+D GENES KO #

  KEGG Orthology (KO) - Roseobacter fucihabitans

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A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:rfu00010] D ROLI_017360 glk; (GenBank) Glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D ROLI_021330 pgi; (GenBank) Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D ROLI_012850 glpX; (GenBank) Fructose-1,6-bisphosphatase class 2 K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37] D ROLI_023800 fda; (GenBank) Fructose-bisphosphate aldolase class 1 K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D ROLI_015920 fbaA; (GenBank) putative fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D ROLI_019940 tpiA; (GenBank) Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D ROLI_017170 gapA; (GenBank) Glyceraldehyde-3-phosphate dehydrogenase 1 K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D ROLI_024180 gap; (GenBank) Glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D ROLI_024190 gap1; (GenBank) Glyceraldehyde-3-phosphate dehydrogenase 1 K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D ROLI_010970 pgk; (GenBank) Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D ROLI_039960 gpmI; (GenBank) 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D ROLI_019260 eno; (GenBank) Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D ROLI_003080 ttuE; (GenBank) Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D ROLI_008590 ppdK; (GenBank) Pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D ROLI_026870 aceE_1; (GenBank) Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D ROLI_042560 aceE_2; (GenBank) Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D ROLI_010950 acoA; (GenBank) Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D ROLI_010940 dxs_2; (GenBank) 1-deoxy-D-xylulose-5-phosphate synthase K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D ROLI_010930 pdhC; (GenBank) Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D ROLI_026860 aceF; (GenBank) Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D ROLI_007740 lpd3; (GenBank) Dihydrolipoyl dehydrogenase 3 K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D ROLI_024290 lpd; (GenBank) Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D ROLI_026850 lpdA; (GenBank) Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D ROLI_015470 flhA_1; (GenBank) S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D ROLI_041970 flhA_3; (GenBank) S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D ROLI_003660 ald_2; (GenBank) 3-succinoylsemialdehyde-pyridine dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D ROLI_003940 betB_1; (GenBank) NAD/NADP-dependent betaine aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D ROLI_010250 puuC_1; (GenBank) NADP/NAD-dependent aldehyde dehydrogenase PuuC K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D ROLI_028390 acsA_1; (GenBank) Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D ROLI_019630 galM; (GenBank) Aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D ROLI_017270 pgm; (GenBank) Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D ROLI_004900 pckA; (GenBank) Phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] C 00020 Citrate cycle (TCA cycle) [PATH:rfu00020] D ROLI_018440 gltA; (GenBank) Citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D ROLI_027910 acnA; (GenBank) Aconitate hydratase A K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D ROLI_002330 acnB; (GenBank) Aconitate hydratase B K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D ROLI_021150 icd_1; (GenBank) Isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D ROLI_035150 icd_2; (GenBank) Isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D ROLI_007800 sucA; (GenBank) 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D ROLI_007790 sucB; (GenBank) Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D ROLI_007740 lpd3; (GenBank) Dihydrolipoyl dehydrogenase 3 K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D ROLI_024290 lpd; (GenBank) Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D ROLI_026850 lpdA; (GenBank) Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D ROLI_007820 sucD_2; (GenBank) Succinate--CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D ROLI_007880 sucC_2; (GenBank) Succinate--CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D ROLI_006630 sdhA; (GenBank) Succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D ROLI_006650 sdhB; (GenBank) Succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D ROLI_006610 sdhC; (GenBank) Succinate dehydrogenase cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D ROLI_006620 hypothetical protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D ROLI_016460 frdA; (GenBank) Fumarate reductase flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D ROLI_016430 frdB; (GenBank) Fumarate reductase iron-sulfur subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D ROLI_016440 hypothetical protein K00246 frdC; succinate dehydrogenase subunit C D ROLI_016450 hypothetical protein K00247 frdD; succinate dehydrogenase subunit D D ROLI_023770 fumC; (GenBank) Fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D ROLI_007900 mdh_1; (GenBank) Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D ROLI_009940 pycA; (GenBank) Pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1] D ROLI_004900 pckA; (GenBank) Phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D ROLI_026870 aceE_1; (GenBank) Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D ROLI_042560 aceE_2; (GenBank) Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D ROLI_010950 acoA; (GenBank) Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D ROLI_010940 dxs_2; (GenBank) 1-deoxy-D-xylulose-5-phosphate synthase K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D ROLI_010930 pdhC; (GenBank) Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D ROLI_026860 aceF; (GenBank) Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] C 00030 Pentose phosphate pathway [PATH:rfu00030] D ROLI_021330 pgi; (GenBank) Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D ROLI_021350 zwf; (GenBank) Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D ROLI_021340 pgl; (GenBank) 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31] D ROLI_031500 rpe; (GenBank) Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D ROLI_019700 tktA; (GenBank) Transketolase 1 K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D ROLI_026360 tal; (GenBank) Transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D ROLI_008300 rpiA; (GenBank) Ribose-5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D ROLI_027110 hxlB; (GenBank) 3-hexulose-6-phosphate isomerase K08094 hxlB; 6-phospho-3-hexuloisomerase [EC:5.3.1.27] D ROLI_003950 deoC; (GenBank) Deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4] D ROLI_016180 rbsK_1; (GenBank) Ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15] D ROLI_016350 rbsK_2; (GenBank) Ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15] D ROLI_032560 deoB; (GenBank) Phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7] D ROLI_017270 pgm; (GenBank) Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D ROLI_020940 phnN; (GenBank) Ribose 1,5-bisphosphate phosphokinase PhnN K05774 phnN; ribose 1,5-bisphosphokinase [EC:2.7.4.23] D ROLI_007140 prs; (GenBank) Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D ROLI_017180 edd; (GenBank) Phosphogluconate dehydratase K01690 edd; phosphogluconate dehydratase [EC:4.2.1.12] D ROLI_017190 eda; (GenBank) KHG/KDPG aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D ROLI_042410 gnl; (GenBank) Gluconolactonase K01053 gnl; gluconolactonase [EC:3.1.1.17] D ROLI_004030 kdgK; (GenBank) 2-dehydro-3-deoxygluconokinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45] D ROLI_009060 D-glycerate 2-kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D ROLI_023800 fda; (GenBank) Fructose-bisphosphate aldolase class 1 K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D ROLI_015920 fbaA; (GenBank) putative fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D ROLI_012850 glpX; (GenBank) Fructose-1,6-bisphosphatase class 2 K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37] C 00040 Pentose and glucuronate interconversions [PATH:rfu00040] D ROLI_013380 kduD; (GenBank) 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase K00065 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase [EC:1.1.1.127] D ROLI_013000 uxaC; (GenBank) Uronate isomerase K01812 uxaC; glucuronate isomerase [EC:5.3.1.12] D ROLI_013020 uxuA_1; (GenBank) Mannonate dehydratase K01686 uxuA; mannonate dehydratase [EC:4.2.1.8] D ROLI_041000 uxuA_2; (GenBank) Mannonate dehydratase K01686 uxuA; mannonate dehydratase [EC:4.2.1.8] D ROLI_013010 mtlK_3; (GenBank) Mannitol 2-dehydrogenase K00040 uxuB; fructuronate reductase [EC:1.1.1.57] D ROLI_045260 ugd; (GenBank) UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D ROLI_043360 gtaB; (GenBank) UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D ROLI_031500 rpe; (GenBank) Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D ROLI_016230 xylB_1; (GenBank) Xylulose kinase K00854 xylB; xylulokinase [EC:2.7.1.17] D ROLI_017340 xylB_2; (GenBank) Xylulose kinase K00854 xylB; xylulokinase [EC:2.7.1.17] D ROLI_027180 xylB_3; (GenBank) Xylulose kinase K00854 xylB; xylulokinase [EC:2.7.1.17] D ROLI_016170 apsI; (GenBank) D-apiose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5] D ROLI_017350 xylA; (GenBank) Xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5] D ROLI_027550 hypothetical protein K01820 rhaA; L-rhamnose isomerase / sugar isomerase [EC:5.3.1.14 5.3.1.-] D ROLI_004170 araC; (GenBank) L-arabonate dehydratase K22186 xylD; xylonate dehydratase [EC:4.2.1.82] D ROLI_040100 aldHT; (GenBank) Aldehyde dehydrogenase, thermostable K22187 xylA; alpha-ketoglutaric semialdehyde dehydrogenase [EC:1.2.1.-] D ROLI_027280 fucA; (GenBank) L-fuculose phosphate aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17] C 00051 Fructose and mannose metabolism [PATH:rfu00051] D ROLI_017200 scrK; (GenBank) Fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D ROLI_046210 algA; (GenBank) Alginate biosynthesis protein AlgA K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D ROLI_045900 glmM_2; (GenBank) Phosphoglucosamine mutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D ROLI_027280 fucA; (GenBank) L-fuculose phosphate aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17] D ROLI_003600 pld1_1; (GenBank) Pyridoxal 4-dehydrogenase K00064 E1.1.1.122; D-threo-aldose 1-dehydrogenase [EC:1.1.1.122] D ROLI_016200 pld1_2; (GenBank) Pyridoxal 4-dehydrogenase K00064 E1.1.1.122; D-threo-aldose 1-dehydrogenase [EC:1.1.1.122] D ROLI_004160 2-keto-3-deoxy-L-fuconate dehydrogenase K18335 E1.1.1.434; 2-dehydro-3-deoxy-L-fuconate 4-dehydrogenase [EC:1.1.1.434] D ROLI_013370 2-keto-3-deoxy-L-fuconate dehydrogenase K18335 E1.1.1.434; 2-dehydro-3-deoxy-L-fuconate 4-dehydrogenase [EC:1.1.1.434] D ROLI_010170 LRA5; (GenBank) 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD(+)) K21883 lra5; 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD+) [EC:1.1.1.401] D ROLI_027550 hypothetical protein K01820 rhaA; L-rhamnose isomerase / sugar isomerase [EC:5.3.1.14 5.3.1.-] D ROLI_012850 glpX; (GenBank) Fructose-1,6-bisphosphatase class 2 K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37] D ROLI_016170 apsI; (GenBank) D-apiose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5] D ROLI_017350 xylA; (GenBank) Xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5] D ROLI_041450 mtlK_4; (GenBank) Mannitol 2-dehydrogenase K00045 mtlK; mannitol 2-dehydrogenase [EC:1.1.1.67] D ROLI_023800 fda; (GenBank) Fructose-bisphosphate aldolase class 1 K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D ROLI_015920 fbaA; (GenBank) putative fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D ROLI_019940 tpiA; (GenBank) Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D ROLI_004950 hypothetical protein K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] C 00052 Galactose metabolism [PATH:rfu00052] D ROLI_019630 galM; (GenBank) Aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D ROLI_043350 galE; (GenBank) UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D ROLI_043360 gtaB; (GenBank) UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D ROLI_017270 pgm; (GenBank) Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D ROLI_017360 glk; (GenBank) Glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D ROLI_017370 Beta-galactosidase K12308 bgaB; beta-galactosidase [EC:3.2.1.23] D ROLI_017420 rafA; (GenBank) Alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] D ROLI_007580 polS_1; (GenBank) Sorbitol dehydrogenase K21620 sorbD; galactitol 2-dehydrogenase [EC:1.1.1.16] D ROLI_041460 polS_3; (GenBank) Sorbitol dehydrogenase K21620 sorbD; galactitol 2-dehydrogenase [EC:1.1.1.16] D ROLI_007520 Tagatose kinase K21621 fk; tagatose kinase [EC:2.7.1.101] D ROLI_007510 gatZ; (GenBank) D-tagatose-1,6-bisphosphate aldolase subunit GatZ K16371 gatZ-kbaZ; D-tagatose-1,6-bisphosphate aldolase subunit GatZ/KbaZ D ROLI_017410 Sulfoquinovose 1-dehydrogenase K22215 galD; galactose dehydrogenase [EC:1.1.1.48 1.1.1.120] D ROLI_032200 dgoD; (GenBank) D-galactonate dehydratase K01684 dgoD; galactonate dehydratase [EC:4.2.1.6] D ROLI_017400 dgoK1; (GenBank) putative 2-dehydro-3-deoxygalactonokinase DgoK1 K00883 dgoK; 2-dehydro-3-deoxygalactonokinase [EC:2.7.1.58] D ROLI_017390 dgoA; (GenBank) 2-dehydro-3-deoxy-6-phosphogalactonate aldolase K01631 dgoA; 2-dehydro-3-deoxyphosphogalactonate aldolase [EC:4.1.2.21] D ROLI_028450 malL; (GenBank) Oligo-1,6-glucosidase 1 K01187 malZ; alpha-glucosidase [EC:3.2.1.20] C 00053 Ascorbate and aldarate metabolism [PATH:rfu00053] D ROLI_045260 ugd; (GenBank) UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D ROLI_042410 gnl; (GenBank) Gluconolactonase K01053 gnl; gluconolactonase [EC:3.1.1.17] D ROLI_003600 pld1_1; (GenBank) Pyridoxal 4-dehydrogenase K00064 E1.1.1.122; D-threo-aldose 1-dehydrogenase [EC:1.1.1.122] D ROLI_016200 pld1_2; (GenBank) Pyridoxal 4-dehydrogenase K00064 E1.1.1.122; D-threo-aldose 1-dehydrogenase [EC:1.1.1.122] D ROLI_046170 galE1; (GenBank) UDP-glucose 4-epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D ROLI_003660 ald_2; (GenBank) 3-succinoylsemialdehyde-pyridine dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D ROLI_003940 betB_1; (GenBank) NAD/NADP-dependent betaine aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D ROLI_010250 puuC_1; (GenBank) NADP/NAD-dependent aldehyde dehydrogenase PuuC K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D ROLI_026540 udh; (GenBank) Uronate dehydrogenase K18981 udh; uronate dehydrogenase [EC:1.1.1.203] C 00500 Starch and sucrose metabolism [PATH:rfu00500] D ROLI_028450 malL; (GenBank) Oligo-1,6-glucosidase 1 K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D ROLI_043360 gtaB; (GenBank) UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D ROLI_028500 bglA; (GenBank) Beta-glucosidase A K05350 bglB; beta-glucosidase [EC:3.2.1.21] D ROLI_017230 glgC; (GenBank) Glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D ROLI_017240 glgA1; (GenBank) Glycogen synthase 1 K00703 glgA; starch synthase [EC:2.4.1.21] D ROLI_017220 glgB; (GenBank) 1,4-alpha-glucan branching enzyme GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D ROLI_017210 malP; (GenBank) Maltodextrin phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D ROLI_017260 malQ; (GenBank) 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25] D ROLI_017250 glgX; (GenBank) Glycogen operon protein GlgX K01214 ISA; isoamylase [EC:3.2.1.68] D ROLI_017270 pgm; (GenBank) Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D ROLI_017360 glk; (GenBank) Glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D ROLI_021330 pgi; (GenBank) Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D ROLI_017200 scrK; (GenBank) Fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] C 00620 Pyruvate metabolism [PATH:rfu00620] D ROLI_028390 acsA_1; (GenBank) Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D ROLI_026870 aceE_1; (GenBank) Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D ROLI_042560 aceE_2; (GenBank) Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D ROLI_010950 acoA; (GenBank) Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D ROLI_010940 dxs_2; (GenBank) 1-deoxy-D-xylulose-5-phosphate synthase K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D ROLI_010930 pdhC; (GenBank) Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D ROLI_026860 aceF; (GenBank) Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D ROLI_007740 lpd3; (GenBank) Dihydrolipoyl dehydrogenase 3 K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D ROLI_024290 lpd; (GenBank) Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D ROLI_026850 lpdA; (GenBank) Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D ROLI_015470 flhA_1; (GenBank) S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D ROLI_041970 flhA_3; (GenBank) S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D ROLI_039400 pta; (GenBank) Phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D ROLI_003080 ttuE; (GenBank) Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D ROLI_002980 accA; (GenBank) Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D ROLI_017720 accB; (GenBank) Biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D ROLI_017710 accC; (GenBank) Biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D ROLI_039890 accD; (GenBank) Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D ROLI_003660 ald_2; (GenBank) 3-succinoylsemialdehyde-pyridine dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D ROLI_003940 betB_1; (GenBank) NAD/NADP-dependent betaine aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D ROLI_010250 puuC_1; (GenBank) NADP/NAD-dependent aldehyde dehydrogenase PuuC K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D ROLI_009950 lldD_1; (GenBank) L-lactate dehydrogenase K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3] D ROLI_031800 lldD_2; (GenBank) L-lactate dehydrogenase K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3] D ROLI_026790 ldhA; (GenBank) D-lactate dehydrogenase K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28] D ROLI_026890 dld; (GenBank) Quinone-dependent D-lactate dehydrogenase K03777 dld; D-lactate dehydrogenase (quinone) [EC:1.1.5.12] D ROLI_032930 putative FAD-linked oxidoreductase K00102 LDHD; D-lactate dehydrogenase (cytochrome) [EC:1.1.2.4] D ROLI_005710 gloA_1; (GenBank) Lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D ROLI_006260 gloA_2; (GenBank) Lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D ROLI_039320 gloA_3; (GenBank) Lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D ROLI_007050 gloB; (GenBank) Hydroxyacylglutathione hydrolase GloB K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D ROLI_036050 ghrA; (GenBank) Glyoxylate/hydroxypyruvate reductase A K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81] D ROLI_032600 maeB; (GenBank) NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D ROLI_043790 tme; (GenBank) NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D ROLI_009940 pycA; (GenBank) Pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1] D ROLI_007900 mdh_1; (GenBank) Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D ROLI_023770 fumC; (GenBank) Fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D ROLI_016460 frdA; (GenBank) Fumarate reductase flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D ROLI_016430 frdB; (GenBank) Fumarate reductase iron-sulfur subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D ROLI_016440 hypothetical protein K00246 frdC; succinate dehydrogenase subunit C D ROLI_016450 hypothetical protein K00247 frdD; succinate dehydrogenase subunit D D ROLI_001120 ppc; (GenBank) Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D ROLI_004900 pckA; (GenBank) Phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D ROLI_008590 ppdK; (GenBank) Pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D ROLI_011740 glcB; (GenBank) Malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9] D ROLI_003450 thlA; (GenBank) Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ROLI_006990 phaA_1; (GenBank) Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ROLI_026880 phaA_2; (GenBank) Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ROLI_032500 fadA; (GenBank) Putative acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ROLI_045040 bktB; (GenBank) Beta-ketothiolase BktB K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ROLI_018770 cimA; (GenBank) (R)-citramalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D ROLI_035980 leuA; (GenBank) 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:rfu00630] D ROLI_011740 glcB; (GenBank) Malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9] D ROLI_007900 mdh_1; (GenBank) Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D ROLI_018440 gltA; (GenBank) Citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D ROLI_027910 acnA; (GenBank) Aconitate hydratase A K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D ROLI_002330 acnB; (GenBank) Aconitate hydratase B K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D ROLI_001060 mcl1_1; (GenBank) L-malyl-CoA/beta-methylmalyl-CoA lyase K08691 mcl; malyl-CoA/(S)-citramalyl-CoA lyase [EC:4.1.3.24 4.1.3.25] D ROLI_003020 mcl1_2; (GenBank) L-malyl-CoA/beta-methylmalyl-CoA lyase K08691 mcl; malyl-CoA/(S)-citramalyl-CoA lyase [EC:4.1.3.24 4.1.3.25] D ROLI_007930 mcl2; (GenBank) (3S)-malyl-CoA thioesterase K14451 mcl2; (3S)-malyl-CoA thioesterase [EC:3.1.2.30] D ROLI_001100 sucD_1; (GenBank) Succinate--CoA ligase [ADP-forming] subunit alpha K08692 mtkB; malate-CoA ligase subunit alpha [EC:6.2.1.9] D ROLI_015230 sucD_3; (GenBank) Succinate--CoA ligase [ADP-forming] subunit alpha K08692 mtkB; malate-CoA ligase subunit alpha [EC:6.2.1.9] D ROLI_001090 sucC_1; (GenBank) Succinate--CoA ligase [ADP-forming] subunit beta K14067 mtkA; malate-CoA ligase subunit beta [EC:6.2.1.9] D ROLI_015220 sucC_3; (GenBank) Succinate--CoA ligase [ADP-forming] subunit beta K14067 mtkA; malate-CoA ligase subunit beta [EC:6.2.1.9] D ROLI_028390 acsA_1; (GenBank) Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D ROLI_003450 thlA; (GenBank) Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ROLI_006990 phaA_1; (GenBank) Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ROLI_026880 phaA_2; (GenBank) Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ROLI_032500 fadA; (GenBank) Putative acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ROLI_045040 bktB; (GenBank) Beta-ketothiolase BktB K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ROLI_006980 fabG_1; (GenBank) 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36] D ROLI_007200 phaJ; (GenBank) (R)-specific enoyl-CoA hydratase K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55] D ROLI_006710 ccr; (GenBank) Crotonyl-CoA carboxylase/reductase K14446 ccr; crotonyl-CoA carboxylase/reductase [EC:1.3.1.85] D ROLI_036280 epi; (GenBank) Ethylmalonyl-CoA/methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D ROLI_006680 ecm; (GenBank) Ethylmalonyl-CoA mutase K14447 ecm; ethylmalonyl-CoA mutase [EC:5.4.99.63] D ROLI_004860 mcd; (GenBank) (2S)-methylsuccinyl-CoA dehydrogenase K14448 mcd; (2S)-methylsuccinyl-CoA dehydrogenase [EC:1.3.8.12] D ROLI_007960 mch; (GenBank) Mesaconyl-CoA hydratase K14449 mch; 2-methylfumaryl-CoA hydratase [EC:4.2.1.148] D ROLI_029070 accA1_2; (GenBank) Acetyl-/propionyl-coenzyme A carboxylase alpha chain K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3] D ROLI_029130 pccB; (GenBank) Propionyl-CoA carboxylase beta chain K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15] D ROLI_029040 mcm; (GenBank) Methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D ROLI_016910 dhaa; (GenBank) 3-hydroxy-D-aspartate aldolase K18425 dhaa; 3-hydroxy-D-aspartate aldolase [EC:4.1.3.41] D ROLI_016900 thadh_1; (GenBank) L-threo-3-hydroxyaspartate ammonia-lyase K28180 bhcB; beta-hydroxyaspartate dehydratase [EC:4.2.1.-] D ROLI_016920 ala; (GenBank) Alanine dehydrogenase K28178 bhcD; iminosuccinate reductase [EC:1.4.1.-] D ROLI_016890 sgaA_2; (GenBank) Serine--glyoxylate aminotransferase K28179 bhcA; glycine---oxaloacetate transaminase [EC:2.6.1.35] D ROLI_001400 putative FAD-linked oxidoreductase K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14] D ROLI_001410 hypothetical protein K11472 glcE; glycolate dehydrogenase FAD-binding subunit [EC:1.1.99.14] D ROLI_001420 lutA_1; (GenBank) Lactate utilization protein A K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14] D ROLI_032950 Putative 2-hydroxyacid dehydrogenase K00015 gyaR; glyoxylate reductase [EC:1.1.1.26] D ROLI_036050 ghrA; (GenBank) Glyoxylate/hydroxypyruvate reductase A K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81] D ROLI_009890 cbbZC; (GenBank) Phosphoglycolate phosphatase, chromosomal K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D ROLI_011970 gph_1; (GenBank) Phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D ROLI_014960 gph_2; (GenBank) Phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D ROLI_033990 gph_3; (GenBank) Phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D ROLI_015200 sgaA_1; (GenBank) Serine--glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D ROLI_025320 sgaA_3; (GenBank) Serine--glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D ROLI_028300 sgaA_4; (GenBank) Serine--glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D ROLI_008050 puuA_1; (GenBank) Gamma-glutamylputrescine synthetase PuuA K01915 glnA; glutamine synthetase [EC:6.3.1.2] D ROLI_008070 puuA_2; (GenBank) Gamma-glutamylputrescine synthetase PuuA K01915 glnA; glutamine synthetase [EC:6.3.1.2] D ROLI_026690 glnA_1; (GenBank) Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D ROLI_027740 glnA_2; (GenBank) Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D ROLI_031410 ipuC; (GenBank) Glutamate--isopropylamine ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D ROLI_041750 glnT; (GenBank) Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D ROLI_001130 glyA2_1; (GenBank) Serine hydroxymethyltransferase 2 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D ROLI_032670 glyA2_2; (GenBank) Serine hydroxymethyltransferase 2 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D ROLI_035820 gcvP; (GenBank) Glycine dehydrogenase (decarboxylating) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D ROLI_035840 gcvT_1; (GenBank) Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D ROLI_041690 gcvT_2; (GenBank) Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D ROLI_041800 gcvT_3; (GenBank) Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D ROLI_007740 lpd3; (GenBank) Dihydrolipoyl dehydrogenase 3 K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D ROLI_024290 lpd; (GenBank) Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D ROLI_026850 lpdA; (GenBank) Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D ROLI_035830 gcvH; (GenBank) Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D ROLI_046030 hypothetical protein K01816 hyi; hydroxypyruvate isomerase [EC:5.3.1.22] D ROLI_004150 glxR; (GenBank) 2-hydroxy-3-oxopropionate reductase K00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60] D ROLI_009060 D-glycerate 2-kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D ROLI_016480 ttdA; (GenBank) L(+)-tartrate dehydratase subunit alpha K03779 ttdA; L(+)-tartrate dehydratase alpha subunit [EC:4.2.1.32] D ROLI_016490 ttdB; (GenBank) L(+)-tartrate dehydratase subunit beta K03780 ttdB; L(+)-tartrate dehydratase beta subunit [EC:4.2.1.32] D ROLI_017190 eda; (GenBank) KHG/KDPG aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D ROLI_004310 Putative formate dehydrogenase K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D ROLI_016730 napA; (GenBank) Periplasmic nitrate reductase K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D ROLI_008420 hypothetical protein K22515 fdwB; formate dehydrogenase beta subunit [EC:1.17.1.9] D ROLI_016740 fdhB1; (GenBank) Formate dehydrogenase iron-sulfur subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit D ROLI_016750 hypothetical protein K00127 fdoI; formate dehydrogenase subunit gamma D ROLI_031310 fmdA; (GenBank) Formamidase K01455 E3.5.1.49; formamidase [EC:3.5.1.49] D ROLI_026550 hypothetical protein K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68] C 00640 Propanoate metabolism [PATH:rfu00640] D ROLI_028390 acsA_1; (GenBank) Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D ROLI_032630 acsA_2; (GenBank) Acetyl-coenzyme A synthetase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17] D ROLI_039400 pta; (GenBank) Phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D ROLI_032340 dxs_3; (GenBank) 1-deoxy-D-xylulose-5-phosphate synthase K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4] D ROLI_007740 lpd3; (GenBank) Dihydrolipoyl dehydrogenase 3 K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D ROLI_024290 lpd; (GenBank) Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D ROLI_026850 lpdA; (GenBank) Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D ROLI_023630 acuI; (GenBank) Acrylyl-CoA reductase AcuI K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-] D ROLI_032520 fadJ_2; (GenBank) Fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D ROLI_002980 accA; (GenBank) Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D ROLI_017720 accB; (GenBank) Biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D ROLI_017710 accC; (GenBank) Biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D ROLI_039890 accD; (GenBank) Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D ROLI_040550 davT; (GenBank) 5-aminovalerate aminotransferase DavT K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D ROLI_029070 accA1_2; (GenBank) Acetyl-/propionyl-coenzyme A carboxylase alpha chain K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3] D ROLI_029130 pccB; (GenBank) Propionyl-CoA carboxylase beta chain K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15] D ROLI_036280 epi; (GenBank) Ethylmalonyl-CoA/methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D ROLI_029040 mcm; (GenBank) Methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D ROLI_007880 sucC_2; (GenBank) Succinate--CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D ROLI_007820 sucD_2; (GenBank) Succinate--CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D ROLI_024230 bauC; (GenBank) Putative 3-oxopropanoate dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D ROLI_027910 acnA; (GenBank) Aconitate hydratase A K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D ROLI_002330 acnB; (GenBank) Aconitate hydratase B K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] C 00650 Butanoate metabolism [PATH:rfu00650] D ROLI_003450 thlA; (GenBank) Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ROLI_006990 phaA_1; (GenBank) Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ROLI_026880 phaA_2; (GenBank) Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ROLI_032500 fadA; (GenBank) Putative acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ROLI_045040 bktB; (GenBank) Beta-ketothiolase BktB K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ROLI_004980 mmgB; (GenBank) putative 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D ROLI_031590 fadJ_1; (GenBank) Fatty acid oxidation complex subunit alpha K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D ROLI_032520 fadJ_2; (GenBank) Fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D ROLI_045080 echA8_2; (GenBank) putative enoyl-CoA hydratase echA8 K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17] D ROLI_007200 phaJ; (GenBank) (R)-specific enoyl-CoA hydratase K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55] D ROLI_006510 phaC; (GenBank) Poly(3-hydroxyalkanoate) polymerase subunit PhaC K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304] D ROLI_006500 hypothetical protein K05973 phaZ; poly(3-hydroxybutyrate) depolymerase [EC:3.1.1.75] D ROLI_006980 fabG_1; (GenBank) 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36] D ROLI_016140 maiA; (GenBank) Maleate isomerase K01799 nicE; maleate isomerase [EC:5.2.1.1] D ROLI_006630 sdhA; (GenBank) Succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D ROLI_006650 sdhB; (GenBank) Succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D ROLI_006610 sdhC; (GenBank) Succinate dehydrogenase cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D ROLI_006620 hypothetical protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D ROLI_016460 frdA; (GenBank) Fumarate reductase flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D ROLI_016430 frdB; (GenBank) Fumarate reductase iron-sulfur subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D ROLI_016440 hypothetical protein K00246 frdC; succinate dehydrogenase subunit C D ROLI_016450 hypothetical protein K00247 frdD; succinate dehydrogenase subunit D D ROLI_040550 davT; (GenBank) 5-aminovalerate aminotransferase DavT K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D ROLI_001680 davD; (GenBank) Glutarate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D ROLI_047430 gabD1; (GenBank) Succinate-semialdehyde dehydrogenase [NADP(+)] 1 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D ROLI_012030 liuE; (GenBank) 3-hydroxy-3-isohexenylglutaryl-CoA/hydroxy-methylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D ROLI_015750 scoA; (GenBank) putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5] D ROLI_015760 scoB; (GenBank) putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] D ROLI_021500 bdhA_1; (GenBank) D-beta-hydroxybutyrate dehydrogenase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30] D ROLI_022640 ilvI; (GenBank) Acetolactate synthase isozyme 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D ROLI_029640 alsS_1; (GenBank) Acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D ROLI_030600 alsS_2; (GenBank) Acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D ROLI_022660 ilvH; (GenBank) Acetolactate synthase isozyme 3 small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D ROLI_013430 budC; (GenBank) Diacetyl reductase [(S)-acetoin forming] K03366 butA; meso-butanediol dehydrogenase / (S,S)-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.- 1.1.1.76 1.1.1.304] C 00660 C5-Branched dibasic acid metabolism [PATH:rfu00660] D ROLI_022640 ilvI; (GenBank) Acetolactate synthase isozyme 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D ROLI_029640 alsS_1; (GenBank) Acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D ROLI_030600 alsS_2; (GenBank) Acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D ROLI_022660 ilvH; (GenBank) Acetolactate synthase isozyme 3 small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D ROLI_007880 sucC_2; (GenBank) Succinate--CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D ROLI_007820 sucD_2; (GenBank) Succinate--CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D ROLI_001060 mcl1_1; (GenBank) L-malyl-CoA/beta-methylmalyl-CoA lyase K08691 mcl; malyl-CoA/(S)-citramalyl-CoA lyase [EC:4.1.3.24 4.1.3.25] D ROLI_003020 mcl1_2; (GenBank) L-malyl-CoA/beta-methylmalyl-CoA lyase K08691 mcl; malyl-CoA/(S)-citramalyl-CoA lyase [EC:4.1.3.24 4.1.3.25] D ROLI_007960 mch; (GenBank) Mesaconyl-CoA hydratase K14449 mch; 2-methylfumaryl-CoA hydratase [EC:4.2.1.148] D ROLI_001340 leuC; (GenBank) 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D ROLI_001330 leuD1; (GenBank) 3-isopropylmalate dehydratase small subunit 1 K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D ROLI_001300 leuB_1; (GenBank) 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D ROLI_015590 leuB_2; (GenBank) 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism [PATH:rfu00562] D ROLI_014710 suhB_1; (GenBank) Inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D ROLI_037590 suhB_3; (GenBank) Inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D ROLI_010790 iolG_1; (GenBank) Inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369] D ROLI_015910 idhA; (GenBank) Inositol 2-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369] D ROLI_015970 iolE_1; (GenBank) Inosose dehydratase K03335 iolE; inosose dehydratase [EC:4.2.1.44] D ROLI_015950 iolD; (GenBank) 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase K03336 iolD; 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) [EC:3.7.1.22] D ROLI_015930 iolB; (GenBank) 5-deoxy-glucuronate isomerase K03337 iolB; 5-deoxy-glucuronate isomerase [EC:5.3.1.30] D ROLI_015940 iolC; (GenBank) 5-dehydro-2-deoxygluconokinase K03338 iolC; 5-dehydro-2-deoxygluconokinase [EC:2.7.1.92] D ROLI_024230 bauC; (GenBank) Putative 3-oxopropanoate dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D ROLI_019940 tpiA; (GenBank) Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:rfu00190] D ROLI_012220 ndhC; (GenBank) NAD(P)H-quinone oxidoreductase subunit 3 K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2] D ROLI_012230 nuoB; (GenBank) NADH-quinone oxidoreductase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2] D ROLI_012250 nqo5; (GenBank) NADH-quinone oxidoreductase chain 5 K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2] D ROLI_012280 nuoD; (GenBank) NADH-quinone oxidoreductase subunit D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2] D ROLI_012300 hypothetical protein K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2] D ROLI_012330 nqo1; (GenBank) NADH-quinone oxidoreductase chain 1 K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2] D ROLI_012380 nqo3; (GenBank) NADH-quinone oxidoreductase chain 3 K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2] D ROLI_012410 nuoH; (GenBank) NADH-quinone oxidoreductase subunit H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2] D ROLI_012430 nuoI; (GenBank) NADH-quinone oxidoreductase subunit I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2] D ROLI_012450 nuoJ; (GenBank) NADH-quinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2] D ROLI_012460 nuoK; (GenBank) NADH-quinone oxidoreductase subunit K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2] D ROLI_012470 nuoL; (GenBank) NADH-quinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2] D ROLI_012480 nuoM; (GenBank) NADH-quinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2] D ROLI_012490 nuoN; (GenBank) NADH-quinone oxidoreductase subunit N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2] D ROLI_006630 sdhA; (GenBank) Succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D ROLI_006650 sdhB; (GenBank) Succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D ROLI_006610 sdhC; (GenBank) Succinate dehydrogenase cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D ROLI_006620 hypothetical protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D ROLI_016460 frdA; (GenBank) Fumarate reductase flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D ROLI_016430 frdB; (GenBank) Fumarate reductase iron-sulfur subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D ROLI_016440 hypothetical protein K00246 frdC; succinate dehydrogenase subunit C D ROLI_016450 hypothetical protein K00247 frdD; succinate dehydrogenase subunit D D ROLI_005570 petA; (GenBank) Ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D ROLI_005580 petB; (GenBank) Cytochrome b K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D ROLI_005590 petC; (GenBank) Cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D ROLI_025890 ctaB; (GenBank) Protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D ROLI_025860 ctaE_2; (GenBank) Cytochrome c oxidase subunit 3 K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9] D ROLI_008790 ctaDII; (GenBank) Cytochrome c oxidase subunit 1-beta K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9] D ROLI_025900 ctaC; (GenBank) Cytochrome c oxidase subunit 2 K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9] D ROLI_025870 ctaG; (GenBank) Cytochrome c oxidase assembly protein CtaG K02258 COX11; cytochrome c oxidase assembly protein subunit 11 D ROLI_021410 ctaA; (GenBank) Heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9] D ROLI_037090 fixN; (GenBank) Cytochrome c oxidase subunit 1, bacteroid K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9] D ROLI_037080 hypothetical protein K00405 ccoO; cytochrome c oxidase cbb3-type subunit II D ROLI_037070 hypothetical protein K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV D ROLI_037060 ccoP; (GenBank) Cbb3-type cytochrome c oxidase subunit CcoP K00406 ccoP; cytochrome c oxidase cbb3-type subunit III D