecG K03075 secG; preprotein translocase subunit SecG D A3L23_00232 secY; Protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D A3L23_04411 hypothetical protein K03210 yajC; preprotein translocase subunit YajC D A3L23_00142 yidC_1; Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D A3L23_01816 yidC_2; Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D A3L23_00031 secA_1; Protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D A3L23_03989 secA_2; Protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D A3L23_04690 ftsY; Signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor D A3L23_04685 ffh; Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D A3L23_01220 tatA_1; Sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA D A3L23_04254 tatA_2; Sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA D A3L23_01222 tatB_1; Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB D A3L23_03115 tatB_2; Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB D A3L23_01221 tatC_1; Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC D A3L23_04253 tatC_2; Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC B B 09132 Signal transduction C 02020 Two-component system [PATH:rfa02020] D A3L23_02210 phoD_1; Alkaline phosphatase D K01113 phoD; alkaline phosphatase D [EC:3.1.3.1] D A3L23_02940 phoD_2; Alkaline phosphatase D K01113 phoD; alkaline phosphatase D [EC:3.1.3.1] D A3L23_03192 pld; Phospholipase D K01113 phoD; alkaline phosphatase D [EC:3.1.3.1] D A3L23_02794 senX3; Signal-transduction histidine kinase senX3 K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3] D A3L23_02795 regX3_2; Sensory transduction protein regX3 K07776 regX3; two-component system, OmpR family, response regulator RegX3 D A3L23_00765 pstS3; Phosphate-binding protein PstS 3 K02040 pstS; phosphate transport system substrate-binding protein D A3L23_03114 hhoB_2; Putative serine protease HhoB K04771 degP; serine protease Do [EC:3.4.21.107] D A3L23_01661 kdpD; Sensor protein KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D A3L23_01660 kdpE_2; Transcriptional regulatory protein KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D A3L23_01664 kdpA; Potassium-transporting ATPase A chain K01546 kdpA; potassium-transporting ATPase potassium-binding subunit D A3L23_01663 kdpB; Potassium-transporting ATPase B chain K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6] D A3L23_01662 kdpC; Potassium-transporting ATPase C chain K01548 kdpC; potassium-transporting ATPase KdpC subunit D A3L23_00880 hypothetical protein K07793 tctA; putative tricarboxylic transport membrane protein D A3L23_01307 hypothetical protein K07793 tctA; putative tricarboxylic transport membrane protein D A3L23_00879 hypothetical protein K07794 tctB; putative tricarboxylic transport membrane protein D A3L23_00878 hypothetical protein K07795 tctC; putative tricarboxylic transport membrane protein D A3L23_04338 ctaA; Heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9] D A3L23_00162 mprB_1; Signal transduction histidine-protein kinase/phosphatase MprB K07653 mprB; two-component system, OmpR family, sensor histidine kinase MprB [EC:2.7.13.3] D A3L23_00577 mprB_2; Signal transduction histidine-protein kinase/phosphatase MprB K07653 mprB; two-component system, OmpR family, sensor histidine kinase MprB [EC:2.7.13.3] D A3L23_00578 mprA_1; Response regulator MprA K07669 mprA; two-component system, OmpR family, response regulator MprA D A3L23_00576 htrA; Putative serine protease HtrA K08372 pepD; putative serine protease PepD [EC:3.4.21.-] D A3L23_00035 mtrB; Sensor histidine kinase MtrB K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3] D A3L23_00036 mtrA; DNA-binding response regulator MtrA K07670 mtrA; two-component system, OmpR family, response regulator MtrA D A3L23_01818 dnaA; Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D A3L23_00689 prrB; Sensor-type histidine kinase PrrB K07655 prrB; two-component system, OmpR family, sensor histidine kinase PrrB [EC:2.7.13.3] D A3L23_00688 prrA; Transcriptional regulatory protein PrrA K07671 prrA; two-component system, OmpR family, response regulator PrrA D A3L23_04600 putative periplasmic iron-binding protein K11601 mntC; manganese transport system substrate-binding protein D A3L23_04601 fhuC_4; Iron(3+)-hydroxamate import ATP-binding protein FhuC K11603 mntA; manganese transport system ATP-binding protein [EC:7.2.2.5] D A3L23_04602 mntB_2; Manganese transport system membrane protein MntB K11602 mntB; manganese transport system permease protein D A3L23_04193 mprF; Phosphatidylglycerol lysyltransferase K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3] D A3L23_02156 citE; Citrate lyase subunit beta-like protein K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34] D A3L23_03122 mcl1_1; L-malyl-CoA/beta-methylmalyl-CoA lyase K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34] D A3L23_03458 mcl1_2; L-malyl-CoA/beta-methylmalyl-CoA lyase K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34] D A3L23_04657 Citrate lyase subunit beta-like protein K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34] D A3L23_03136 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D A3L23_01261 cimH; Citrate/malate transporter K11616 maeN; malate:Na+ symporter D A3L23_00714 desK_2; Sensor histidine kinase DesK K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3] D A3L23_03808 desK_5; Sensor histidine kinase DesK K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3] D A3L23_00715 desR_1; Transcriptional regulatory protein DesR K07693 desR; two-component system, NarL family, response regulator DesR D A3L23_03809 desR_3; Transcriptional regulatory protein DesR K07693 desR; two-component system, NarL family, response regulator DesR D A3L23_01145 devS; Redox sensor histidine kinase response regulator DevS K07682 devS; two-component system, NarL family, sensor histidine kinase DevS [EC:2.7.13.3] D A3L23_01146 devR; Transcriptional regulatory protein DevR (DosR) K07695 devR; two-component system, NarL family, response regulator DevR D A3L23_04887 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA D A3L23_02409 Putative conjugal transfer protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D A3L23_04884 Putative conjugal transfer protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D A3L23_02410 hypothetical protein K12510 tadB; tight adherence protein B D A3L23_04885 hypothetical protein K12510 tadB; tight adherence protein B D A3L23_02411 hypothetical protein K12511 tadC; tight adherence protein C D A3L23_04886 hypothetical protein K12511 tadC; tight adherence protein C D A3L23_04687 glnD; Bifunctional uridylyltransferase/uridylyl-removing enzyme K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59] D A3L23_04688 glnB; Nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1 D A3L23_00239 gms; Glutamate--methylamine ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D A3L23_00882 glnA_1; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D A3L23_03876 glnA_2; putative glutamine synthetase 2 K01915 glnA; glutamine synthetase [EC:6.3.1.2] D A3L23_03882 glnA_3; Glutamine synthetase 1 K01915 glnA; glutamine synthetase [EC:6.3.1.2] D A3L23_00494 atoE; Short-chain fatty acids transporter K02106 atoE; short-chain fatty acids transporter D A3L23_00314 fadA_1; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A3L23_01384 fadI; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A3L23_02150 hypothetical protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A3L23_02333 fadA_2; Putative acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A3L23_02960 putative acetyl-CoA acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A3L23_03568 putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A3L23_03716 pcaF; Beta-ketoadipyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A3L23_00398 dctA_1; Aerobic C4-dicarboxylate transport protein K11103 dctA; aerobic C4-dicarboxylate transport protein D A3L23_00806 dctA_2; Aerobic C4-dicarboxylate transport protein K11103 dctA; aerobic C4-dicarboxylate transport protein D A3L23_02392 crp; cAMP receptor protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D A3L23_00369 glsA1_1; Glutaminase 1 K01425 glsA; glutaminase [EC:3.5.1.2] D A3L23_04457 glsA1_2; Glutaminase 1 K01425 glsA; glutaminase [EC:3.5.1.2] D A3L23_00778 cydA; Cytochrome bd ubiquinol oxidase subunit 1 K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D A3L23_00777 cydB; Cytochrome bd-I ubiquinol oxidase subunit 2 K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D A3L23_01113 ptp; Low molecular weight protein-tyrosine-phosphatase Ptp K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48] D A3L23_03859 ptpA_2; putative low molecular weight protein-tyrosine-phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48] C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04082 Neuroactive ligand signaling C 04081 Hormone signaling C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecule (CAM) interaction C 04517 IgSF CAM signaling C 04518 Integrin signaling C 04519 Cadherin signaling # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagocytosis C 04142 Lysosome biogenesis D A3L23_01109 csxA; Exo-beta-D-glucosaminidase K01192 E3.2.1.25; beta-mannosidase [EC:3.2.1.25] C 04146 Peroxisome [PATH:rfa04146] D A3L23_02596 uctC_2; Acetyl-CoA:oxalate CoA-transferase K01796 AMACR; alpha-methylacyl-CoA racemase [EC:5.1.99.4] D A3L23_02825 acrC_1; Acryloyl-CoA reductase (NADH) K00232 ACOX1_3; acyl-CoA oxidase [EC:1.3.3.6] D A3L23_00410 lcfB_1; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D A3L23_02124 lcfB_3; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D A3L23_03167 Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D A3L23_03918 Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D A3L23_04838 nudC_3; NADH pyrophosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22] D A3L23_03351 icd; Isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D A3L23_00630 ccl; (R)-citramalyl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D A3L23_01259 yngG; Hydroxymethylglutaryl-CoA lyase YngG K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D A3L23_01296 katE; Catalase HPII K03781 katE; catalase [EC:1.11.1.6] D A3L23_02373 katA; Catalase K03781 katE; catalase [EC:1.11.1.6] D A3L23_02668 sodC; Cu-Zn superoxide dismutase K04565 SOD1; superoxide dismutase, Cu-Zn family [EC:1.15.1.1] D A3L23_01979 sodA; Mn superoxide dismutase K04564 SOD2; superoxide dismutase, Fe-Mn family [EC:1.15.1.1] C 04149 Peroxisome - yeast C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence C 04156 Integrated stress response (ISR) signaling pathway [PATH:rfa04156] D A3L23_00665 htpG; Chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG D A3L23_01590 tRNA-Met K14230 tRNA-Met; tRNA Met D A3L23_02893 tRNA-Met K14230 tRNA-Met; tRNA Met D A3L23_03827 tRNA-Met K14230 tRNA-Met; tRNA Met D A3L23_04826 tRNA-Met K14230 tRNA-Met; tRNA Met D A3L23_01070 dnaK_1; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D A3L23_00192 groL2; 60 kDa chaperonin 2 K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D A3L23_02103 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D A3L23_02696 groL1; 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7] B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:rfa02024] D A3L23_04019 trpE; Anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D A3L23_00740 aroG_1; Phospho-2-dehydro-3-deoxyheptonate aldolase, Phe-sensitive K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D A3L23_03927 aroG_2; Phospho-2-dehydro-3-deoxyheptonate aldolase AroG K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D A3L23_00644 phzD; putative isochorismatase K20261 phzD; trans-2,3-dihydro-3-hydroxyanthranilic acid synthase [EC:3.3.2.15] D A3L23_01660 kdpE_2; Transcriptional regulatory protein KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D A3L23_01795 gadA; Glutamate decarboxylase alpha K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D A3L23_02310 hypothetical protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D A3L23_02308 phnV; Putative 2-aminoethylphosphonate transport system permease protein PhnV K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D A3L23_02309 hypothetical protein K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D A3L23_02307 cysA_1; Sulfate/thiosulfate import ATP-binding protein CysA K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D A3L23_01383 hypothetical protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D A3L23_04039 hypothetical protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D A3L23_01381 livH_1; High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein D A3L23_04043 livH_4; High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein D A3L23_01382 livH_2; High-affinity branched-chain amino acid transport system permease protein LivH K01998 livM; branched-chain amino acid transport system permease protein D A3L23_04042 hypothetical protein K01998 livM; branched-chain amino acid transport system permease protein D A3L23_01379 lptB_1; Lipopolysaccharide export system ATP-binding protein LptB K01995 livG; branched-chain amino acid transport system ATP-binding protein D A3L23_04041 lptB_3; Lipopolysaccharide export system ATP-binding protein LptB K01995 livG; branched-chain amino acid transport system ATP-binding protein D A3L23_01380 livF_1; High-affinity branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein D A3L23_04040 livF_3; High-affinity branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein D A3L23_00410 lcfB_1; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D A3L23_02124 lcfB_3; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D A3L23_03167 Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D A3L23_03918 Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D A3L23_02392 crp; cAMP receptor protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D A3L23_04360 ribD_1; Riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D A3L23_02402 oppA; Oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein D A3L23_02403 dppB_2; Dipeptide transport system permease protein DppB K15581 oppB; oligopeptide transport system permease protein D A3L23_02404 oppC; Oligopeptide transport system permease protein OppC K15582 oppC; oligopeptide transport system permease protein D A3L23_02405 gsiA_3; Glutathione import ATP-binding protein GsiA K10823 oppF; oligopeptide transport system ATP-binding protein D A3L23_00787 ddpA; putative D,D-dipeptide-binding periplasmic protein DdpA K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D A3L23_01203 dppA_1; Periplasmic dipeptide transport protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D A3L23_01473 dppA_2; Periplasmic dipeptide transport protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D A3L23_01770 nikA_1; Nickel-binding periplasmic protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D A3L23_02619 nikA_2; Nickel-binding periplasmic protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D A3L23_04408 putative lipoprotein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D A3L23_00786 dppB_1; Dipeptide transport system permease protein DppB K02033 ABC.PE.P; peptide/nickel transport system permease protein D A3L23_01202 nikB_1; Nickel transport system permease protein NikB K02033 ABC.PE.P; peptide/nickel transport system permease protein D A3L23_01474 gsiC_1; Glutathione transport system permease protein GsiC K02033 ABC.PE.P; peptide/nickel transport system permease protein D A3L23_01769 nikB_2; Nickel transport system permease protein NikB K02033 ABC.PE.P; peptide/nickel transport system permease protein D A3L23_02620 gsiC_2; Glutathione transport system permease protein GsiC K02033 ABC.PE.P; peptide/nickel transport system permease protein D A3L23_00785 gsiD; Glutathione transport system permease protein GsiD K02034 ABC.PE.P1; peptide/nickel transport system permease protein D A3L23_01201 ddpC_1; putative D,D-dipeptide transport system permease protein DdpC K02034 ABC.PE.P1; peptide/nickel transport system permease protein D A3L23_01475 ddpC_2; putative D,D-dipeptide transport system permease protein DdpC K02034 ABC.PE.P1; peptide/nickel transport system permease protein D A3L23_02621 ddpC_3; putative D,D-dipeptide transport system permease protein DdpC K02034 ABC.PE.P1; peptide/nickel transport system permease protein D A3L23_00784 gsiA_1; Glutathione import ATP-binding protein GsiA K02031 ddpD; peptide/nickel transport system ATP-binding protein D A3L23_01200 oppD_1; Oligopeptide transport ATP-binding protein OppD K02031 ddpD; peptide/nickel transport system ATP-binding protein D A3L23_01476 oppD_2; Oligopeptide transport ATP-binding protein OppD K02031 ddpD; peptide/nickel transport system ATP-binding protein D A3L23_01772 ddpD; putative D,D-dipeptide transport ATP-binding protein DdpD K02031 ddpD; peptide/nickel transport system ATP-binding protein D A3L23_02622 gsiA_4; Glutathione import ATP-binding protein GsiA K02031 ddpD; peptide/nickel transport system ATP-binding protein D A3L23_01477 oppF_2; Oligopeptide transport ATP-binding protein OppF K02032 ddpF; peptide/nickel transport system ATP-binding protein D A3L23_00142 yidC_1; Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D A3L23_01816 yidC_2; Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D A3L23_02898 secE; Protein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D A3L23_04348 secG; putative protein-export membrane protein SecG K03075 secG; preprotein translocase subunit SecG D A3L23_00232 secY; Protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D A3L23_04411 hypothetical protein K03210 yajC; preprotein translocase subunit YajC D A3L23_00031 secA_1; Protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D A3L23_03989 secA_2; Protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D A3L23_04690 ftsY; Signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor D A3L23_04685 ffh; Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis D A3L23_01002 hypothetical protein K10439 rbsB; ribose transport system substrate-binding protein D A3L23_03383 ytfQ_2; ABC transporter periplasmic-binding protein YtfQ K10439 rbsB; ribose transport system substrate-binding protein D A3L23_03509 rbsB_2; D-ribose-binding periplasmic protein K10439 rbsB; ribose transport system substrate-binding protein C 02040 Flagellar assembly [PATH:rfa02040] D A3L23_03173 tcyB; L-cystine transport system permease protein TcyB K02424 tcyA; L-cystine transport system substrate-binding protein D A3L23_04479 sigA; RNA polymerase sigma factor SigA K03086 rpoD; RNA polymerase primary sigma factor C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D A3L23_00498 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagosome formation C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04981 Folate transport and metabolism [PATH:rfa04981] D A3L23_00568 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] D A3L23_00637 folA; Dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D A3L23_02144 glyA2; Serine hydroxymethyltransferase 2 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D A3L23_03011 glyA1; Serine hydroxymethyltransferase 1 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D A3L23_00636 thyA; Thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D A3L23_04271 metH; Methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] C 04980 Cobalamin transport and metabolism [PATH:rfa04980] D A3L23_03288 Cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D A3L23_04303 putative GTPase K07588 MMAA; GTPase [EC:3.6.5.-] D A3L23_04986 putative GTPase K07588 MMAA; GTPase [EC:3.6.5.-] D A3L23_04304 mutB; putative methylmalonyl-CoA mutase large subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D A3L23_04306 mutA_2; putative methylmalonyl-CoA mutase small subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D A3L23_04271 metH; Methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation C 04382 Cornified envelope formation D A3L23_00098 bioF_1; 8-amino-7-oxononanoate synthase K00654 SPT; serine palmitoyltransferase [EC:2.3.1.50] B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:rfa01501] D A3L23_01388 nagZ; Beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D A3L23_02402 oppA; Oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein D A3L23_02403 dppB_2; Dipeptide transport system permease protein DppB K15581 oppB; oligopeptide transport system permease protein D A3L23_02404 oppC; Oligopeptide transport system permease protein OppC K15582 oppC; oligopeptide transport system permease protein D A3L23_02405 gsiA_3; Glutathione import ATP-binding protein GsiA K10823 oppF; oligopeptide transport system ATP-binding protein D A3L23_04190 htpX_2; Protease HtpX K02172 blaR1; bla regulator protein blaR1 D A3L23_04191 blaI_1; Transcriptional regulator BlaI K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D A3L23_02154 blaF; Beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6] D A3L23_03945 pbpB; Penicillin-binding protein PbpB K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:rfa01502] D A3L23_00898 ddl_1; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D A3L23_04714 ddl_2; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D A3L23_00200 alr; Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D A3L23_03947 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D A3L23_01888 mraY_1; Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D A3L23_03948 mraY_2; Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D A3L23_03951 murG_2; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:rfa01503] D A3L23_01809 lytC_1; N-acetylmuramoyl-L-alanine amidase LytC K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D A3L23_04795 lytC_2; N-acetylmuramoyl-L-alanine amidase LytC K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D A3L23_03114 hhoB_2; Putative serine protease HhoB K04771 degP; serine protease Do [EC:3.4.21.107] D A3L23_01836 ppiA; Peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D A3L23_02052 lpxA; Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D A3L23_04193 mprF; Phosphatidylglycerol lysyltransferase K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:rfa01000] C 01001 Protein kinases [BR:rfa01001] D A3L23_02648 pknG; Serine/threonine-protein kinase PknG K14949 pknG; serine/threonine-protein kinase PknG [EC:2.7.11.1] D A3L23_00177 prkC; Serine/threonine-protein kinase PrkC K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D A3L23_01842 pknB; Serine/threonine-protein kinase PknB K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D A3L23_01843 pknA_1; Serine/threonine-protein kinase PknA K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D A3L23_02694 pknF; Serine/threonine-protein kinase PknF K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D A3L23_03928 pknL_1; Serine/threonine-protein kinase PknL K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D A3L23_04150 pknA_2; Serine/threonine-protein kinase PknA K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D A3L23_00396 rsbW_1; Serine-protein kinase RsbW K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] D A3L23_01116 rsbW_2; Serine-protein kinase RsbW K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] D A3L23_01232 ywqD_1; Tyrosine-protein kinase YwqD K25588 K25588; tyrosine-protein kinase [EC:2.7.10.3] D A3L23_01238 ywqD_2; Tyrosine-protein kinase YwqD K25588 K25588; tyrosine-protein kinase [EC:2.7.10.3] D A3L23_02794 senX3; Signal-transduction histidine kinase senX3 K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3] D A3L23_01661 kdpD; Sensor protein KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D A3L23_00162 mprB_1; Signal transduction histidine-protein kinase/phosphatase MprB K07653 mprB; two-component system, OmpR family, sensor histidine kinase MprB [EC:2.7.13.3] D A3L23_00577 mprB_2; Signal transduction histidine-protein kinase/phosphatase MprB K07653 mprB; two-component system, OmpR family, sensor histidine kinase MprB [EC:2.7.13.3] D A3L23_00035 mtrB; Sensor histidine kinase MtrB K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3] D A3L23_00689 prrB; Sensor-type histidine kinase PrrB K07655 prrB; two-component system, OmpR family, sensor histidine kinase PrrB [EC:2.7.13.3] D A3L23_00275 arlS_2; Signal transduction histidine-protein kinase ArlS K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D A3L23_00850 tcrY_1; putative sensor histidine kinase TcrY K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D A3L23_02007 tcrY_2; putative sensor histidine kinase TcrY K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D A3L23_00714 desK_2; Sensor histidine kinase DesK K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3] D A3L23_03808 desK_5; Sensor histidine kinase DesK K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3] D A3L23_01145 devS; Redox sensor histidine kinase response regulator DevS K07682 devS; two-component system, NarL family, sensor histidine kinase DevS [EC:2.7.13.3] D A3L23_00846 dcuS_2; Sensor histidine kinase DcuS K02476 K02476; two-component system, CitB family, sensor kinase [EC:2.7.13.3] D A3L23_00659 yehU; Sensor histidine kinase YehU K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3] D A3L23_00017 pdtaS; putative sensor histidine kinase pdtaS K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:rfa01009] D A3L23_00038 ahcY; Adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D A3L23_00665 htpG; Chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG D A3L23_01846 pstP; PP2C-family Ser/Thr phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] D A3L23_05039 Putative protein phosphatase 2C-type K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] D A3L23_04773 serB_2; Phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 01002 Peptidases and inhibitors [BR:rfa01002] D A3L23_03967 lspA_1; Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] D A3L23_05115 lspA_2; Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] D A3L23_05130 lspA_3; Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] D A3L23_00183 guaA_1; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D A3L23_01611 guaA_2; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D A3L23_00117 putative endopeptidase K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D A3L23_02965 ripA_1; Peptidoglycan endopeptidase RipA K21473 ripA; peptidoglycan DL-endopeptidase RipA [EC:3.4.