+D GENES KO
#
KEGG Orthology (KO) - Roseburia faecis
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:rfc00010]
D ACIRUI_09435 ROK family glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D ACIRUI_13925 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D ACIRUI_09840 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D ACIRUI_16200 pfkA; (GenBank) 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D ACIRUI_05145 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D ACIRUI_13730 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D ACIRUI_05065 fructose-bisphosphatase class III K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D ACIRUI_07200 fba; (GenBank) class II fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D ACIRUI_00590 tpiA; (GenBank) triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D ACIRUI_00580 gap; (GenBank) type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D ACIRUI_00585 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D ACIRUI_00600 gpmI; (GenBank) 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D ACIRUI_00620 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D ACIRUI_06450 eno; (GenBank) phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D ACIRUI_09460 pyk; (GenBank) pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D ACIRUI_04770 ppdK; (GenBank) pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D ACIRUI_05000 nifJ; (GenBank) pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D ACIRUI_06830 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D ACIRUI_09515 aldose epimerase family protein K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D ACIRUI_06960 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D ACIRUI_15085 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D ACIRUI_00355 pckA; (GenBank) phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
C 00020 Citrate cycle (TCA cycle) [PATH:rfc00020]
D ACIRUI_03515 2-isopropylmalate synthase K05942 E2.3.3.3; citrate (Re)-synthase [EC:2.3.3.3]
D ACIRUI_05505 citrate/2-methylcitrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D ACIRUI_03505 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D ACIRUI_11495 fumarate hydratase K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D ACIRUI_11500 Fe-S-containing hydro-lyase K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D ACIRUI_00355 pckA; (GenBank) phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D ACIRUI_05000 nifJ; (GenBank) pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
C 00030 Pentose phosphate pathway [PATH:rfc00030]
D ACIRUI_09840 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D ACIRUI_00335 rpe; (GenBank) ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D ACIRUI_07000 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D ACIRUI_10625 transketolase family protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D ACIRUI_10630 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D ACIRUI_13545 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D ACIRUI_13550 transketolase family protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D ACIRUI_13575 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D ACIRUI_13750 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D ACIRUI_13755 transketolase family protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D ACIRUI_10635 fsa; (GenBank) fructose-6-phosphate aldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D ACIRUI_06315 rpiB; (GenBank) ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D ACIRUI_16385 phosphoketolase K01621 xfp; xylulose-5-phosphate/fructose-6-phosphate phosphoketolase [EC:4.1.2.9 4.1.2.22]
D ACIRUI_04975 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D ACIRUI_06960 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D ACIRUI_15085 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D ACIRUI_14820 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D ACIRUI_07200 fba; (GenBank) class II fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D ACIRUI_05065 fructose-bisphosphatase class III K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D ACIRUI_16200 pfkA; (GenBank) 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D ACIRUI_05145 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D ACIRUI_13730 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C 00040 Pentose and glucuronate interconversions [PATH:rfc00040]
D ACIRUI_12850 L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D ACIRUI_00335 rpe; (GenBank) ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D ACIRUI_07000 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D ACIRUI_12840 araA; (GenBank) L-arabinose isomerase K01804 araA; L-arabinose isomerase [EC:5.3.1.4]
D ACIRUI_16075 xylB; (GenBank) xylulokinase K00854 xylB; xylulokinase [EC:2.7.1.17]
D ACIRUI_06750 zinc-binding dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D ACIRUI_07010 galactitol-1-phosphate 5-dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D ACIRUI_07015 IspD/TarI family cytidylyltransferase K21030 tarI; D-ribitol-5-phosphate cytidylyltransferase [EC:2.7.7.40]
C 00051 Fructose and mannose metabolism [PATH:rfc00051]
D ACIRUI_12885 cellulase family glycosylhydrolase K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78]
D ACIRUI_06735 carbohydrate kinase family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D ACIRUI_11985 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D ACIRUI_16200 pfkA; (GenBank) 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D ACIRUI_05145 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D ACIRUI_13730 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D ACIRUI_05065 fructose-bisphosphatase class III K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D ACIRUI_10530 pfkB; (GenBank) 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D ACIRUI_06750 zinc-binding dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D ACIRUI_07010 galactitol-1-phosphate 5-dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D ACIRUI_07200 fba; (GenBank) class II fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D ACIRUI_00590 tpiA; (GenBank) triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D ACIRUI_06315 rpiB; (GenBank) ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D ACIRUI_10525 fructose-specific PTS transporter subunit EIIC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
C 00052 Galactose metabolism [PATH:rfc00052]
D ACIRUI_09515 aldose epimerase family protein K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D ACIRUI_00705 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D ACIRUI_00710 galT; (GenBank) UDP-glucose--hexose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D ACIRUI_02730 galE; (GenBank) UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D ACIRUI_06960 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D ACIRUI_15085 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D ACIRUI_09435 ROK family glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D ACIRUI_13925 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D ACIRUI_08950 glycoside hydrolase family 2 TIM barrel-domain containing protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D ACIRUI_11575 glycoside hydrolase family 2 TIM barrel-domain containing protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D ACIRUI_16180 glycoside hydrolase family 2 TIM barrel-domain containing protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D ACIRUI_16185 beta-galactosidase small subunit K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D ACIRUI_05760 beta-galactosidase K12308 bgaB; beta-galactosidase [EC:3.2.1.23]
D ACIRUI_16020 beta-galactosidase K12308 bgaB; beta-galactosidase [EC:3.2.1.23]
D ACIRUI_05920 glf; (GenBank) UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D ACIRUI_14245 glf; (GenBank) UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D ACIRUI_14455 glf; (GenBank) UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D ACIRUI_08940 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D ACIRUI_12735 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D ACIRUI_15095 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D ACIRUI_12840 araA; (GenBank) L-arabinose isomerase K01804 araA; L-arabinose isomerase [EC:5.3.1.4]
D ACIRUI_16200 pfkA; (GenBank) 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D ACIRUI_05145 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D ACIRUI_13730 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D ACIRUI_11980 glycoside hydrolase family 32 protein K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D ACIRUI_07330 glycoside hydrolase family 31 protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D ACIRUI_07360 alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D ACIRUI_07925 alpha-glucosidase K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10]
C 00053 Ascorbate and aldarate metabolism
D ACIRUI_12850 L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
C 00500 Starch and sucrose metabolism [PATH:rfc00500]
D ACIRUI_11980 glycoside hydrolase family 32 protein K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D ACIRUI_07330 glycoside hydrolase family 31 protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D ACIRUI_07360 alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D ACIRUI_12740 gtfA; (GenBank) sucrose phosphorylase K00690 E2.4.1.7; sucrose phosphorylase [EC:2.4.1.7]
D ACIRUI_06365 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D ACIRUI_12635 glycoside hydrolase family 3 N-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D ACIRUI_16250 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D ACIRUI_09190 glycoside hydrolase family 5 protein K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D ACIRUI_13835 GH36-type glycosyl hydrolase domain-containing protein K00702 E2.4.1.20; cellobiose phosphorylase [EC:2.4.1.20]
D ACIRUI_13615 sugar phosphate nucleotidyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D ACIRUI_13625 rfbF; (GenBank) glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D ACIRUI_03985 glgD; (GenBank) glucose-1-phosphate adenylyltransferase subunit GlgD K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D ACIRUI_03990 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D ACIRUI_14840 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D ACIRUI_14845 glgD; (GenBank) glucose-1-phosphate adenylyltransferase subunit GlgD K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D ACIRUI_03465 glgA; (GenBank) glycogen synthase GlgA K00703 glgA; starch synthase [EC:2.4.1.21]
D ACIRUI_03825 glgA; (GenBank) glycogen synthase GlgA K00703 glgA; starch synthase [EC:2.4.1.21]
D ACIRUI_10365 glgB; (GenBank) 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D ACIRUI_16110 glycogen/starch/alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D ACIRUI_16300 glycogen/starch/alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D ACIRUI_04570 pulA; (GenBank) type I pullulanase K01200 pulA; pullulanase [EC:3.2.1.41]
D ACIRUI_09340 alpha-amylase family glycosyl hydrolase K01176 AMY; alpha-amylase [EC:3.2.1.1]
D ACIRUI_04850 glycoside hydrolase family 13 protein K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135]
D ACIRUI_10895 glycoside hydrolase family 13 protein K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135]
D ACIRUI_07925 alpha-glucosidase K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10]
D ACIRUI_04560 malQ; (GenBank) 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D ACIRUI_09360 malQ; (GenBank) 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D ACIRUI_02405 alpha-amylase family glycosyl hydrolase K01214 ISA; isoamylase [EC:3.2.1.68]
D ACIRUI_07740 glycogen debranching protein K01214 ISA; isoamylase [EC:3.2.1.68]
D ACIRUI_06960 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D ACIRUI_15085 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D ACIRUI_09435 ROK family glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D ACIRUI_13925 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D ACIRUI_09840 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D ACIRUI_06735 carbohydrate kinase family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D ACIRUI_11985 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00620 Pyruvate metabolism [PATH:rfc00620]
D ACIRUI_05000 nifJ; (GenBank) pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D ACIRUI_13995 pflB; (GenBank) formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D ACIRUI_01430 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D ACIRUI_06260 pta; (GenBank) phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D ACIRUI_09460 pyk; (GenBank) pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D ACIRUI_09270 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D ACIRUI_06830 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D ACIRUI_06745 VOC family protein K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D ACIRUI_12105 VOC family protein K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D ACIRUI_07565 MBL fold metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D ACIRUI_01805 NADP-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D ACIRUI_02870 oxaloacetate decarboxylase subunit alpha K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D ACIRUI_02865 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D ACIRUI_11495 fumarate hydratase K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D ACIRUI_11500 Fe-S-containing hydro-lyase K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D ACIRUI_00355 pckA; (GenBank) phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D ACIRUI_04770 ppdK; (GenBank) pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D ACIRUI_07820 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D ACIRUI_05305 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:rfc00630]
D ACIRUI_05505 citrate/2-methylcitrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D ACIRUI_07820 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D ACIRUI_01605 HAD hydrolase-like protein K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D ACIRUI_16485 HAD family hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D ACIRUI_06550 glnA; (GenBank) type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D ACIRUI_07195 glutamine synthetase III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D ACIRUI_15825 glyA; (GenBank) serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D ACIRUI_12520 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D ACIRUI_09745 fucO; (GenBank) lactaldehyde reductase K00048 fucO; lactaldehyde reductase [EC:1.1.1.77]
C 00640 Propanoate metabolism [PATH:rfc00640]
D ACIRUI_01430 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D ACIRUI_06260 pta; (GenBank) phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D ACIRUI_13995 pflB; (GenBank) formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D ACIRUI_07810 acyl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D ACIRUI_05505 citrate/2-methylcitrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D ACIRUI_06830 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D ACIRUI_03310 methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3]
D ACIRUI_09745 fucO; (GenBank) lactaldehyde reductase K00048 fucO; lactaldehyde reductase [EC:1.1.1.77]
C 00650 Butanoate metabolism [PATH:rfc00650]
D ACIRUI_07820 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D ACIRUI_07815 3-hydroxyacyl-CoA dehydrogenase family protein K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D ACIRUI_15855 enoyl-CoA hydratase-related protein K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D ACIRUI_07810 acyl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D ACIRUI_02865 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D ACIRUI_02860 biotin/lipoyl-containing protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D ACIRUI_13995 pflB; (GenBank) formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D ACIRUI_05000 nifJ; (GenBank) pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D ACIRUI_04825 ilvB; (GenBank) biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D ACIRUI_05435 ilvB; (GenBank) biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D ACIRUI_13485 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D ACIRUI_03680 ilvN; (GenBank) acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D ACIRUI_05430 ilvN; (GenBank) acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:rfc00660]
D ACIRUI_04825 ilvB; (GenBank) biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D ACIRUI_05435 ilvB; (GenBank) biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D ACIRUI_13485 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D ACIRUI_03680 ilvN; (GenBank) acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D ACIRUI_05430 ilvN; (GenBank) acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D ACIRUI_03650 leuC; (GenBank) 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D ACIRUI_03645 leuD; (GenBank) 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D ACIRUI_04835 leuB; (GenBank) 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism
D ACIRUI_00590 tpiA; (GenBank) triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:rfc00190]
D ACIRUI_06805 atpA; (GenBank) F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D ACIRUI_14130 atpA; (GenBank) F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D ACIRUI_06795 atpD; (GenBank) F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D ACIRUI_14140 atpD; (GenBank) F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D ACIRUI_06800 atpG; (GenBank) ATP synthase F1 subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D ACIRUI_14135 atpG; (GenBank) ATP synthase F1 subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D ACIRUI_06810 atpH; (GenBank) ATP synthase F1 subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D ACIRUI_14125 atpH; (GenBank) ATP synthase F1 subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D ACIRUI_06790 atpC; (GenBank) ATP synthase F1 subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D ACIRUI_14145 atpC; (GenBank) ATP synthase F1 subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D ACIRUI_06825 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D ACIRUI_14110 atpB; (GenBank) F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D ACIRUI_06815 atpF; (GenBank) F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D ACIRUI_14120 atpF; (GenBank) F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D ACIRUI_06820 atpE; (GenBank) ATP synthase F0 subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D ACIRUI_14115 atpE; (GenBank) ATP synthase F0 subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D ACIRUI_01770 putative manganese-dependent inorganic diphosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1]
D ACIRUI_02700 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D ACIRUI_08860 ppk1; (GenBank) polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:rfc00710]
D ACIRUI_00585 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D ACIRUI_00580 gap; (GenBank) type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D ACIRUI_07200 fba; (GenBank) class II fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D ACIRUI_05065 fructose-bisphosphatase class III K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D ACIRUI_10625 transketolase family protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D ACIRUI_10630 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D ACIRUI_13545 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D ACIRUI_13550 transketolase family protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D ACIRUI_13575 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D ACIRUI_13750 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D ACIRUI_13755 transketolase family protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D ACIRUI_06315 rpiB; (GenBank) ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D ACIRUI_00590 tpiA; (GenBank) triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D ACIRUI_00335 rpe; (GenBank) ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D ACIRUI_07000 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D ACIRUI_10635 fsa; (GenBank) fructose-6-phosphate aldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D ACIRUI_00355 pckA; (GenBank) phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D ACIRUI_04770 ppdK; (GenBank) pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
C 00720 Other carbon fixation pathways [PATH:rfc00720]
D ACIRUI_05000 nifJ; (GenBank) pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D ACIRUI_04770 ppdK; (GenBank) pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D ACIRUI_11495 fumarate hydratase K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D ACIRUI_11500 Fe-S-containing hydro-lyase K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D ACIRUI_07820 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D ACIRUI_03505 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D ACIRUI_03450 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D ACIRUI_03445 folD; (GenBank) bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D ACIRUI_01670 metF; (GenBank) methylenetetrahydrofolate reductase [NAD(P)H] K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D ACIRUI_11830 metF; (GenBank) methylenetetrahydrofolate reductase [NAD(P)H] K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D ACIRUI_06260 pta; (GenBank) phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D ACIRUI_01430 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00680 Methane metabolism [PATH:rfc00680]
D ACIRUI_15825 glyA; (GenBank) serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D ACIRUI_00620 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D ACIRUI_06450 eno; (GenBank) phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D ACIRUI_07200 fba; (GenBank) class II fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D ACIRUI_05065 fructose-bisphosphatase class III K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D ACIRUI_16200 pfkA; (GenBank) 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D ACIRUI_05145 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D ACIRUI_13730 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D ACIRUI_01430 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D ACIRUI_06260 pta; (GenBank) phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D ACIRUI_00600 gpmI; (GenBank) 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D ACIRUI_04815 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D ACIRUI_04820 serC; (GenBank) 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D ACIRUI_07910 thrH; (GenBank) bifunctional phosphoserine phosphatase/homoserine phosphotransferase ThrH K02203 thrH; phosphoserine / homoserine phosphotransferase [EC:3.1.3.3 2.7.1.39]
D ACIRUI_13110 histidine phosphatase family protein K22305 psp; phosphoserine phosphatase [EC:3.1.3.3]
C 00910 Nitrogen metabolism [PATH:rfc00910]
D ACIRUI_00490 P-loop NTPase K02588 nifH; nitrogenase iron protein NifH
D ACIRUI_00530 nitrogenase iron protein NifH K02588 nifH; nitrogenase iron protein NifH
D ACIRUI_13125 hcp; (GenBank) hydroxylamine reductase K05601 hcp; hydroxylamine reductase [EC:1.7.99.1]
D ACIRUI_09575 NAD(P)H-dependent flavin oxidoreductase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D ACIRUI_09385 gdhA; (GenBank) NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D ACIRUI_06550 glnA; (GenBank) type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D ACIRUI_07195 glutamine synthetase III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D ACIRUI_01865 gltB; (GenBank) glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D ACIRUI_01870 glutamate synthase subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D ACIRUI_04495 gltA; (GenBank) NADPH-dependent glutamate synthase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D ACIRUI_06930 arcC; (GenBank) carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00920 Sulfur metabolism [PATH:rfc00920]
D ACIRUI_08500 sulfate ABC transporter substrate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D ACIRUI_08495 cysT; (GenBank) sulfate ABC transporter permease subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D ACIRUI_08490 sulfate ABC transporter permease K02047 cysW; sulfate/thiosulfate transport system permease protein
D ACIRUI_08485 ABC transporter ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D ACIRUI_08465 sulfate adenylyltransferase subunit 1 K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D ACIRUI_08470 cysD; (GenBank) sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D ACIRUI_11615 cysC; (GenBank) adenylyl-sulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D ACIRUI_02795 bifunctional oligoribonuclease/PAP phosphatase NrnA K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D ACIRUI_08480 adenylyl-sulfate reductase subunit alpha K00394 aprA; adenylylsulfate reductase, subunit A [EC:1.8.99.2]
D ACIRUI_08475 ferredoxin family protein K00395 aprB; adenylylsulfate reductase, subunit B [EC:1.8.99.2]
D ACIRUI_08455 4Fe-4S binding protein K00385 asrC; anaerobic sulfite reductase subunit C
D ACIRUI_08510 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D ACIRUI_13275 cysK; (GenBank) cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D ACIRUI_04385 metA; (GenBank) homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:rfc00061]
D ACIRUI_01450 acpP; (GenBank) acyl carrier protein K02078 acpP; acyl carrier protein
D ACIRUI_09430 acpP; (GenBank) acyl carrier protein K02078 acpP; acyl carrier protein
D ACIRUI_09420 fabD; (GenBank) ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D ACIRUI_09395 beta-ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D ACIRUI_09410 fabF; (GenBank) beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D ACIRUI_07730 ymfI; (GenBank) elongation factor P 5-aminopentanone reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D ACIRUI_09415 fabG; (GenBank) 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D ACIRUI_13555 SDR family NAD(P)-dependent oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D ACIRUI_09405 fabZ; (GenBank) 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D ACIRUI_13540 fabZ; (GenBank) 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D ACIRUI_09425 fabK; (GenBank) enoyl-[acyl-carrier-protein] reductase FabK K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:rfc00071]
D ACIRUI_07820 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D ACIRUI_07810 acyl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
C 00073 Cutin, suberine and wax biosynthesis
C 00074 Mycolic acid biosynthesis
D ACIRUI_01450 acpP; (GenBank) acyl carrier protein K02078 acpP; acyl carrier protein
D ACIRUI_09430 acpP; (GenBank) acyl carrier protein K02078 acpP; acyl carrier protein
D ACIRUI_09420 fabD; (GenBank) ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis [PATH:rfc00121]
D ACIRUI_15945 bsh; (GenBank) choloylglycine hydrolase K01442 cbh; choloylglycine hydrolase [EC:3.5.1.24]
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:rfc00561]
D ACIRUI_12520 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D ACIRUI_13130 glpK; (GenBank) glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30]
D ACIRUI_01445 plsX; (GenBank) phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D ACIRUI_01565 plsY; (GenBank) glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D ACIRUI_11405 glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D ACIRUI_03235 lysophospholipid acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D ACIRUI_09330 lysophospholipid acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D ACIRUI_07205 diacylglycerol/lipid kinase family protein K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D ACIRUI_08940 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D ACIRUI_12735 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D ACIRUI_15095 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
C 00564 Glycerophospholipid metabolism [PATH:rfc00564]
D ACIRUI_01570 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D ACIRUI_01565 plsY; (GenBank) glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D ACIRUI_11405 glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D ACIRUI_03235 lysophospholipid acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D ACIRUI_09330 lysophospholipid acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D ACIRUI_07205 diacylglycerol/lipid kinase family protein K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D ACIRUI_02660 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D ACIRUI_03085 pgsA; (GenBank) CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D ACIRUI_02830 cls; (GenBank) cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D ACIRUI_10115 cls; (GenBank) cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D ACIRUI_15200 iron-containing alcohol dehydrogenase family protein K00096 araM; glycerol-1-phosphate dehydrogenase [NAD(P)+] [EC:1.1.1.261]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism [PATH:rfc00600]
D ACIRUI_08950 glycoside hydrolase family 2 TIM barrel-domain containing protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D ACIRUI_11575 glycoside hydrolase family 2 TIM barrel-domain containing protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D ACIRUI_16180 glycoside hydrolase family 2 TIM barrel-domain containing protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D ACIRUI_16185 beta-galactosidase small subunit K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D ACIRUI_08940 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D ACIRUI_12735 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D ACIRUI_15095 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:rfc00230]
D ACIRUI_04420 NUDIX domain-containing protein K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D ACIRUI_04975 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D ACIRUI_06960 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D ACIRUI_15085 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D ACIRUI_14820 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D ACIRUI_00610 purF; (GenBank) amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D ACIRUI_16480 purD; (GenBank) phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D ACIRUI_16475 purN; (GenBank) phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D ACIRUI_06080 phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D ACIRUI_16470 purM; (GenBank) phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D ACIRUI_16465 purE; (GenBank) 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D ACIRUI_00605 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D ACIRUI_00615 purB; (GenBank) adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D ACIRUI_00680 phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D ACIRUI_00675 IMP cyclohydrolase K11176 purO; IMP cyclohydrolase [EC:3.5.4.10]
D ACIRUI_16265 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D ACIRUI_04550 purine-nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D ACIRUI_01540 pgeF; (GenBank) peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D ACIRUI_14070 hpt; (GenBank) hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D ACIRUI_06560 guaB; (GenBank) IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D ACIRUI_15500 XTP/dITP diphosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D ACIRUI_03435 xanthine phosphoribosyltransferase K03816 xpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D ACIRUI_09150 guaA; (GenBank) glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D ACIRUI_03070 gmk; (GenBank) guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D ACIRUI_00745 nrdD; (GenBank) anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D ACIRUI_00200 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D ACIRUI_07570 RelA/SpoT family protein K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D ACIRUI_02695 HD domain-containing protein K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D ACIRUI_08405 GTP pyrophosphokinase family protein K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5]