ROLI_002100 Cytochrome c2 K08738 CYC; cytochrome c D ROLI_002610 Cytochrome c-551 K08738 CYC; cytochrome c D ROLI_037170 cycM; (GenBank) Cytochrome c-552 K08738 CYC; cytochrome c D ROLI_038450 hypothetical protein K08738 CYC; cytochrome c D ROLI_041320 hypothetical protein K08738 CYC; cytochrome c D ROLI_041950 hypothetical protein K08738 CYC; cytochrome c D ROLI_007080 atpA; (GenBank) ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D ROLI_007100 atpD; (GenBank) ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D ROLI_007090 atpG_1; (GenBank) ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D ROLI_007070 atpH; (GenBank) ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D ROLI_007110 atpC; (GenBank) ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D ROLI_036500 atpB; (GenBank) ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a D ROLI_036470 atpF; (GenBank) ATP synthase subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b D ROLI_036480 atpG_2; (GenBank) ATP synthase subunit b' K02109 ATPF0B; F-type H+-transporting ATPase subunit b D ROLI_036490 atpE; (GenBank) ATP synthase subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c D ROLI_007220 ppaC; (GenBank) putative manganese-dependent inorganic pyrophosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1] D ROLI_028980 ppk; (GenBank) Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D ROLI_023080 Polyphosphate:NDP phosphotransferase 3 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D ROLI_034640 ppk2; (GenBank) Polyphosphate:NDP phosphotransferase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation by Calvin cycle [PATH:rfu00710] D ROLI_010970 pgk; (GenBank) Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D ROLI_017170 gapA; (GenBank) Glyceraldehyde-3-phosphate dehydrogenase 1 K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D ROLI_024180 gap; (GenBank) Glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D ROLI_024190 gap1; (GenBank) Glyceraldehyde-3-phosphate dehydrogenase 1 K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D ROLI_023800 fda; (GenBank) Fructose-bisphosphate aldolase class 1 K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D ROLI_015920 fbaA; (GenBank) putative fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D ROLI_012850 glpX; (GenBank) Fructose-1,6-bisphosphatase class 2 K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37] D ROLI_019700 tktA; (GenBank) Transketolase 1 K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D ROLI_008300 rpiA; (GenBank) Ribose-5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D ROLI_019940 tpiA; (GenBank) Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D ROLI_031500 rpe; (GenBank) Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D ROLI_026360 tal; (GenBank) Transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D ROLI_001120 ppc; (GenBank) Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D ROLI_004900 pckA; (GenBank) Phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D ROLI_008590 ppdK; (GenBank) Pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D ROLI_032600 maeB; (GenBank) NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D ROLI_043790 tme; (GenBank) NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D ROLI_007900 mdh_1; (GenBank) Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] C 00720 Other carbon fixation pathways [PATH:rfu00720] D ROLI_008590 ppdK; (GenBank) Pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D ROLI_001120 ppc; (GenBank) Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D ROLI_009940 pycA; (GenBank) Pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1] D ROLI_007900 mdh_1; (GenBank) Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D ROLI_023770 fumC; (GenBank) Fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D ROLI_006630 sdhA; (GenBank) Succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D ROLI_006650 sdhB; (GenBank) Succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D ROLI_006610 sdhC; (GenBank) Succinate dehydrogenase cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D ROLI_006620 hypothetical protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D ROLI_016460 frdA; (GenBank) Fumarate reductase flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D ROLI_016430 frdB; (GenBank) Fumarate reductase iron-sulfur subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D ROLI_016440 hypothetical protein K00246 frdC; succinate dehydrogenase subunit C D ROLI_016450 hypothetical protein K00247 frdD; succinate dehydrogenase subunit D D ROLI_007820 sucD_2; (GenBank) Succinate--CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D ROLI_007880 sucC_2; (GenBank) Succinate--CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D ROLI_003450 thlA; (GenBank) Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ROLI_006990 phaA_1; (GenBank) Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ROLI_026880 phaA_2; (GenBank) Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ROLI_032500 fadA; (GenBank) Putative acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ROLI_045040 bktB; (GenBank) Beta-ketothiolase BktB K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ROLI_021150 icd_1; (GenBank) Isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D ROLI_035150 icd_2; (GenBank) Isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D ROLI_027910 acnA; (GenBank) Aconitate hydratase A K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D ROLI_002330 acnB; (GenBank) Aconitate hydratase B K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D ROLI_002980 accA; (GenBank) Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D ROLI_017720 accB; (GenBank) Biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D ROLI_017710 accC; (GenBank) Biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D ROLI_039890 accD; (GenBank) Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D ROLI_001060 mcl1_1; (GenBank) L-malyl-CoA/beta-methylmalyl-CoA lyase K08691 mcl; malyl-CoA/(S)-citramalyl-CoA lyase [EC:4.1.3.24 4.1.3.25] D ROLI_003020 mcl1_2; (GenBank) L-malyl-CoA/beta-methylmalyl-CoA lyase K08691 mcl; malyl-CoA/(S)-citramalyl-CoA lyase [EC:4.1.3.24 4.1.3.25] D ROLI_007960 mch; (GenBank) Mesaconyl-CoA hydratase K14449 mch; 2-methylfumaryl-CoA hydratase [EC:4.2.1.148] D ROLI_015250 mct; (GenBank) 2-methylfumaryl-CoA isomerase K14470 mct; 2-methylfumaryl-CoA isomerase [EC:5.4.1.3] D ROLI_015240 hypothetical protein K09709 meh; 3-methylfumaryl-CoA hydratase [EC:4.2.1.153] D ROLI_036280 epi; (GenBank) Ethylmalonyl-CoA/methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D ROLI_029040 mcm; (GenBank) Methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D ROLI_026150 fhs; (GenBank) Formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3] D ROLI_026130 folD; (GenBank) Bifunctional protein FolD protein K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D ROLI_022050 hypothetical protein K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D ROLI_025230 metF; (GenBank) 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D ROLI_039400 pta; (GenBank) Phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D ROLI_028390 acsA_1; (GenBank) Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] C 00680 Methane metabolism [PATH:rfu00680] D ROLI_041940 moxF; (GenBank) Methanol dehydrogenase [cytochrome c] subunit 1 K23995 xoxF; lanthanide-dependent methanol dehydrogenase [EC:1.1.2.10] D ROLI_015470 flhA_1; (GenBank) S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D ROLI_041970 flhA_3; (GenBank) S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D ROLI_039810 fghA_1; (GenBank) S-formylglutathione hydrolase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12] D ROLI_041960 fghA_2; (GenBank) S-formylglutathione hydrolase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12] D ROLI_004310 Putative formate dehydrogenase K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D ROLI_016730 napA; (GenBank) Periplasmic nitrate reductase K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D ROLI_008420 hypothetical protein K22515 fdwB; formate dehydrogenase beta subunit [EC:1.17.1.9] D ROLI_016740 fdhB1; (GenBank) Formate dehydrogenase iron-sulfur subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit D ROLI_016750 hypothetical protein K00127 fdoI; formate dehydrogenase subunit gamma D ROLI_001130 glyA2_1; (GenBank) Serine hydroxymethyltransferase 2 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D ROLI_032670 glyA2_2; (GenBank) Serine hydroxymethyltransferase 2 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D ROLI_015200 sgaA_1; (GenBank) Serine--glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D ROLI_025320 sgaA_3; (GenBank) Serine--glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D ROLI_028300 sgaA_4; (GenBank) Serine--glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D ROLI_009060 D-glycerate 2-kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D ROLI_019260 eno; (GenBank) Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D ROLI_001120 ppc; (GenBank) Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D ROLI_007900 mdh_1; (GenBank) Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D ROLI_001100 sucD_1; (GenBank) Succinate--CoA ligase [ADP-forming] subunit alpha K08692 mtkB; malate-CoA ligase subunit alpha [EC:6.2.1.9] D ROLI_015230 sucD_3; (GenBank) Succinate--CoA ligase [ADP-forming] subunit alpha K08692 mtkB; malate-CoA ligase subunit alpha [EC:6.2.1.9] D ROLI_001090 sucC_1; (GenBank) Succinate--CoA ligase [ADP-forming] subunit beta K14067 mtkA; malate-CoA ligase subunit beta [EC:6.2.1.9] D ROLI_015220 sucC_3; (GenBank) Succinate--CoA ligase [ADP-forming] subunit beta K14067 mtkA; malate-CoA ligase subunit beta [EC:6.2.1.9] D ROLI_001060 mcl1_1; (GenBank) L-malyl-CoA/beta-methylmalyl-CoA lyase K08691 mcl; malyl-CoA/(S)-citramalyl-CoA lyase [EC:4.1.3.24 4.1.3.25] D ROLI_003020 mcl1_2; (GenBank) L-malyl-CoA/beta-methylmalyl-CoA lyase K08691 mcl; malyl-CoA/(S)-citramalyl-CoA lyase [EC:4.1.3.24 4.1.3.25] D ROLI_023800 fda; (GenBank) Fructose-bisphosphate aldolase class 1 K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D ROLI_015920 fbaA; (GenBank) putative fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D ROLI_012850 glpX; (GenBank) Fructose-1,6-bisphosphatase class 2 K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37] D ROLI_027110 hxlB; (GenBank) 3-hexulose-6-phosphate isomerase K08094 hxlB; 6-phospho-3-hexuloisomerase [EC:5.3.1.27] D ROLI_013800 tmd_1; (GenBank) Trimethylamine dehydrogenase K00317 dmd-tmd; dimethylamine/trimethylamine dehydrogenase [EC:1.5.8.1 1.5.8.2] D ROLI_013810 tmd_2; (GenBank) Trimethylamine dehydrogenase K00317 dmd-tmd; dimethylamine/trimethylamine dehydrogenase [EC:1.5.8.1 1.5.8.2] D ROLI_041770 hypothetical protein K18277 tmm; trimethylamine monooxygenase [EC:1.14.13.148] D ROLI_042310 dmsA_2; (GenBank) Dimethyl sulfoxide/trimethylamine N-oxide reductase K07812 torZ; trimethylamine-N-oxide reductase (cytochrome c) [EC:1.7.2.3] D ROLI_041720 purF_2; (GenBank) Amidophosphoribosyltransferase K22081 mgsA; methylamine---glutamate N-methyltransferase subunit A [EC:2.1.1.21] D ROLI_041730 hypothetical protein K22082 mgsB; methylamine---glutamate N-methyltransferase subunit B [EC:2.1.1.21] D ROLI_016550 hypothetical protein K22083 mgsC; methylamine---glutamate N-methyltransferase subunit C [EC:2.1.1.21] D ROLI_041740 fni; (GenBank) Isopentenyl-diphosphate delta-isomerase K22083 mgsC; methylamine---glutamate N-methyltransferase subunit C [EC:2.1.1.21] D ROLI_041600 soxB_2; (GenBank) Sarcosine oxidase subunit beta K22084 mgdA; methylglutamate dehydrogenase subunit A [EC:1.5.99.5] D ROLI_041610 soxD_2; (GenBank) Sarcosine oxidase subunit delta K22085 mgdB; methylglutamate dehydrogenase subunit B [EC:1.5.99.5] D ROLI_041620 soxA_3; (GenBank) Sarcosine oxidase subunit alpha K22086 mgdC; methylglutamate dehydrogenase subunit C [EC:1.5.99.5] D ROLI_041630 hypothetical protein K22087 mgdD; methylglutamate dehydrogenase subunit D [EC:1.5.99.5] D ROLI_032650 hypothetical protein K00441 frhB; coenzyme F420 hydrogenase subunit beta [EC:1.12.98.1] D ROLI_039400 pta; (GenBank) Phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D ROLI_028390 acsA_1; (GenBank) Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D ROLI_039960 gpmI; (GenBank) 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D ROLI_044990 serA; (GenBank) D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D ROLI_044980 serC; (GenBank) Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D ROLI_000330 hypothetical protein K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D ROLI_014970 mtgB_1; (GenBank) Glycine betaine methyltransferase K14083 mttB; trimethylamine---corrinoid protein Co-methyltransferase [EC:2.1.1.250] D ROLI_018720 mtgB_2; (GenBank) Glycine betaine methyltransferase K14083 mttB; trimethylamine---corrinoid protein Co-methyltransferase [EC:2.1.1.250] D ROLI_021870 mtgB_3; (GenBank) Glycine betaine methyltransferase K14083 mttB; trimethylamine---corrinoid protein Co-methyltransferase [EC:2.1.1.250] D ROLI_015400 hypothetical protein K06034 comD; sulfopyruvate decarboxylase subunit alpha [EC:4.1.1.79] D ROLI_015390 hypothetical protein K13039 comE; sulfopyruvate decarboxylase subunit beta [EC:4.1.1.79] C 00910 Nitrogen metabolism [PATH:rfu00910] D ROLI_031310 fmdA; (GenBank) Formamidase K01455 E3.5.1.49; formamidase [EC:3.5.1.49] D ROLI_002080 nirS_2; (GenBank) Nitrite reductase K15864 nirS; nitrite reductase (NO-forming) / hydroxylamine reductase [EC:1.7.2.1 1.7.99.1] D ROLI_002120 norB; (GenBank) Nitric oxide reductase subunit B K04561 norB; nitric oxide reductase subunit B [EC:1.7.2.5] D ROLI_002110 norC; (GenBank) Nitric oxide reductase subunit C K02305 norC; nitric oxide reductase subunit C D ROLI_002250 nosZ; (GenBank) Nitrous-oxide reductase K00376 nosZ; nitrous-oxide reductase [EC:1.7.2.4] D ROLI_024980 gdhA_1; (GenBank) Glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D ROLI_029630 gdhA_2; (GenBank) NAD(P)-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D ROLI_008050 puuA_1; (GenBank) Gamma-glutamylputrescine synthetase PuuA K01915 glnA; glutamine synthetase [EC:6.3.1.2] D ROLI_008070 puuA_2; (GenBank) Gamma-glutamylputrescine synthetase PuuA K01915 glnA; glutamine synthetase [EC:6.3.1.2] D ROLI_026690 glnA_1; (GenBank) Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D ROLI_027740 glnA_2; (GenBank) Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D ROLI_031410 ipuC; (GenBank) Glutamate--isopropylamine ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D ROLI_041750 glnT; (GenBank) Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D ROLI_005170 gltB; (GenBank) Glutamate synthase [NADPH] large chain K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D ROLI_005140 gltD; (GenBank) Glutamate synthase [NADPH] small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D ROLI_039730 cynT; (GenBank) Carbonic anhydrase 1 K01673 cynT; carbonic anhydrase [EC:4.2.1.1] C 00920 Sulfur metabolism [PATH:rfu00920] D ROLI_002830 hypothetical protein K15551 tauA; taurine transport system substrate-binding protein D ROLI_002850 hypothetical protein K15552 tauC; taurine transport system permease protein D ROLI_002840 tauB; (GenBank) Taurine import ATP-binding protein TauB K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7] D ROLI_046150 sat_cysC; (GenBank) putative bifunctional SAT/APS kinase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] D ROLI_043380 cysQ; (GenBank) 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D ROLI_019850 cysH; (GenBank) Phosphoadenosine phosphosulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10] D ROLI_039410 soeA; (GenBank) Sulfite dehydrogenase subunit A K21307 soeA; sulfite dehydrogenase (quinone) subunit SoeA [EC:1.8.5.6] D ROLI_039420 soeB; (GenBank) Sulfite dehydrogenase subunit B K21308 soeB; sulfite dehydrogenase (quinone) subunit SoeB D ROLI_039430 soeC; (GenBank) Sulfite dehydrogenase subunit C K21309 soeC; sulfite dehydrogenase (quinone) subunit SoeC D ROLI_041360 soxA_2; (GenBank) L-cysteine S-thiosulfotransferase subunit SoxA K17222 soxA; L-cysteine S-thiosulfotransferase [EC:2.8.5.2] D ROLI_041390 hypothetical protein K17223 soxX; L-cysteine S-thiosulfotransferase [EC:2.8.5.2] D ROLI_041380 hypothetical protein K17226 soxY; sulfur-oxidizing protein SoxY D ROLI_041900 hypothetical protein K17226 soxY; sulfur-oxidizing protein SoxY D ROLI_042000 hypothetical protein K17226 soxY; sulfur-oxidizing protein SoxY D ROLI_041370 hypothetical protein K17227 soxZ; sulfur-oxidizing protein SoxZ D ROLI_041350 hypothetical protein K17224 soxB; S-sulfosulfanyl-L-cysteine sulfohydrolase [EC:3.1.6.20] D ROLI_041340 hypothetical protein K17225 soxC; sulfane dehydrogenase subunit SoxC D ROLI_041330 hypothetical protein K22622 soxD; S-disulfanyl-L-cysteine oxidoreductase SoxD [EC:1.8.2.6] D ROLI_019860 sir; (GenBank) Sulfite reductase [ferredoxin] K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2] D ROLI_041310 fccB; (GenBank) Sulfide dehydrogenase [flavocytochrome c] flavoprotein chain K17229 fccB; sulfide dehydrogenase [flavocytochrome c] flavoprotein chain [EC:1.8.2.3] D ROLI_001790 sseA; (GenBank) 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D ROLI_028530 cysE; (GenBank) Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D ROLI_020240 mccA; (GenBank) O-acetylserine dependent cystathionine beta-synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D ROLI_023060 metAA; (GenBank) Homoserine O-acetyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31] D ROLI_020670 mgl; (GenBank) L-methionine gamma-lyase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D ROLI_008500 metZ; (GenBank) O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-] D ROLI_009700 mtoX; (GenBank) Methanethiol oxidase K17285 SELENBP1; methanethiol oxidase [EC:1.8.3.4] D ROLI_027770 dddP_2; (GenBank) Dimethlysulfonioproprionate lyase DddP K28067 dddP; dimethylpropiothetin dethiomethylase [EC:4.4.1.3] D ROLI_023640 dmdA; (GenBank) Dimethylsulfonioproprionate demethylase DmdA K17486 dmdA; dimethylsulfoniopropionate demethylase [EC:2.1.1.269] D ROLI_021310 dmdB; (GenBank) 3-methylmercaptopropionyl-CoA ligase K20034 dmdB; 3-(methylthio)propionyl---CoA ligase [EC:6.2.1.44] D ROLI_032530 Long-chain-fatty-acid--CoA ligase K20034 dmdB; 3-(methylthio)propionyl---CoA ligase [EC:6.2.1.44] D ROLI_031010 dmdC_1; (GenBank) 3-methylmercaptopropionyl-CoA dehydrogenase K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41] D ROLI_032460 dmdC_2; (GenBank) 3-methylmercaptopropionyl-CoA dehydrogenase K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:rfu00061] D ROLI_002980 accA; (GenBank) Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D ROLI_017720 accB; (GenBank) Biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D ROLI_017710 accC; (GenBank) Biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D ROLI_039890 accD; (GenBank) Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D ROLI_020490 acpP_1; (GenBank) Acyl carrier protein K02078 acpP; acyl carrier protein D ROLI_028760 acpP_2; (GenBank) Acyl carrier protein K02078 acpP; acyl carrier protein D ROLI_028780 fabD; (GenBank) Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D ROLI_019080 fabH; (GenBank) 3-oxoacyl-[acyl-carrier-protein] synthase 3 K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D ROLI_032090 fabB; (GenBank) 3-oxoacyl-[acyl-carrier-protein] synthase 1 K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D ROLI_028740 fabF_2; (GenBank) 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D ROLI_012550 fabG_2; (GenBank) 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D ROLI_028770 fabG_3; (GenBank) 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D ROLI_040790 tsaC1; (GenBank) 4-formylbenzenesulfonate dehydrogenase TsaC1/TsaC2 K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D ROLI_032080 fabA; (GenBank) 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14] D ROLI_023350 fabZ; (GenBank) 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D ROLI_018610 fabI_1; (GenBank) Enoyl-[acyl-carrier-protein] reductase [NADH] FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D ROLI_032100 fabI_2; (GenBank) Enoyl-[acyl-carrier-protein] reductase [NADH] FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D ROLI_000720 Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:rfu00071] D ROLI_003450 thlA; (GenBank) Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ROLI_006990 phaA_1; (GenBank) Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ROLI_026880 phaA_2; (GenBank) Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ROLI_032500 fadA; (GenBank) Putative acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ROLI_045040 bktB; (GenBank) Beta-ketothiolase BktB K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ROLI_032520 fadJ_2; (GenBank) Fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D ROLI_031590 fadJ_1; (GenBank) Fatty acid oxidation complex subunit alpha K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D ROLI_005340 carC_1; (GenBank) Caffeyl-CoA reductase-Etf complex subunit CarC K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D ROLI_026500 bbsG; (GenBank) (R)-benzylsuccinyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D ROLI_044350 putative acyl-CoA dehydrogenase fadE25 K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D ROLI_032470 mmgC; (GenBank) Acyl-CoA dehydrogenase K00255 ACADL; long-chain-acyl-CoA dehydrogenase [EC:1.3.8.8] D ROLI_032350 acdA_2; (GenBank) Acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D ROLI_000720 Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D ROLI_037670 alkB2; (GenBank) Alkane 1-monooxygenase 2 K00496 alkB1_2; alkane 1-monooxygenase [EC:1.14.15.3] D ROLI_001920 ddmA1; (GenBank) Dicamba O-demethylase 1, ferredoxin reductase component K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] D ROLI_015470 flhA_1; (GenBank) S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D ROLI_041970 flhA_3; (GenBank) S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D ROLI_003660 ald_2; (GenBank) 3-succinoylsemialdehyde-pyridine dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D ROLI_003940 betB_1; (GenBank) NAD/NADP-dependent betaine aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D ROLI_010250 puuC_1; (GenBank) NADP/NAD-dependent aldehyde dehydrogenase PuuC K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00073 Cutin, suberine and wax biosynthesis C 00074 Mycolic acid biosynthesis [PATH:rfu00074] D ROLI_004780 acpS; (GenBank) Holo-[acyl-carrier-protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D ROLI_020490 acpP_1; (GenBank) Acyl carrier protein K02078 acpP; acyl carrier protein D ROLI_028760 acpP_2; (GenBank) Acyl carrier protein K02078 acpP; acyl carrier protein D ROLI_028780 fabD; (GenBank) Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis [PATH:rfu00121] D ROLI_036970 bacC_2; (GenBank) Dihydroanticapsin 7-dehydrogenase K00076 hdhA; 7-alpha-hydroxysteroid dehydrogenase [EC:1.1.1.159] C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:rfu00561] D ROLI_009060 D-glycerate 2-kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D ROLI_003660 ald_2; (GenBank) 3-succinoylsemialdehyde-pyridine dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D ROLI_003940 betB_1; (GenBank) NAD/NADP-dependent betaine aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D ROLI_010250 puuC_1; (GenBank) NADP/NAD-dependent aldehyde dehydrogenase PuuC K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D ROLI_027250 dhaK-2; (GenBank) PTS-dependent dihydroxyacetone kinase 2, dihydroxyacetone-binding subunit DhaK K05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121] D ROLI_027260 dhaL; (GenBank) PTS-dependent dihydroxyacetone kinase, ADP-binding subunit DhaL K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121] D ROLI_017100 glpK; (GenBank) Glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D ROLI_019090 plsX; (GenBank) Phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D ROLI_031140 plsY; (GenBank) Glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D ROLI_007720 hypothetical protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D ROLI_009550 hypothetical protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D ROLI_017420 rafA; (GenBank) Alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] C 00564 Glycerophospholipid metabolism [PATH:rfu00564] D ROLI_044230 gpsA; (GenBank) Glycerol-3-phosphate dehydrogenase [NAD(P)+] K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D ROLI_017020 eryB; (GenBank) D-erythritol 1-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] D ROLI_031140 plsY; (GenBank) Glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D ROLI_007720 hypothetical protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D ROLI_009550 hypothetical protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D ROLI_024600 pldB_1; (GenBank) Lysophospholipase L2 K01048 pldB; lysophospholipase [EC:3.1.1.5] D ROLI_047080 pldB_2; (GenBank) Lysophospholipase L2 K01048 pldB; lysophospholipase [EC:3.1.1.5] D ROLI_010380 hypothetical protein K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D ROLI_023410 hypothetical protein K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D ROLI_026410 pcs; (GenBank) Phosphatidylcholine synthase K01004 pcs; phosphatidylcholine synthase [EC:2.7.8.24] D ROLI_012060 hypothetical protein K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D ROLI_012050 psd; (GenBank) Phosphatidylserine decarboxylase proenzyme K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D ROLI_034750 pgsA; (GenBank) CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D ROLI_021760 pgpA; (GenBank) Phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27] D ROLI_027120 egsA; (GenBank) Glycerol-1-phosphate dehydrogenase [NAD(P)+] K00096 araM; glycerol-1-phosphate dehydrogenase [NAD(P)+] [EC:1.1.1.261] C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism [PATH:rfu00600] D ROLI_017420 rafA; (GenBank) Alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism C 01040 Biosynthesis of unsaturated fatty acids [PATH:rfu01040] D ROLI_035790 tesA; (GenBank) Esterase TesA K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D ROLI_005990 putative acyl-CoA thioester hydrolase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-] B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:rfu00230] D ROLI_032560 deoB; (GenBank) Phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7] D ROLI_017270 pgm; (GenBank) Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D ROLI_007140 prs; (GenBank) Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D ROLI_012730 purF_1; (GenBank) Amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D ROLI_008390 purD; (GenBank) Phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D ROLI_023990 purN; (GenBank) Phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D ROLI_018310 purL; (GenBank) Phosphoribosylformylglycinamidine synthase subunit PurL K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3] D ROLI_023870 purS; (GenBank) Phosphoribosylformylglycinamidine synthase subunit PurS K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3] D ROLI_023860 purQ; (GenBank) Phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D ROLI_024000 purM; (GenBank) Phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D ROLI_007320 purK; (GenBank) N5-carboxyaminoimidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18] D ROLI_007330 purE; (GenBank) N5-carboxyaminoimidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D ROLI_023880 purC; (GenBank) Phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D ROLI_027850 purB; (GenBank) Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D ROLI_003890 purH; (GenBank) Bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D ROLI_025790 apt; (GenBank) Adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D ROLI_032380 yfkN_1; (GenBank) Trifunctional nucleotide phosphoesterase protein YfkN K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D ROLI_012700 surE; (GenBank) 5'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D ROLI_006670 deoD; (GenBank) Purine nucleoside phosphorylase DeoD-type K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1] D ROLI_007410 yfiH; (GenBank) Polyphenol oxidase K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D ROLI_021800 hpt; (GenBank) Hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D ROLI_021250 guaB; (GenBank) Inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D ROLI_019560 ndk; (GenBank) Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D ROLI_043840 dITP/XTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D ROLI_018590 gpt; (GenBank) Xanthine phosphoribosyltransferase K00769 gpt; xanthine phosphoribosyltransferase [EC:2.4.2.22] D ROLI_033760 hypothetical protein K13481 xdhA; xanthine dehydrogenase small subunit [EC:1.17.1.4] D ROLI_033770 xdhA; (GenBank) Putative xanthine dehydrogenase molybdenum-binding subunit XdhA K13482 xdhB; xanthine dehydrogenase large subunit [EC:1.17.1.4] D ROLI_029570 paoC; (GenBank) Aldehyde oxidoreductase molybdenum-binding subunit PaoC K11177 yagR; xanthine dehydrogenase YagR molybdenum-binding subunit [EC:1.17.1.4] D ROLI_029560 paoB; (GenBank) Aldehyde oxidoreductase FAD-binding subunit PaoB K11178 yagS; xanthine dehydrogenase YagS FAD-binding subunit [EC:1.17.1.4] D ROLI_029550 paoA; (GenBank) Aldehyde oxidoreductase iron-sulfur-binding subunit PaoA K13483 yagT; xanthine dehydrogenase YagT iron-sulfur-binding subunit D ROLI_021880 guaA; (GenBank) GMP synthase [glutamine-hydrolyzing] K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D ROLI_009330 guaD; (GenBank) Guanine deaminase K01487 guaD; guanine deaminase [EC:3.5.4.3] D ROLI_020650 gmk; (GenBank) Guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D ROLI_018670 hypothetical protein K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D ROLI_033690 hypothetical protein K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D ROLI_018980 Deoxyguanosinetriphosphate triphosphohydrolase-like protein K01129 dgt; dGTPase [EC:3.1.5.1] D ROLI_044170 hypothetical protein K06952 yfdR; 5'-nucleotidase [EC:3.1.3.89] D ROLI_004740 rsh; (GenBank) GTP pyrophosphokinase rsh K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D ROLI_022030 ppx; (GenBank) Exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D ROLI_028990 gppA; (GenBank) Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D ROLI_015740 hypothetical protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1] D ROLI_008230 purA; (GenBank) Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D ROLI_005280 amn; (GenBank) AMP nucleosidase K01241 amn; AMP nucleosidase [EC:3.2.2.4] D ROLI_005290 ade; (GenBank) Adenine deaminase K01486 ade; adenine deaminase [EC:3.5.4.2] D ROLI_037210 yfkN_2; (GenBank) Trifunctional nucleotide phosphoesterase protein YfkN K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6] D ROLI_009360 ymdB; (GenBank) 2',3'-cyclic-nucleotide 2'-phosphodiesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16] D ROLI_034080 adk; (GenBank) Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D ROLI_019360 mazG; (GenBank) Nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D ROLI_013920 cpdA_1; (GenBank) 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53] D ROLI_013930 cpdA_2; (GenBank) 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53] D ROLI_018050 cpdA_3; (GenBank) 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53] D ROLI_037850 cpdA_4; (GenBank) 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53] D ROLI_046150 sat_cysC; (GenBank) putative bifunctional SAT/APS kinase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] D ROLI_002740 pucM; (GenBank) 5-hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17] D ROLI_002730 hypothetical protein K16842 hpxB; allantoinase [EC:3.5.2.5] D ROLI_002700 allE; (GenBank) (S)-ureidoglycine aminohydrolase K14977 ylbA; (S)-ureidoglycine aminohydrolase [EC:3.5.3.26] D ROLI_002720 allA; (GenBank) Ureidoglycolate lyase K01483 allA; ureidoglycolate lyase [EC:4.3.2.3] D ROLI_015510 ureC1; (GenBank) Urease subunit alpha 1 K01428 ureC; urease subunit alpha [EC:3.5.1.5] D ROLI_015540 ureB1; (GenBank) Urease subunit beta 1 K01429 ureB; urease subunit beta [EC:3.5.1.5] D ROLI_015550 ureA; (GenBank) Urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5] C 00240 Pyrimidine metabolism [PATH:rfu00240] D ROLI_032730 carB; (GenBank) Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D ROLI_008750 carA_1; (GenBank) Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D ROLI_031100 pyrB; (GenBank) Aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D ROLI_018270 pyrC_1; (GenBank) Dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D ROLI_031130 pyrC_2; (GenBank) Dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D ROLI_032400 pyrD; (GenBank) Dihydroorotate dehydrogenase (quinone) K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2] D ROLI_018260 pyrE; (GenBank) Orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D ROLI_000890 pyrF; (GenBank) Orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D ROLI_023440 pyrH; (GenBank) Uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D ROLI_019560 ndk; (GenBank) Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D ROLI_019360 mazG; (GenBank) Nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D ROLI_030470 yhdE; (GenBank) dTTP/UTP pyrophosphatase K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D ROLI_043930 yceF; (GenBank) 7-methyl-GTP pyrophosphatase K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D ROLI_008170 pyrG; (GenBank) CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2] D ROLI_031980 cmk; (GenBank) Cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D ROLI_032380 yfkN_1; (GenBank) Trifunctional nucleotide phosphoesterase protein YfkN K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D ROLI_012700 surE; (GenBank) 5'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D ROLI_032550 upp; (GenBank) Uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D ROLI_037210 yfkN_2; (GenBank) Trifunctional nucleotide phosphoesterase protein YfkN K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6] D ROLI_009360 ymdB; (GenBank) 2',3'-cyclic-nucleotide 2'-phosphodiesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16] D ROLI_021470 psuG; (GenBank) Pseudouridine-5'-phosphate glycosidase K16329 psuG; pseudouridylate synthase [EC:4.2.1.70] D ROLI_032580 cdd; (GenBank) Cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5] D ROLI_016960 codAch2; (GenBank) Pterin deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21] D ROLI_035050 codA; (GenBank) Cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21] D ROLI_019040 dcd; (GenBank) dCTP deaminase, dUMP-forming K01494 dcd; dCTP deaminase [EC:3.5.4.13] D ROLI_018670 hypothetical protein K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D ROLI_033690 hypothetical protein K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D ROLI_044170 hypothetical protein K06952 yfdR; 5'-nucleotidase [EC:3.1.3.89] D ROLI_010300 tmk; (GenBank) Thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D ROLI_036080 dut; (GenBank) Deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D ROLI_032570 deoA; (GenBank) Thymidine phosphorylase K00758 deoA; thymidine phosphorylase [EC:2.4.2.4] D ROLI_032780 tdk; (GenBank) Thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21] D ROLI_006250 thyX; (GenBank) Flavin-dependent thymidylate synthase K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] D ROLI_035770 preT; (GenBank) NAD-dependent dihydropyrimidine dehydrogenase subunit PreT K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1] D ROLI_035760 preA; (GenBank) NAD-dependent dihydropyrimidine dehydrogenase subunit PreA K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1] D ROLI_035710 dht; (GenBank) D-hydantoinase/dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D ROLI_035730 hyuC; (GenBank) N-carbamoyl-L-amino-acid hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] D ROLI_026710 rutB_2; (GenBank) Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB K09020 rutB; ureidoacrylate peracid hydrolase [EC:3.5.1.110] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:rfu00250] D ROLI_006320 Aspartate/prephenate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D ROLI_001800 tyrB; (GenBank) Aromatic-amino-acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D ROLI_027710 Aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] D ROLI_044540 hypothetical protein K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D ROLI_015200 sgaA_1; (GenBank) Serine--glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D ROLI_025320 sgaA_3; (GenBank) Serine--glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D ROLI_028300 sgaA_4; (GenBank) Serine--glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D ROLI_003230 ald_1; (GenBank) Alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D ROLI_043760 argG; (GenBank) Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D ROLI_007630 argH; (GenBank) Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D ROLI_008230 purA; (GenBank) Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D ROLI_027850 purB; (GenBank) Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D ROLI_031100 pyrB; (GenBank) Aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D ROLI_040550 davT; (GenBank) 5-aminovalerate aminotransferase DavT K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D ROLI_001680 davD; (GenBank) Glutarate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D ROLI_047430 gabD1; (GenBank) Succinate-semialdehyde dehydrogenase [NADP(+)] 1 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D ROLI_005170 gltB; (GenBank) Glutamate synthase [NADPH] large chain K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D ROLI_005140 gltD; (GenBank) Glutamate synthase [NADPH] small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D ROLI_024980 gdhA_1; (GenBank) Glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D ROLI_029630 gdhA_2; (GenBank) NAD(P)-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D ROLI_014740 putA; (GenBank) Bifunctional protein PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D ROLI_008050 puuA_1; (GenBank) Gamma-glutamylputrescine synthetase PuuA K01915 glnA; glutamine synthetase [EC:6.3.1.2] D ROLI_008070 puuA_2; (GenBank) Gamma-glutamylputrescine synthetase PuuA K01915 glnA; glutamine synthetase [EC:6.3.1.2] D ROLI_026690 glnA_1; (GenBank) Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D ROLI_027740 glnA_2; (GenBank) Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D ROLI_031410 ipuC; (GenBank) Glutamate--isopropylamine ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D ROLI_041750 glnT; (GenBank) Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D ROLI_032730 carB; (GenBank) Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D ROLI_008750 carA_1; (GenBank) Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D ROLI_023860 purQ; (GenBank) Phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D ROLI_010070 glmS; (GenBank) Glutamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D ROLI_011950 nodM; (GenBank) Glutamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D ROLI_012730 purF_1; (GenBank) Amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:rfu00260] D ROLI_025670 lysC; (GenBank) Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D ROLI_039670 asd2; (GenBank) Aspartate-semialdehyde dehydrogenase 2 K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D ROLI_012860 hom; (GenBank) Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D ROLI_025840 thrC; (GenBank) Threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D ROLI_007170 ltaE; (GenBank) Low specificity L-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48] D ROLI_001130 glyA2_1; (GenBank) Serine hydroxymethyltransferase 2 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D ROLI_032670 glyA2_2; (GenBank) Serine hydroxymethyltransferase 2 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D ROLI_015200 sgaA_1; (GenBank) Serine--glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D ROLI_025320 sgaA_3; (GenBank) Serine--glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D ROLI_028300 sgaA_4; (GenBank) Serine--glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D ROLI_036050 ghrA; (GenBank) Glyoxylate/hydroxypyruvate reductase A K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81] D ROLI_009060 D-glycerate 2-kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D ROLI_039960 gpmI; (GenBank) 