-.-] D A3L23_04320 ripA_2; Peptidoglycan endopeptidase RipA K21473 ripA; peptidoglycan DL-endopeptidase RipA [EC:3.4.-.-] D A3L23_00788 purF; Amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D A3L23_01850 gltB_1; Glutamate synthase [NADPH] large chain K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D A3L23_04027 gltB_2; Glutamate synthase [NADPH] large chain K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D A3L23_00202 glmS; Glutamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D A3L23_03900 asnB; Putative asparagine synthetase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D A3L23_02753 yraA; Putative cysteine protease YraA K05520 yhbO; deglycase [EC:3.5.1.124] D A3L23_00094 hypothetical protein K07052 K07052; CAAX protease family protein D A3L23_00790 hypothetical protein K07052 K07052; CAAX protease family protein D A3L23_02012 hypothetical protein K07052 K07052; CAAX protease family protein D A3L23_02598 hypothetical protein K07052 K07052; CAAX protease family protein D A3L23_04683 hypothetical protein K07052 K07052; CAAX protease family protein D A3L23_02846 pepN_2; Aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D A3L23_03699 pepN_3; Aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D A3L23_01507 pepO; Neutral endopeptidase K07386 pepO; putative endopeptidase [EC:3.4.24.-] D A3L23_03890 pepA; putative cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D A3L23_03097 dapE_2; Putative succinyl-diaminopimelate desuccinylase DapE K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D A3L23_03595 dapE_3; Succinyl-diaminopimelate desuccinylase K23980 tpdA; cysteinylglycine-S-conjugate dipeptidase [EC:3.4.13.23] D A3L23_00230 map-1; Methionine aminopeptidase 1 K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D A3L23_02638 map_1; Methionine aminopeptidase 1 K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D A3L23_04645 map_2; Methionine aminopeptidase 2 K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D A3L23_02658 lap; Aminopeptidase K28939 lap; leucyl aminopeptidase [EC:3.4.11.1] D A3L23_02506 ftsH_1; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D A3L23_02889 hypothetical protein K03799 htpX; heat shock protein HtpX [EC:3.4.24.-] D A3L23_04190 htpX_2; Protease HtpX K02172 blaR1; bla regulator protein blaR1 D A3L23_03599 hypothetical protein K24131 prsW; protease PrsW [EC:3.4.-.-] D A3L23_03605 hypothetical protein K24131 prsW; protease PrsW [EC:3.4.-.-] D A3L23_03114 hhoB_2; Putative serine protease HhoB K04771 degP; serine protease Do [EC:3.4.21.107] D A3L23_00576 htrA; Putative serine protease HtrA K08372 pepD; putative serine protease PepD [EC:3.4.21.-] D A3L23_01082 sprD; Streptogrisin-D K18546 sprC; streptogrisin C [EC:3.4.21.-] D A3L23_00217 Thermophilic serine proteinase K14743 mycP; membrane-anchored mycosin MYCP [EC:3.4.21.-] D A3L23_02723 Prolyl endopeptidase K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26] D A3L23_00809 ptrB; Protease 2 K01354 ptrB; oligopeptidase B [EC:3.4.21.83] D A3L23_00138 dacF; D-alanyl-D-alanine carboxypeptidase DacF K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D A3L23_02502 dac; D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D A3L23_01174 clpP2_1; ATP-dependent Clp protease proteolytic subunit 2 K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D A3L23_01175 clpP; ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D A3L23_03708 clpP2_2; ATP-dependent Clp protease proteolytic subunit 2 K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D A3L23_03709 clpP2_3; ATP-dependent Clp protease proteolytic subunit 2 K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D A3L23_01556 lon_2; Lon protease K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D A3L23_04830 lon_3; Lon protease K07177 K07177; Lon-like protease D A3L23_04510 lexA; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88] D A3L23_01191 lepB_1; Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D A3L23_04674 lepB_2; Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D A3L23_02590 sipW; Signal peptidase I W K13280 SEC11; signal peptidase I [EC:3.4.21.89] D A3L23_02592 hypothetical protein K13280 SEC11; signal peptidase I [EC:3.4.21.89] D A3L23_03367 pip_1; Proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5] D A3L23_03871 pip_2; Proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5] D A3L23_01599 ytpA_1; Phospholipase YtpA K01054 MGLL; acylglycerol lipase [EC:3.1.1.23] D A3L23_03233 putative peptidase K05995 pepE; dipeptidase E [EC:3.4.13.21] D A3L23_04259 prcA2; Proteasome subunit alpha 2 K03432 psmA; proteasome alpha subunit [EC:3.4.25.1] D A3L23_04260 prcB1; Proteasome subunit beta 1 K03433 psmB; proteasome beta subunit [EC:3.4.25.1] D A3L23_01659 ggt; Gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D A3L23_00931 ywrD; Putative gamma-glutamyltransferase YwrD K22602 hpxW; oxamate amidohydrolase [EC:3.5.1.126] D A3L23_04236 tldD; Metalloprotease TldD K03568 tldD; TldD protein C 01003 Glycosyltransferases [BR:rfa01003] D A3L23_01108 mftF_5; Putative mycofactocin biosynthesis glycosyltransferase MftF K22844 aglG; glucosyl-dolichyl phosphate glucuronosyltransferase [EC:2.4.1.356] D A3L23_04592 Undecaprenyl-phosphate mannosyltransferase K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83] D A3L23_00545 pmt; putative dolichyl-phosphate-mannose--protein mannosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109] D A3L23_04421 pimA_4; GDP-mannose-dependent alpha-(1-2)-phosphatidylinositol mannosyltransferase K08256 pimA; phosphatidyl-myo-inositol alpha-mannosyltransferase [EC:2.4.1.345] D A3L23_03917 pimB_2; GDP-mannose-dependent alpha-(1-6)-phosphatidylinositol monomannoside mannosyltransferase K13668 pimB; phosphatidyl-myo-inositol dimannoside synthase [EC:2.4.1.346] D A3L23_05001 pimB_3; GDP-mannose-dependent alpha-(1-6)-phosphatidylinositol monomannoside mannosyltransferase K13668 pimB; phosphatidyl-myo-inositol dimannoside synthase [EC:2.4.1.346] D A3L23_01412 pimC; GDP-mannose-dependent alpha-(1-6)-phosphatidylinositol dimannoside mannosyltransferase K14335 pimC; alpha-1,6-mannosyltransferase [EC:2.4.1.-] D A3L23_03063 pimE; Polyprenol-phosphate-mannose-dependent alpha-(1-2)-phosphatidylinositol pentamannoside mannosyltransferase K13669 pimE; alpha-1,2-mannosyltransferase [EC:2.4.1.-] D A3L23_02885 mgtA; GDP-mannose-dependent alpha-mannosyltransferase K12583 mgtA; phosphatidylinositol alpha 1,6-mannosyltransferase [EC:2.4.1.-] D A3L23_04762 Glycogen synthase K16150 K16150; glycogen synthase [EC:2.4.1.11] D A3L23_03109 glgA; Capsular glucan synthase K16148 glgM; alpha-maltose-1-phosphate synthase [EC:2.4.1.342] D A3L23_01845 rodA_1; putative FtsW-like protein K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28] D A3L23_03950 ftsW; Putative lipid II flippase FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28] D A3L23_03277 wecA; Decaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D A3L23_03925 Polyprenol-phosphate-mannose-dependent alpha-(1-2)-phosphatidylinositol mannoside mannosyltransferase K13671 K13671; alpha-1,2-mannosyltransferase [EC:2.4.1.-] D A3L23_03931 mptA; Alpha-(1->6)-mannopyranosyltransferase A K14337 mptA; alpha-1,6-mannosyltransferase [EC:2.4.1.-] D A3L23_04335 Alpha-(1->6)-mannopyranosyltransferase K14339 mptB; alpha-1,6-mannosyltransferase [EC:2.4.1.-] D A3L23_02035 embB; putative arabinosyltransferase B K11386 embB; arabinosyltransferase B [EC:2.4.2.-] D A3L23_02036 embC_1; putative arabinosyltransferase C K11387 embC; arabinosyltransferase C [EC:2.4.2.-] D A3L23_02999 embC_2; putative arabinosyltransferase C K11387 embC; arabinosyltransferase C [EC:2.4.2.-] D A3L23_02040 aftA; Arabinofuranosyltransferase AftA K13686 aftA; galactan 5-O-arabinofuranosyltransferase [EC:2.4.2.46] D A3L23_02024 aftB; Terminal beta-(1->2)-arabinofuranosyltransferase K13687 aftB; arabinofuranosyltransferase [EC:2.4.2.-] D A3L23_04438 Alpha-(1->3)-arabinofuranosyltransferase K16647 aftC; arabinofuranan 3-O-arabinosyltransferase [EC:2.4.2.47] D A3L23_01391 aftD; Alpha-(1->3)-arabinofuranosyltransferase K16648 aftD; arabinofuranan 3-O-arabinosyltransferase [EC:2.4.2.-] D A3L23_02062 glfT1; Galactofuranosyl transferase GlfT1 K16649 glft1; rhamnopyranosyl-N-acetylglucosaminyl-diphospho-decaprenol beta-1,3/1,4-galactofuranosyltransferase [EC:2.4.1.287] D A3L23_02021 glfT2_1; Galactofuranosyl transferase GlfT2 K16650 glft2; galactofuranosylgalactofuranosylrhamnosyl-N-acetylglucosaminyl-diphospho-decaprenol beta-1,5/1,6-galactofuranosyltransferase [EC:2.4.1.288] D A3L23_02060 glfT2_2; Galactofuranosyl transferase GlfT2 K16650 glft2; galactofuranosylgalactofuranosylrhamnosyl-N-acetylglucosaminyl-diphospho-decaprenol beta-1,5/1,6-galactofuranosyltransferase [EC:2.4.1.288] D A3L23_00051 wbbL_1; N-acetylglucosaminyl-diphospho-decaprenol L-rhamnosyltransferase K16870 wbbL; N-acetylglucosaminyl-diphospho-decaprenol L-rhamnosyltransferase [EC:2.4.1.289] D A3L23_01061 otsA; Trehalose-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347] D A3L23_02783 gpgS_1; Glucosyl-3-phosphoglycerate synthase K13693 gpgS; glucosyl-3-phosphoglycerate synthase [EC:2.4.1.266] D A3L23_03104 gpgS_2; Glucosyl-3-phosphoglycerate synthase K13693 gpgS; glucosyl-3-phosphoglycerate synthase [EC:2.4.1.266] C 01005 Lipopolysaccharide biosynthesis proteins [BR:rfa01005] D A3L23_02052 lpxA; Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D A3L23_03277 wecA; Decaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:rfa01011] D A3L23_03289 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D A3L23_02769 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D A3L23_03952 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D A3L23_03949 murD_2; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D A3L23_00388 murE_1; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D A3L23_03946 murE_2; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D A3L23_00898 ddl_1; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D A3L23_04714 ddl_2; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D A3L23_00200 alr; Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D A3L23_00309 murI; Glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D A3L23_01888 mraY_1; Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D A3L23_03948 mraY_2; Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D A3L23_03951 murG_2; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D A3L23_04284 uppP; Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D A3L23_01804 mviN; putative peptidoglycan biosynthesis protein MviN K03980 murJ; putative peptidoglycan lipid II flippase D A3L23_03945 pbpB; Penicillin-binding protein PbpB K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D A3L23_01844 pbpA_2; Penicillin-binding protein A K05364 pbpA; penicillin-binding protein A D A3L23_00138 dacF; D-alanyl-D-alanine carboxypeptidase DacF K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D A3L23_02502 dac; D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D A3L23_01845 rodA_1; putative FtsW-like protein K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28] D A3L23_03950 ftsW; Putative lipid II flippase FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28] D A3L23_00117 putative endopeptidase K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D A3L23_02965 ripA_1; Peptidoglycan endopeptidase RipA K21473 ripA; peptidoglycan DL-endopeptidase RipA [EC:3.4.-.-] D A3L23_04320 ripA_2; Peptidoglycan endopeptidase RipA K21473 ripA; peptidoglycan DL-endopeptidase RipA [EC:3.4.-.-] D A3L23_04388 hypothetical protein K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D A3L23_01809 lytC_1; N-acetylmuramoyl-L-alanine amidase LytC K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D A3L23_04795 lytC_2; N-acetylmuramoyl-L-alanine amidase LytC K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] C 01004 Lipid biosynthesis proteins [BR:rfa01004] D A3L23_03591 fabF_2; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K11533 fas; fatty acid synthase, bacteria type [EC:2.3.1.-] D A3L23_03835 fabD; Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D A3L23_00416 fabF_1; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D A3L23_00443 fabG_4; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D A3L23_01385 fabG_8; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D A3L23_01487 novJ; Short-chain reductase protein NovJ K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D A3L23_01608 ped; (S)-1-Phenylethanol dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D A3L23_04593 budC_3; Diacetyl reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D A3L23_04030 tesB_1; Acyl-CoA thioesterase 2 K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.20] D A3L23_04417 tesB_2; Acyl-CoA thioesterase 2 K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.20] D A3L23_01861 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase 3 K11608 mtfabH; mycobacterial beta-ketoacyl-[acyl-carrier protein] synthase III [EC:2.3.1.301] D A3L23_03833 kasA; 3-oxoacyl-[acyl-carrier-protein] synthase 1 K11609 kasA; meromycolic acid 3-oxoacyl-[acyl-carrier protein] synthase I [EC:2.3.1.293] D A3L23_04316 fabG1; 3-oxoacyl-[acyl-carrier-protein] reductase FabG1 K11610 mabA; meromycolic acid 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.-] D A3L23_02895 hypothetical protein K27071 hadA; meromycolic acid (3R)-3-hydroxyacyl-[acyl-carrier protein] dehydratase HadA [EC:4.2.1.-] D A3L23_02896 hypothetical protein K27072 hadB; meromycolic acid (3R)-3-hydroxyacyl-[acyl-carrier protein] dehydratase HadB [EC:4.2.1.-] D A3L23_01345 hypothetical protein K27689 hadAB; meromycolic acid (3R)-3-hydroxyacyl-[acyl-carrier protein] dehydratase HadAB [EC:4.2.1.-] D A3L23_04315 inhA_2; Enoyl-[acyl-carrier-protein] reductase [NADH] K11611 inhA; meromycolic acid enoyl-[acyl-carrier protein] reductase [EC:1.3.1.118] D A3L23_00640 desA1_1; Putative acyl-[acyl-carrier-protein] desaturase desA1 K03921 FAB2; acyl-[acyl-carrier protein] desaturase [EC:1.14.19.2 1.14.19.11 1.14.19.26] D A3L23_00758 desA1_2; Putative acyl-[acyl-carrier-protein] desaturase desA1 K03921 FAB2; acyl-[acyl-carrier protein] desaturase [EC:1.14.19.2 1.14.19.11 1.14.19.26] D A3L23_01498 desA1_3; Putative acyl-[acyl-carrier-protein] desaturase desA1 K03921 FAB2; acyl-[acyl-carrier protein] desaturase [EC:1.14.19.2 1.14.19.11 1.14.19.26] D A3L23_01832 desA1_4; Putative acyl-[acyl-carrier-protein] desaturase desA1 K03921 FAB2; acyl-[acyl-carrier protein] desaturase [EC:1.14.19.2 1.14.19.11 1.14.19.26] D A3L23_03015 desA1_5; Putative acyl-[acyl-carrier-protein] desaturase desA1 K03921 FAB2; acyl-[acyl-carrier protein] desaturase [EC:1.14.19.2 1.14.19.11 1.14.19.26] D A3L23_00025 desA3_1; Stearoyl-CoA 9-desaturase K22769 desA3; NADPH-dependent stearoyl-CoA 9-desaturase [EC:1.14.19.-] D A3L23_00026 desA3_2; Stearoyl-CoA 9-desaturase K22769 desA3; NADPH-dependent stearoyl-CoA 9-desaturase [EC:1.14.19.-] D A3L23_00889 desA3_3; Stearoyl-CoA 9-desaturase K22769 desA3; NADPH-dependent stearoyl-CoA 9-desaturase [EC:1.14.19.-] D A3L23_03676 desA3_4; Stearoyl-CoA 9-desaturase K22769 desA3; NADPH-dependent stearoyl-CoA 9-desaturase [EC:1.14.19.-] D A3L23_02032 ppsA; Phthiocerol synthesis polyketide synthase type I PpsA K12437 pks13; polyketide synthase 13 D A3L23_01437 acsA_3; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D A3L23_02401 acsA_4; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D A3L23_00684 acsA_2; Acetyl-coenzyme A synthetase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17] D A3L23_00279 acsA_1; Acetyl-coenzyme A synthetase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16] D A3L23_00410 lcfB_1; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D A3L23_02124 lcfB_3; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D A3L23_03167 Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D A3L23_03918 Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D A3L23_04079 lcfB_9; Long-chain-fatty-acid--CoA ligase K03822 K03822; putative long chain acyl-CoA synthase [EC:6.2.1.-] D A3L23_03083 lcfB_6; Long-chain-fatty-acid--CoA ligase K12429 fadD36; fatty acid CoA ligase FadD36 D A3L23_04160 car; Carboxylic acid reductase K12421 fadD9; fatty acid CoA ligase FadD9 D A3L23_00280 fadD3_1; 3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl:CoA ligase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-] D A3L23_00527 Putative ligase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-] D A3L23_03100 Long-chain-fatty-acid--CoA ligase FadD17 K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-] D A3L23_03331 lcfB_7; Long-chain-fatty-acid--CoA ligase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-] D A3L23_02031 Long-chain-fatty-acid--AMP ligase FadD32 K12428 fadD32; fatty acyl-AMP ligase FadD32 [EC:6.2.1.-] D A3L23_01537 plsB1; Putative acyltransferase plsB1 K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D A3L23_03924 plsC_3; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D A3L23_04594 plsC_4; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins [BR:rfa01008] D A3L23_01051 hypothetical protein K05375 mbtH; MbtH protein D A3L23_04975 hypothetical protein K05375 mbtH; MbtH protein D A3L23_04605 npt; 4'-phosphopantetheinyl transferase Npt K02362 entD; enterobactin synthetase component D / holo-[acyl-carrier protein] synthase [EC:6.3.2.14 2.7.8.7] D A3L23_00827 dhbE; 2,3-dihydroxybenzoate-AMP ligase K04787 mbtA; mycobactin salicyl-AMP ligase [EC:6.3.2.-] D A3L23_00828 mbtB; Phenyloxazoline synthase MbtB K04788 mbtB; mycobactin phenyloxazoline synthetase C 01006 Prenyltransferases [BR:rfa01006] D A3L23_03933 sdsA; All-trans-nonaprenyl-diphosphate synthase (geranyl-diphosphate specific) K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29] D A3L23_03008 uppS; (2Z,6E)-farnesyl diphosphate synthase K12503 uppS; short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68] D A3L23_03799 Trans,polycis-polyprenyl diphosphate synthase ((2Z,6E)-farnesyl diphosphate specific) K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D A3L23_03930 crtB; All-trans-phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32] D A3L23_04522 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D A3L23_02854 menA_1; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] D A3L23_04341 ctaB; Protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D A3L23_02023 Decaprenyl-phosphate phosphoribosyltransferase K14136 K14136; decaprenyl-phosphate phosphoribosyltransferase [EC:2.4.2.45] C 01007 Amino acid related enzymes [BR:rfa01007] D A3L23_02300 gluQ; Glutamyl-Q tRNA(Asp) synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D A3L23_04728 gltX; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D A3L23_04084 tyrS; Tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D A3L23_00140 trpS; Tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D A3L23_02537 cysS; Cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D A3L23_03266 argS; Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D A3L23_00540 metG; Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D A3L23_03961 ileS; Isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D A3L23_03729 valS; Valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D A3L23_01791 leuS; Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D A3L23_01863 lysX; Lysylphosphatidylglycerol biosynthesis bifunctional protein LysX K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D A3L23_02519 lysS1; Lysine--tRNA ligase 1 K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D A3L23_04397 aspS; Aspartate--tRNA(Asp/Asn) ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D A3L23_04402 hisS; Histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D A3L23_03804 glyQS; Glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D A3L23_02003 serS; Serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D A3L23_04623 proS_2; Proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D A3L23_04425 thrS; Threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D A3L23_04390 alaS; Alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D A3L23_04068 pheS; Phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D A3L23_04069 pheT; Phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D A3L23_01095 aspC_2; putative aspartate aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D A3L23_01702 aspC_3; putative aspartate aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D A3L23_00736 dapC; putative N-succinyldiaminopimelate aminotransferase DapC K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17] D A3L23_02097 pat; Putative phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D A3L23_03861 putative aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D A3L23_04008 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D A3L23_02829 bioF_2; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D A3L23_02929 bioF_3; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D A3L23_00098 bioF_1; 8-amino-7-oxononanoate synthase K00654 SPT; serine palmitoyltransferase [EC:2.3.1.50] D A3L23_01897 lat; putative L-lysine-epsilon aminotransferase K03918 lat; L-lysine 6-transaminase [EC:2.6.1.36] D A3L23_04074 argD; Acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D A3L23_00331 gabT_1; 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D A3L23_03747 davT; 5-aminovalerate aminotransferase DavT K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D A3L23_03740 ectB; Diaminobutyrate--2-oxoglutarate transaminase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76] D A3L23_04506 bauA; Beta-alanine--pyruvate aminotransferase K12256 spuC; putrescine---pyruvate transaminase [EC:2.6.1.113] D A3L23_02828 bioA; Adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D A3L23_02833 hemL; Glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D A3L23_01945 ilvE_1; Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D A3L23_03892 ilvE_2; Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D A3L23_00703 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00199 Cytochrome P450 [BR:rfa00199] D A3L23_04942 fas1; Cytochrome P450 FAS1 K21035 fas1; cytochrome P450 family 105 subfamily E polypeptide 1 C 00194 Photosynthesis proteins [BR:rfa00194] D A3L23_02479 mauC; Amicyanin K02638 petE; plastocyanin D A3L23_03286 atpC; ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D A3L23_03285 atpD; ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D A3L23_03284 atpG; ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D A3L23_03283 atpA; ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D A3L23_03282 atpH; ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D A3L23_03281 atpF; ATP synthase subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b D A3L23_03280 atpE; ATP synthase subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c D A3L23_03279 atpB; ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:rfa03000] D A3L23_01965 hhaIM; Modification methylase HhaI K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D A3L23_02267 ydiP; putative BsuMI modification methylase subunit YdiP K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D A3L23_05035 hypothetical protein K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D A3L23_01880 tetD; Transposon Tn10 TetD protein K13653 K13653; AraC family transcriptional regulator D A3L23_03029 alkA_2; putative bifunctional transcriptional activator/DNA repair enzyme AlkA K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D A3L23_01895 putative HTH-type transcriptional regulator K05596 argP; LysR family transcriptional regulator, arginine and lysine transport system/DNA replication regulator D A3L23_04929 putative HTH-type transcriptional regulator K05596 argP; LysR family transcriptional regulator, arginine and lysine transport system/DNA replication regulator D A3L23_04514 srlR_2; Glucitol operon repressor K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor D A3L23_00914 rbsR_2; Ribose operon repressor K02529 galR; LacI family transcriptional regulator, galactose operon repressor D A3L23_01186 ccpA_1; Catabolite control protein A K02529 galR; LacI family transcriptional regulator, galactose operon repressor D A3L23_03308 rbsR_3; Ribose operon repressor K02529 galR; LacI family transcriptional regulator, galactose operon repressor D A3L23_03462 