D ACIRUI_13280 GTP pyrophosphokinase family protein K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5]
D ACIRUI_16225 GTP pyrophosphokinase family protein K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5]
D ACIRUI_01645 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D ACIRUI_04970 add; (GenBank) adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4]
D ACIRUI_14760 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D ACIRUI_08465 sulfate adenylyltransferase subunit 1 K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D ACIRUI_11615 cysC; (GenBank) adenylyl-sulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D ACIRUI_08470 cysD; (GenBank) sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D ACIRUI_06930 arcC; (GenBank) carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D ACIRUI_15690
C 00240 Pyrimidine metabolism [PATH:rfc00240]
D ACIRUI_08655 carB; (GenBank) carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D ACIRUI_08660 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D ACIRUI_00245 pyrB; (GenBank) aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D ACIRUI_00250 aspartate carbamoyltransferase regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D ACIRUI_16425 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D ACIRUI_16440 dihydroorotate dehydrogenase K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14]
D ACIRUI_16435 dihydroorotate dehydrogenase electron transfer subunit K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit
D ACIRUI_01580 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D ACIRUI_16450 pyrE; (GenBank) orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D ACIRUI_16430 pyrF; (GenBank) orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D ACIRUI_02645 pyrH; (GenBank) UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D ACIRUI_05350 Maf family protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D ACIRUI_07245 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D ACIRUI_02885 cmk; (GenBank) (d)CMP kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D ACIRUI_00220 nucleoside kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D ACIRUI_04985 udp; (GenBank) uridine phosphorylase K00757 udp; uridine phosphorylase [EC:2.4.2.3]
D ACIRUI_14085 upp; (GenBank) uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D ACIRUI_04980 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D ACIRUI_00745 nrdD; (GenBank) anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D ACIRUI_14080 deoxycytidylate deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D ACIRUI_01575 dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D ACIRUI_05450 thyA; (GenBank) thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D ACIRUI_09290
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:rfc00250]
D ACIRUI_09275 pyridoxal phosphate-dependent aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D ACIRUI_16050 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D ACIRUI_00825 asnA; (GenBank) aspartate--ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D ACIRUI_13860 asnB; (GenBank) asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D ACIRUI_12955 aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D ACIRUI_01705 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D ACIRUI_03770 argH; (GenBank) argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D ACIRUI_01645 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D ACIRUI_00615 purB; (GenBank) adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D ACIRUI_00245 pyrB; (GenBank) aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D ACIRUI_00250 aspartate carbamoyltransferase regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D ACIRUI_01865 gltB; (GenBank) glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D ACIRUI_01870 glutamate synthase subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D ACIRUI_04495 gltA; (GenBank) NADPH-dependent glutamate synthase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D ACIRUI_09385 gdhA; (GenBank) NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D ACIRUI_06550 glnA; (GenBank) type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D ACIRUI_07195 glutamine synthetase III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D ACIRUI_08655 carB; (GenBank) carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D ACIRUI_08660 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D ACIRUI_07720 glmS; (GenBank) glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D ACIRUI_00610 purF; (GenBank) amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:rfc00260]
D ACIRUI_08815 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D ACIRUI_03765 asd; (GenBank) aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D ACIRUI_07085 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D ACIRUI_07910 thrH; (GenBank) bifunctional phosphoserine phosphatase/homoserine phosphotransferase ThrH K02203 thrH; phosphoserine / homoserine phosphotransferase [EC:3.1.3.3 2.7.1.39]
D ACIRUI_03635 thrC; (GenBank) threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D ACIRUI_10660 threonine aldolase family protein K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D ACIRUI_15825 glyA; (GenBank) serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D ACIRUI_12520 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D ACIRUI_00600 gpmI; (GenBank) 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D ACIRUI_04815 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D ACIRUI_04820 serC; (GenBank) 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D ACIRUI_13110 histidine phosphatase family protein K22305 psp; phosphoserine phosphatase [EC:3.1.3.3]
D ACIRUI_01470 ilvA; (GenBank) threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D ACIRUI_04580 trpA; (GenBank) tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D ACIRUI_04585 trpB; (GenBank) tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:rfc00270]
D ACIRUI_08510 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D ACIRUI_13275 cysK; (GenBank) cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D ACIRUI_06525 MalY/PatB family protein K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D ACIRUI_06290 homocysteine S-methyltransferase family protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D ACIRUI_08015 metE; (GenBank) 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D ACIRUI_14885 metK; (GenBank) methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D ACIRUI_15035 speE; (GenBank) polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
D ACIRUI_06920 5'-methylthioadenosine/adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D ACIRUI_01540 pgeF; (GenBank) peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D ACIRUI_04730 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D ACIRUI_04735 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D ACIRUI_14540 dcm; (GenBank) DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D ACIRUI_06925 S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D ACIRUI_08815 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D ACIRUI_03765 asd; (GenBank) aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D ACIRUI_07085 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D ACIRUI_04385 metA; (GenBank) homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D ACIRUI_06265 O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase family protein K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D ACIRUI_08460 O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase family protein K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D ACIRUI_16575 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D ACIRUI_09275 pyridoxal phosphate-dependent aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D ACIRUI_06830 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D ACIRUI_04815 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D ACIRUI_04820 serC; (GenBank) 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:rfc00280]
D ACIRUI_16575 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D ACIRUI_07810 acyl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D ACIRUI_07820 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:rfc00290]
D ACIRUI_01470 ilvA; (GenBank) threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D ACIRUI_03650 leuC; (GenBank) 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D ACIRUI_03645 leuD; (GenBank) 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D ACIRUI_04835 leuB; (GenBank) 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D ACIRUI_04825 ilvB; (GenBank) biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D ACIRUI_05435 ilvB; (GenBank) biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D ACIRUI_13485 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D ACIRUI_03680 ilvN; (GenBank) acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D ACIRUI_05430 ilvN; (GenBank) acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D ACIRUI_03675 ilvC; (GenBank) ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D ACIRUI_04830 ilvD; (GenBank) dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D ACIRUI_16575 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D ACIRUI_05305 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:rfc00300]
D ACIRUI_07085 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D ACIRUI_08815 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D ACIRUI_03765 asd; (GenBank) aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D ACIRUI_16410 dapA; (GenBank) 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D ACIRUI_16415 dapB; (GenBank) 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D ACIRUI_01725 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D ACIRUI_01780 dapF; (GenBank) diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D ACIRUI_06540 LL-diaminopimelate aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D ACIRUI_06190 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D ACIRUI_01785 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D ACIRUI_07585 murF; (GenBank) UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation
D ACIRUI_07820 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00220 Arginine biosynthesis [PATH:rfc00220]
D ACIRUI_10155 argF; (GenBank) ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D ACIRUI_01705 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D ACIRUI_03770 argH; (GenBank) argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D ACIRUI_06550 glnA; (GenBank) type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D ACIRUI_07195 glutamine synthetase III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D ACIRUI_08655 carB; (GenBank) carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D ACIRUI_08660 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D ACIRUI_06930 arcC; (GenBank) carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D ACIRUI_09385 gdhA; (GenBank) NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D ACIRUI_09275 pyridoxal phosphate-dependent aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D ACIRUI_05495 argJ; (GenBank) bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D ACIRUI_01715 GNAT family N-acetyltransferase K22477 argO; N-acetylglutamate synthase [EC:2.3.1.1]
D ACIRUI_01720 argB; (GenBank) acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D ACIRUI_01710 argC; (GenBank) N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D ACIRUI_01725 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:rfc00330]
D ACIRUI_15030 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D ACIRUI_15050 aguA; (GenBank) agmatine deiminase K10536 aguA; agmatine deiminase [EC:3.5.3.12]
D ACIRUI_15055 aguB; (GenBank) N-carbamoylputrescine amidase K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53]
D ACIRUI_15040 saccharopine dehydrogenase family protein K27502 capadh; carboxyaminopropylagmatine dehydrogenase [EC:1.5.1.55]
D ACIRUI_15045 nspC; (GenBank) carboxynorspermidine decarboxylase K27684 capadc; carboxyaminopropylagmatine decarboxylase [EC:4.1.1.127]
D ACIRUI_15035 speE; (GenBank) polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
D ACIRUI_05490 proC; (GenBank) pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D ACIRUI_02945 proB; (GenBank) glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D ACIRUI_02960 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D ACIRUI_09275 pyridoxal phosphate-dependent aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:rfc00340]
D ACIRUI_03145 hisG; (GenBank) ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D ACIRUI_03140 hisZ; (GenBank) ATP phosphoribosyltransferase regulatory subunit K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit
D ACIRUI_05030 hisH; (GenBank) imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D ACIRUI_03160 hisIE; (GenBank) bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D ACIRUI_05025 hisF; (GenBank) imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D ACIRUI_06555 hisA; (GenBank) phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D ACIRUI_03155 hisB; (GenBank) imidazoleglycerol-phosphate dehydratase HisB K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D ACIRUI_00720 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D ACIRUI_00575 histidinol-phosphatase HisJ family protein K04486 E3.1.3.15B; histidinol-phosphatase (PHP family) [EC:3.1.3.15]
D ACIRUI_08830 histidinol-phosphatase K04486 E3.1.3.15B; histidinol-phosphatase (PHP family) [EC:3.1.3.15]
D ACIRUI_03150 hisD; (GenBank) histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
C 00350 Tyrosine metabolism [PATH:rfc00350]
D ACIRUI_09275 pyridoxal phosphate-dependent aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D ACIRUI_00720 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D ACIRUI_07885 tyramine oxidase subunit B K25272 tynB; tyramine oxidase subunit B [EC:1.4.3.-]
C 00360 Phenylalanine metabolism [PATH:rfc00360]
D ACIRUI_01860 PaaI family thioesterase K02614 paaI; acyl-CoA thioesterase [EC:3.1.2.-]
D ACIRUI_07815 3-hydroxyacyl-CoA dehydrogenase family protein K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D ACIRUI_09275 pyridoxal phosphate-dependent aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D ACIRUI_00720 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D ACIRUI_00775 aldolase catalytic domain-containing protein K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
C 00380 Tryptophan metabolism
D ACIRUI_07820 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:rfc00400]
D ACIRUI_04410 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D ACIRUI_01420 aroB; (GenBank) 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D ACIRUI_04405 aroD; (GenBank) type I 3-dehydroquinate dehydratase K03785 aroD; 3-dehydroquinate dehydratase I [EC:4.2.1.10]
D ACIRUI_09480 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D ACIRUI_14870 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D ACIRUI_03560 aroA; (GenBank) 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D ACIRUI_04855 aroC; (GenBank) chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D ACIRUI_04605 trpE; (GenBank) anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D ACIRUI_04600 anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D ACIRUI_04575 trpD; (GenBank) anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D ACIRUI_04590 phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D ACIRUI_04595 trpC; (GenBank) indole-3-glycerol phosphate synthase TrpC K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D ACIRUI_04580 trpA; (GenBank) tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D ACIRUI_04585 trpB; (GenBank) tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D ACIRUI_02690 pheA; (GenBank) prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D ACIRUI_07090 ACT domain-containing protein K06209 pheB; chorismate mutase [EC:5.4.99.5]
D ACIRUI_03555 prephenate dehydrogenase/arogenate dehydrogenase family protein K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D ACIRUI_09275 pyridoxal phosphate-dependent aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D ACIRUI_00720 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:rfc00410]
D ACIRUI_12910 panD; (GenBank) aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D ACIRUI_12915 panC; (GenBank) pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D ACIRUI_07810 acyl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
C 00430 Taurine and hypotaurine metabolism [PATH:rfc00430]
D ACIRUI_06260 pta; (GenBank) phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D ACIRUI_01430 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:rfc00450]
D ACIRUI_06525 MalY/PatB family protein K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D ACIRUI_06290 homocysteine S-methyltransferase family protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D ACIRUI_08015 metE; (GenBank) 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D ACIRUI_13265 aminotransferase class V-fold PLP-dependent enzyme K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D ACIRUI_08415 NAD(P)/FAD-dependent oxidoreductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D ACIRUI_08465 sulfate adenylyltransferase subunit 1 K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D ACIRUI_08470 cysD; (GenBank) sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D ACIRUI_07445 selD; (GenBank) selenide, water dikinase SelD K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D ACIRUI_13025 metG; (GenBank) methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:rfc00460]
D ACIRUI_06365 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D ACIRUI_12635 glycoside hydrolase family 3 N-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D ACIRUI_16250 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D ACIRUI_00825 asnA; (GenBank) aspartate--ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D ACIRUI_15825 glyA; (GenBank) serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:rfc00470]
D ACIRUI_03485 alr; (GenBank) alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D ACIRUI_07590 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D ACIRUI_07280 murI; (GenBank) glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D ACIRUI_02005 murD; (GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D ACIRUI_01780 dapF; (GenBank) diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D ACIRUI_06190 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:rfc00480]
D ACIRUI_03115 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D ACIRUI_03505 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D ACIRUI_15035 speE; (GenBank) polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:rfc00520]
D ACIRUI_03750 UDP-N-acetylglucosamine pyrophosphorylase K28192 glmU; glucosamine-1-phosphate N-acetyltransferase [EC:2.3.1.157]
D ACIRUI_14875 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D ACIRUI_07220 murB; (GenBank) UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D ACIRUI_16315 GH36-type glycosyl hydrolase domain-containing protein K18675 chbP; N,N'-diacetylchitobiose phosphorylase [EC:2.4.1.280]
D ACIRUI_11580 nagA; (GenBank) N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D ACIRUI_07050 glmM; (GenBank) phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D ACIRUI_09915 nagB; (GenBank) glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D ACIRUI_11585 nagB; (GenBank) glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D ACIRUI_07720 glmS; (GenBank) glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D ACIRUI_06735 carbohydrate kinase family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D ACIRUI_11985 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D ACIRUI_09840 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D ACIRUI_11075 right-handed parallel beta-helix repeat-containing protein K01209 abfA; alpha-L-arabinofuranosidase [EC:3.2.1.55]
D ACIRUI_12055 alpha-N-arabinofuranosidase K01209 abfA; alpha-L-arabinofuranosidase [EC:3.2.1.55]
D ACIRUI_12785 alpha-N-arabinofuranosidase K01209 abfA; alpha-L-arabinofuranosidase [EC:3.2.1.55]
D ACIRUI_06375 glycoside hydrolase family 43 protein K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37]
D ACIRUI_10985 glycoside hydrolase family 43 protein K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37]
D ACIRUI_11025 glycosyl hydrolase K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37]
D ACIRUI_09435 ROK family glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D ACIRUI_13925 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D ACIRUI_06960 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D ACIRUI_15085 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D ACIRUI_00705 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D ACIRUI_00710 galT; (GenBank) UDP-glucose--hexose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D ACIRUI_02730 galE; (GenBank) UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D ACIRUI_05920 glf; (GenBank) UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D ACIRUI_14245 glf; (GenBank) UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D ACIRUI_14455 glf; (GenBank) UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D ACIRUI_13615 sugar phosphate nucleotidyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D ACIRUI_13625 rfbF; (GenBank) glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D ACIRUI_03985 glgD; (GenBank) glucose-1-phosphate adenylyltransferase subunit GlgD K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D ACIRUI_03990 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D ACIRUI_14840 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D ACIRUI_14845 glgD; (GenBank) glucose-1-phosphate adenylyltransferase subunit GlgD K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D ACIRUI_13315 rfbA; (GenBank) glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
C 00541 Biosynthesis of various nucleotide sugars [PATH:rfc00541]
D ACIRUI_13655 neuB; (GenBank) N-acetylneuraminate synthase K18430 legI; N,N'-diacetyllegionaminate synthase [EC:2.5.1.101]
D ACIRUI_13615 sugar phosphate nucleotidyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D ACIRUI_13625 rfbF; (GenBank) glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D ACIRUI_13620 rfbG; (GenBank) CDP-glucose 4,6-dehydratase K01709 rfbG; CDP-glucose 4,6-dehydratase [EC:4.2.1.45]
D ACIRUI_13630 rfbH; (GenBank) lipopolysaccharide biosynthesis protein RfbH K12452 ascC; CDP-4-dehydro-6-deoxyglucose reductase, E1 [EC:1.17.1.1]
D ACIRUI_13315 rfbA; (GenBank) glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D ACIRUI_13305 rfbB; (GenBank) dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D ACIRUI_13320 rfbC; (GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D ACIRUI_13310 rfbD; (GenBank) dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:rfc00511]
D ACIRUI_08950 glycoside hydrolase family 2 TIM barrel-domain containing protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D ACIRUI_11575 glycoside hydrolase family 2 TIM barrel-domain containing protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D ACIRUI_16180 glycoside hydrolase family 2 TIM barrel-domain containing protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D ACIRUI_16185 beta-galactosidase small subunit K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D ACIRUI_16025 glycosyl hydrolase 2 galactose-binding domain-containing protein K01192 E3.2.1.25; beta-mannosidase [EC:3.2.1.25]
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis
C 00550 Peptidoglycan biosynthesis [PATH:rfc00550]
D ACIRUI_14875 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D ACIRUI_07220 murB; (GenBank) UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D ACIRUI_14835 murC; (GenBank) UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D ACIRUI_02005 murD; (GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D ACIRUI_01785 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D ACIRUI_07590 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D ACIRUI_07585 murF; (GenBank) UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D ACIRUI_02655 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D ACIRUI_01655 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D ACIRUI_00780 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D ACIRUI_10165 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D ACIRUI_07185 transglycosylase domain-containing protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D ACIRUI_09440 PBP1A family penicillin-binding protein K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
D ACIRUI_02010 FtsW/RodA/SpoVE family cell cycle protein K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D ACIRUI_03000 FtsW/RodA/SpoVE family cell cycle protein K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D ACIRUI_03315 FtsW/RodA/SpoVE family cell cycle protein K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D ACIRUI_01995 peptidoglycan D,D-transpeptidase FtsI family protein K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein)
D ACIRUI_02000 peptidoglycan D,D-transpeptidase FtsI family protein K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein)
D ACIRUI_03005 penicillin-binding transpeptidase domain-containing protein K05364 pbpA; penicillin-binding protein A
D ACIRUI_02845 D-alanyl-D-alanine carboxypeptidase family protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D ACIRUI_03305 D-alanyl-D-alanine carboxypeptidase family protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D ACIRUI_08935 D-alanyl-D-alanine carboxypeptidase family protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D ACIRUI_10800 D-alanyl-D-alanine carboxypeptidase family protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D ACIRUI_00900 D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D ACIRUI_01175 D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
C 00552 Teichoic acid biosynthesis [PATH:rfc00552]
D ACIRUI_01655 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D ACIRUI_06950 LCP family protein K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D ACIRUI_14920 LCP family protein K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D ACIRUI_07005 CDP-glycerol glycerophosphotransferase family protein K18704 tarL; CDP-ribitol ribitolphosphotransferase / teichoic acid ribitol-phosphate polymerase [EC:2.7.8.14 2.7.8.47]
D ACIRUI_07030 phosphorylcholine transferase LicD K07271 licD; lipopolysaccharide cholinephosphotransferase [EC:2.7.8.-]
D ACIRUI_14230 phosphorylcholine transferase LicD K07271 licD; lipopolysaccharide cholinephosphotransferase [EC:2.7.8.-]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:rfc00543]
D ACIRUI_08510 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D ACIRUI_07135
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:rfc00730]
D ACIRUI_05240 thiC; (GenBank) phosphomethylpyrimidine synthase ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D ACIRUI_16605 thiD; (GenBank) bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D ACIRUI_04915 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D ACIRUI_06300 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D ACIRUI_13225 nifS; (GenBank) cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D ACIRUI_04910 thiI; (GenBank) tRNA uracil 4-sulfurtransferase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D ACIRUI_15965 thiH; (GenBank) 2-iminoacetate synthase ThiH K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19]
D ACIRUI_03955 dxs; (GenBank) 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D ACIRUI_10845 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D ACIRUI_15960 thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10]
D ACIRUI_09160 thiM; (GenBank) hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D ACIRUI_09170 thiE; (GenBank) thiamine phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D ACIRUI_15970 thiamine phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D ACIRUI_00330 rsgA; (GenBank) ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D ACIRUI_00340 thiamine diphosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2]
D ACIRUI_14760 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:rfc00740]
D ACIRUI_06460 bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D ACIRUI_06470 ribD; (GenBank) bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D ACIRUI_06455 ribE; (GenBank) 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D ACIRUI_06465 riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D ACIRUI_02805 bifunctional riboflavin kinase/FAD synthetase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D ACIRUI_09160 thiM; (GenBank) hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D ACIRUI_04420 NUDIX domain-containing protein K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
C 00750 Vitamin B6 metabolism [PATH:rfc00750]
D ACIRUI_13290 pyridoxamine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D ACIRUI_04820 serC; (GenBank) 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D ACIRUI_03635 thrC; (GenBank) threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D ACIRUI_15980 pdxS; (GenBank) pyridoxal 5'-phosphate synthase lyase subunit PdxS K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6]
D ACIRUI_15975 pdxT; (GenBank) pyridoxal 5'-phosphate synthase glutaminase subunit PdxT K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6]
C 00760 Nicotinate and nicotinamide metabolism [PATH:rfc00760]
D ACIRUI_16050 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D ACIRUI_07710 nadA; (GenBank) quinolinate synthase NadA K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D ACIRUI_16055 nadC; (GenBank) carboxylating nicotinate-nucleotide diphosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D ACIRUI_02095 pncB; (GenBank) nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D ACIRUI_04550 purine-nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D ACIRUI_03205 nadD; (GenBank) nicotinate (nicotinamide) nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D ACIRUI_05270 nudC; (GenBank) NAD(+) diphosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D ACIRUI_00810 NAD(+) synthase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D ACIRUI_03090 CinA family protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D ACIRUI_10435 NAD-dependent protein deacylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D ACIRUI_03945 NAD(+)/NADH kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
C 00770 Pantothenate and CoA biosynthesis [PATH:rfc00770]
D ACIRUI_04825 ilvB; (GenBank) biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D ACIRUI_05435 ilvB; (GenBank) biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D ACIRUI_13485 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D ACIRUI_03680 ilvN; (GenBank) acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D ACIRUI_05430 ilvN; (GenBank) acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D ACIRUI_03675 ilvC; (GenBank) ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D ACIRUI_04830 ilvD; (GenBank) dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D ACIRUI_12920 panB; (GenBank) 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D ACIRUI_05810 ketopantoate reductase family protein K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D ACIRUI_12915 panC; (GenBank) pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D ACIRUI_10140 type III pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D ACIRUI_07755 coaBC; (GenBank) bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D ACIRUI_03100 coaD; (GenBank) pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D ACIRUI_05100 coaE; (GenBank) dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D ACIRUI_01660 4'-phosphopantetheinyl transferase family protein K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-]
D ACIRUI_16575 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D ACIRUI_12910 panD; (GenBank) aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