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D ROLI_044990 serA; (GenBank) D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D ROLI_044980 serC; (GenBank) Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D ROLI_000330 hypothetical protein K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D ROLI_045010 tdh; (GenBank) L-threonine 3-dehydrogenase K00060 tdh; threonine 3-dehydrogenase [EC:1.1.1.103] D ROLI_001970 hemA_1; (GenBank) 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37] D ROLI_002600 hemA_2; (GenBank) 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37] D ROLI_022810 hemA_3; (GenBank) 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37] D ROLI_013720 hypothetical protein K00274 MAO; monoamine oxidase [EC:1.4.3.4] D ROLI_013790 hypothetical protein K00274 MAO; monoamine oxidase [EC:1.4.3.4] D ROLI_035820 gcvP; (GenBank) Glycine dehydrogenase (decarboxylating) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D ROLI_035840 gcvT_1; (GenBank) Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D ROLI_041690 gcvT_2; (GenBank) Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D ROLI_041800 gcvT_3; (GenBank) Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D ROLI_007740 lpd3; (GenBank) Dihydrolipoyl dehydrogenase 3 K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D ROLI_024290 lpd; (GenBank) Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D ROLI_026850 lpdA; (GenBank) Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D ROLI_035830 gcvH; (GenBank) Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D ROLI_006550 Creatinase K08688 E3.5.3.3; creatinase [EC:3.5.3.3] D ROLI_012060 hypothetical protein K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D ROLI_029280 betA; (GenBank) Oxygen-dependent choline dehydrogenase K00108 betA; choline dehydrogenase [EC:1.1.99.1] D ROLI_029290 betB_2; (GenBank) NAD/NADP-dependent betaine aldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8] D ROLI_003500 abo_1; (GenBank) 4-methylaminobutanoate oxidase (formaldehyde-forming) K00315 DMGDH; dimethylglycine dehydrogenase [EC:1.5.8.4] D ROLI_003540 dmg; (GenBank) Dimethylglycine oxidase K00315 DMGDH; dimethylglycine dehydrogenase [EC:1.5.8.4] D ROLI_022160 abo_3; (GenBank) 4-methylaminobutanoate oxidase (formaldehyde-forming) K00315 DMGDH; dimethylglycine dehydrogenase [EC:1.5.8.4] D ROLI_023610 abo_4; (GenBank) 4-methylaminobutanoate oxidase (formaldehyde-forming) K00315 DMGDH; dimethylglycine dehydrogenase [EC:1.5.8.4] D ROLI_031200 abo_6; (GenBank) 4-methylaminobutanoate oxidase (formaldehyde-forming) K00315 DMGDH; dimethylglycine dehydrogenase [EC:1.5.8.4] D ROLI_008010 soxA_1; (GenBank) Sarcosine oxidase subunit alpha K00302 soxA; sarcosine oxidase, subunit alpha [EC:1.5.3.24 1.5.3.1] D ROLI_007990 soxB_1; (GenBank) Sarcosine oxidase subunit beta K00303 soxB; sarcosine oxidase, subunit beta [EC:1.5.3.24 1.5.3.1] D ROLI_008020 hypothetical protein K00305 soxG; sarcosine oxidase, subunit gamma [EC:1.5.3.24 1.5.3.1] D ROLI_008000 soxD_1; (GenBank) Sarcosine oxidase subunit delta K00304 soxD; sarcosine oxidase, subunit delta [EC:1.5.3.24 1.5.3.1] D ROLI_008280 tdcG; (GenBank) L-serine dehydratase TdcG K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D ROLI_032150 thadh_2; (GenBank) L-threo-3-hydroxyaspartate ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D ROLI_043750 ilvA; (GenBank) L-threonine dehydratase biosynthetic IlvA K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D ROLI_029810 bar; (GenBank) Broad specificity amino-acid racemase K25317 alr; amino-acid racemase [EC:5.1.1.10] D ROLI_031790 trpA; (GenBank) Tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D ROLI_031880 trpB; (GenBank) Tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D ROLI_031160 ectC; (GenBank) L-ectoine synthase K06720 ectC; L-ectoine synthase [EC:4.2.1.108] D ROLI_015790 doeA; (GenBank) Ectoine hydrolase K15783 doeA; ectoine hydrolase [EC:3.5.4.44] D ROLI_015780 doeB; (GenBank) N-alpha-acetyl-L-2,4-diaminobutyric acid deacetylase K15784 doeB; N2-acetyl-L-2,4-diaminobutanoate deacetylase [EC:3.5.1.125] D ROLI_015770 spuC_2; (GenBank) Putrescine--pyruvate aminotransferase K15785 doeD; L-2,4-diaminobutyrate transaminase [EC:2.6.1.76] C 00270 Cysteine and methionine metabolism [PATH:rfu00270] D ROLI_028530 cysE; (GenBank) Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D ROLI_020240 mccA; (GenBank) O-acetylserine dependent cystathionine beta-synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D ROLI_004440 patB; (GenBank) Cystathionine beta-lyase PatB K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D ROLI_022060 hypothetical protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D ROLI_023900 metH_1; (GenBank) Methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D ROLI_032220 hypothetical protein K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D ROLI_032010 metK; (GenBank) S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D ROLI_006740 hypothetical protein K20249 raiI; acyl homoserine lactone synthase [EC:2.3.1.184] D ROLI_027310 mtnK; (GenBank) Methylthioribose kinase K00899 mtnK; 5-methylthioribose kinase [EC:2.7.1.100] D ROLI_025750 mtnP; (GenBank) S-methyl-5'-thioadenosine phosphorylase K00772 mtaP; 5'-methylthioadenosine phosphorylase [EC:2.4.2.28] D ROLI_007410 yfiH; (GenBank) Polyphenol oxidase K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D ROLI_027300 mtnA; (GenBank) Methylthioribose-1-phosphate isomerase K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23] D ROLI_003460 msrC; (GenBank) Free methionine-R-sulfoxide reductase K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14] D ROLI_021280 hhaIM; (GenBank) Modification methylase HhaI K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D ROLI_033210 dcm; (GenBank) DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D ROLI_044180 ahcY; (GenBank) Adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D ROLI_025670 lysC; (GenBank) Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D ROLI_039670 asd2; (GenBank) Aspartate-semialdehyde dehydrogenase 2 K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D ROLI_012860 hom; (GenBank) Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D ROLI_023060 metAA; (GenBank) Homoserine O-acetyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31] D ROLI_020670 mgl; (GenBank) L-methionine gamma-lyase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D ROLI_015130 O-acetyl-L-homoserine sulfhydrylase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] D ROLI_008500 metZ; (GenBank) O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-] D ROLI_005440 ilvE_1; (GenBank) Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D ROLI_015260 ilvE_2; (GenBank) Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D ROLI_030800 ilvE_3; (GenBank) Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D ROLI_034660 egtA; (GenBank) Glutamate--cysteine ligase EgtA K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D ROLI_036160 gshB_2; (GenBank) Glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3] D ROLI_006320 Aspartate/prephenate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D ROLI_001800 tyrB; (GenBank) Aromatic-amino-acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D ROLI_001790 sseA; (GenBank) 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D ROLI_029810 bar; (GenBank) Broad specificity amino-acid racemase K25317 alr; amino-acid racemase [EC:5.1.1.10] D ROLI_007900 mdh_1; (GenBank) Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D ROLI_028910 comC; (GenBank) (2R)-3-sulfolactate dehydrogenase (NADP(+)) K16844 comC; (2R)-3-sulfolactate dehydrogenase (NADP+) [EC:1.1.1.338] D ROLI_027700 cuyA; (GenBank) L-cysteate sulfo-lyase K17950 cuyA; L-cysteate sulfo-lyase [EC:4.4.1.25] D ROLI_008280 tdcG; (GenBank) L-serine dehydratase TdcG K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D ROLI_044990 serA; (GenBank) D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D ROLI_044980 serC; (GenBank) Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00280 Valine, leucine and isoleucine degradation [PATH:rfu00280] D ROLI_005440 ilvE_1; (GenBank) Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D ROLI_015260 ilvE_2; (GenBank) Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D ROLI_030800 ilvE_3; (GenBank) Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D ROLI_032340 dxs_3; (GenBank) 1-deoxy-D-xylulose-5-phosphate synthase K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4] D ROLI_007740 lpd3; (GenBank) Dihydrolipoyl dehydrogenase 3 K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D ROLI_024290 lpd; (GenBank) Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D ROLI_026850 lpdA; (GenBank) Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D ROLI_005340 carC_1; (GenBank) Caffeyl-CoA reductase-Etf complex subunit CarC K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D ROLI_026500 bbsG; (GenBank) (R)-benzylsuccinyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D ROLI_044350 putative acyl-CoA dehydrogenase fadE25 K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D ROLI_009390 bcd_1; (GenBank) Acyl-CoA dehydrogenase, short-chain specific K00253 IVD; isovaleryl-CoA dehydrogenase [EC:1.3.8.4] D ROLI_032520 fadJ_2; (GenBank) Fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D ROLI_029070 accA1_2; (GenBank) Acetyl-/propionyl-coenzyme A carboxylase alpha chain K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3] D ROLI_029130 pccB; (GenBank) Propionyl-CoA carboxylase beta chain K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15] D ROLI_036280 epi; (GenBank) Ethylmalonyl-CoA/methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D ROLI_029040 mcm; (GenBank) Methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D ROLI_012910 Hgd; (GenBank) 2-(hydroxymethyl)glutarate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] D ROLI_024230 bauC; (GenBank) Putative 3-oxopropanoate dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D ROLI_003660 ald_2; (GenBank) 3-succinoylsemialdehyde-pyridine dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D ROLI_003940 betB_1; (GenBank) NAD/NADP-dependent betaine aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D ROLI_010250 puuC_1; (GenBank) NADP/NAD-dependent aldehyde dehydrogenase PuuC K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D ROLI_016810 lcfB_2; (GenBank) Long-chain-fatty-acid--CoA ligase K18661 matB; malonyl-CoA/methylmalonyl-CoA synthetase [EC:6.2.1.76 6.2.1.-] D ROLI_040550 davT; (GenBank) 5-aminovalerate aminotransferase DavT K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D ROLI_009410 accA1_1; (GenBank) Acetyl-/propionyl-coenzyme A carboxylase alpha chain K01968 MCCC1; 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4] D ROLI_009400 Methylmalonyl-CoA carboxyltransferase 12S subunit K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4] D ROLI_009430 echA8_1; (GenBank) putative enoyl-CoA hydratase echA8 K13766 liuC; methylglutaconyl-CoA hydratase [EC:4.2.1.18] D ROLI_012030 liuE; (GenBank) 3-hydroxy-3-isohexenylglutaryl-CoA/hydroxy-methylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D ROLI_015750 scoA; (GenBank) putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5] D ROLI_015760 scoB; (GenBank) putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] D ROLI_003450 thlA; (GenBank) Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ROLI_006990 phaA_1; (GenBank) Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ROLI_026880 phaA_2; (GenBank) Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ROLI_032500 fadA; (GenBank) Putative acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ROLI_045040 bktB; (GenBank) Beta-ketothiolase BktB K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ROLI_021600 C 00290 Valine, leucine and isoleucine biosynthesis [PATH:rfu00290] D ROLI_032150 thadh_2; (GenBank) L-threo-3-hydroxyaspartate ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D ROLI_043750 ilvA; (GenBank) L-threonine dehydratase biosynthetic IlvA K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D ROLI_001340 leuC; (GenBank) 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D ROLI_001330 leuD1; (GenBank) 3-isopropylmalate dehydratase small subunit 1 K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D ROLI_001300 leuB_1; (GenBank) 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D ROLI_015590 leuB_2; (GenBank) 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D ROLI_022640 ilvI; (GenBank) Acetolactate synthase isozyme 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D ROLI_029640 alsS_1; (GenBank) Acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D ROLI_030600 alsS_2; (GenBank) Acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D ROLI_022660 ilvH; (GenBank) Acetolactate synthase isozyme 3 small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D ROLI_008660 ilvC; (GenBank) Ketol-acid reductoisomerase (NADP(+)) K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D ROLI_039920 ilvD; (GenBank) Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D ROLI_005440 ilvE_1; (GenBank) Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D ROLI_015260 ilvE_2; (GenBank) Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D ROLI_030800 ilvE_3; (GenBank) Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D ROLI_018770 cimA; (GenBank) (R)-citramalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D ROLI_035980 leuA; (GenBank) 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D ROLI_016900 thadh_1; (GenBank) L-threo-3-hydroxyaspartate ammonia-lyase K28180 bhcB; beta-hydroxyaspartate dehydratase [EC:4.2.1.-] C 00300 Lysine biosynthesis [PATH:rfu00300] D ROLI_012860 hom; (GenBank) Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D ROLI_025670 lysC; (GenBank) Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D ROLI_039670 asd2; (GenBank) Aspartate-semialdehyde dehydrogenase 2 K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D ROLI_015330 dapA_1; (GenBank) 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D ROLI_015350 dapA_2; (GenBank) 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D ROLI_039440 dapA_3; (GenBank) 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D ROLI_003840 dapB; (GenBank) 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D ROLI_000410 dapD; (GenBank) 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117] D ROLI_030560 argD_2; (GenBank) Acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D ROLI_000430 dapE_1; (GenBank) Succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D ROLI_040710 dapE_3; (GenBank) Succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D ROLI_005660 dapF; (GenBank) Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D ROLI_007670 lysA; (GenBank) Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D ROLI_004280 hypothetical protein K00290 LYS1; saccharopine dehydrogenase (NAD+, L-lysine forming) [EC:1.5.1.7] D ROLI_011430 murE; (GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D ROLI_011440 murF; (GenBank) UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:rfu00310] D ROLI_004280 hypothetical protein K00290 LYS1; saccharopine dehydrogenase (NAD+, L-lysine forming) [EC:1.5.1.7] D ROLI_007790 sucB; (GenBank) Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D ROLI_007740 lpd3; (GenBank) Dihydrolipoyl dehydrogenase 3 K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D ROLI_024290 lpd; (GenBank) Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D ROLI_026850 lpdA; (GenBank) Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D ROLI_032350 acdA_2; (GenBank) Acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D ROLI_032520 fadJ_2; (GenBank) Fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D ROLI_003450 thlA; (GenBank) Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ROLI_006990 phaA_1; (GenBank) Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ROLI_026880 phaA_2; (GenBank) Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ROLI_032500 fadA; (GenBank) Putative acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ROLI_045040 bktB; (GenBank) Beta-ketothiolase BktB K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ROLI_029810 bar; (GenBank) Broad specificity amino-acid racemase K25317 alr; amino-acid racemase [EC:5.1.1.10] D ROLI_040550 davT; (GenBank) 5-aminovalerate aminotransferase DavT K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D ROLI_001680 davD; (GenBank) Glutarate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D ROLI_047430 gabD1; (GenBank) Succinate-semialdehyde dehydrogenase [NADP(+)] 1 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D ROLI_037630 uctC_2; (GenBank) Acetyl-CoA:oxalate CoA-transferase K01041 gcdG; glutaryl-CoA transferase [EC:2.8.3.-] D ROLI_003050 dat; (GenBank) D-alanine aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21] D ROLI_003660 ald_2; (GenBank) 3-succinoylsemialdehyde-pyridine dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D ROLI_003940 betB_1; (GenBank) NAD/NADP-dependent betaine aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D ROLI_010250 puuC_1; (GenBank) NADP/NAD-dependent aldehyde dehydrogenase PuuC K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00220 Arginine biosynthesis [PATH:rfu00220] D ROLI_030550 argF; (GenBank) Ornithine carbamoyltransferase, anabolic K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D ROLI_043760 argG; (GenBank) Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D ROLI_007630 argH; (GenBank) Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D ROLI_022280 arcA_1; (GenBank) Arginase K01476 rocF; arginase [EC:3.5.3.1] D ROLI_038470 pxpC; (GenBank) 5-oxoprolinase subunit C K01457 atzF; allophanate hydrolase [EC:3.5.1.54] D ROLI_015510 ureC1; (GenBank) Urease subunit alpha 1 K01428 ureC; urease subunit alpha [EC:3.5.1.5] D ROLI_015540 ureB1; (GenBank) Urease subunit beta 1 K01429 ureB; urease subunit beta [EC:3.5.1.5] D ROLI_015550 ureA; (GenBank) Urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5] D ROLI_023860 purQ; (GenBank) Phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D ROLI_008050 puuA_1; (GenBank) Gamma-glutamylputrescine synthetase PuuA K01915 glnA; glutamine synthetase [EC:6.3.1.2] D ROLI_008070 puuA_2; (GenBank) Gamma-glutamylputrescine synthetase PuuA K01915 glnA; glutamine synthetase [EC:6.3.1.2] D ROLI_026690 glnA_1; (GenBank) Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D ROLI_027740 glnA_2; (GenBank) Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D ROLI_031410 ipuC; (GenBank) Glutamate--isopropylamine ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D ROLI_041750 glnT; (GenBank) Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D ROLI_032730 carB; (GenBank) Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D ROLI_008750 carA_1; (GenBank) Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D ROLI_024980 gdhA_1; (GenBank) Glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D ROLI_029630 gdhA_2; (GenBank) NAD(P)-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D ROLI_006320 Aspartate/prephenate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D ROLI_001800 tyrB; (GenBank) Aromatic-amino-acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D ROLI_043450 oat2; (GenBank) Glutamate N-acetyltransferase 2 K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] D ROLI_033900 argB; (GenBank) Acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D ROLI_018370 argC; (GenBank) N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D ROLI_030560 argD_2; (GenBank) Acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D ROLI_011880 argE; (GenBank) Acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16] C 00330 Arginine and proline metabolism [PATH:rfu00330] D ROLI_017000 mftE; (GenBank) Putative mycofactocin system creatinine amidohydrolase family protein MftE K01470 E3.5.2.10; creatinine amidohydrolase [EC:3.5.2.10] D ROLI_016960 codAch2; (GenBank) Pterin deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21] D ROLI_035050 codA; (GenBank) Cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21] D ROLI_037770 hypothetical protein K01474 hyuB; N-methylhydantoinase B [EC:3.5.2.14] D ROLI_006550 Creatinase K08688 E3.5.3.3; creatinase [EC:3.5.3.3] D ROLI_019380 speB; (GenBank) Agmatinase K01480 speB; agmatinase [EC:3.5.3.11] D ROLI_021260 pah; (GenBank) Proclavaminate amidinohydrolase K01480 speB; agmatinase [EC:3.5.3.11] D ROLI_037270 ldc; (GenBank) Lysine/ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D ROLI_000540 spuC_1; (GenBank) Putrescine--pyruvate aminotransferase K12256 spuC; putrescine---pyruvate transaminase [EC:2.6.1.113] D ROLI_003660 ald_2; (GenBank) 3-succinoylsemialdehyde-pyridine dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D ROLI_003940 betB_1; (GenBank) NAD/NADP-dependent betaine aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D ROLI_010250 puuC_1; (GenBank) NADP/NAD-dependent aldehyde dehydrogenase PuuC K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D ROLI_013720 hypothetical protein K00274 MAO; monoamine oxidase [EC:1.4.3.4] D ROLI_013790 hypothetical protein K00274 MAO; monoamine oxidase [EC:1.4.3.4] D ROLI_018750 aruH; (GenBank) Arginine--pyruvate transaminase AruH K12252 aruH; arginine:pyruvate transaminase [EC:2.6.1.84] D ROLI_008540 aruI; (GenBank) putative 2-ketoarginine decarboxylase AruI K12253 aruI; 5-guanidino-2-oxopentanoate decarboxylase [EC:4.1.1.75] D ROLI_019390 gbuA_2; (GenBank) Guanidinobutyrase K12255 gbuA; guanidinobutyrase [EC:3.5.3.7] D ROLI_022720 aam; (GenBank) Acylamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D ROLI_008040 puuB_1; (GenBank) Gamma-glutamylputrescine oxidoreductase K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-] D ROLI_013350 puuC_2; (GenBank) NADP/NAD-dependent aldehyde dehydrogenase PuuC K09472 puuC; 4-(gamma-glutamylamino)butanal dehydrogenase [EC:1.2.1.99] D ROLI_013830 puuC_3; (GenBank) NADP/NAD-dependent aldehyde dehydrogenase PuuC K09472 puuC; 4-(gamma-glutamylamino)butanal dehydrogenase [EC:1.2.1.99] D ROLI_022280 arcA_1; (GenBank) Arginase K01476 rocF; arginase [EC:3.5.3.1] D ROLI_007460 proC; (GenBank) Pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D ROLI_014740 putA; (GenBank) Bifunctional protein PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D ROLI_022290 ocd; (GenBank) Ornithine cyclodeaminase K01750 ocd; ornithine cyclodeaminase [EC:4.3.1.12] D ROLI_020360 proB; (GenBank) Glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D ROLI_020370 proA; (GenBank) Gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] D ROLI_043530 pip; (GenBank) Proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5] D ROLI_006320 Aspartate/prephenate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D ROLI_001800 tyrB; (GenBank) Aromatic-amino-acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D ROLI_003050 dat; (GenBank) D-alanine aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21] C 00340 Histidine metabolism [PATH:rfu00340] D ROLI_033710 hisG; (GenBank) ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D ROLI_033720 hisZ; (GenBank) ATP phosphoribosyltransferase regulatory subunit K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit D ROLI_009800 hisE; (GenBank) Phosphoribosyl-ATP pyrophosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31] D ROLI_023240 hisI; (GenBank) Phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19] D ROLI_009830 hisA; (GenBank) 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] D ROLI_009850 hisH; (GenBank) Imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D ROLI_009810 hisF; (GenBank) Imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D ROLI_009860 hisB; (GenBank) Histidine biosynthesis bifunctional protein HisB K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] D ROLI_025300 hisC_2; (GenBank) Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D ROLI_035620 hisC_3; (GenBank) Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D ROLI_006080 hisD; (GenBank) Histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] D ROLI_006540 8-oxoguanine deaminase K05603 hutF; formimidoylglutamate deiminase [EC:3.5.3.13] D ROLI_026550 hypothetical protein K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68] D ROLI_003660 ald_2; (GenBank) 3-succinoylsemialdehyde-pyridine dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D ROLI_003940 betB_1; (GenBank) NAD/NADP-dependent betaine aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D ROLI_010250 puuC_1; (GenBank) NADP/NAD-dependent aldehyde dehydrogenase PuuC K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D ROLI_013720 hypothetical protein K00274 MAO; monoamine oxidase [EC:1.4.3.4] D ROLI_013790 hypothetical protein K00274 MAO; monoamine oxidase [EC:1.4.3.4] C 00350 Tyrosine metabolism [PATH:rfu00350] D ROLI_006320 Aspartate/prephenate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D ROLI_001800 tyrB; (GenBank) Aromatic-amino-acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D ROLI_025300 hisC_2; (GenBank) Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D ROLI_035620 hisC_3; (GenBank) Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D ROLI_029210 hmgA; (GenBank) Homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5] D ROLI_029250 hypothetical protein K01555 FAH; fumarylacetoacetase [EC:3.7.1.2] D ROLI_013720 hypothetical protein K00274 MAO; monoamine oxidase [EC:1.4.3.4] D ROLI_013790 hypothetical protein K00274 MAO; monoamine oxidase [EC:1.4.3.4] D ROLI_015470 flhA_1; (GenBank) S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D ROLI_041970 flhA_3; (GenBank) S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D ROLI_039660 bphF; (GenBank) 4-hydroxy-2-oxovalerate aldolase K02510 hpaI; 4-hydroxy-2-oxoheptanedioate aldolase [EC:4.1.2.52] D ROLI_001680 davD; (GenBank) Glutarate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D ROLI_047430 gabD1; (GenBank) Succinate-semialdehyde dehydrogenase [NADP(+)] 1 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D ROLI_039340 ycgM; (GenBank) putative protein YcgM K16165 nagK; fumarylpyruvate hydrolase [EC:3.7.1.20] C 00360 Phenylalanine metabolism [PATH:rfu00360] D ROLI_013720 hypothetical protein K00274 MAO; monoamine oxidase [EC:1.4.3.4] D ROLI_013790 hypothetical protein K00274 MAO; monoamine oxidase [EC:1.4.3.4] D ROLI_039130 paaK; (GenBank) Phenylacetate-coenzyme A ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30] D ROLI_039140 paaI; (GenBank) Acyl-coenzyme A thioesterase PaaI K02614 paaI; acyl-CoA thioesterase [EC:3.1.2.-] D ROLI_039060 paaA_1; (GenBank) 1,2-phenylacetyl-CoA epoxidase, subunit A K02609 paaA; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA [EC:1.14.13.149] D ROLI_039070 paaB; (GenBank) 1,2-phenylacetyl-CoA epoxidase, subunit B K02610 paaB; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB D ROLI_039080 paaC; (GenBank) 1,2-phenylacetyl-CoA epoxidase, subunit C K02611 paaC; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaC [EC:1.14.13.149] D ROLI_039090 paaD; (GenBank) Putative 1,2-phenylacetyl-CoA epoxidase, subunit D K02612 paaD; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD D ROLI_039100 paaE; (GenBank) 1,2-phenylacetyl-CoA epoxidase, subunit E K02613 paaE; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE D ROLI_018430 paaG; (GenBank) 1,2-epoxyphenylacetyl-CoA isomerase K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18] D ROLI_039150 paaZ; (GenBank) Bifunctional protein PaaZ K02618 paaZ; oxepin-CoA hydrolase / 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase [EC:3.3.2.12 1.2.1.91] D ROLI_004980 mmgB; (GenBank) putative 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D ROLI_006320 Aspartate/prephenate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D ROLI_001800 tyrB; (GenBank) Aromatic-amino-acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D ROLI_025300 hisC_2; (GenBank) Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D ROLI_035620 hisC_3; (GenBank) Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D ROLI_003050 dat; (GenBank) D-alanine aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21] D ROLI_034970 katG; (GenBank) Catalase-peroxidase K03782 katG; catalase-peroxidase [EC:1.11.1.21] D ROLI_022720 aam; (GenBank) Acylamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D ROLI_001920 ddmA1; (GenBank) Dicamba O-demethylase 1, ferredoxin reductase component K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] D ROLI_009450 mhpA; (GenBank) 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase K05712 mhpA; 3-(3-hydroxy-phenyl)propionate hydroxylase [EC:1.14.13.127] C 00380 Tryptophan metabolism [PATH:rfu00380] D ROLI_017500 kynA; (GenBank) Tryptophan 2,3-dioxygenase K00453 TDO2; tryptophan 2,3-dioxygenase [EC:1.13.11.11] D ROLI_017510 kynU; (GenBank) Kynureninase K01556 KYNU; kynureninase [EC:3.7.1.3] D ROLI_007790 sucB; (GenBank) Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D ROLI_007740 lpd3; (GenBank) Dihydrolipoyl dehydrogenase 3 K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D ROLI_024290 lpd; (GenBank) Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D ROLI_026850 lpdA; (GenBank) Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D ROLI_032350 acdA_2; (GenBank) Acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D ROLI_032520 fadJ_2; (GenBank) Fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D ROLI_003450 thlA; (GenBank) Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ROLI_006990 phaA_1; (GenBank) Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ROLI_026880 phaA_2; (GenBank) Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ROLI_032500 fadA; (GenBank) Putative acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ROLI_045040 bktB; (GenBank) Beta-ketothiolase BktB K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ROLI_013720 hypothetical protein K00274 MAO; monoamine oxidase [EC:1.4.3.4] D ROLI_013790 hypothetical protein K00274 MAO; monoamine oxidase [EC:1.4.3.4] D ROLI_003660 ald_2; (GenBank) 3-succinoylsemialdehyde-pyridine dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D ROLI_003940 betB_1; (GenBank) NAD/NADP-dependent betaine aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D ROLI_010250 puuC_1; (GenBank) NADP/NAD-dependent aldehyde dehydrogenase PuuC K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D ROLI_008190 Low-molecular weight cobalt-containing nitrile hydratase subunit alpha K01721 nthA; nitrile hydratase subunit alpha [EC:4.2.1.84] D ROLI_008200 Low-molecular weight cobalt-containing nitrile hydratase subunit beta K20807 nthB; nitrile hydratase subunit beta [EC:4.2.1.84] D ROLI_022720 aam; (GenBank) Acylamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D ROLI_034970 katG; (GenBank) Catalase-peroxidase K03782 katG; catalase-peroxidase [EC:1.11.1.21] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:rfu00400] D ROLI_020620 aroH; (GenBank) Phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D ROLI_023530 aroB; (GenBank) 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D ROLI_020450 aroQ; (GenBank) 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D ROLI_043940 aroE; (GenBank) Shikimate dehydrogenase (NADP(+)) K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D ROLI_023540 aroK_1; (GenBank) Shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D ROLI_031990 aroA; (GenBank) 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D ROLI_005500 aroC; (GenBank) Chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D ROLI_018560 trpE; (GenBank) Anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D ROLI_018530 carA_2; (GenBank) Carbamoyl-phosphate synthase small chain K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D ROLI_018520 trpD; (GenBank) Anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D ROLI_031900 trpF; (GenBank) N-(5'-phosphoribosyl)anthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24] D ROLI_018500 trpC; (GenBank) Indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48] D ROLI_031790 trpA; (GenBank) Tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D ROLI_031880 trpB; (GenBank) Tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D ROLI_036650 hypothetical protein K04092 tyrA1; chorismate mutase [EC:5.4.99.5] D ROLI_035610 tyrC; (GenBank) Cyclohexadienyl dehydrogenase K00220 tyrC; cyclohexadieny/prephenate dehydrogenase [EC:1.3.1.43 1.3.1.12] D ROLI_037180 pheA; (GenBank) Bifunctional chorismate mutase/prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51] D ROLI_006320 Aspartate/prephenate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D ROLI_001800 tyrB; (GenBank) Aromatic-amino-acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D ROLI_025300 hisC_2; (GenBank) Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D ROLI_035620 hisC_3; (GenBank) Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:rfu00410] D ROLI_040550 davT; (GenBank) 5-aminovalerate aminotransferase DavT K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D ROLI_003660 ald_2; (GenBank) 3-succinoylsemialdehyde-pyridine dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D ROLI_003940 betB_1; (GenBank) NAD/NADP-dependent betaine aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D ROLI_010250 puuC_1; (GenBank) NADP/NAD-dependent aldehyde dehydrogenase PuuC K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D ROLI_035770 preT; (GenBank) NAD-dependent dihydropyrimidine dehydrogenase subunit PreT K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1] D ROLI_035760 preA; (GenBank) NAD-dependent dihydropyrimidine dehydrogenase subunit PreA K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1] D ROLI_035710 dht; (GenBank) D-hydantoinase/dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D ROLI_035730 hyuC; (GenBank) N-carbamoyl-L-amino-acid hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] D ROLI_032520 fadJ_2; (GenBank) Fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D ROLI_024230 bauC; (GenBank) Putative 3-oxopropanoate dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] C 00430 Taurine and hypotaurine metabolism [PATH:rfu00430] D ROLI_003420 ywrD_1; (GenBank) Glutathione hydrolase-like YwrD proenzyme K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D ROLI_032940 ggt; (GenBank) Glutathione hydrolase proenzyme K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D ROLI_035000 ywrD_2; (GenBank) Glutathione hydrolase-like YwrD proenzyme K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D ROLI_002810 hpa_tpa; (GenBank) Hypotaurine/taurine--pyruvate aminotransferase K03851 tpa; taurine-pyruvate aminotransferase [EC:2.6.1.77] D ROLI_003230 ald_1; (GenBank) Alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D ROLI_040020 hypothetical protein K07255 tauX; taurine dehydrogenase small subunit [EC:1.4.2.-] D ROLI_040010 puuB_3; (GenBank) Gamma-glutamylputrescine oxidoreductase K07256 tauY; taurine dehydrogenase large subunit [EC:1.4.2.-] D ROLI_039390 xsc_1; (GenBank) Sulfoacetaldehyde acetyltransferase K03852 xsc; sulfoacetaldehyde acetyltransferase [EC:2.3.3.15] D ROLI_040000 xsc_2; (GenBank) Sulfoacetaldehyde acetyltransferase K03852 xsc; sulfoacetaldehyde acetyltransferase [EC:2.3.3.15] D ROLI_039400 pta; (GenBank) Phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D ROLI_009610 sauT_1; (GenBank) putative sulfoacetate--CoA ligase K26005 sauT; sulfoacetate-CoA ligase [EC:6.2.1.