cytR; HTH-type transcriptional repressor CytR K02529 galR; LacI family transcriptional regulator, galactose operon repressor D A3L23_03503 rbsR_4; Ribose operon repressor K02529 galR; LacI family transcriptional regulator, galactose operon repressor D A3L23_03505 rbsR_5; Ribose operon repressor K02529 galR; LacI family transcriptional regulator, galactose operon repressor D A3L23_03645 degA_1; HTH-type transcriptional regulator DegA K02529 galR; LacI family transcriptional regulator, galactose operon repressor D A3L23_04129 degA_2; HTH-type transcriptional regulator DegA K02529 galR; LacI family transcriptional regulator, galactose operon repressor D A3L23_03242 dasR; HTH-type transcriptional repressor DasR K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator D A3L23_03607 phnF; HTH-type transcriptional repressor PhnF K24968 phnF; GntR family transcriptional regulator, repressor of the phnDCE operon D A3L23_03304 mngR; Mannosyl-D-glycerate transport/metabolism system repressor MngR K03710 K03710; GntR family transcriptional regulator D A3L23_03601 yvoA; HTH-type transcriptional repressor YvoA K03710 K03710; GntR family transcriptional regulator D A3L23_03290 gabR; HTH-type transcriptional regulatory protein GabR K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D A3L23_04323 acnR; HTH-type transcriptional repressor AcnR K21962 acnR; TetR/AcrR family transcriptional regulator, transcriptional repressor of aconitase D A3L23_02177 rcdA_2; HTH-type transcriptional regulator RcdA K23778 rcdA; TetR/AcrR family transcriptional regulator, regulator of biofilm formation and stress response D A3L23_00126 asnC_1; Regulatory protein AsnC K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA D A3L23_00093 lrp_1; Leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D A3L23_04646 hypothetical protein K21685 ramA; LuxR family transcriptional regulator, regulator of acetate metabolism D A3L23_00743 ohrR_1; Organic hydroperoxide resistance transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator D A3L23_00866 hypothetical protein K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator D A3L23_01065 hypothetical protein K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator D A3L23_02214 ohrR_2; Organic hydroperoxide resistance transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator D A3L23_01468 mta_1; HTH-type transcriptional activator mta K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D A3L23_00551 soxR_1; Redox-sensitive transcriptional activator SoxR K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR D A3L23_02936 soxR_2; Redox-sensitive transcriptional activator SoxR K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR D A3L23_01067 hspR; Putative heat shock protein HspR K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR D A3L23_01953 tipA_2; HTH-type transcriptional activator TipA K21744 tipA; MerR family transcriptional regulator, thiopeptide resistance regulator D A3L23_03802 zur; Zinc uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D A3L23_00373 furA_1; Transcriptional regulator FurA K22297 furA; Fur family transcriptional regulator, stress-responsive regulator D A3L23_00961 furA_2; Transcriptional regulator FurA K22297 furA; Fur family transcriptional regulator, stress-responsive regulator D A3L23_03717 pcaR; Pca regulon regulatory protein K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein D A3L23_02392 crp; cAMP receptor protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D A3L23_00475 nsrR; HTH-type transcriptional repressor NsrR K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor D A3L23_01424 hypothetical protein K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D A3L23_01277 cmtR; HTH-type transcriptional regulator CmtR K21885 cmtR; ArsR family transcriptional regulator, cadmium/lead-responsive transcriptional repressor D A3L23_05132 kmtR_2; HTH-type transcriptional regulator KmtR K21885 cmtR; ArsR family transcriptional regulator, cadmium/lead-responsive transcriptional repressor D A3L23_00504 nmtR; HTH-type transcriptional regulator NmtR K21886 nmtR; ArsR family transcriptional regulator, nickel/cobalt-responsive transcriptional repressor D A3L23_03803 smtB_3; HTH-type transcriptional repressor SmtB K22298 smtB; ArsR family transcriptional regulator, zinc-responsive transcriptional repressor D A3L23_02743 putative HTH-type transcriptional regulator K07110 ramB; XRE family transcriptional regulator, fatty acid utilization regulator D A3L23_04540 clgR_2; Transcriptional regulator ClgR K27043 clgR; XRE family transcriptional regulator, stress-response regulator D A3L23_04491 ideR_1; Iron-dependent repressor IdeR K26252 dtxR; DtxR family transcriptional regulator, iron-dependent repressor D A3L23_04603 ideR_2; Iron-dependent repressor IdeR K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator D A3L23_04191 blaI_1; Transcriptional regulator BlaI K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D A3L23_00062 birA; Bifunctional ligase/repressor BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D A3L23_02101 acoR_2; Acetoin dehydrogenase operon transcriptional activator AcoR K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D A3L23_02809 rex; Redox-sensing transcriptional repressor Rex K01926 rex; redox-sensing transcriptional repressor D A3L23_01324 hypothetical protein K07727 K07727; putative transcriptional regulator D A3L23_01747 hypothetical protein K07727 K07727; putative transcriptional regulator D A3L23_00678 hypothetical protein K07729 K07729; putative transcriptional regulator D A3L23_01701 hypothetical protein K07729 K07729; putative transcriptional regulator D A3L23_02735 hypothetical protein K07729 K07729; putative transcriptional regulator D A3L23_00016 whiB1; Transcriptional regulator WhiB1 K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D A3L23_00046 whmD; Transcriptional regulator WhiB2 K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D A3L23_00191 whiB3_1; putative transcriptional regulator WhiB3 K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D A3L23_01158 whiB_1; Transcriptional regulator WhiB K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D A3L23_01952 whiB3_2; Redox-responsive transcriptional regulator WhiB3 K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D A3L23_02080 whiB_2; Transcriptional regulator WhiB K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D A3L23_02384 whiB4; Transcriptional regulator WhiB4 K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D A3L23_02549 whiB3_3; Redox-responsive transcriptional regulator WhiB3 K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D A3L23_02609 whiB3_4; Redox-responsive transcriptional regulator WhiB3 K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D A3L23_04834 whiB7; putative transcriptional regulator WhiB7 K18958 whiB7; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D A3L23_02820 csoR_2; Copper-sensing transcriptional repressor CsoR K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor D A3L23_03486 pucR_3; Purine catabolism regulatory protein K09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein D A3L23_03489 pucR_4; Purine catabolism regulatory protein K09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein D A3L23_01811 parB; putative chromosome-partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D A3L23_05164 hypothetical protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D A3L23_02534 carD; RNA polymerase-binding transcription factor CarD K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription D A3L23_04076 argR; Arginine repressor K03402 argR; transcriptional regulator of arginine metabolism D A3L23_03789 hrcA; Heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor D A3L23_03222 tenA; Aminopyrimidine aminohydrolase K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2] D A3L23_02297 paaX; Transcriptional repressor PaaX K02616 paaX; phenylacetic acid degradation operon negative regulatory protein D A3L23_01443 deoR_1; Deoxyribonucleoside regulator K05346 deoR; deoxyribonucleoside regulator D A3L23_02206 deoR_2; Deoxyribonucleoside regulator K05346 deoR; deoxyribonucleoside regulator D A3L23_04378 pyrR; Bifunctional protein PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D A3L23_04977 paiB; Protease synthase and sporulation protein PAI 2 K07734 paiB; transcriptional regulator D A3L23_01796 hypothetical protein K07735 algH; putative transcriptional regulator D A3L23_00210 dksA; RNA polymerase-binding transcription factor DksA K06204 dksA; RNA polymerase-binding transcription factor D A3L23_04508 nrdR; Transcriptional repressor NrdR K07738 nrdR; transcriptional repressor NrdR D A3L23_03942 mraZ; Transcriptional regulator MraZ K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:rfa03021] D A3L23_00733 hypothetical protein K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] D A3L23_00223 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D A3L23_02932 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D A3L23_02933 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D A3L23_04369 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D A3L23_04479 sigA; RNA polymerase sigma factor SigA K03086 rpoD; RNA polymerase primary sigma factor D A3L23_04488 sigB; RNA polymerase sigma factor SigB K03087 rpoS; RNA polymerase nonessential primary-like sigma factor D A3L23_00021 sigH; ECF RNA polymerase sigma factor SigH K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D A3L23_00189 sigD_1; ECF RNA polymerase sigma factor SigD K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D A3L23_00667 sigD_2; ECF RNA polymerase sigma factor SigD K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D A3L23_01666 cnrH; RNA polymerase sigma factor CnrH K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D A3L23_01805 sigM; ECF RNA polymerase sigma factor SigM K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D A3L23_03112 sigE; ECF RNA polymerase sigma factor SigE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D A3L23_03549 sigG; ECF RNA polymerase sigma factor SigG K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D A3L23_04451 sigJ_2; ECF RNA polymerase sigma factor SigJ K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D A3L23_04459 sigK; ECF RNA polymerase sigma factor SigK K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D A3L23_04822 hypothetical protein K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D A3L23_03727 sigF; RNA polymerase sigma factor SigF K03090 sigB; RNA polymerase sigma-B factor D A3L23_04616 hypothetical protein K02600 nusA; transcription termination/antitermination protein NusA D A3L23_04379 hypothetical protein K03625 nusB; transcription antitermination protein NusB D A3L23_02899 hypothetical protein K02601 nusG; transcription termination/antitermination protein NusG D A3L23_02200 rsbQ; Sigma factor SigB regulation protein RsbQ K19707 rsbQ; sigma-B regulation protein RsbQ D A3L23_00396 rsbW_1; Serine-protein kinase RsbW K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] D A3L23_01116 rsbW_2; Serine-protein kinase RsbW K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] D A3L23_00210 dksA; RNA polymerase-binding transcription factor DksA K06204 dksA; RNA polymerase-binding transcription factor D A3L23_03002 greA_1; Transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D A3L23_03477 greA_2; Transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D A3L23_03271 hypothetical protein K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:rfa03019] D A3L23_03733 rng; Ribonuclease G K08300 rne; ribonuclease E [EC:3.1.26.12] D A3L23_04697 rnc; Ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3] D A3L23_01467 rnj_1; Ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-] D A3L23_04547 rnj_2; Ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-] D A3L23_03667 orn; Oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D A3L23_03168 deaD_2; ATP-dependent RNA helicase DeaD K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D A3L23_03741 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D A3L23_00498 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D A3L23_04597 pnp; Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D A3L23_03271 hypothetical protein K03628 rho; transcription termination factor Rho D A3L23_01070 dnaK_1; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D A3L23_00192 groL2; 60 kDa chaperonin 2 K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D A3L23_02103 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D A3L23_02696 groL1; 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D A3L23_04717 ppk; Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D A3L23_02718 hypothetical protein K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D A3L23_01949 rraA; Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase K02553 rraA; regulator of ribonuclease activity A D A3L23_04354 Nucleotide-binding protein K06958 rapZ; RNase adapter protein RapZ D A3L23_04252 helY_1; putative helicase HelY K03727 helY; ATP-dependent RNA helicase HelY [EC:5.6.2.6] D A3L23_04507 hypothetical protein K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6] C 03041 Spliceosome C 03011 Ribosome [BR:rfa03011] D A3L23_04050 rpsA_1; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D A3L23_04663 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D A3L23_00252 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D A3L23_00224 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D A3L23_00235 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D A3L23_01734 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D A3L23_02990 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D A3L23_00238 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D A3L23_00208 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D A3L23_00259 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D A3L23_00225 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D A3L23_02989 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D A3L23_00226 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D A3L23_00241 rpsZ; 30S ribosomal protein S14 type Z K02954 RP-S14; small subunit ribosomal protein S14 D A3L23_00594 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D A3L23_04598 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D A3L23_04682 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D A3L23_00249 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D A3L23_00595 rpsR1_1; 30S ribosomal protein S18 1 K02963 RP-S18; small subunit ribosomal protein S18 D A3L23_01732 rpsR1_2; 30S ribosomal protein S18 1 K02963 RP-S18; small subunit ribosomal protein S18 D A3L23_00254 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D A3L23_03768 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D A3L23_02901 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D A3L23_00255 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D A3L23_00258 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D A3L23_00257 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D A3L23_00242 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D A3L23_00237 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D A3L23_01731 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D A3L23_02913 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D A3L23_02900 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D A3L23_02914 rplL_1; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D A3L23_00209 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D A3L23_00244 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D A3L23_00233 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D A3L23_00251 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D A3L23_00222 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D A3L23_00236 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D A3L23_04675 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D A3L23_04066 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D A3L23_03734 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D A3L23_00253 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D A3L23_00256 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D A3L23_00243 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D A3L23_03735 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D A3L23_00592 rpmB_1; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D A3L23_04707 rpmB_2; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D A3L23_00250 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D A3L23_00234 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D A3L23_00590 rpmE2; 50S ribosomal protein L31 type B K02909 RP-L31; large subunit ribosomal protein L31 D A3L23_03272 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D A3L23_00589 rpmF_1; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D A3L23_04698 rpmF_2; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D A3L23_00593 rpmG2_1; 50S ribosomal protein L33 2 K02913 RP-L33; large subunit ribosomal protein L33 D A3L23_02894 rpmG2_2; 50S ribosomal protein L33 2 K02913 RP-L33; large subunit ribosomal protein L33 D A3L23_04065 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D A3L23_00227 rpmJ_1; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D A3L23_04784 rpmJ_2; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D A3L23_00525 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D A3L23_03207 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D A3L23_03292 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D A3L23_03561 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D A3L23_04085 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D A3L23_03208 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D A3L23_03293 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D A3L23_03562 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D A3L23_04086 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D A3L23_03209 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D A3L23_03294 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D A3L23_03563 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D A3L23_04087 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 03009 Ribosome biogenesis [BR:rfa03009] D A3L23_04697 rnc; Ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3] D A3L23_03667 orn; Oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D A3L23_03796 era; GTPase Era K03595 era; GTPase D A3L23_03736 obg; GTPase Obg K03979 obgE; GTPase [EC:3.6.5.-] D A3L23_00210 dksA; RNA polymerase-binding transcription factor DksA K06204 dksA; RNA polymerase-binding transcription factor D A3L23_04616 hypothetical protein K02600 nusA; transcription termination/antitermination protein NusA D A3L23_04379 hypothetical protein K03625 nusB; transcription antitermination protein NusB D A3L23_02899 hypothetical protein K02601 nusG; transcription termination/antitermination protein NusG D A3L23_00537 ksgA; Ribosomal RNA small subunit methyltransferase A K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D A3L23_04363 Putative methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D A3L23_00317 rlmG; Ribosomal RNA large subunit methyltransferase G K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172] D A3L23_04702 rsmD; Ribosomal RNA small subunit methyltransferase D K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D A3L23_03791 rsmE; Ribosomal RNA small subunit methyltransferase E K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D A3L23_01813 rsmG; Ribosomal RNA small subunit methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D A3L23_03943 rsmH; Ribosomal RNA small subunit methyltransferase H K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D A3L23_00544 rsmI; Ribosomal RNA small subunit methyltransferase I K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D A3L23_04091 tlyA; 16S/23S rRNA (cytidine-2'-O)-methyltransferase TlyA K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D A3L23_03108 rlmAII; 23S rRNA (guanine(748)-N(1))-methyltransferase K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187] D A3L23_02538 putative tRNA/rRNA methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D A3L23_04655 rlmN; Dual-specificity RNA methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D A3L23_00746 rluA_1; Ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D A3L23_02093 rluA_2; Ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D A3L23_03194 rluA_3; Ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D A3L23_04102 putative RNA pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D A3L23_03968 putative RNA pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D A3L23_00196 mshD_1; Mycothiol acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase / [ribosomal protein L31]-L-lysine N-acetyltransferase [EC:2.3.1.266 2.3.1.338] D A3L23_04680 rimM; Ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM D A3L23_02301 hypothetical protein K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor D A3L23_03733 rng; Ribonuclease G K08300 rne; ribonuclease E [EC:3.1.26.12] D A3L23_04389 Putative Holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D A3L23_03168 deaD_2; ATP-dependent RNA helicase DeaD K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D A3L23_00024 rsgA_1; Putative ribosome biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D A3L23_01062 rsgA_2; Putative ribosome biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D A3L23_04104 der; GTPase Der K03977 engA; GTPase D A3L23_04519 hflX; GTPase HflX K03665 hflX; GTPase D A3L23_03276 Putative threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D A3L23_04406 relA_2; Bifunctional (p)ppGpp synthase/hydrolase RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D A3L23_04613 rbfA; Ribosome-binding factor A K02834 rbfA; ribosome-binding factor A D A3L23_04617 rimP; Ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP D A3L23_01904 hypothetical protein K14761 rlbA; ribosome-associated protein D A3L23_03761 rsfS; Ribosomal silencing factor RsfS K09710 ybeB; ribosome-associated protein D A3L23_03794 ybeY; Endoribonuclease YbeY K07042 ybeY; probable rRNA maturation factor D A3L23_03035 ychF; Ribosome-binding ATPase YchF K06942 ychF; ribosome-binding ATPase D A3L23_04699 hypothetical protein K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:rfa03016] D A3L23_03445 rbn_1; Ribonuclease BN K00784 rnz; ribonuclease Z [EC:3.1.26.11] D A3L23_01801 cca; CCA-adding enzyme K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] D A3L23_00586 rtcB; RNA-splicing ligase RtcB K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8] D A3L23_02300 gluQ; Glutamyl-Q tRNA(Asp) synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D A3L23_04728 gltX; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D A3L23_04623 proS_2; Proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D A3L23_03961 ileS; Isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D A3L23_01791 leuS; Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D A3L23_00540 metG; Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D A3L23_03266 argS; Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D A3L23_01863 lysX; Lysylphosphatidylglycerol biosynthesis bifunctional protein LysX K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D A3L23_02519 lysS1; Lysine--tRNA ligase 1 K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D A3L23_04397 aspS; Aspartate--tRNA(Asp/Asn) ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D A3L23_04390 alaS; Alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D A3L23_03804 glyQS; Glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D A3L23_04425 thrS; Threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D A3L23_02003 serS; Serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D A3L23_02537 cysS; Cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D A3L23_03729 valS; Valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D A3L23_04402 hisS; Histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D A3L23_04068 pheS; Phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D A3L23_04069 pheT; Phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D A3L23_04084 tyrS; Tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D A3L23_00140 trpS; Tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D A3L23_00830 putative HIT-like protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D A3L23_03234 putative HIT-like protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D A3L23_04526 miaB; tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase K06168 CDK5RAP1; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D A3L23_04265 trmI; tRNA (adenine(58)-N(1))-methyltransferase TrmI K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220] D A3L23_01407 trmB; tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D A3L23_00221 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D A3L23_04604 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D A3L23_04755 iscS; IscS-like cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D A3L23_03276 Putative threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D A3L23_04522 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D A3L23_03582 rph; Ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56] D A3L23_04448 