C 00780 Biotin metabolism [PATH:rfc00780]
D ACIRUI_09410 fabF; (GenBank) beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D ACIRUI_07730 ymfI; (GenBank) elongation factor P 5-aminopentanone reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D ACIRUI_09415 fabG; (GenBank) 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D ACIRUI_13555 SDR family NAD(P)-dependent oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D ACIRUI_09405 fabZ; (GenBank) 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D ACIRUI_13540 fabZ; (GenBank) 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D ACIRUI_05385 hydE; (GenBank) [FeFe] hydrogenase H-cluster radical SAM maturase HydE K01012 bioB; biotin synthase [EC:2.8.1.6]
D ACIRUI_14595 bioB; (GenBank) biotin synthase BioB K01012 bioB; biotin synthase [EC:2.8.1.6]
D ACIRUI_10150 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism
C 00790 Folate biosynthesis [PATH:rfc00790]
D ACIRUI_05445 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D ACIRUI_16555 bifunctional folylpolyglutamate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D ACIRUI_06460 bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D ACIRUI_07475 GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D ACIRUI_07490 moaC; (GenBank) cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D ACIRUI_07485 molybdenum cofactor biosynthesis protein B K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D ACIRUI_07415 NTP transferase domain-containing protein K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76]
C 00670 One carbon pool by folate [PATH:rfc00670]
D ACIRUI_05445 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D ACIRUI_03450 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D ACIRUI_03445 folD; (GenBank) bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D ACIRUI_15825 glyA; (GenBank) serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D ACIRUI_16475 purN; (GenBank) phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D ACIRUI_00680 phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D ACIRUI_06290 homocysteine S-methyltransferase family protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D ACIRUI_05450 thyA; (GenBank) thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D ACIRUI_01670 metF; (GenBank) methylenetetrahydrofolate reductase [NAD(P)H] K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D ACIRUI_11830 metF; (GenBank) methylenetetrahydrofolate reductase [NAD(P)H] K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D ACIRUI_02955 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
D ACIRUI_14885 metK; (GenBank) methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:rfc00860]
D ACIRUI_02390 gltX; (GenBank) glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D ACIRUI_00275 hemA; (GenBank) glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D ACIRUI_00270 hemL; (GenBank) glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D ACIRUI_00265 hemB; (GenBank) porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D ACIRUI_00280 hemC; (GenBank) hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D ACIRUI_00285 cobA; (GenBank) uroporphyrinogen-III C-methyltransferase K13542 cobA-hemD; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75]
D ACIRUI_00260 bifunctional precorrin-2 dehydrogenase/sirohydrochlorin ferrochelatase K24866 sirC; precorrin-2 dehydrogenase [EC:1.3.1.76]
D ACIRUI_09530 cobI; (GenBank) precorrin-2 C(20)-methyltransferase K02190 cbiK; sirohydrochlorin cobaltochelatase [EC:4.99.1.3]
D ACIRUI_09545 cobJ; (GenBank) precorrin-3B C(17)-methyltransferase K05934 cobJ; precorrin-3B C17-methyltransferase / cobalt-factor III methyltransferase [EC:2.1.1.131 2.1.1.272]
D ACIRUI_09555 cobM; (GenBank) precorrin-4 C(11)-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271]
D ACIRUI_09550 cobalt-precorrin 5A hydrolase K02189 cbiG; cobalt-precorrin 5A hydrolase [EC:3.7.1.12]
D ACIRUI_09560 cbiD; (GenBank) cobalt-precorrin-5B (C(1))-methyltransferase CbiD K02188 cbiD; cobalt-precorrin-5B (C1)-methyltransferase [EC:2.1.1.195]
D ACIRUI_09540 bifunctional cobalt-precorrin-7 (C(5))-methyltransferase/cobalt-precorrin-6B (C(15))-methyltransferase K00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase / cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196]
D ACIRUI_09565 precorrin-8X methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60]
D ACIRUI_09535 cobyrinate a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D ACIRUI_16405 cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D ACIRUI_13070 cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D ACIRUI_13115 cbiB; (GenBank) adenosylcobinamide-phosphate synthase CbiB K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D ACIRUI_13085 bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D ACIRUI_13090 adenosylcobinamide-GDP ribazoletransferase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D ACIRUI_13080 cobT; (GenBank) nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D ACIRUI_09570 pyridoxal phosphate-dependent aminotransferase K04720 cobD; threonine-phosphate decarboxylase [EC:4.1.1.81]
D ACIRUI_13560
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:rfc00900]
D ACIRUI_03955 dxs; (GenBank) 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D ACIRUI_10845 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D ACIRUI_02665 1-deoxy-D-xylulose-5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D ACIRUI_15390 ispD; (GenBank) 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D ACIRUI_15750 ispE; (GenBank) 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D ACIRUI_06255 ispF; (GenBank) 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D ACIRUI_02675 ispG; (GenBank) flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D ACIRUI_02890 ispH; (GenBank) 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D ACIRUI_07820 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D ACIRUI_03960 polyprenyl synthetase family protein K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D ACIRUI_02655 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D ACIRUI_10625 transketolase family protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D ACIRUI_10630 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D ACIRUI_13545 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D ACIRUI_13550 transketolase family protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D ACIRUI_13575 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D ACIRUI_13750 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D ACIRUI_13755 transketolase family protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:rfc00523]
D ACIRUI_13315 rfbA; (GenBank) glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D ACIRUI_13305 rfbB; (GenBank) dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D ACIRUI_13320 rfbC; (GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D ACIRUI_13310 rfbD; (GenBank) dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
D ACIRUI_13305 rfbB; (GenBank) dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:rfc00946]
D ACIRUI_06365 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D ACIRUI_12635 glycoside hydrolase family 3 N-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D ACIRUI_16250 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis [PATH:rfc00332]
D ACIRUI_02945 proB; (GenBank) glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D ACIRUI_02960 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:rfc00261]
D ACIRUI_08465 sulfate adenylyltransferase subunit 1 K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D ACIRUI_08470 cysD; (GenBank) sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D ACIRUI_08815 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D ACIRUI_03765 asd; (GenBank) aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D ACIRUI_16410 dapA; (GenBank) 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D ACIRUI_16415 dapB; (GenBank) 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:rfc00521]
D ACIRUI_09435 ROK family glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D ACIRUI_13925 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D ACIRUI_06960 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D ACIRUI_15085 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D ACIRUI_13315 rfbA; (GenBank) glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D ACIRUI_13305 rfbB; (GenBank) dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D ACIRUI_13320 rfbC; (GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D ACIRUI_13310 rfbD; (GenBank) dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D ACIRUI_09435 ROK family glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D ACIRUI_13925 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:rfc00525]
D ACIRUI_13315 rfbA; (GenBank) glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D ACIRUI_13305 rfbB; (GenBank) dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:rfc00401]
D ACIRUI_03555 prephenate dehydrogenase/arogenate dehydrogenase family protein K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D ACIRUI_09275 pyridoxal phosphate-dependent aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D ACIRUI_00720 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D ACIRUI_04605 trpE; (GenBank) anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D ACIRUI_04600 anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D ACIRUI_09420 fabD; (GenBank) ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D ACIRUI_07730 ymfI; (GenBank) elongation factor P 5-aminopentanone reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D ACIRUI_09415 fabG; (GenBank) 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D ACIRUI_13555 SDR family NAD(P)-dependent oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D ACIRUI_01450 acpP; (GenBank) acyl carrier protein K02078 acpP; acyl carrier protein
D ACIRUI_09430 acpP; (GenBank) acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:rfc00999]
D ACIRUI_14885 metK; (GenBank) methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D ACIRUI_06365 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D ACIRUI_12635 glycoside hydrolase family 3 N-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D ACIRUI_16250 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:rfc00362]
D ACIRUI_00775 aldolase catalytic domain-containing protein K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
D ACIRUI_00370 carboxymuconolactone decarboxylase family protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D ACIRUI_02865 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D ACIRUI_02860 biotin/lipoyl-containing protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D ACIRUI_07815 3-hydroxyacyl-CoA dehydrogenase family protein K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D ACIRUI_07820 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation
D ACIRUI_09270 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation
D ACIRUI_00490 P-loop NTPase K02588 nifH; nitrogenase iron protein NifH
D ACIRUI_00530 nitrogenase iron protein NifH K02588 nifH; nitrogenase iron protein NifH
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
D ACIRUI_00775 aldolase catalytic domain-containing protein K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
D ACIRUI_00775 aldolase catalytic domain-containing protein K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
C 00626 Naphthalene degradation
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:rfc03020]
D ACIRUI_14500 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D ACIRUI_14505 rpoC; (GenBank) DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D ACIRUI_14795 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D ACIRUI_03075 rpoZ; (GenBank) DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
D ACIRUI_06095 ATP-dependent DNA helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:rfc03010]
D ACIRUI_06130 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D ACIRUI_11510 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D ACIRUI_13775 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D ACIRUI_15405 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D ACIRUI_06120 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D ACIRUI_11520 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D ACIRUI_13795 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D ACIRUI_15420 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D ACIRUI_06125 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D ACIRUI_11515 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D ACIRUI_13780 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D ACIRUI_15410 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D ACIRUI_06200 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D ACIRUI_02625 rpsB; (GenBank) 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D ACIRUI_14685 rpsC; (GenBank) 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D ACIRUI_14790 rpsD; (GenBank) 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D ACIRUI_14740 rpsE; (GenBank) 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D ACIRUI_12930 rpsF; (GenBank) 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D ACIRUI_14515 rpsG; (GenBank) 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D ACIRUI_14725 rpsH; (GenBank) 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D ACIRUI_08300 rpsI; (GenBank) 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D ACIRUI_14650 rpsJ; (GenBank) 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D ACIRUI_14785 rpsK; (GenBank) 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D ACIRUI_14510 rpsL; (GenBank) 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D ACIRUI_14780 rpsM; (GenBank) 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D ACIRUI_14720 type Z 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D ACIRUI_02815 rpsO; (GenBank) 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D ACIRUI_01485 rpsP; (GenBank) 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D ACIRUI_14700 rpsQ; (GenBank) 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D ACIRUI_12940 rpsR; (GenBank) 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D ACIRUI_14675 rpsS; (GenBank) 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D ACIRUI_01760 rpsT; (GenBank) 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D ACIRUI_04520 rpsU; (GenBank) 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D ACIRUI_14485 rplA; (GenBank) 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D ACIRUI_14670 rplB; (GenBank) 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D ACIRUI_14655 rplC; (GenBank) 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D ACIRUI_14660 rplD; (GenBank) 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D ACIRUI_14715 rplE; (GenBank) 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D ACIRUI_14730 rplF; (GenBank) 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D ACIRUI_09615 rplI; (GenBank) 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D ACIRUI_14490 rplJ; (GenBank) 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D ACIRUI_14480 rplK; (GenBank) 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D ACIRUI_14495 rplL; (GenBank) 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D ACIRUI_08305 rplM; (GenBank) 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D ACIRUI_14705 rplN; (GenBank) 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D ACIRUI_14750 rplO; (GenBank) 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D ACIRUI_14690 rplP; (GenBank) 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D ACIRUI_14800 bL17 family ribosomal protein K02879 RP-L17; large subunit ribosomal protein L17
D ACIRUI_14735 rplR; (GenBank) 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D ACIRUI_01505 rplS; (GenBank) 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D ACIRUI_02715 rplT; (GenBank) 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D ACIRUI_03180 rplU; (GenBank) 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D ACIRUI_14680 rplV; (GenBank) 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D ACIRUI_14665 rplW; (GenBank) 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D ACIRUI_14710 rplX; (GenBank) 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D ACIRUI_03190 rpmA; (GenBank) 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D ACIRUI_03035 rpmB; (GenBank) 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D ACIRUI_14695 rpmC; (GenBank) 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D ACIRUI_14745 rpmD; (GenBank) 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D ACIRUI_01815 rpmE; (GenBank) 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D ACIRUI_01440 rpmF; (GenBank) 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D ACIRUI_14465 rpmG; (GenBank) 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D ACIRUI_11460 rpmH; (GenBank) 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D ACIRUI_02710 rpmI; (GenBank) 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D ACIRUI_14775 rpmJ; (GenBank) 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
C 00970 Aminoacyl-tRNA biosynthesis [PATH:rfc00970]
D ACIRUI_13790 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D ACIRUI_15415 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D ACIRUI_11375 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D ACIRUI_15460 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D ACIRUI_15530 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D ACIRUI_11525 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D ACIRUI_15425 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D ACIRUI_13800 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D ACIRUI_15445 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D ACIRUI_11530 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D ACIRUI_07175 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D ACIRUI_15540 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D ACIRUI_02735 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D ACIRUI_02750 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D ACIRUI_02760 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D ACIRUI_15430 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D ACIRUI_05185 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D ACIRUI_05470 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D ACIRUI_05475 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D ACIRUI_07305 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D ACIRUI_15525 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D ACIRUI_15535 tRNA-His K14226 tRNA-His; tRNA His
D ACIRUI_13785 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D ACIRUI_15645 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D ACIRUI_00180 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D ACIRUI_00185 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D ACIRUI_06185 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D ACIRUI_15455 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D ACIRUI_15640 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D ACIRUI_10825 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D ACIRUI_15545 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D ACIRUI_06280 tRNA-Met K14230 tRNA-Met; tRNA Met
D ACIRUI_13820 tRNA-Met K14230 tRNA-Met; tRNA Met
D ACIRUI_15440 tRNA-Ile K14230 tRNA-Met; tRNA Met
D ACIRUI_07300 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D ACIRUI_13825 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D ACIRUI_07725 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D ACIRUI_15520 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D ACIRUI_11505 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D ACIRUI_13725 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D ACIRUI_15395 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D ACIRUI_15400 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D ACIRUI_03790 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D ACIRUI_06205 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D ACIRUI_13810 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D ACIRUI_15435 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D ACIRUI_06115 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D ACIRUI_09370 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D ACIRUI_13815 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D ACIRUI_06285 tRNA-Val K14237 tRNA-Val; tRNA Val
D ACIRUI_13805 tRNA-Val K14237 tRNA-Val; tRNA Val
D ACIRUI_15450 tRNA-Val K14237 tRNA-Val; tRNA Val
D ACIRUI_02390 gltX; (GenBank) glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D ACIRUI_05785 gatA; (GenBank) Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D ACIRUI_05780 gatB; (GenBank) Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D ACIRUI_05790 gatC; (GenBank) Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D ACIRUI_01405 glutamine--tRNA ligase/YqeY domain fusion protein K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D ACIRUI_04535 alaS; (GenBank) alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D ACIRUI_05795 aspS; (GenBank) aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D ACIRUI_07545 aspS; (GenBank) aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D ACIRUI_15800 asnS; (GenBank) asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D ACIRUI_04775 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D ACIRUI_00470 thrS; (GenBank) threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D ACIRUI_15830 serS; (GenBank) serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D ACIRUI_06250 cysS; (GenBank) cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D ACIRUI_13025 metG; (GenBank) methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D ACIRUI_00300 fmt; (GenBank) methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D ACIRUI_06870 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D ACIRUI_03670 leuS; (GenBank) leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D ACIRUI_16105 ileS; (GenBank) isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D ACIRUI_10125 lysS; (GenBank) lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D ACIRUI_04490 argS; (GenBank) arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D ACIRUI_14010 proS; (GenBank) proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D ACIRUI_07550 hisS; (GenBank) histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D ACIRUI_03590 pheS; (GenBank) phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D ACIRUI_03585 pheT; (GenBank) phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D ACIRUI_13005 tyrS; (GenBank) tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D ACIRUI_14605 trpS; (GenBank) tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
D ACIRUI_01455 rnc; (GenBank) ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:rfc03060]
D ACIRUI_14755 secY; (GenBank) preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D ACIRUI_14470 secE; (GenBank) preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D ACIRUI_00635 secG; (GenBank) preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D ACIRUI_15820 protein translocase subunit SecDF K12257 secDF; SecD/SecF fusion protein
D ACIRUI_04840 yajC; (GenBank) preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D ACIRUI_08795 secA; (GenBank) preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D ACIRUI_01480 ffh; (GenBank) signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D ACIRUI_13935 ffs; (GenBank) signal recognition particle sRNA large type K01983 ffs; signal recognition particle 4.5S RNA
D ACIRUI_01465 ftsY; (GenBank) signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D ACIRUI_01510 lepB; (GenBank) signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D ACIRUI_07715 lepB; (GenBank) signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D ACIRUI_14940 lepB; (GenBank) signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D ACIRUI_03270 signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum [PATH:rfc04141]
D ACIRUI_05330 htpG; (GenBank) molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D ACIRUI_06655 Hsp20/alpha crystallin family protein K13993 HSP20; HSP20 family protein
D ACIRUI_10605 Hsp20/alpha crystallin family protein K13993 HSP20; HSP20 family protein
D ACIRUI_11950 Hsp20/alpha crystallin family protein K13993 HSP20; HSP20 family protein
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:rfc04122]
D ACIRUI_04915 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D ACIRUI_06300 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D ACIRUI_13225 nifS; (GenBank) cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D ACIRUI_13235 mnmA; (GenBank) tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D ACIRUI_07475 GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D ACIRUI_07490 moaC; (GenBank) cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D ACIRUI_07485 molybdenum cofactor biosynthesis protein B K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D ACIRUI_04910 thiI; (GenBank) tRNA uracil 4-sulfurtransferase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D ACIRUI_08440 thiS; (GenBank) sulfur carrier protein ThiS K03154 thiS; sulfur carrier protein
D ACIRUI_15955 thiS; (GenBank) sulfur carrier protein ThiS K03154 thiS; sulfur carrier protein
C 03050 Proteasome
C 03018 RNA degradation [PATH:rfc03018]
D ACIRUI_00620 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D ACIRUI_06450 eno; (GenBank) phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D ACIRUI_02820 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D ACIRUI_00640 rnr; (GenBank) ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D ACIRUI_09585 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D ACIRUI_11895 RecQ family ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D ACIRUI_01810 rho; (GenBank) transcription termination factor Rho K03628 rho; transcription termination factor Rho
D ACIRUI_04425 rny; (GenBank) ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-]
D ACIRUI_04880 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D ACIRUI_16200 pfkA; (GenBank) 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D ACIRUI_04945 dnaK; (GenBank) molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D ACIRUI_10640 dnaK; (GenBank) molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D ACIRUI_01635 groL; (GenBank) chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D ACIRUI_02700 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D ACIRUI_08860 ppk1; (GenBank) polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:rfc03030]
D ACIRUI_00660 exonuclease domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D ACIRUI_08360 PolC-type DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D ACIRUI_16195 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D ACIRUI_02680 PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D ACIRUI_13735 dnaX; (GenBank) DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D ACIRUI_10745 ATP-binding protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D ACIRUI_01755 holA; (GenBank) DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D ACIRUI_11470 dnaN; (GenBank) DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D ACIRUI_09610 dnaB; (GenBank) replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D ACIRUI_00205 dnaG; (GenBank) DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D ACIRUI_12935 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D ACIRUI_01520 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D ACIRUI_05105 polA; (GenBank) DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D ACIRUI_04390 ligA; (GenBank) NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:rfc03410]
D ACIRUI_15075 nth; (GenBank) endonuclease III domain-containing protein K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D ACIRUI_05020 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D ACIRUI_16040 mutY; (GenBank) A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D ACIRUI_11630 DNA-3-methyladenine glycosylase family protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D ACIRUI_02755 exodeoxyribonuclease III K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2]
D ACIRUI_01690 deoxyribonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D ACIRUI_05105 polA; (GenBank) DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D ACIRUI_05410 recJ; (GenBank) single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D ACIRUI_04390 ligA; (GenBank) NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:rfc03420]
D ACIRUI_14860 mfd; (GenBank) transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D ACIRUI_08695 uvrA; (GenBank) excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D ACIRUI_10510 ATP-binding cassette domain-containing protein K03701 uvrA; excinuclease ABC subunit A
D ACIRUI_08700 uvrB; (GenBank) excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D ACIRUI_07235 uvrC; (GenBank) excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D ACIRUI_00455 3'-5' exonuclease K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D ACIRUI_00850 pcrA; (GenBank) DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D ACIRUI_02395 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D ACIRUI_05105 polA; (GenBank) DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D ACIRUI_04390 ligA; (GenBank) NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D ACIRUI_06095 ATP-dependent DNA helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
C 03430 Mismatch repair [PATH:rfc03430]
D ACIRUI_03370 mutS; (GenBank) DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D ACIRUI_07525 endonuclease MutS2 K07456 mutS2; DNA mismatch repair protein MutS2
D ACIRUI_03365 mutL; (GenBank) DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D ACIRUI_00455 3'-5' exonuclease K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D ACIRUI_00850 pcrA; (GenBank) DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D ACIRUI_02395 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D ACIRUI_03970 xseA; (GenBank) exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D ACIRUI_03965 xseB; (GenBank) exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D ACIRUI_05410 recJ; (GenBank) single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D ACIRUI_12935 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D ACIRUI_16195 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D ACIRUI_02680 PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D ACIRUI_11470 dnaN; (GenBank) DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D ACIRUI_13735 dnaX; (GenBank) DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D ACIRUI_01755 holA; (GenBank) DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D ACIRUI_10745 ATP-binding protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D ACIRUI_00660 exonuclease domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D ACIRUI_08360 PolC-type DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D ACIRUI_04390 ligA; (GenBank) NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:rfc03440]
D ACIRUI_05410 recJ; (GenBank) single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D ACIRUI_12935 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D ACIRUI_11480 recF; (GenBank) DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF
D ACIRUI_04785 recO; (GenBank) DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D ACIRUI_13745 recR; (GenBank) recombination mediator RecR K06187 recR; recombination protein RecR
D ACIRUI_04435 recA; (GenBank) recombinase RecA K03553 recA; recombination protein RecA