-] D ROLI_009600 sauS; (GenBank) Sulfoacetaldehyde dehydrogenase (acylating) K15515 sauS; sulfoacetaldehyde dehydrogenase [EC:1.2.1.81] C 00440 Phosphonate and phosphinate metabolism [PATH:rfu00440] D ROLI_020900 phnI; (GenBank) Alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI K06164 phnI; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI [EC:2.7.8.37] D ROLI_020880 phnG; (GenBank) Alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnG K06166 phnG; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnG [EC:2.7.8.37] D ROLI_020890 phnH; (GenBank) Alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnH K06165 phnH; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnH [EC:2.7.8.37] D ROLI_020930 phnL; (GenBank) Alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnL K05780 phnL; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnL [EC:2.7.8.37] D ROLI_007310 phnM_1; (GenBank) Alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase K06162 phnM; alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase [EC:3.6.1.63] D ROLI_020960 phnM_2; (GenBank) Alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase K06162 phnM; alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase [EC:3.6.1.63] D ROLI_034860 phnM_3; (GenBank) Alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase K06162 phnM; alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase [EC:3.6.1.63] D ROLI_020910 phnJ; (GenBank) Alpha-D-ribose 1-methylphosphonate 5-phosphate C-P lyase K06163 phnJ; alpha-D-ribose 1-methylphosphonate 5-phosphate C-P lyase [EC:4.7.1.1] D ROLI_010270 hypothetical protein K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55] C 00450 Selenocompound metabolism [PATH:rfu00450] D ROLI_020670 mgl; (GenBank) L-methionine gamma-lyase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D ROLI_004440 patB; (GenBank) Cystathionine beta-lyase PatB K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D ROLI_022060 hypothetical protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D ROLI_023900 metH_1; (GenBank) Methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D ROLI_032220 hypothetical protein K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D ROLI_021020 sufS; (GenBank) Cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D ROLI_028240 csd_2; (GenBank) putative cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D ROLI_007390 trxB; (GenBank) Thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D ROLI_026440 Ferredoxin--NADP reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D ROLI_046150 sat_cysC; (GenBank) putative bifunctional SAT/APS kinase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] D ROLI_014820 metG; (GenBank) Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:rfu00460] D ROLI_028500 bglA; (GenBank) Beta-glucosidase A K05350 bglB; beta-glucosidase [EC:3.2.1.21] D ROLI_003420 ywrD_1; (GenBank) Glutathione hydrolase-like YwrD proenzyme K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D ROLI_032940 ggt; (GenBank) Glutathione hydrolase proenzyme K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D ROLI_035000 ywrD_2; (GenBank) Glutathione hydrolase-like YwrD proenzyme K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D ROLI_001130 glyA2_1; (GenBank) Serine hydroxymethyltransferase 2 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D ROLI_032670 glyA2_2; (GenBank) Serine hydroxymethyltransferase 2 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D ROLI_031310 fmdA; (GenBank) Formamidase K01455 E3.5.1.49; formamidase [EC:3.5.1.49] C 00470 D-Amino acid metabolism [PATH:rfu00470] D ROLI_012800 alr; (GenBank) Alanine racemase, biosynthetic K01775 alr; alanine racemase [EC:5.1.1.1] D ROLI_003050 dat; (GenBank) D-alanine aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21] D ROLI_011530 ddlB; (GenBank) D-alanine--D-alanine ligase B K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D ROLI_029810 bar; (GenBank) Broad specificity amino-acid racemase K25317 alr; amino-acid racemase [EC:5.1.1.10] D ROLI_023860 purQ; (GenBank) Phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D ROLI_018360 murI; (GenBank) Glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D ROLI_011460 murD; (GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D ROLI_003030 hypothetical protein K26272 dgcN; D-glutamate N-acetyltransferase [EC:2.3.1.312] D ROLI_003040 ycjG; (GenBank) L-Ala-D/L-Glu epimerase K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25] D ROLI_027710 Aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] D ROLI_005660 dapF; (GenBank) Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D ROLI_007670 lysA; (GenBank) Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D ROLI_031180 dauA; (GenBank) FAD-dependent catabolic D-arginine dehydrogenase DauA K19746 dauA; D-arginine dehydrogenase [EC:1.4.99.6] C 00480 Glutathione metabolism [PATH:rfu00480] D ROLI_003420 ywrD_1; (GenBank) Glutathione hydrolase-like YwrD proenzyme K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D ROLI_032940 ggt; (GenBank) Glutathione hydrolase proenzyme K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D ROLI_035000 ywrD_2; (GenBank) Glutathione hydrolase-like YwrD proenzyme K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D ROLI_035580 chaC; (GenBank) Glutathione-specific gamma-glutamylcyclotransferase K07232 CHAC; glutathione-specific gamma-glutamylcyclotransferase [EC:4.3.2.7] D ROLI_038460 pxpA; (GenBank) 5-oxoprolinase subunit A K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9] D ROLI_038480 pxpB; (GenBank) 5-oxoprolinase subunit B K23123 pxpB; 5-oxoprolinase (ATP-hydrolysing) subunit B [EC:3.5.2.9] D ROLI_034660 egtA; (GenBank) Glutamate--cysteine ligase EgtA K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D ROLI_036160 gshB_2; (GenBank) Glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3] D ROLI_019510 pepA_1; (GenBank) Cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D ROLI_039750 pepA_2; (GenBank) putative cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D ROLI_011720 pepN; (GenBank) Aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D ROLI_004290 gstB; (GenBank) Glutathione S-transferase GST-6.0 K00799 GST; glutathione S-transferase [EC:2.5.1.18] D ROLI_005190 fzlA; (GenBank) FtsZ-localized protein A K00799 GST; glutathione S-transferase [EC:2.5.1.18] D ROLI_008290 gst; (GenBank) Glutathione S-transferase GST-4.5 K00799 GST; glutathione S-transferase [EC:2.5.1.18] D ROLI_010000 yfcG_3; (GenBank) Disulfide-bond oxidoreductase YfcG K00799 GST; glutathione S-transferase [EC:2.5.1.18] D ROLI_012020 hypothetical protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D ROLI_032480 yfcG_4; (GenBank) Disulfide-bond oxidoreductase YfcG K00799 GST; glutathione S-transferase [EC:2.5.1.18] D ROLI_036140 hypothetical protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D ROLI_037500 hypothetical protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D ROLI_008310 garB_1; (GenBank) Glutathione amide reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7] D ROLI_047610 garB_2; (GenBank) Glutathione amide reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7] D ROLI_021150 icd_1; (GenBank) Isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D ROLI_035150 icd_2; (GenBank) Isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D ROLI_021350 zwf; (GenBank) Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D ROLI_005240 gpx1; (GenBank) Hydroperoxy fatty acid reductase gpx1 K00432 gpx; glutathione peroxidase [EC:1.11.1.9] D ROLI_001910 Peroxiredoxin K24138 prx3; glutaredoxin/glutathione-dependent peroxiredoxin [EC:1.11.1.25 1.11.1.27] D ROLI_037270 ldc; (GenBank) Lysine/ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] B B 09107 Glycan biosynthesis and metabolism C 00520 Amino sugar and nucleotide sugar metabolism [PATH:rfu00520] D ROLI_019180 anmK; (GenBank) Anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170] D ROLI_044100 amgK; (GenBank) N-acetylmuramate/N-acetylglucosamine kinase K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221] D ROLI_044090 murU; (GenBank) N-acetylmuramate alpha-1-phosphate uridylyltransferase K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99] D ROLI_010100 murQ; (GenBank) N-acetylmuramic acid 6-phosphate etherase K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126] D ROLI_011960 glmU; (GenBank) Bifunctional protein GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D ROLI_006100 murA; (GenBank) UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D ROLI_011520 murB; (GenBank) UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D ROLI_019010 nagZ; (GenBank) Beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D ROLI_010060 agaAII; (GenBank) N-acetylgalactosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25] D ROLI_010090 gspK; (GenBank) Glucosamine kinase GspK K18676 gspK; glucosamine kinase [EC:2.7.1.8] D ROLI_008630 glmM_1; (GenBank) Phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D ROLI_010070 glmS; (GenBank) Glutamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D ROLI_011950 nodM; (GenBank) Glutamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D ROLI_017200 scrK; (GenBank) Fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D ROLI_021330 pgi; (GenBank) Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D ROLI_046210 algA; (GenBank) Alginate biosynthesis protein AlgA K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D ROLI_046170 galE1; (GenBank) UDP-glucose 4-epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D ROLI_017360 glk; (GenBank) Glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D ROLI_017270 pgm; (GenBank) Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D ROLI_043360 gtaB; (GenBank) UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D ROLI_045260 ugd; (GenBank) UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D ROLI_043350 galE; (GenBank) UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D ROLI_004950 hypothetical protein K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D ROLI_045900 glmM_2; (GenBank) Phosphoglucosamine mutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D ROLI_017230 glgC; (GenBank) Glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D ROLI_045910 rfbA; (GenBank) Glucose-1-phosphate thymidylyltransferase 1 K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] C 00541 Biosynthesis of various nucleotide sugars [PATH:rfu00541] D ROLI_011960 glmU; (GenBank) Bifunctional protein GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D ROLI_046190 wbpA; (GenBank) UDP-N-acetyl-D-glucosamine 6-dehydrogenase K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136] D ROLI_043250 kdsD; (GenBank) Arabinose 5-phosphate isomerase KdsD K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D ROLI_030720 kdsA; (GenBank) 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D ROLI_043370 kdsB; (GenBank) 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D ROLI_043360 gtaB; (GenBank) UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D ROLI_045260 ugd; (GenBank) UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D ROLI_045910 rfbA; (GenBank) Glucose-1-phosphate thymidylyltransferase 1 K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D ROLI_045930 rffG; (GenBank) dTDP-glucose 4,6-dehydratase 2 K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D ROLI_045940 rfbC; (GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D ROLI_045920 rfbD; (GenBank) dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D ROLI_046210 algA; (GenBank) Alginate biosynthesis protein AlgA K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation C 00540 Lipopolysaccharide biosynthesis [PATH:rfu00540] D ROLI_023340 lpxA; (GenBank) Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D ROLI_011570 lpxC; (GenBank) UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D ROLI_020480 lpxD; (GenBank) UDP-3-O-acylglucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D ROLI_023330 lpxI; (GenBank) UDP-2,3-diacylglucosamine pyrophosphatase LpxI K09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D ROLI_023320 lpxB; (GenBank) Lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D ROLI_037620 lpxK; (GenBank) Tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D ROLI_011920 waaA; (GenBank) 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D ROLI_037610 hypothetical protein K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D ROLI_003110 lpxL; (GenBank) Lipid A biosynthesis lauroyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] C 00542 O-Antigen repeat unit biosynthesis C 00550 Peptidoglycan biosynthesis [PATH:rfu00550] D ROLI_006100 murA; (GenBank) UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D ROLI_011520 murB; (GenBank) UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D ROLI_011500 murC; (GenBank) UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D ROLI_011460 murD; (GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D ROLI_011430 murE; (GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D ROLI_011530 ddlB; (GenBank) D-alanine--D-alanine ligase B K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D ROLI_011440 murF; (GenBank) UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D ROLI_023420 ispU; (GenBank) Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D ROLI_005130 uppP; (GenBank) Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D ROLI_011450 mraY; (GenBank) Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D ROLI_011490 murG_1; (GenBank) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D ROLI_005180 mtgA_2; (GenBank) Biosynthetic peptidoglycan transglycosylase K03814 mtgA; peptidoglycan glycosyltransferase [EC:2.4.99.28] D ROLI_022740 mrcA; (GenBank) Penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D ROLI_011480 ftsW; (GenBank) putative peptidoglycan glycosyltransferase FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28] D ROLI_036040 mrdB; (GenBank) Peptidoglycan glycosyltransferase MrdB K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28] D ROLI_036030 mrdA; (GenBank) Peptidoglycan D,D-transpeptidase MrdA K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D ROLI_011420 ftsI; (GenBank) putative peptidoglycan D,D-transpeptidase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D ROLI_010310 dacC; (GenBank) D-alanyl-D-alanine carboxypeptidase DacC K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D ROLI_034510 hypothetical protein K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] C 00552 Teichoic acid biosynthesis [PATH:rfu00552] D ROLI_005130 uppP; (GenBank) Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:rfu00543] D ROLI_028530 cysE; (GenBank) Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:rfu00730] D ROLI_021100 nifS; (GenBank) Cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D ROLI_047170 iscS; (GenBank) Cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D ROLI_039480 mnmC_2; (GenBank) tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC K03153 thiO; glycine oxidase [EC:1.4.3.19] D ROLI_005390 dxs_1; (GenBank) 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D ROLI_040820 dxs_4; (GenBank) 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D ROLI_021430 thiE; (GenBank) Thiamine-phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D ROLI_008260 hypothetical protein K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2] D ROLI_034080 adk; (GenBank) Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:rfu00740] D ROLI_037410 ribA; (GenBank) GTP cyclohydrolase-2 K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D ROLI_024780 ribBA; (GenBank) Riboflavin biosynthesis protein RibBA K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D ROLI_024810 ribD; (GenBank) Riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D ROLI_005540 ribH2; (GenBank) 6,7-dimethyl-8-ribityllumazine synthase 2 K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D ROLI_024770 ribH1; (GenBank) 6,7-dimethyl-8-ribityllumazine synthase 1 K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D ROLI_024790 ribE; (GenBank) Riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9] D ROLI_007190 ribF; (GenBank) Bifunctional riboflavin kinase/FMN adenylyltransferase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D ROLI_027430 putative flavin reductase K23462 tgnA; flavin-dependent trigonelline monooxygenase, reductase component [EC:1.5.1.36] D ROLI_016420 nfrA2; (GenBank) FMN reductase [NAD(P)H] K19286 nfrA2; FMN reductase [NAD(P)H] [EC:1.5.1.39] C 00750 Vitamin B6 metabolism [PATH:rfu00750] D ROLI_018620 pdxH; (GenBank) Pyridoxine/pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5] D ROLI_044980 serC; (GenBank) Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D ROLI_019460 pdxA; (GenBank) 4-hydroxythreonine-4-phosphate dehydrogenase K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262] D ROLI_004760 pdxJ; (GenBank) Pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2] D ROLI_025840 thrC; (GenBank) Threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] C 00760 Nicotinate and nicotinamide metabolism [PATH:rfu00760] D ROLI_015610 nadX; (GenBank) L-aspartate dehydrogenase K06989 nadX; aspartate dehydrogenase [EC:1.4.1.21] D ROLI_038860 pncB; (GenBank) Nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D ROLI_006670 deoD; (GenBank) Purine nucleoside phosphorylase DeoD-type K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1] D ROLI_032380 yfkN_1; (GenBank) Trifunctional nucleotide phosphoesterase protein YfkN K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D ROLI_012700 surE; (GenBank) 5'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D ROLI_034520 nadD; (GenBank) nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D ROLI_019360 mazG; (GenBank) Nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D ROLI_037200 nudC; (GenBank) NADH pyrophosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22] D ROLI_035910 nadE; (GenBank) Glutamine-dependent NAD(+) synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5] D ROLI_021770 pncC; (GenBank) Nicotinamide-nucleotide amidohydrolase PncC K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42] D ROLI_038870 pncA; (GenBank) Nicotinamidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-] D ROLI_030500 cobB_2; (GenBank) NAD-dependent protein deacylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313] D ROLI_032660 nadK; (GenBank) NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] D ROLI_011810 pntA; (GenBank) NAD(P) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D ROLI_011820 pntB; (GenBank) NAD(P) transhydrogenase subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1] D ROLI_016140 maiA; (GenBank) Maleate isomerase K01799 nicE; maleate isomerase [EC:5.2.1.1] D ROLI_001680 davD; (GenBank) Glutarate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D ROLI_047430 gabD1; (GenBank) Succinate-semialdehyde dehydrogenase [NADP(+)] 1 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00770 Pantothenate and CoA biosynthesis [PATH:rfu00770] D ROLI_022640 ilvI; (GenBank) Acetolactate synthase isozyme 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D ROLI_029640 alsS_1; (GenBank) Acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D ROLI_030600 alsS_2; (GenBank) Acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D ROLI_022660 ilvH; (GenBank) Acetolactate synthase isozyme 3 small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D ROLI_008660 ilvC; (GenBank) Ketol-acid reductoisomerase (NADP(+)) K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D ROLI_039920 ilvD; (GenBank) Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D ROLI_010440 hypothetical protein K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D ROLI_012510 coaX; (GenBank) Type III pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33] D ROLI_036090 coaBC; (GenBank) Coenzyme A biosynthesis bifunctional protein CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D ROLI_019360 mazG; (GenBank) Nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D ROLI_024200 coaD; (GenBank) Phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D ROLI_043950 coaE; (GenBank) Dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D ROLI_004780 acpS; (GenBank) Holo-[acyl-carrier-protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D ROLI_005440 ilvE_1; (GenBank) Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D ROLI_015260 ilvE_2; (GenBank) Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D ROLI_030800 ilvE_3; (GenBank) Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D ROLI_035770 preT; (GenBank) NAD-dependent dihydropyrimidine dehydrogenase subunit PreT K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1] D ROLI_035760 preA; (GenBank) NAD-dependent dihydropyrimidine dehydrogenase subunit PreA K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1] D ROLI_035710 dht; (GenBank) D-hydantoinase/dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D ROLI_035730 hyuC; (GenBank) N-carbamoyl-L-amino-acid hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] D ROLI_003660 ald_2; (GenBank) 3-succinoylsemialdehyde-pyridine dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D ROLI_003940 betB_1; (GenBank) NAD/NADP-dependent betaine aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D ROLI_010250 puuC_1; (GenBank) NADP/NAD-dependent aldehyde dehydrogenase PuuC K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00780 Biotin metabolism [PATH:rfu00780] D ROLI_032090 fabB; (GenBank) 3-oxoacyl-[acyl-carrier-protein] synthase 1 K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D ROLI_028740 fabF_2; (GenBank) 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D ROLI_012550 fabG_2; (GenBank) 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D ROLI_028770 fabG_3; (GenBank) 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D ROLI_040790 tsaC1; (GenBank) 4-formylbenzenesulfonate dehydrogenase TsaC1/TsaC2 K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D ROLI_023350 fabZ; (GenBank) 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D ROLI_018610 fabI_1; (GenBank) Enoyl-[acyl-carrier-protein] reductase [NADH] FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D ROLI_032100 fabI_2; (GenBank) Enoyl-[acyl-carrier-protein] reductase [NADH] FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D ROLI_012500 birA; (GenBank) Bifunctional ligase/repressor BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D ROLI_027020 dmsA_1; (GenBank) Dimethyl sulfoxide/trimethylamine N-oxide reductase K08351 bisC; biotin/methionine sulfoxide reductase [EC:1.-.-.-] C 00785 Lipoic acid metabolism [PATH:rfu00785] D ROLI_008820 lipB; (GenBank) Octanoyltransferase K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181] D ROLI_021840 lipA; (GenBank) Lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8] D ROLI_007740 lpd3; (GenBank) Dihydrolipoyl dehydrogenase 3 K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D ROLI_024290 lpd; (GenBank) Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D ROLI_026850 lpdA; (GenBank) Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D ROLI_026870 aceE_1; (GenBank) Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D ROLI_042560 aceE_2; (GenBank) Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D ROLI_010950 acoA; (GenBank) Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D ROLI_010940 dxs_2; (GenBank) 1-deoxy-D-xylulose-5-phosphate synthase K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D ROLI_010930 pdhC; (GenBank) Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D ROLI_026860 aceF; (GenBank) Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D ROLI_007800 sucA; (GenBank) 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D ROLI_007790 sucB; (GenBank) Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D ROLI_032340 dxs_3; (GenBank) 1-deoxy-D-xylulose-5-phosphate synthase K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4] D ROLI_035820 gcvP; (GenBank) Glycine dehydrogenase (decarboxylating) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D ROLI_035840 gcvT_1; (GenBank) Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D ROLI_041690 gcvT_2; (GenBank) Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D ROLI_041800 gcvT_3; (GenBank) Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D ROLI_035830 gcvH; (GenBank) Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:rfu00790] D ROLI_008510 folE2; (GenBank) GTP cyclohydrolase FolE2 K09007 folE2; GTP cyclohydrolase IB [EC:3.5.4.16] D ROLI_008610 hypothetical protein K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D ROLI_029950 hypothetical protein K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D ROLI_004720 hypothetical protein K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D ROLI_008620 hypothetical protein K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D ROLI_039880 folC; (GenBank) Dihydrofolate synthase/folylpolyglutamate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D ROLI_037410 ribA; (GenBank) GTP cyclohydrolase-2 K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D ROLI_024780 ribBA; (GenBank) Riboflavin biosynthesis protein RibBA K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D ROLI_040150 hypothetical protein K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38] D ROLI_001890 phhB; (GenBank) Putative pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D ROLI_011930 moaA; (GenBank) GTP 3',8-cyclase K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D ROLI_018490 moaC; (GenBank) Cyclic pyranopterin monophosphate synthase K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D ROLI_034730 moaE; (GenBank) Molybdopterin synthase catalytic subunit K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D ROLI_031070 moaB; (GenBank) Molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75] D ROLI_018480 moeA; (GenBank) Molybdopterin molybdenumtransferase K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D ROLI_030920 hypothetical protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D ROLI_042290 hypothetical protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D ROLI_030940 mobA_2; (GenBank) Molybdenum cofactor guanylyltransferase K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77] D ROLI_019770 C 00670 One carbon pool by folate [PATH:rfu00670] D ROLI_026150 fhs; (GenBank) Formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3] D ROLI_026130 folD; (GenBank) Bifunctional protein FolD protein K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D ROLI_001130 glyA2_1; (GenBank) Serine hydroxymethyltransferase 2 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D ROLI_032670 glyA2_2; (GenBank) Serine hydroxymethyltransferase 2 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D ROLI_023990 purN; (GenBank) Phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D ROLI_003890 purH; (GenBank) Bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D ROLI_035840 gcvT_1; (GenBank) Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D ROLI_041690 gcvT_2; (GenBank) Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D ROLI_041800 gcvT_3; (GenBank) Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D ROLI_022060 hypothetical protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D ROLI_023900 metH_1; (GenBank) Methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D ROLI_006250 thyX; (GenBank) Flavin-dependent thymidylate synthase K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] D ROLI_022050 hypothetical protein K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D ROLI_025230 metF; (GenBank) 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D ROLI_009350 hypothetical protein K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] D ROLI_032010 metK; (GenBank) S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D ROLI_044180 ahcY; (GenBank) Adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D ROLI_003500 abo_1; (GenBank) 4-methylaminobutanoate oxidase (formaldehyde-forming) K00315 DMGDH; dimethylglycine dehydrogenase [EC:1.5.8.4] D ROLI_003540 dmg; (GenBank) Dimethylglycine oxidase K00315 DMGDH; dimethylglycine dehydrogenase [EC:1.5.8.4] D ROLI_022160 abo_3; (GenBank) 4-methylaminobutanoate oxidase (formaldehyde-forming) K00315 DMGDH; dimethylglycine dehydrogenase [EC:1.5.8.4] D ROLI_023610 abo_4; (GenBank) 4-methylaminobutanoate oxidase (formaldehyde-forming) K00315 DMGDH; dimethylglycine dehydrogenase [EC:1.5.8.4] D ROLI_031200 abo_6; (GenBank) 4-methylaminobutanoate oxidase (formaldehyde-forming) K00315 DMGDH; dimethylglycine dehydrogenase [EC:1.5.8.4] D ROLI_035820 gcvP; (GenBank) Glycine dehydrogenase (decarboxylating) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D ROLI_007740 lpd3; (GenBank) Dihydrolipoyl dehydrogenase 3 K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D ROLI_024290 lpd; (GenBank) Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D ROLI_026850 lpdA; (GenBank) Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D ROLI_035830 gcvH; (GenBank) Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D ROLI_029280 betA; (GenBank) Oxygen-dependent choline dehydrogenase K00108 betA; choline dehydrogenase [EC:1.1.99.1] D ROLI_029290 betB_2; (GenBank) NAD/NADP-dependent betaine aldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:rfu00860] D ROLI_001970 hemA_1; (GenBank) 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37] D ROLI_002600 hemA_2; (GenBank) 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37] D ROLI_022810 hemA_3; (GenBank) 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37] D ROLI_018450 gltX_1; (GenBank) Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D ROLI_035870 gltX1; (GenBank) Glutamate--tRNA ligase 1 K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D ROLI_021580 hemB; (GenBank) Delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D ROLI_036950 hemC; (GenBank) Porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D ROLI_044250 hypothetical protein K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75] D ROLI_036940 hemE; (GenBank) Uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] D ROLI_036960 hemF; (GenBank) Oxygen-dependent coproporphyrinogen-III oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3] D ROLI_037120 hemN_1; (GenBank) Oxygen-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3] D ROLI_039350 hemN_2; (GenBank) Oxygen-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3] D ROLI_035060 hemG; (GenBank) Protoporphyrinogen IX dehydrogenase [menaquinone] K00230 hemG; menaquinone-dependent protoporphyrinogen oxidase [EC:1.3.5.3] D ROLI_043920 hypothetical protein K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-] D ROLI_043600 hemH; (GenBank) Ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] D ROLI_019880 cysG_2; (GenBank) Siroheme synthase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4] D ROLI_002070 cysG_1; (GenBank) Siroheme synthase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107] D ROLI_011170 sumT; (GenBank) Uroporphyrinogen-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107] D ROLI_002020 hypothetical protein K22225 ahbAB; siroheme decarboxylase [EC:4.1.1.111] D ROLI_002030 hypothetical protein K22225 ahbAB; siroheme decarboxylase [EC:4.1.1.111] D ROLI_002040 hypothetical protein K22225 ahbAB; siroheme decarboxylase [EC:4.1.1.111] D ROLI_002000 nirS_1; (GenBank) Nitrite reductase K24867 nirN; dihydro-heme d1 dehydrogenase D ROLI_025890 ctaB; (GenBank) Protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D ROLI_021410 ctaA; (GenBank) Heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9] D ROLI_011100 cobI; (GenBank) Precorrin-2 C(20)-methyltransferase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151] D ROLI_011080 hypothetical protein K02229 cobG; precorrin-3B synthase [EC:1.14.13.83] D ROLI_011110 cobJ; (GenBank) Precorrin-3B C(17)-methyltransferase K05934 cobJ; precorrin-3B C17-methyltransferase / cobalt-factor III methyltransferase [EC:2.1.1.131 2.1.1.272] D ROLI_011150 cobM; (GenBank) Precorrin-4 C(11)-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271] D ROLI_011140 hypothetical protein K02189 cbiG; cobalt-precorrin 5A hydrolase [EC:3.7.1.12] D ROLI_011190 hypothetical protein K02228 cobF; precorrin-6A synthase [EC:2.1.1.152] D ROLI_011120 cobK_1; (GenBank) Precorrin-6A reductase K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106] D ROLI_018810 cobK_2; (GenBank) Precorrin-6A reductase K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106] D ROLI_011130 cobL; (GenBank) Precorrin-6Y C(5,15)-methyltransferase [decarboxylating] K00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase / cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196] D ROLI_011090 cobH; (GenBank) Precorrin-8X methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60] D ROLI_011160 cobB_1; (GenBank) Hydrogenobyrinate a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11] D ROLI_011070 hypothetical protein K02230 cobN; cobaltochelatase CobN [EC:6.6.1.2] D ROLI_011640 cobS; (GenBank) Aerobic cobaltochelatase subunit CobS K09882 cobS; cobaltochelatase CobS [EC:6.6.1.2] D ROLI_011630 cobT; (GenBank) Aerobic cobaltochelatase subunit CobT K09883 cobT; cobaltochelatase CobT [EC:6.6.1.2] D ROLI_005020 Corrinoid adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D ROLI_005460 cobO; (GenBank) Corrinoid adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D ROLI_025370 cobQ; (GenBank) Cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10] D ROLI_004390 cobD_1; (GenBank) Cobalamin biosynthesis protein CobD K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10] D ROLI_004400 cobD_2; (GenBank) Threonine-phosphate decarboxylase K02225 cobC1; cobalamin biosynthesis protein CobC D ROLI_036120 cobP; (GenBank) Bifunctional adenosylcobalamin biosynthesis protein CobP K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62] D ROLI_024530 cobV; (GenBank) Adenosylcobinamide-GDP ribazoletransferase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26] D ROLI_024520 cobU; (GenBank) Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21] D ROLI_002500 hypothetical protein K03403 chlH; magnesium chelatase subunit H [EC:6.6.1.1] D ROLI_002640 bchD; (GenBank) Magnesium-chelatase 60 kDa subunit K03404 chlD; magnesium chelatase subunit D [EC:6.6.1.1] D ROLI_002650 bchI; (GenBank) Magnesium-chelatase 38 kDa subunit K03405 chlI; magnesium chelatase subunit I [EC:6.6.1.1] D ROLI_002520 bchM; (GenBank) Magnesium-protoporphyrin O-methyltransferase K03428 bchM; magnesium-protoporphyrin O-methyltransferase [EC:2.1.1.11] D ROLI_039370 bchE; (GenBank) Anaerobic magnesium-protoporphyrin IX monomethyl ester cyclase K04034 bchE; anaerobic magnesium-protoporphyrin IX monomethyl ester cyclase [EC:1.21.98.3] D ROLI_002580 hypothetical protein K04035 E1.14.13.81; magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase [EC:1.14.13.81] D ROLI_039360 hypothetical protein K04036 bchJ; divinyl protochlorophyllide a 8-vinyl-reductase [EC:1.-.-.-] D ROLI_002510 bchL; (GenBank) Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein K04037 chlL; light-independent protochlorophyllide reductase subunit L [EC:1.3.7.7] D ROLI_002480 bchN; (GenBank) Light-independent protochlorophyllide reductase subunit N K04038 chlN; light-independent protochlorophyllide reductase subunit N [EC:1.3.7.7] D ROLI_002490 bchB; (GenBank) Light-independent protochlorophyllide reductase subunit B K04039 chlB; light-independent protochlorophyllide reductase subunit B [EC:1.3.7.7] D ROLI_002440 menA; (GenBank) 1,4-dihydroxy-2-naphthoate octaprenyltransferase K04040 chlG; chlorophyll/bacteriochlorophyll a synthase [EC:2.5.1.62 2.5.1.133] D ROLI_040940 bchX; (GenBank) Chlorophyllide reductase 35.5 kDa chain K11333 bchX; 3,8-divinyl chlorophyllide a/chlorophyllide a reductase subunit X [EC:1.3.7.14 1.3.7.15] D ROLI_040910 bchY; (GenBank) Chlorophyllide reductase 52.5 kDa chain K11334 bchY; 3,8-divinyl chlorophyllide a/chlorophyllide a reductase subunit Y [EC:1.3.7.14 1.3.7.15] D ROLI_040890 bchZ; (GenBank) Chlorophyllide reductase subunit Z K11335 bchZ; 3,8-divinyl chlorophyllide a/chlorophyllide a reductase subunit Z [EC:1.3.7.14 1.3.7.15] D ROLI_002470 hypothetical protein K11336 bchF; 3-vinyl bacteriochlorophyllide hydratase [EC:4.2.1.165] D ROLI_040950 lgoD; (GenBank) L-galactonate-5-dehydrogenase K11337 bchC; bacteriochlorophyllide a dehydrogenase [EC:1.1.1.396] D ROLI_002420 kmo; (GenBank) Kynurenine 3-monooxygenase K10960 chlP; geranylgeranyl diphosphate/geranylgeranyl-bacteriochlorophyllide a reductase [EC:1.3.1.83 1.3.1.111] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:rfu00130] D ROLI_044300 1,4-dihydroxy-2-naphthoyl-CoA hydrolase K01075 E3.1.2.23; 4-hydroxybenzoyl-CoA thioesterase [EC:3.1.2.23] D ROLI_034690 ubiA; (GenBank) 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D ROLI_043540 ubiG; (GenBank) Ubiquinone biosynthesis O-methyltransferase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64] D ROLI_008700 ubiL_1; (GenBank) Ubiquinone hydroxylase UbiL K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-] D ROLI_037350 ubiL_2; (GenBank) Ubiquinone hydroxylase UbiL K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-] D ROLI_045060 ubiE; (GenBank) Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D ROLI_016980 B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:rfu00900] D ROLI_005390 dxs_1; (GenBank) 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D ROLI_040820 dxs_4; (GenBank) 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D ROLI_023400 dxr; (GenBank) 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D ROLI_021740 ispD; (GenBank) 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] D ROLI_006900 ispE; (GenBank) 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D ROLI_022790 ispG; (GenBank) 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D ROLI_004700 ispH; (GenBank) 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D ROLI_003450 thlA; (GenBank) Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ROLI_006990 phaA_1; (GenBank) Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ROLI_026880 phaA_2; (GenBank) Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ROLI_032500 fadA; (GenBank) Putative acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ROLI_045040 bktB; (GenBank) Beta-ketothiolase BktB K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ROLI_002410 idi; (GenBank) Isopentenyl-diphosphate Delta-isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2] D ROLI_005400 ispA; (GenBank) Farnesyl diphosphate synthase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] D ROLI_040970 Farnesyl diphosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D ROLI_006910 ispB; (GenBank) Octaprenyl diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D ROLI_023420 ispU; (GenBank) Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D ROLI_002420 kmo; (GenBank) Kynurenine 3-monooxygenase K10960 chlP; geranylgeranyl diphosphate/geranylgeranyl-bacteriochlorophyllide a reductase [EC:1.3.1.83 1.3.1.111] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis [PATH:rfu00906] D ROLI_002680 hypothetical protein K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32] D ROLI_002670 crtI; (GenBank) Phytoene desaturase (neurosporene-forming) K10027 crtI; phytoene desaturase [EC:1.3.99.26 1.3.99.28 1.3.99.29 1.3.99.31] D ROLI_040990 crtC; (GenBank) Acyclic carotenoid 1,2-hydratase K09844 crtC; carotenoid 1,2-hydratase [EC:4.2.1.131] D ROLI_040980 crtD; (GenBank) Hydroxyneurosporene desaturase K09845 crtD; 1-hydroxycarotenoid 3,4-desaturase [EC:1.3.99.27] D ROLI_040960 crtF; (GenBank) Demethylspheroidene O-methyltransferase K09846 crtF; demethylspheroidene O-methyltransferase [EC:2.1.1.210] D ROLI_002660 crtA; (GenBank) Spheroidene monooxygenase K09847 crtA; spheroidene monooxygenase [EC:1.14.15.9] C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation [PATH:rfu00903] D ROLI_003660 ald_2; (GenBank) 3-succinoylsemialdehyde-pyridine dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D ROLI_003940 betB_1; (GenBank) NAD/NADP-dependent betaine aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D ROLI_010250 puuC_1; (GenBank) NADP/NAD-dependent aldehyde dehydrogenase PuuC K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D ROLI_011030 limB; (GenBank) Limonene 1,2-monooxygenase K14733 limB; limonene 1,2-monooxygenase [EC:1.14.13.107] C 00907 Pinene, camphor and geraniol degradation [PATH:rfu00907] D ROLI_032520 fadJ_2; (GenBank) Fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D ROLI_012030 liuE; (GenBank) 3-hydroxy-3-isohexenylglutaryl-CoA/hydroxy-methylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D ROLI_019700 tktA; (GenBank) Transketolase 1 K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics D ROLI_017290 hypothetical protein K21162 sgcE4; enediyne biosynthesis protein E4 C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis [PATH:rfu00523] D ROLI_045910 rfbA; (GenBank) Glucose-1-phosphate thymidylyltransferase 1 K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D ROLI_045930 rffG; (GenBank) dTDP-glucose 4,6-dehydratase 2 K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D ROLI_045940 rfbC; (GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D ROLI_045920 rfbD; (GenBank) dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 01054 Nonribosomal peptide structures [PATH:rfu01054] D ROLI_027710 Aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] C 01053 Biosynthesis of siderophore group nonribosomal peptides D ROLI_013510 hypothetical protein K04782 pchB; isochorismate pyruvate lyase [EC:4.2.99.21] D ROLI_027480 pchB; (GenBank) Isochorismate pyruvate lyase K04782 pchB; isochorismate pyruvate lyase [EC:4.2.99.21] C 01055 Biosynthesis of vancomycin group antibiotics D ROLI_045930 rffG; (GenBank) dTDP-glucose 4,6-dehydratase 2 K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids [PATH:rfu00946] D ROLI_028500 bglA; (GenBank) Beta-glucosidase A K05350 bglB; beta-glucosidase [EC:3.2.1.21] C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis D ROLI_021610 quiP; (GenBank) Acyl-homoserine lactone acylase QuiP K01434 pac; penicillin G amidase [EC:3.5.1.11] C 00332 Carbapenem biosynthesis [PATH:rfu00332] D ROLI_020360 proB; (GenBank) Glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D ROLI_020370 proA; (GenBank) Gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00261 Monobactam biosynthesis [PATH:rfu00261] D ROLI_046150 sat_cysC; (GenBank) putative bifunctional SAT/APS kinase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] D ROLI_025670 lysC; (GenBank) Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D ROLI_039670 asd2; (GenBank) Aspartate-semialdehyde dehydrogenase 2 K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D ROLI_015330 dapA_1; (GenBank) 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D ROLI_015350 dapA_2; (GenBank) 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D ROLI_039440 dapA_3; (GenBank) 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D ROLI_003840 dapB; (GenBank) 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:rfu00521] D ROLI_017360 glk; (GenBank) Glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D ROLI_017270 pgm; (GenBank) Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D ROLI_014710 suhB_1; (GenBank) Inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D ROLI_037590 suhB_3; (GenBank) Inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D ROLI_010790 iolG_1; (GenBank) Inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369] D ROLI_015910 idhA; (GenBank) Inositol 2-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369] D ROLI_045910 rfbA; (GenBank) Glucose-1-phosphate thymidylyltransferase 1 K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D ROLI_045930 rffG; (GenBank) dTDP-glucose 4,6-dehydratase 2 K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D ROLI_045940 rfbC; (GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D ROLI_045920 rfbD; (GenBank) dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 00524 Neomycin, kanamycin and gentamicin biosynthesis D ROLI_017360 glk; (GenBank) Glucokinase K00845 glk; glucokinase [EC:2.7.1.2] C 00525 Acarbose and validamycin biosynthesis [PATH:rfu00525] D ROLI_045910 rfbA; (GenBank) Glucose-1-phosphate thymidylyltransferase 1 K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D ROLI_045930 rffG; (GenBank) dTDP-glucose 4,6-dehydratase 2 K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis [PATH:rfu00401] D ROLI_035610 tyrC; (GenBank) Cyclohexadienyl dehydrogenase K00220 tyrC; cyclohexadieny/prephenate dehydrogenase [EC:1.3.1.43 1.3.1.12] D ROLI_006320 Aspartate/prephenate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D ROLI_001800 tyrB; (GenBank) Aromatic-amino-acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D ROLI_025300 hisC_2; (GenBank) Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D ROLI_035620 hisC_3; (GenBank) Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis D ROLI_018560 trpE; (GenBank) Anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D ROLI_018530 carA_2; (GenBank) Carbamoyl-phosphate synthase small chain K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis D ROLI_028780 fabD; (GenBank) Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D ROLI_012550 fabG_2; (GenBank) 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D ROLI_028770 fabG_3; (GenBank) 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D ROLI_040790 tsaC1; (GenBank) 4-formylbenzenesulfonate dehydrogenase TsaC1/TsaC2 K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D ROLI_018610 fabI_1; (GenBank) Enoyl-[acyl-carrier-protein] reductase [NADH] FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D ROLI_032100 fabI_2; (GenBank) Enoyl-[acyl-carrier-protein] reductase [NADH] FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D ROLI_020490 acpP_1; (GenBank) Acyl carrier protein K02078 acpP; acyl carrier protein D ROLI_028760 acpP_2; (GenBank) Acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites [PATH:rfu00999] D ROLI_032010 metK; (GenBank) S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D ROLI_043940 aroE; (GenBank) Shikimate dehydrogenase (NADP(+)) K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D ROLI_028500 bglA; (GenBank) Beta-glucosidase A K05350 bglB; beta-glucosidase [EC:3.2.1.21] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:rfu00362] D ROLI_032160 catD; (GenBank) 3-oxoadipate enol-lactonase 2 K01055 pcaD; 3-oxoadipate enol-lactonase [EC:3.1.1.24] D ROLI_039050 pcaF; (GenBank) Beta-ketoadipyl-CoA thiolase K07823 pcaF; 3-oxoadipyl-CoA thiolase [EC:2.3.1.174] D ROLI_041080 kce_2; (GenBank) 3-keto-5-aminohexanoate cleavage enzyme K27848 E2.3.1.318; 3-oxoadipate:acetyl-CoA acetyltransferase [EC:2.3.1.318] D ROLI_041070 pcaG; (GenBank) Protocatechuate 3,4-dioxygenase alpha chain K00448 pcaG; protocatechuate 3,4-dioxygenase, alpha subunit [EC:1.13.11.3] D ROLI_041060 pcaH; (GenBank) Protocatechuate 3,4-dioxygenase beta chain K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3] D ROLI_032170 pcaB; (GenBank) 3-carboxy-cis,cis-muconate cycloisomerase K01857 pcaB; 3-carboxy-cis,cis-muconate cycloisomerase [EC:5.5.1.2] D ROLI_012440 hypothetical protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44] D ROLI_027470 hypothetical protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44] D ROLI_041050 hypothetical protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44] D ROLI_001920 ddmA1; (GenBank) Dicamba O-demethylase 1, ferredoxin reductase component K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] D ROLI_008370 fdxE; (GenBank) Ferredoxin-6 K04755 fdx; ferredoxin, 2Fe-2S D ROLI_015820 pobA; (GenBank) p-hydroxybenzoate hydroxylase K00481 pobA; p-hydroxybenzoate 3-monooxygenase [EC:1.14.13.2] D ROLI_036890 hbaA; (GenBank) 4-hydroxybenzoate--CoA/benzoate--CoA ligase K04105 hbaA; 4-hydroxybenzoate-CoA ligase [EC:6.2.1.27 6.2.1.25] D ROLI_044300 1,4-dihydroxy-2-naphthoyl-CoA hydrolase K01075 E3.1.2.23; 4-hydroxybenzoyl-CoA thioesterase [EC:3.1.2.23] D ROLI_032520 fadJ_2; (GenBank) Fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D ROLI_031590 fadJ_1; (GenBank) Fatty acid oxidation complex subunit alpha K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D ROLI_032350 acdA_2; (GenBank) Acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D ROLI_004980 mmgB; (GenBank) putative 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D ROLI_003450 thlA; (GenBank) Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ROLI_006990 phaA_1; (GenBank) Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ROLI_026880 phaA_2; (GenBank) Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ROLI_032500 fadA; (GenBank) Putative acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ROLI_045040 bktB; (GenBank) Beta-ketothiolase BktB K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ROLI_036830 boxA; (GenBank) Benzoyl-CoA oxygenase component A K15511 boxA; benzoyl-CoA 2,3-epoxidase subunit A [EC:1.14.13.208] D ROLI_036850 boxB; (GenBank) Benzoyl-CoA oxygenase component B K15512 boxB; benzoyl-CoA 2,3-epoxidase subunit B [EC:1.14.13.208] D ROLI_036860 boxC; (GenBank) Benzoyl-CoA-dihydrodiol lyase K15513 boxC; benzoyl-CoA-dihydrodiol lyase [EC:4.1.2.44] C 00627 Aminobenzoate degradation [PATH:rfu00627] D ROLI_008190 Low-molecular weight cobalt-containing nitrile hydratase subunit alpha K01721 nthA; nitrile hydratase subunit alpha [EC:4.2.1.84] D ROLI_008200 Low-molecular weight cobalt-containing nitrile hydratase subunit beta K20807 nthB; nitrile hydratase subunit beta [EC:4.2.1.84] D ROLI_022720 aam; (GenBank) Acylamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D ROLI_013360 mdlB_1; (GenBank) (S)-mandelate dehydrogenase K15054 mdlB; (S)-mandelate dehydrogenase [EC:1.1.99.31] D ROLI_036890 hbaA; (GenBank) 4-hydroxybenzoate--CoA/benzoate--CoA ligase K04105 hbaA; 4-hydroxybenzoate-CoA ligase [EC:6.2.1.27 6.2.1.25] D ROLI_017490 bclA_1; (GenBank) Benzoate--CoA ligase K08295 abmG; 2-aminobenzoate-CoA ligase [EC:6.2.1.32] D ROLI_044310 namA_2; (GenBank) NADPH dehydrogenase K09461 E1.14.13.40; anthraniloyl-CoA monooxygenase [EC:1.14.13.40] C 00364 Fluorobenzoate degradation D ROLI_008190 Low-molecular weight cobalt-containing nitrile hydratase subunit alpha K01721 nthA; nitrile hydratase subunit alpha [EC:4.2.1.84] D ROLI_008200 Low-molecular weight cobalt-containing nitrile hydratase subunit beta K20807 nthB; nitrile hydratase subunit beta [EC:4.2.1.84] C 00625 Chloroalkane and chloroalkene degradation [PATH:rfu00625] D ROLI_032970 dhmA; (GenBank) Haloalkane dehalogenase K01563 dhaA; haloalkane dehalogenase [EC:3.8.1.5] D ROLI_015470 flhA_1; (GenBank) S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D ROLI_041970 flhA_3; (GenBank) S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D ROLI_003660 ald_2; (GenBank) 3-succinoylsemialdehyde-pyridine dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D ROLI_003940 betB_1; (GenBank) NAD/NADP-dependent betaine aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D ROLI_010250 puuC_1; (GenBank) NADP/NAD-dependent aldehyde dehydrogenase PuuC K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D ROLI_022830 dehH1; (GenBank) Haloacetate dehalogenase H-1 K01561 dehH; haloacetate dehalogenase [EC:3.8.1.3] D ROLI_032130 (S)-2-haloacid dehalogenase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] D ROLI_039830 C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:rfu00361] D ROLI_032970 dhmA; (GenBank) Haloalkane dehalogenase K01563 dhaA; haloalkane dehalogenase [EC:3.8.1.5] D ROLI_032130 (S)-2-haloacid dehalogenase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] D ROLI_022830 dehH1; (GenBank) Haloacetate dehalogenase H-1 K01561 dehH; haloacetate dehalogenase [EC:3.8.1.3] D ROLI_039830 C 00623 Toluene degradation C 00622 Xylene degradation C 00633 Nitrotoluene degradation C 00642 Ethylbenzene degradation C 00643 Styrene degradation [PATH:rfu00643] D ROLI_029210 hmgA; (GenBank) Homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5] D ROLI_029250 hypothetical protein K01555 FAH; fumarylacetoacetase [EC:3.7.1.2] D ROLI_008190 Low-molecular weight cobalt-containing nitrile hydratase subunit alpha K01721 nthA; nitrile hydratase subunit alpha [EC:4.2.1.84] D ROLI_008200 Low-molecular weight cobalt-containing nitrile hydratase subunit beta K20807 nthB; nitrile hydratase subunit beta [EC:4.2.1.84] D ROLI_022720 aam; (GenBank) Acylamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] C 00791 Atrazine degradation [PATH:rfu00791] D ROLI_038470 pxpC; (GenBank) 5-oxoprolinase subunit C K01457 atzF; allophanate hydrolase [EC:3.5.1.54] D ROLI_015510 ureC1; (GenBank) Urease subunit alpha 1 K01428 ureC; urease subunit alpha [EC:3.5.1.5] D ROLI_015540 ureB1; (GenBank) Urease subunit beta 1 K01429 ureB; urease subunit beta [EC:3.5.1.5] D ROLI_015550 ureA; (GenBank) Urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5] C 00930 Caprolactam degradation [PATH:rfu00930] D ROLI_037670 alkB2; (GenBank) Alkane 1-monooxygenase 2 K00496 alkB1_2; alkane 1-monooxygenase [EC:1.14.15.3] D ROLI_042410 gnl; (GenBank) Gluconolactonase K01053 gnl; gluconolactonase [EC:3.1.1.17] D ROLI_032520 fadJ_2; (GenBank) Fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] C 00363 Bisphenol degradation C 00621 Dioxin degradation C 00626 Naphthalene degradation [PATH:rfu00626] D ROLI_015470 flhA_1; (GenBank) S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D ROLI_041970 flhA_3; (GenBank) S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] C 00624 Polycyclic aromatic hydrocarbon degradation D ROLI_041070 pcaG; (GenBank) Protocatechuate 3,4-dioxygenase alpha chain K00448 pcaG; protocatechuate 3,4-dioxygenase, alpha subunit [EC:1.13.11.3] D ROLI_041060 pcaH; (GenBank) Protocatechuate 3,4-dioxygenase beta chain K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3] C 00365 Furfural degradation C 00984 Steroid degradation D ROLI_040420 yfdE_2; (GenBank) Acetyl-CoA:oxalate CoA-transferase K01796 AMACR; alpha-methylacyl-CoA racemase [EC:5.1.99.4] C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:rfu03020] D ROLI_035480 rpoB; (GenBank) DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D ROLI_035470 rpoC; (GenBank) DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D ROLI_034040 rpoA; (GenBank) DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D ROLI_004730 rpoZ; (GenBank) DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:rfu03010] D ROLI_031950 rpsA; (GenBank) 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D ROLI_020430 rpsB; (GenBank) 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D ROLI_035310 rpsC; (GenBank) 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D ROLI_041220 rpsD; (GenBank) 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D ROLI_034130 rpsE; (GenBank) 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D ROLI_028820 rpsF; (GenBank) 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D ROLI_035420 rpsG; (GenBank) 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D ROLI_034160 rpsH; (GenBank) 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D ROLI_023160 rpsI; (GenBank) 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D ROLI_035390 rpsJ; (GenBank) 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D ROLI_034050 rpsK; (GenBank) 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D ROLI_035430 rpsL; (GenBank) 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D ROLI_034060 rpsM; (GenBank) 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D ROLI_034170 rpsN; (GenBank) 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D ROLI_003720 rpsO; (GenBank) 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D ROLI_036660 rpsP; (GenBank) 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D ROLI_034210 rpsQ; (GenBank) 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D ROLI_028830 rpsR; (GenBank) 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D ROLI_035330 rpsS; (GenBank) 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D ROLI_045110 rpsT; (GenBank) 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D ROLI_003270 rpsU; (GenBank) 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D ROLI_035510 rplA; (GenBank) 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D ROLI_035340 rplB; (GenBank) 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D ROLI_035380 hypothetical protein K02906 RP-L3; large subunit ribosomal protein L3 D ROLI_035370 rplD; (GenBank) 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D ROLI_034180 rplE; (GenBank) 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D ROLI_034150 rplF; (GenBank) 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D ROLI_035490 rplL; (GenBank) 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D ROLI_028840 hypothetical protein K02939 RP-L9; large subunit ribosomal protein L9 D ROLI_035500 rplJ; (GenBank) 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D ROLI_035520 rplK; (GenBank) 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D ROLI_023170 rplM; (GenBank) 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D ROLI_034200 rplN; (GenBank) 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D ROLI_034100 rplO; (GenBank) 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D ROLI_035300 rplP; (GenBank) 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D ROLI_034030 rplQ; (GenBank) 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D ROLI_034140 rplR; (GenBank) 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D ROLI_036710 rplS; (GenBank) 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D ROLI_003100 rplT; (GenBank) 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D ROLI_020300 hypothetical protein K02888 RP-L21; large subunit ribosomal protein L21 D ROLI_035320 rplV; (GenBank) 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D ROLI_035360 rplW; (GenBank) 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D ROLI_034190 rplX; (GenBank) 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D ROLI_031820 rplY; (GenBank) 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D ROLI_020310 rpmA; (GenBank) 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D ROLI_030510 rpmB; (GenBank) 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D ROLI_034220 rpmC; (GenBank) 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D ROLI_034120 rpmD; (GenBank) 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D ROLI_036720 rpmE; (GenBank) 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D ROLI_019100 rpmF; (GenBank) 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D ROLI_009250 rpmG; (GenBank) 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D ROLI_003090 rpmI; (GenBank) 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D ROLI_000850 rpmJ; (GenBank) 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D ROLI_001020 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:rfu00970] D ROLI_001000 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D ROLI_002930 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D ROLI_001270 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D ROLI_002770 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D ROLI_005900 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D ROLI_040340 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D ROLI_024470 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D ROLI_022840 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D ROLI_025410 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D ROLI_032990 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D ROLI_012830 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D ROLI_008960 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D ROLI_009910 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D ROLI_021300 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D ROLI_024690 tRNA-His K14226 tRNA-His; tRNA His D ROLI_000990 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D ROLI_005110 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D ROLI_008840 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D ROLI_013190 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D ROLI_022220 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D ROLI_005670 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D ROLI_024010 tRNA-Met K14230 tRNA-Met; tRNA Met D ROLI_036930 tRNA-Met K14230 tRNA-Met; tRNA Met D ROLI_038130 tRNA-Met K14230 tRNA-Met; tRNA Met D ROLI_030440 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D ROLI_018650 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D ROLI_019050 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D ROLI_010330 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D ROLI_020030 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D ROLI_020270 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D ROLI_024120 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D ROLI_006110 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D ROLI_010780 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D ROLI_035550 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D ROLI_009760 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D ROLI_000860 tRNA-Val K14237 tRNA-Val; tRNA Val D ROLI_022880 tRNA-Val K14237 tRNA-Val; tRNA Val D ROLI_018450 gltX_1; (GenBank) Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D ROLI_035870 gltX1; (GenBank) Glutamate--tRNA ligase 1 K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D ROLI_009190 gatA; (GenBank) Glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D ROLI_037340 cnbH; (GenBank) 2-amino-5-chloromuconic acid deaminase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D ROLI_011680 gatB; (GenBank) Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D ROLI_009180 gatC; (GenBank) Glutamyl-tRNA(Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D ROLI_021210 alaS; (GenBank) Alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D ROLI_036310 aspS; (GenBank) Aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D ROLI_008560 glyQ; (GenBank) Glycine--tRNA ligase alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D ROLI_008580 hypothetical protein K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D ROLI_006410 thrS; (GenBank) Threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D ROLI_012920 serS; (GenBank) Serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D ROLI_018760 cysS; (GenBank) Cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D ROLI_014820 metG; (GenBank) Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D ROLI_004480 fmt; (GenBank) Methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D ROLI_025270 hypothetical protein K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D ROLI_037460 leuS; (GenBank) Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D ROLI_026430 ileS; (GenBank) Isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D ROLI_034490 lysS; (GenBank) Lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6] D ROLI_018990 argS; (GenBank) Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D ROLI_028950 proS; (GenBank) Proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D ROLI_033730 hisS; (GenBank) Histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D ROLI_003160 pheS; (GenBank) Phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D ROLI_003190 pheT; (GenBank) Phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D ROLI_019170 tyrS; (GenBank) Tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D ROLI_036230 trpS; (GenBank) Tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes D ROLI_004800 rnc; (GenBank) Ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3] B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:rfu03060] D ROLI_034090 secY; (GenBank) Protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D ROLI_035540 secE; (GenBank) Protein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D ROLI_008180 hypothetical protein K03075 secG; preprotein translocase subunit SecG D ROLI_028010 secD; (GenBank) Protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D ROLI_028000 secF; (GenBank) Protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D ROLI_028020 yajC; (GenBank) Sec translocon accessory complex subunit YajC K03210 yajC; preprotein translocase subunit YajC D ROLI_033870 yidC; (GenBank) Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D ROLI_043430 secA; (GenBank) Protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D ROLI_043970 secB; (GenBank) Protein-export protein SecB K03071 secB; preprotein translocase subunit SecB D ROLI_036600 ffh; (GenBank) Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D ROLI_008440 ftsY; (GenBank) Signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor D ROLI_012640 tatA; (GenBank) Sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA D ROLI_012650 tatB; (GenBank) Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB D ROLI_012660 tatC; (GenBank) Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC D ROLI_004790 lepB; (GenBank) Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D ROLI_003900 lspA; (GenBank) Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:rfu04122] D ROLI_021100 nifS; (GenBank) Cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D ROLI_047170 iscS; (GenBank) Cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D ROLI_001790 sseA; (GenBank) 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D ROLI_023820 tusA; (GenBank) Sulfur carrier protein TusA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D ROLI_023310 mnmA; (GenBank) tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D ROLI_034730 moaE; (GenBank) Molybdopterin synthase catalytic subunit K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D ROLI_011930 moaA; (GenBank) GTP 3',8-cyclase K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D ROLI_034740 moaD; (GenBank) Molybdopterin synthase sulfur carrier subunit K03636 moaD; sulfur-carrier protein D ROLI_018490 moaC; (GenBank) Cyclic pyranopterin monophosphate synthase K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D ROLI_031070 moaB; (GenBank) Molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75] C 03050 Proteasome C 03018 RNA degradation [PATH:rfu03018] D ROLI_039550 rppH; (GenBank) RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D ROLI_023830 rne; (GenBank) Ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] D ROLI_019260 eno; (GenBank) Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D ROLI_003690 pnp; (GenBank) Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D ROLI_019290 rhlE_2; (GenBank) ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D ROLI_000460 rnr; (GenBank) Ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D ROLI_002880 deaD; (GenBank) ATP-dependent RNA helicase DeaD K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D ROLI_043010 recQ; (GenBank) ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D ROLI_043910 rho; (GenBank) Transcription termination factor Rho K03628 rho; transcription termination factor Rho D ROLI_012520 rnj1; (GenBank) Ribonuclease J 1 K12574 rnj; ribonuclease J [EC:3.1.-.-] D ROLI_043400 dnaK; (GenBank) Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D ROLI_007260 groL; (GenBank) 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D ROLI_021640 hfq; (GenBank) RNA-binding protein Hfq K03666 hfq; host factor-I protein D ROLI_028980 ppk; (GenBank) Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D ROLI_023080 Polyphosphate:NDP phosphotransferase 3 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D ROLI_034640 ppk2; (GenBank) Polyphosphate:NDP phosphotransferase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D ROLI_043680 cca; (GenBank) CCA-adding enzyme K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:rfu03030] D ROLI_043960 dnaQ; (GenBank) DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D ROLI_033750 dnaE1; (GenBank) DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D ROLI_037230 hypothetical protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D ROLI_010290 hypothetical protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D ROLI_037480 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D ROLI_019520 hypothetical protein K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D ROLI_000020 dnaN; (GenBank) Beta sliding clamp K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D ROLI_018250 dnaB; (GenBank) Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D ROLI_024870 dnaG; (GenBank) DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D ROLI_023510 ssb; (GenBank) Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D ROLI_004660 rnhA; (GenBank) Ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D ROLI_037700 rnhB; (GenBank) Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D ROLI_042910 polA; (GenBank) DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D ROLI_023280 ligA; (GenBank) DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:rfu03410] D ROLI_039530 nth; (GenBank) Endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D ROLI_018510 ung; (GenBank) Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D ROLI_037660 mutY; (GenBank) Adenine DNA glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D ROLI_045070 mutM; (GenBank) Formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D ROLI_018820 hypothetical protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D ROLI_031090 hypothetical protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D ROLI_039270 hypothetical protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D ROLI_018940 xthA_1; (GenBank) Exodeoxyribonuclease III K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2] D ROLI_037390 xthA_2; (GenBank) Exodeoxyribonuclease III K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2] D ROLI_042910 polA; (GenBank) DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D ROLI_012840 recJ; (GenBank) Single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D ROLI_023280 ligA; (GenBank) DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:rfu03420] D ROLI_021560 mfd; (GenBank) Transcription-repair-coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D ROLI_024260 uvrA; (GenBank) UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A D ROLI_034410 uvrB; (GenBank) UvrABC system protein B K03702 uvrB; excinuclease ABC subunit B D ROLI_034760 uvrC; (GenBank) UvrABC system protein C K03703 uvrC; excinuclease ABC subunit C D ROLI_011350 pcrA; (GenBank) ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D ROLI_042910 polA; (GenBank) DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D ROLI_023280 ligA; (GenBank) DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03430 Mismatch repair [PATH:rfu03430] D ROLI_043800 mutS; (GenBank) DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D ROLI_004000 mutL; (GenBank) DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D ROLI_011350 pcrA; (GenBank) ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D ROLI_008400 xseA; (GenBank) Exodeoxyribonuclease 7 large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D ROLI_005410 xseB; (GenBank) Exodeoxyribonuclease 7 small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D ROLI_012840 recJ; (GenBank) Single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D ROLI_023510 ssb; (GenBank) Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D ROLI_033750 dnaE1; (GenBank) DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D ROLI_000020 dnaN; (GenBank) Beta sliding clamp K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D ROLI_037230 hypothetical protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D ROLI_037480 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D ROLI_010290 hypothetical protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D ROLI_043960 dnaQ; (GenBank) DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D ROLI_019520 hypothetical protein K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D ROLI_023280 ligA; (GenBank) DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03440 Homologous recombination [PATH:rfu03440] D ROLI_012840 recJ; (GenBank) Single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D ROLI_023510 ssb; (GenBank) Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D ROLI_000030 recF; (GenBank) DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF D ROLI_004830 recO; (GenBank) DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D ROLI_037250 recR; (GenBank) Recombination protein RecR K06187 recR; recombination protein RecR D ROLI_021220 recA; (GenBank) Protein RecA K03553 recA; recombination protein RecA D ROLI_042910 polA; (GenBank) DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D ROLI_026290 ruvA; (GenBank) Holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D ROLI_026280 ruvB; (GenBank) Holliday junction ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D ROLI_026300 ruvC; (GenBank) Crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D ROLI_023270 recG; (GenBank) ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D ROLI_033750 dnaE1; (GenBank) DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D ROLI_000020 dnaN; (GenBank) Beta sliding clamp K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D ROLI_037230 hypothetical protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D ROLI_037480 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D ROLI_010290 hypothetical protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D ROLI_043960 dnaQ; (GenBank) DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D ROLI_019520 hypothetical protein K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D ROLI_026350 priA; (GenBank) Primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus and Alphavirus C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus C 03273 Virion - Lassa virus and SFTS virus C 03272 Virion - Hepatitis viruses C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:rfu02010] D ROLI_016620 tupA; (GenBank) Tungstate-binding protein TupA K05772 tupA; tungstate transport system substrate-binding protein D ROLI_016600 tupB; (GenBank) Tungstate uptake system permease protein TupB K05773 tupB; tungstate transport system permease protein D ROLI_016610 tupC; (GenBank) Tungstate uptake system ATP-binding protein TupC K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6] D ROLI_002830 hypothetical protein K15551 tauA; taurine transport system substrate-binding protein D ROLI_002850 hypothetical protein K15552 tauC; taurine transport system permease protein D ROLI_002840 tauB; (GenBank) Taurine import ATP-binding protein TauB K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7] D ROLI_016380 modA; (GenBank) Molybdate-binding protein ModA K02020 modA; molybdate transport system substrate-binding protein D ROLI_016370 modB; (GenBank) Molybdenum transport system permease protein ModB K02018 modB; molybdate transport system permease protein D ROLI_016360 btuD_3; (GenBank) Vitamin B12 import ATP-binding protein BtuD K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D ROLI_015180 futA1; (GenBank) Iron uptake protein A1 K02012 afuA; iron(III) transport system substrate-binding protein D ROLI_017940 hypothetical protein K02012 afuA; iron(III) transport system substrate-binding protein D ROLI_015170 hypothetical protein K02011 afuB; iron(III) transport system permease protein D ROLI_017930 hypothetical protein K02011 afuB; iron(III) transport system permease protein D ROLI_012580 fbpC2; (GenBank) Fe(3+) ions import ATP-binding protein FbpC 2 K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D ROLI_017920 potA_4; (GenBank) Spermidine/putrescine import ATP-binding protein PotA K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D ROLI_005510 thiB; (GenBank) Thiamine-binding periplasmic protein K02064 thiB; thiamine transport system substrate-binding protein D ROLI_005520 hypothetical protein K02063 thiP; thiamine transport system permease protein D ROLI_005530 thiQ; (GenBank) Thiamine import ATP-binding protein ThiQ K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15] D ROLI_010390 potD; (GenBank) Spermidine/putrescine-binding periplasmic protein K11069 potD; spermidine/putrescine transport system substrate-binding protein D ROLI_013740 hypothetical protein K11069 potD; spermidine/putrescine transport system substrate-binding protein D ROLI_018200 spuD_2; (GenBank) Putrescine-binding periplasmic protein SpuD K11069 potD; spermidine/putrescine transport system substrate-binding protein D ROLI_010420 ydcV_2; (GenBank) Inner membrane ABC transporter permease protein YdcV K11070 potC; spermidine/putrescine transport system permease protein D ROLI_013760 ydcV_3; (GenBank) Inner membrane ABC transporter permease protein YdcV K11070 potC; spermidine/putrescine transport system permease protein D ROLI_018210 ydcV_4; (GenBank) Inner membrane ABC transporter permease protein YdcV K11070 potC; spermidine/putrescine transport system permease protein D ROLI_010410 potB_1; (GenBank) Spermidine/putrescine transport system permease protein PotB K11071 potB; spermidine/putrescine transport system permease protein D ROLI_013750 potB_2; (GenBank) Spermidine/putrescine transport system permease protein PotB K11071 potB; spermidine/putrescine transport system permease protein D ROLI_018220 potB_3; (GenBank) Spermidine/putrescine transport system permease protein PotB K11071 potB; spermidine/putrescine transport system permease protein D ROLI_010400 potA_2; (GenBank) Spermidine/putrescine import ATP-binding protein PotA K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D ROLI_013770 potA_3; (GenBank) Spermidine/putrescine import ATP-binding protein PotA K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D ROLI_018230 potA_5; (GenBank) Spermidine/putrescine import ATP-binding protein PotA K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D ROLI_000560 spuD_1; (GenBank) Putrescine-binding periplasmic protein SpuD K11073 potF; putrescine transport system substrate-binding protein D ROLI_000590 ydcV_1; (GenBank) Inner membrane ABC transporter permease protein YdcV K11074 potI; putrescine transport system permease protein D ROLI_000580 potH; (GenBank) Putrescine transport system permease protein PotH K11075 potH; putrescine transport system permease protein D ROLI_000570 potA_1; (GenBank) Spermidine/putrescine import ATP-binding protein PotA K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16] D ROLI_009660 hypothetical protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D ROLI_019660 hypothetical protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D ROLI_041590 hypothetical protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D ROLI_009640 hypothetical protein K02001 proW; glycine betaine/proline transport system permease protein D ROLI_019670 opuAB; (GenBank) Glycine betaine transport system permease protein OpuAB K02001 proW; glycine betaine/proline transport system permease protein D ROLI_041570 hypothetical protein K02001 proW; glycine betaine/proline transport system permease protein D ROLI_009650 gbuA_1; (GenBank) Glycine betaine/carnitine transport ATP-binding protein GbuA K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9] D ROLI_019680 opuAA_1; (GenBank) Glycine betaine transport ATP-binding protein OpuAA K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9] D ROLI_041580 opuAA_2; (GenBank) Glycine betaine transport ATP-binding protein OpuAA K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9] D ROLI_007570 malK_1; (GenBank) Maltose/maltodextrin import ATP-binding protein MalK K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D ROLI_010160 malK_2; (GenBank) Maltose/maltodextrin import ATP-binding protein MalK K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D ROLI_017480 malK_3; (GenBank) Maltose/maltodextrin import ATP-binding protein MalK K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D ROLI_027130 ugpC_4; (GenBank) sn-glycerol-3-phosphate import ATP-binding protein UgpC K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D ROLI_041470 malK_5; (GenBank) Maltose/maltodextrin import ATP-binding protein MalK K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D ROLI_013880 btuD_2; (GenBank) Vitamin B12 import ATP-binding protein BtuD K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D ROLI_016320 msiK; (GenBank) Diacetylchitobiose uptake system ATP-binding protein MsiK K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D ROLI_032330 msmX_2; (GenBank) Oligosaccharides import ATP-binding protein MsmX K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D ROLI_035260 msmX_3; (GenBank) Oligosaccharides import ATP-binding protein MsmX K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D ROLI_042550 malK_6; (GenBank) Maltose/maltodextrin import ATP-binding protein MalK K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D ROLI_043080 malK_7; (GenBank) Maltose/maltodextrin import ATP-binding protein MalK K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D ROLI_043090 sugC; (GenBank) Trehalose import ATP-binding protein SugC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D ROLI_010110 hypothetical protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D ROLI_010120 lacF_1; (GenBank) Lactose transport system permease protein LacF K10118 msmF; raffinose/stachyose/melibiose transport system permease protein D ROLI_010130 ngcG; (GenBank) Diacetylchitobiose uptake system permease protein NgcG K10119 msmG; raffinose/stachyose/melibiose transport system permease protein D ROLI_007540 hypothetical protein K10227 smoE; polyol transport system substrate-binding protein D ROLI_041500 hypothetical protein K10227 smoE; polyol transport system substrate-binding protein D ROLI_007550 sugA_1; (GenBank) Trehalose transport system permease protein SugA K10228 smoF; polyol transport system permease protein D ROLI_041490 sugA_3; (GenBank) Trehalose transport system permease protein SugA K10228 smoF; polyol transport system permease protein D ROLI_007560 dasC_1; (GenBank) Diacetylchitobiose uptake system permease protein DasC K10229 smoG; polyol transport system permease protein D ROLI_041480 dasC_3; (GenBank) Diacetylchitobiose uptake system permease protein DasC K10229 smoG; polyol transport system permease protein D ROLI_028480 hypothetical protein K10232 aglE; alpha-glucoside transport system substrate-binding protein D ROLI_028470 lacF_3; (GenBank) Lactose transport system permease protein LacF K10233 aglF; alpha-glucoside transport system permease protein D ROLI_028460 hypothetical protein K10234 aglG; alpha-glucoside transport system permease protein D ROLI_028440 malK_4; (GenBank) Maltose/maltodextrin import ATP-binding protein MalK K10235 aglK; alpha-glucoside transport system ATP-binding protein D ROLI_013410 hypothetical protein K10236 thuE; trehalose/maltose transport system substrate-binding protein D ROLI_001840 hypothetical protein K07323 mlaC; phospholipid transport system substrate-binding protein D ROLI_017680 hypothetical protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D ROLI_012790 mlaE; (GenBank) Intermembrane phospholipid transport system permease protein MlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D ROLI_012780 mkl; (GenBank) putative ribonucleotide transport ATP-binding protein mkl K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D ROLI_006820 tmpC; (GenBank) Membrane lipoprotein TmpC K07335 bmpA; basic membrane protein A and related proteins D ROLI_033820 Purine-binding protein K07335 bmpA; basic membrane protein A and related proteins D ROLI_035010 hypothetical protein K07335 bmpA; basic membrane protein A and related proteins D ROLI_006800 hypothetical protein K23535 nupB; general nucleoside transport system permease protein D ROLI_033800 hypothetical protein K23535 nupB; general nucleoside transport system permease protein D ROLI_035030 hypothetical protein K23535 nupB; general nucleoside transport system permease protein D ROLI_006790 rfuD; (GenBank) putative riboflavin import permease protein RfuD K23536 nupC; general nucleoside transport system permease protein D ROLI_033810 hypothetical protein K23536 nupC; general nucleoside transport system permease protein D ROLI_035040 hypothetical protein K23536 nupC; general nucleoside transport system permease protein D ROLI_006810 rbsA_3; (GenBank) Ribose import ATP-binding protein RbsA K23537 nupA; general nucleoside transport system ATP-binding protein D ROLI_033790 mglA; (GenBank) Galactose/methyl galactoside import ATP-binding protein MglA K23537 nupA; general nucleoside transport system ATP-binding protein D ROLI_035020 rbsA_8; (GenBank) Ribose import ATP-binding protein RbsA K23537 nupA; general nucleoside transport system ATP-binding protein D ROLI_000170 hypothetical protein K10439 rbsB; ribose transport system substrate-binding protein D ROLI_003620 hypothetical protein K10439 rbsB; ribose transport system substrate-binding protein D ROLI_013420 xypA; (GenBank) Xylitol-binding protein K10439 rbsB; ribose transport system substrate-binding protein D ROLI_015880 hypothetical protein K10439 rbsB; ribose transport system substrate-binding protein D ROLI_000190 alsC_1; (GenBank) D-allose transport system permease protein AlsC K10440 rbsC; ribose transport system permease protein D ROLI_003630 alsC_2; (GenBank) D-allose transport system permease protein AlsC K10440 rbsC; ribose transport system permease protein D ROLI_003640 alsC_3; (GenBank) D-allose transport system permease protein AlsC K10440 rbsC; ribose transport system permease protein D ROLI_013440 rbsC_2; (GenBank) Ribose import permease protein RbsC K10440 rbsC; ribose transport system permease protein D ROLI_013450 lsrD_1; (GenBank) Autoinducer 2 import system permease protein LsrD K10440 rbsC; ribose transport system permease protein D ROLI_015870 araH_1; (GenBank) L-arabinose transport system permease protein AraH K10440 rbsC; ribose transport system permease protein D ROLI_000180 rbsA_1; (GenBank) Ribose import ATP-binding protein RbsA K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D ROLI_003330 frcA_1; (GenBank) Fructose import ATP-binding protein FrcA K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D ROLI_003650 rbsA_2; (GenBank) Ribose import ATP-binding protein RbsA K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D ROLI_013460 rbsA_4; (GenBank) Ribose import ATP-binding protein RbsA K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D ROLI_015860 rbsA_5; (GenBank) Ribose import ATP-binding protein RbsA K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D ROLI_017310 hypothetical protein K10543 xylF; D-xylose transport system substrate-binding protein D ROLI_017320 xylH_1; (GenBank) Xylose transport system permease protein XylH K10544 xylH; D-xylose transport system permease protein D ROLI_017330 frcA_4; (GenBank) Fructose import ATP-binding protein FrcA K10545 xylG; D-xylose transport system ATP-binding protein [EC:7.5.2.10] D ROLI_017130 frcB; (GenBank) Fructose import binding protein FrcB K10552 frcB; fructose transport system substrate-binding protein D ROLI_017140 frcC; (GenBank) Fructose import permease protein FrcC K10553 frcC; fructose transport system permease protein D ROLI_017150 frcA_3; (GenBank) Fructose import ATP-binding protein FrcA K10554 frcA; fructose transport system ATP-binding protein D ROLI_027580 lsrB_2; (GenBank) Autoinducer 2-binding protein LsrB K10559 rhaS; rhamnose transport system substrate-binding protein D ROLI_027600 araH_2; (GenBank) L-arabinose transport system permease protein AraH K10560 rhaP; rhamnose transport system permease protein D ROLI_027610 lsrD_3; (GenBank) Autoinducer 2 import system permease protein LsrD K10561 rhaQ; rhamnose transport system permease protein D ROLI_027590 rbsA_7; (GenBank) Ribose import ATP-binding protein RbsA K10562 rhaT; rhamnose transport system ATP-binding protein [EC:7.5.2.