rnd; Ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5] D A3L23_03687 ettA_4; Energy-dependent translational throttle protein EttA K06020 ettA; energy-dependent translational throttle protein EttA D A3L23_00022 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-] D A3L23_02274 tadA_1; tRNA-specific adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D A3L23_04679 trmD; tRNA (guanine-N(1)-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D A3L23_00156 trmL; tRNA (cytidine(34)-2'-O)-methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D A3L23_04067 aviRb; 23S rRNA (uridine(2479)-2'-O)-methyltransferase K03437 spoU; RNA methyltransferase, TrmH family D A3L23_00746 rluA_1; Ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D A3L23_02093 rluA_2; Ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D A3L23_03194 rluA_3; Ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D A3L23_04754 mnmA; tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D A3L23_00780 gcvT_1; Aminomethyltransferase K06980 ygfZ; tRNA-modifying protein YgfZ D A3L23_02288 tgt; Queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D A3L23_02504 tilS; tRNA(Ile)-lysidine synthase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D A3L23_00197 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D A3L23_00195 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D A3L23_00198 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D A3L23_04597 pnp; Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:rfa03012] D A3L23_04615 infB; Translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D A3L23_04064 infC; Translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D A3L23_03528 ettA_3; Energy-dependent translational throttle protein EttA K06158 ABCF3; ATP-binding cassette, subfamily F, member 3 D A3L23_04662 tsf; Elongation factor Ts K02357 tsf; elongation factor Ts D A3L23_02992 tuf; Elongation factor Tu K02358 tuf; elongation factor Tu D A3L23_02991 fusA; Elongation factor G K02355 fusA; elongation factor G D A3L23_03273 prfA; Peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D A3L23_04660 frr; Ribosome-recycling factor K02838 frr; ribosome recycling factor D A3L23_00366 prmB_1; 50S ribosomal protein L3 glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D A3L23_01558 prmB_2; 50S ribosomal protein L3 glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D A3L23_03275 prmC_1; Release factor glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D A3L23_00526 pth; Peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D A3L23_00228 infA; Translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D A3L23_04380 efp; Elongation factor P K02356 efp; elongation factor P D A3L23_04815 prfB; Peptide chain release factor 2 K02836 prfB; peptide chain release factor 2 D A3L23_00528 prfC; Peptide chain release factor 3 K02837 prfC; peptide chain release factor 3 C 03110 Chaperones and folding catalysts [BR:rfa03110] D A3L23_02561 clpB; Chaperone protein ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D A3L23_02520 clpC1_2; ATP-dependent Clp protease ATP-binding subunit ClpC1 K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC D A3L23_03710 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D A3L23_00665 htpG; Chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG D A3L23_01070 dnaK_1; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D A3L23_01112 hscA_3; Chaperone protein HscA K04044 hscA; molecular chaperone HscA D A3L23_00192 groL2; 60 kDa chaperonin 2 K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D A3L23_02103 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D A3L23_02696 groL1; 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D A3L23_01068 dnaJ1; Chaperone protein DnaJ 1 K03686 dnaJ; molecular chaperone DnaJ D A3L23_03790 dnaJ2; Chaperone protein DnaJ 2 K03686 dnaJ; molecular chaperone DnaJ D A3L23_01069 grpE; Protein GrpE K03687 GRPE; molecular chaperone GrpE D A3L23_01336 18 kDa heat shock protein K13993 HSP20; HSP20 family protein D A3L23_01909 18 kDa heat shock protein K13993 HSP20; HSP20 family protein D A3L23_03999 hslR; Heat shock protein 15 K04762 hslR; ribosome-associated heat shock protein Hsp15 D A3L23_00193 groS; 10 kDa chaperonin K04078 groES; chaperonin GroES D A3L23_03114 hhoB_2; Putative serine protease HhoB K04771 degP; serine protease Do [EC:3.4.21.107] D A3L23_02506 ftsH_1; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D A3L23_03279 atpB; ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a D A3L23_00217 Thermophilic serine proteinase K14743 mycP; membrane-anchored mycosin MYCP [EC:3.4.21.-] D A3L23_01836 ppiA; Peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D A3L23_04404 ppiB_1; putative peptidyl-prolyl cis-trans isomerase B K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D A3L23_04405 ppiB_2; putative peptidyl-prolyl cis-trans isomerase B K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D A3L23_01808 trxA_2; Thioredoxin K03671 TXN; thioredoxin D A3L23_04045 trxC; Putative thioredoxin-2 K03671 TXN; thioredoxin D A3L23_03570 Thioredoxin C-1 K05838 ybbN; putative thioredoxin C 04131 Membrane trafficking [BR:rfa04131] D A3L23_03732 ndkA; Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D A3L23_01975 hypothetical protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family D A3L23_03921 hypothetical protein K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D A3L23_04351 gapA; Glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D A3L23_02793 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D A3L23_04029 pyk; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D A3L23_00665 htpG; Chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG D A3L23_03672 hypothetical protein K06902 UMF1; MFS transporter, UMF1 family C 04121 Ubiquitin system [BR:rfa04121] D A3L23_04261 pup; Prokaryotic ubiquitin-like protein Pup K13570 pup; prokaryotic ubiquitin-like protein Pup C 03051 Proteasome [BR:rfa03051] D A3L23_00665 htpG; Chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG D A3L23_04259 prcA2; Proteasome subunit alpha 2 K03432 psmA; proteasome alpha subunit [EC:3.4.25.1] D A3L23_04260 prcB1; Proteasome subunit beta 1 K03433 psmB; proteasome beta subunit [EC:3.4.25.1] D A3L23_04263 arc; Proteasome-associated ATPase K13527 mpa; proteasome-associated ATPase D A3L23_04257 pafA; Pup--protein ligase K13571 pafA; proteasome accessory factor A [EC:6.3.1.19] D A3L23_04256 hypothetical protein K13572 pafB; proteasome accessory factor B D A3L23_04255 hypothetical protein K13573 pafC; proteasome accessory factor C D A3L23_04262 dop; Pup deamidase/depupylase K20814 dop; Pup amidohydrolase [EC:3.5.1.119] C 03032 DNA replication proteins [BR:rfa03032] D A3L23_01569 rnhA; Ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D A3L23_01965 hhaIM; Modification methylase HhaI K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D A3L23_02267 ydiP; putative BsuMI modification methylase subunit YdiP K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D A3L23_05035 hypothetical protein K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D A3L23_04719 hypothetical protein K03530 hupB; DNA-binding protein HU-beta D A3L23_01818 dnaA; Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D A3L23_01729 dnaB_2; Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D A3L23_03812 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D A3L23_01733 ssb_1; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D A3L23_03686 ssb_2; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D A3L23_03970 dnaE1; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D A3L23_01820 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D A3L23_03767 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D A3L23_02420 dnaX_2; DNA polymerase III subunit gamma/tau K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D A3L23_03496 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D A3L23_03912 polC; DNA polymerase III PolC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D A3L23_02331 dnaX_1; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D A3L23_03864 pspA_5; Phosphoserine phosphatase 1 K22316 rhnA-cobC; ribonuclease H / adenosylcobalamin/alpha-ribazole phosphatase [EC:3.1.26.4 3.1.3.73] D A3L23_04673 rnhB; Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D A3L23_04044 polA_1; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D A3L23_04750 ligA; DNA ligase A K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D A3L23_01827 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D A3L23_01826 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D A3L23_02419 topA; DNA topoisomerase 1 K03168 topA; DNA topoisomerase I [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:rfa03036] D A3L23_01965 hhaIM; Modification methylase HhaI K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D A3L23_02267 ydiP; putative BsuMI modification methylase subunit YdiP K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D A3L23_05035 hypothetical protein K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D A3L23_04697 rnc; Ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3] D A3L23_04671 lsr2_1; Nucleoid-associated protein Lsr2 K26249 lsr2; nucleoid-associated protein Lsr2 D A3L23_04796 lsr2_2; Nucleoid-associated protein Lsr2 K26249 lsr2; nucleoid-associated protein Lsr2 D A3L23_04912 lsr2_3; Nucleoid-associated protein Lsr2 K26249 lsr2; nucleoid-associated protein Lsr2 D A3L23_05166 lsr2_4; Nucleoid-associated protein Lsr2 K26249 lsr2; nucleoid-associated protein Lsr2 D A3L23_04719 hypothetical protein K03530 hupB; DNA-binding protein HU-beta D A3L23_01818 dnaA; Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D A3L23_00344 dps; DNA protection during starvation protein K04047 dps; starvation-inducible DNA-binding protein D A3L23_02374 ftpA; Fine tangled pili major subunit K04047 dps; starvation-inducible DNA-binding protein D A3L23_01895 putative HTH-type transcriptional regulator K05596 argP; LysR family transcriptional regulator, arginine and lysine transport system/DNA replication regulator D A3L23_04929 putative HTH-type transcriptional regulator K05596 argP; LysR family transcriptional regulator, arginine and lysine transport system/DNA replication regulator D A3L23_00093 lrp_1; Leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D A3L23_04692 smc_2; Chromosome partition protein Smc K03529 smc; chromosome segregation protein D A3L23_04100 scpA_1; Segregation and condensation protein A K05896 scpA; segregation and condensation protein A D A3L23_04101 hypothetical protein K06024 scpB; segregation and condensation protein B D A3L23_04812 ftsE; Cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D A3L23_03945 pbpB; Penicillin-binding protein PbpB K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D A3L23_04544 spoIIIE; DNA translocase SpoIIIE K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D A3L23_03953 ftsQ; Cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ D A3L23_01845 rodA_1; putative FtsW-like protein K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28] D A3L23_03950 ftsW; Putative lipid II flippase FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28] D A3L23_04811 ftsX; Cell division protein FtsX K09811 ftsX; cell division transport system permease protein D A3L23_03954 ftsZ; Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D A3L23_01564 zapE_1; Cell division protein ZapE K06916 zapE; cell division protein ZapE D A3L23_04435 zapE_2; Cell division protein ZapE K06916 zapE; cell division protein ZapE D A3L23_01809 lytC_1; N-acetylmuramoyl-L-alanine amidase LytC K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D A3L23_04795 lytC_2; N-acetylmuramoyl-L-alanine amidase LytC K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D A3L23_03957 sepF; Cell division protein SepF K09772 sepF; cell division inhibitor SepF D A3L23_00010 soj_1; Sporulation initiation inhibitor protein Soj K03496 parA; chromosome partitioning protein D A3L23_01812 soj_2; Sporulation initiation inhibitor protein Soj K03496 parA; chromosome partitioning protein D A3L23_03360 soj_3; Sporulation initiation inhibitor protein Soj K03496 parA; chromosome partitioning protein D A3L23_04099 soj_4; Sporulation initiation inhibitor protein Soj K03496 parA; chromosome partitioning protein D A3L23_04862 soj_5; Sporulation initiation inhibitor protein Soj K03496 parA; chromosome partitioning protein D A3L23_04879 parA; Chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein D A3L23_01811 parB; putative chromosome-partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D A3L23_05164 hypothetical protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D A3L23_01813 rsmG; Ribosomal RNA small subunit methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D A3L23_04666 xerC_2; Tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC D A3L23_04098 xerD_1; Tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD D A3L23_03118 ylxH; Flagellum site-determining protein YlxH K03593 mrp; ATP-binding protein involved in chromosome partitioning D A3L23_04352 whiA; Putative sporulation transcription regulator WhiA K09762 whiA; cell division protein WhiA C 03400 DNA repair and recombination proteins [BR:rfa03400] D A3L23_02594 ogt_1; Methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D A3L23_03028 ogt_2; Methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D A3L23_00686 phrA; Deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D A3L23_01935 phr; Deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D A3L23_04709 ung; Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D A3L23_04083 Putative 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] D A3L23_02527 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D A3L23_02394 nth; Endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D A3L23_00733 hypothetical protein K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] D A3L23_02651 mutT3; Putative 8-oxo-dGTP diphosphatase 3 K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D A3L23_02677 nudC_1; NADH pyrophosphatase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D A3L23_03065 mutT2; Putative 8-oxo-dGTP diphosphatase 2 K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D A3L23_04473 dut; Deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D A3L23_03191 phrB; (6-4) photolyase K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13] D A3L23_03073 hypothetical protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D A3L23_03029 alkA_2; putative bifunctional transcriptional activator/DNA repair enzyme AlkA K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D A3L23_03106 tag; DNA-3-methyladenine glycosylase 1 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D A3L23_00635 fpg2; putative formamidopyrimidine-DNA glycosylase-like protein K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D A3L23_04140 mutM; Formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D A3L23_04696 fpg1; Formamidopyrimidine-DNA glycosylase 1 K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D A3L23_00103 nei1_1; Endonuclease 8 1 K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18] D A3L23_00923 nei1_2; Endonuclease 8 1 K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18] D A3L23_03703 nei1_3; Endonuclease 8 1 K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18] D A3L23_00141 exoA; Exodeoxyribonuclease K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2] D A3L23_02663 xthA; Exodeoxyribonuclease III K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2] D A3L23_01584 end; putative endonuclease 4 K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D A3L23_04750 ligA; DNA ligase A K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D A3L23_04044 polA_1; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D A3L23_00465 uvrA_1; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A D A3L23_04062 uvrA_3; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A D A3L23_04054 uvrB; UvrABC system protein B K03702 uvrB; excinuclease ABC subunit B D A3L23_04355 uvrC; UvrABC system protein C K03703 uvrC; excinuclease ABC subunit C D A3L23_00615 uvrD1; ATP-dependent DNA helicase UvrD1 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D A3L23_04836 uvrD2; ATP-dependent DNA helicase UvrD2 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D A3L23_04841 pcrA_1; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D A3L23_02932 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D A3L23_02933 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D A3L23_00223 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D A3L23_04369 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D A3L23_00507 mfd; Transcription-repair-coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D A3L23_03020 xseA; Exodeoxyribonuclease 7 large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D A3L23_03019 xseB; Exodeoxyribonuclease 7 small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D A3L23_03970 dnaE1; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D A3L23_01820 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D A3L23_03767 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D A3L23_02420 dnaX_2; DNA polymerase III subunit gamma/tau K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D A3L23_03496 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D A3L23_03912 polC; DNA polymerase III PolC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D A3L23_02331 dnaX_1; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D A3L23_01733 ssb_1; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D A3L23_03686 ssb_2; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D A3L23_02266 vsr; Very short patch repair protein K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-] D A3L23_03543 recB; RecBCD enzyme subunit RecB K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D A3L23_03542 recC; RecBCD enzyme subunit RecC K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] D A3L23_03544 recD_3; RecBCD enzyme subunit RecD K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D A3L23_04532 recA; Protein RecA K03553 recA; recombination protein RecA D A3L23_04413 ruvA; Holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D A3L23_04412 ruvB; Holliday junction ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D A3L23_04414 ruvC; Crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D A3L23_04366 priA_2; putative primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D A3L23_03026 sbcC; Nuclease SbcCD subunit C K03546 sbcC; DNA repair protein SbcC/Rad50 D A3L23_03025 sbcD; Nuclease SbcCD subunit D K03547 sbcD; DNA repair protein SbcD/Mre11 D A3L23_02532 hypothetical protein K04485 radA; DNA repair protein RadA/Sms D A3L23_01822 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF D A3L23_04704 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D A3L23_03798 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D A3L23_02353 recR; Recombination protein RecR K06187 recR; recombination protein RecR D A3L23_04093 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D A3L23_03668 hypothetical protein K06915 herA; DNA double-strand break repair helicase HerA and related ATPase D A3L23_04327 hypothetical protein K10979 ku; DNA end-binding protein Ku D A3L23_01552 hypothetical protein K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] D A3L23_05167 hypothetical protein K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] D A3L23_01827 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D A3L23_01826 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D A3L23_02419 topA; DNA topoisomerase 1 K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D A3L23_04719 hypothetical protein K03530 hupB; DNA-binding protein HU-beta D A3L23_03741 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D A3L23_02555 dinB_2; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D A3L23_03300 dinB_3; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D A3L23_03963 dinB_4; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D A3L23_04510 lexA; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88] D A3L23_00175 dinB_1; DNA polymerase IV K14161 imuB; protein ImuB D A3L23_00167 dnaE2; Error-prone DNA polymerase K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7] D A3L23_04531 recX; Regulatory protein RecX K03565 recX; regulatory protein D A3L23_03575 hypothetical protein K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] D A3L23_00102 deaD_1; ATP-dependent RNA helicase DeaD K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] D A3L23_03425 rhpA; DEAD-box ATP-dependent RNA helicase RhpA K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] D A3L23_04718 mutT1; putative 8-oxo-dGTP diphosphatase 1 K23258 mutT1; 8-oxo-(d)GTP phosphatase [EC:3.6.1.69] D A3L23_04097 nudF; ADP-ribose pyrophosphatase K01554 K01554; 8-oxo-dGDP phosphatase [EC:3.6.1.58] D A3L23_04781 nrdE2; Ribonucleoside-diphosphate reductase subunit alpha 2 K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D A3L23_04779 nrdF2; Ribonucleoside-diphosphate reductase subunit beta nrdF2 K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D A3L23_04612 nrnA; Bifunctional oligoribonuclease and PAP phosphatase NrnA K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] C 03029 Mitochondrial biogenesis [BR:rfa03029] D A3L23_04615 infB; Translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D A3L23_04064 infC; Translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D A3L23_04662 tsf; Elongation factor Ts K02357 tsf; elongation factor Ts D A3L23_02992 tuf; Elongation factor Tu K02358 tuf; elongation factor Tu D A3L23_02991 fusA; Elongation factor G K02355 fusA; elongation factor G D A3L23_03796 era; GTPase Era K03595 era; GTPase D A3L23_04084 tyrS; Tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D A3L23_01791 leuS; Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D A3L23_04397 aspS; Aspartate--tRNA(Asp/Asn) ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D A3L23_03804 glyQS; Glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D A3L23_03266 argS; Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D A3L23_03450 gatA_3; Glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D A3L23_04747 gatA_4; Glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D A3L23_04740 gatB; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D A3L23_04748 gatC; Glutamyl-tRNA(Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D A3L23_00536 nucA; Nuclease K01173 ENDOG; endonuclease G, mitochondrial D A3L23_01733 ssb_1; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D A3L23_03686 ssb_2; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D A3L23_01070 dnaK_1; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D A3L23_01069 grpE; Protein GrpE K03687 GRPE; molecular chaperone GrpE D A3L23_00192 groL2; 60 kDa chaperonin 2 K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D A3L23_02103 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D A3L23_02696 groL1; 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D A3L23_00193 groS; 10 kDa chaperonin K04078 groES; chaperonin GroES D A3L23_01068 dnaJ1; Chaperone protein DnaJ 1 K03686 dnaJ; molecular chaperone DnaJ D A3L23_03790 dnaJ2; Chaperone protein DnaJ 2 K03686 dnaJ; molecular chaperone DnaJ D A3L23_04755 iscS; IscS-like cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D A3L23_03118 ylxH; Flagellum site-determining protein YlxH K03593 mrp; ATP-binding protein involved in chromosome partitioning D A3L23_04341 ctaB; Protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D A3L23_04338 ctaA; Heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9] D A3L23_00142 yidC_1; Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D A3L23_01816 yidC_2; Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D A3L23_00665 htpG; Chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:rfa02000] D A3L23_02286 putative ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D A3L23_02287 putative ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D A3L23_02268 Putative multidrug export ATP-binding/permease protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D A3L23_02269 putative ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D A3L23_03147 Putative multidrug export ATP-binding/permease protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D A3L23_03684 Putative multidrug export ATP-binding/permease protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D A3L23_00775 putative ABC transporter ATP-binding protein K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC D A3L23_00776 cydD; ATP-binding/permease protein CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD D A3L23_00533 ettA_1; Energy-dependent translational throttle protein EttA K15738 uup; ABC transport system ATP-binding/permease protein D A3L23_01059 Putative multidrug export ATP-binding/permease protein K02021 ABC.MR; putative ABC transport system ATP-binding protein D A3L23_03778 sbpA; Sulfate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D A3L23_03779 cysT; Sulfate transport system permease protein CysT K02046 cysU; sulfate/thiosulfate transport system permease protein D A3L23_03780 cysW_2; Sulfate transport system permease protein CysW K02047 cysW; sulfate/thiosulfate transport system permease protein D A3L23_03781 