D ACIRUI_05105 polA; (GenBank) DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D ACIRUI_02980 ruvA; (GenBank) Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D ACIRUI_02985 ruvB; (GenBank) Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D ACIRUI_03050 recG; (GenBank) ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D ACIRUI_08670 ATP-dependent RecD-like DNA helicase K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D ACIRUI_16195 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D ACIRUI_02680 PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D ACIRUI_11470 dnaN; (GenBank) DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D ACIRUI_13735 dnaX; (GenBank) DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D ACIRUI_01755 holA; (GenBank) DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D ACIRUI_10745 ATP-binding protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D ACIRUI_00660 exonuclease domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D ACIRUI_08360 PolC-type DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D ACIRUI_00290 priA; (GenBank) primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus and Alphavirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03273 Virion - Lassa virus and SFTS virus
C 03272 Virion - Hepatitis viruses
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:rfc02010]
D ACIRUI_08500 sulfate ABC transporter substrate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D ACIRUI_08495 cysT; (GenBank) sulfate ABC transporter permease subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D ACIRUI_08490 sulfate ABC transporter permease K02047 cysW; sulfate/thiosulfate transport system permease protein
D ACIRUI_08485 ABC transporter ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D ACIRUI_07465 modA; (GenBank) molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D ACIRUI_07460 modB; (GenBank) molybdate ABC transporter permease subunit K02018 modB; molybdate transport system permease protein
D ACIRUI_07455 sulfate/molybdate ABC transporter ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D ACIRUI_03815 PotD/PotF family extracellular solute-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D ACIRUI_03810 ABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein
D ACIRUI_03805 ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein
D ACIRUI_03800 ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D ACIRUI_01585 ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D ACIRUI_04530 extracellular solute-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D ACIRUI_09355 extracellular solute-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D ACIRUI_15170 extracellular solute-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D ACIRUI_09350 carbohydrate ABC transporter permease K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D ACIRUI_15175 carbohydrate ABC transporter permease K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D ACIRUI_09345 sugar ABC transporter permease K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D ACIRUI_15180 sugar ABC transporter permease K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D ACIRUI_07930 extracellular solute-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D ACIRUI_12720 ABC transporter substrate-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D ACIRUI_15110 ABC transporter substrate-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D ACIRUI_07945 carbohydrate ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D ACIRUI_12725 carbohydrate ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D ACIRUI_15115 carbohydrate ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D ACIRUI_07940 carbohydrate ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D ACIRUI_12730 carbohydrate ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D ACIRUI_15120 carbohydrate ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D ACIRUI_11560 ABC transporter substrate-binding protein K10188 lacE; lactose/L-arabinose transport system substrate-binding protein
D ACIRUI_11565 carbohydrate ABC transporter permease K10189 lacF; lactose/L-arabinose transport system permease protein
D ACIRUI_11570 carbohydrate ABC transporter permease K10190 lacG; lactose/L-arabinose transport system permease protein
D ACIRUI_06350 extracellular solute-binding protein K17318 lplA; putative aldouronate transport system substrate-binding protein
D ACIRUI_06415 extracellular solute-binding protein K17318 lplA; putative aldouronate transport system substrate-binding protein
D ACIRUI_06345 ABC transporter permease K17319 lplB; putative aldouronate transport system permease protein
D ACIRUI_12600 ABC transporter permease K17319 lplB; putative aldouronate transport system permease protein
D ACIRUI_06340 carbohydrate ABC transporter permease K17320 lplC; putative aldouronate transport system permease protein
D ACIRUI_12605 carbohydrate ABC transporter permease K17320 lplC; putative aldouronate transport system permease protein
D ACIRUI_13845 carbohydrate ABC transporter substrate-binding protein K10240 cebE; cellobiose transport system substrate-binding protein
D ACIRUI_16330 carbohydrate ABC transporter substrate-binding protein K10240 cebE; cellobiose transport system substrate-binding protein
D ACIRUI_16350 carbohydrate ABC transporter substrate-binding protein K10240 cebE; cellobiose transport system substrate-binding protein
D ACIRUI_13850 carbohydrate ABC transporter permease K10241 cebF; cellobiose transport system permease protein
D ACIRUI_16335 carbohydrate ABC transporter permease K10241 cebF; cellobiose transport system permease protein
D ACIRUI_13855 carbohydrate ABC transporter permease K10242 cebG; cellobiose transport system permease protein
D ACIRUI_16340 carbohydrate ABC transporter permease K10242 cebG; cellobiose transport system permease protein
D ACIRUI_01400 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D ACIRUI_16305 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D ACIRUI_09830 sugar ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D ACIRUI_09815 ABC transporter permease K10440 rbsC; ribose transport system permease protein
D ACIRUI_09825 ABC transporter permease K10440 rbsC; ribose transport system permease protein
D ACIRUI_09820 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D ACIRUI_12670 ABC transporter substrate-binding protein K23508 ytfQ; galactofuranose transport system substrate-binding protein
D ACIRUI_12685 ABC transporter substrate-binding protein K23508 ytfQ; galactofuranose transport system substrate-binding protein
D ACIRUI_12695 ABC transporter permease K23509 ytfT; galactofuranose transport system permease protein
D ACIRUI_12700 sugar ABC transporter permease YjfF K23509 ytfT; galactofuranose transport system permease protein
D ACIRUI_12690 sugar ABC transporter ATP-binding protein K10820 ytfR; galactofuranose transport system ATP-binding protein [EC:7.5.2.9]
D ACIRUI_08590 galactose ABC transporter substrate-binding protein K10540 mglB; methyl-galactoside transport system substrate-binding protein
D ACIRUI_08620 substrate-binding domain-containing protein K10540 mglB; methyl-galactoside transport system substrate-binding protein
D ACIRUI_08610 galactoside ABC transporter permease K10541 mglC; methyl-galactoside transport system permease protein
D ACIRUI_08615 sugar ABC transporter ATP-binding protein K10542 mglA; methyl-galactoside transport system ATP-binding protein [EC:7.5.2.11]
D ACIRUI_07695 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D ACIRUI_07690 pstC; (GenBank) phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D ACIRUI_07685 pstA; (GenBank) phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D ACIRUI_07645 pstB; (GenBank) phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D ACIRUI_03625 amino acid ABC transporter permease K17077 artQ; arginine/lysine/histidine transport system permease protein
D ACIRUI_03620 amino acid ABC transporter ATP-binding protein K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D ACIRUI_15670 ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D ACIRUI_15650 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D ACIRUI_15655 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D ACIRUI_15660 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D ACIRUI_15665 ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D ACIRUI_15735 metal ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein
D ACIRUI_15745 metal ABC transporter permease K09816 znuB; zinc transport system permease protein
D ACIRUI_15740 metal ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D ACIRUI_03570 biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component
D ACIRUI_08315 energy-coupling factor transporter transmembrane component T family protein K16785 ecfT; energy-coupling factor transport system permease protein
D ACIRUI_09675 energy-coupling factor transporter transmembrane component T family protein K16785 ecfT; energy-coupling factor transport system permease protein
D ACIRUI_08325 energy-coupling factor transporter ATPase K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D ACIRUI_08320 energy-coupling factor transporter ATPase K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D ACIRUI_05970 ABC transporter permease K09690 wzm; homopolymeric O-antigen transport system permease protein
D ACIRUI_07025 ABC transporter permease K09690 wzm; homopolymeric O-antigen transport system permease protein
D ACIRUI_05965 ABC transporter ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D ACIRUI_07020 ABC transporter ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D ACIRUI_08175 ABC transporter permease K19310 bcrB; bacitracin transport system permease protein
D ACIRUI_08180 ABC transporter permease K19310 bcrB; bacitracin transport system permease protein
D ACIRUI_08185 ABC transporter ATP-binding protein K19309 bcrA; bacitracin transport system ATP-binding protein
D ACIRUI_08140 ABC transporter permease K20461 nukG; lantibiotic transport system permease protein
D ACIRUI_08145 ABC transporter permease K20461 nukG; lantibiotic transport system permease protein
D ACIRUI_08150 ABC transporter ATP-binding protein K20459 nukF; lantibiotic transport system ATP-binding protein
D ACIRUI_09895 lantibiotic immunity ABC transporter MutE/EpiE family permease subunit K20491 nisE; lantibiotic transport system permease protein
D ACIRUI_09890 lantibiotic immunity ABC transporter MutG family permease subunit K20492 nisG; lantibiotic transport system permease protein
D ACIRUI_09900 lantibiotic protection ABC transporter ATP-binding protein K20490 nisF; lantibiotic transport system ATP-binding protein
D ACIRUI_08885 ABC transporter permease K16916 yydJ; putative peptide transport system permease protein
D ACIRUI_08890 ABC transporter ATP-binding protein K16917 yydI; putative peptide transport system ATP-binding protein
D ACIRUI_07115 ftsX; (GenBank) permease-like cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D ACIRUI_07120 ftsE; (GenBank) cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D ACIRUI_01550 ABC transporter ATP-binding protein K16921 ytrB; acetoin utilization transport system ATP-binding protein
D ACIRUI_12450 ABC transporter ATP-binding protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D ACIRUI_12455 ABC transporter ATP-binding protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D ACIRUI_04000 ABC transporter ATP-binding protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D ACIRUI_03995 ABC transporter ATP-binding protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D ACIRUI_03840 ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D ACIRUI_05160 ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D ACIRUI_06725 ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D ACIRUI_03835 ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D ACIRUI_05155 ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D ACIRUI_06730 ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
C 02060 Phosphotransferase system (PTS) [PATH:rfc02060]
D ACIRUI_10515 ptsP; (GenBank) phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D ACIRUI_04905 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D ACIRUI_07315 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D ACIRUI_10520 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D ACIRUI_10525 fructose-specific PTS transporter subunit EIIC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D ACIRUI_10530 pfkB; (GenBank) 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
C 03070 Bacterial secretion system [PATH:rfc03070]
D ACIRUI_15820 protein translocase subunit SecDF K12257 secDF; SecD/SecF fusion protein
D ACIRUI_14470 secE; (GenBank) preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D ACIRUI_00635 secG; (GenBank) preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D ACIRUI_14755 secY; (GenBank) preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D ACIRUI_04840 yajC; (GenBank) preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D ACIRUI_08795 secA; (GenBank) preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D ACIRUI_01465 ftsY; (GenBank) signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D ACIRUI_01480 ffh; (GenBank) signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D ACIRUI_04305
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:rfc02020]
D ACIRUI_07635 response regulator transcription factor K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D ACIRUI_16645 response regulator transcription factor K07776 regX3; two-component system, OmpR family, response regulator RegX3
D ACIRUI_07695 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D ACIRUI_06940 S1C family serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D ACIRUI_07520 S1C family serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D ACIRUI_10250 flagellin K02406 fliC; flagellin
D ACIRUI_10415 flagellin K02406 fliC; flagellin
D ACIRUI_13465 flagellin K02406 fliC; flagellin
D ACIRUI_15295 flagellin K02406 fliC; flagellin
D ACIRUI_02605 FliA/WhiG family RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA
D ACIRUI_02505 motility protein A K02556 motA; chemotaxis protein MotA
D ACIRUI_00820 response regulator transcription factor K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D ACIRUI_11465 dnaA; (GenBank) chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D ACIRUI_01120 ABC transporter ATP-binding protein K11635 yxdL; putative ABC transport system ATP-binding protein
D ACIRUI_12240 sensor histidine kinase K18350 vanSC; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D ACIRUI_12230 vanR; (GenBank) VanR-ABDEGLN family response regulator transcription factor K18349 vanRC; two-component system, OmpR family, response regulator VanR
D ACIRUI_12335 vanR; (GenBank) VanR-ABDEGLN family response regulator transcription factor K18349 vanRC; two-component system, OmpR family, response regulator VanR
D ACIRUI_00900 D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D ACIRUI_01175 D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D ACIRUI_01015 ATP-binding protein K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D ACIRUI_09880 sensor histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D ACIRUI_01010 response regulator transcription factor K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
D ACIRUI_02330 response regulator transcription factor K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
D ACIRUI_09885 response regulator transcription factor K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
D ACIRUI_09900 lantibiotic protection ABC transporter ATP-binding protein K20490 nisF; lantibiotic transport system ATP-binding protein
D ACIRUI_09895 lantibiotic immunity ABC transporter MutE/EpiE family permease subunit K20491 nisE; lantibiotic transport system permease protein
D ACIRUI_09890 lantibiotic immunity ABC transporter MutG family permease subunit K20492 nisG; lantibiotic transport system permease protein
D ACIRUI_03830 spo0A; (GenBank) sporulation transcription factor Spo0A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A
D ACIRUI_12570 anaerobic C4-dicarboxylate transporter family protein K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB
D ACIRUI_01805 NADP-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D ACIRUI_05370 CidA/LrgA family protein K05338 lrgA; holin-like protein
D ACIRUI_00065 accessory gene regulator B family protein K07813 agrB; accessory gene regulator B
D ACIRUI_04095 accessory gene regulator ArgB-like protein K07813 agrB; accessory gene regulator B
D ACIRUI_04140 accessory gene regulator B family protein K07813 agrB; accessory gene regulator B
D ACIRUI_08045 accessory gene regulator B family protein K07813 agrB; accessory gene regulator B
D ACIRUI_08905 accessory gene regulator ArgB-like protein K07813 agrB; accessory gene regulator B
D ACIRUI_04100 cyclic lactone autoinducer peptide K07800 agrD; AgrD protein
D ACIRUI_04170 cyclic lactone autoinducer peptide K07800 agrD; AgrD protein
D ACIRUI_05655 cyclic lactone autoinducer peptide K07800 agrD; AgrD protein
D ACIRUI_08910 cyclic lactone autoinducer peptide K07800 agrD; AgrD protein
D ACIRUI_10420 carbon storage regulator K03563 csrA; carbon storage regulator
D ACIRUI_13970 csrA; (GenBank) carbon storage regulator CsrA K03563 csrA; carbon storage regulator
D ACIRUI_15290 carbon storage regulator K03563 csrA; carbon storage regulator
D ACIRUI_11415 ATP-binding protein K07777 degS; two-component system, NarL family, sensor histidine kinase DegS [EC:2.7.13.3]
D ACIRUI_10210 Flp1 family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA
D ACIRUI_06605 ATPase, T2SS/T4P/T4SS family K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D ACIRUI_10225 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D ACIRUI_10220 type II secretion system F family protein K12510 tadB; tight adherence protein B
D ACIRUI_10215 type II secretion system F family protein K12511 tadC; tight adherence protein C
D ACIRUI_00350 P-II family nitrogen regulator K04751 glnB; nitrogen regulatory protein P-II 1
D ACIRUI_07875 P-II family nitrogen regulator K04751 glnB; nitrogen regulatory protein P-II 1
D ACIRUI_06550 glnA; (GenBank) type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D ACIRUI_07195 glutamine synthetase III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D ACIRUI_07820 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D ACIRUI_03910 type II secretion system protein K02650 pilA; type IV pilus assembly protein PilA
D ACIRUI_02900 CheR family methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D ACIRUI_00565 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D ACIRUI_01875 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D ACIRUI_01940 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D ACIRUI_04525 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D ACIRUI_06445 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D ACIRUI_08855 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D ACIRUI_09335 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D ACIRUI_10900 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D ACIRUI_10970 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D ACIRUI_11135 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D ACIRUI_11865 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D ACIRUI_12750 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D ACIRUI_13120 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D ACIRUI_15785 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D ACIRUI_16310 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D ACIRUI_16360 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D ACIRUI_02585 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D ACIRUI_02580 chemotaxis protein CheW K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D ACIRUI_03610 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D ACIRUI_06225 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D ACIRUI_02575 cheB; (GenBank) chemotaxis-specific protein-glutamate methyltransferase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D ACIRUI_05040 chemotaxis protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D ACIRUI_07955 sensor histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D ACIRUI_08600 sensor histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D ACIRUI_12665 sensor histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D ACIRUI_06355 response regulator K07720 yesN; two-component system, response regulator YesN
D ACIRUI_08605 response regulator K07720 yesN; two-component system, response regulator YesN
D ACIRUI_12675 response regulator K07720 yesN; two-component system, response regulator YesN
D ACIRUI_05815 low molecular weight protein-tyrosine-phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D ACIRUI_09190 glycoside hydrolase family 5 protein K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D ACIRUI_13940 flgM; (GenBank) flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D ACIRUI_02335
D ACIRUI_12345
D ACIRUI_12595
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04082 Neuroactive ligand signaling
C 04081 Hormone signaling
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
D ACIRUI_16025 glycosyl hydrolase 2 galactose-binding domain-containing protein K01192 E3.2.1.25; beta-mannosidase [EC:3.2.1.25]
C 04146 Peroxisome [PATH:rfc04146]
D ACIRUI_05270 nudC; (GenBank) NAD(+) diphosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D ACIRUI_03505 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:rfc02024]
D ACIRUI_06925 S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D ACIRUI_04605 trpE; (GenBank) anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D ACIRUI_04600 anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D ACIRUI_04410 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D ACIRUI_00820 response regulator transcription factor K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D ACIRUI_12885 cellulase family glycosylhydrolase K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78]
D ACIRUI_06470 ribD; (GenBank) bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D ACIRUI_04100 cyclic lactone autoinducer peptide K07800 agrD; AgrD protein
D ACIRUI_04170 cyclic lactone autoinducer peptide K07800 agrD; AgrD protein
D ACIRUI_05655 cyclic lactone autoinducer peptide K07800 agrD; AgrD protein
D ACIRUI_08910 cyclic lactone autoinducer peptide K07800 agrD; AgrD protein
D ACIRUI_00065 accessory gene regulator B family protein K07813 agrB; accessory gene regulator B
D ACIRUI_04095 accessory gene regulator ArgB-like protein K07813 agrB; accessory gene regulator B
D ACIRUI_04140 accessory gene regulator B family protein K07813 agrB; accessory gene regulator B
D ACIRUI_08045 accessory gene regulator B family protein K07813 agrB; accessory gene regulator B
D ACIRUI_08905 accessory gene regulator ArgB-like protein K07813 agrB; accessory gene regulator B
D ACIRUI_15670 ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D ACIRUI_15650 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D ACIRUI_15655 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D ACIRUI_15660 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D ACIRUI_15665 ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D ACIRUI_15820 protein translocase subunit SecDF K12257 secDF; SecD/SecF fusion protein
D ACIRUI_14470 secE; (GenBank) preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D ACIRUI_00635 secG; (GenBank) preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D ACIRUI_14755 secY; (GenBank) preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D ACIRUI_04840 yajC; (GenBank) preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D ACIRUI_08795 secA; (GenBank) preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D ACIRUI_01465 ftsY; (GenBank) signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D ACIRUI_01480 ffh; (GenBank) signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D ACIRUI_03830 spo0A; (GenBank) sporulation transcription factor Spo0A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A
D ACIRUI_01015 ATP-binding protein K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D ACIRUI_09880 sensor histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D ACIRUI_01010 response regulator transcription factor K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
D ACIRUI_02330 response regulator transcription factor K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
D ACIRUI_09885 response regulator transcription factor K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
D ACIRUI_09900 lantibiotic protection ABC transporter ATP-binding protein K20490 nisF; lantibiotic transport system ATP-binding protein
D ACIRUI_09895 lantibiotic immunity ABC transporter MutE/EpiE family permease subunit K20491 nisE; lantibiotic transport system permease protein
D ACIRUI_09890 lantibiotic immunity ABC transporter MutG family permease subunit K20492 nisG; lantibiotic transport system permease protein
D ACIRUI_02335
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:rfc02030]
D ACIRUI_00565 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D ACIRUI_01875 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D ACIRUI_01940 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D ACIRUI_04525 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D ACIRUI_06445 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D ACIRUI_08855 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D ACIRUI_09335 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D ACIRUI_10900 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D ACIRUI_10970 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D ACIRUI_11135 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D ACIRUI_11865 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D ACIRUI_12750 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D ACIRUI_13120 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D ACIRUI_15785 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D ACIRUI_16310 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D ACIRUI_16360 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D ACIRUI_09830 sugar ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D ACIRUI_08590 galactose ABC transporter substrate-binding protein K10540 mglB; methyl-galactoside transport system substrate-binding protein
D ACIRUI_08620 substrate-binding domain-containing protein K10540 mglB; methyl-galactoside transport system substrate-binding protein
D ACIRUI_02580 chemotaxis protein CheW K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D ACIRUI_02585 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D ACIRUI_03610 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D ACIRUI_06225 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D ACIRUI_02590 chemotaxis protein CheC K03410 cheC; chemotaxis protein CheC
D ACIRUI_02575 cheB; (GenBank) chemotaxis-specific protein-glutamate methyltransferase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D ACIRUI_05040 chemotaxis protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D ACIRUI_02595 chemotaxis protein CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D ACIRUI_02900 CheR family methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D ACIRUI_02460 fliG; (GenBank) flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D ACIRUI_02520 fliM; (GenBank) flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D ACIRUI_02525 fliY; (GenBank) flagellar motor switch phosphatase FliY K02417 fliN; flagellar motor switch protein FliN
D ACIRUI_06220 chemotaxis protein CheC K02417 fliN; flagellar motor switch protein FliN
D ACIRUI_02505 motility protein A K02556 motA; chemotaxis protein MotA
D ACIRUI_02510 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:rfc02040]
D ACIRUI_02450 fliE; (GenBank) flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D ACIRUI_02455 flagellar M-ring protein FliF C-terminal domain-containing protein K02409 fliF; flagellar M-ring protein FliF
D ACIRUI_02460 fliG; (GenBank) flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D ACIRUI_02465 FliH/SctL family protein K02411 fliH; flagellar assembly protein FliH
D ACIRUI_02470 fliI; (GenBank) flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D ACIRUI_02475 fliJ; (GenBank) flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ
D ACIRUI_02485 flagellar hook-length control protein FliK K02414 fliK; flagellar hook-length control protein FliK
D ACIRUI_02520 fliM; (GenBank) flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D ACIRUI_02525 fliY; (GenBank) flagellar motor switch phosphatase FliY K02417 fliN; flagellar motor switch protein FliN
D ACIRUI_06220 chemotaxis protein CheC K02417 fliN; flagellar motor switch protein FliN
D ACIRUI_02530 flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D ACIRUI_02535 fliP; (GenBank) flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D ACIRUI_02540 fliQ; (GenBank) flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D ACIRUI_02545 fliR; (GenBank) flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D ACIRUI_02555 flhA; (GenBank) flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D ACIRUI_02550 flhB; (GenBank) flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D ACIRUI_02440 flgB; (GenBank) flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D ACIRUI_02445 flgC; (GenBank) flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D ACIRUI_02500 flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D ACIRUI_08685 flagellar hook-basal body protein K02391 flgF; flagellar basal-body rod protein FlgF
D ACIRUI_08680 flagellar hook-basal body protein K02392 flgG; flagellar basal-body rod protein FlgG
D ACIRUI_10250 flagellin K02406 fliC; flagellin
D ACIRUI_10415 flagellin K02406 fliC; flagellin
D ACIRUI_13465 flagellin K02406 fliC; flagellin
D ACIRUI_15295 flagellin K02406 fliC; flagellin
D ACIRUI_13980 fliD; (GenBank) flagellar filament capping protein FliD K02407 fliD; flagellar hook-associated protein 2
D ACIRUI_13985 fliS; (GenBank) flagellar export chaperone FliS K02422 fliS; flagellar secretion chaperone FliS
D ACIRUI_02505 motility protein A K02556 motA; chemotaxis protein MotA
D ACIRUI_02510 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D ACIRUI_13940 flgM; (GenBank) flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D ACIRUI_00210 rpoD; (GenBank) RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D ACIRUI_03705 rpoD; (GenBank) RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D ACIRUI_02605 FliA/WhiG family RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D ACIRUI_00620 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D ACIRUI_06450 eno; (GenBank) phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04981 Folate transport and metabolism [PATH:rfc04981]
D ACIRUI_02955 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
D ACIRUI_05445 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D ACIRUI_15825 glyA; (GenBank) serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D ACIRUI_05450 thyA; (GenBank) thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D ACIRUI_06290 homocysteine S-methyltransferase family protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04980 Cobalamin transport and metabolism
D ACIRUI_06290 homocysteine S-methyltransferase family protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
C 04382 Cornified envelope formation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:rfc01501]
D ACIRUI_15670 ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D ACIRUI_15650 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D ACIRUI_15655 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D ACIRUI_15660 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D ACIRUI_15665 ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D ACIRUI_07790 M56 family metallopeptidase K02172 blaR1; bla regulator protein blaR1
D ACIRUI_07795 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D ACIRUI_12080 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D ACIRUI_12535 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D ACIRUI_12995 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D ACIRUI_06880 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D ACIRUI_07185 transglycosylase domain-containing protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D ACIRUI_09440 PBP1A family penicillin-binding protein K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
D ACIRUI_12540
D ACIRUI_13000
C 01502 Vancomycin resistance [PATH:rfc01502]