-] D ROLI_000200 rbsC_1; (GenBank) Ribose import permease protein RbsC K17206 xltB; putative xylitol transport system permease protein D ROLI_003340 hypothetical protein K17209 iatP; inositol transport system permease protein D ROLI_017090 hypothetical protein K17321 glpV; glycerol transport system substrate-binding protein D ROLI_017050 melD_1; (GenBank) Melibiose/raffinose/stachyose import permease protein MelD K17322 glpP; glycerol transport system permease protein D ROLI_017060 dasC_2; (GenBank) Diacetylchitobiose uptake system permease protein DasC K17323 glpQ; glycerol transport system permease protein D ROLI_017030 msmX_1; (GenBank) Oligosaccharides import ATP-binding protein MsmX K17324 glpS; glycerol transport system ATP-binding protein D ROLI_017040 ugpC_1; (GenBank) sn-glycerol-3-phosphate import ATP-binding protein UgpC K17325 glpT; glycerol transport system ATP-binding protein D ROLI_018020 ugpB_1; (GenBank) sn-glycerol-3-phosphate-binding periplasmic protein UgpB K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein D ROLI_018070 ugpB_2; (GenBank) sn-glycerol-3-phosphate-binding periplasmic protein UgpB K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein D ROLI_037880 ugpB_3; (GenBank) sn-glycerol-3-phosphate-binding periplasmic protein UgpB K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein D ROLI_018030 melD_3; (GenBank) Melibiose/raffinose/stachyose import permease protein MelD K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein D ROLI_018080 ugpA_1; (GenBank) sn-glycerol-3-phosphate transport system permease protein UgpA K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein D ROLI_037870 lacF_4; (GenBank) Lactose transport system permease protein LacF K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein D ROLI_018040 lacG_1; (GenBank) Lactose transport system permease protein LacG K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein D ROLI_018090 lacG_2; (GenBank) Lactose transport system permease protein LacG K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein D ROLI_037860 araQ; (GenBank) L-arabinose transport system permease protein AraQ K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein D ROLI_018010 ugpC_2; (GenBank) sn-glycerol-3-phosphate import ATP-binding protein UgpC K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10] D ROLI_018100 ugpC_3; (GenBank) sn-glycerol-3-phosphate import ATP-binding protein UgpC K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10] D ROLI_037890 msmX_4; (GenBank) Oligosaccharides import ATP-binding protein MsmX K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10] D ROLI_020690 sphX; (GenBank) Protein SphX K02040 pstS; phosphate transport system substrate-binding protein D ROLI_043420 hypothetical protein K02040 pstS; phosphate transport system substrate-binding protein D ROLI_020700 hypothetical protein K02037 pstC; phosphate transport system permease protein D ROLI_020710 hypothetical protein K02038 pstA; phosphate transport system permease protein D ROLI_020720 pstB; (GenBank) Phosphate import ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D ROLI_017960 ptxB; (GenBank) putative phosphite transport system-binding protein PtxB K02044 phnD; phosphonate transport system substrate-binding protein D ROLI_020780 phnD2; (GenBank) putative ABC transporter phosphonate/phosphite binding protein PhnD2 K02044 phnD; phosphonate transport system substrate-binding protein D ROLI_017980 phnE_1; (GenBank) Phosphate-import permease protein PhnE K02042 phnE; phosphonate transport system permease protein D ROLI_017990 phnE_2; (GenBank) Phosphate-import permease protein PhnE K02042 phnE; phosphonate transport system permease protein D ROLI_020790 hypothetical protein K02042 phnE; phosphonate transport system permease protein D ROLI_020800 hypothetical protein K02042 phnE; phosphonate transport system permease protein D ROLI_017970 phnC_1; (GenBank) Phosphate-import ATP-binding protein PhnC K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2] D ROLI_020770 phnC_2; (GenBank) Phosphate-import ATP-binding protein PhnC K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2] D ROLI_027680 gltI_1; (GenBank) Glutamate/aspartate import solute-binding protein K10001 gltI; glutamate/aspartate transport system substrate-binding protein D ROLI_027660 gltK; (GenBank) Glutamate/aspartate import permease protein GltK K10002 gltK; glutamate/aspartate transport system permease protein D ROLI_027670 gltJ; (GenBank) Glutamate/aspartate import permease protein GltJ K10003 gltJ; glutamate/aspartate transport system permease protein D ROLI_027650 glnQ_1; (GenBank) Glutamine transport ATP-binding protein GlnQ K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1] D ROLI_033970 yhdW; (GenBank) Putative amino-acid ABC transporter-binding protein YhdW K09969 aapJ; general L-amino acid transport system substrate-binding protein D ROLI_033960 hypothetical protein K09970 aapQ; general L-amino acid transport system permease protein D ROLI_033950 yhdY; (GenBank) Inner membrane amino-acid ABC transporter permease protein YhdY K09971 aapM; general L-amino acid transport system permease protein D ROLI_033940 glnQ_2; (GenBank) Glutamine transport ATP-binding protein GlnQ K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1] D ROLI_000790 hypothetical protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D ROLI_017520 braC_1; (GenBank) Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D ROLI_017780 hypothetical protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D ROLI_020590 hypothetical protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D ROLI_026730 braC_2; (GenBank) Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D ROLI_039640 Leu/Ile/Val-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D ROLI_000760 livH_1; (GenBank) High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein D ROLI_017530 livH_2; (GenBank) High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein D ROLI_017770 livH_3; (GenBank) High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein D ROLI_020540 livH_4; (GenBank) High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein D ROLI_026750 livH_5; (GenBank) High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein D ROLI_039620 livH_7; (GenBank) High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein D ROLI_000780 hypothetical protein K01998 livM; branched-chain amino acid transport system permease protein D ROLI_017540 hypothetical protein K01998 livM; branched-chain amino acid transport system permease protein D ROLI_020530 hypothetical protein K01998 livM; branched-chain amino acid transport system permease protein D ROLI_026720 btuD_4; (GenBank) Vitamin B12 import ATP-binding protein BtuD K01995 livG; branched-chain amino acid transport system ATP-binding protein D ROLI_039630 hypothetical protein K01998 livM; branched-chain amino acid transport system permease protein D ROLI_000740 cysA_1; (GenBank) Sulfate/thiosulfate import ATP-binding protein CysA K01995 livG; branched-chain amino acid transport system ATP-binding protein D ROLI_017550 cysA_2; (GenBank) Sulfate/thiosulfate import ATP-binding protein CysA K01995 livG; branched-chain amino acid transport system ATP-binding protein D ROLI_017750 metN; (GenBank) Methionine import ATP-binding protein MetN K01995 livG; branched-chain amino acid transport system ATP-binding protein D ROLI_020580 lptB_1; (GenBank) Lipopolysaccharide export system ATP-binding protein LptB K01995 livG; branched-chain amino acid transport system ATP-binding protein D ROLI_039600 lptB_3; (GenBank) Lipopolysaccharide export system ATP-binding protein LptB K01995 livG; branched-chain amino acid transport system ATP-binding protein D ROLI_000800 livF_1; (GenBank) High-affinity branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein D ROLI_017560 livF_2; (GenBank) High-affinity branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein D ROLI_017740 livF_3; (GenBank) High-affinity branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein D ROLI_020560 livF_4; (GenBank) High-affinity branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein D ROLI_026740 livF_5; (GenBank) High-affinity branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein D ROLI_039610 livF_7; (GenBank) High-affinity branched-chain amino acid transport ATP-binding protein LivF K11958 natE; neutral amino acid transport system ATP-binding protein D ROLI_031360 amiC_2; (GenBank) Aliphatic amidase expression-regulating protein K11959 urtA; urea transport system substrate-binding protein D ROLI_031350 livH_6; (GenBank) High-affinity branched-chain amino acid transport system permease protein LivH K11960 urtB; urea transport system permease protein D ROLI_031340 hypothetical protein K11961 urtC; urea transport system permease protein D ROLI_011260 hypothetical protein K11962 urtD; urea transport system ATP-binding protein D ROLI_031330 lptB_2; (GenBank) Lipopolysaccharide export system ATP-binding protein LptB K11962 urtD; urea transport system ATP-binding protein D ROLI_031320 livF_6; (GenBank) High-affinity branched-chain amino acid transport ATP-binding protein LivF K11963 urtE; urea transport system ATP-binding protein D ROLI_014440 gsiC_2; (GenBank) Glutathione transport system permease protein GsiC K13890 gsiC; glutathione transport system permease protein D ROLI_037160 oppA; (GenBank) Periplasmic oligopeptide-binding protein K13893 yejA; microcin C transport system substrate-binding protein D ROLI_037150 yejB; (GenBank) Inner membrane ABC transporter permease protein YejB K13894 yejB; microcin C transport system permease protein D ROLI_037140 yejE; (GenBank) Inner membrane ABC transporter permease protein YejE K13895 yejE; microcin C transport system permease protein D ROLI_037130 yejF; (GenBank) putative ABC transporter ATP-binding protein YejF K13896 yejF; microcin C transport system ATP-binding protein D ROLI_017610 hypothetical protein K09815 znuA; zinc transport system substrate-binding protein D ROLI_017580 znuB; (GenBank) High-affinity zinc uptake system membrane protein ZnuB K09816 znuB; zinc transport system permease protein D ROLI_017590 znuC; (GenBank) Zinc import ATP-binding protein ZnuC K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D ROLI_003960 hypothetical protein K11707 troA; manganese/zinc/iron transport system substrate-binding protein D ROLI_003980 mntC; (GenBank) Manganese transport system membrane protein MntC K11708 troC; manganese/zinc/iron transport system permease protein D ROLI_003990 mntD; (GenBank) Manganese transport system membrane protein MntD K11709 troD; manganese/zinc/iron transport system permease protein D ROLI_003970 mntB; (GenBank) Manganese transport system ATP-binding protein MntB K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5] D ROLI_027820 hypothetical protein K03523 bioY; biotin transport system substrate-specific component D ROLI_028930 lolE; (GenBank) Lipoprotein-releasing system transmembrane protein LolE K09808 lolC_E_F; lipoprotein-releasing system permease protein D ROLI_028920 lolD; (GenBank) Lipoprotein-releasing system ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D ROLI_027940 hypothetical protein K02196 ccmD; heme exporter protein D D ROLI_027950 ccmC; (GenBank) Heme exporter protein C K02195 ccmC; heme exporter protein C D ROLI_027960 ccmB; (GenBank) Heme exporter protein B K02194 ccmB; heme exporter protein B D ROLI_027970 ccmA; (GenBank) Cytochrome c biogenesis ATP-binding export protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D ROLI_019500 hypothetical protein K07091 lptF; lipopolysaccharide export system permease protein D ROLI_019490 hypothetical protein K11720 lptG; lipopolysaccharide export system permease protein D ROLI_043220 lptB_4; (GenBank) Lipopolysaccharide export system ATP-binding protein LptB K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D ROLI_002220 nosY; (GenBank) putative ABC transporter permease protein NosY K19341 nosY; Cu-processing system permease protein D ROLI_002230 nosF; (GenBank) putative ABC transporter ATP-binding protein NosF K19340 nosF; Cu-processing system ATP-binding protein D ROLI_007710 hypothetical protein K09811 ftsX; cell division transport system permease protein D ROLI_007700 ftsE; (GenBank) Cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D ROLI_045870 Putative multidrug export ATP-binding/permease protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D ROLI_025110 atm1; (GenBank) ATM1-type heavy metal exporter K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter D ROLI_043670 Putative multidrug export ATP-binding/permease protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump D ROLI_016090 apxIB_1; (GenBank) Toxin RTX-I translocation ATP-binding protein K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D ROLI_044800 btuD_9; (GenBank) Vitamin B12 import ATP-binding protein BtuD K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D ROLI_044810 apxIB_2; (GenBank) Toxin RTX-I translocation ATP-binding protein K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D ROLI_001190 prsD_1; (GenBank) Type I secretion system ATP-binding protein PrsD K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase D ROLI_039210 prsD_2; (GenBank) Type I secretion system ATP-binding protein PrsD K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase D ROLI_045350 prsD_3; (GenBank) Type I secretion system ATP-binding protein PrsD K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase C 02060 Phosphotransferase system (PTS) [PATH:rfu02060] D ROLI_004960 ptsO; (GenBank) Phosphocarrier protein NPr K02784 ptsH; phosphocarrier protein HPr D ROLI_004950 hypothetical protein K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D ROLI_025660 ptsP; (GenBank) Phosphoenolpyruvate-dependent phosphotransferase system K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9] D ROLI_043200 ptsN; (GenBank) Nitrogen regulatory protein K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] C 03070 Bacterial secretion system [PATH:rfu03070] D ROLI_025390 bepC_2; (GenBank) Outer membrane efflux protein BepC K12340 tolC; outer membrane protein D ROLI_028010 secD; (GenBank) Protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D ROLI_028000 secF; (GenBank) Protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D ROLI_035540 secE; (GenBank) Protein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D ROLI_008180 hypothetical protein K03075 secG; preprotein translocase subunit SecG D ROLI_034090 secY; (GenBank) Protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D ROLI_028020 yajC; (GenBank) Sec translocon accessory complex subunit YajC K03210 yajC; preprotein translocase subunit YajC D ROLI_033870 yidC; (GenBank) Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D ROLI_043430 secA; (GenBank) Protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D ROLI_008440 ftsY; (GenBank) Signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor D ROLI_043970 secB; (GenBank) Protein-export protein SecB K03071 secB; preprotein translocase subunit SecB D ROLI_036600 ffh; (GenBank) Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D ROLI_012640 tatA; (GenBank) Sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA D ROLI_012650 tatB; (GenBank) Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB D ROLI_012660 tatC; (GenBank) Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC D ROLI_046830 hypothetical protein K03197 virB2; type IV secretion system protein VirB2 D ROLI_046820 hypothetical protein K03198 virB3; type IV secretion system protein VirB3 D ROLI_046780 hypothetical protein K03200 virB5; type IV secretion system protein VirB5 D ROLI_046760 virB9; (GenBank) Protein virB9 K03204 virB9; type IV secretion system protein VirB9 D ROLI_046670 hypothetical protein K03201 virB6; type IV secretion system protein VirB6 D ROLI_046770 hypothetical protein K03203 virB8; type IV secretion system protein VirB8 D ROLI_046750 hypothetical protein K03195 virB10; type IV secretion system protein VirB10 D ROLI_046810 virB4_2; (GenBank) Type IV secretion system protein virB4 K03199 virB4; type IV secretion system protein VirB4 [EC:7.4.2.8] D ROLI_046700 Type IV secretion system protein VirB11 K03196 virB11; type IV secretion system protein VirB11 [EC:7.4.2.8] D ROLI_046650 hypothetical protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8] D ROLI_047940 hypothetical protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8] D ROLI_006030 hcp1; (GenBank) Protein hcp1 K11903 hcp; type VI secretion system secreted protein Hcp D ROLI_008900 D ROLI_010650 D ROLI_013640 D ROLI_044800 btuD_9; (GenBank) Vitamin B12 import ATP-binding protein BtuD K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D ROLI_045430 D ROLI_048380 D ROLI_048590 B B 09132 Signal transduction C 02020 Two-component system [PATH:rfu02020] D ROLI_020680 rcsC_2; (GenBank) Sensor histidine kinase RcsC K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D ROLI_020740 phoB; (GenBank) Phosphate regulon transcriptional regulatory protein PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D ROLI_020690 sphX; (GenBank) Protein SphX K02040 pstS; phosphate transport system substrate-binding protein D ROLI_043420 hypothetical protein K02040 pstS; phosphate transport system substrate-binding protein D ROLI_024350 envZ; (GenBank) Osmolarity sensor protein EnvZ K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D ROLI_005420 ompR_1; (GenBank) Transcriptional regulatory protein OmpR K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR D ROLI_008350 degP; (GenBank) Periplasmic serine endoprotease DegP K04771 degP; serine protease Do [EC:3.4.21.107] D ROLI_006130 hypothetical protein K07810 cusF; Cu(I)/Ag(I) efflux system periplasmic protein CusF D ROLI_000690 hypothetical protein K02406 fliC; flagellin D ROLI_038650 motA; (GenBank) Motility protein A K02556 motA; chemotaxis protein MotA D ROLI_042320 arcA_2; (GenBank) Aerobic respiration control protein ArcA K07772 torR; two-component system, OmpR family, torCAD operon response regulator TorR D ROLI_004600 hypothetical protein K07793 tctA; putative tricarboxylic transport membrane protein D ROLI_009570 hypothetical protein K07793 tctA; putative tricarboxylic transport membrane protein D ROLI_010050 hypothetical protein K07793 tctA; putative tricarboxylic transport membrane protein D ROLI_016540 hypothetical protein K07793 tctA; putative tricarboxylic transport membrane protein D ROLI_004610 hypothetical protein K07794 tctB; putative tricarboxylic transport membrane protein D ROLI_004620 hypothetical protein K07795 tctC; putative tricarboxylic transport membrane protein D ROLI_009590 hypothetical protein K07795 tctC; putative tricarboxylic transport membrane protein D ROLI_010030 hypothetical protein K07795 tctC; putative tricarboxylic transport membrane protein D ROLI_021410 ctaA; (GenBank) Heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9] D ROLI_000010 dnaA; (GenBank) Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D ROLI_004920 sasA_1; (GenBank) Adaptive-response sensory-kinase SasA K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3] D ROLI_004910 creB; (GenBank) Transcriptional regulatory protein CreB K14981 chvI; two-component system, OmpR family, response regulator ChvI D ROLI_022580 nreC; (GenBank) Oxygen regulatory protein NreC K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL D ROLI_016460 frdA; (GenBank) Fumarate reductase flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D ROLI_016430 frdB; (GenBank) Fumarate reductase iron-sulfur subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D ROLI_016440 hypothetical protein K00246 frdC; succinate dehydrogenase subunit C D ROLI_016450 hypothetical protein K00247 frdD; succinate dehydrogenase subunit D D ROLI_002860 des; (GenBank) Fatty acid desaturase K10255 FAD6; acyl-lipid omega-6 desaturase (Delta-12 desaturase) [EC:1.14.19.23 1.14.19.45] D ROLI_025970 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA D ROLI_025980 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA D ROLI_025990 hypothetical protein K02279 cpaB; pilus assembly protein CpaB D ROLI_026000 sctC; (GenBank) Type 3 secretion system secretin K02280 cpaC; pilus assembly protein CpaC D ROLI_026020 hypothetical protein K02282 cpaE; pilus assembly protein CpaE D ROLI_026030 hypothetical protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D ROLI_026040 hypothetical protein K12510 tadB; tight adherence protein B D ROLI_026050 hypothetical protein K12511 tadC; tight adherence protein C D ROLI_036200 glnD; (GenBank) Bifunctional uridylyltransferase/uridylyl-removing enzyme K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59] D ROLI_001820 glnB_1; (GenBank) Nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1 D ROLI_027730 glnB_2; (GenBank) Nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1 D ROLI_021720 glnL; (GenBank) Sensory histidine kinase/phosphatase NtrB K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D ROLI_021710 ntrC; (GenBank) DNA-binding transcriptional regulator NtrC K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG D ROLI_008050 puuA_1; (GenBank) Gamma-glutamylputrescine synthetase PuuA K01915 glnA; glutamine synthetase [EC:6.3.1.2] D ROLI_008070 puuA_2; (GenBank) Gamma-glutamylputrescine synthetase PuuA K01915 glnA; glutamine synthetase [EC:6.3.1.2] D ROLI_026690 glnA_1; (GenBank) Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D ROLI_027740 glnA_2; (GenBank) Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D ROLI_031410 ipuC; (GenBank) Glutamate--isopropylamine ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D ROLI_041750 glnT; (GenBank) Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D ROLI_021700 sasA_8; (GenBank) Adaptive-response sensory-kinase SasA K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D ROLI_021690 atoC; (GenBank) Regulatory protein AtoC K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX D ROLI_003450 thlA; (GenBank) Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ROLI_006990 phaA_1; (GenBank) Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ROLI_026880 phaA_2; (GenBank) Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ROLI_032500 fadA; (GenBank) Putative acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ROLI_045040 bktB; (GenBank) Beta-ketothiolase BktB K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ROLI_023850 dctB; (GenBank) C4-dicarboxylate transport sensor protein DctB K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3] D ROLI_022110 cheR; (GenBank) Chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D ROLI_019650 cheB_2; (GenBank) Protein-glutamate methylesterase/protein-glutamine glutaminase K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61] D ROLI_000130 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D ROLI_014810 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D ROLI_015890 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D ROLI_042480 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D ROLI_048350 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D ROLI_022100 cheW; (GenBank) Chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D ROLI_022090 cheA; (GenBank) Chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D ROLI_022080 cheY_1; (GenBank) Chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D ROLI_022120 cheY_2; (GenBank) Chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D ROLI_030120 hypothetical protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D ROLI_010530 cheB2; (GenBank) Protein-glutamate methylesterase/protein-glutamine glutaminase 2 K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D ROLI_014940 pleD; (GenBank) Response regulator PleD K02488 pleD; two-component system, cell cycle response regulator [EC:2.7.7.65] D ROLI_021230 rcsC_3; (GenBank) Sensor histidine kinase RcsC K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3] D ROLI_020380 hypothetical protein K13588 chpT; histidine phosphotransferase ChpT D ROLI_023290 ctrA; (GenBank) Cell cycle response regulator CtrA K13584 ctrA; two-component system, cell cycle response regulator CtrA D ROLI_003350 luxP; (GenBank) Autoinducer 2-binding periplasmic protein LuxP K10910 luxP; autoinducer 2-binding periplasmic protein LuxP D ROLI_004120 Lactate-binding periplasmic protein K11688 dctP; TRAP-type transport system periplasmic protein D ROLI_010860 yiaO; (GenBank) 2,3-diketo-L-gulonate-binding periplasmic protein YiaO K11688 dctP; TRAP-type transport system periplasmic protein D ROLI_012970 dctP_1; (GenBank) Solute-binding protein K11688 dctP; TRAP-type transport system periplasmic protein D ROLI_013320 hypothetical protein K11688 dctP; TRAP-type transport system periplasmic protein D ROLI_015310 siaP_1; (GenBank) Sialic acid-binding periplasmic protein SiaP K11688 dctP; TRAP-type transport system periplasmic protein D ROLI_016780 Solute-binding protein K11688 dctP; TRAP-type transport system periplasmic protein D ROLI_016870 Monocarboxylate 2-oxoacid-binding periplasmic protein K11688 dctP; TRAP-type transport system periplasmic protein D ROLI_019910 dctP_2; (GenBank) C4-dicarboxylate-binding periplasmic protein DctP K11688 dctP; TRAP-type transport system periplasmic protein D ROLI_022560 Monocarboxylate 2-oxoacid-binding periplasmic protein K11688 dctP; TRAP-type transport system periplasmic protein D ROLI_028090 hypothetical protein K11688 dctP; TRAP-type transport system periplasmic protein D ROLI_028290 Solute-binding protein K11688 dctP; TRAP-type transport system periplasmic protein D ROLI_028380 tsaT; (GenBank) Outer membrane transporter protein TsaT K11688 dctP; TRAP-type transport system periplasmic protein D ROLI_029850 siaP_2; (GenBank) Sialic acid-binding periplasmic protein SiaP K11688 dctP; TRAP-type transport system periplasmic protein D ROLI_031420 Monocarboxylate 2-oxoacid-binding periplasmic protein K11688 dctP; TRAP-type transport system periplasmic protein D ROLI_034890 hypothetical protein K11688 dctP; TRAP-type transport system periplasmic protein D ROLI_036920 Solute-binding protein K11688 dctP; TRAP-type transport system periplasmic protein D ROLI_038520 hypothetical protein K11688 dctP; TRAP-type transport system periplasmic protein D ROLI_040060 hypothetical protein K11688 dctP; TRAP-type transport system periplasmic protein D ROLI_041020 Solute-binding protein K11688 dctP; TRAP-type transport system periplasmic protein D ROLI_004110 hypothetical protein K11689 dctQ; TRAP-type transport system small permease protein D ROLI_010840 hypothetical protein K11689 dctQ; TRAP-type transport system small permease protein D ROLI_012980 hypothetical protein K11689 dctQ; TRAP-type transport system small permease protein D ROLI_013300 hypothetical protein K11689 dctQ; TRAP-type transport system small permease protein D ROLI_015300 hypothetical protein K11689 dctQ; TRAP-type transport system small permease protein D ROLI_016790 hypothetical protein K11689 dctQ; TRAP-type transport system small permease protein D ROLI_016860 hypothetical protein K11689 dctQ; TRAP-type transport system small permease protein D ROLI_019920 dctQ; (GenBank) C4-dicarboxylate TRAP transporter small permease protein DctQ K11689 dctQ; TRAP-type transport system small permease protein D ROLI_028080 hypothetical protein K11689 dctQ; TRAP-type transport system small permease protein D ROLI_028280 teaB; (GenBank) Ectoine TRAP transporter small permease protein TeaB K11689 dctQ; TRAP-type transport system small permease protein D ROLI_028370 hypothetical protein K11689 dctQ; TRAP-type transport system small permease protein D ROLI_029840 hypothetical protein K11689 dctQ; TRAP-type transport system small permease protein D ROLI_031440 hypothetical protein K11689 dctQ; TRAP-type transport system small permease protein D ROLI_034900 hypothetical protein K11689 dctQ; TRAP-type transport system small permease protein D ROLI_036910 hypothetical protein K11689 dctQ; TRAP-type transport system small permease protein D ROLI_038510 hypothetical protein K11689 dctQ; TRAP-type transport system small permease protein D ROLI_040050 hypothetical protein K11689 dctQ; TRAP-type transport system small permease protein D ROLI_041030 hypothetical protein K11689 dctQ; TRAP-type transport system small permease protein D ROLI_004100 hypothetical protein K11690 dctM; TRAP-type transport system large permease protein D ROLI_010850 siaT; (GenBank) Sialic acid TRAP transporter permease protein SiaT K11690 dctM; TRAP-type transport system large permease protein D ROLI_012990 dctM_1; (GenBank) C4-dicarboxylate TRAP transporter large permease protein DctM K11690 dctM; TRAP-type transport system large permease protein D ROLI_013310 siaM_1; (GenBank) Sialic acid TRAP transporter large permease protein SiaM K11690 dctM; TRAP-type transport system large permease protein D ROLI_015290 siaM_2; (GenBank) Sialic acid TRAP transporter large permease protein SiaM K11690 dctM; TRAP-type transport system large permease protein D ROLI_016800 dctM_2; (GenBank) C4-dicarboxylate TRAP transporter large permease protein DctM K11690 dctM; TRAP-type transport system large permease protein D ROLI_016850 dctM_3; (GenBank) C4-dicarboxylate TRAP transporter large permease protein DctM K11690 dctM; TRAP-type transport system large permease protein D ROLI_019930 dctM_4; (GenBank) C4-dicarboxylate TRAP transporter large permease protein DctM K11690 dctM; TRAP-type transport system large permease protein D ROLI_028070 dctM_5; (GenBank) C4-dicarboxylate TRAP transporter large permease protein DctM K11690 dctM; TRAP-type transport system large permease protein D ROLI_028270 dctM_6; (GenBank) C4-dicarboxylate TRAP transporter large permease protein DctM K11690 dctM; TRAP-type transport system large permease protein D ROLI_028360 dctM_7; (GenBank) C4-dicarboxylate TRAP transporter large permease protein DctM K11690 dctM; TRAP-type transport system large permease protein D ROLI_029830 dctM_8; (GenBank) C4-dicarboxylate TRAP transporter large permease protein DctM K11690 dctM; TRAP-type transport system large permease protein D ROLI_031430 dctM_9; (GenBank) C4-dicarboxylate TRAP transporter large permease protein DctM K11690 dctM; TRAP-type transport system large permease protein D ROLI_034910 dctM_10; (GenBank) C4-dicarboxylate TRAP transporter large permease protein DctM K11690 dctM; TRAP-type transport system large permease protein D ROLI_036900 dctM_11; (GenBank) C4-dicarboxylate TRAP transporter large permease protein DctM K11690 dctM; TRAP-type transport system large permease protein D ROLI_038500 dctM_12; (GenBank) C4-dicarboxylate TRAP transporter large permease protein DctM K11690 dctM; TRAP-type transport system large permease protein D ROLI_040040 dctM_13; (GenBank) C4-dicarboxylate TRAP transporter large permease protein DctM K11690 dctM; TRAP-type transport system large permease protein D ROLI_041040 siaM_3; (GenBank) Sialic acid TRAP transporter large permease protein SiaM K11690 dctM; TRAP-type transport system large permease protein D ROLI_027650 glnQ_1; (GenBank) Glutamine transport ATP-binding protein GlnQ K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1] D ROLI_027660 gltK; (GenBank) Glutamate/aspartate import permease protein GltK K10002 gltK; glutamate/aspartate transport system permease protein D ROLI_027670 gltJ; (GenBank) Glutamate/aspartate import permease protein GltJ K10003 gltJ; glutamate/aspartate transport system permease protein D ROLI_027680 gltI_1; (GenBank) Glutamate/aspartate import solute-binding protein K10001 gltI; glutamate/aspartate transport system substrate-binding protein D ROLI_005600 crp_1; (GenBank) CRP-like cAMP-activated global transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D ROLI_044130 regB; (GenBank) Sensor histidine kinase RegB K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3] D ROLI_044150 regA; (GenBank) Photosynthetic apparatus regulatory protein RegA K15012 regA; two-component system, response regulator RegA D ROLI_021960 pucB; (GenBank) Light-harvesting protein B-800/850 beta chain K08939 pucB; light-harvesting protein B-800-850 beta chain D ROLI_040840 pufM; (GenBank) Reaction center protein M chain K08929 pufM; photosynthetic reaction center M subunit D ROLI_040850 pufL; (GenBank) Reaction center protein L chain K08928 pufL; photosynthetic reaction center L subunit D ROLI_040860 pufA; (GenBank) Light-harvesting protein B-875 alpha chain K08926 pufA; light-harvesting complex 1 alpha chain D ROLI_040870 pufB; (GenBank) Light-harvesting protein B-875 beta chain K08927 pufB; light-harvesting complex 1 beta chain D ROLI_002540 puhA; (GenBank) Reaction center protein H chain K13991 puhA; photosynthetic reaction center H subunit D ROLI_005570 petA; (GenBank) Ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D ROLI_005580 petB; (GenBank) Cytochrome b K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D ROLI_005590 petC; (GenBank) Cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D ROLI_002100 Cytochrome c2 K08738 CYC; cytochrome c D ROLI_002610 Cytochrome c-551 K08738 CYC; cytochrome c D ROLI_037170 cycM; (GenBank) Cytochrome c-552 K08738 CYC; cytochrome c D ROLI_038450 hypothetical protein K08738 CYC; cytochrome c D ROLI_041320 hypothetical protein K08738 CYC; cytochrome c D ROLI_041950 hypothetical protein K08738 CYC; cytochrome c D ROLI_037090 fixN; (GenBank) Cytochrome c oxidase subunit 1, bacteroid K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9] D ROLI_037080 hypothetical protein K00405 ccoO; cytochrome c oxidase cbb3-type subunit II D ROLI_037070 hypothetical protein K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV D ROLI_037060 ccoP; (GenBank) Cbb3-type cytochrome c oxidase subunit CcoP K00406 ccoP; cytochrome c oxidase cbb3-type subunit III D ROLI_025390 bepC_2; (GenBank) Outer membrane efflux protein BepC K12340 tolC; outer membrane protein D ROLI_024800 hypothetical protein K01991 wza; polysaccharide biosynthesis/export protein D ROLI_045150 hypothetical protein K01991 wza; polysaccharide biosynthesis/export protein C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04082 Neuroactive ligand signaling C 04081 Hormone signaling C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome D ROLI_014360 Formylglycine-generating enzyme K13444 SUMF1; formylglycine-generating enzyme [EC:1.8.3.7] C 04146 Peroxisome [PATH:rfu04146] D ROLI_040420 yfdE_2; (GenBank) Acetyl-CoA:oxalate CoA-transferase K01796 AMACR; alpha-methylacyl-CoA racemase [EC:5.1.99.4] D ROLI_000720 Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D ROLI_037200 nudC; (GenBank) NADH pyrophosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22] D ROLI_015200 sgaA_1; (GenBank) Serine--glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D ROLI_025320 sgaA_3; (GenBank) Serine--glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D ROLI_028300 sgaA_4; (GenBank) Serine--glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D ROLI_021150 icd_1; (GenBank) Isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D ROLI_035150 icd_2; (GenBank) Isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D ROLI_012030 liuE; (GenBank) 3-hydroxy-3-isohexenylglutaryl-CoA/hydroxy-methylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D ROLI_025150 sodB; (GenBank) Superoxide dismutase [Fe] K04564 SOD2; superoxide dismutase, Fe-Mn family [EC:1.15.1.1] C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis [PATH:rfu04148] D ROLI_022280 arcA_1; (GenBank) Arginase K01476 rocF; arginase [EC:3.5.3.1] D ROLI_037270 ldc; (GenBank) Lysine/ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D ROLI_005570 petA; (GenBank) Ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:rfu02024] D ROLI_003350 luxP; (GenBank) Autoinducer 2-binding periplasmic protein LuxP K10910 luxP; autoinducer 2-binding periplasmic protein LuxP D ROLI_021640 hfq; (GenBank) RNA-binding protein Hfq K03666 hfq; host factor-I protein D ROLI_018560 trpE; (GenBank) Anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D ROLI_018530 carA_2; (GenBank) Carbamoyl-phosphate synthase small chain K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D ROLI_020620 aroH; (GenBank) Phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D ROLI_014070 hypothetical protein K20527 trbB; type IV secretion system protein TrbB [EC:7.4.2.8] D ROLI_038240 hypothetical protein K20527 trbB; type IV secretion system protein TrbB [EC:7.4.2.8] D ROLI_014060 hypothetical protein K20528 trbC; type IV secretion system protein TrbC D ROLI_038230 hypothetical protein K20528 trbC; type IV secretion system protein TrbC D ROLI_014050 hypothetical protein K20529 trbD; type IV secretion system protein TrbD D ROLI_038220 hypothetical protein K20529 trbD; type IV secretion system protein TrbD D ROLI_014040 hypothetical protein K20530 trbE; type IV secretion system protein TrbE [EC:7.4.2.8] D ROLI_038210 virB4_1; (GenBank) Type IV secretion system protein virB4 K20530 trbE; type IV secretion system protein TrbE [EC:7.4.2.8] D ROLI_038200 hypothetical protein K20266 trbJ; type IV secretion system protein TrbJ D ROLI_014620 hypothetical protein K07344 trbL; type IV secretion system protein TrbL D ROLI_038180 hypothetical protein K07344 trbL; type IV secretion system protein TrbL D ROLI_014030 hypothetical protein K20531 trbF; type IV secretion system protein TrbF D ROLI_014610 hypothetical protein K20531 trbF; type IV secretion system protein TrbF D ROLI_038170 hypothetical protein K20531 trbF; type IV secretion system protein TrbF D ROLI_014600 hypothetical protein K20532 trbG; type IV secretion system protein TrbG D ROLI_038160 hypothetical protein K20532 trbG; type IV secretion system protein TrbG D ROLI_014020 hypothetical protein K20533 trbI; type IV secretion system protein TrbI D ROLI_014590 hypothetical protein K20533 trbI; type IV secretion system protein TrbI D ROLI_038150 hypothetical protein K20533 trbI; type IV secretion system protein TrbI D ROLI_006740 hypothetical protein K20249 raiI; acyl homoserine lactone synthase [EC:2.3.1.184] D ROLI_006730 vjbR; (GenBank) HTH-type quorum sensing-dependent transcriptional regulator VjbR K25873 raiR; LuxR family transcriptional regulator, quorum-sensing system regulator RaiR D ROLI_000520 hypothetical protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D ROLI_000490 hypothetical protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D ROLI_000500 hypothetical protein K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D ROLI_000530 btuD_1; (GenBank) Vitamin B12 import ATP-binding protein BtuD K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D ROLI_000790 hypothetical protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D ROLI_017520 braC_1; (GenBank) Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D ROLI_017780 hypothetical protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D ROLI_020590 hypothetical protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D ROLI_026730 braC_2; (GenBank) Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D ROLI_039640 Leu/Ile/Val-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D ROLI_000760 livH_1; (GenBank) High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein D ROLI_017530 livH_2; (GenBank) High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein D ROLI_017770 livH_3; (GenBank) High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein D ROLI_020540 livH_4; (GenBank) High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein D ROLI_026750 livH_5; (GenBank) High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein D ROLI_039620 