cysA_2; Sulfate/thiosulfate import ATP-binding protein CysA K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D A3L23_04608 modA; Molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein D A3L23_04609 modB; Molybdenum transport system permease protein ModB K02018 modB; molybdate transport system permease protein D A3L23_04610 modC; Molybdenum import ATP-binding protein ModC K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D A3L23_03376 ssuA; Putative aliphatic sulfonates-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D A3L23_03374 ssuC_4; Putative aliphatic sulfonates transport permease protein SsuC K15554 ssuC; sulfonate transport system permease protein D A3L23_03375 ssuB_1; Aliphatic sulfonates import ATP-binding protein SsuB K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D A3L23_00814 fbpA_1; Fe(3+)-binding periplasmic protein K02012 afuA; iron(III) transport system substrate-binding protein D A3L23_05127 fbpA_7; Fe(3+)-binding periplasmic protein K02012 afuA; iron(III) transport system substrate-binding protein D A3L23_00813 cysW_1; Sulfate transport system permease protein CysW K02011 afuB; iron(III) transport system permease protein D A3L23_05126 cysW_3; Sulfate transport system permease protein CysW K02011 afuB; iron(III) transport system permease protein D A3L23_00812 fbpC_1; Fe(3+) ions import ATP-binding protein FbpC K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D A3L23_05125 fbpC2; Fe(3+) ions import ATP-binding protein FbpC 2 K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D A3L23_02310 hypothetical protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D A3L23_02308 phnV; Putative 2-aminoethylphosphonate transport system permease protein PhnV K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D A3L23_02309 hypothetical protein K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D A3L23_02307 cysA_1; Sulfate/thiosulfate import ATP-binding protein CysA K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D A3L23_03140 opuCC; Glycine betaine/carnitine/choline-binding protein OpuCC K05845 opuC; osmoprotectant transport system substrate-binding protein D A3L23_03141 hypothetical protein K05845 opuC; osmoprotectant transport system substrate-binding protein D A3L23_03878 osmX; Osmoprotectant-binding protein OsmX K05845 opuC; osmoprotectant transport system substrate-binding protein D A3L23_03137 opuBB_1; Choline transport system permease protein OpuBB K05846 opuBD; osmoprotectant transport system permease protein D A3L23_03138 opuCB_1; Glycine betaine/carnitine/choline transport system permease protein OpuCB K05846 opuBD; osmoprotectant transport system permease protein D A3L23_03879 opuCB_2; Glycine betaine/carnitine/choline transport system permease protein OpuCB K05846 opuBD; osmoprotectant transport system permease protein D A3L23_03881 opuBB_2; Choline transport system permease protein OpuBB K05846 opuBD; osmoprotectant transport system permease protein D A3L23_03139 opuBA; Choline transport ATP-binding protein OpuBA K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D A3L23_03880 osmV; Osmoprotectant import ATP-binding protein OsmV K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D A3L23_00459 Putative thiamine biosynthesis protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D A3L23_03221 thiY_1; Formylaminopyrimidine-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D A3L23_03449 hypothetical protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D A3L23_03460 thiY_2; Formylaminopyrimidine-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D A3L23_03220 ssuC_3; Putative aliphatic sulfonates transport permease protein SsuC K02050 ABC.SN.P; NitT/TauT family transport system permease protein D A3L23_03447 ssuC_6; Putative aliphatic sulfonates transport permease protein SsuC K02050 ABC.SN.P; NitT/TauT family transport system permease protein D A3L23_03461 ssuC_7; Putative aliphatic sulfonates transport permease protein SsuC K02050 ABC.SN.P; NitT/TauT family transport system permease protein D A3L23_00456 cmpD_1; Bicarbonate transport ATP-binding protein CmpD K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D A3L23_03219 cmpD_2; Bicarbonate transport ATP-binding protein CmpD K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D A3L23_03448 tauB; Taurine import ATP-binding protein TauB K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D A3L23_03459 ssuB_2; Aliphatic sulfonates import ATP-binding protein SsuB K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D A3L23_01439 sugC_1; Trehalose import ATP-binding protein SugC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D A3L23_01448 ugpC; sn-glycerol-3-phosphate import ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D A3L23_02364 sugC_3; Trehalose import ATP-binding protein SugC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D A3L23_03127 sugC_4; Trehalose import ATP-binding protein SugC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D A3L23_01765 putative ABC transporter-binding protein K10236 thuE; trehalose/maltose transport system substrate-binding protein D A3L23_03124 lpqY; Trehalose-binding lipoprotein LpqY K10236 thuE; trehalose/maltose transport system substrate-binding protein D A3L23_01764 sugA_2; Trehalose transport system permease protein SugA K10237 thuF; trehalose/maltose transport system permease protein D A3L23_03125 sugA_3; Trehalose transport system permease protein SugA K10237 thuF; trehalose/maltose transport system permease protein D A3L23_01763 sugB_2; Trehalose transport system permease protein SugB K10238 thuG; trehalose/maltose transport system permease protein D A3L23_03126 sugB_3; Trehalose transport system permease protein SugB K10238 thuG; trehalose/maltose transport system permease protein D A3L23_00856 chvE; Multiple sugar-binding periplasmic receptor ChvE K10546 chvE; putative multiple sugar transport system substrate-binding protein D A3L23_00858 xylH; Xylose transport system permease protein XylH K10547 gguB; putative multiple sugar transport system permease protein D A3L23_00857 xylG; Xylose import ATP-binding protein XylG K10548 gguA; putative multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D A3L23_00919 rbsB_1; D-ribose-binding periplasmic protein K10552 frcB; fructose transport system substrate-binding protein D A3L23_00918 rbsC_2; Ribose transport system permease protein RbsC K10553 frcC; fructose transport system permease protein D A3L23_00917 rbsA_2; Ribose import ATP-binding protein RbsA K10554 frcA; fructose transport system ATP-binding protein D A3L23_01002 hypothetical protein K10439 rbsB; ribose transport system substrate-binding protein D A3L23_03383 ytfQ_2; ABC transporter periplasmic-binding protein YtfQ K10439 rbsB; ribose transport system substrate-binding protein D A3L23_03509 rbsB_2; D-ribose-binding periplasmic protein K10439 rbsB; ribose transport system substrate-binding protein D A3L23_01003 lsrD; Autoinducer 2 import system permease protein LsrD K10440 rbsC; ribose transport system permease protein D A3L23_03382 rbsC_3; Ribose transport system permease protein RbsC K10440 rbsC; ribose transport system permease protein D A3L23_03384 rbsA_5; Ribose import ATP-binding protein RbsA K10440 rbsC; ribose transport system permease protein D A3L23_03508 alsC; D-allose transport system permease protein AlsC K10440 rbsC; ribose transport system permease protein D A3L23_01004 rbsA_3; Ribose import ATP-binding protein RbsA K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D A3L23_00419 ytfQ_1; ABC transporter periplasmic-binding protein YtfQ K23508 ytfQ; galactofuranose transport system substrate-binding protein D A3L23_00421 ytfT; Inner membrane ABC transporter permease protein YtfT K23509 ytfT; galactofuranose transport system permease protein D A3L23_00422 yjfF; Inner membrane ABC transporter permease protein YjfF K23509 ytfT; galactofuranose transport system permease protein D A3L23_00420 rbsA_1; Ribose import ATP-binding protein RbsA K10820 ytfR; galactofuranose transport system ATP-binding protein [EC:7.5.2.9] D A3L23_01510 ugpB_2; sn-glycerol-3-phosphate-binding periplasmic protein UgpB K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein D A3L23_01512 ugpA_2; sn-glycerol-3-phosphate transport system permease protein UgpA K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein D A3L23_01511 araQ; L-arabinose transport system permease protein AraQ K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein D A3L23_01509 sugC_2; Trehalose import ATP-binding protein SugC K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10] D A3L23_01442 putative ABC transporter-binding protein K10227 smoE; polyol transport system substrate-binding protein D A3L23_01441 ugpA_1; sn-glycerol-3-phosphate transport system permease protein UgpA K10228 smoF; polyol transport system permease protein D A3L23_01440 sugB_1; Trehalose transport system permease protein SugB K10229 smoG; polyol transport system permease protein D A3L23_02778 tmpC; Membrane lipoprotein TmpC K07335 bmpA; basic membrane protein A and related proteins D A3L23_02780 hypothetical protein K23535 nupB; general nucleoside transport system permease protein D A3L23_02781 hypothetical protein K23536 nupC; general nucleoside transport system permease protein D A3L23_02779 rbsA_4; Ribose import ATP-binding protein RbsA K23537 nupA; general nucleoside transport system ATP-binding protein D A3L23_02203 hypothetical protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D A3L23_02918 hypothetical protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D A3L23_02919 hypothetical protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D A3L23_02920 hypothetical protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D A3L23_02921 hypothetical protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D A3L23_02922 hypothetical protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D A3L23_02923 hypothetical protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D A3L23_02916 mlaE_1; putative phospholipid ABC transporter permease protein MlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D A3L23_02917 mlaE_2; putative phospholipid ABC transporter permease protein MlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D A3L23_02915 mkl; putative ribonucleotide transport ATP-binding protein mkl K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D A3L23_02924 hypothetical protein K18481 mas; Mce-associated membrane protein D A3L23_02925 hypothetical protein K18481 mas; Mce-associated membrane protein D A3L23_01454 ugpB_1; sn-glycerol-3-phosphate-binding periplasmic protein UgpB K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D A3L23_01452 sugA_1; Trehalose transport system permease protein SugA K02025 ABC.MS.P; multiple sugar transport system permease protein D A3L23_01453 ycjP; Inner membrane ABC transporter permease protein YcjP K02026 ABC.MS.P1; multiple sugar transport system permease protein D A3L23_00137 hypothetical protein K02058 ABC.SS.S; simple sugar transport system substrate-binding protein D A3L23_00136 rbsC_1; Ribose transport system permease protein RbsC K02057 ABC.SS.P; simple sugar transport system permease protein D A3L23_00135 mglA_1; Galactose/methyl galactoside import ATP-binding protein MglA K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-] D A3L23_03507 mglA_2; Galactose/methyl galactoside import ATP-binding protein MglA K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-] D A3L23_00765 pstS3; Phosphate-binding protein PstS 3 K02040 pstS; phosphate transport system substrate-binding protein D A3L23_00764 pstC2; Phosphate transport system permease protein PstC 2 K02037 pstC; phosphate transport system permease protein D A3L23_00763 pstA; Phosphate transport system permease protein PstA K02038 pstA; phosphate transport system permease protein D A3L23_00762 pstB1; Phosphate import ATP-binding protein PstB 1 K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D A3L23_03609 phnD; Phosphate-import protein PhnD K02044 phnD; phosphonate transport system substrate-binding protein D A3L23_03611 phnE; Phosphate-import permease protein PhnE K02042 phnE; phosphonate transport system permease protein D A3L23_03610 phnC; Phosphate-import ATP-binding protein PhnC K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2] D A3L23_03117 glnP; Glutamine transport system permease protein GlnP K10036 glnH; glutamine transport system substrate-binding protein D A3L23_03116 artM; Arginine transport ATP-binding protein ArtM K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1] D A3L23_04528 glnH_2; ABC transporter glutamine-binding protein GlnH K10005 gluB; glutamate transport system substrate-binding protein D A3L23_04529 glnM; putative glutamine ABC transporter permease protein GlnM K10006 gluC; glutamate transport system permease protein D A3L23_04530 artQ_2; Arginine transport system permease protein ArtQ K10007 gluD; glutamate transport system permease protein D A3L23_04527 glnQ_3; Glutamine transport ATP-binding protein GlnQ K10008 gluA; glutamate transport system ATP-binding protein [EC:7.4.2.1] D A3L23_03173 tcyB; L-cystine transport system permease protein TcyB K02424 tcyA; L-cystine transport system substrate-binding protein D A3L23_03172 tcyC_2; L-cystine import ATP-binding protein TcyC K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1] D A3L23_01383 hypothetical protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D A3L23_04039 hypothetical protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D A3L23_01381 livH_1; High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein D A3L23_04043 livH_4; High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein D A3L23_01382 livH_2; High-affinity branched-chain amino acid transport system permease protein LivH K01998 livM; branched-chain amino acid transport system permease protein D A3L23_04042 hypothetical protein K01998 livM; branched-chain amino acid transport system permease protein D A3L23_01379 lptB_1; Lipopolysaccharide export system ATP-binding protein LptB K01995 livG; branched-chain amino acid transport system ATP-binding protein D A3L23_04041 lptB_3; Lipopolysaccharide export system ATP-binding protein LptB K01995 livG; branched-chain amino acid transport system ATP-binding protein D A3L23_01380 livF_1; High-affinity branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein D A3L23_04040 livF_3; High-affinity branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein D A3L23_03849 metQ; Methionine-binding lipoprotein MetQ K02073 metQ; D-methionine transport system substrate-binding protein D A3L23_01397 amiC_1; Aliphatic amidase expression-regulating protein K11959 urtA; urea transport system substrate-binding protein D A3L23_02734 amiC_2; Aliphatic amidase expression-regulating protein K11959 urtA; urea transport system substrate-binding protein D A3L23_02733 livH_3; High-affinity branched-chain amino acid transport system permease protein LivH K11960 urtB; urea transport system permease protein D A3L23_02732 hypothetical protein K11961 urtC; urea transport system permease protein D A3L23_02731 lptB_2; Lipopolysaccharide export system ATP-binding protein LptB K11962 urtD; urea transport system ATP-binding protein D A3L23_02730 livF_2; High-affinity branched-chain amino acid transport ATP-binding protein LivF K11963 urtE; urea transport system ATP-binding protein D A3L23_01775 artJ_1; ABC transporter arginine-binding protein 1 K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D A3L23_02614 fliY; Cystine-binding periplasmic protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D A3L23_02649 glnH_1; ABC transporter glutamine-binding protein GlnH K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D A3L23_04130 artJ_2; putative ABC transporter arginine-binding protein ArtJ K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D A3L23_01776 artQ_1; Arginine transport system permease protein ArtQ K02029 ABC.PA.P; polar amino acid transport system permease protein D A3L23_02612 yecS_1; Inner membrane amino-acid ABC transporter permease protein YecS K02029 ABC.PA.P; polar amino acid transport system permease protein D A3L23_04131 yecS_2; Inner membrane amino-acid ABC transporter permease protein YecS K02029 ABC.PA.P; polar amino acid transport system permease protein D A3L23_01777 glnQ_1; Glutamine transport ATP-binding protein GlnQ K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D A3L23_02613 tcyC_1; L-cystine import ATP-binding protein TcyC K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D A3L23_02402 oppA; Oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein D A3L23_02403 dppB_2; Dipeptide transport system permease protein DppB K15581 oppB; oligopeptide transport system permease protein D A3L23_02404 oppC; Oligopeptide transport system permease protein OppC K15582 oppC; oligopeptide transport system permease protein D A3L23_02405 gsiA_3; Glutathione import ATP-binding protein GsiA K10823 oppF; oligopeptide transport system ATP-binding protein D A3L23_03343 lpqW; putative monoacyl phosphatidylinositol tetramannoside-binding protein LpqW K13889 gsiB; glutathione transport system substrate-binding protein D A3L23_03340 Putative peptide transport permease protein K13890 gsiC; glutathione transport system permease protein D A3L23_03341 Putative peptide transport permease protein K13891 gsiD; glutathione transport system permease protein D A3L23_03342 putative ABC transporter ATP-binding protein K13892 gsiA; glutathione transport system ATP-binding protein D A3L23_00787 ddpA; putative D,D-dipeptide-binding periplasmic protein DdpA K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D A3L23_01203 dppA_1; Periplasmic dipeptide transport protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D A3L23_01473 dppA_2; Periplasmic dipeptide transport protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D A3L23_01770 nikA_1; Nickel-binding periplasmic protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D A3L23_02619 nikA_2; Nickel-binding periplasmic protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D A3L23_04408 putative lipoprotein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D A3L23_00786 dppB_1; Dipeptide transport system permease protein DppB K02033 ABC.PE.P; peptide/nickel transport system permease protein D A3L23_01202 nikB_1; Nickel transport system permease protein NikB K02033 ABC.PE.P; peptide/nickel transport system permease protein D A3L23_01474 gsiC_1; Glutathione transport system permease protein GsiC K02033 ABC.PE.P; peptide/nickel transport system permease protein D A3L23_01769 nikB_2; Nickel transport system permease protein NikB K02033 ABC.PE.P; peptide/nickel transport system permease protein D A3L23_02620 gsiC_2; Glutathione transport system permease protein GsiC K02033 ABC.PE.P; peptide/nickel transport system permease protein D A3L23_00785 gsiD; Glutathione transport system permease protein GsiD K02034 ABC.PE.P1; peptide/nickel transport system permease protein D A3L23_01201 ddpC_1; putative D,D-dipeptide transport system permease protein DdpC K02034 ABC.PE.P1; peptide/nickel transport system permease protein D A3L23_01475 ddpC_2; putative D,D-dipeptide transport system permease protein DdpC K02034 ABC.PE.P1; peptide/nickel transport system permease protein D A3L23_02621 ddpC_3; putative D,D-dipeptide transport system permease protein DdpC K02034 ABC.PE.P1; peptide/nickel transport system permease protein D A3L23_00784 gsiA_1; Glutathione import ATP-binding protein GsiA K02031 ddpD; peptide/nickel transport system ATP-binding protein D A3L23_01200 oppD_1; Oligopeptide transport ATP-binding protein OppD K02031 ddpD; peptide/nickel transport system ATP-binding protein D A3L23_01476 oppD_2; Oligopeptide transport ATP-binding protein OppD K02031 ddpD; peptide/nickel transport system ATP-binding protein D A3L23_01772 ddpD; putative D,D-dipeptide transport ATP-binding protein DdpD K02031 ddpD; peptide/nickel transport system ATP-binding protein D A3L23_02622 gsiA_4; Glutathione import ATP-binding protein GsiA K02031 ddpD; peptide/nickel transport system ATP-binding protein D A3L23_01477 oppF_2; Oligopeptide transport ATP-binding protein OppF K02032 ddpF; peptide/nickel transport system ATP-binding protein D A3L23_04286 hmuT; Hemin-binding periplasmic protein HmuT K25132 hmuT; heme transport system substrate-binding protein D A3L23_04287 hmuU_4; Hemin transport system permease protein HmuU K25133 hmuU; heme transport system permease protein D A3L23_04288 hmuV_2; Hemin import ATP-binding protein HmuV K10834 hmuV; heme transport system ATP-binding protein [EC:7.6.2.5] D A3L23_00829 hypothetical protein K25287 desE; iron-desferrioxamine transport system substrate-binding protein D A3L23_00742 yfiY_1; putative siderophore-binding lipoprotein YfiY K25286 fagD; iron-siderophore transport system substrate-binding protein D A3L23_00824 yhfQ_2; Putative ABC transporter substrate-binding lipoprotein YhfQ K25286 fagD; iron-siderophore transport system substrate-binding protein D A3L23_01218 yfmC_1; Fe(3+)-citrate-binding protein YfmC K25286 fagD; iron-siderophore transport system substrate-binding protein D A3L23_01274 yfiY_2; putative siderophore-binding lipoprotein YfiY K25286 fagD; iron-siderophore transport system substrate-binding protein D A3L23_01554 yfmC_2; Fe(3+)-citrate-binding protein YfmC K25286 fagD; iron-siderophore transport system substrate-binding protein D A3L23_02463 yfmC_3; Fe(3+)-citrate-binding protein YfmC K25286 fagD; iron-siderophore transport system substrate-binding protein D A3L23_02728 yfiY_5; putative siderophore-binding lipoprotein YfiY K25286 fagD; iron-siderophore transport system substrate-binding protein D A3L23_03189 yfiY_7; putative siderophore-binding lipoprotein YfiY K25286 fagD; iron-siderophore transport system substrate-binding protein D A3L23_03801 yfmC_5; Fe(3+)-citrate-binding protein YfmC K25286 fagD; iron-siderophore transport system substrate-binding protein D A3L23_04464 yfmC_6; Fe(3+)-citrate-binding protein YfmC K25286 fagD; iron-siderophore transport system substrate-binding protein D A3L23_00819 fepD; Ferric enterobactin transport system permease protein FepD K23186 fepD; iron-siderophore transport system permease protein D A3L23_04196 yfiZ; putative siderophore transport system permease protein YfiZ K23186 fepD; iron-siderophore transport system permease protein D A3L23_00818 fepG; Ferric enterobactin transport system permease protein FepG K23187 fepG; iron-siderophore transport system permease protein D A3L23_04195 feuC; Iron-uptake system permease protein FeuC K23187 fepG; iron-siderophore transport system permease protein D A3L23_00817 yusV_1; putative siderophore transport system ATP-binding protein YusV K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-] D A3L23_04194 yusV_2; putative siderophore transport system ATP-binding protein YusV K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-] D A3L23_00149 yhfQ_1; Putative ABC transporter substrate-binding lipoprotein YhfQ K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D A3L23_00401 btuF_1; Vitamin B12-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D A3L23_01870 btuF_2; Vitamin B12-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D A3L23_01977 yfiY_3; putative siderophore-binding lipoprotein YfiY K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D A3L23_02175 yfiY_4; putative siderophore-binding lipoprotein YfiY K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D A3L23_02305 btuF_3; Vitamin B12-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D A3L23_02752 yfiY_6; putative siderophore-binding lipoprotein YfiY K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D A3L23_03632 btuF_4; Vitamin B12-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D A3L23_04775 yfiY_8; putative siderophore-binding lipoprotein YfiY K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D A3L23_00400 hmuU_1; Hemin transport system permease protein HmuU K02015 ABC.FEV.P; iron complex transport system permease protein D A3L23_01871 putative ABC transporter permease protein K02015 ABC.FEV.P; iron complex transport system permease protein D A3L23_02303 hmuU_2; Hemin transport system permease protein HmuU K02015 ABC.FEV.P; iron complex transport system permease protein D A3L23_03634 hmuU_3; Hemin transport system permease protein HmuU K02015 ABC.FEV.P; iron complex transport system permease protein D A3L23_00399 fhuC_1; Iron(3+)-hydroxamate import ATP-binding protein FhuC K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D A3L23_01872 fhuC_2; Iron(3+)-hydroxamate import ATP-binding protein FhuC K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D A3L23_02304 fhuC_3; Iron(3+)-hydroxamate import ATP-binding protein FhuC K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D A3L23_03633 hmuV_1; Hemin import ATP-binding protein HmuV K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D A3L23_04560 ylmA_1; putative ABC transporter ATP-binding protein YlmA K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D A3L23_04769 ylmA_2; putative ABC transporter ATP-binding protein YlmA K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D A3L23_03327 yfmC_4; Fe(3+)-citrate-binding protein YfmC K25034 btuF; cobalamin transport system substrate-binding protein D A3L23_04600 putative periplasmic iron-binding