D ACIRUI_12240 sensor histidine kinase K18350 vanSC; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D ACIRUI_12230 vanR; (GenBank) VanR-ABDEGLN family response regulator transcription factor K18349 vanRC; two-component system, OmpR family, response regulator VanR
D ACIRUI_12335 vanR; (GenBank) VanR-ABDEGLN family response regulator transcription factor K18349 vanRC; two-component system, OmpR family, response regulator VanR
D ACIRUI_07590 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D ACIRUI_03485 alr; (GenBank) alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D ACIRUI_07585 murF; (GenBank) UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D ACIRUI_00780 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D ACIRUI_10165 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D ACIRUI_00900 D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D ACIRUI_01175 D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D ACIRUI_12345
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:rfc01503]
D ACIRUI_09950 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D ACIRUI_10275 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D ACIRUI_15495 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D ACIRUI_06940 S1C family serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D ACIRUI_07520 S1C family serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D ACIRUI_06880 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D ACIRUI_07140
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:rfc01000]
C 01001 Protein kinases [BR:rfc01001]
D ACIRUI_00325 pknB; (GenBank) Stk1 family PASTA domain-containing Ser/Thr kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D ACIRUI_06635 type II toxin-antitoxin system HipA family toxin K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D ACIRUI_14170 CpsD/CapB family tyrosine-protein kinase K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D ACIRUI_14915 CpsD/CapB family tyrosine-protein kinase K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D ACIRUI_12240 sensor histidine kinase K18350 vanSC; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D ACIRUI_01015 ATP-binding protein K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D ACIRUI_09880 sensor histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D ACIRUI_07630 ATP-binding protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D ACIRUI_11415 ATP-binding protein K07777 degS; two-component system, NarL family, sensor histidine kinase DegS [EC:2.7.13.3]
D ACIRUI_02580 chemotaxis protein CheW K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D ACIRUI_07955 sensor histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D ACIRUI_08600 sensor histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D ACIRUI_12665 sensor histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:rfc01009]
D ACIRUI_16200 pfkA; (GenBank) 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D ACIRUI_05330 htpG; (GenBank) molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D ACIRUI_00320 Stp1/IreP family PP2C-type Ser/Thr phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
C 01002 Peptidases and inhibitors [BR:rfc01002]
D ACIRUI_03270 signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D ACIRUI_03905 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D ACIRUI_10235 prepilin peptidase K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D ACIRUI_04995 gpr; (GenBank) GPR endopeptidase K06012 gpr; spore protease [EC:3.4.24.78]
D ACIRUI_09150 guaA; (GenBank) glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D ACIRUI_09305 NlpC/P60 family protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D ACIRUI_00610 purF; (GenBank) amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D ACIRUI_01865 gltB; (GenBank) glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D ACIRUI_07720 glmS; (GenBank) glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D ACIRUI_13860 asnB; (GenBank) asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D ACIRUI_15700 DJ-1 family glyoxalase III K03152 thiJ; protein deglycase [EC:3.5.1.124]
D ACIRUI_15945 bsh; (GenBank) choloylglycine hydrolase K01442 cbh; choloylglycine hydrolase [EC:3.5.1.24]
D ACIRUI_04230 class D sortase K07284 srtA; sortase A [EC:3.4.22.70]
D ACIRUI_00750 class B sortase K08600 srtB; sortase B [EC:3.4.22.71]
D ACIRUI_14930 srtB; (GenBank) class B sortase K08600 srtB; sortase B [EC:3.4.22.71]
D ACIRUI_12655 C69 family dipeptidase K08659 pepDA; dipeptidase [EC:3.4.-.-]
D ACIRUI_00065 accessory gene regulator B family protein K07813 agrB; accessory gene regulator B
D ACIRUI_04095 accessory gene regulator ArgB-like protein K07813 agrB; accessory gene regulator B
D ACIRUI_04140 accessory gene regulator B family protein K07813 agrB; accessory gene regulator B
D ACIRUI_08045 accessory gene regulator B family protein K07813 agrB; accessory gene regulator B
D ACIRUI_08905 accessory gene regulator ArgB-like protein K07813 agrB; accessory gene regulator B
D ACIRUI_00165 lysostaphin resistance A-like protein K07052 K07052; CAAX protease family protein
D ACIRUI_07265 lysostaphin resistance A-like protein K07052 K07052; CAAX protease family protein
D ACIRUI_01930 M14 family metallopeptidase K01308 yqgT; g-D-glutamyl-meso-diaminopimelate peptidase [EC:3.4.19.11]
D ACIRUI_00900 D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D ACIRUI_01175 D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D ACIRUI_04800 insulinase family protein K06972 PITRM1; presequence protease [EC:3.4.24.-]
D ACIRUI_10830 pepT; (GenBank) peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D ACIRUI_03115 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D ACIRUI_09295 methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D ACIRUI_05110 aminopeptidase P family protein K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D ACIRUI_07240 ftsH; (GenBank) ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D ACIRUI_14075 ftsH; (GenBank) ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D ACIRUI_02670 rseP; (GenBank) RIP metalloprotease RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D ACIRUI_07790 M56 family metallopeptidase K02172 blaR1; bla regulator protein blaR1
D ACIRUI_06940 S1C family serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D ACIRUI_07520 S1C family serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D ACIRUI_02845 D-alanyl-D-alanine carboxypeptidase family protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D ACIRUI_03305 D-alanyl-D-alanine carboxypeptidase family protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D ACIRUI_08935 D-alanyl-D-alanine carboxypeptidase family protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D ACIRUI_10800 D-alanyl-D-alanine carboxypeptidase family protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D ACIRUI_15715 clpP; (GenBank) ATP-dependent Clp endopeptidase proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D ACIRUI_06480 AAA family ATPase K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D ACIRUI_15725 lon; (GenBank) endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D ACIRUI_03225 lexA; (GenBank) transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D ACIRUI_01510 lepB; (GenBank) signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D ACIRUI_07715 lepB; (GenBank) signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D ACIRUI_14940 lepB; (GenBank) signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D ACIRUI_07110 S41 family peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D ACIRUI_03930 spoIVB; (GenBank) SpoIVB peptidase K06399 spoIVB; stage IV sporulation protein B [EC:3.4.21.116]
D ACIRUI_02995 DUF3656 domain-containing protein K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D ACIRUI_04865 U32 family peptidase K08303 prtC; U32 family peptidase [EC:3.4.-.-]
C 01003 Glycosyltransferases [BR:rfc01003]
D ACIRUI_03465 glgA; (GenBank) glycogen synthase GlgA K00703 glgA; starch synthase [EC:2.4.1.21]
D ACIRUI_03825 glgA; (GenBank) glycogen synthase GlgA K00703 glgA; starch synthase [EC:2.4.1.21]
D ACIRUI_07185 transglycosylase domain-containing protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D ACIRUI_09440 PBP1A family penicillin-binding protein K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
D ACIRUI_02010 FtsW/RodA/SpoVE family cell cycle protein K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D ACIRUI_03000 FtsW/RodA/SpoVE family cell cycle protein K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D ACIRUI_03315 FtsW/RodA/SpoVE family cell cycle protein K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:rfc01005]
D ACIRUI_06160 glycosyltransferase family 2 protein K12999 rgpI; glucosyltransferase [EC:2.4.1.-]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:rfc01011]
D ACIRUI_14875 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D ACIRUI_07220 murB; (GenBank) UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D ACIRUI_14835 murC; (GenBank) UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D ACIRUI_02005 murD; (GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D ACIRUI_01785 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D ACIRUI_07590 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D ACIRUI_03485 alr; (GenBank) alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D ACIRUI_07280 murI; (GenBank) glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D ACIRUI_00780 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D ACIRUI_10165 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D ACIRUI_01655 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D ACIRUI_07185 transglycosylase domain-containing protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D ACIRUI_09440 PBP1A family penicillin-binding protein K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
D ACIRUI_01995 peptidoglycan D,D-transpeptidase FtsI family protein K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein)
D ACIRUI_02000 peptidoglycan D,D-transpeptidase FtsI family protein K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein)
D ACIRUI_03005 penicillin-binding transpeptidase domain-containing protein K05364 pbpA; penicillin-binding protein A
D ACIRUI_02845 D-alanyl-D-alanine carboxypeptidase family protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D ACIRUI_03305 D-alanyl-D-alanine carboxypeptidase family protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D ACIRUI_08935 D-alanyl-D-alanine carboxypeptidase family protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D ACIRUI_10800 D-alanyl-D-alanine carboxypeptidase family protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D ACIRUI_02010 FtsW/RodA/SpoVE family cell cycle protein K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D ACIRUI_03000 FtsW/RodA/SpoVE family cell cycle protein K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D ACIRUI_03315 FtsW/RodA/SpoVE family cell cycle protein K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D ACIRUI_00900 D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D ACIRUI_01175 D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D ACIRUI_09305 NlpC/P60 family protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D ACIRUI_04230 class D sortase K07284 srtA; sortase A [EC:3.4.22.70]
D ACIRUI_00750 class B sortase K08600 srtB; sortase B [EC:3.4.22.71]
D ACIRUI_14930 srtB; (GenBank) class B sortase K08600 srtB; sortase B [EC:3.4.22.71]
D ACIRUI_09950 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D ACIRUI_10275 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D ACIRUI_15495 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:rfc01004]
D ACIRUI_09420 fabD; (GenBank) ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D ACIRUI_09395 beta-ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D ACIRUI_09410 fabF; (GenBank) beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D ACIRUI_07730 ymfI; (GenBank) elongation factor P 5-aminopentanone reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D ACIRUI_09415 fabG; (GenBank) 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D ACIRUI_13555 SDR family NAD(P)-dependent oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D ACIRUI_09405 fabZ; (GenBank) 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D ACIRUI_13540 fabZ; (GenBank) 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D ACIRUI_09425 fabK; (GenBank) enoyl-[acyl-carrier-protein] reductase FabK K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D ACIRUI_01445 plsX; (GenBank) phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D ACIRUI_01565 plsY; (GenBank) glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D ACIRUI_11405 glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D ACIRUI_03235 lysophospholipid acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D ACIRUI_09330 lysophospholipid acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:rfc01006]
D ACIRUI_03960 polyprenyl synthetase family protein K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D ACIRUI_02655 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D ACIRUI_03360 miaA; (GenBank) tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
C 01007 Amino acid related enzymes [BR:rfc01007]
D ACIRUI_02390 gltX; (GenBank) glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D ACIRUI_01405 glutamine--tRNA ligase/YqeY domain fusion protein K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D ACIRUI_13005 tyrS; (GenBank) tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D ACIRUI_14605 trpS; (GenBank) tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D ACIRUI_06250 cysS; (GenBank) cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D ACIRUI_04490 argS; (GenBank) arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D ACIRUI_13025 metG; (GenBank) methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D ACIRUI_16105 ileS; (GenBank) isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D ACIRUI_06870 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D ACIRUI_03670 leuS; (GenBank) leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D ACIRUI_10125 lysS; (GenBank) lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D ACIRUI_05795 aspS; (GenBank) aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D ACIRUI_07545 aspS; (GenBank) aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D ACIRUI_15800 asnS; (GenBank) asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D ACIRUI_07550 hisS; (GenBank) histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D ACIRUI_04775 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D ACIRUI_15830 serS; (GenBank) serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D ACIRUI_14010 proS; (GenBank) proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D ACIRUI_00470 thrS; (GenBank) threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D ACIRUI_04535 alaS; (GenBank) alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D ACIRUI_03590 pheS; (GenBank) phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D ACIRUI_03585 pheT; (GenBank) phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D ACIRUI_09275 pyridoxal phosphate-dependent aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D ACIRUI_06540 LL-diaminopimelate aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D ACIRUI_08335 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K10907 K10907; aminotransferase [EC:2.6.1.-]
D ACIRUI_00720 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D ACIRUI_06525 MalY/PatB family protein K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D ACIRUI_01725 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D ACIRUI_00270 hemL; (GenBank) glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D ACIRUI_16575 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D ACIRUI_04820 serC; (GenBank) 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:rfc00194]
D ACIRUI_06790 atpC; (GenBank) ATP synthase F1 subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D ACIRUI_14145 atpC; (GenBank) ATP synthase F1 subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D ACIRUI_06795 atpD; (GenBank) F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D ACIRUI_14140 atpD; (GenBank) F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D ACIRUI_06800 atpG; (GenBank) ATP synthase F1 subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D ACIRUI_14135 atpG; (GenBank) ATP synthase F1 subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D ACIRUI_06805 atpA; (GenBank) F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D ACIRUI_14130 atpA; (GenBank) F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D ACIRUI_06810 atpH; (GenBank) ATP synthase F1 subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D ACIRUI_14125 atpH; (GenBank) ATP synthase F1 subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D ACIRUI_06815 atpF; (GenBank) F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D ACIRUI_14120 atpF; (GenBank) F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D ACIRUI_06820 atpE; (GenBank) ATP synthase F0 subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D ACIRUI_14115 atpE; (GenBank) ATP synthase F0 subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D ACIRUI_06825 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D ACIRUI_14110 atpB; (GenBank) F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:rfc03000]
D ACIRUI_04730 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D ACIRUI_04735 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D ACIRUI_14540 dcm; (GenBank) DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D ACIRUI_10535 DeoR/GlpR family DNA-binding transcription regulator K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D ACIRUI_09175 spoIIID; (GenBank) sporulation transcriptional regulator SpoIIID K06283 spoIIID; putative DeoR family transcriptional regulator, stage III sporulation protein D
D ACIRUI_12060 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D ACIRUI_13195 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D ACIRUI_13840 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D ACIRUI_15155 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D ACIRUI_16070 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D ACIRUI_09365 LacI family DNA-binding transcriptional regulator K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
D ACIRUI_11960 LacI family DNA-binding transcriptional regulator K03484 scrR; LacI family transcriptional regulator, sucrose operon repressor
D ACIRUI_09810 GntR family transcriptional regulator K02103 araR; GntR family transcriptional regulator, arabinose operon transcriptional repressor
D ACIRUI_12680 GntR family transcriptional regulator K02103 araR; GntR family transcriptional regulator, arabinose operon transcriptional repressor
D ACIRUI_12835 GntR family transcriptional regulator K02103 araR; GntR family transcriptional regulator, arabinose operon transcriptional repressor
D ACIRUI_12560 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D ACIRUI_15465 PLP-dependent aminotransferase family protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D ACIRUI_12960 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D ACIRUI_13885 transcriptional repressor K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator
D ACIRUI_13245 RrF2 family transcriptional regulator K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D ACIRUI_13220 RrF2 family transcriptional regulator K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor
D ACIRUI_10100 ArsR/SmtB family transcription factor K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D ACIRUI_15265 ArsR/SmtB family transcription factor K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor
D ACIRUI_11670 autorepressor SdpR family transcription factor K26993 sdpR; ArsR family transcriptional regulator, repressor of sdpIR and other operons
D ACIRUI_07830 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator
D ACIRUI_10690 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator
D ACIRUI_10715 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator
D ACIRUI_16000 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator
D ACIRUI_05170 metal-dependent transcriptional regulator K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D ACIRUI_07795 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D ACIRUI_12080 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D ACIRUI_12535 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D ACIRUI_12995 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D ACIRUI_10150 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D ACIRUI_01590 PucR family transcriptional regulator K02647 cdaR; carbohydrate diacid regulator
D ACIRUI_03500 redox-sensing transcriptional repressor Rex K01926 rex; redox-sensing transcriptional repressor
D ACIRUI_02435 codY; (GenBank) GTP-sensing pleiotropic transcriptional regulator CodY K03706 codY; transcriptional pleiotropic repressor
D ACIRUI_09205 helix-turn-helix domain-containing protein K07726 K07726; putative transcriptional regulator
D ACIRUI_06650 helix-turn-helix domain-containing protein K07727 K07727; putative transcriptional regulator
D ACIRUI_09765 helix-turn-helix transcriptional regulator K07729 K07729; putative transcriptional regulator
D ACIRUI_11110 helix-turn-helix transcriptional regulator K07729 K07729; putative transcriptional regulator
D ACIRUI_12530 helix-turn-helix transcriptional regulator K07729 K07729; putative transcriptional regulator
D ACIRUI_09200 metal-sensing transcriptional repressor K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D ACIRUI_07410 AbrB/MazE/SpoVT family DNA-binding domain-containing protein K04769 spoVT; AbrB family transcriptional regulator, stage V sporulation protein T
D ACIRUI_09445 stage V sporulation T C-terminal domain-containing protein K04769 spoVT; AbrB family transcriptional regulator, stage V sporulation protein T
D ACIRUI_11395 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D ACIRUI_03940 arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D ACIRUI_04955 hrcA; (GenBank) heat-inducible transcriptional repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D ACIRUI_06330 nrdR; (GenBank) transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR
D ACIRUI_01980 mraZ; (GenBank) division/cell wall cluster transcriptional repressor MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:rfc03021]
D ACIRUI_06095 ATP-dependent DNA helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
D ACIRUI_14795 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D ACIRUI_14500 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D ACIRUI_14505 rpoC; (GenBank) DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D ACIRUI_03075 rpoZ; (GenBank) DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D ACIRUI_00210 rpoD; (GenBank) RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D ACIRUI_03705 rpoD; (GenBank) RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D ACIRUI_00940 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D ACIRUI_07610 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D ACIRUI_07785 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D ACIRUI_08010 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D ACIRUI_09380 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D ACIRUI_10555 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D ACIRUI_10610 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D ACIRUI_11885 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D ACIRUI_14555 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D ACIRUI_15510 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D ACIRUI_02030 sigE; (GenBank) RNA polymerase sporulation sigma factor SigE K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D ACIRUI_02040 sigG; (GenBank) RNA polymerase sporulation sigma factor SigG K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D ACIRUI_02415 sigK; (GenBank) RNA polymerase sporulation sigma factor SigK K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D ACIRUI_06840 sigma-70 family RNA polymerase sigma factor K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D ACIRUI_06235 sigma-70 family RNA polymerase sigma factor K27000 sigH; RNA polymerase sigma-H factor
D ACIRUI_02605 FliA/WhiG family RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA
D ACIRUI_02770 nusA; (GenBank) transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D ACIRUI_03975 nusB; (GenBank) transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D ACIRUI_14475 nusG; (GenBank) transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D ACIRUI_01665 GreA/GreB family elongation factor K03624 greA; transcription elongation factor GreA
D ACIRUI_10130 greA; (GenBank) transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D ACIRUI_01810 rho; (GenBank) transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:rfc03019]
D ACIRUI_03175 ribonuclease E/G K08301 rng; ribonuclease G [EC:3.1.26.-]
D ACIRUI_01455 rnc; (GenBank) ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D ACIRUI_04880 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D ACIRUI_04425 rny; (GenBank) ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-]
D ACIRUI_00640 rnr; (GenBank) ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D ACIRUI_07515 3'-5' exoribonuclease YhaM family protein K03698 cbf; 3'-5' exoribonuclease [EC:3.1.-.-]
D ACIRUI_09585 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D ACIRUI_11895 RecQ family ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D ACIRUI_00620 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D ACIRUI_06450 eno; (GenBank) phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D ACIRUI_02820 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D ACIRUI_01810 rho; (GenBank) transcription termination factor Rho K03628 rho; transcription termination factor Rho
D ACIRUI_16200 pfkA; (GenBank) 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D ACIRUI_04945 dnaK; (GenBank) molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D ACIRUI_10640 dnaK; (GenBank) molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D ACIRUI_01635 groL; (GenBank) chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D ACIRUI_02700 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D ACIRUI_08860 ppk1; (GenBank) polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D ACIRUI_10420 carbon storage regulator K03563 csrA; carbon storage regulator
D ACIRUI_13970 csrA; (GenBank) carbon storage regulator CsrA K03563 csrA; carbon storage regulator
D ACIRUI_15290 carbon storage regulator K03563 csrA; carbon storage regulator
D ACIRUI_07215 rapZ; (GenBank) RNase adapter RapZ K06958 rapZ; RNase adapter protein RapZ
C 03041 Spliceosome
C 03011 Ribosome [BR:rfc03011]
D ACIRUI_06200 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D ACIRUI_02625 rpsB; (GenBank) 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D ACIRUI_14685 rpsC; (GenBank) 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D ACIRUI_14790 rpsD; (GenBank) 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D ACIRUI_14740 rpsE; (GenBank) 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D ACIRUI_12930 rpsF; (GenBank) 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D ACIRUI_14515 rpsG; (GenBank) 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D ACIRUI_14725 rpsH; (GenBank) 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D ACIRUI_08300 rpsI; (GenBank) 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D ACIRUI_14650 rpsJ; (GenBank) 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D ACIRUI_14785 rpsK; (GenBank) 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D ACIRUI_14510 rpsL; (GenBank) 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D ACIRUI_14780 rpsM; (GenBank) 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D ACIRUI_14720 type Z 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D ACIRUI_02815 rpsO; (GenBank) 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D ACIRUI_01485 rpsP; (GenBank) 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D ACIRUI_14700 rpsQ; (GenBank) 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D ACIRUI_12940 rpsR; (GenBank) 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D ACIRUI_14675 rpsS; (GenBank) 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D ACIRUI_01760 rpsT; (GenBank) 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D ACIRUI_04520 rpsU; (GenBank) 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D ACIRUI_14485 rplA; (GenBank) 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D ACIRUI_14670 rplB; (GenBank) 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D ACIRUI_14655 rplC; (GenBank) 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D ACIRUI_14660 rplD; (GenBank) 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D ACIRUI_14715 rplE; (GenBank) 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D ACIRUI_14730 rplF; (GenBank) 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D ACIRUI_09615 rplI; (GenBank) 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D ACIRUI_14490 rplJ; (GenBank) 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D ACIRUI_14480 rplK; (GenBank) 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D ACIRUI_14495 rplL; (GenBank) 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D ACIRUI_08305 rplM; (GenBank) 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D ACIRUI_14705 rplN; (GenBank) 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D ACIRUI_14750 rplO; (GenBank) 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D ACIRUI_14690 rplP; (GenBank) 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D ACIRUI_14800 bL17 family ribosomal protein K02879 RP-L17; large subunit ribosomal protein L17
D ACIRUI_14735 rplR; (GenBank) 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D ACIRUI_01505 rplS; (GenBank) 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D ACIRUI_02715 rplT; (GenBank) 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D ACIRUI_03180 rplU; (GenBank) 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D ACIRUI_14680 rplV; (GenBank) 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D ACIRUI_14665 rplW; (GenBank) 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D ACIRUI_14710 rplX; (GenBank) 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D ACIRUI_03190 rpmA; (GenBank) 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D ACIRUI_03035 rpmB; (GenBank) 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D ACIRUI_14695 rpmC; (GenBank) 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D ACIRUI_14745 rpmD; (GenBank) 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D ACIRUI_01815 rpmE; (GenBank) 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D ACIRUI_01440 rpmF; (GenBank) 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D ACIRUI_14465 rpmG; (GenBank) 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D ACIRUI_11460 rpmH; (GenBank) 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D ACIRUI_02710 rpmI; (GenBank) 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D ACIRUI_14775 rpmJ; (GenBank) 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D ACIRUI_06130 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D ACIRUI_11510 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D ACIRUI_13775 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D ACIRUI_15405 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D ACIRUI_06120 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D ACIRUI_11520 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D ACIRUI_13795 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D ACIRUI_15420 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D ACIRUI_06125 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D ACIRUI_11515 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D ACIRUI_13780 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D ACIRUI_15410 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 03009 Ribosome biogenesis [BR:rfc03009]
D ACIRUI_01455 rnc; (GenBank) ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D ACIRUI_04795 era; (GenBank) GTPase Era K03595 era; GTPase