livH_7; (GenBank) High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein D ROLI_000780 hypothetical protein K01998 livM; branched-chain amino acid transport system permease protein D ROLI_017540 hypothetical protein K01998 livM; branched-chain amino acid transport system permease protein D ROLI_020530 hypothetical protein K01998 livM; branched-chain amino acid transport system permease protein D ROLI_026720 btuD_4; (GenBank) Vitamin B12 import ATP-binding protein BtuD K01995 livG; branched-chain amino acid transport system ATP-binding protein D ROLI_039630 hypothetical protein K01998 livM; branched-chain amino acid transport system permease protein D ROLI_000740 cysA_1; (GenBank) Sulfate/thiosulfate import ATP-binding protein CysA K01995 livG; branched-chain amino acid transport system ATP-binding protein D ROLI_017550 cysA_2; (GenBank) Sulfate/thiosulfate import ATP-binding protein CysA K01995 livG; branched-chain amino acid transport system ATP-binding protein D ROLI_017750 metN; (GenBank) Methionine import ATP-binding protein MetN K01995 livG; branched-chain amino acid transport system ATP-binding protein D ROLI_020580 lptB_1; (GenBank) Lipopolysaccharide export system ATP-binding protein LptB K01995 livG; branched-chain amino acid transport system ATP-binding protein D ROLI_039600 lptB_3; (GenBank) Lipopolysaccharide export system ATP-binding protein LptB K01995 livG; branched-chain amino acid transport system ATP-binding protein D ROLI_000800 livF_1; (GenBank) High-affinity branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein D ROLI_017560 livF_2; (GenBank) High-affinity branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein D ROLI_017740 livF_3; (GenBank) High-affinity branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein D ROLI_020560 livF_4; (GenBank) High-affinity branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein D ROLI_026740 livF_5; (GenBank) High-affinity branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein D ROLI_000720 Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D ROLI_005600 crp_1; (GenBank) CRP-like cAMP-activated global transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D ROLI_017600 zur; (GenBank) Zinc uptake regulation protein K09823 zur; Fur family transcriptional regulator, zinc uptake regulator D ROLI_037410 ribA; (GenBank) GTP cyclohydrolase-2 K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D ROLI_024810 ribD; (GenBank) Riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D ROLI_028900 hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D ROLI_009040 hypothetical protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D ROLI_011860 appA; (GenBank) Oligopeptide-binding protein AppA K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D ROLI_014430 hypothetical protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D ROLI_021510 hypothetical protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D ROLI_027060 gsiB_1; (GenBank) Glutathione-binding protein GsiB K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D ROLI_031620 agpA; (GenBank) Periplasmic alpha-galactoside-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D ROLI_035120 ddpA; (GenBank) putative D,D-dipeptide-binding periplasmic protein DdpA K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D ROLI_036810 hypothetical protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D ROLI_040480 gsiB_2; (GenBank) Glutathione-binding protein GsiB K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D ROLI_040490 dppA_1; (GenBank) Periplasmic dipeptide transport protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D ROLI_040720 hbpA; (GenBank) Heme-binding protein A K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D ROLI_042750 dppA_2; (GenBank) Periplasmic dipeptide transport protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D ROLI_043520 sgrR; (GenBank) HTH-type transcriptional regulator SgrR K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D ROLI_009030 gsiC_1; (GenBank) Glutathione transport system permease protein GsiC K02033 ABC.PE.P; peptide/nickel transport system permease protein D ROLI_011850 dppB_1; (GenBank) Dipeptide transport system permease protein DppB K02033 ABC.PE.P; peptide/nickel transport system permease protein D ROLI_023470 hypothetical protein K02033 ABC.PE.P; peptide/nickel transport system permease protein D ROLI_027050 dppB_2; (GenBank) Dipeptide transport system permease protein DppB K02033 ABC.PE.P; peptide/nickel transport system permease protein D ROLI_031630 dppB_3; (GenBank) Dipeptide transport system permease protein DppB K02033 ABC.PE.P; peptide/nickel transport system permease protein D ROLI_035110 ddpB; (GenBank) putative D,D-dipeptide transport system permease protein DdpB K02033 ABC.PE.P; peptide/nickel transport system permease protein D ROLI_040470 gsiC_3; (GenBank) Glutathione transport system permease protein GsiC K02033 ABC.PE.P; peptide/nickel transport system permease protein D ROLI_040750 gsiC_4; (GenBank) Glutathione transport system permease protein GsiC K02033 ABC.PE.P; peptide/nickel transport system permease protein D ROLI_042760 dppB_4; (GenBank) Dipeptide transport system permease protein DppB K02033 ABC.PE.P; peptide/nickel transport system permease protein D ROLI_009020 gsiD_1; (GenBank) Glutathione transport system permease protein GsiD K02034 ABC.PE.P1; peptide/nickel transport system permease protein D ROLI_011840 oppC; (GenBank) Oligopeptide transport system permease protein OppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein D ROLI_014450 gsiD_2; (GenBank) Glutathione transport system permease protein GsiD K02034 ABC.PE.P1; peptide/nickel transport system permease protein D ROLI_023480 hypothetical protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein D ROLI_027040 dppC; (GenBank) Dipeptide transport system permease protein DppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein D ROLI_031640 hypothetical protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein D ROLI_035100 ddpC; (GenBank) putative D,D-dipeptide transport system permease protein DdpC K02034 ABC.PE.P1; peptide/nickel transport system permease protein D ROLI_040460 gsiD_3; (GenBank) Glutathione transport system permease protein GsiD K02034 ABC.PE.P1; peptide/nickel transport system permease protein D ROLI_040760 gsiD_4; (GenBank) Glutathione transport system permease protein GsiD K02034 ABC.PE.P1; peptide/nickel transport system permease protein D ROLI_042770 gsiD_5; (GenBank) Glutathione transport system permease protein GsiD K02034 ABC.PE.P1; peptide/nickel transport system permease protein D ROLI_009010 gsiA_1; (GenBank) Glutathione import ATP-binding protein GsiA K02031 ddpD; peptide/nickel transport system ATP-binding protein D ROLI_011870 gsiA_2; (GenBank) Glutathione import ATP-binding protein GsiA K02031 ddpD; peptide/nickel transport system ATP-binding protein D ROLI_014460 oppD_1; (GenBank) Oligopeptide transport ATP-binding protein OppD K02031 ddpD; peptide/nickel transport system ATP-binding protein D ROLI_023490 gsiA_3; (GenBank) Glutathione import ATP-binding protein GsiA K02031 ddpD; peptide/nickel transport system ATP-binding protein D ROLI_027030 gsiA_4; (GenBank) Glutathione import ATP-binding protein GsiA K02031 ddpD; peptide/nickel transport system ATP-binding protein D ROLI_031610 gsiA_5; (GenBank) Glutathione import ATP-binding protein GsiA K02031 ddpD; peptide/nickel transport system ATP-binding protein D ROLI_035090 oppD_2; (GenBank) Oligopeptide transport ATP-binding protein OppD K02031 ddpD; peptide/nickel transport system ATP-binding protein D ROLI_040440 oppD_3; (GenBank) Oligopeptide transport ATP-binding protein OppD K02031 ddpD; peptide/nickel transport system ATP-binding protein D ROLI_040770 gsiA_6; (GenBank) Glutathione import ATP-binding protein GsiA K02031 ddpD; peptide/nickel transport system ATP-binding protein D ROLI_042780 oppD_4; (GenBank) Oligopeptide transport ATP-binding protein OppD K02031 ddpD; peptide/nickel transport system ATP-binding protein D ROLI_014470 oppF_1; (GenBank) Oligopeptide transport ATP-binding protein OppF K02032 ddpF; peptide/nickel transport system ATP-binding protein D ROLI_035080 oppF_2; (GenBank) Oligopeptide transport ATP-binding protein OppF K02032 ddpF; peptide/nickel transport system ATP-binding protein D ROLI_040430 btuD_6; (GenBank) Vitamin B12 import ATP-binding protein BtuD K02032 ddpF; peptide/nickel transport system ATP-binding protein D ROLI_042790 oppF_3; (GenBank) Oligopeptide transport ATP-binding protein OppF K02032 ddpF; peptide/nickel transport system ATP-binding protein D ROLI_033870 yidC; (GenBank) Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D ROLI_035540 secE; (GenBank) Protein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D ROLI_008180 hypothetical protein K03075 secG; preprotein translocase subunit SecG D ROLI_034090 secY; (GenBank) Protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D ROLI_028020 yajC; (GenBank) Sec translocon accessory complex subunit YajC K03210 yajC; preprotein translocase subunit YajC D ROLI_043430 secA; (GenBank) Protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D ROLI_008440 ftsY; (GenBank) Signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor D ROLI_043970 secB; (GenBank) Protein-export protein SecB K03071 secB; preprotein translocase subunit SecB D ROLI_036600 ffh; (GenBank) Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis [PATH:rfu02030] D ROLI_000130 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D ROLI_014810 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D ROLI_015890 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D ROLI_042480 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D ROLI_048350 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D ROLI_000170 hypothetical protein K10439 rbsB; ribose transport system substrate-binding protein D ROLI_003620 hypothetical protein K10439 rbsB; ribose transport system substrate-binding protein D ROLI_013420 xypA; (GenBank) Xylitol-binding protein K10439 rbsB; ribose transport system substrate-binding protein D ROLI_015880 hypothetical protein K10439 rbsB; ribose transport system substrate-binding protein D ROLI_022090 cheA; (GenBank) Chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D ROLI_022100 cheW; (GenBank) Chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D ROLI_022080 cheY_1; (GenBank) Chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D ROLI_022120 cheY_2; (GenBank) Chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D ROLI_030120 hypothetical protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D ROLI_010530 cheB2; (GenBank) Protein-glutamate methylesterase/protein-glutamine glutaminase 2 K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D ROLI_019650 cheB_2; (GenBank) Protein-glutamate methylesterase/protein-glutamine glutaminase K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61] D ROLI_010540 cheD; (GenBank) Chemoreceptor glutamine deamidase CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D ROLI_022110 cheR; (GenBank) Chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D ROLI_027880 fliG; (GenBank) Flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D ROLI_017830 hypothetical protein K02416 fliM; flagellar motor switch protein FliM D ROLI_038590 hypothetical protein K02417 fliN; flagellar motor switch protein FliN D ROLI_038650 motA; (GenBank) Motility protein A K02556 motA; chemotaxis protein MotA D ROLI_038900 motB; (GenBank) Motility protein B K02557 motB; chemotaxis protein MotB C 02040 Flagellar assembly [PATH:rfu02040] D ROLI_038050 fliE; (GenBank) Flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE D ROLI_038610 fliF; (GenBank) Flagellar M-ring protein K02409 fliF; flagellar M-ring protein FliF D ROLI_027880 fliG; (GenBank) Flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D ROLI_038020 fliI; (GenBank) Flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D ROLI_000660 hypothetical protein K02414 fliK; flagellar hook-length control protein FliK D ROLI_038110 hypothetical protein K02415 fliL; flagellar protein FliL D ROLI_038620 hypothetical protein K02415 fliL; flagellar protein FliL D ROLI_017830 hypothetical protein K02416 fliM; flagellar motor switch protein FliM D ROLI_038590 hypothetical protein K02417 fliN; flagellar motor switch protein FliN D ROLI_038580 fliP; (GenBank) Flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D ROLI_038060 hypothetical protein K02420 fliQ; flagellar biosynthesis protein FliQ D ROLI_034350 hypothetical protein K02421 fliR; flagellar biosynthesis protein FliR D ROLI_034340 flhA_2; (GenBank) Flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D ROLI_034360 flhB; (GenBank) Flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D ROLI_038090 hypothetical protein K02386 flgA; flagellar basal body P-ring formation protein FlgA D ROLI_038030 hypothetical protein K02387 flgB; flagellar basal-body rod protein FlgB D ROLI_038040 flgC; (GenBank) Flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D ROLI_000650 hypothetical protein K02389 flgD; flagellar basal-body rod modification protein FlgD D ROLI_038910 flgE; (GenBank) Flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE D ROLI_038070 flgG_1; (GenBank) Flagellar basal-body rod protein FlgG K02391 flgF; flagellar basal-body rod protein FlgF D ROLI_038080 flgG_2; (GenBank) Flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D ROLI_038100 flgH; (GenBank) Flagellar L-ring protein K02393 flgH; flagellar L-ring protein FlgH D ROLI_038940 flgI; (GenBank) Flagellar P-ring protein K02394 flgI; flagellar P-ring protein FlgI D ROLI_000670 hypothetical protein K02395 flgJ; peptidoglycan hydrolase FlgJ D ROLI_038920 flgK; (GenBank) Flagellar hook-associated protein 1 K02396 flgK; flagellar hook-associated protein 1 D ROLI_038930 hypothetical protein K02397 flgL; flagellar hook-associated protein 3 FlgL D ROLI_000690 hypothetical protein K02406 fliC; flagellin D ROLI_038650 motA; (GenBank) Motility protein A K02556 motA; chemotaxis protein MotA D ROLI_038900 motB; (GenBank) Motility protein B K02557 motB; chemotaxis protein MotB D ROLI_024860 rpoD; (GenBank) RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D ROLI_019260 eno; (GenBank) Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04981 Folate transport and metabolism [PATH:rfu04981] D ROLI_009350 hypothetical protein K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] D ROLI_001130 glyA2_1; (GenBank) Serine hydroxymethyltransferase 2 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D ROLI_032670 glyA2_2; (GenBank) Serine hydroxymethyltransferase 2 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D ROLI_022060 hypothetical protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D ROLI_023900 metH_1; (GenBank) Methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] C 04980 Cobalamin transport and metabolism [PATH:rfu04980] D ROLI_005020 Corrinoid adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D ROLI_030520 argK; (GenBank) GTPase ArgK K07588 MMAA; GTPase [EC:3.6.5.-] D ROLI_029040 mcm; (GenBank) Methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D ROLI_022060 hypothetical protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D ROLI_023900 metH_1; (GenBank) Methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation C 04382 Cornified envelope formation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:rfu01501] D ROLI_037440 opmA; (GenBank) Porin K08720 ompU; outer membrane protein OmpU D ROLI_019010 nagZ; (GenBank) Beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D ROLI_004500 bepE; (GenBank) Efflux pump membrane transporter BepE K18138 acrB; multidrug efflux pump D ROLI_035940 bepG; (GenBank) Efflux pump membrane transporter BepG K18138 acrB; multidrug efflux pump D ROLI_025390 bepC_2; (GenBank) Outer membrane efflux protein BepC K12340 tolC; outer membrane protein D ROLI_022740 mrcA; (GenBank) Penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D ROLI_036030 mrdA; (GenBank) Peptidoglycan D,D-transpeptidase MrdA K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D ROLI_011420 ftsI; (GenBank) putative peptidoglycan D,D-transpeptidase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:rfu01502] D ROLI_011530 ddlB; (GenBank) D-alanine--D-alanine ligase B K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D ROLI_012800 alr; (GenBank) Alanine racemase, biosynthetic K01775 alr; alanine racemase [EC:5.1.1.1] D ROLI_011440 murF; (GenBank) UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D ROLI_011450 mraY; (GenBank) Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D ROLI_011490 murG_1; (GenBank) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:rfu01503] D ROLI_039650 hypothetical protein K01406 prtC; serralysin [EC:3.4.24.40] D ROLI_022750 amiC_1; (GenBank) N-acetylmuramoyl-L-alanine amidase AmiC K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D ROLI_008350 degP; (GenBank) Periplasmic serine endoprotease DegP K04771 degP; serine protease Do [EC:3.4.21.107] D ROLI_004500 bepE; (GenBank) Efflux pump membrane transporter BepE K18138 acrB; multidrug efflux pump D ROLI_035940 bepG; (GenBank) Efflux pump membrane transporter BepG K18138 acrB; multidrug efflux pump D ROLI_025390 bepC_2; (GenBank) Outer membrane efflux protein BepC K12340 tolC; outer membrane protein D ROLI_023340 lpxA; (GenBank) Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:rfu01000] C 01001 Protein kinases [BR:rfu01001] D ROLI_003430 rsbW; (GenBank) Serine-protein kinase RsbW K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] D ROLI_044430 hypothetical protein K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3] D ROLI_045200 hypothetical protein K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3] D ROLI_020680 rcsC_2; (GenBank) Sensor histidine kinase RcsC K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D ROLI_024350 envZ; (GenBank) Osmolarity sensor protein EnvZ K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D ROLI_004920 sasA_1; (GenBank) Adaptive-response sensory-kinase SasA K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3] D ROLI_022570 hypothetical protein K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3] D ROLI_021720 glnL; (GenBank) Sensory histidine kinase/phosphatase NtrB K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D ROLI_021700 sasA_8; (GenBank) Adaptive-response sensory-kinase SasA K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D ROLI_023850 dctB; (GenBank) C4-dicarboxylate transport sensor protein DctB K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3] D ROLI_022090 cheA; (GenBank) Chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D ROLI_021230 rcsC_3; (GenBank) Sensor histidine kinase RcsC K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3] D ROLI_044130 regB; (GenBank) Sensor histidine kinase RegB K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:rfu01009] D ROLI_044180 ahcY; (GenBank) Adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D ROLI_000330 hypothetical protein K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 01002 Peptidases and inhibitors [BR:rfu01002] D ROLI_003900 lspA; (GenBank) Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] D ROLI_026080 hypothetical protein K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43] D ROLI_021880 guaA; (GenBank) GMP synthase [glutamine-hydrolyzing] K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D ROLI_011760 puuD; (GenBank) Gamma-glutamyl-gamma-aminobutyrate hydrolase PuuD K07010 K07010; putative glutamine amidotransferase D ROLI_012730 purF_1; (GenBank) Amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D ROLI_005170 gltB; (GenBank) Glutamate synthase [NADPH] large chain K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D ROLI_010070 glmS; (GenBank) Glutamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D ROLI_011950 nodM; (GenBank) Glutamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D ROLI_044540 hypothetical protein K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D ROLI_043610 hypothetical protein K16291 erfK; L,D-transpeptidase ErfK/SrfK D ROLI_020470 hypothetical protein K21470 ycbB; L,D-transpeptidase YcbB D ROLI_039900 hypothetical protein K07052 K07052; CAAX protease family protein D ROLI_011720 pepN; (GenBank) Aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D ROLI_036060 dcp; (GenBank) Dipeptidyl carboxypeptidase K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5] D ROLI_024640 pepF1; (GenBank) Oligoendopeptidase F, plasmid K08602 pepF; oligoendopeptidase F [EC:3.4.24.-] D ROLI_039650 hypothetical protein K01406 prtC; serralysin [EC:3.4.24.40] D ROLI_003920 putative zinc protease K07263 pqqL; zinc protease [EC:3.4.24.-] D ROLI_003930 hypothetical protein K07263 pqqL; zinc protease [EC:3.4.24.-] D ROLI_019510 pepA_1; (GenBank) Cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D ROLI_039750 pepA_2; (GenBank) putative cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D ROLI_035130 hypothetical protein K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D ROLI_040110 hypothetical protein K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D ROLI_000430 dapE_1; (GenBank) Succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D ROLI_040710 dapE_3; (GenBank) Succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D ROLI_001950 map; (GenBank) Methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D ROLI_011620 hypothetical protein K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D ROLI_013390 dddP_1; (GenBank) Dimethlysulfonioproprionate lyase DddP K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D ROLI_021400 Thermostable carboxypeptidase 1 K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19] D ROLI_026170 ftsH_2; (GenBank) ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D ROLI_016220 ysdC; (GenBank) Putative aminopeptidase YsdC K20609 sgcX; putative aminopeptidase [EC:3.4.11.-] D ROLI_023390 rseP; (GenBank) Regulator of sigma-E protease RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D ROLI_043300 mepA_3; (GenBank) Penicillin-insensitive murein endopeptidase K07261 mepA; penicillin-insensitive murein DD-endopeptidase [EC:3.4.24.-] D ROLI_008350 degP; (GenBank) Periplasmic serine endoprotease DegP K04771 degP; serine protease Do [EC:3.4.21.107] D ROLI_010310 dacC; (GenBank) D-alanyl-D-alanine carboxypeptidase DacC K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D ROLI_034510 hypothetical protein K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D ROLI_017640 clpP; (GenBank) ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D ROLI_022960 lon; (GenBank) Lon protease K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D ROLI_018470 lexA; (GenBank) LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88] D ROLI_004790 lepB; (GenBank) Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D ROLI_043530 pip; (GenBank) Proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5] D ROLI_039940 hypothetical protein K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D ROLI_021610 quiP; (GenBank) Acyl-homoserine lactone acylase QuiP K01434 pac; penicillin G amidase [EC:3.5.1.11] D ROLI_014720 hypothetical protein K07059 rho2; rhomboid family protease [EC:3.4.21.105] D ROLI_028680 hypothetical protein K06904 GP4; Escherichia/Staphylococcus phage prohead protease D ROLI_044050 hslV; (GenBank) ATP-dependent protease subunit HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] D ROLI_003420 ywrD_1; (GenBank) Glutathione hydrolase-like YwrD proenzyme K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D ROLI_032940 ggt; (GenBank) Glutathione hydrolase proenzyme K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D ROLI_035000 ywrD_2; (GenBank) Glutathione hydrolase-like YwrD proenzyme K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D ROLI_037580 pmbA; (GenBank) Metalloprotease PmbA K03592 pmbA; PmbA protein D ROLI_025910 tldD; (GenBank) Metalloprotease TldD K03568 tldD; TldD protein D ROLI_008330 hflC; (GenBank) Modulator of FtsH protease HflC K04087 hflC; modulator of FtsH protease HflC D ROLI_008320 hflK; (GenBank) Modulator of FtsH protease HflK K04088 hflK; modulator of FtsH protease HflK C 01003 Glycosyltransferases [BR:rfu01003] D ROLI_046070 ppm1; (GenBank) Polyprenol monophosphomannose synthase K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83] D ROLI_017240 glgA1; (GenBank) Glycogen synthase 1 K00703 glgA; starch synthase [EC:2.4.1.21] D ROLI_005180 mtgA_2; (GenBank) Biosynthetic peptidoglycan transglycosylase K03814 mtgA; peptidoglycan glycosyltransferase [EC:2.4.99.28] D ROLI_022740 mrcA; (GenBank) Penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D ROLI_011480 ftsW; (GenBank) putative peptidoglycan glycosyltransferase FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28] D ROLI_036040 mrdB; (GenBank) Peptidoglycan glycosyltransferase MrdB K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28] D ROLI_030650 opgH; (GenBank) Glucans biosynthesis glucosyltransferase H K03669 mdoH; membrane glycosyltransferase [EC:2.4.1.-] C 01005 Lipopolysaccharide biosynthesis proteins [BR:rfu01005] D ROLI_023340 lpxA; (GenBank) Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D ROLI_023320 lpxB; (GenBank) Lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D ROLI_011570 lpxC; (GenBank) UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D ROLI_020480 lpxD; (GenBank) UDP-3-O-acylglucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D ROLI_023330 lpxI; (GenBank) UDP-2,3-diacylglucosamine pyrophosphatase LpxI K09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D ROLI_037620 lpxK; (GenBank) Tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D ROLI_003110 lpxL; (GenBank) Lipid A biosynthesis lauroyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D ROLI_011920 waaA; (GenBank) 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D ROLI_037610 hypothetical protein K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D ROLI_030720 kdsA; (GenBank) 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D ROLI_043370 kdsB; (GenBank) 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D ROLI_043250 kdsD; (GenBank) Arabinose 5-phosphate isomerase KdsD K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D ROLI_011910 mshA_3; (GenBank) D-inositol-3-phosphate glycosyltransferase K12989 lpcC; mannosyltransferase [EC:2.4.1.-] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:rfu01011] D ROLI_006100 murA; (GenBank) UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D ROLI_011520 murB; (GenBank) UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D ROLI_011500 murC; (GenBank) UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D ROLI_011460 murD; (GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D ROLI_011430 murE; (GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D ROLI_011530 ddlB; (GenBank) D-alanine--D-alanine ligase B K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D ROLI_012800 alr; (GenBank) Alanine racemase, biosynthetic K01775 alr; alanine racemase [EC:5.1.1.1] D ROLI_018360 murI; (GenBank) Glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D ROLI_011450 mraY; (GenBank) Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D ROLI_011490 murG_1; (GenBank) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D ROLI_005130 uppP; (GenBank) Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D ROLI_036210 murJ; (GenBank) putative lipid II flippase MurJ K03980 murJ; putative peptidoglycan lipid II flippase D ROLI_022740 mrcA; (GenBank) Penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D ROLI_036030 mrdA; (GenBank) Peptidoglycan D,D-transpeptidase MrdA K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D ROLI_011420 ftsI; (GenBank) putative peptidoglycan D,D-transpeptidase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D ROLI_010310 dacC; (GenBank) D-alanyl-D-alanine carboxypeptidase DacC K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D ROLI_034510 hypothetical protein K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D ROLI_005180 mtgA_2; (GenBank) Biosynthetic peptidoglycan transglycosylase K03814 mtgA; peptidoglycan glycosyltransferase [EC:2.4.99.28] D ROLI_011480 ftsW; (GenBank) putative peptidoglycan glycosyltransferase FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28] D ROLI_036040 mrdB; (GenBank) Peptidoglycan glycosyltransferase MrdB K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28] D ROLI_043610 hypothetical protein K16291 erfK; L,D-transpeptidase ErfK/SrfK D ROLI_020470 hypothetical protein K21470 ycbB; L,D-transpeptidase YcbB D ROLI_043300 mepA_3; (GenBank) Penicillin-insensitive murein endopeptidase K07261 mepA; penicillin-insensitive murein DD-endopeptidase [EC:3.4.24.-] D ROLI_039450 hypothetical protein K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D ROLI_044000 hypothetical protein K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29] D ROLI_000480 hypothetical protein K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29] D ROLI_028730 mltG; (GenBank) Endolytic murein transglycosylase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D ROLI_022750 amiC_1; (GenBank) N-acetylmuramoyl-L-alanine amidase AmiC K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] C 01004 Lipid biosynthesis proteins [BR:rfu01004] D ROLI_028780 fabD; (GenBank) Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D ROLI_019080 fabH; (GenBank) 3-oxoacyl-[acyl-carrier-protein] synthase 3 K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D ROLI_032090 fabB; (GenBank) 3-oxoacyl-[acyl-carrier-protein] synthase 1 K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D ROLI_028740 fabF_2; (GenBank) 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D ROLI_012550 fabG_2; (GenBank) 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D ROLI_028770 fabG_3; (GenBank) 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D ROLI_040790 tsaC1; (GenBank) 4-formylbenzenesulfonate dehydrogenase TsaC1/TsaC2 K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D ROLI_032080 fabA; (GenBank) 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14] D ROLI_023350 fabZ; (GenBank) 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D ROLI_018610 fabI_1; (GenBank) Enoyl-[acyl-carrier-protein] reductase [NADH] FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D ROLI_032100 fabI_2; (GenBank) Enoyl-[acyl-carrier-protein] reductase [NADH] FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D ROLI_035790 tesA; (GenBank) Esterase TesA K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D ROLI_005990 putative acyl-CoA thioester hydrolase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-] D ROLI_002860 des; (GenBank) Fatty acid desaturase K10255 FAD6; acyl-lipid omega-6 desaturase (Delta-12 desaturase) [EC:1.14.19.23 1.14.19.45] D ROLI_028390 acsA_1; (GenBank) Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D ROLI_032630 acsA_2; (GenBank) Acetyl-coenzyme A synthetase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17] D ROLI_000720 Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D ROLI_008940 lcfB_1; (GenBank) Long-chain-fatty-acid--CoA ligase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-] D ROLI_031470 fadD3; (GenBank) 3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl:CoA ligase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-] D ROLI_019090 plsX; (GenBank) Phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D ROLI_031140 plsY; (GenBank) Glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D ROLI_007720 hypothetical protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D ROLI_009550 hypothetical protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins [BR:rfu01008] D ROLI_017290 hypothetical protein K21162 sgcE4; enediyne biosynthesis protein E4 D ROLI_027710 Aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] C 01006 Prenyltransferases [BR:rfu01006] D ROLI_005400 ispA; (GenBank) Farnesyl diphosphate synthase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] D ROLI_040970 Farnesyl diphosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D ROLI_006910 ispB; (GenBank) Octaprenyl diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D ROLI_023420 ispU; (GenBank) Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D ROLI_002680 hypothetical protein K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32] D ROLI_023450 miaA; (GenBank) tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D ROLI_034690 ubiA; (GenBank) 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D ROLI_025890 ctaB; (GenBank) Protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D ROLI_002440 menA; (GenBank) 1,4-dihydroxy-2-naphthoate octaprenyltransferase K04040 chlG; chlorophyll/bacteriochlorophyll a synthase [EC:2.5.1.62 2.5.1.133] C 01007 Amino acid related enzymes [BR:rfu01007] D ROLI_034490 lysS; (GenBank) Lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6] D ROLI_018450 gltX_1; (GenBank) Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D ROLI_035870 gltX1; (GenBank) Glutamate--tRNA ligase 1 K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D ROLI_023230 gltX_2; (GenBank) Glutamate--tRNA ligase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D ROLI_019170 tyrS; (GenBank) Tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D ROLI_036230 trpS; (GenBank) Tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D ROLI_018760 cysS; (GenBank) Cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D ROLI_018990 argS; (GenBank) Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D ROLI_014820 metG; (GenBank) Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D ROLI_026430 ileS; (GenBank) Isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D ROLI_025270 hypothetical protein K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D ROLI_037460 leuS; (GenBank) Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D ROLI_036310 aspS; (GenBank) Aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D ROLI_033730 hisS; (GenBank) Histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D ROLI_008560 glyQ; (GenBank) Glycine--tRNA ligase alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D ROLI_008580 hypothetical protein K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D ROLI_012920 serS; (GenBank) Serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D ROLI_028950 proS; (GenBank) Proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D ROLI_006410 thrS; (GenBank) Threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D ROLI_021210 alaS; (GenBank) Alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D ROLI_003160 pheS; (GenBank) Phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D ROLI_003190 pheT; (GenBank) Phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D ROLI_006320 Aspartate/prephenate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D ROLI_001800 tyrB; (GenBank) Aromatic-amino-acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D ROLI_018750 aruH; (GenBank) Arginine--pyruvate transaminase AruH K12252 aruH; arginine:pyruvate transaminase [EC:2.6.1.84] D ROLI_025300 hisC_2; (GenBank) Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D ROLI_035620 hisC_3; (GenBank) Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D ROLI_001970 hemA_1; (GenBank) 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37] D ROLI_002600 hemA_2; (GenBank) 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37] D ROLI_022810 hemA_3; (GenBank) 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37] D ROLI_004440 patB; (GenBank) Cystathionine beta-lyase PatB K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D ROLI_030560 argD_2; (GenBank) Acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D ROLI_040550 davT; (GenBank) 5-aminovalerate aminotransferase DavT K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D ROLI_000540 spuC_1; (GenBank) Putrescine--pyruvate aminotransferase K12256 spuC; putrescine---pyruvate transaminase [EC:2.6.1.113] D ROLI_002810 hpa_tpa; (GenBank) Hypotaurine/taurine--pyruvate aminotransferase K03851 tpa; taurine-pyruvate aminotransferase [EC:2.6.1.77] D ROLI_003050 dat; (GenBank) D-alanine aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21] D ROLI_005440 ilvE_1; (GenBank) Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D ROLI_015260 ilvE_2; (GenBank) Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D ROLI_030800 ilvE_3; (GenBank) Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D ROLI_015200 sgaA_1; (GenBank) Serine--glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D ROLI_025320 sgaA_3; (GenBank) Serine--glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D ROLI_028300 sgaA_4; (GenBank) Serine--glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D ROLI_044980 serC; (GenBank) Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:rfu00194] D ROLI_007110 atpC; (GenBank) ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D ROLI_007100 atpD; (GenBank) ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D ROLI_007090 atpG_1; (GenBank) ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D ROLI_007080 atpA; (GenBank) ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D ROLI_007070 atpH; (GenBank) ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D ROLI_036470 atpF; (GenBank) ATP synthase subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b D ROLI_036480 atpG_2; (GenBank) ATP synthase subunit b' K02109 ATPF0B; F-type H+-transporting ATPase subunit b D ROLI_036490 atpE; (GenBank) ATP synthase subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c D ROLI_036500 atpB; (GenBank) ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a D ROLI_036510 atpI; (GenBank) ATP synthase protein I K02116 atpI; ATP synthase protein I D ROLI_040850 pufL; (GenBank) Reaction center protein L chain K08928 pufL; photosynthetic reaction center L subunit D ROLI_040840 pufM; (GenBank) Reaction center protein M chain K08929 pufM; photosynthetic reaction center M subunit D ROLI_002540 puhA; (GenBank) Reaction center protein H chain K13991 puhA; photosynthetic reaction center H subunit D ROLI_040830 pufC; (GenBank) Photosynthetic reaction center cytochrome c subunit K13992 pufC; photosynthetic reaction center cytochrome c subunit D ROLI_040860 pufA; (GenBank) Light-harvesting protein B-875 alpha chain K08926 pufA; light-harvesting complex 1 alpha chain D ROLI_040870 pufB; (GenBank) Light-harvesting protein B-875 beta chain K08927 pufB; light-harvesting complex 1 beta chain D ROLI_021960 pucB; (GenBank) Light-harvesting protein B-800/850 beta chain K08939 pucB; light-harvesting protein B-800-850 beta chain B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:rfu03000] D ROLI_021280 hhaIM; (GenBank) Modification methylase HhaI K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D ROLI_033210 dcm; (GenBank) DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D ROLI_023460 hypothetical protein K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA D ROLI_039520 ada; (GenBank) Bifunctional transcriptional activator/DNA repair enzyme Ada K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] D ROLI_020610 cdhR_3; (GenBank) HTH-type transcriptional regulator CdhR K21826 gbdR; AraC family transcriptional regulator, glycine betaine-responsive activator D ROLI_005310 gcvA_1; (GenBank) Glycine cleavage system transcriptional activator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D ROLI_006960 gcvA_3; (GenBank) Glycine cleavage system transcriptional activator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D ROLI_032360 gcvA_4; (GenBank) Glycine cleavage system transcriptional activator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D ROLI_036520 gcvA_5; (GenBank) Glycine cleavage system transcriptional activator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D ROLI_046920 gcvA_6; (GenBank) Glycine cleavage system transcriptional activator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D ROLI_015810 gbpR; (GenBank) HTH-type transcriptional regulator GbpR K02623 pcaQ; LysR family transcriptional regulator, pca operon transcriptional activator D ROLI_025220 metR; (GenBank) HTH-type transcriptional regulator MetR K03576 metR; LysR family transcriptional regulator, regulator for metE and metH D ROLI_002320 nhaR; (GenBank) Transcriptional activator protein NhaR K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA D ROLI_034980 oxyR_1; (GenBank) Hydrogen peroxide-inducible genes activator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D ROLI_041160 oxyR_2; (GenBank) Hydrogen peroxide-inducible genes activator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D ROLI_029340 putative HTH-type transcriptional regulator K05596 argP; LysR family transcriptional