protein K11601 mntC; manganese transport system substrate-binding protein D A3L23_04602 mntB_2; Manganese transport system membrane protein MntB K11602 mntB; manganese transport system permease protein D A3L23_04601 fhuC_4; Iron(3+)-hydroxamate import ATP-binding protein FhuC K11603 mntA; manganese transport system ATP-binding protein [EC:7.2.2.5] D A3L23_02958 bioY; Biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component D A3L23_02962 bioN; Energy-coupling factor transporter transmembrane protein BioN K16783 bioN; biotin transport system permease protein D A3L23_02961 bioM; Biotin transport ATP-binding protein BioM K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-] D A3L23_00650 ecfT; Energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein D A3L23_00649 putative ABC transporter ATP-binding protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D A3L23_02544 ssaB; Manganese ABC transporter substrate-binding lipoprotein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein D A3L23_02860 putative periplasmic iron-binding protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein D A3L23_02542 znuB; High-affinity zinc uptake system membrane protein ZnuB K02075 ABC.ZM.P; zinc/manganese transport system permease protein D A3L23_02862 mntB_1; Manganese transport system membrane protein MntB K02075 ABC.ZM.P; zinc/manganese transport system permease protein D A3L23_02543 znuC_1; Zinc import ATP-binding protein ZnuC K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein D A3L23_02863 znuC_2; High-affinity zinc uptake system ATP-binding protein ZnuC K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein D A3L23_02064 hypothetical protein K09690 wzm; homopolymeric O-antigen transport system permease protein D A3L23_02063 tagH; Teichoic acids export ATP-binding protein TagH K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14] D A3L23_04461 drrB_3; Daunorubicin/doxorubicin resistance ABC transporter permease protein DrrB K25140 drrB; daunorubicin/doxorubicin transport system permease protein D A3L23_04460 drrA_11; Daunorubicin/doxorubicin resistance ATP-binding protein DrrA K25141 drrA; daunorubicin/doxorubicin transport system ATP-binding protein D A3L23_01504 hypothetical protein K25149 narB; polyether ionophore transport system permease protein D A3L23_01505 drrA_4; Daunorubicin/doxorubicin resistance ATP-binding protein DrrA K25150 narA; polyether ionophore transport system ATP-binding protein D A3L23_04811 ftsX; Cell division protein FtsX K09811 ftsX; cell division transport system permease protein D A3L23_04812 ftsE; Cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D A3L23_00264 drrB_1; Doxorubicin resistance ABC transporter permease protein DrrB K01992 ABC-2.P; ABC-2 type transport system permease protein D A3L23_00265 drrC; putative doxorubicin resistance ABC transporter permease protein DrrC K01992 ABC-2.P; ABC-2 type transport system permease protein D A3L23_00681 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D A3L23_00713 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D A3L23_01489 ybhR_1; Inner membrane transport permease YbhR K01992 ABC-2.P; ABC-2 type transport system permease protein D A3L23_01685 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D A3L23_02424 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D A3L23_02657 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D A3L23_03001 drrB_2; Daunorubicin/doxorubicin resistance ABC transporter permease protein DrrB K01992 ABC-2.P; ABC-2 type transport system permease protein D A3L23_03148 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D A3L23_03807 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D A3L23_04056 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D A3L23_04081 ybhR_2; Inner membrane transport permease YbhR K01992 ABC-2.P; ABC-2 type transport system permease protein D A3L23_04337 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D A3L23_00263 drrA_1; Doxorubicin resistance ATP-binding protein DrrA K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D A3L23_00680 rbbA; Ribosome-associated ATPase K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D A3L23_00712 drrA_2; Daunorubicin/doxorubicin resistance ATP-binding protein DrrA K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D A3L23_01148 ettA_2; Energy-dependent translational throttle protein EttA K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D A3L23_01490 drrA_3; Daunorubicin/doxorubicin resistance ATP-binding protein DrrA K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D A3L23_01686 drrA_5; Daunorubicin/doxorubicin resistance ATP-binding protein DrrA K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D A3L23_02425 drrA_6; Daunorubicin/doxorubicin resistance ATP-binding protein DrrA K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D A3L23_02656 natA_1; ABC transporter ATP-binding protein NatA K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D A3L23_03000 drrA_7; Daunorubicin/doxorubicin resistance ATP-binding protein DrrA K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D A3L23_03149 natA_2; ABC transporter ATP-binding protein NatA K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D A3L23_03806 drrA_8; Daunorubicin/doxorubicin resistance ATP-binding protein DrrA K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D A3L23_03987 yxlF; putative ABC transporter ATP-binding protein YxlF K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D A3L23_04057 drrA_9; Daunorubicin/doxorubicin resistance ATP-binding protein DrrA K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D A3L23_04082 ybhF; putative ABC transporter ATP-binding protein YbhF K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D A3L23_04336 drrA_10; Daunorubicin/doxorubicin resistance ATP-binding protein DrrA K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D A3L23_04642 ytrB; ABC transporter ATP-binding protein YtrB K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D A3L23_00517 yknZ; putative ABC transporter permease YknZ K02004 ABC.CD.P; putative ABC transport system permease protein D A3L23_00643 ytrF_1; ABC transporter permease YtrF K02004 ABC.CD.P; putative ABC transport system permease protein D A3L23_01586 ytrF_2; ABC transporter permease YtrF K02004 ABC.CD.P; putative ABC transport system permease protein D A3L23_00516 yxdL; ABC transporter ATP-binding protein YxdL K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D A3L23_00642 lolD; Lipoprotein-releasing system ATP-binding protein LolD K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D A3L23_01585 bceA; Bacitracin export ATP-binding protein BceA K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D A3L23_04331 sufC; Vegetative protein 296 K09013 sufC; Fe-S cluster assembly ATP-binding protein D A3L23_01794 hypothetical protein K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7 D A3L23_04611 dinF; DNA-damage-inducible protein F K26937 dinF; MATE family, multidrug efflux pump D A3L23_00409 kgtP_1; Alpha-ketoglutarate permease K03761 kgtP; MFS transporter, MHS family, alpha-ketoglutarate permease D A3L23_00428 kgtP_2; Alpha-ketoglutarate permease K03761 kgtP; MFS transporter, MHS family, alpha-ketoglutarate permease D A3L23_00710 kgtP_3; Alpha-ketoglutarate permease K03761 kgtP; MFS transporter, MHS family, alpha-ketoglutarate permease D A3L23_03512 kgtP_4; Alpha-ketoglutarate permease K03761 kgtP; MFS transporter, MHS family, alpha-ketoglutarate permease D A3L23_01617 proP_2; Proline/betaine transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter D A3L23_03754 proP_7; Proline/betaine transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter D A3L23_04300 proP_8; Proline/betaine transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter D A3L23_01337 proP_1; Proline/betaine transporter K08173 ydfJ; MFS transporter, MHS family, metabolite:H+ symporter D A3L23_04455 yycB_1; putative transporter YycB K03449 MFS.CP; MFS transporter, CP family, cyanate transporter D A3L23_04852 yycB_2; putative transporter YycB K03449 MFS.CP; MFS transporter, CP family, cyanate transporter D A3L23_03314 naiP; Putative niacin/nicotinamide transporter NaiP K28762 niaP; MFS transporter, niacin uptake porter D A3L23_03602 glpT; Glycerol-3-phosphate transporter K02445 glpT; MFS transporter, OPA family, glycerol-3-phosphate transporter D A3L23_04851 narK; Nitrate/nitrite transporter NarK K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D A3L23_01581 bcr; Bicyclomycin resistance protein K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D A3L23_01275 mdtH_1; Multidrug resistance protein MdtH K08162 mdtH; MFS transporter, DHA1 family, multidrug resistance protein D A3L23_01768 mdtH_2; Multidrug resistance protein MdtH K08162 mdtH; MFS transporter, DHA1 family, multidrug resistance protein D A3L23_00150 ydhP; Inner membrane transport protein YdhP K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein D A3L23_00011 hsrA_1; putative transport protein HsrA K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein D A3L23_01853 qacA_3; Antiseptic resistance protein K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein D A3L23_03975 qacA_7; Antiseptic resistance protein K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein D A3L23_00324 emrY; putative multidrug resistance protein EmrY K18926 lmrB; MFS transporter, DHA2 family, lincomycin resistance protein D A3L23_02568 yfmO; Multidrug efflux protein YfmO K08221 yitG; MFS transporter, ACDE family, multidrug resistance protein D A3L23_01858 ynfM_2; Inner membrane transport protein YnfM K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein D A3L23_03672 hypothetical protein K06902 UMF1; MFS transporter, UMF1 family D A3L23_04513 ptsI; Phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D A3L23_04517 ptsH; Phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr D A3L23_03243 crr; Glucose-specific phosphotransferase enzyme IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D A3L23_03245 ptsG; PTS system glucose-specific EIICB component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193] D A3L23_03244 glcB_1; PTS system glucoside-specific EIICBA component K02803 nagEb; N-acetylglucosamine PTS system EIIB component [EC:2.7.1.193] D A3L23_04516 fruA; PTS system fructose-specific EIIABC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D A3L23_04585 aqpZ; Aquaporin Z K06188 aqpZ; aquaporin D A3L23_02207 glpF; Glycerol uptake facilitator protein K02440 glpF; glycerol uptake facilitator D A3L23_04839 kch; Voltage-gated potassium channel Kch K10716 kch; voltage-gated potassium channel D A3L23_00670 amt_1; Ammonia channel K03320 amt; ammonium transporter, Amt family D A3L23_04689 amt_2; Ammonia channel K03320 amt; ammonium transporter, Amt family D A3L23_04317 hypothetical protein K07114 yfbK; Ca-activated chloride channel homolog D A3L23_00571 mscL; Large-conductance mechanosensitive channel K03282 mscL; large conductance mechanosensitive channel D A3L23_03695 ykuT_1; putative MscS family protein YkuT K22044 ybiO; moderate conductance mechanosensitive channel D A3L23_04814 ykuT_2; putative MscS family protein YkuT K22044 ybiO; moderate conductance mechanosensitive channel D A3L23_04627 Magnesium transporter MgtE K06213 mgtE; magnesium transporter D A3L23_00582 corA_1; Magnesium transport protein CorA K03284 corA; magnesium transporter D A3L23_03132 corA_2; Magnesium transport protein CorA K03284 corA; magnesium transporter D A3L23_01118 crcB_1; Putative fluoride ion transporter CrcB K06199 crcB; fluoride exporter D A3L23_01119 crcB_2; Putative fluoride ion transporter CrcB K06199 crcB; fluoride exporter D A3L23_03742 crcB1; Putative fluoride ion transporter CrcB 1 K06199 crcB; fluoride exporter D A3L23_03743 crcB_3; Putative fluoride ion transporter CrcB K06199 crcB; fluoride exporter D A3L23_00875 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D A3L23_00876 tlyC_1; Hemolysin C K03699 tlyC; magnesium and cobalt exporter, CNNM family D A3L23_03795 corC_1; Magnesium and cobalt efflux protein CorC K03699 tlyC; magnesium and cobalt exporter, CNNM family D A3L23_04182 tlyC_2; Hemolysin C K03699 tlyC; magnesium and cobalt exporter, CNNM family D A3L23_04183 corC_2; Magnesium and cobalt efflux protein CorC K03699 tlyC; magnesium and cobalt exporter, CNNM family D A3L23_03852 gabP; GABA permease K11735 gabP; GABA permease D A3L23_02695 ansP1; L-asparagine permease 1 K11738 ansP; L-asparagine permease D A3L23_02708 ansP2; L-asparagine permease 2 K11738 ansP; L-asparagine permease D A3L23_01644 yhdG_6; putative amino acid permease YhdG K28029 UGA4; amino acid or GABA permease D A3L23_04565 puuP_5; Putrescine importer PuuP K28029 UGA4; amino acid or GABA permease D A3L23_00283 yhdG_2; putative amino acid permease YhdG K16238 eat; ethanolamine permease D A3L23_02583 czcD_1; Metal cation efflux system protein CzcD K16264 czcD; cobalt-zinc-cadmium efflux system protein D A3L23_05113 czcD_2; Metal cation efflux system protein CzcD K16264 czcD; cobalt-zinc-cadmium efflux system protein D A3L23_00168 mmpL3_1; Putative membrane protein mmpL3 K20470 mmpL3; trehalose monomycolate/heme transporter D A3L23_01409 mmpL3_2; Putative membrane protein mmpL3 K20470 mmpL3; trehalose monomycolate/heme transporter D A3L23_02928 mmpL3_3; Putative membrane protein mmpL3 K20470 mmpL3; trehalose monomycolate/heme transporter D A3L23_00854 sugE; Quaternary ammonium compound-resistance protein SugE K11741 sugE; quaternary ammonium compound-resistance protein SugE D A3L23_02357 eamA; putative amino-acid metabolite efflux pump K15268 eamA; O-acetylserine/cysteine efflux transporter D A3L23_04481 rhtA; Threonine/homoserine exporter RhtA K11939 rhtA; inner membrane transporter RhtA D A3L23_01492 ygbN; Inner membrane permease YgbN K03299 TC.GNTP; gluconate:H+ symporter, GntP family D A3L23_03554 gntU; Low-affinity gluconate transporter K03299 TC.GNTP; gluconate:H+ symporter, GntP family D A3L23_02693 opuD; Glycine betaine transporter OpuD K02168 betT; choline/glycine/proline betaine transport protein D A3L23_00654 actP_1; Cation/acetate symporter ActP K14393 actP; cation/acetate symporter D A3L23_00398 dctA_1; Aerobic C4-dicarboxylate transport protein K11103 dctA; aerobic C4-dicarboxylate transport protein D A3L23_00806 dctA_2; Aerobic C4-dicarboxylate transport protein K11103 dctA; aerobic C4-dicarboxylate transport protein D A3L23_01422 nhaA_1; Na(+)/H(+) antiporter NhaA K03313 nhaA; Na+:H+ antiporter, NhaA family D A3L23_00661 nhaK_1; Sodium, potassium, lithium and rubidium/H(+) antiporter K24163 nhaK; monovalent cation/hydrogen antiporter D A3L23_01688 nhaK_2; Sodium, potassium, lithium and rubidium/H(+) antiporter K24163 nhaK; monovalent cation/hydrogen antiporter D A3L23_02337 khtT; K(+)/H(+) antiporter subunit KhtT K07228 khtT; K+:H+ antiporter subunit KhtT D A3L23_02336 yhaU; K(+)/H(+) antiporter YhaU K26732 khtU; K+:H+ antiporter subunit KhtU D A3L23_01447 ktrB; Ktr system potassium uptake protein B K03498 trkH; trk/ktr system potassium uptake protein D A3L23_01446 ktrA; Ktr system potassium uptake protein A K03499 trkA; trk/ktr system potassium uptake protein D A3L23_04467 trkA_1; Trk system potassium uptake protein TrkA K03499 trkA; trk/ktr system potassium uptake protein D A3L23_04468 trkA_2; Trk system potassium uptake protein TrkA K03499 trkA; trk/ktr system potassium uptake protein D A3L23_03473 codB; Cytosine permease K10974 codB; cytosine permease D A3L23_00085 uacT_1; Uric acid transporter UacT K24206 uacT; uric acid transporter D A3L23_02777 uacT_2; Uric acid transporter UacT K24206 uacT; uric acid transporter D A3L23_00718 pbuG; Guanine/hypoxanthine permease PbuG K06901 pbuG; adenine/guanine/hypoxanthine permease D A3L23_04217 ydcO; Inner membrane protein YdcO K05782 benE; benzoate membrane transport protein D A3L23_02163 hoxN; High-affinity nickel transport protein K07241 hoxN; nickel/cobalt transporter (NiCoT) family protein D A3L23_01466 dauA_1; C4-dicarboxylic acid transporter DauA K03321 TC.SULP; sulfate permease, SulP family D A3L23_01469 dauA_2; C4-dicarboxylic acid transporter DauA K03321 TC.SULP; sulfate permease, SulP family D A3L23_01481 dauA_3; C4-dicarboxylic acid transporter DauA K03321 TC.SULP; sulfate permease, SulP family D A3L23_05124 mntH_2; Divalent metal cation transporter MntH K03322 mntH; manganese transport protein D A3L23_03921 hypothetical protein K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D A3L23_03865 arsB; Arsenical pump membrane protein K03893 arsB; arsenical pump membrane protein D A3L23_01425 acr3; Arsenical-resistance protein Acr3 K03325 ACR3; arsenite transporter D A3L23_02457 hypothetical protein K03325 ACR3; arsenite transporter D A3L23_05133 hmrR; HTH-type transcriptional regulator HmrR K03325 ACR3; arsenite transporter D A3L23_02676 mrpA; Na(+)/H(+) antiporter subunit A K05565 mnhA; multicomponent Na+:H+ antiporter subunit A D A3L23_02675 mrpD; Na(+)/H(+) antiporter subunit D K05568 mnhD; multicomponent Na+:H+ antiporter subunit D D A3L23_02673 mnhE1; Na(+)/H(+) antiporter subunit E1 K05569 mnhE; multicomponent Na+:H+ antiporter subunit E D A3L23_02672 hypothetical protein K05570 mnhF; multicomponent Na+:H+ antiporter subunit F D A3L23_02671 mrpG; Na(+)/H(+) antiporter subunit G K05571 mnhG; multicomponent Na+:H+ antiporter subunit G D A3L23_01804 mviN; putative peptidoglycan biosynthesis protein MviN K03980 murJ; putative peptidoglycan lipid II flippase D A3L23_00596 hypothetical protein K13936 mdcF; malonate transporter and related proteins D A3L23_01894 argO; Arginine exporter protein ArgO K06895 lysE; L-lysine exporter family protein LysE/ArgO D A3L23_04004 rhtB_3; Homoserine/homoserine lactone efflux protein K05834 rhtB; homoserine/homoserine lactone efflux protein D A3L23_01915 ygaZ; Inner membrane protein YgaZ K26605 azlC; branched chain amino acid efflux pump D A3L23_01914 hypothetical protein K26606 azlD; branched chain amino acid efflux pump D A3L23_00880 hypothetical protein K07793 tctA; putative tricarboxylic transport membrane protein D A3L23_01307 hypothetical protein K07793 tctA; putative tricarboxylic transport membrane protein D A3L23_00879 hypothetical protein K07794 tctB; putative tricarboxylic transport membrane protein D A3L23_00878 hypothetical protein K07795 tctC; putative tricarboxylic transport membrane protein D A3L23_01417 tqsA; AI-2 transport protein TqsA K20469 K20469; putative heme transporter D A3L23_03027 hypothetical protein K20469 K20469; putative heme transporter D A3L23_02298 hypothetical protein K09125 yhhQ; queuosine precursor transporter D A3L23_00588 hypothetical protein K22736 VIT; vacuolar iron transporter family protein D A3L23_01845 rodA_1; putative FtsW-like protein K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28] D A3L23_03950 ftsW; Putative lipid II flippase FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28] D A3L23_01975 hypothetical protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family D A3L23_00500 efeU; Ferrous iron permease EfeU K07243 FTR; high-affinity iron transporter D A3L23_00501 efeO; Iron uptake system component EfeO K07224 efeO; iron uptake system component EfeO D A3L23_00502 efeN; putative deferrochelatase/peroxidase EfeN K16301 efeB; deferrochelatase/peroxidase EfeB [EC:1.11.1.-] D A3L23_03030 cstA; Carbon starvation protein A K06200 cstA; carbon starvation protein D A3L23_04123 tolB; Protein TolB K03641 tolB; TolB protein D A3L23_02836 hypothetical protein K06196 ccdA; cytochrome c-type biogenesis protein D A3L23_05123 hypothetical protein K06196 ccdA; cytochrome c-type biogenesis protein D A3L23_04442 dorA; Dimethyl sulfoxide/trimethylamine N-oxide reductase K08351 bisC; biotin/methionine sulfoxide reductase [EC:1.-.-.-] D A3L23_01232 ywqD_1; Tyrosine-protein kinase YwqD K25588 K25588; tyrosine-protein kinase [EC:2.7.10.3] D A3L23_01238 ywqD_2; Tyrosine-protein kinase YwqD K25588 K25588; tyrosine-protein kinase [EC:2.7.10.3] D A3L23_01724 hypothetical protein K27044 pacL1; chaperone-like protein D A3L23_00529 pnuC; Nicotinamide riboside transporter PnuC K03811 pnuC; nicotinamide mononucleotide transporter D A3L23_01419 hypothetical protein K20468 K20468; putative heme transporter D A3L23_00087 hiuH; 5-hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17] D A3L23_02643 yidH; Inner membrane protein YidH K00389 yidH; inner membrane protein YidH D A3L23_01966 hypothetical protein K07245 pcoD; copper resistance protein D D A3L23_01967 hypothetical protein K07156 copC; copper resistance protein C D A3L23_05106 pcoC; Copper resistance protein C K07156 copC; copper resistance protein C C 02044 Secretion system [BR:rfa02044] D A3L23_02409 Putative conjugal transfer protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D A3L23_04884 Putative conjugal transfer protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D A3L23_02410 hypothetical protein K12510 tadB; tight adherence protein B D A3L23_04885 hypothetical protein K12510 tadB; tight adherence protein B D A3L23_02411 hypothetical protein K12511 tadC; tight adherence protein C D A3L23_04886 hypothetical protein K12511 tadC; tight adherence protein C D A3L23_04887 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA D A3L23_03958 hypothetical protein K02221 yggT; YggT family protein D A3L23_03765 comEA; ComE operon protein 1 K02237 comEA; competence protein ComEA D A3L23_03766 hypothetical protein K02238 comEC; competence protein ComEC D A3L23_00218 eccB3; ESX-3 secretion system protein eccB3 K27085 eccB; ESX secretion system ATPase EccB D A3L23_00214 eccC3; ESX-3 secretion system protein EccC3 K27086 eccC; ESX secretion system protein EccC D A3L23_00216 eccD5; ESX-5 secretion system protein eccD5 K27087 eccD; ESX secretion system protein EccD D A3L23_00219 eccE1; ESX-1 secretion system protein EccE1 K27088 eccE; ESX secretion system protein EccE D A3L23_00217 Thermophilic serine proteinase K14743 mycP; membrane-anchored mycosin MYCP [EC:3.4.21.