D ACIRUI_03195 obgE; (GenBank) GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-]
D ACIRUI_02770 nusA; (GenBank) transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D ACIRUI_03975 nusB; (GenBank) transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D ACIRUI_14475 nusG; (GenBank) transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D ACIRUI_03120 pseudouridine synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D ACIRUI_09600 rsmA; (GenBank) 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D ACIRUI_00310 rsmB; (GenBank) 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D ACIRUI_04920 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D ACIRUI_11425 rsmG; (GenBank) 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D ACIRUI_01985 rsmH; (GenBank) 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D ACIRUI_09700 rsmH; (GenBank) 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D ACIRUI_10460 rsmI; (GenBank) 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D ACIRUI_03950 TlyA family RNA methyltransferase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D ACIRUI_06240 rlmB; (GenBank) 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D ACIRUI_03430 rlmH; (GenBank) 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D ACIRUI_14645 class I SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D ACIRUI_14960 class I SAM-dependent rRNA methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D ACIRUI_00315 rlmN; (GenBank) 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D ACIRUI_07510 rlmD; (GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D ACIRUI_14975 rlmD; (GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D ACIRUI_03130 RluA family pseudouridine synthase K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D ACIRUI_03265 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D ACIRUI_14005 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D ACIRUI_15070 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D ACIRUI_04395 rluF; (GenBank) 23S rRNA pseudouridine(2604) synthase RluF K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
D ACIRUI_15370 rimI; (GenBank) ribosomal protein S18-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D ACIRUI_13875 GNAT family N-acetyltransferase K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267]
D ACIRUI_01495 rimM; (GenBank) ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM
D ACIRUI_03080 rimO; (GenBank) 30S ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D ACIRUI_04925 prmA; (GenBank) 50S ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D ACIRUI_03175 ribonuclease E/G K08301 rng; ribonuclease G [EC:3.1.26.-]
D ACIRUI_04890 ruvX; (GenBank) Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D ACIRUI_06245 Mini-ribonuclease 3 K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-]
D ACIRUI_09585 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D ACIRUI_00330 rsgA; (GenBank) ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D ACIRUI_01560 der; (GenBank) ribosome biogenesis GTPase Der K03977 engA; GTPase
D ACIRUI_01515 ylqF; (GenBank) ribosome biogenesis GTPase YlqF K14540 rbgA; ribosome biogenesis GTPase A
D ACIRUI_16380 hflX; (GenBank) GTPase HflX K03665 hflX; GTPase
D ACIRUI_14095 L-threonylcarbamoyladenylate synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D ACIRUI_07570 RelA/SpoT family protein K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D ACIRUI_02790 rbfA; (GenBank) 30S ribosome-binding factor RbfA K02834 rbfA; ribosome-binding factor A
D ACIRUI_02765 rimP; (GenBank) ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP
D ACIRUI_11475 RNA-binding S4 domain-containing protein K14761 rlbA; ribosome-associated protein
D ACIRUI_03215 rsfS; (GenBank) ribosome silencing factor K09710 ybeB; ribosome-associated protein
D ACIRUI_03400 ybeY; (GenBank) rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor
D ACIRUI_03200 yhbY; (GenBank) ribosome assembly RNA-binding protein YhbY K07574 yhbY; RNA-binding protein
D ACIRUI_07600 hpf; (GenBank) ribosome hibernation-promoting factor, HPF/YfiA family K05808 hpf; ribosome hibernation promoting factor
D ACIRUI_06430 ychF; (GenBank) redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase
D ACIRUI_01435 YceD family protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:rfc03016]
D ACIRUI_15375 ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D ACIRUI_14020 CCA tRNA nucleotidyltransferase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D ACIRUI_02390 gltX; (GenBank) glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D ACIRUI_14010 proS; (GenBank) proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D ACIRUI_16105 ileS; (GenBank) isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D ACIRUI_03670 leuS; (GenBank) leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D ACIRUI_13025 metG; (GenBank) methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D ACIRUI_01405 glutamine--tRNA ligase/YqeY domain fusion protein K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D ACIRUI_04490 argS; (GenBank) arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D ACIRUI_10125 lysS; (GenBank) lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D ACIRUI_05795 aspS; (GenBank) aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D ACIRUI_07545 aspS; (GenBank) aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D ACIRUI_04535 alaS; (GenBank) alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D ACIRUI_15800 asnS; (GenBank) asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D ACIRUI_04775 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D ACIRUI_00470 thrS; (GenBank) threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D ACIRUI_15830 serS; (GenBank) serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D ACIRUI_06250 cysS; (GenBank) cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D ACIRUI_06870 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D ACIRUI_07550 hisS; (GenBank) histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D ACIRUI_03590 pheS; (GenBank) phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D ACIRUI_03585 pheT; (GenBank) phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D ACIRUI_13005 tyrS; (GenBank) tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D ACIRUI_14605 trpS; (GenBank) tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D ACIRUI_03255 dtd; (GenBank) D-aminoacyl-tRNA deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D ACIRUI_10170 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D ACIRUI_10805 trmB; (GenBank) tRNA (guanosine(46)-N7)-methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D ACIRUI_16260 tsaA; (GenBank) tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-]
D ACIRUI_05415 truA; (GenBank) tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D ACIRUI_08310 truA; (GenBank) tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D ACIRUI_02800 truB; (GenBank) tRNA pseudouridine(55) synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D ACIRUI_04915 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D ACIRUI_06300 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D ACIRUI_13225 nifS; (GenBank) cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D ACIRUI_14095 L-threonylcarbamoyladenylate synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D ACIRUI_03360 miaA; (GenBank) tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D ACIRUI_11435 mnmE; (GenBank) tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D ACIRUI_11430 mnmG; (GenBank) tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D ACIRUI_07445 selD; (GenBank) selenide, water dikinase SelD K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D ACIRUI_11455 rnpA; (GenBank) ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D ACIRUI_00225 rnpB; (GenBank) RNase P RNA component class A K01978 rnpB; RNase P catalytic RNA component
D ACIRUI_00130 RNA 2'-phosphotransferase K07559 kptA; putative RNA 2'-phosphotransferase [EC:2.7.1.-]
D ACIRUI_08395 ybaK; (GenBank) Cys-tRNA(Pro) deacylase K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D ACIRUI_13865 prolyl-tRNA synthetase associated domain-containing protein K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-]
D ACIRUI_13870 tadA; (GenBank) tRNA adenosine(34) deaminase TadA K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D ACIRUI_10135 dusB; (GenBank) tRNA dihydrouridine synthase DusB K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D ACIRUI_02965 miaB; (GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D ACIRUI_04900 mtaB; (GenBank) tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase MtaB K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
D ACIRUI_01500 trmD; (GenBank) tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D ACIRUI_00215 tRNA (adenine(22)-N(1))-methyltransferase K06967 trmK; tRNA (adenine22-N1)-methyltransferase [EC:2.1.1.217]
D ACIRUI_08330 tRNA (cytidine(34)-2'-O)-methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D ACIRUI_16215 TrmH family RNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family
D ACIRUI_13235 mnmA; (GenBank) tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D ACIRUI_03250 tRNA 2-thiocytidine biosynthesis TtcA family protein K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D ACIRUI_05175 ATP-binding protein K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D ACIRUI_03580 queA; (GenBank) tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D ACIRUI_03775 epoxyqueuosine reductase QueH K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6]
D ACIRUI_04845 tgt; (GenBank) tRNA guanosine(34) transglycosylase Tgt K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D ACIRUI_04910 thiI; (GenBank) tRNA uracil 4-sulfurtransferase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D ACIRUI_14065 tilS; (GenBank) tRNA lysidine(34) synthetase TilS K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D ACIRUI_15365 tsaB; (GenBank) tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D ACIRUI_15385 tsaD; (GenBank) tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D ACIRUI_15360 tsaE; (GenBank) tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D ACIRUI_05195 ThiF family adenylyltransferase K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D ACIRUI_01425 nucleotidyltransferase family protein K27343 tmcAL; tRNAmet cytidine acetate ligase [EC:6.3.1.22]
D ACIRUI_00640 rnr; (GenBank) ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D ACIRUI_02820 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:rfc03012]
D ACIRUI_02785 infB; (GenBank) translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D ACIRUI_02705 infC; (GenBank) translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D ACIRUI_07620 ABC-F family ATP-binding cassette domain-containing protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D ACIRUI_02630 tsf; (GenBank) translation elongation factor Ts K02357 tsf; elongation factor Ts
D ACIRUI_14525 tuf; (GenBank) elongation factor Tu K02358 tuf; elongation factor Tu
D ACIRUI_03545 elongation factor G K02355 fusA; elongation factor G
D ACIRUI_14520 fusA; (GenBank) elongation factor G K02355 fusA; elongation factor G
D ACIRUI_01830 prfA; (GenBank) peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D ACIRUI_02650 frr; (GenBank) ribosome recycling factor K02838 frr; ribosome recycling factor
D ACIRUI_01825 prmC; (GenBank) peptide chain release factor N(5)-glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D ACIRUI_14855 pth; (GenBank) aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D ACIRUI_14770 infA; (GenBank) translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D ACIRUI_06310 efp; (GenBank) elongation factor P K02356 efp; elongation factor P
D ACIRUI_07100 prfB; (GenBank) peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D ACIRUI_04445 peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
C 03110 Chaperones and folding catalysts [BR:rfc03110]
D ACIRUI_06625 clpB; (GenBank) ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D ACIRUI_06145 ATP-dependent Clp protease ATP-binding subunit K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D ACIRUI_05775 clpX; (GenBank) ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D ACIRUI_15720 clpX; (GenBank) ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D ACIRUI_05330 htpG; (GenBank) molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D ACIRUI_04945 dnaK; (GenBank) molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D ACIRUI_10640 dnaK; (GenBank) molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D ACIRUI_01635 groL; (GenBank) chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D ACIRUI_04940 dnaJ; (GenBank) molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D ACIRUI_00670 DnaJ C-terminal domain-containing protein K05516 cbpA; curved DNA-binding protein
D ACIRUI_00805 hslO; (GenBank) Hsp33 family molecular chaperone HslO K04083 hslO; molecular chaperone Hsp33
D ACIRUI_04950 grpE; (GenBank) nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D ACIRUI_06655 Hsp20/alpha crystallin family protein K13993 HSP20; HSP20 family protein
D ACIRUI_10605 Hsp20/alpha crystallin family protein K13993 HSP20; HSP20 family protein
D ACIRUI_11950 Hsp20/alpha crystallin family protein K13993 HSP20; HSP20 family protein
D ACIRUI_01630 groES; (GenBank) co-chaperone GroES K04078 groES; chaperonin GroES
D ACIRUI_06940 S1C family serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D ACIRUI_07520 S1C family serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D ACIRUI_07240 ftsH; (GenBank) ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D ACIRUI_14075 ftsH; (GenBank) ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D ACIRUI_06825 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D ACIRUI_14110 atpB; (GenBank) F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D ACIRUI_07580 peptidylprolyl isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D ACIRUI_04440 trxA; (GenBank) thioredoxin K03671 TXN; thioredoxin
D ACIRUI_08445 thioredoxin family protein K03671 TXN; thioredoxin
C 04131 Membrane trafficking [BR:rfc04131]
D ACIRUI_14560 flotillin family protein K07192 FLOT; flotillin
D ACIRUI_00580 gap; (GenBank) type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D ACIRUI_09460 pyk; (GenBank) pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D ACIRUI_05330 htpG; (GenBank) molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D ACIRUI_08840 MFS transporter K06902 UMF1; MFS transporter, UMF1 family
C 04121 Ubiquitin system
C 03051 Proteasome [BR:rfc03051]
D ACIRUI_05330 htpG; (GenBank) molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:rfc03032]
D ACIRUI_04730 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D ACIRUI_04735 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D ACIRUI_14540 dcm; (GenBank) DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D ACIRUI_14035 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D ACIRUI_11465 dnaA; (GenBank) chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D ACIRUI_09610 dnaB; (GenBank) replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D ACIRUI_00990 ATP-binding protein K02315 dnaC; DNA replication protein DnaC
D ACIRUI_14825 ATP-binding protein K02315 dnaC; DNA replication protein DnaC
D ACIRUI_00205 dnaG; (GenBank) DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D ACIRUI_12935 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D ACIRUI_16195 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D ACIRUI_02680 PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D ACIRUI_11470 dnaN; (GenBank) DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D ACIRUI_01755 holA; (GenBank) DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D ACIRUI_10745 ATP-binding protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D ACIRUI_00660 exonuclease domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D ACIRUI_08360 PolC-type DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D ACIRUI_13735 dnaX; (GenBank) DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D ACIRUI_01520 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D ACIRUI_05105 polA; (GenBank) DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D ACIRUI_04390 ligA; (GenBank) NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D ACIRUI_01600 DNA topoisomerase (ATP-hydrolyzing) subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D ACIRUI_11490 gyrA; (GenBank) DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D ACIRUI_01595 type IIA DNA topoisomerase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D ACIRUI_11485 gyrB; (GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D ACIRUI_02430 topA; (GenBank) type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D ACIRUI_03755 topoisomerase C-terminal repeat-containing protein K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:rfc03036]
D ACIRUI_04730 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D ACIRUI_04735 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D ACIRUI_14540 dcm; (GenBank) DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D ACIRUI_01455 rnc; (GenBank) ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D ACIRUI_14560 flotillin family protein K07192 FLOT; flotillin
D ACIRUI_06095 ATP-dependent DNA helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
D ACIRUI_14035 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D ACIRUI_00670 DnaJ C-terminal domain-containing protein K05516 cbpA; curved DNA-binding protein
D ACIRUI_11465 dnaA; (GenBank) chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D ACIRUI_12960 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D ACIRUI_01460 smc; (GenBank) chromosome segregation protein SMC K03529 smc; chromosome segregation protein
D ACIRUI_02835 segregation and condensation protein A K05896 scpA; segregation and condensation protein A
D ACIRUI_02840 scpB; (GenBank) SMC-Scp complex subunit ScpB K06024 scpB; segregation and condensation protein B
D ACIRUI_07120 ftsE; (GenBank) cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D ACIRUI_03455 DNA translocase FtsK 4TM domain-containing protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D ACIRUI_02010 FtsW/RodA/SpoVE family cell cycle protein K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D ACIRUI_03000 FtsW/RodA/SpoVE family cell cycle protein K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D ACIRUI_07115 ftsX; (GenBank) permease-like cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D ACIRUI_02020 ftsZ; (GenBank) cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D ACIRUI_02990 cell division protein ZapA K09888 zapA; cell division protein ZapA
D ACIRUI_09950 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D ACIRUI_10275 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D ACIRUI_15495 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D ACIRUI_10795 minC; (GenBank) septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D ACIRUI_03325 minD; (GenBank) septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D ACIRUI_10790 minD; (GenBank) septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D ACIRUI_03320 cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D ACIRUI_10785 minE; (GenBank) cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D ACIRUI_03280 cell division protein SepF K09772 sepF; cell division inhibitor SepF
D ACIRUI_03345 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D ACIRUI_08690 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D ACIRUI_03340 mreC; (GenBank) rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D ACIRUI_03335 mreD; (GenBank) rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D ACIRUI_03315 FtsW/RodA/SpoVE family cell cycle protein K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D ACIRUI_11400 ParA family protein K03496 parA; chromosome partitioning protein
D ACIRUI_11395 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D ACIRUI_11430 mnmG; (GenBank) tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D ACIRUI_11425 rsmG; (GenBank) 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D ACIRUI_01100 tyrosine-type recombinase/integrase K04763 xerD; integrase/recombinase XerD
D ACIRUI_01140 tyrosine-type recombinase/integrase K04763 xerD; integrase/recombinase XerD
D ACIRUI_05570 tyrosine-type recombinase/integrase K04763 xerD; integrase/recombinase XerD
D ACIRUI_10355 tyrosine-type recombinase/integrase K04763 xerD; integrase/recombinase XerD
D ACIRUI_15555 tyrosine-type recombinase/integrase K04763 xerD; integrase/recombinase XerD
D ACIRUI_07665 Fic family protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D ACIRUI_08975 fic; (GenBank) protein adenylyltransferase Fic K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D ACIRUI_09055 fic; (GenBank) protein adenylyltransferase Fic K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D ACIRUI_07210 whiA; (GenBank) DNA-binding protein WhiA K09762 whiA; cell division protein WhiA
C 03400 DNA repair and recombination proteins [BR:rfc03400]
D ACIRUI_05020 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D ACIRUI_16040 mutY; (GenBank) A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D ACIRUI_15075 nth; (GenBank) endonuclease III domain-containing protein K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D ACIRUI_06095 ATP-dependent DNA helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
D ACIRUI_09705 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D ACIRUI_01575 dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D ACIRUI_11630 DNA-3-methyladenine glycosylase family protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D ACIRUI_02755 exodeoxyribonuclease III K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2]
D ACIRUI_01690 deoxyribonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D ACIRUI_05410 recJ; (GenBank) single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D ACIRUI_04390 ligA; (GenBank) NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D ACIRUI_05105 polA; (GenBank) DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D ACIRUI_08695 uvrA; (GenBank) excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D ACIRUI_10510 ATP-binding cassette domain-containing protein K03701 uvrA; excinuclease ABC subunit A
D ACIRUI_08700 uvrB; (GenBank) excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D ACIRUI_07235 uvrC; (GenBank) excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D ACIRUI_00455 3'-5' exonuclease K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D ACIRUI_00850 pcrA; (GenBank) DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D ACIRUI_02395 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D ACIRUI_14500 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D ACIRUI_14505 rpoC; (GenBank) DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D ACIRUI_14795 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D ACIRUI_03075 rpoZ; (GenBank) DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D ACIRUI_14860 mfd; (GenBank) transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D ACIRUI_03370 mutS; (GenBank) DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D ACIRUI_07525 endonuclease MutS2 K07456 mutS2; DNA mismatch repair protein MutS2
D ACIRUI_03365 mutL; (GenBank) DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D ACIRUI_03970 xseA; (GenBank) exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D ACIRUI_03965 xseB; (GenBank) exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D ACIRUI_16195 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D ACIRUI_02680 PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D ACIRUI_11470 dnaN; (GenBank) DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D ACIRUI_01755 holA; (GenBank) DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D ACIRUI_10745 ATP-binding protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D ACIRUI_00660 exonuclease domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D ACIRUI_08360 PolC-type DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D ACIRUI_13735 dnaX; (GenBank) DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D ACIRUI_12935 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D ACIRUI_14535 very short patch repair endonuclease K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
D ACIRUI_08670 ATP-dependent RecD-like DNA helicase K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D ACIRUI_04435 recA; (GenBank) recombinase RecA K03553 recA; recombination protein RecA
D ACIRUI_02980 ruvA; (GenBank) Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D ACIRUI_02985 ruvB; (GenBank) Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D ACIRUI_00290 priA; (GenBank) primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D ACIRUI_06135 radA; (GenBank) DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D ACIRUI_11480 recF; (GenBank) DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF
D ACIRUI_03050 recG; (GenBank) ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D ACIRUI_04785 recO; (GenBank) DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D ACIRUI_13745 recR; (GenBank) recombination mediator RecR K06187 recR; recombination protein RecR
D ACIRUI_03935 recN; (GenBank) DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D ACIRUI_03135 Holliday junction resolvase RecU K03700 recU; recombination protein U
D ACIRUI_05355 addA; (GenBank) helicase-exonuclease AddAB subunit AddA K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
D ACIRUI_05360 PD-(D/E)XK nuclease family protein K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
D ACIRUI_01600 DNA topoisomerase (ATP-hydrolyzing) subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D ACIRUI_11490 gyrA; (GenBank) DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D ACIRUI_01595 type IIA DNA topoisomerase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D ACIRUI_11485 gyrB; (GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D ACIRUI_02430 topA; (GenBank) type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D ACIRUI_14035 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D ACIRUI_11895 RecQ family ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D ACIRUI_07355 DNA methylase K03502 umuC; DNA polymerase V
D ACIRUI_03225 lexA; (GenBank) transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D ACIRUI_12280 dinD; (GenBank) DNA damage-inducible protein D K14623 dinD; DNA-damage-inducible protein D
D ACIRUI_04430 regulatory protein RecX K03565 recX; regulatory protein
D ACIRUI_02795 bifunctional oligoribonuclease/PAP phosphatase NrnA K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:rfc03029]
D ACIRUI_02785 infB; (GenBank) translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D ACIRUI_02705 infC; (GenBank) translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D ACIRUI_02630 tsf; (GenBank) translation elongation factor Ts K02357 tsf; elongation factor Ts
D ACIRUI_14525 tuf; (GenBank) elongation factor Tu K02358 tuf; elongation factor Tu
D ACIRUI_03545 elongation factor G K02355 fusA; elongation factor G
D ACIRUI_14520 fusA; (GenBank) elongation factor G K02355 fusA; elongation factor G
D ACIRUI_04795 era; (GenBank) GTPase Era K03595 era; GTPase
D ACIRUI_13005 tyrS; (GenBank) tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D ACIRUI_03670 leuS; (GenBank) leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D ACIRUI_05795 aspS; (GenBank) aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D ACIRUI_07545 aspS; (GenBank) aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D ACIRUI_04775 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D ACIRUI_04490 argS; (GenBank) arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D ACIRUI_05785 gatA; (GenBank) Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D ACIRUI_05780 gatB; (GenBank) Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D ACIRUI_05790 gatC; (GenBank) Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D ACIRUI_12935 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D ACIRUI_04945 dnaK; (GenBank) molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D ACIRUI_10640 dnaK; (GenBank) molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D ACIRUI_04950 grpE; (GenBank) nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D ACIRUI_01635 groL; (GenBank) chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D ACIRUI_01630 groES; (GenBank) co-chaperone GroES K04078 groES; chaperonin GroES
D ACIRUI_04940 dnaJ; (GenBank) molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D ACIRUI_04915 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D ACIRUI_06300 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D ACIRUI_13225 nifS; (GenBank) cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D ACIRUI_05330 htpG; (GenBank) molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:rfc02000]
D ACIRUI_12450 ABC transporter ATP-binding protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D ACIRUI_12455 ABC transporter ATP-binding protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D ACIRUI_04000 ABC transporter ATP-binding protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D ACIRUI_03995 ABC transporter ATP-binding protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D ACIRUI_03840 ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D ACIRUI_05160 ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D ACIRUI_06725 ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D ACIRUI_03835 ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D ACIRUI_05155 ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D ACIRUI_06730 ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D ACIRUI_04515 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D ACIRUI_05635 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D ACIRUI_03550 ABC-F family ATP-binding cassette domain-containing protein K15738 uup; ABC transport system ATP-binding/permease protein
D ACIRUI_08500 sulfate ABC transporter substrate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D ACIRUI_08495 cysT; (GenBank) sulfate ABC transporter permease subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D ACIRUI_08490 sulfate ABC transporter permease K02047 cysW; sulfate/thiosulfate transport system permease protein
D ACIRUI_08485 ABC transporter ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D ACIRUI_07465 modA; (GenBank) molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D ACIRUI_07460 modB; (GenBank) molybdate ABC transporter permease subunit K02018 modB; molybdate transport system permease protein
D ACIRUI_07455 sulfate/molybdate ABC transporter ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D ACIRUI_03815 PotD/PotF family extracellular solute-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D ACIRUI_03810 ABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein
D ACIRUI_03805 ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein
D ACIRUI_03800 ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D ACIRUI_01585 ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D ACIRUI_13180 ABC transporter substrate-binding protein K25086 musE; maltose transport system substrate-binding protein
D ACIRUI_13185 carbohydrate ABC transporter permease K25087 musF; maltose transport system permease protein
D ACIRUI_13190 carbohydrate ABC transporter permease K25088 musG; maltose transport system permease protein
D ACIRUI_04530 extracellular solute-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D ACIRUI_09355 extracellular solute-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D ACIRUI_15170 extracellular solute-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D ACIRUI_09350 carbohydrate ABC transporter permease K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D ACIRUI_15175 carbohydrate ABC transporter permease K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D ACIRUI_09345 sugar ABC transporter permease K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D ACIRUI_15180 sugar ABC transporter permease K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D ACIRUI_07930 extracellular solute-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D ACIRUI_12720 ABC transporter substrate-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D ACIRUI_15110 ABC transporter substrate-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D ACIRUI_07945 carbohydrate ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D ACIRUI_12725 carbohydrate ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D ACIRUI_15115 carbohydrate ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D ACIRUI_07940 carbohydrate ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D ACIRUI_12730 carbohydrate ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D ACIRUI_15120 carbohydrate ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D ACIRUI_13845 carbohydrate ABC transporter substrate-binding protein K10240 cebE; cellobiose transport system substrate-binding protein
D ACIRUI_16330 carbohydrate ABC transporter substrate-binding protein K10240 cebE; cellobiose transport system substrate-binding protein
D ACIRUI_16350 carbohydrate ABC transporter substrate-binding protein K10240 cebE; cellobiose transport system substrate-binding protein
D ACIRUI_13850 carbohydrate ABC transporter permease K10241 cebF; cellobiose transport system permease protein
D ACIRUI_16335 carbohydrate ABC transporter permease K10241 cebF; cellobiose transport system permease protein
D ACIRUI_13855 carbohydrate ABC transporter permease K10242 cebG; cellobiose transport system permease protein
D ACIRUI_16340 carbohydrate ABC transporter permease K10242 cebG; cellobiose transport system permease protein
D ACIRUI_11560 ABC transporter substrate-binding protein K10188 lacE; lactose/L-arabinose transport system substrate-binding protein
D ACIRUI_11565 carbohydrate ABC transporter permease K10189 lacF; lactose/L-arabinose transport system permease protein
D ACIRUI_11570 carbohydrate ABC transporter permease K10190 lacG; lactose/L-arabinose transport system permease protein
D ACIRUI_06350 extracellular solute-binding protein K17318 lplA; putative aldouronate transport system substrate-binding protein
D ACIRUI_06415 extracellular solute-binding protein K17318 lplA; putative aldouronate transport system substrate-binding protein
D ACIRUI_06345 ABC transporter permease K17319 lplB; putative aldouronate transport system permease protein
D ACIRUI_12600 ABC transporter permease K17319 lplB; putative aldouronate transport system permease protein
D ACIRUI_06340 carbohydrate ABC transporter permease K17320 lplC; putative aldouronate transport system permease protein
D ACIRUI_12605 carbohydrate ABC transporter permease K17320 lplC; putative aldouronate transport system permease protein
D ACIRUI_08590 galactose ABC transporter substrate-binding protein K10540 mglB; methyl-galactoside transport system substrate-binding protein
D ACIRUI_08620 substrate-binding domain-containing protein K10540 mglB; methyl-galactoside transport system substrate-binding protein
D ACIRUI_08610 galactoside ABC transporter permease K10541 mglC; methyl-galactoside transport system permease protein
D ACIRUI_08615 sugar ABC transporter ATP-binding protein K10542 mglA; methyl-galactoside transport system ATP-binding protein [EC:7.5.2.11]
D ACIRUI_09830 sugar ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D ACIRUI_09815 ABC transporter permease K10440 rbsC; ribose transport system permease protein
D ACIRUI_09825 ABC transporter permease K10440 rbsC; ribose transport system permease protein
D ACIRUI_09820 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D ACIRUI_12670 ABC transporter substrate-binding protein K23508 ytfQ; galactofuranose transport system substrate-binding protein
D ACIRUI_12685 ABC transporter substrate-binding protein K23508 ytfQ; galactofuranose transport system substrate-binding protein
D ACIRUI_12695 ABC transporter permease K23509 ytfT; galactofuranose transport system permease protein
D ACIRUI_12700 sugar ABC transporter permease YjfF K23509 ytfT; galactofuranose transport system permease protein
D ACIRUI_12690 sugar ABC transporter ATP-binding protein K10820 ytfR; galactofuranose transport system ATP-binding protein [EC:7.5.2.9]
D ACIRUI_11975 ABC transporter substrate-binding protein K25670 fusA; fructooligosaccharide transport system substrate-binding protein
D ACIRUI_11970 carbohydrate ABC transporter permease K25672 fusB; fructooligosaccharide transport system permease protein
D ACIRUI_01400 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D ACIRUI_16305 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D ACIRUI_12040 extracellular solute-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D ACIRUI_12805 ABC transporter substrate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D ACIRUI_11920 carbohydrate ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D ACIRUI_12045 carbohydrate ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D ACIRUI_12810 carbohydrate ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D ACIRUI_11925 carbohydrate ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D ACIRUI_12050 carbohydrate ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D ACIRUI_12815 carbohydrate ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D ACIRUI_07695 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D ACIRUI_07690 pstC; (GenBank) phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D ACIRUI_07685 pstA; (GenBank) phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D ACIRUI_07645 pstB; (GenBank) phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D ACIRUI_03625 amino acid ABC transporter permease K17077 artQ; arginine/lysine/histidine transport system permease protein
D ACIRUI_03620 amino acid ABC transporter ATP-binding protein K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D ACIRUI_06495 ABC transporter substrate-binding protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein
D ACIRUI_07860 ABC transporter substrate-binding protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein
D ACIRUI_06490 ABC transporter permease K05832 K05832; putative tryptophan/tyrosine transport system permease protein
D ACIRUI_07855 ABC transporter permease K05832 K05832; putative tryptophan/tyrosine transport system permease protein
D ACIRUI_06485 ABC transporter ATP-binding protein K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein
D ACIRUI_07850 ABC transporter ATP-binding protein K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein
D ACIRUI_06770 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D ACIRUI_06765 amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D ACIRUI_15670 ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D ACIRUI_15650 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D ACIRUI_15655 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D ACIRUI_15660 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D ACIRUI_15665 ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D ACIRUI_09870 ABC transporter substrate-binding protein K25034 btuF; cobalamin transport system substrate-binding protein
D ACIRUI_09865 FecCD family ABC transporter permease K25027 btuC; cobalamin transport system permease protein
D ACIRUI_09860 ABC transporter ATP-binding protein K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8]
D ACIRUI_15735 metal ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein
D ACIRUI_15745 metal ABC transporter permease K09816 znuB; zinc transport system permease protein
D ACIRUI_15740 metal ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D ACIRUI_03570 biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component
D ACIRUI_09685 ECF-type riboflavin transporter substrate-binding protein K16924 mtsT; energy-coupling factor transport system substrate-specific component
D ACIRUI_08315 energy-coupling factor transporter transmembrane component T family protein K16785 ecfT; energy-coupling factor transport system permease protein
D ACIRUI_09675 energy-coupling factor transporter transmembrane component T family protein K16785 ecfT; energy-coupling factor transport system permease protein
D ACIRUI_08325 energy-coupling factor transporter ATPase K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D ACIRUI_08320 energy-coupling factor transporter ATPase K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D ACIRUI_09680 ABC transporter ATP-binding protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D ACIRUI_05970 ABC transporter permease K09690 wzm; homopolymeric O-antigen transport system permease protein
D ACIRUI_07025 ABC transporter permease K09690 wzm; homopolymeric O-antigen transport system permease protein
D ACIRUI_05965 ABC transporter ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D ACIRUI_07020 ABC transporter ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D ACIRUI_08150 ABC transporter ATP-binding protein K20459 nukF; lantibiotic transport system ATP-binding protein
D ACIRUI_08140 ABC transporter permease K20461 nukG; lantibiotic transport system permease protein
D ACIRUI_08145 ABC transporter permease K20461 nukG; lantibiotic transport system permease protein
D ACIRUI_09895 lantibiotic immunity ABC transporter MutE/EpiE family permease subunit K20491 nisE; lantibiotic transport system permease protein
D ACIRUI_09890 lantibiotic immunity ABC transporter MutG family permease subunit K20492 nisG; lantibiotic transport system permease protein
D ACIRUI_09900 lantibiotic protection ABC transporter ATP-binding protein K20490 nisF; lantibiotic transport system ATP-binding protein
D ACIRUI_01945 ABC transporter ATP-binding protein K25152 gldA; gliding motility-associated transport system ATP-binding protein
D ACIRUI_08885 ABC transporter permease K16916 yydJ; putative peptide transport system permease protein
D ACIRUI_08890 ABC transporter ATP-binding protein K16917 yydI; putative peptide transport system ATP-binding protein
D ACIRUI_08175 ABC transporter permease K19310 bcrB; bacitracin transport system permease protein
D ACIRUI_08180 ABC transporter permease K19310 bcrB; bacitracin transport system permease protein
D ACIRUI_08185 ABC transporter ATP-binding protein K19309 bcrA; bacitracin transport system ATP-binding protein
D ACIRUI_01120 ABC transporter ATP-binding protein K11635 yxdL; putative ABC transport system ATP-binding protein
D ACIRUI_01550 ABC transporter ATP-binding protein K16921 ytrB; acetoin utilization transport system ATP-binding protein
D ACIRUI_07115 ftsX; (GenBank) permease-like cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D ACIRUI_07120 ftsE; (GenBank) cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D ACIRUI_01030 ABC transporter permease subunit K01992 ABC-2.P; ABC-2 type transport system permease protein
D ACIRUI_02060 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D ACIRUI_06700 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D ACIRUI_00100 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D ACIRUI_00920 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D ACIRUI_01040 ATP-binding cassette domain-containing protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D ACIRUI_01165 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D ACIRUI_02055 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D ACIRUI_06705 ATP-binding cassette domain-containing protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D ACIRUI_08000 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D ACIRUI_08090 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D ACIRUI_10310 ATP-binding cassette domain-containing protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D ACIRUI_10675 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D ACIRUI_11805 ATP-binding cassette domain-containing protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D ACIRUI_11820 ATP-binding cassette domain-containing protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D ACIRUI_12245 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D ACIRUI_12350 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D ACIRUI_00160 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D ACIRUI_01125 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein
D ACIRUI_07970 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein
D ACIRUI_08215 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D ACIRUI_08250 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein
D ACIRUI_09960 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D ACIRUI_12205 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D ACIRUI_12405 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D ACIRUI_15895 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D ACIRUI_00155 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D ACIRUI_07975 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D ACIRUI_08220 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D ACIRUI_08255 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D ACIRUI_09965 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D ACIRUI_11760 ATP-binding cassette domain-containing protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D ACIRUI_12200 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D ACIRUI_12400 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D ACIRUI_15010 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D ACIRUI_15890 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D ACIRUI_13250 sufC; (GenBank) Fe-S cluster assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D ACIRUI_00120 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D ACIRUI_00190 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D ACIRUI_00475 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D ACIRUI_00715 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D ACIRUI_01905 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D ACIRUI_02210 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D ACIRUI_04630 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D ACIRUI_05265 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D ACIRUI_05275 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D ACIRUI_05855 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D ACIRUI_06665 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D ACIRUI_07920 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D ACIRUI_08960 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D ACIRUI_10465 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D ACIRUI_11040 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D ACIRUI_11085 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D ACIRUI_11955 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D ACIRUI_12550 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D ACIRUI_12660 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D ACIRUI_14640 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D ACIRUI_15635 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D ACIRUI_16615 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D ACIRUI_04205 MFS transporter K08217 mef; MFS transporter, DHA3 family, macrolide efflux protein
D ACIRUI_08840 MFS transporter K06902 UMF1; MFS transporter, UMF1 family
D ACIRUI_10515 ptsP; (GenBank) phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D ACIRUI_04905 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D ACIRUI_07315 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D ACIRUI_10520 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D ACIRUI_10525 fructose-specific PTS transporter subunit EIIC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D ACIRUI_00345 ammonium transporter K03320 amt; ammonium transporter, Amt family
D ACIRUI_07190 ammonium transporter K03320 amt; ammonium transporter, Amt family
D ACIRUI_14810 mscL; (GenBank) large conductance mechanosensitive channel protein MscL K03282 mscL; large conductance mechanosensitive channel
D ACIRUI_04805 mechanosensitive ion channel family protein K03442 mscS; small conductance mechanosensitive channel
D ACIRUI_08425 mgtE; (GenBank) magnesium transporter K06213 mgtE; magnesium transporter
D ACIRUI_02505 motility protein A K02556 motA; chemotaxis protein MotA
D ACIRUI_02510 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D ACIRUI_14630 magnesium transporter CorA family protein K03284 corA; magnesium transporter
D ACIRUI_03475 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D ACIRUI_06565 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D ACIRUI_05370 CidA/LrgA family protein K05338 lrgA; holin-like protein
D ACIRUI_08945 glycoside-pentoside-hexuronide (GPH):cation symporter K11104 melB; melibiose permease
D ACIRUI_06880 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D ACIRUI_13710 EamA family transporter K08978 TC.BAT1; bacterial/archaeal transporter family protein
D ACIRUI_12570 anaerobic C4-dicarboxylate transporter family protein K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB
D ACIRUI_13015 calcium/sodium antiporter K07301 yrbG; cation:H+ antiporter
D ACIRUI_09655 putP; (GenBank) sodium/proline symporter PutP K11928 putP; sodium/proline symporter
D ACIRUI_04615 gltS; (GenBank) sodium/glutamate symporter K03312 gltS; glutamate:Na+ symporter, ESS family
D ACIRUI_00570 Na+/H+ antiporter NhaC family protein K18218 tet35; tetracycline resistance efflux pump
D ACIRUI_06505 TrkH family potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein
D ACIRUI_12005 TrkH family potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein
D ACIRUI_06510 trkA; (GenBank) Trk system potassium transporter TrkA K03499 trkA; trk/ktr system potassium uptake protein
D ACIRUI_12000 potassium channel family protein K03499 trkA; trk/ktr system potassium uptake protein
D ACIRUI_15340 uracil-xanthine permease family protein K02824 uraA; uracil permease
D ACIRUI_06500 NCS2 family permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D ACIRUI_04565 chloride channel protein K03281 clcA; chloride channel protein, CIC family
D ACIRUI_09740 chloride channel protein K03281 clcA; chloride channel protein, CIC family
D ACIRUI_07370 Nramp family divalent metal transporter K03322 mntH; manganese transport protein
D ACIRUI_05120 Na/Pi cotransporter family protein K03324 yjbB; phosphate:Na+ symporter
D ACIRUI_08865 Na/Pi cotransporter family protein K03324 yjbB; phosphate:Na+ symporter
D ACIRUI_05440 AEC family transporter K24180 mleP; malate permease and related proteins
D ACIRUI_09725 AEC family transporter K24180 mleP; malate permease and related proteins
D ACIRUI_08515 AzlC family ABC transporter permease K26605 azlC; branched chain amino acid efflux pump
D ACIRUI_08520 AzlD domain-containing protein K26606 azlD; branched chain amino acid efflux pump
D ACIRUI_15350 ECF transporter S component K23675 fmnP; riboflavin transporter
D ACIRUI_02010 FtsW/RodA/SpoVE family cell cycle protein K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D ACIRUI_03000 FtsW/RodA/SpoVE family cell cycle protein K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D ACIRUI_08365 manganese efflux pump MntP family protein K23242 mntP; manganese efflux pump family protein
D ACIRUI_13010 manganese efflux pump MntP family protein K23242 mntP; manganese efflux pump family protein
D ACIRUI_12710 carbon starvation protein A K06200 cstA; carbon starvation protein
D ACIRUI_02865 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D ACIRUI_02870 oxaloacetate decarboxylase subunit alpha K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D ACIRUI_02850 acyl-CoA carboxylase subunit beta K01604 mmdA; methylmalonyl-CoA decarboxylase subunit alpha [EC:7.2.4.3]
D ACIRUI_02860 biotin/lipoyl-containing protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D ACIRUI_14170 CpsD/CapB family tyrosine-protein kinase K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D ACIRUI_14915 CpsD/CapB family tyrosine-protein kinase K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D ACIRUI_14165 YveK family protein K19420 epsA; protein tyrosine kinase modulator
D ACIRUI_14910 YveK family protein K19420 epsA; protein tyrosine kinase modulator
D ACIRUI_05215 ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A
D ACIRUI_05220 ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A
D ACIRUI_00460 feoB; (GenBank) ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D ACIRUI_05210 feoB; (GenBank) ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
C 02044 Secretion system [BR:rfc02044]
D ACIRUI_03905 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D ACIRUI_03910 type II secretion system protein K02650 pilA; type IV pilus assembly protein PilA
D ACIRUI_03925 GspE/PulE family protein K02652 pilB; type IV pilus assembly protein PilB
D ACIRUI_03915 type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC
D ACIRUI_03920 type IV pilus twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D ACIRUI_10235 prepilin peptidase K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D ACIRUI_06605 ATPase, T2SS/T4P/T4SS family K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D ACIRUI_10225 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D ACIRUI_10220 type II secretion system F family protein K12510 tadB; tight adherence protein B
D ACIRUI_10215 type II secretion system F family protein K12511 tadC; tight adherence protein C
D ACIRUI_10210 Flp1 family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA
D ACIRUI_01730 helix-hairpin-helix domain-containing protein K02237 comEA; competence protein ComEA
D ACIRUI_14080 deoxycytidylate deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D ACIRUI_01750 DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC
D ACIRUI_02555 flhA; (GenBank) flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D ACIRUI_02550 flhB; (GenBank) flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D ACIRUI_01530 EscU/YscU/HrcU family type III secretion system export apparatus switch protein K04061 flhB2; flagellar biosynthesis protein
D ACIRUI_02455 flagellar M-ring protein FliF C-terminal domain-containing protein K02409 fliF; flagellar M-ring protein FliF
D ACIRUI_02465 FliH/SctL family protein K02411 fliH; flagellar assembly protein FliH
D ACIRUI_02470 fliI; (GenBank) flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D ACIRUI_02525 fliY; (GenBank) flagellar motor switch phosphatase FliY K02417 fliN; flagellar motor switch protein FliN
D ACIRUI_06220 chemotaxis protein CheC K02417 fliN; flagellar motor switch protein FliN
D ACIRUI_02530 flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D ACIRUI_02535 fliP; (GenBank) flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D ACIRUI_02540 fliQ; (GenBank) flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D ACIRUI_02545 fliR; (GenBank) flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D ACIRUI_08795 secA; (GenBank) preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D ACIRUI_15820 protein translocase subunit SecDF K12257 secDF; SecD/SecF fusion protein
D ACIRUI_14470 secE; (GenBank) preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D ACIRUI_00635 secG; (GenBank) preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D ACIRUI_14755 secY; (GenBank) preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D ACIRUI_01480 ffh; (GenBank) signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D ACIRUI_01465 ftsY; (GenBank) signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D ACIRUI_04840 yajC; (GenBank) preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
C 02042 Bacterial toxins [BR:rfc02042]
D ACIRUI_03475 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D ACIRUI_06565 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D ACIRUI_07375 hemolysin III family protein K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:rfc02022]
D ACIRUI_07635 response regulator transcription factor K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D ACIRUI_16645 response regulator transcription factor K07776 regX3; two-component system, OmpR family, response regulator RegX3
D ACIRUI_00820 response regulator transcription factor K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D ACIRUI_12240 sensor histidine kinase K18350 vanSC; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D ACIRUI_12230 vanR; (GenBank) VanR-ABDEGLN family response regulator transcription factor K18349 vanRC; two-component system, OmpR family, response regulator VanR
D ACIRUI_12335 vanR; (GenBank) VanR-ABDEGLN family response regulator transcription factor K18349 vanRC; two-component system, OmpR family, response regulator VanR
D ACIRUI_01015 ATP-binding protein K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D ACIRUI_09880 sensor histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D ACIRUI_01010 response regulator transcription factor K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
D ACIRUI_02330 response regulator transcription factor K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
D ACIRUI_09885 response regulator transcription factor K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
D ACIRUI_07630 ATP-binding protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D ACIRUI_11655 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator
D ACIRUI_11415 ATP-binding protein K07777 degS; two-component system, NarL family, sensor histidine kinase DegS [EC:2.7.13.3]
D ACIRUI_03830 spo0A; (GenBank) sporulation transcription factor Spo0A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A
D ACIRUI_02580 chemotaxis protein CheW K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D ACIRUI_03610 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D ACIRUI_06225 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D ACIRUI_02575 cheB; (GenBank) chemotaxis-specific protein-glutamate methyltransferase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D ACIRUI_05040 chemotaxis protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D ACIRUI_07955 sensor histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D ACIRUI_08600 sensor histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D ACIRUI_12665 sensor histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D ACIRUI_06355 response regulator K07720 yesN; two-component system, response regulator YesN
D ACIRUI_08605 response regulator K07720 yesN; two-component system, response regulator YesN
D ACIRUI_12675 response regulator K07720 yesN; two-component system, response regulator YesN
D ACIRUI_06545 ANTAR domain-containing response regulator K22010 pdtaR; two-component system, response regulator PdtaR
C 02035 Bacterial motility proteins [BR:rfc02035]
D ACIRUI_02580 chemotaxis protein CheW K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D ACIRUI_02585 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D ACIRUI_02590 chemotaxis protein CheC K03410 cheC; chemotaxis protein CheC
D ACIRUI_02595 chemotaxis protein CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D ACIRUI_02900 CheR family methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D ACIRUI_02575 cheB; (GenBank) chemotaxis-specific protein-glutamate methyltransferase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D ACIRUI_03610 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D ACIRUI_06225 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D ACIRUI_05040 chemotaxis protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D ACIRUI_00565 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D ACIRUI_01875 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D ACIRUI_01940 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D ACIRUI_04525 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D ACIRUI_06445 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D ACIRUI_08855 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D ACIRUI_09335 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D ACIRUI_10900 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D ACIRUI_10970 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D ACIRUI_11135 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D ACIRUI_11865 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D ACIRUI_12750 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D ACIRUI_13120 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D ACIRUI_15785 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D ACIRUI_16310 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D ACIRUI_16360 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D ACIRUI_02465 FliH/SctL family protein K02411 fliH; flagellar assembly protein FliH
D ACIRUI_02470 fliI; (GenBank) flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D ACIRUI_02475 fliJ; (GenBank) flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ
D ACIRUI_02530 flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D ACIRUI_02535 fliP; (GenBank) flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D ACIRUI_02540 fliQ; (GenBank) flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D ACIRUI_02545 fliR; (GenBank) flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D ACIRUI_02555 flhA; (GenBank) flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D ACIRUI_02550 flhB; (GenBank) flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D ACIRUI_02460 fliG; (GenBank) flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D ACIRUI_02520 fliM; (GenBank) flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D ACIRUI_02525 fliY; (GenBank) flagellar motor switch phosphatase FliY K02417 fliN; flagellar motor switch protein FliN
D ACIRUI_06220 chemotaxis protein CheC K02417 fliN; flagellar motor switch protein FliN
D ACIRUI_02455 flagellar M-ring protein FliF C-terminal domain-containing protein K02409 fliF; flagellar M-ring protein FliF
D ACIRUI_02450 fliE; (GenBank) flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D ACIRUI_02485 flagellar hook-length control protein FliK K02414 fliK; flagellar hook-length control protein FliK
D ACIRUI_02440 flgB; (GenBank) flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D ACIRUI_02445 flgC; (GenBank) flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D ACIRUI_08685 flagellar hook-basal body protein K02391 flgF; flagellar basal-body rod protein FlgF
D ACIRUI_08680 flagellar hook-basal body protein K02392 flgG; flagellar basal-body rod protein FlgG
D ACIRUI_02500 flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D ACIRUI_09755 fliB; (GenBank) flagellin lysine-N-methylase K18475 fliB; lysine-N-methylase [EC:2.1.1.-]
D ACIRUI_10250 flagellin K02406 fliC; flagellin
D ACIRUI_10415 flagellin K02406 fliC; flagellin
D ACIRUI_13465 flagellin K02406 fliC; flagellin
D ACIRUI_15295 flagellin K02406 fliC; flagellin
D ACIRUI_13980 fliD; (GenBank) flagellar filament capping protein FliD K02407 fliD; flagellar hook-associated protein 2
D ACIRUI_13985 fliS; (GenBank) flagellar export chaperone FliS K02422 fliS; flagellar secretion chaperone FliS
D ACIRUI_02605 FliA/WhiG family RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA
D ACIRUI_02505 motility protein A K02556 motA; chemotaxis protein MotA
D ACIRUI_02510 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D ACIRUI_13965 fliW; (GenBank) flagellar assembly protein FliW K13626 fliW; flagellar assembly factor FliW
D ACIRUI_13940 flgM; (GenBank) flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D ACIRUI_13975 flagellar protein FlaG K06603 flaG; flagellar protein FlaG
D ACIRUI_02560 flhF; (GenBank) flagellar biosynthesis protein FlhF K02404 flhF; flagellar biosynthesis protein FlhF
D ACIRUI_02565 MinD/ParA family protein K04562 flhG; flagellar biosynthesis protein FlhG
D ACIRUI_03920 type IV pilus twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D ACIRUI_03910 type II secretion system protein K02650 pilA; type IV pilus assembly protein PilA
D ACIRUI_03925 GspE/PulE family protein K02652 pilB; type IV pilus assembly protein PilB
D ACIRUI_03915 type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC
D ACIRUI_03905 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D ACIRUI_10210 Flp1 family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA
D ACIRUI_10235 prepilin peptidase K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D ACIRUI_06605 ATPase, T2SS/T4P/T4SS family K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D ACIRUI_10225 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:rfc04812]