-] D A3L23_01745 hypothetical protein K27091 espG; ESX secretion-associated protein EspG D A3L23_01994 hypothetical protein K27091 espG; ESX secretion-associated protein EspG D A3L23_00211 hypothetical protein K14956 esx; ESAT-6 family protein D A3L23_00212 hypothetical protein K14956 esx; ESAT-6 family protein D A3L23_00031 secA_1; Protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D A3L23_03989 secA_2; Protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D A3L23_04410 hypothetical protein K03072 secD; preprotein translocase subunit SecD D A3L23_02898 secE; Protein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D A3L23_04409 hypothetical protein K03074 secF; preprotein translocase subunit SecF D A3L23_04348 secG; putative protein-export membrane protein SecG K03075 secG; preprotein translocase subunit SecG D A3L23_00232 secY; Protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D A3L23_04685 ffh; Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D A3L23_04690 ftsY; Signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor D A3L23_04411 hypothetical protein K03210 yajC; preprotein translocase subunit YajC D A3L23_00142 yidC_1; Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D A3L23_01816 yidC_2; Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D A3L23_01220 tatA_1; Sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA D A3L23_04254 tatA_2; Sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA D A3L23_01222 tatB_1; Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB D A3L23_03115 tatB_2; Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB D A3L23_01221 tatC_1; Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC D A3L23_04253 tatC_2; Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC C 02042 Bacterial toxins [BR:rfa02042] D A3L23_00875 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D A3L23_00876 tlyC_1; Hemolysin C K03699 tlyC; magnesium and cobalt exporter, CNNM family D A3L23_03795 corC_1; Magnesium and cobalt efflux protein CorC K03699 tlyC; magnesium and cobalt exporter, CNNM family D A3L23_04182 tlyC_2; Hemolysin C K03699 tlyC; magnesium and cobalt exporter, CNNM family D A3L23_04183 corC_2; Magnesium and cobalt efflux protein CorC K03699 tlyC; magnesium and cobalt exporter, CNNM family D A3L23_03007 hypothetical protein K11068 hlyIII; hemolysin III C 02022 Two-component system [BR:rfa02022] D A3L23_02794 senX3; Signal-transduction histidine kinase senX3 K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3] D A3L23_02795 regX3_2; Sensory transduction protein regX3 K07776 regX3; two-component system, OmpR family, response regulator RegX3 D A3L23_01661 kdpD; Sensor protein KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D A3L23_01660 kdpE_2; Transcriptional regulatory protein KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D A3L23_00162 mprB_1; Signal transduction histidine-protein kinase/phosphatase MprB K07653 mprB; two-component system, OmpR family, sensor histidine kinase MprB [EC:2.7.13.3] D A3L23_00577 mprB_2; Signal transduction histidine-protein kinase/phosphatase MprB K07653 mprB; two-component system, OmpR family, sensor histidine kinase MprB [EC:2.7.13.3] D A3L23_00578 mprA_1; Response regulator MprA K07669 mprA; two-component system, OmpR family, response regulator MprA D A3L23_00035 mtrB; Sensor histidine kinase MtrB K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3] D A3L23_00036 mtrA; DNA-binding response regulator MtrA K07670 mtrA; two-component system, OmpR family, response regulator MtrA D A3L23_00689 prrB; Sensor-type histidine kinase PrrB K07655 prrB; two-component system, OmpR family, sensor histidine kinase PrrB [EC:2.7.13.3] D A3L23_00688 prrA; Transcriptional regulatory protein PrrA K07671 prrA; two-component system, OmpR family, response regulator PrrA D A3L23_00275 arlS_2; Signal transduction histidine-protein kinase ArlS K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D A3L23_00850 tcrY_1; putative sensor histidine kinase TcrY K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D A3L23_02007 tcrY_2; putative sensor histidine kinase TcrY K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D A3L23_00274 copR; Transcriptional activator protein CopR K02483 K02483; two-component system, OmpR family, response regulator D A3L23_00851 tcrX; putative transcriptional regulatory protein TcrX K02483 K02483; two-component system, OmpR family, response regulator D A3L23_00714 desK_2; Sensor histidine kinase DesK K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3] D A3L23_03808 desK_5; Sensor histidine kinase DesK K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3] D A3L23_00715 desR_1; Transcriptional regulatory protein DesR K07693 desR; two-component system, NarL family, response regulator DesR D A3L23_03809 desR_3; Transcriptional regulatory protein DesR K07693 desR; two-component system, NarL family, response regulator DesR D A3L23_01145 devS; Redox sensor histidine kinase response regulator DevS K07682 devS; two-component system, NarL family, sensor histidine kinase DevS [EC:2.7.13.3] D A3L23_01146 devR; Transcriptional regulatory protein DevR (DosR) K07695 devR; two-component system, NarL family, response regulator DevR D A3L23_00846 dcuS_2; Sensor histidine kinase DcuS K02476 K02476; two-component system, CitB family, sensor kinase [EC:2.7.13.3] D A3L23_00659 yehU; Sensor histidine kinase YehU K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3] D A3L23_00658 lytR_2; Sensory transduction protein LytR K02477 K02477; two-component system, LytTR family, response regulator D A3L23_00017 pdtaS; putative sensor histidine kinase pdtaS K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3] D A3L23_04038 pdtaR; putative transcriptional regulatory protein pdtaR K22010 pdtaR; two-component system, response regulator PdtaR C 02035 Bacterial motility proteins [BR:rfa02035] D A3L23_03173 tcyB; L-cystine transport system permease protein TcyB K02424 tcyA; L-cystine transport system substrate-binding protein D A3L23_04887 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA D A3L23_02409 Putative conjugal transfer protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D A3L23_04884 Putative conjugal transfer protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:rfa04812] D A3L23_03954 ftsZ; Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D A3L23_00010 soj_1; Sporulation initiation inhibitor protein Soj K03496 parA; chromosome partitioning protein D A3L23_01812 soj_2; Sporulation initiation inhibitor protein Soj K03496 parA; chromosome partitioning protein D A3L23_03360 soj_3; Sporulation initiation inhibitor protein Soj K03496 parA; chromosome partitioning protein D A3L23_04099 soj_4; Sporulation initiation inhibitor protein Soj K03496 parA; chromosome partitioning protein D A3L23_04862 soj_5; Sporulation initiation inhibitor protein Soj K03496 parA; chromosome partitioning protein D A3L23_04879 parA; Chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein D A3L23_01811 parB; putative chromosome-partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D A3L23_05164 hypothetical protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:rfa04147] D A3L23_00665 htpG; Chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG D A3L23_00498 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D A3L23_04351 gapA; Glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D A3L23_04350 pgk; Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D A3L23_04029 pyk; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D A3L23_01836 ppiA; Peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D A3L23_00192 groL2; 60 kDa chaperonin 2 K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D A3L23_02103 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D A3L23_02696 groL1; 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D A3L23_01070 dnaK_1; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D A3L23_00618 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D A3L23_00185 putative oxidoreductase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D A3L23_00186 guaB; Inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D A3L23_02992 tuf; Elongation factor Tu K02358 tuf; elongation factor Tu D A3L23_00830 putative HIT-like protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D A3L23_03234 putative HIT-like protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D A3L23_01794 hypothetical protein K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7 D A3L23_00410 lcfB_1; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D A3L23_02124 lcfB_3; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D A3L23_03167 Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D A3L23_03918 Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D A3L23_00314 fadA_1; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A3L23_01384 fadI; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A3L23_02150 hypothetical protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A3L23_02333 fadA_2; Putative acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A3L23_02960 putative acetyl-CoA acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A3L23_03568 putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A3L23_03716 pcaF; Beta-ketoadipyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A3L23_00038 ahcY; Adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D A3L23_00231 adk; Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D A3L23_04407 apt; Adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D A3L23_04078 argH_1; Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D A3L23_04931 argH_2; Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D A3L23_02705 argG_1; Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D A3L23_04077 argG_2; Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D A3L23_04932 argG_3; Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D A3L23_05009 ddc; L-2,4-diaminobutyrate decarboxylase K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105] D A3L23_03228 D-hydantoinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D A3L23_04125 D-hydantoinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D A3L23_02250 hypothetical protein K01555 FAH; fumarylacetoacetase [EC:3.7.1.2] D A3L23_01924 galK; Galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D A3L23_03572 glgB; 1,4-alpha-glucan branching enzyme GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D A3L23_02208 glpK; Glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D A3L23_00239 gms; Glutamate--methylamine ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D A3L23_00882 glnA_1; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D A3L23_03876 glnA_2; putative glutamine synthetase 2 K01915 glnA; glutamine synthetase [EC:6.3.1.2] D A3L23_03882 glnA_3; Glutamine synthetase 1 K01915 glnA; glutamine synthetase [EC:6.3.1.2] D A3L23_02814 hemB; Delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D A3L23_02248 hpd; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D A3L23_03064 Putative pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D A3L23_04732 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D A3L23_00602 purH; Bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D A3L23_01025 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D A3L23_02243 pdhD; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D A3L23_02724 lpdC; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D A3L23_04758 etfA; Electron transfer flavoprotein subunit alpha K03522 fixB; electron transfer flavoprotein alpha subunit D A3L23_02715 zwf; Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D A3L23_04344 zwf2; Glucose-6-phosphate 1-dehydrogenase 2 K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D A3L23_04552 zwf1_2; Glucose-6-phosphate 1-dehydrogenase 1 K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D A3L23_04349 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D A3L23_02793 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D A3L23_00868 blc; Outer membrane lipoprotein Blc K03098 APOD; apolipoprotein D and lipocalin family protein C 02048 Prokaryotic defense system [BR:rfa02048] D A3L23_01965 hhaIM; Modification methylase HhaI K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D A3L23_02267 ydiP; putative BsuMI modification methylase subunit YdiP K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D A3L23_05035 hypothetical protein K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D A3L23_04903 relE; Toxin RelE K06218 relE; mRNA interferase RelE/StbE D A3L23_04902 relB; Antitoxin RelB K28297 relB_F; antitoxin RelB/F D A3L23_03954 ftsZ; Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D A3L23_02300 gluQ; Glutamyl-Q tRNA(Asp) synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D A3L23_04728 gltX; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D A3L23_04755 iscS; IscS-like cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules C 01504 Antimicrobial resistance genes [BR:rfa01504] D A3L23_01853 qacA_3; Antiseptic resistance protein K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein D A3L23_03975 qacA_7; Antiseptic resistance protein K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein D A3L23_04190 htpX_2; Protease HtpX K02172 blaR1; bla regulator protein blaR1 D A3L23_04191 blaI_1; Transcriptional regulator BlaI K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D A3L23_02154 blaF; Beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6] D A3L23_04193 mprF; Phosphatidylglycerol lysyltransferase K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3] D A3L23_01468 mta_1; HTH-type transcriptional activator mta K19591 cueR; MerR family transcriptional regulator, copper efflux regulator C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins [BR:rfa00536] D A3L23_02758 hbhA; Heparin-binding hemagglutinin K16645 hbhA; heparin binding hemagglutinin HbhA C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:rfa03100] D A3L23_00563 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D A3L23_01831 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D A3L23_04797 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D A3L23_00645 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D A3L23_02100 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D A3L23_03263 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D A3L23_03680 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D A3L23_03814 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D A3L23_00753 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D A3L23_04429 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D A3L23_00510 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D A3L23_04725 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D A3L23_00754 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D A3L23_04724 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D A3L23_01355 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D A3L23_03705 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D A3L23_04428 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D A3L23_03666 tRNA-His K14226 tRNA-His; tRNA His D A3L23_01830 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D A3L23_00493 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D A3L23_01849 tRNA-Ser K14228 tRNA-Leu; tRNA Leu D A3L23_03588 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D A3L23_04037 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D A3L23_04295 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D A3L23_00757 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D A3L23_03598 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D A3L23_01590 tRNA-Met K14230 tRNA-Met; tRNA Met D A3L23_02893 tRNA-Met K14230 tRNA-Met; tRNA Met D A3L23_03827 tRNA-Met K14230 tRNA-Met; tRNA Met D A3L23_04826 tRNA-Met K14230 tRNA-Met; tRNA Met D A3L23_00752 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D A3L23_02380 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D A3L23_03706 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D A3L23_04105 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D A3L23_02070 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D A3L23_02099 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D A3L23_02276 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D A3L23_02322 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D A3L23_01049 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D A3L23_02421 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D A3L23_02892 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D A3L23_02897 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D A3L23_02891 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D A3L23_03840 tRNA-Val K14237 tRNA-Val; tRNA Val D A3L23_04427 tRNA-Val K14237 tRNA-Val; tRNA Val D A3L23_04430 tRNA-Val K14237 tRNA-Val; tRNA Val D A3L23_03207 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D A3L23_03292 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D A3L23_03561 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D A3L23_04085 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D A3L23_03208 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D A3L23_03293 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D A3L23_03562 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D A3L23_04086 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D A3L23_03209 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D A3L23_03294 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D A3L23_03563 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D A3L23_04087 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D A3L23_04807 ssrA; transfer-messenger RNA, SsrA K15035 ssrA; transfer-messenger RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D A3L23_03650 idnD; L-idonate 5-dehydrogenase (NAD(P)(+)) K00098 idnD; L-idonate 5-dehydrogenase [EC:1.1.1.264] D A3L23_01571 S-(hydroxymethyl)mycothiol dehydrogenase K00153 E1.1.1.306; S-(hydroxymethyl)mycothiol dehydrogenase [EC:1.1.1.306] D A3L23_02133 S-(hydroxymethyl)mycothiol dehydrogenase K00153 E1.1.1.306; S-(hydroxymethyl)mycothiol dehydrogenase [EC:1.1.1.306] D A3L23_04496 S-(hydroxymethyl)mycothiol dehydrogenase K00153 E1.1.1.306; S-(hydroxymethyl)mycothiol dehydrogenase [EC:1.1.1.306] D A3L23_02041 dprE2; NAD-dependent decaprenylphosphoryl-D-2-keto erythropentose reductase K16652 dprE2; decaprenylphospho-beta-D-erythro-pentofuranosid-2-ulose 2-reductase [EC:1.1.1.333] D A3L23_00674 putative oxidoreductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346] D A3L23_02451 putative oxidoreductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346] D A3L23_01207 pdxA2; 4-hydroxythreonine-4-phosphate dehydrogenase 2 K22024 pdxA2; 4-phospho-D-threonate 3-dehydrogenase / 4-phospho-D-erythronate 3-dehydrogenase [EC:1.1.1.408 1.1.1.409] D A3L23_02068 gpr_1; L-glyceraldehyde 3-phosphate reductase K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-] D A3L23_01016 acoA; Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha K21416 acoA; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [EC:1.1.1.-] D A3L23_01015 pdhB; Pyruvate dehydrogenase E1 component subunit beta K21417 acoB; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta [EC:1.1.1.-] D A3L23_03162 L-gulono-1,4-lactone dehydrogenase K05888 K05888; L-gulono-1,4-lactone dehydrogenase [EC:1.1.2.-] D A3L23_02822 yliI; Soluble aldose sugar dehydrogenase YliI K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-] D A3L23_02644 fgd_2; F420-dependent glucose-6-phosphate dehydrogenase K15510 fgd1; coenzyme F420-dependent glucose-6-phosphate dehydrogenase [EC:1.1.98.2] D A3L23_02042 dprE1_1; FAD-dependent decaprenylphosphoryl-beta-D-ribofuranose 2-oxidase K16653 dprE1; decaprenylphospho-beta-D-ribofuranose 2-oxidase [EC:1.1.98.3] D A3L23_03972 Putative nitroreductase K00540 fqr; F420H(2)-dependent quinone reductase [EC:1.1.98.-] D A3L23_03052 gno; Gluconate 5-dehydrogenase K11168 DHRS12; dehydrogenase/reductase SDR family member 12 [EC:1.1.-.-] D A3L23_03317 cdhC_1; Caffeine dehydrogenase subunit gamma K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3] D A3L23_03483 cdhC_2; Caffeine dehydrogenase subunit gamma K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3] D A3L23_03315 kdhA_1; 6-hydroxypseudooxynicotine dehydrogenase complex subunit alpha K03519 coxM; aerobic carbon-monoxide dehydrogenase medium subunit [EC:1.2.5.3] D A3L23_03484 kdhA_2; 6-hydroxypseudooxynicotine dehydrogenase complex subunit alpha K03519 coxM; aerobic carbon-monoxide dehydrogenase medium subunit [EC:1.2.5.3] D A3L23_03316 cdhA_1; Caffeine dehydrogenase subunit alpha K03520 coxL; aerobic carbon-monoxide dehydrogenase large subunit [EC:1.2.5.3] D A3L23_03482 cdhA_2; Caffeine dehydrogenase subunit alpha K03520 coxL; aerobic carbon-monoxide dehydrogenase large subunit [EC:1.2.5.3] D A3L23_03670 fadH; 2,4-dienoyl-CoA reductase [NADPH] K00219 fadH; 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34] D A3L23_00261 tyrA_1; T-protein K24002 cmlC; 4-amino-4-deoxyprephenate dehydrogenase [EC:1.3.1.121] D A3L23_04984 ccrA2; Crotonyl-CoA reductase K28720 divR; (2E)-2-enoyl-CoA carboxylase/reductase [EC:1.3.1.129] D A3L23_00297 mftC; Putative mycofactocin radical SAM maturase MftC K24696 mftC; [mycofactocin precursor peptide]-tyrosine decarboxylase / 3-amino-5-[(4-hydroxyphenyl)methyl]-4,4-dimethylpyrrolidin-2-one synthase [EC:1.3.98.7 4.1.99.26] D A3L23_02887 Putative oxidoreductase K21401 menJ; menaquinone-9 beta-reductase [EC:1.3.99.38] D A3L23_00296 mftD_2; Putative mycofactocin system heme/flavin oxidoreductase MftD K24693 mftD; pre-mycofactocin synthase [EC:1.4.3.26] D A3L23_02445 proC_1; Pyrroline-5-carboxylate reductase K06988 fno; 8-hydroxy-5-deazaflavin:NADPH oxidoreductase [EC:1.5.1.40] D A3L23_03851 hypothetical protein K18208 RNLS; renalase [EC:1.6.3.5] D A3L23_00106 lpdA; NAD(P)H dehydrogenase (quinone) K23842 lpdA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D A3L23_01595 qorA_1; Quinone oxidoreductase 1 K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D A3L23_02627 qorA_2; Quinone oxidoreductase 1 K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D A3L23_03184 2-haloacrylate reductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D A3L23_04340 qorA_3; Quinone oxidoreductase 1 K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D A3L23_03217 azoR1; FMN-dependent NADH-azoreductase 1 K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17] D A3L23_04639 mtr; Mycothione reductase K17883 mtr; mycothione reductase [EC:1.8.1.15] D A3L23_02014 msrA; Peptide methionine sulfoxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D A3L23_04439 msrB; Peptide methionine sulfoxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] D A3L23_03153 yqjG; Glutathionyl-hydroquinone reductase YqjG K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7] D A3L23_00952 ydbD; putative manganese catalase K07217 ydbD; manganese catalase [EC:1.11.1.6] D A3L23_01948 bpoA2; Non-heme bromoperoxidase BPO-A2 K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10] D A3L23_02774 cpo_3; Non-heme chloroperoxidase K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10] D A3L23_04144 cpo_4; Non-heme chloroperoxidase K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10] D A3L23_00319 bcpB_1; Putative peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D A3L23_03596 bcp_2; Putative peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D A3L23_04018 bcpB_2; Putative peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D A3L23_00361 ohrA; Organic hydroperoxide resistance protein OhrA K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28] D A3L23_00744 ohrB; Organic hydroperoxide resistance protein OhrB K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28] D A3L23_02522 osmC; Peroxiredoxin OsmC K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28] D A3L23_04502 ahpD; Alkyl hydroperoxide reductase AhpD K04756 ahpD; lipoyl-dependent peroxiredoxin subunit D [EC:1.11.1.28] D A3L23_04501 Alkyl hydroperoxide reductase subunit C K24126 ahpC; lipoyl-dependent peroxiredoxin subunit C [EC:1.11.1.28] D A3L23_03839 Putative peroxiredoxin K24120 ahpE; mycoredoxin-dependent peroxiredoxin [EC:1.11.1.29] D A3L23_01502 Putative quercetin 2,3-dioxygenase K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D A3L23_01568 Putative quercetin 2,3-dioxygenase K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D A3L23_01689 Putative quercetin 2,3-dioxygenase K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D A3L23_01692 Putative quercetin 2,3-dioxygenase K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D A3L23_00473 hmp_1; Flavohemoprotein K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17] D A3L23_00820 pvdA_1; L-ornithine N(5)-monooxygenase K10531 pvdA; L-ornithine N5-monooxygenase [EC:1.14.13.195 1.14.13.196] D A3L23_04976 pvdA_2; L-ornithine N(5)-monooxygenase K10531 pvdA; L-ornithine N5-monooxygenase [EC:1.14.13.195 1.14.13.196] D A3L23_00433 dmoA; Dimethyl-sulfide monooxygenase K20938 ladA; long-chain alkane monooxygenase [EC:1.14.14.28] D A3L23_02524 mhuD; Heme-degrading monooxygenase HmoB K21481 mhuD; heme oxygenase (mycobilin-producing) [EC:1.14.99.57] D A3L23_00262 hypothetical protein K24704 cmlI; alpha-N-dichloroacetyl-p-aminophenylserinol N-oxygenase [EC:1.14.99.67] D A3L23_00891 fprB_1; putative ferredoxin/ferredoxin--NADP reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D A3L23_02602 fprA; NADPH-ferredoxin reductase FprA K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D A3L23_03532 fprB_2; putative ferredoxin/ferredoxin--NADP reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D A3L23_00549 arsC; Arsenate reductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1] D A3L23_02884 Putative glutaredoxin.1 K18917 mrx1; mycoredoxin [EC:1.20.4.3] D A3L23_04837 Putative glutaredoxin.1 K18917 mrx1; mycoredoxin [EC:1.20.4.3] D A3L23_01426 arsC2; Arsenate-mycothiol transferase ArsC2 K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4] D A3L23_01229 pcaA; Cyclopropane mycolic acid synthase 3 K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D A3L23_02348 putative fatty acid methyltransferase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D A3L23_04802 putative fatty acid methyltransferase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D A3L23_04803 cfa; Cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D A3L23_04940 Geranyl diphosphate 2-C-methyltransferase K16217 gppmt; geranyl diphosphate 2-C-methyltransferase [EC:2.1.1.255] D A3L23_04941 Geranyl diphosphate 2-C-methyltransferase K16217 gppmt; geranyl diphosphate 2-C-methyltransferase [EC:2.1.1.255] D A3L23_01237 elmMIII; 8-demethyl-8-(2, 3-dimethoxy-alpha-L-rhamnosyl)-tetracenomycin-C 4'-O-methyltransferase K05303 K05303; O-methyltransferase [EC:2.1.1.-] D A3L23_00559 Putative acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79] D A3L23_01684 maa; Maltose O-acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79] D A3L23_00766 mshD_2; Mycothiol acetyltransferase K15520 mshD; mycothiol synthase [EC:2.3.1.189] D A3L23_04230 lnt_1; Apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D A3L23_05116 lnt_2; Apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D A3L23_03763 hypothetical protein K22797 octT; diglucosylglycerate octanoyltransferase [EC:2.3.1.273] D A3L23_03815 hypothetical protein K22463 afsA; 2-oxo-3-(phosphooxy)propyl 3-oxoalkanoate synthase [EC:2.3.1.277] D A3L23_04925 hypothetical protein K22463 afsA; 2-oxo-3-(phosphooxy)propyl 3-oxoalkanoate synthase [EC:2.3.1.277] D A3L23_04949 papA5; Phthiocerol/phthiodiolone dimycocerosyl transferase K23414 papA5; phenolphthiocerol/phthiocerol/phthiodiolone dimycocerosyl transferase [EC:2.3.1.282] D A3L23_01352 hypothetical protein K29111 trzA; aromatic amino acid N-acyltransferase [EC:2.3.1.339] D A3L23_01907 ysnE; putative N-acetyltransferase YsnE K03829 yedL; putative acetyltransferase [EC:2.3.1.-] D A3L23_02806 mnaT; L-amino acid N-acyltransferase MnaT K24217 mnaT; L-amino acid N-acyltransferase [EC:2.3.1.-] D A3L23_01392 hypothetical protein K27307 tmaT; acetyltransferase [EC:2.3.1.-] D A3L23_00724 hypothetical protein K22757 QCT; glutaminyl-peptide cyclotransferase [EC:2.3.2.5] D A3L23_04757 hypothetical protein K22310 olsB; L-ornithine Nalpha-acyltransferase [EC:2.3.2.30] D A3L23_00964 mshA_1; D-inositol 3-phosphate glycosyltransferase K15521 mshA; D-inositol-3-phosphate glycosyltransferase [EC:2.4.1.250] D A3L23_02775 mshA_3; D-inositol 3-phosphate glycosyltransferase K15521 mshA; D-inositol-3-phosphate glycosyltransferase [EC:2.4.1.250] D A3L23_01087 mshA_2; D-inositol 3-phosphate glycosyltransferase K00754 bshA; L-malate glycosyltransferase [EC:2.4.1.-] D A3L23_04945 fas4; Adenylate dimethylallyltransferase K22871 tzs; adenylate dimethylallyltransferase [EC:2.5.1.27] D A3L23_04024 lgt; Prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D A3L23_04705 hypothetical protein K07030 fakA; fatty acid kinase [EC:2.7.2.18] D A3L23_03877 glnE; Glutamate-ammonia-ligase adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89] D A3L23_01920 hypothetical protein K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D A3L23_02531 disA; DNA integrity scanning protein DisA K07067 disA; diadenylate cyclase [EC:2.7.7.85] D A3L23_00951 hypothetical protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108] D A3L23_00631 smtB_1; Succinyl-CoA--L-malate CoA-transferase beta subunit K18313 sct; succinyl-CoA---D-citramalate CoA-transferase [EC:2.8.3.20] D A3L23_01260 smtB_2; Succinyl-CoA--L-malate CoA-transferase beta subunit K18313 sct; succinyl-CoA---D-citramalate CoA-transferase [EC:2.8.3.20] D A3L23_01427 arsC1; Arsenate-mycothiol transferase ArsC1 K18701 arsC; arsenate-mycothiol transferase [EC:2.8.4.2] D A3L23_01925 cut3_1; putative cutinase cut3 K08095 CUT1_2_3; cutinase [EC:3.1.1.74] D A3L23_03539 ymdB; O-acetyl-ADP-ribose deacetylase K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106] D A3L23_00634 pnbA_1; Para-nitrobenzyl esterase K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-] D A3L23_03225 pnbA_2; Para-nitrobenzyl esterase K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-] D A3L23_03302 Carboxylesterase K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-] D A3L23_04843 lipV; Lipase LipV K19311 lipV; lipase [EC:3.1.1.-] D A3L23_02029 hypothetical protein K27360 cut6; phospholipase A/thioesterase [EC:3.1.1.-] D A3L23_00278 hypothetical protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D A3L23_03241 hypothetical protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D A3L23_03688 hypothetical protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D A3L23_03690 hypothetical protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D A3L23_01538 plsC_1; 1-acyl-sn-glycerol-3-phosphate acyltransferase K15781 serB-plsC; putative phosphoserine phosphatase / 1-acylglycerol-3-phosphate O-acyltransferase [EC:3.1.3.3 2.3.1.51] D A3L23_03762 gpgP; Glucosyl-3-phosphoglycerate phosphatase K22306 gpgP; glucosyl-3-phosphoglycerate phosphatase [EC:3.1.3.85] D A3L23_03133 phnPP; Phosphoribosyl 1,2-cyclic phosphate 1,2-diphosphodiesterase K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97] D A3L23_02022 Putative decaprenylphosphoryl-5-phosphoribose phosphatase K27842 E3.1.3.111; decaprenylphosphoryl-5-phosphoribose phosphatase [EC:3.1.3.111] D A3L23_02952 hypothetical protein K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-] D A3L23_00539 ycfH; putative deoxyribonuclease YcfH K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D A3L23_03565 nucS; Endonuclease NucS K07503 nucS; endonuclease [EC:3.1.-.-] D A3L23_01782 hypothetical protein K23086 ggH; glucosylglycerate hydrolase [EC:3.2.1.208] D A3L23_01370 hypothetical protein K27495 endoMA; D-arabinan endo alpha-(1,5)-arabinofuranosidase [EC:3.2.1.226] D A3L23_01800 hypothetical protein K27495 endoMA; D-arabinan endo alpha-(1,5)-arabinofuranosidase [EC:3.2.1.226] D A3L23_03337 hypothetical protein K27495 endoMA; D-arabinan endo alpha-(1,5)-arabinofuranosidase [EC:3.2.1.226] D A3L23_00291 mftE; Putative mycofactocin system creatinine amidohydrolase family protein MftE K24697 mftE; mycofactocin precursor peptide peptidase [EC:3.4.14.14] D A3L23_01946 D-alanyl-D-alanine carboxypeptidase K01286 E3.4.16.4; D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4] D A3L23_03556 dag_2; N-acyl-D-glutamate deacylase K06015 E3.5.1.81; N-acyl-D-amino-acid deacylase [EC:3.5.1.81] D A3L23_02665 def_1; Peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D A3L23_03334 def_2; Peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D A3L23_03962 def_3; Peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D A3L23_04972 def_4; Peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D A3L23_03070 mshB_2; 1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside deacetylase K15525 mshB; N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase [EC:3.5.1.103] D A3L23_03004 mca_2; Mycothiol S-conjugate amidase K18455 mca; mycothiol S-conjugate amidase [EC:3.5.1.115] D A3L23_00694 Hydrolase K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128] D A3L23_01639 8-oxoguanine deaminase K18456 E3.5.4.32; 8-oxoguanine deaminase [EC:3.5.4.32] D A3L23_04319 hypothetical protein K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D A3L23_01951 hypothetical protein K22213 PATG; 6-methylsalicylate decarboxylase [EC:4.1.1.52] D A3L23_02432 splG; Spore photoproduct lyase K03716 splB; spore photoproduct lyase [EC:4.1.99.14] D A3L23_00201 nnr; Bifunctional NAD(P)H-hydrate repair enzyme Nnr K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D A3L23_00895 aroB_1; 3-dehydroquinate synthase K21342 nos2; demethyl-4-deoxygadusol synthase [EC:4.2.3.154] D A3L23_00690 fkbP_1; FK506-binding protein K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8] D A3L23_04226 hypothetical protein K23874 cmlD; 4-amino-4-deoxychorismate mutase [EC:5.4.99.67] D A3L23_04280 mshC; L-cysteine:1D-myo-inositol 2-amino-2-deoxy-alpha-D-glucopyranoside ligase K15526 mshC; L-cysteine:1D-myo-inositol 2-amino-2-deoxy-alpha-D-glucopyranoside ligase [EC:6.3.1.13] D A3L23_02981 accD5_4; putative propionyl-CoA carboxylase beta chain 5 K01970 accD2; acyl-CoA carboxylase subunit beta [EC:6.4.1.-] D A3L23_00682 accD3_1; Putative acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K04104 accD3; acyl-CoA carboxylase subunit beta [EC:6.4.1.-] D A3L23_02190 accD3_2; Putative acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K04104 accD3; acyl-CoA carboxylase subunit beta [EC:6.4.1.-] D A3L23_03492 accD3_3; Putative acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K04104 accD3; acyl-CoA carboxylase subunit beta [EC:6.4.1.-] D A3L23_02982 accA1_2; Acetyl-/propionyl-coenzyme A carboxylase alpha chain K27596 accA2; acyl-CoA carboxylase subunit alpha [EC:6.4.1.-] D A3L23_01138 copB; Copper-exporting P-type ATPase B K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9] D A3L23_01725 ctpC; putative manganese/zinc-exporting P-type ATPase K12950 ctpC; manganese-transporting P-type ATPase C [EC:7.2.2.22] D A3L23_00663 ctpE; putative cation-transporting ATPase E K12952 ctpE; cation-transporting P-type ATPase E [EC:7.2.2.-] D A3L23_05131 ctpG; putative cation-transporting ATPase G K12954 ctpG; cation-transporting P-type ATPase G [EC:7.2.2.-] D A3L23_00505 ctpJ; putative cation-transporting P-type ATPase J K21887 ctpJ; cation-transporting P-type ATPase J [EC:7.2.2.-] C 99981 Carbohydrate metabolism D A3L23_04490 acuC; Acetoin utilization protein AcuC K04768 acuC; acetoin utilization protein AcuC C 99982 Energy metabolism D A3L23_03724 fdhD; Protein FdhD K02379 fdhD; FdhD protein D A3L23_01318 Ferredoxin K05337 fer; ferredoxin D A3L23_04329 iscU; Iron-sulfur cluster assembly scaffold protein IscU K04488 iscU; nitrogen fixation protein NifU and related proteins D A3L23_04759 etfB; Electron transfer flavoprotein subunit beta K03521 fixA; electron transfer flavoprotein beta subunit C 99983 Lipid metabolism D A3L23_00620 aidB_1; Putative acyl-CoA dehydrogenase AidB K09456 aidB; putative acyl-CoA dehydrogenase D A3L23_03764 DegV domain-containing protein K25232 fakB; fatty acid kinase fatty acid binding subunit C 99984 Nucleotide metabolism D A3L23_04782 Putative NrdI-like protein K03647 nrdI; protein involved in ribonucleotide reduction C 99985 Amino acid metabolism D A3L23_03956 hypothetical protein K06997 yggS; PLP dependent protein D A3L23_01635 ydaF_2; Putative ribosomal N-acetyltransferase YdaF K22479 argA; N-acetyltransferase C 99986 Glycan metabolism D A3L23_00730 rpfA; Resuscitation-promoting factor RpfA K21687 rpfA; resuscitation-promoting factor RpfA D A3L23_00538 rpfB; Resuscitation-promoting factor RpfB K21688 rpfB; resuscitation-promoting factor RpfB D A3L23_04827 rpfE; Resuscitation-promoting factor RpfE K21691 rpfE; resuscitation-promoting factor RpfE D A3L23_01636 hypothetical protein K07027 K07027; glycosyltransferase 2 family protein D A3L23_02051 hypothetical protein K07027 K07027; glycosyltransferase 2 family protein D A3L23_00290 mftF_3; Putative mycofactocin biosynthesis glycosyltransferase MftF K24698 mftF; mycofactocin glycosyltransferase C 99987 Cofactor metabolism D A3L23_00971 abgT; p-aminobenzoyl-glutamate transport protein K12942 abgT; aminobenzoyl-glutamate transport protein D A3L23_00299 hypothetical protein K24694 mftA; mycofactocin precursor peptide MftA D A3L23_00298 hypothetical protein K24695 mftB; mycofactocin biosynthesis protein MftB C 99988 Secondary metabolism D A3L23_00436 hypothetical protein K24084 aidA; quorum-quenching protein AidA D A3L23_03662 hypothetical protein K24084 aidA; quorum-quenching protein AidA C 99999 Others D A3L23_00546 mhqP_1; Putative oxidoreductase MhqP K15977 K15977; putative oxidoreductase D A3L23_04738 mhqP_2; Putative oxidoreductase MhqP K15977 K15977; putative oxidoreductase B B 09192 Unclassified: genetic information processing C 99973 Transcription D A3L23_00727 csp; Cold shock-like protein K03704 cspA; cold shock protein D A3L23_02417 cspA_1; putative cold shock protein A K03704 cspA; cold shock protein D A3L23_03155 cspA_2; putative cold shock protein A K03704 cspA; cold shock protein D A3L23_03831 cspV; Cold shock protein CspV K03704 cspA; cold shock protein D A3L23_04677 rpsA_2; 30S ribosomal protein S1 K06959 tex; protein Tex C 99974 Translation C 99975 Protein processing D A3L23_03990 hypothetical protein K03668 hslJ; heat shock protein HslJ D A3L23_03577 clpS; ATP-dependent Clp protease adapter protein ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS D A3L23_03707 tig; Trigger factor K03545 tig; trigger factor D A3L23_04202 ureF; Urease accessory protein UreF K03188 ureF; urease accessory protein D A3L23_04203 ureG; Urease accessory protein UreG K03189 ureG; urease accessory protein D A3L23_04204 ureD; Urease accessory protein UreD K03190 ureD; urease accessory protein D A3L23_04810 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein D A3L23_04783 nrdH_1; Glutaredoxin-like protein NrdH K06191 nrdH; glutaredoxin-like protein NrdH D A3L23_05187 nrdH_2; Glutaredoxin-like protein NrdH K06191 nrdH; glutaredoxin-like protein NrdH D A3L23_04669 comM; Competence protein ComM K07391 comM; magnesium chelatase family protein D A3L23_02837 ccsB; Cytochrome c biogenesis protein CcsB K07399 resB; cytochrome c biogenesis protein D A3L23_05117 ccs1; Cytochrome c biogenesis protein Ccs1 K07399 resB; cytochrome c biogenesis protein D A3L23_03319 pucA_1; putative xanthine dehydrogenase subunit A K07402 xdhC; xanthine dehydrogenase accessory factor D A3L23_03487 pucA_2; putative xanthine dehydrogenase subunit A K07402 xdhC; xanthine dehydrogenase accessory factor D A3L23_03681 pucA_3; putative xanthine dehydrogenase subunit A K07402 xdhC; xanthine dehydrogenase accessory factor C 99976 Replication and repair D A3L23_04844 atl; DNA base-flipping protein K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein D A3L23_03024 rmuC; DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC D A3L23_04670 hypothetical protein K07460 yraN; putative endonuclease D A3L23_04266 hypothetical protein K07465 K07465; putative RecB family exonuclease D A3L23_04668 hypothetical protein K04096 smf; DNA processing protein D A3L23_04868 hypothetical protein K04096 smf; DNA processing protein D A3L23_04391 putative AAA domain-containing protein K07478 ycaJ; putative ATPase D A3L23_03848 hypothetical protein K07483 K07483; transposase D A3L23_05081 hypothetical protein K07483 K07483; transposase D A3L23_03847 hypothetical protein K07497 K07497; putative transposase D A3L23_05080 hypothetical protein K07497 K07497; putative transposase D A3L23_05087 hypothetical protein K07497 K07497; putative transposase D A3L23_05149 hypothetical protein K07497 K07497; putative transposase D A3L23_05150 tnsB; Transposon Tn7 transposition protein TnsB K07497 K07497; putative transposase C 99979 Viral proteins C 99998 Others D A3L23_04539 35 kDa protein K03969 pspA; phage shock protein A D A3L23_02352 Nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D A3L23_02092 focA; putative formate transporter 1 K21990 yfdC; formate-nitrite transporter family protein D A3L23_00040 yhdG_1; putative amino acid permease YhdG K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D A3L23_00340 yhdG_4; putative amino acid permease YhdG K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D A3L23_01423 putative transporter K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D A3L23_04589 yhdG_7; putative amino acid permease YhdG K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D A3L23_00847 citN_1; Citrate transporter K03300 TC.CITMHS; citrate-Mg2+:H+ or citrate-Ca2+:H+ symporter, CitMHS family D A3L23_03353 citN_2; Citrate transporter K03300 TC.CITMHS; citrate-Mg2+:H+ or citrate-Ca2+:H+ symporter, CitMHS family D A3L23_00932 dtpT; Di-/tripeptide transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family D A3L23_02868 pitA; Low-affinity inorganic phosphate transporter 1 K03306 TC.PIT; inorganic phosphate transporter, PiT family D A3L23_04153 alsT; Amino-acid carrier protein AlsT K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D A3L23_00293 pucI; putative allantoin permease K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family D A3L23_03306 hypothetical protein K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family C 99978 Cell growth D A3L23_01815 hypothetical protein K06346 jag; spoIIIJ-associated protein C 99993 Cell motility C 99995 Signaling proteins D A3L23_03301 hypothetical protein K05792 terA; tellurite resistance protein TerA D A3L23_01739 yceD_2; General stress protein 16U K05795 terD; tellurium resistance protein TerD D A3L23_03060 yceD_3; General stress protein 16U K05795 terD; tellurium resistance protein TerD D A3L23_03067 typA; GTP-binding protein TypA/BipA K06207 typA; GTP-binding protein D A3L23_03793 PhoH-like protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins D A3L23_03012 PhoH-like protein K07175 phoH2; PhoH-like ATPase D A3L23_04563 hypothetical protein K07182 K07182; CBS domain-containing protein D A3L23_02890 hypothetical protein K09767 yajQ; cyclic-di-GMP-binding protein D A3L23_03084 bdcA; Cyclic-di-GMP-binding biofilm dispersal mediator protein K19336 bdcA; cyclic-di-GMP-binding biofilm dispersal mediator protein C 99992 Structural proteins C 99994 Others D A3L23_00761 hypothetical protein K02039 phoU; phosphate transport system protein D A3L23_02327 hypothetical protein K02039 phoU; phosphate transport system protein D A3L23_04223 hypothetical protein K05793 terB; tellurite resistance protein TerB D A3L23_01428 czcO_2; putative oxidoreductase CzcO K07222 K07222; putative flavoprotein involved in K+ transport D A3L23_01542 czcO_3; putative oxidoreductase CzcO K07222 K07222; putative flavoprotein involved in K+ transport D A3L23_02471 hapE_1; 4-hydroxyacetophenone monooxygenase K07222 K07222; putative flavoprotein involved in K+ transport B B 09194 Poorly characterized C 99996 General function prediction only D A3L23_01303 hypothetical protein K02348 elaA; ElaA protein D A3L23_04636 yjcF; putative N-acetyltransferase YjcF K02348 elaA; ElaA protein D A3L23_02279 polX; DNA polymerase/3'-5' exonuclease PolX K04477 ycdX; putative hydrolase D A3L23_02416 cshB; DEAD-box ATP-dependent RNA helicase CshB K06877 K06877; DEAD/DEAH box helicase domain-containing protein D A3L23_03694 glbO; Group 2 truncated hemoglobin GlbO K06886 glbN; hemoglobin D A3L23_00376 ydfJ_1; Membrane protein YdfJ K06994 K06994; putative drug exporter of the RND superfamily D A3L23_00867 ydfJ_2; Membrane protein YdfJ K06994 K06994; putative drug exporter of the RND superfamily D A3L23_02285 ydfJ_3; Membrane protein YdfJ K06994 K06994; putative drug exporter of the RND superfamily D A3L23_02908 ydfJ_4; Membrane protein YdfJ K06994 K06994; putative drug exporter of the RND superfamily D A3L23_04927 Putative membrane protein mmpL11 K06994 K06994; putative drug exporter of the RND superfamily D A3L23_05176 ydfJ_5; Membrane protein YdfJ K06994 K06994; putative drug exporter of the RND superfamily D A3L23_01598 hypothetical protein K07001 K07001; NTE family protein D A3L23_04333 sufB; FeS cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB D A3L23_04332 sufD; FeS cluster assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD D A3L23_00139 yhjD_1; Inner membrane protein YhjD K07058 K07058; membrane protein D A3L23_00360 hypothetical protein K07058 K07058; membrane protein D A3L23_01294 hypothetical protein K07058 K07058; membrane protein D A3L23_04484 hypothetical protein K07058 K07058; membrane protein D A3L23_04232 hypothetical protein K07113 fxsA; UPF0716 protein FxsA D A3L23_00074 putative SufE-like protein K02426 sufE; cysteine desulfuration protein SufE D A3L23_03193 glpE_2; Thiosulfate sulfurtransferase GlpE K07146 K07146; UPF0176 protein D A3L23_04156 hypothetical protein K04750 phnB; PhnB protein D A3L23_03175 pspB_4; Putative phosphoserine phosphatase 2 K15640 K15640; uncharacterized phosphatase D A3L23_05105 hypothetical protein K02351 K02351; putative membrane protein D A3L23_02564 hypothetical protein K03744 lemA; LemA protein D A3L23_03527 hypothetical protein K03748 sanA; SanA protein D A3L23_02577 putative membrane protein K03975 dedA; membrane-associated protein D A3L23_02578 putative membrane protein K03975 dedA; membrane-associated protein D A3L23_04920 yqjA_2; Inner membrane protein YqjA K03975 dedA; membrane-associated protein D A3L23_02853 hypothetical protein K08972 K08972; putative membrane protein D A3L23_03074 hypothetical protein K08981 K08981; putative membrane protein D A3L23_04818 hypothetical protein K08987 K08987; putative membrane protein D A3L23_04002 hypothetical protein K09858 K09858; SEC-C motif domain protein C 99997 Function unknown D A3L23_01408 hypothetical protein K06860 K06860; putative heme uptake system protein D A3L23_01297 hypothetical protein K06867 K06867; uncharacterized protein D A3L23_02002 hypothetical protein K06867 K06867; uncharacterized protein D A3L23_03006 hypothetical protein K06888 K06888; uncharacterized protein D A3L23_02339 hypothetical protein K06889 K06889; uncharacterized protein D A3L23_03087 hypothetical protein K06929 K06929; uncharacterized protein D A3L23_04805 hypothetical protein K06954 K06954; uncharacterized protein D A3L23_04681 hypothetical protein K06960 K06960; uncharacterized protein D A3L23_00904 hypothetical protein K06975 K06975; uncharacterized protein D A3L23_02661 hypothetical protein K06975 K06975; uncharacterized protein D A3L23_02662 hypothetical protein K06975 K06975; uncharacterized protein D A3L23_03213 hypothetical protein K06975 K06975; uncharacterized protein D A3L23_04648 mshD_7; Mycothiol acetyltransferase K06976 K06976; uncharacterized protein D A3L23_02903 Putative serine esterase K06978 K06978; uncharacterized protein D A3L23_03356 cocE; Cocaine esterase K06978 K06978; uncharacterized protein D A3L23_00804 hypothetical protein K06986 K06986; uncharacterized protein D A3L23_03693 hypothetical protein K06995 K06995; uncharacterized protein D A3L23_03291 hypothetical protein K07005 K07005; uncharacterized protein D A3L23_02289 hypothetical protein K07006 K07006; uncharacterized protein D A3L23_03499 hypothetical protein K07006 K07006; uncharacterized protein D A3L23_04239 hypothetical protein K07006 K07006; uncharacterized protein D A3L23_04691 hypothetical protein K07006 K07006; uncharacterized protein D A3L23_04432 hypothetical protein K07020 K07020; uncharacterized protein D A3L23_00581 hypothetical protein K07032 K07032; uncharacterized protein D A3L23_02240 hypothetical protein K07032 K07032; uncharacterized protein D A3L23_03550 hypothetical protein K07032 K07032; uncharacterized protein D A3L23_01604 hypothetical protein K07044 K07044; uncharacterized protein D A3L23_01824 hypothetical protein K07044 K07044; uncharacterized protein D A3L23_02173 hypothetical protein K07044 K07044; uncharacterized protein D A3L23_00938 hypothetical protein K07045 K07045; uncharacterized protein D A3L23_01597 hypothetical protein K07045 K07045; uncharacterized protein D A3L23_02702 hypothetical protein K07045 K07045; uncharacterized protein D A3L23_04398 hypothetical protein K07054 K07054; uncharacterized protein D A3L23_01179 Epimerase family protein K07071 K07071; uncharacterized protein D A3L23_03887 Epimerase family protein K07071 K07071; uncharacterized protein D A3L23_00403 KsdD-like steroid dehydrogenase K07077 K07077; uncharacterized protein D A3L23_00427 hypothetical protein K07080 K07080; uncharacterized protein D A3L23_00852 Putative two-component membrane permease complex subunit K07089 K07089; uncharacterized protein D A3L23_01431 hypothetical protein K07090 K07090; uncharacterized protein D A3L23_01478 hypothetical protein K07090 K07090; uncharacterized protein D A3L23_04235 hypothetical protein K07090 K07090; uncharacterized protein D A3L23_04546 hypothetical protein K07090 K07090; uncharacterized protein D A3L23_05173 hypothetical protein K07090 K07090; uncharacterized protein D A3L23_01778 hypothetical protein K07093 K07093; uncharacterized protein D A3L23_00166 hypothetical protein K07095 K07095; uncharacterized protein D A3L23_02381 putative metallophosphoesterase K07098 K07098; uncharacterized protein D A3L23_03201 putative metallophosphoesterase K07098 K07098; uncharacterized protein D A3L23_04178 putative metallophosphoesterase K07098 K07098; uncharacterized protein D A3L23_03183 gpt; Xanthine phosphoribosyltransferase K07101 K07101; uncharacterized protein D A3L23_00849 hypothetical protein K07120 K07120; uncharacterized protein D A3L23_02879 hypothetical protein K07120 K07120; uncharacterized protein D A3L23_00435 fabG_3; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K07124 K07124; uncharacterized protein D A3L23_01328 putative oxidoreductase K07124 K07124; uncharacterized protein D A3L23_03088 isfD_1; Sulfoacetaldehyde reductase K07124 K07124; uncharacterized protein D A3L23_03188 ydfG_2; NADP-dependent 3-hydroxy acid dehydrogenase YdfG K07124 K07124; uncharacterized protein D A3L23_03378 hypothetical protein K07133 K07133; uncharacterized protein D A3L23_02712 hypothetical protein K07140 K07140; MOSC domain-containing protein D A3L23_01589 hypothetical protein K07157 K07157; uncharacterized protein D A3L23_00305 hypothetical protein K07161 K07161; uncharacterized protein D A3L23_03759 hypothetical protein K07161 K07161; uncharacterized protein D A3L23_03863 hypothetical protein K07164 K07164; uncharacterized protein D A3L23_01817 yidD; Putative membrane protein insertion efficiency factor K08998 K08998; uncharacterized protein D A3L23_04175 hypothetical protein K08999 K08999; uncharacterized protein D A3L23_00496 hypothetical protein K09009 K09009; uncharacterized protein D A3L23_02382 hypothetical protein K09117 K09117; uncharacterized protein D A3L23_04828 hypothetical protein K09118 K09118; uncharacterized protein D A3L23_04053 hypothetical protein K09146 K09146; uncharacterized protein D A3L23_02625 hypothetical protein K09164 K09164; uncharacterized protein D A3L23_03296 hypothetical protein K09166 K09166; uncharacterized protein D A3L23_03075 hypothetical protein K09167 K09167; uncharacterized protein D A3L23_03318 hypothetical protein K09386 K09386; uncharacterized protein D A3L23_03481 hypothetical protein K09386 K09386; uncharacterized protein D A3L23_04804 hypothetical protein K09701 K09701; uncharacterized protein D A3L23_01641 hypothetical protein K09705 K09705; uncharacterized protein D A3L23_01582 hypothetical protein K09763 K09763; uncharacterized protein D A3L23_04159 hypothetical protein K09764 K09764; uncharacterized protein D A3L23_04614 hypothetical protein K09764 K09764; uncharacterized protein D A3L23_04543 hypothetical protein K09780 K09780; uncharacterized protein D A3L23_01699 yedI; Inner membrane protein YedI K09781 K09781; uncharacterized protein D A3L23_04080 hypothetical protein K09791 K09791; uncharacterized protein D A3L23_02599 hypothetical protein K09793 K09793; uncharacterized protein D A3L23_01738 hypothetical protein K09799 K09799; uncharacterized protein D A3L23_02260 26 kDa periplasmic immunogenic protein K09807 K09807; uncharacterized protein D A3L23_03297 hypothetical protein K09807 K09807; uncharacterized protein D A3L23_04624 hypothetical protein K09861 K09861; uncharacterized protein D A3L23_04553 hypothetical protein K09927 K09927; uncharacterized protein D A3L23_01678 hypothetical protein K09930 K09930; uncharacterized protein D A3L23_01367 hypothetical protein K09931 K09931; uncharacterized protein D A3L23_00320 hypothetical protein K09932 K09932; uncharacterized protein D A3L23_02271 hypothetical protein K09957 K09957; uncharacterized protein D A3L23_00285 hypothetical protein K09959 K09959; uncharacterized protein D A3L23_04248 hypothetical protein K09962 K09962; uncharacterized protein D A3L23_01024 hypothetical protein K09992 K09992; uncharacterized protein D A3L23_01030 hypothetical protein K09992 K09992; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: July 27, 2026