D ACIRUI_03345 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D ACIRUI_08690 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D ACIRUI_04375 ParM/StbA family protein K18640 parM; plasmid segregation protein ParM
D ACIRUI_02020 ftsZ; (GenBank) cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D ACIRUI_10795 minC; (GenBank) septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D ACIRUI_03325 minD; (GenBank) septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D ACIRUI_10790 minD; (GenBank) septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D ACIRUI_03320 cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D ACIRUI_10785 minE; (GenBank) cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D ACIRUI_11400 ParA family protein K03496 parA; chromosome partitioning protein
D ACIRUI_11395 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:rfc04147]
D ACIRUI_05330 htpG; (GenBank) molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D ACIRUI_00620 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D ACIRUI_06450 eno; (GenBank) phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D ACIRUI_00580 gap; (GenBank) type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D ACIRUI_00585 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D ACIRUI_09460 pyk; (GenBank) pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D ACIRUI_14560 flotillin family protein K07192 FLOT; flotillin
D ACIRUI_01635 groL; (GenBank) chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D ACIRUI_04945 dnaK; (GenBank) molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D ACIRUI_10640 dnaK; (GenBank) molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D ACIRUI_09840 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D ACIRUI_06560 guaB; (GenBank) IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D ACIRUI_14525 tuf; (GenBank) elongation factor Tu K02358 tuf; elongation factor Tu
D ACIRUI_10170 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D ACIRUI_06830 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D ACIRUI_07820 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D ACIRUI_14760 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D ACIRUI_16265 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D ACIRUI_03770 argH; (GenBank) argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D ACIRUI_01705 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D ACIRUI_00705 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D ACIRUI_10365 glgB; (GenBank) 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D ACIRUI_13130 glpK; (GenBank) glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30]
D ACIRUI_06550 glnA; (GenBank) type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D ACIRUI_07195 glutamine synthetase III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D ACIRUI_00265 hemB; (GenBank) porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D ACIRUI_04815 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D ACIRUI_00680 phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D ACIRUI_07800 electron transfer flavoprotein subunit alpha/FixB family protein K03522 fixB; electron transfer flavoprotein alpha subunit
D ACIRUI_00590 tpiA; (GenBank) triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 02048 Prokaryotic defense system [BR:rfc02048]
D ACIRUI_04730 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D ACIRUI_04735 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D ACIRUI_14540 dcm; (GenBank) DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D ACIRUI_08725 site-specific DNA-methyltransferase K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D ACIRUI_03480 type II toxin-antitoxin system PemK/MazF family toxin K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D ACIRUI_04035 type II toxin-antitoxin system PemK/MazF family toxin K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D ACIRUI_01265 type II toxin-antitoxin system YafQ family toxin K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-]
D ACIRUI_00135 type II toxin-antitoxin system antitoxin, RelB/DinJ family K07473 dinJ; DNA-damage-inducible protein J
D ACIRUI_01270 type II toxin-antitoxin system RelB/DinJ family antitoxin K07473 dinJ; DNA-damage-inducible protein J
D ACIRUI_11160 type II toxin-antitoxin system RelB/DinJ family antitoxin K07473 dinJ; DNA-damage-inducible protein J
D ACIRUI_11150 Txe/YoeB family addiction module toxin K19158 yoeB; toxin YoeB [EC:3.1.-.-]
D ACIRUI_11145 type II toxin-antitoxin system Phd/YefM family antitoxin K19159 yefM; antitoxin YefM
D ACIRUI_06635 type II toxin-antitoxin system HipA family toxin K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D ACIRUI_10485 type II toxin-antitoxin system HicB family antitoxin K18843 hicB; antitoxin HicB
D ACIRUI_02020 ftsZ; (GenBank) cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D ACIRUI_03345 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D ACIRUI_08690 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D ACIRUI_02390 gltX; (GenBank) glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D ACIRUI_04915 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D ACIRUI_06300 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D ACIRUI_13225 nifS; (GenBank) cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:rfc01504]
D ACIRUI_00870 APH(3') family aminoglycoside O-phosphotransferase K19300 aph3-II; aminoglycoside 3'-phosphotransferase II [EC:2.7.1.95]
D ACIRUI_00570 Na+/H+ antiporter NhaC family protein K18218 tet35; tetracycline resistance efflux pump
D ACIRUI_09280 NYN domain-containing protein K18220 tetM; ribosomal protection tetracycline resistance protein
D ACIRUI_04205 MFS transporter K08217 mef; MFS transporter, DHA3 family, macrolide efflux protein
D ACIRUI_07790 M56 family metallopeptidase K02172 blaR1; bla regulator protein blaR1
D ACIRUI_07795 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D ACIRUI_12080 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D ACIRUI_12535 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D ACIRUI_12995 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D ACIRUI_00900 D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D ACIRUI_01175 D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D ACIRUI_12240 sensor histidine kinase K18350 vanSC; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D ACIRUI_12230 vanR; (GenBank) VanR-ABDEGLN family response regulator transcription factor K18349 vanRC; two-component system, OmpR family, response regulator VanR
D ACIRUI_12335 vanR; (GenBank) VanR-ABDEGLN family response regulator transcription factor K18349 vanRC; two-component system, OmpR family, response regulator VanR
D ACIRUI_06880 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:rfc03100]
D ACIRUI_13790 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D ACIRUI_15415 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D ACIRUI_11375 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D ACIRUI_15460 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D ACIRUI_15530 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D ACIRUI_11525 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D ACIRUI_15425 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D ACIRUI_13800 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D ACIRUI_15445 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D ACIRUI_11530 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D ACIRUI_07175 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D ACIRUI_15540 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D ACIRUI_02735 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D ACIRUI_02750 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D ACIRUI_02760 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D ACIRUI_15430 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D ACIRUI_05185 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D ACIRUI_05470 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D ACIRUI_05475 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D ACIRUI_07305 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D ACIRUI_15525 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D ACIRUI_15535 tRNA-His K14226 tRNA-His; tRNA His
D ACIRUI_13785 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D ACIRUI_15645 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D ACIRUI_00180 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D ACIRUI_00185 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D ACIRUI_06185 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D ACIRUI_15455 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D ACIRUI_15640 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D ACIRUI_10825 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D ACIRUI_15545 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D ACIRUI_06280 tRNA-Met K14230 tRNA-Met; tRNA Met
D ACIRUI_13820 tRNA-Met K14230 tRNA-Met; tRNA Met
D ACIRUI_15440 tRNA-Ile K14230 tRNA-Met; tRNA Met
D ACIRUI_07300 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D ACIRUI_13825 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D ACIRUI_07725 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D ACIRUI_15520 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D ACIRUI_11505 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D ACIRUI_13725 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D ACIRUI_15395 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D ACIRUI_15400 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D ACIRUI_03790 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D ACIRUI_06205 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D ACIRUI_13810 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D ACIRUI_15435 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D ACIRUI_06115 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D ACIRUI_09370 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D ACIRUI_13815 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D ACIRUI_06285 tRNA-Val K14237 tRNA-Val; tRNA Val
D ACIRUI_13805 tRNA-Val K14237 tRNA-Val; tRNA Val
D ACIRUI_15450 tRNA-Val K14237 tRNA-Val; tRNA Val
D ACIRUI_06130 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D ACIRUI_11510 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D ACIRUI_13775 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D ACIRUI_15405 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D ACIRUI_06120 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D ACIRUI_11520 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D ACIRUI_13795 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D ACIRUI_15420 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D ACIRUI_06125 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D ACIRUI_11515 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D ACIRUI_13780 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D ACIRUI_15410 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D ACIRUI_00225 rnpB; (GenBank) RNase P RNA component class A K01978 rnpB; RNase P catalytic RNA component
D ACIRUI_03600 ssrS; (GenBank) 6S RNA K28358 ssrS; RNA polymerase binding 6S RNA
D ACIRUI_13935 ffs; (GenBank) signal recognition particle sRNA large type K01983 ffs; signal recognition particle 4.5S RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D ACIRUI_15230 aldo/keto reductase K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-]
D ACIRUI_07425 (2Fe-2S)-binding protein K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3]
D ACIRUI_10930 bcp; (GenBank) thioredoxin-dependent thiol peroxidase K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D ACIRUI_04500 sulfide/dihydroorotate dehydrogenase-like FAD/NAD-binding protein K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D ACIRUI_00760 nrdG; (GenBank) anaerobic ribonucleoside-triphosphate reductase activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D ACIRUI_14000 pflA; (GenBank) pyruvate formate-lyase-activating protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D ACIRUI_05140 radical SAM protein K04070 pflX; putative pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D ACIRUI_15485 class I SAM-dependent RNA methyltransferase K07444 ypsC; putative N6-adenine-specific DNA methylase [EC:2.1.1.-]
D ACIRUI_05540 carbamoyltransferase K00612 nodU; carbamoyltransferase [EC:2.1.3.-]
D ACIRUI_08545 sugar O-acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79]
D ACIRUI_11125 sugar O-acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79]
D ACIRUI_11065 GNAT family N-acetyltransferase K03826 yiaC; putative acetyltransferase [EC:2.3.1.-]
D ACIRUI_11535 gnpA; (GenBank) 1,3-beta-galactosyl-N-acetylhexosamine phosphorylase K15533 K15533; 1,3-beta-galactosyl-N-acetylhexosamine phosphorylase [EC:2.4.1.211]
D ACIRUI_15130 glycosidase K16212 mgp; 4-O-beta-D-mannosyl-D-glucose phosphorylase [EC:2.4.1.281]
D ACIRUI_15135 glycosylase K18785 mp2; beta-1,4-mannooligosaccharide/beta-1,4-mannosyl-N-acetylglucosamine phosphorylase [EC:2.4.1.319 2.4.1.320]
D ACIRUI_01975 lgt; (GenBank) prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D ACIRUI_02940 FAD:protein FMN transferase K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D ACIRUI_12575 fructoselysine 6-kinase K10710 frlD; fructoselysine 6-kinase [EC:2.7.1.218]
D ACIRUI_03045 DAK2 domain-containing protein K07030 fakA; fatty acid kinase [EC:2.7.2.18]
D ACIRUI_01385 pap; (GenBank) polyphosphate:AMP phosphotransferase K23753 ppk2; AMP-polyphosphate phosphotransferase [EC:2.7.4.33]
D ACIRUI_11055 ltrA; (GenBank) group II intron reverse transcriptase/maturase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D ACIRUI_07060 cdaA; (GenBank) diadenylate cyclase CdaA K18672 dacA; diadenylate cyclase [EC:2.7.7.85]
D ACIRUI_06945 UTP--glucose-1-phosphate uridylyltransferase K11442 K11442; putative uridylyltransferase [EC:2.7.7.-]
D ACIRUI_06845 spoIIAB; (GenBank) anti-sigma F factor K06379 spoIIAB; stage II sporulation protein AB (anti-sigma F factor) [EC:2.7.11.1]
D ACIRUI_07230 hprK; (GenBank) HPr(Ser) kinase/phosphatase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-]
D ACIRUI_05830 O-acetyl-ADP-ribose deacetylase K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106]
D ACIRUI_05115 acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D ACIRUI_14155 CpsB/CapC family capsule biosynthesis tyrosine phosphatase K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D ACIRUI_14905 CpsB/CapC family capsule biosynthesis tyrosine phosphatase K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D ACIRUI_06320 YqeG family HAD IIIA-type phosphatase K07015 yqeG; putative phosphatase [EC:3.1.3.-]
D ACIRUI_09620 DHH family phosphoesterase K22927 gdpP; cyclic-di-AMP phosphodiesterase [EC:3.1.4.59]
D ACIRUI_13035 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D ACIRUI_00700 arabinogalactan endo-beta-1,4-galactanase K01224 E3.2.1.89; arabinogalactan endo-1,4-beta-galactosidase [EC:3.2.1.89]
D ACIRUI_06890 glycosyl hydrolase 53 family protein K01224 E3.2.1.89; arabinogalactan endo-1,4-beta-galactosidase [EC:3.2.1.89]
D ACIRUI_15165 arabinogalactan endo-beta-1,4-galactanase K01224 E3.2.1.89; arabinogalactan endo-1,4-beta-galactosidase [EC:3.2.1.89]
D ACIRUI_15185 glycosyl hydrolase 53 family protein K01224 E3.2.1.89; arabinogalactan endo-1,4-beta-galactosidase [EC:3.2.1.89]
D ACIRUI_12780 glycoside hydrolase family 43 protein K06113 abnA; arabinan endo-1,5-alpha-L-arabinosidase [EC:3.2.1.99]
D ACIRUI_12795 arabinan endo-1,5-alpha-L-arabinosidase K06113 abnA; arabinan endo-1,5-alpha-L-arabinosidase [EC:3.2.1.99]
D ACIRUI_06400 glycosyl hydrolase family 8 K15531 rexA; oligosaccharide reducing-end xylanase [EC:3.2.1.156]
D ACIRUI_05865 glycoside hydrolase family 172 protein K27494 exoMA1; D-arabinan exo alpha-(1,3)/(1,5)-arabinofuranosidase (non-reducing end) [EC:3.2.1.225]
D ACIRUI_16585 N-acetylmuramoyl-L-alanine amidase family protein K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D ACIRUI_00295 def; (GenBank) peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D ACIRUI_07345 polysaccharide deacetylase family protein K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D ACIRUI_08785 polysaccharide deacetylase family protein K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D ACIRUI_07160 RidA family protein K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D ACIRUI_02070 AAA family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D ACIRUI_10820 AAA family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D ACIRUI_14090 low molecular weight phosphatase family protein K20201 ywlE; protein arginine phosphatase [EC:3.9.1.2]
D ACIRUI_12875 oleate hydratase K10254 ohyA; oleate hydratase [EC:4.2.1.53]
D ACIRUI_03490 bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D ACIRUI_15125 AGE family epimerase/isomerase K16213 cbe; cellobiose epimerase [EC:5.1.3.11]
D ACIRUI_09400 acetyl-CoA carboxylase carboxyl transferase subunit K04104 accD3; acyl-CoA carboxylase subunit beta [EC:6.4.1.-]
D ACIRUI_02915 RnfABCDGE type electron transport complex subunit D K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2]
D ACIRUI_02910 rsxC; (GenBank) electron transport complex subunit RsxC K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2]
D ACIRUI_02935 rnfB; (GenBank) RnfABCDGE type electron transport complex subunit B K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D ACIRUI_06780 cation-translocating P-type ATPase K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D ACIRUI_15260 heavy metal translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
D ACIRUI_02215 cation-translocating P-type ATPase K12952 ctpE; cation-transporting P-type ATPase E [EC:7.2.2.-]
C 99981 Carbohydrate metabolism
D ACIRUI_07045 HPr family phosphocarrier protein K11184 chr; catabolite repression HPr-like protein
C 99982 Energy metabolism
D ACIRUI_02920 RnfABCDGE type electron transport complex subunit G K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G
D ACIRUI_02925 rsxE; (GenBank) electron transport complex subunit RsxE K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E
D ACIRUI_02930 electron transport complex protein RnfA K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A
D ACIRUI_13230 nifU; (GenBank) Fe-S cluster assembly scaffold protein NifU K04488 iscU; nitrogen fixation protein NifU and related proteins
D ACIRUI_13270 sufU; (GenBank) Fe-S cluster assembly sulfur transfer protein SufU K04488 iscU; nitrogen fixation protein NifU and related proteins
D ACIRUI_00495 nitrogenase component 1 K02587 nifE; nitrogenase molybdenum-cofactor synthesis protein NifE
D ACIRUI_05225 flavodoxin K03839 fldA; flavodoxin I
D ACIRUI_07805 electron transfer flavoprotein subunit beta/FixA family protein K03521 fixA; electron transfer flavoprotein beta subunit
C 99983 Lipid metabolism
D ACIRUI_01640 DegV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit
D ACIRUI_11900 DegV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit
C 99984 Nucleotide metabolism
D ACIRUI_04010 DNA/RNA non-specific endonuclease K15051 endA; DNA-entry nuclease
C 99985 Amino acid metabolism
D ACIRUI_14275 VOC family protein K08234 yaeR; glyoxylase I family protein
D ACIRUI_03285 YggS family pyridoxal phosphate-dependent enzyme K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
C 99987 Cofactor metabolism
C 99988 Secondary metabolism
C 99999 Others
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D ACIRUI_16535 cold-shock protein K03704 cspA; cold shock protein
D ACIRUI_15320 Tex family protein K06959 tex; protein Tex
C 99974 Translation
D ACIRUI_02035 MBL fold metallo-hydrolase RNA specificity domain-containing protein K07576 K07576; metallo-beta-lactamase family protein
C 99975 Protein processing
D ACIRUI_15710 tig; (GenBank) trigger factor K03545 tig; trigger factor
D ACIRUI_15795 FKBP-type peptidyl-prolyl cis-trans isomerase K03545 tig; trigger factor
D ACIRUI_00645 smpB; (GenBank) SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein
D ACIRUI_00510 HypC/HybG/HupF family hydrogenase formation chaperone K04653 hypC; hydrogenase expression/formation protein HypC
D ACIRUI_00515 hypD; (GenBank) hydrogenase formation protein HypD K04654 hypD; hydrogenase expression/formation protein HypD
D ACIRUI_00520 hypE; (GenBank) hydrogenase expression/formation protein HypE K04655 hypE; hydrogenase expression/formation protein HypE
D ACIRUI_00505 hypF; (GenBank) carbamoyltransferase HypF K04656 hypF; hydrogenase maturation protein HypF
D ACIRUI_02420 YifB family Mg chelatase-like AAA ATPase K07391 comM; magnesium chelatase family protein
D ACIRUI_07495 yqeB; (GenBank) selenium-dependent molybdenum cofactor biosynthesis protein YqeB K07402 xdhC; xanthine dehydrogenase accessory factor
D ACIRUI_06230 adaptor protein MecA K16511 mecA1_2; adapter protein MecA 1/2
D ACIRUI_10260 adaptor protein MecA K16511 mecA1_2; adapter protein MecA 1/2
C 99976 Replication and repair
D ACIRUI_01415 viroplasmin family protein K06993 K06993; ribonuclease H-related protein
D ACIRUI_03350 radC; (GenBank) DNA repair protein RadC K03630 radC; DNA repair protein RadC
D ACIRUI_04345 JAB domain-containing protein K03630 radC; DNA repair protein RadC
D ACIRUI_01535 YraN family protein K07460 yraN; putative endonuclease
D ACIRUI_02425 dprA; (GenBank) DNA-processing protein DprA K04096 smf; DNA processing protein
D ACIRUI_02270 mobT; (GenBank) MobT family relaxase K07467 nicK; putative DNA relaxase
D ACIRUI_06620 replication-associated recombination protein A K07478 ycaJ; putative ATPase
D ACIRUI_01025 transposase K07483 K07483; transposase
D ACIRUI_02165 transposase K07483 K07483; transposase
D ACIRUI_04690 tnpB; (GenBank) IS66 family insertion sequence element accessory protein TnpB K07484 K07484; transposase
D ACIRUI_09010 transposase K07484 K07484; transposase
D ACIRUI_09040 tnpB; (GenBank) IS66 family insertion sequence element accessory protein TnpB K07484 K07484; transposase
D ACIRUI_09045 tnpC; (GenBank) IS66 family transposase K07484 K07484; transposase
D ACIRUI_10080 tnpC; (GenBank) IS66 family transposase K07484 K07484; transposase
D ACIRUI_10085 tnpB; (GenBank) IS66 family insertion sequence element accessory protein TnpB K07484 K07484; transposase
D ACIRUI_12515 transposase K07484 K07484; transposase
D ACIRUI_14370 tnpB; (GenBank) IS66 family insertion sequence element accessory protein TnpB K07484 K07484; transposase
D ACIRUI_08280 transposase K07486 K07486; transposase
D ACIRUI_09925 IS110 family transposase K07486 K07486; transposase
D ACIRUI_00930 IS256 family transposase K07493 K07493; putative transposase
D ACIRUI_00010 tnpB; (GenBank) IS200/IS605 family element RNA-guided endonuclease TnpB K07496 K07496; putative transposase
D ACIRUI_01020 IS3 family transposase K07497 K07497; putative transposase
D ACIRUI_02170 IS3 family transposase K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D ACIRUI_15480 rhodanese-like domain-containing protein K03972 pspE; phage shock protein E
D ACIRUI_13740 YbaB/EbfC family nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D ACIRUI_16175 MFS transporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family
D ACIRUI_02720 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D ACIRUI_14900 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D ACIRUI_15235 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D ACIRUI_00550 alanine/glycine:cation symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D ACIRUI_09690 alanine/glycine:cation symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D ACIRUI_13145 alanine/glycine:cation symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D ACIRUI_09975 bile acid:sodium symporter family protein K03453 TC.BASS; bile acid:Na+ symporter, BASS family
C 99978 Cell growth
D ACIRUI_02380 spore coat protein CotJB K06333 cotJB; spore coat protein JB
D ACIRUI_11440 jag; (GenBank) RNA-binding cell elongation regulator Jag/EloR K06346 jag; spoIIIJ-associated protein
D ACIRUI_10450 nucleoside recognition protein K06373 spmA; spore maturation protein A
D ACIRUI_10445 spore maturation protein K06374 spmB; spore maturation protein B
D ACIRUI_06850 anti-sigma factor antagonist K06378 spoIIAA; stage II sporulation protein AA (anti-sigma F factor antagonist)
D ACIRUI_04990 spoIIP; (GenBank) stage II sporulation protein P K06385 spoIIP; stage II sporulation protein P
D ACIRUI_15775 spoIIR; (GenBank) stage II sporulation protein R K06387 spoIIR; stage II sporulation protein R
D ACIRUI_04485 ATPase, T2SS/T4P/T4SS family K06390 spoIIIAA; stage III sporulation protein AA
D ACIRUI_04475 spoIIIAC; (GenBank) stage III sporulation protein AC K06392 spoIIIAC; stage III sporulation protein AC
D ACIRUI_04470 SpoIIIAC/SpoIIIAD family protein K06393 spoIIIAD; stage III sporulation protein AD
D ACIRUI_04465 stage III sporulation protein AE K06394 spoIIIAE; stage III sporulation protein AE
D ACIRUI_04455 hypothetical protein K06396 spoIIIAG; stage III sporulation protein AG
D ACIRUI_04450 SpoIIIAH-like family protein K06397 spoIIIAH; stage III sporulation protein AH
D ACIRUI_04555 spoIVA; (GenBank) stage IV sporulation protein A K06398 spoIVA; stage IV sporulation protein A
D ACIRUI_01000 recombinase family protein K06400 spoIVCA; site-specific DNA recombinase
D ACIRUI_04025 recombinase family protein K06400 spoIVCA; site-specific DNA recombinase
D ACIRUI_16240 stage V sporulation protein AA K06403 spoVAA; stage V sporulation protein AA
D ACIRUI_16245 stage V sporulation protein AB K06404 spoVAB; stage V sporulation protein AB
D ACIRUI_16235 SpoVA/SpoVAEb family sporulation membrane protein K06405 spoVAC; stage V sporulation protein AC
D ACIRUI_16270 stage V sporulation protein AD K06406 spoVAD; stage V sporulation protein AD
D ACIRUI_16275 SpoVA/SpoVAEb family sporulation membrane protein K06407 spoVAE; stage V sporulation protein AE
D ACIRUI_08810 NAD(P)-dependent oxidoreductase K06410 spoVFA; dipicolinate synthase subunit A
D ACIRUI_08805 dipicolinate synthase subunit B K06411 spoVFB; dipicolinate synthase subunit B
D ACIRUI_14850 spoVG; (GenBank) septation regulator SpoVG K06412 spoVG; stage V sporulation protein G
D ACIRUI_03055 alpha/beta-type small acid-soluble spore protein K06418 sspA_B_C_D; small acid-soluble spore protein A/B/C/D
D ACIRUI_15705 small, acid-soluble spore protein, alpha/beta type K06418 sspA_B_C_D; small acid-soluble spore protein A/B/C/D
D ACIRUI_03415 sporulation protein YqfD K06438 yqfD; similar to stage IV sporulation protein
D ACIRUI_01745 GerMN domain-containing protein K06298 gerM; germination protein M
D ACIRUI_15760 spore germination protein K06310 yndD; spore germination protein
C 99993 Cell motility
C 99995 Signaling proteins
D ACIRUI_16395 typA; (GenBank) translational GTPase TypA K06207 typA; GTP-binding protein
D ACIRUI_05085 ACT domain-containing protein K07166 K07166; ACT domain-containing protein
D ACIRUI_03410 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
C 99992 Structural proteins
D ACIRUI_12150 GH25 family lysozyme K07273 acm; lysozyme
C 99994 Others
D ACIRUI_07640 phoU; (GenBank) phosphate signaling complex protein PhoU K02039 phoU; phosphate transport system protein
D ACIRUI_01890 bacteriohemerythrin K07216 hr; hemerythrin
D ACIRUI_10940 bacteriohemerythrin K07216 hr; hemerythrin
D ACIRUI_01105 SdpI family protein K26996 sdpI; immunity protein, SdpI family
D ACIRUI_11665 SdpI family protein K26996 sdpI; immunity protein, SdpI family
B
B 09194 Poorly characterized
C 99996 General function prediction only
D ACIRUI_08375 RND family transporter K06994 K06994; putative drug exporter of the RND superfamily
D ACIRUI_06835 HAD family hydrolase K07025 K07025; putative hydrolase of the HAD superfamily
D ACIRUI_06965 HAD family hydrolase K07025 K07025; putative hydrolase of the HAD superfamily
D ACIRUI_12165 HAD family hydrolase K07025 K07025; putative hydrolase of the HAD superfamily
D ACIRUI_13255 sufB; (GenBank) Fe-S cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D ACIRUI_13260 SufB/SufD family protein K09015 sufD; Fe-S cluster assembly protein SufD
D ACIRUI_03425 YihY/virulence factor BrkB family protein K07058 K07058; membrane protein
D ACIRUI_13150 histidine phosphatase family protein K15640 K15640; uncharacterized phosphatase
D ACIRUI_07960 YhgE/Pip family protein K01421 yhgE; putative membrane protein
D ACIRUI_07965 YhgE/Pip family protein K01421 yhgE; putative membrane protein
C 99997 Function unknown
D ACIRUI_05645 radical SAM protein K06871 K06871; uncharacterized protein
D ACIRUI_15815 scfB; (GenBank) thioether cross-link-forming SCIFF peptide maturase K06871 K06871; uncharacterized protein
D ACIRUI_08875 TPM domain-containing protein K06872 K06872; uncharacterized protein
D ACIRUI_03760 ATP-binding protein K06921 K06921; uncharacterized protein
D ACIRUI_07625 ATP-binding protein K06923 K06923; uncharacterized protein
D ACIRUI_08295 ATP/GTP-binding protein K06926 K06926; uncharacterized protein
D ACIRUI_01490 KH domain-containing protein K06960 K06960; uncharacterized protein
D ACIRUI_00305 zinc metallopeptidase K06973 K06973; uncharacterized protein
D ACIRUI_04610 TAXI family TRAP transporter solute-binding subunit K07080 K07080; uncharacterized protein
D ACIRUI_08525 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D ACIRUI_08820 metallophosphoesterase family protein K07095 K07095; uncharacterized protein
D ACIRUI_10620 yfcE; (GenBank) phosphodiesterase K07095 K07095; uncharacterized protein
D ACIRUI_16060 transcription repressor NadR K07105 K07105; uncharacterized protein
D ACIRUI_01685 SDR family NAD(P)-dependent oxidoreductase K07124 K07124; uncharacterized protein
D ACIRUI_00015 ATP-binding protein K07133 K07133; uncharacterized protein
D ACIRUI_08880 ATP-binding protein K07133 K07133; uncharacterized protein
D ACIRUI_10360 ATP-binding protein K07133 K07133; uncharacterized protein
D ACIRUI_10670 ATP-binding protein K07133 K07133; uncharacterized protein
D ACIRUI_11035 ATP-binding protein K07133 K07133; uncharacterized protein
D ACIRUI_11640 ATP-binding protein K07133 K07133; uncharacterized protein
D ACIRUI_12170 ATP-binding protein K07133 K07133; uncharacterized protein
D ACIRUI_12220 ATP-binding protein K07133 K07133; uncharacterized protein
D ACIRUI_12480 ATP-binding protein K07133 K07133; uncharacterized protein
D ACIRUI_12945 ATP-binding protein K07133 K07133; uncharacterized protein
D ACIRUI_03375 FAD-dependent protein K07137 K07137; uncharacterized protein
D ACIRUI_05300 NAD(P)/FAD-dependent oxidoreductase K07137 K07137; uncharacterized protein
D ACIRUI_01800 TIGR01212 family radical SAM protein K07139 K07139; uncharacterized protein
D ACIRUI_12035 YitT family protein K07149 K07149; uncharacterized protein
D ACIRUI_15940 DUF6198 family protein K07149 K07149; uncharacterized protein
D ACIRUI_11450 yidD; (GenBank) membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein
D ACIRUI_00555 GatB/YqeY domain-containing protein K09117 K09117; uncharacterized protein
D ACIRUI_12545 DUF438 domain-containing protein K09155 K09155; uncharacterized protein
D ACIRUI_05080 PFL family protein K09157 K09157; uncharacterized protein
D ACIRUI_06865 DUF342 domain-containing protein K09749 K09749; uncharacterized protein
D ACIRUI_01410 DUF2225 domain-containing protein K09766 K09766; uncharacterized protein
D ACIRUI_02185 YaiI/YqxD family protein K09768 K09768; uncharacterized protein
D ACIRUI_10750 YaaR family protein K09770 K09770; uncharacterized protein
D ACIRUI_03295 DUF378 domain-containing protein K09779 K09779; uncharacterized protein
D ACIRUI_01475 ylxM; (GenBank) YlxM family DNA-binding protein K09787 K09787; uncharacterized protein
D ACIRUI_07165 S1 RNA-binding domain-containing protein K00243 K00243; uncharacterized protein
D ACIRUI_13905 glycoside hydrolase family 127 protein K09955 K09955; uncharacterized protein
D ACIRUI_11095 DUF1287 domain-containing protein K09974 K09974; uncharacterized protein
D ACIRUI_03185 ribosomal-processing cysteine protease Prp K07584 ysxB; uncharacterized protein
D ACIRUI_02775 rnpM; (GenBank) RNase P modulator RnpM K07742 ylxR; uncharacterized protein
!
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: September 17, 2025