regulator, arginine and lysine transport system/DNA replication regulator D ROLI_009680 yjiE_1; (GenBank) HTH-type transcriptional regulator YjiE K21645 hypT; LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT D ROLI_027690 yjiE_2; (GenBank) HTH-type transcriptional regulator YjiE K21645 hypT; LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT D ROLI_017010 glpR_1; (GenBank) Glycerol-3-phosphate regulon repressor K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor D ROLI_037900 glpR_2; (GenBank) Glycerol-3-phosphate regulon repressor K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor D ROLI_018000 srlR; (GenBank) Glucitol operon repressor K02530 lacR; DeoR family transcriptional regulator, lactose phosphotransferase system repressor D ROLI_009560 purR; (GenBank) HTH-type transcriptional repressor PurR K02529 galR; LacI family transcriptional regulator, galactose operon repressor D ROLI_015460 cytR; (GenBank) HTH-type transcriptional repressor CytR K02529 galR; LacI family transcriptional regulator, galactose operon repressor D ROLI_028490 rafR; (GenBank) HTH-type transcriptional regulator RafR K02529 galR; LacI family transcriptional regulator, galactose operon repressor D ROLI_043060 hypothetical protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor D ROLI_015850 gntR_1; (GenBank) HTH-type transcriptional regulator GntR K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor D ROLI_035270 gntR_2; (GenBank) HTH-type transcriptional regulator GntR K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor D ROLI_038550 gntR_3; (GenBank) HTH-type transcriptional regulator GntR K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor D ROLI_020870 mngR; (GenBank) Mannosyl-D-glycerate transport/metabolism system repressor MngR K02043 phnF; GntR family transcriptional regulator, phosphonate transport system regulatory protein D ROLI_010080 nagR_1; (GenBank) HTH-type transcriptional repressor NagR K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator D ROLI_010800 nagR_2; (GenBank) HTH-type transcriptional repressor NagR K03710 K03710; GntR family transcriptional regulator D ROLI_004350 pdhR_1; (GenBank) Pyruvate dehydrogenase complex repressor K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D ROLI_013330 tauR_1; (GenBank) HTH-type transcriptional regulator TauR K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D ROLI_039380 tauR_2; (GenBank) HTH-type transcriptional regulator TauR K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D ROLI_040070 tauR_3; (GenBank) HTH-type transcriptional regulator TauR K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D ROLI_047020 gabR; (GenBank) HTH-type transcriptional regulatory protein GabR K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D ROLI_027460 pdhR_3; (GenBank) Pyruvate dehydrogenase complex repressor K23466 tgnR; GntR family transcriptional regulator, trigonelline degradation regulator D ROLI_029310 betI_2; (GenBank) HTH-type transcriptional regulator BetI K02167 betI; TetR/AcrR family transcriptional regulator, transcriptional repressor of bet genes D ROLI_035740 rutR; (GenBank) HTH-type transcriptional regulator RutR K09017 rutR; TetR/AcrR family transcriptional regulator D ROLI_005490 hypothetical protein K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D ROLI_013950 hypothetical protein K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D ROLI_003000 lrp_1; (GenBank) Leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D ROLI_003240 lrp_2; (GenBank) Leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D ROLI_014750 lrp_5; (GenBank) Leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D ROLI_008670 lrp_4; (GenBank) Leucine-responsive regulatory protein K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator D ROLI_019890 decR_2; (GenBank) DNA-binding transcriptional activator DecR K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator D ROLI_021170 decR_3; (GenBank) DNA-binding transcriptional activator DecR K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator D ROLI_006730 vjbR; (GenBank) HTH-type quorum sensing-dependent transcriptional regulator VjbR K25873 raiR; LuxR family transcriptional regulator, quorum-sensing system regulator RaiR D ROLI_009740 hmrR_1; (GenBank) HTH-type transcriptional regulator HmrR K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D ROLI_044290 hmrR_2; (GenBank) HTH-type transcriptional regulator HmrR K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D ROLI_006870 soxR; (GenBank) Redox-sensitive transcriptional activator SoxR K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR D ROLI_019280 fur; (GenBank) Ferric uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D ROLI_017600 zur; (GenBank) Zinc uptake regulation protein K09823 zur; Fur family transcriptional regulator, zinc uptake regulator D ROLI_032070 hypothetical protein K09826 irr; Fur family transcriptional regulator, iron response regulator D ROLI_016880 iclR_1; (GenBank) Transcriptional repressor IclR K13641 iclR; IclR family transcriptional regulator, acetate operon repressor D ROLI_005600 crp_1; (GenBank) CRP-like cAMP-activated global transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D ROLI_026920 hypothetical protein K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D ROLI_037110 fixK; (GenBank) Nitrogen fixation regulation protein FixK K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D ROLI_041270 crp_2; (GenBank) CRP-like cAMP-activated global transcriptional regulator K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D ROLI_021110 iscR; (GenBank) HTH-type transcriptional regulator IscR K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor D ROLI_002290 nsrR; (GenBank) HTH-type transcriptional repressor NsrR K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor D ROLI_030700 hypothetical protein K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D ROLI_016410 arsC_2; (GenBank) Arsenate reductase K23988 arsR-arsC; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor / arsenate reductase (thioredoxin) [EC:1.20.4.4] D ROLI_041430 hypothetical protein K22042 hlyU; ArsR family transcriptional regulator, virulence genes transcriptional regulator D ROLI_036820 aroK_2; (GenBank) Shikimate kinase K15546 boxR; XRE family transcriptional regulator, aerobic/anaerobic benzoate catabolism transcriptional regulator D ROLI_029260 pccR_2; (GenBank) Propionyl-CoA carboxylase regulator K21686 prpR; XRE family transcriptional regulator, fatty acid utilization regulator D ROLI_015190 pccR_1; (GenBank) Propionyl-CoA carboxylase regulator K07110 ramB; XRE family transcriptional regulator, fatty acid utilization regulator D ROLI_017790 ramB; (GenBank) HTH-type transcriptional regulator RamB K07110 ramB; XRE family transcriptional regulator, fatty acid utilization regulator D ROLI_045030 sutR; (GenBank) HTH-type transcriptional regulator SutR K23779 sutR; XRE family transcriptional regulator, regulator of sulfur utilization D ROLI_012500 birA; (GenBank) Bifunctional ligase/repressor BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D ROLI_009520 acoR; (GenBank) Acetoin catabolism regulatory protein K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D ROLI_014740 putA; (GenBank) Bifunctional protein PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D ROLI_002260 hypothetical protein K19339 nosR; NosR/NirI family transcriptional regulator, nitrous oxide reductase regulator D ROLI_002090 hypothetical protein K19343 nirI; NosR/NirI family transcriptional regulator, nitrite reductase regulator D ROLI_006200 csoR_1; (GenBank) Copper-sensing transcriptional repressor CsoR K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor D ROLI_046420 csoR_2; (GenBank) Copper-sensing transcriptional repressor CsoR K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor D ROLI_011660 bolA; (GenBank) DNA-binding transcriptional regulator BolA K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator D ROLI_033610 hypothetical protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D ROLI_043860 parB; (GenBank) Chromosome-partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D ROLI_046230 parB; (GenBank) partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D ROLI_046320 noc_1; (GenBank) Nucleoid occlusion protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D ROLI_047230 repB; (GenBank) replicase RepA K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D ROLI_047300 noc_3; (GenBank) Nucleoid occlusion protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D ROLI_024540 carD; (GenBank) RNA polymerase-binding transcription factor CarD K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription D ROLI_043820 hrcA; (GenBank) Heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor D ROLI_039160 paaX; (GenBank) Transcriptional repressor PaaX K02616 paaX; phenylacetic acid degradation operon negative regulatory protein D ROLI_030250 hypothetical protein K07733 alpA; prophage regulatory protein D ROLI_005550 paiB; (GenBank) Protease synthase and sporulation protein PAI 2 K07734 paiB; transcriptional regulator D ROLI_031030 hypothetical protein K07735 algH; putative transcriptional regulator D ROLI_022310 dksA; (GenBank) RNA polymerase-binding transcription factor DksA K06204 dksA; RNA polymerase-binding transcription factor D ROLI_024820 nrdR; (GenBank) Transcriptional repressor NrdR K07738 nrdR; transcriptional repressor NrdR D ROLI_011390 mraZ; (GenBank) Transcriptional regulator MraZ K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:rfu03021] D ROLI_034040 rpoA; (GenBank) DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D ROLI_035480 rpoB; (GenBank) DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D ROLI_035470 rpoC; (GenBank) DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D ROLI_004730 rpoZ; (GenBank) DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D ROLI_024860 rpoD; (GenBank) RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D ROLI_004220 hypothetical protein K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D ROLI_040590 ecfG_2; (GenBank) ECF RNA polymerase sigma factor EcfG K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D ROLI_044390 ecfG_3; (GenBank) ECF RNA polymerase sigma factor EcfG K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D ROLI_044750 ecfG_4; (GenBank) ECF RNA polymerase sigma factor EcfG K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D ROLI_024660 rpoH_1; (GenBank) RNA polymerase sigma factor RpoH K03089 rpoH; RNA polymerase sigma-32 factor D ROLI_036110 rpoH_2; (GenBank) RNA polymerase sigma factor RpoH K03089 rpoH; RNA polymerase sigma-32 factor D ROLI_043500 nusA; (GenBank) Transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA D ROLI_024760 nusB; (GenBank) Transcription antitermination protein NusB K03625 nusB; transcription antitermination protein NusB D ROLI_035530 nusG; (GenBank) Transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D ROLI_043720 rcsC_7; (GenBank) Sensor histidine kinase RcsC K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3] D ROLI_003440 hypothetical protein K04749 rsbV; anti-sigma B factor antagonist D ROLI_003430 rsbW; (GenBank) Serine-protein kinase RsbW K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] D ROLI_022310 dksA; (GenBank) RNA polymerase-binding transcription factor DksA K06204 dksA; RNA polymerase-binding transcription factor D ROLI_006850 greA; (GenBank) Transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D ROLI_043910 rho; (GenBank) Transcription termination factor Rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:rfu03019] D ROLI_023830 rne; (GenBank) Ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] D ROLI_004800 rnc; (GenBank) Ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3] D ROLI_012520 rnj1; (GenBank) Ribonuclease J 1 K12574 rnj; ribonuclease J [EC:3.1.-.-] D ROLI_000460 rnr; (GenBank) Ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D ROLI_019290 rhlE_2; (GenBank) ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D ROLI_002880 deaD; (GenBank) ATP-dependent RNA helicase DeaD K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D ROLI_043010 recQ; (GenBank) ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D ROLI_019260 eno; (GenBank) Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D ROLI_003690 pnp; (GenBank) Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D ROLI_043910 rho; (GenBank) Transcription termination factor Rho K03628 rho; transcription termination factor Rho D ROLI_043400 dnaK; (GenBank) Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D ROLI_007260 groL; (GenBank) 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D ROLI_021640 hfq; (GenBank) RNA-binding protein Hfq K03666 hfq; host factor-I protein D ROLI_028980 ppk; (GenBank) Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D ROLI_023080 Polyphosphate:NDP phosphotransferase 3 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D ROLI_034640 ppk2; (GenBank) Polyphosphate:NDP phosphotransferase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D ROLI_043680 cca; (GenBank) CCA-adding enzyme K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D ROLI_039550 rppH; (GenBank) RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D ROLI_004940 yvcJ; (GenBank) Nucleotide-binding protein YvcJ K06958 rapZ; RNase adapter protein RapZ D ROLI_030530 hrpB; (GenBank) ATP-dependent RNA helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6] C 03041 Spliceosome C 03011 Ribosome [BR:rfu03011] D ROLI_031950 rpsA; (GenBank) 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D ROLI_020430 rpsB; (GenBank) 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D ROLI_035310 rpsC; (GenBank) 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D ROLI_041220 rpsD; (GenBank) 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D ROLI_034130 rpsE; (GenBank) 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D ROLI_028820 rpsF; (GenBank) 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D ROLI_035420 rpsG; (GenBank) 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D ROLI_034160 rpsH; (GenBank) 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D ROLI_023160 rpsI; (GenBank) 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D ROLI_035390 rpsJ; (GenBank) 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D ROLI_034050 rpsK; (GenBank) 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D ROLI_035430 rpsL; (GenBank) 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D ROLI_034060 rpsM; (GenBank) 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D ROLI_034170 rpsN; (GenBank) 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D ROLI_003720 rpsO; (GenBank) 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D ROLI_036660 rpsP; (GenBank) 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D ROLI_034210 rpsQ; (GenBank) 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D ROLI_028830 rpsR; (GenBank) 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D ROLI_035330 rpsS; (GenBank) 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D ROLI_045110 rpsT; (GenBank) 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D ROLI_003270 rpsU; (GenBank) 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D ROLI_035510 rplA; (GenBank) 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D ROLI_035340 rplB; (GenBank) 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D ROLI_035380 hypothetical protein K02906 RP-L3; large subunit ribosomal protein L3 D ROLI_035370 rplD; (GenBank) 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D ROLI_034180 rplE; (GenBank) 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D ROLI_034150 rplF; (GenBank) 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D ROLI_028840 hypothetical protein K02939 RP-L9; large subunit ribosomal protein L9 D ROLI_035500 rplJ; (GenBank) 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D ROLI_035520 rplK; (GenBank) 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D ROLI_035490 rplL; (GenBank) 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D ROLI_023170 rplM; (GenBank) 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D ROLI_034200 rplN; (GenBank) 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D ROLI_034100 rplO; (GenBank) 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D ROLI_035300 rplP; (GenBank) 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D ROLI_034030 rplQ; (GenBank) 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D ROLI_034140 rplR; (GenBank) 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D ROLI_036710 rplS; (GenBank) 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D ROLI_003100 rplT; (GenBank) 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D ROLI_020300 hypothetical protein K02888 RP-L21; large subunit ribosomal protein L21 D ROLI_035320 rplV; (GenBank) 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D ROLI_035360 rplW; (GenBank) 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D ROLI_034190 rplX; (GenBank) 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D ROLI_020310 rpmA; (GenBank) 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D ROLI_030510 rpmB; (GenBank) 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D ROLI_034220 rpmC; (GenBank) 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D ROLI_034120 rpmD; (GenBank) 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D ROLI_036720 rpmE; (GenBank) 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D ROLI_019100 rpmF; (GenBank) 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D ROLI_009250 rpmG; (GenBank) 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D ROLI_003090 rpmI; (GenBank) 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D ROLI_000850 rpmJ; (GenBank) 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D ROLI_031820 rplY; (GenBank) 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D ROLI_001020 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 03009 Ribosome biogenesis [BR:rfu03009] D ROLI_004800 rnc; (GenBank) Ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3] D ROLI_004810 era; (GenBank) GTPase Era K03595 era; GTPase D ROLI_020350 cgtA; (GenBank) GTPase Obg/CgtA K03979 obgE; GTPase [EC:3.6.5.-] D ROLI_022310 dksA; (GenBank) RNA polymerase-binding transcription factor DksA K06204 dksA; RNA polymerase-binding transcription factor D ROLI_043500 nusA; (GenBank) Transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA D ROLI_024760 nusB; (GenBank) Transcription antitermination protein NusB K03625 nusB; transcription antitermination protein NusB D ROLI_035530 nusG; (GenBank) Transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D ROLI_019450 rsmA; (GenBank) Ribosomal RNA small subunit methyltransferase A K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D ROLI_003870 rsmB_1; (GenBank) Ribosomal RNA small subunit methyltransferase B K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D ROLI_021240 rsmB_2; (GenBank) Ribosomal RNA small subunit methyltransferase B K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D ROLI_036980 rsmC; (GenBank) Ribosomal RNA small subunit methyltransferase C K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172] D ROLI_001930 rsmD; (GenBank) Ribosomal RNA small subunit methyltransferase D K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D ROLI_034680 rsmE; (GenBank) Ribosomal RNA small subunit methyltransferase E K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D ROLI_043880 rsmG; (GenBank) Ribosomal RNA small subunit methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D ROLI_011400 rsmH; (GenBank) Ribosomal RNA small subunit methyltransferase H K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D ROLI_036180 rsmI; (GenBank) Ribosomal RNA small subunit methyltransferase I K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D ROLI_009770 rlmB; (GenBank) 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D ROLI_022020 rlmE; (GenBank) Ribosomal RNA large subunit methyltransferase E K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] D ROLI_001370 rlmH; (GenBank) Ribosomal RNA large subunit methyltransferase H K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D ROLI_022390 rlmI; (GenBank) Ribosomal RNA large subunit methyltransferase I K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D ROLI_008140 rlmJ; (GenBank) Ribosomal RNA large subunit methyltransferase J K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266] D ROLI_000360 rlmN; (GenBank) Dual-specificity RNA methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D ROLI_043650 rlmD; (GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D ROLI_003530 rluA; (GenBank) Dual-specificity RNA pseudouridine synthase RluA K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D ROLI_009150 hypothetical protein K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D ROLI_034000 rluC; (GenBank) Ribosomal large subunit pseudouridine synthase C K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D ROLI_024670 rluD; (GenBank) Ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D ROLI_021620 rluE; (GenBank) Ribosomal large subunit pseudouridine synthase E K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20] D ROLI_030850 rimI; (GenBank) [Ribosomal protein S18]-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D ROLI_025820 rimJ; (GenBank) [Ribosomal protein S5]-alanine N-acetyltransferase K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267] D ROLI_023010 gshB_1; (GenBank) Glutathione synthetase K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-] D ROLI_036680 rimM; (GenBank) Ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM D ROLI_030740 rimO; (GenBank) Ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4] D ROLI_026320 prmC_2; (GenBank) Release factor glutamine methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] D ROLI_023830 rne; (GenBank) Ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] D ROLI_025190 yrrK; (GenBank) Putative pre-16S rRNA nuclease K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D ROLI_002880 deaD; (GenBank) ATP-dependent RNA helicase DeaD K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D ROLI_025050 der; (GenBank) GTPase Der K03977 engA; GTPase D ROLI_021630 hflX; (GenBank) GTPase HflX K03665 hflX; GTPase D ROLI_031020 ywlC; (GenBank) Threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D ROLI_004740 rsh; (GenBank) GTP pyrophosphokinase rsh K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D ROLI_003830 rbfA; (GenBank) Ribosome-binding factor A K02834 rbfA; ribosome-binding factor A D ROLI_043510 rimP; (GenBank) Ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP D ROLI_001360 rsfS; (GenBank) Ribosomal silencing factor RsfS K09710 ybeB; ribosome-associated protein D ROLI_032040 ybeY; (GenBank) Endoribonuclease YbeY K07042 ybeY; probable rRNA maturation factor D ROLI_043210 yvyD; (GenBank) Ribosome hibernation promotion factor K05808 hpf; ribosome hibernation promoting factor D ROLI_031770 ychF; (GenBank) Ribosome-binding ATPase YchF K06942 ychF; ribosome-binding ATPase C 03016 Transfer RNA biogenesis [BR:rfu03016] D ROLI_003310 Ribonuclease K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19] D ROLI_018450 gltX_1; (GenBank) Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D ROLI_035870 gltX1; (GenBank) Glutamate--tRNA ligase 1 K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D ROLI_028950 proS; (GenBank) Proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D ROLI_026430 ileS; (GenBank) Isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D ROLI_037460 leuS; (GenBank) Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D ROLI_014820 metG; (GenBank) Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D ROLI_018990 argS; (GenBank) Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D ROLI_036310 aspS; (GenBank) Aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D ROLI_021210 alaS; (GenBank) Alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D ROLI_006410 thrS; (GenBank) Threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D ROLI_012920 serS; (GenBank) Serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D ROLI_018760 cysS; (GenBank) Cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D ROLI_025270 hypothetical protein K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D ROLI_033730 hisS; (GenBank) Histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D ROLI_003160 pheS; (GenBank) Phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D ROLI_003190 pheT; (GenBank) Phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D ROLI_019170 tyrS; (GenBank) Tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D ROLI_036230 trpS; (GenBank) Tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D ROLI_009070 dtd; (GenBank) D-aminoacyl-tRNA deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D ROLI_001750 Purine nucleoside phosphoramidase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D ROLI_032000 trmB; (GenBank) tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D ROLI_001480 hypothetical protein K15444 TRM9; tRNA (uracil-5-)-methyltransferase TRM9 [EC:2.1.1.229] D ROLI_026480 truA; (GenBank) tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D ROLI_003810 truB; (GenBank) tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D ROLI_021100 nifS; (GenBank) Cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D ROLI_047170 iscS; (GenBank) Cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D ROLI_031020 ywlC; (GenBank) Threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D ROLI_023450 miaA; (GenBank) tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D ROLI_043900 mnmE; (GenBank) tRNA modification GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D ROLI_043890 mnmG; (GenBank) tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D ROLI_043380 cysQ; (GenBank) 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D ROLI_005860 rnpA; (GenBank) Ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D ROLI_043830 rph; (GenBank) Ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56] D ROLI_023980 rnd_1; (GenBank) Ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5] D ROLI_043260 rnd_2; (GenBank) Ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5] D ROLI_003780 kptA; (GenBank) putative RNA 2'-phosphotransferase K07559 kptA; putative RNA 2'-phosphotransferase [EC:2.7.1.-] D ROLI_034560 ettA; (GenBank) Energy-dependent translational throttle protein EttA K06020 ettA; energy-dependent translational throttle protein EttA D ROLI_034490 lysS; (GenBank) Lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6] D ROLI_008560 glyQ; (GenBank) Glycine--tRNA ligase alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D ROLI_008580 hypothetical protein K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D ROLI_023230 gltX_2; (GenBank) Glutamate--tRNA ligase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D ROLI_009160 tadA; (GenBank) tRNA-specific adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D ROLI_014680 dusA; (GenBank) tRNA-dihydrouridine(20/20a) synthase K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-] D ROLI_021730 dusB; (GenBank) tRNA-dihydrouridine synthase B K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D ROLI_032060 miaB; (GenBank) tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D ROLI_005650 mtaB; (GenBank) Threonylcarbamoyladenosine tRNA methylthiotransferase MtaB K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5] D ROLI_021420 trmJ; (GenBank) tRNA (cytidine/uridine/adenosine-2'-O-)-methyltransferase TrmJ K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-] D ROLI_023210 trmFO; (GenBank) Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74] D ROLI_036690 trmD; (GenBank) tRNA (guanine-N(1)-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D ROLI_003530 rluA; (GenBank) Dual-specificity RNA pseudouridine synthase RluA K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D ROLI_023310 mnmA; (GenBank) tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D ROLI_023820 tusA; (GenBank) Sulfur carrier protein TusA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D ROLI_019960 iscA; (GenBank) Iron-binding protein IscA K13628 iscA; iron-sulfur cluster assembly protein D ROLI_025340 ygfZ; (GenBank) tRNA-modifying protein YgfZ K06980 ygfZ; tRNA-modifying protein YgfZ D ROLI_024320 queA; (GenBank) S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D ROLI_005200 queG; (GenBank) Epoxyqueuosine reductase K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6] D ROLI_022980 tgt; (GenBank) Queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D ROLI_026180 tilS; (GenBank) tRNA(Ile)-lysidine synthase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D ROLI_030840 hypothetical protein K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D ROLI_044240 tsaD; (GenBank) tRNA N6-adenosine threonylcarbamoyltransferase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D ROLI_044110 tsaE; (GenBank) tRNA threonylcarbamoyladenosine biosynthesis protein TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D ROLI_000460 rnr; (GenBank) Ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D ROLI_003690 pnp; (GenBank) Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:rfu03012] D ROLI_043480 infB; (GenBank) Translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D ROLI_019810 infC; (GenBank) Translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D ROLI_019550 yheS; (GenBank) putative ABC transporter ATP-binding protein YheS K06158 ABCF3; ATP-binding cassette, subfamily F, member 3 D ROLI_020440 tsf; (GenBank) Elongation factor Ts K02357 tsf; elongation factor Ts D ROLI_032790 tufA_1; (GenBank) Elongation factor Tu K02358 tuf; elongation factor Tu D ROLI_035400 tufA_2; (GenBank) Elongation factor Tu K02358 tuf; elongation factor Tu D ROLI_035410 fusA; (GenBank) Elongation factor G K02355 fusA; elongation factor G D ROLI_019420 prfA; (GenBank) Peptide chain release factor RF1 K02835 prfA; peptide chain release factor 1 D ROLI_023430 frr; (GenBank) Ribosome-recycling factor K02838 frr; ribosome recycling factor D ROLI_019430 prmC_1; (GenBank) Release factor glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D ROLI_031830 pth; (GenBank) Peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D ROLI_030480 infA; (GenBank) Translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D ROLI_025350 efp; (GenBank) Elongation factor P K02356 efp; elongation factor P D ROLI_022730 prfB; (GenBank) Peptide chain release factor RF2 K02836 prfB; peptide chain release factor 2 D ROLI_012540 prfC; (GenBank) Peptide chain release factor 3 K02837 prfC; peptide chain release factor 3 C 03110 Chaperones and folding catalysts [BR:rfu03110] D ROLI_007040 clpA; (GenBank) ATP-dependent Clp protease ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA D ROLI_000900 clpB; (GenBank) Chaperone protein ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D ROLI_017650 clpX; (GenBank) ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D ROLI_044030 hslU; (GenBank) ATP-dependent protease ATPase subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU D ROLI_043400 dnaK; (GenBank) Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D ROLI_007260 groL; (GenBank) 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D ROLI_043410 dnaJ; (GenBank) Chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D ROLI_029010 djlA; (GenBank) Co-chaperone protein DjlA K05801 djlA; DnaJ like chaperone protein D ROLI_043700 hslO; (GenBank) 33 kDa chaperonin K04083 hslO; molecular chaperone Hsp33 D ROLI_043810 grpE; (GenBank) Protein GrpE K03687 GRPE; molecular chaperone GrpE D ROLI_001450 ibpA_1; (GenBank) Small heat shock protein IbpA K04080 ibpA; molecular chaperone IbpA D ROLI_024560 hypothetical protein K04762 hslR; ribosome-associated heat shock protein Hsp15 D ROLI_007250 groS1; (GenBank) 10 kDa chaperonin 1 K04078 groES; chaperonin GroES D ROLI_008350 degP; (GenBank) Periplasmic serine endoprotease DegP K04771 degP; serine protease Do [EC:3.4.21.107] D ROLI_026170 ftsH_2; (GenBank) ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D ROLI_036500 atpB; (GenBank) ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a D ROLI_043970 secB; (GenBank) Protein-export protein SecB K03071 secB; preprotein translocase subunit SecB D ROLI_010230 hypothetical protein K09796 pccA; periplasmic copper chaperone A D ROLI_018570 hypothetical protein K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8] D ROLI_043440 prsA; (GenBank) Foldase protein PrsA K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] D ROLI_019470 surA; (GenBank) Chaperone SurA K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] D ROLI_044060 trxA; (GenBank) Thioredoxin K03671 TXN; thioredoxin D ROLI_037380 cnoX; (GenBank) Chaperedoxin K05838 ybbN; putative thioredoxin D ROLI_043570 grxC; (GenBank) Glutaredoxin 3 K03676 grxC; glutaredoxin 3 D ROLI_019740 grxD; (GenBank) Glutaredoxin 4 K07390 grxD; monothiol glutaredoxin D ROLI_027930 cycY; (GenBank) Thiol:disulfide interchange protein CycY K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE C 04131 Membrane trafficking [BR:rfu04131] D ROLI_019560 ndk; (GenBank) Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D ROLI_023800 fda; (GenBank) Fructose-bisphosphate aldolase class 1 K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D ROLI_017170 gapA; (GenBank) Glyceraldehyde-3-phosphate dehydrogenase 1 K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D ROLI_024180 gap; (GenBank) Glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D ROLI_024190 gap1; (GenBank) Glyceraldehyde-3-phosphate dehydrogenase 1 K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D ROLI_003080 ttuE; (GenBank) Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D ROLI_043290 hypothetical protein K06902 UMF1; MFS transporter, UMF1 family C 04121 Ubiquitin system C 03051 Proteasome C 03032 DNA replication proteins [BR:rfu03032] D ROLI_004660 rnhA; (GenBank) Ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D ROLI_021280 hhaIM; (GenBank) Modification methylase HhaI K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D ROLI_033210 dcm; (GenBank) DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D ROLI_005270 hup; (GenBank) DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta D ROLI_019070 ihfA; (GenBank) Integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D ROLI_031920 ihfB; (GenBank) Integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D ROLI_000010 dnaA; (GenBank) Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D ROLI_018250 dnaB; (GenBank) Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D ROLI_024870 dnaG; (GenBank) DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D ROLI_047240 repC-10; (GenBank) replicase RepC-10 K18996 repC; replication initiation protein RepC D ROLI_023510 ssb; (GenBank) Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D ROLI_033750 dnaE1; (GenBank) DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D ROLI_000020 dnaN; (GenBank) Beta sliding clamp K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D ROLI_019520 hypothetical protein K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D ROLI_037480 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D ROLI_010290 hypothetical protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D ROLI_043960 dnaQ; (GenBank) DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D ROLI_037230 hypothetical protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D ROLI_037700 rnhB; (GenBank) Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D ROLI_042910 polA; (GenBank) DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D ROLI_023280 ligA; (GenBank) DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D ROLI_021380 gyrA; (GenBank) DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D ROLI_000050 gyrB; (GenBank) DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D ROLI_005060 parC; (GenBank) DNA topoisomerase 4 subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D ROLI_013240 parE; (GenBank) DNA topoisomerase 4 subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D ROLI_025930 topA; (GenBank) DNA topoisomerase 1 K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D ROLI_029670 hypothetical protein K03168 topA; DNA topoisomerase I [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:rfu03036] D ROLI_021280 hhaIM; (GenBank) Modification methylase HhaI K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D ROLI_033210 dcm; (GenBank) DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D ROLI_004800 rnc; (GenBank) Ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3] D ROLI_023800 fda; (GenBank) Fructose-bisphosphate aldolase class 1 K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D ROLI_005270 hup; (GenBank) DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta D ROLI_019070 ihfA; (GenBank) Integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D ROLI_031920 ihfB; (GenBank) Integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D ROLI_000010 dnaA; (GenBank) Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D ROLI_003410 hspQ; (GenBank) Heat shock protein HspQ K11940 hspQ; heat shock protein HspQ D ROLI_020130 dps; (GenBank) General stress protein 20U K04047 dps; starvation-inducible DNA-binding protein D ROLI_040670 hypothetical protein K04047 dps; starvation-inducible DNA-binding protein D ROLI_044720 dps1; (GenBank) DNA protection during starvation protein 1 K04047 dps; starvation-inducible DNA-binding protein D ROLI_021640 hfq; (GenBank) RNA-binding protein Hfq K03666 hfq; host factor-I protein D ROLI_029340 putative HTH-type transcriptional regulator K05596 argP; LysR family transcriptional regulator, arginine and lysine transport system/DNA replication regulator D ROLI_003000 lrp_1; (GenBank) Leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D ROLI_003240 lrp_2; (GenBank) Leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D ROLI_014750 lrp_5; (GenBank) Leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D ROLI_004360 smc; (GenBank) Chromosome partition protein Smc K03529 smc; chromosome segregation protein D ROLI_019020 scpA; (GenBank) Segregation and condensation protein A K05896 scpA; segregation and condensation protein A D ROLI_019030 scpB; (GenBank) Segregation and condensation protein B K06024 scpB; segregation and condensation protein B D ROLI_011550 ftsA; (GenBank) Cell division protein FtsA K03590 ftsA; cell division protein FtsA D ROLI_007700 ftsE; (GenBank) Cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D ROLI_011420 ftsI; (GenBank) putative peptidoglycan D,D-transpeptidase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D ROLI_037320 hypothetical protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D ROLI_011410 hypothetical protein K03586 ftsL; cell division protein FtsL D ROLI_011540 ftsQ; (GenBank) Cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ D ROLI_011480 ftsW; (GenBank) putative peptidoglycan glycosyltransferase FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28] D ROLI_007710 hypothetical protein K09811 ftsX; cell division transport system permease protein D ROLI_011560 ftsZ; (GenBank) Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D ROLI_019720 hypothetical protein K09888 zapA; cell division protein ZapA D ROLI_039870 zapE; (GenBank) Cell division protein ZapE K06916 zapE; cell division protein ZapE D ROLI_022750 amiC_1; (GenBank) N-acetylmuramoyl-L-alanine amidase AmiC K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D ROLI_036000 mreB; (GenBank) Cell shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D ROLI_036010 hypothetical protein K03570 mreC; rod shape-determining protein MreC D ROLI_036020 hypothetical protein K03571 mreD; rod shape-determining protein MreD D ROLI_036040 mrdB; (GenBank) Peptidoglycan glycosyltransferase MrdB K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28] D ROLI_036750 Iron-sulfur cluster carrier protein K03496 parA; chromosome partitioning protein D ROLI_042240 hypothetical protein K03496 parA; chromosome partitioning protein D ROLI_043870 parA; (GenBank) Chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein D ROLI_046240 parA; (GenBank) partitioning protein ParA K03496 parA; chromosome partitioning protein D ROLI_047220 repA; (GenBank) replicase RepA K03496 parA; chromosome partitioning protein D ROLI_048150 soj; (GenBank) Chromosome-partitioning ATPase Soj K03496 parA; chromosome partitioning protein D ROLI_048410 virC1_3; (GenBank) Protein virC1 K03496 parA; chromosome partitioning protein D ROLI_033610 hypothetical protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D ROLI_043860 parB; (GenBank) Chromosome-partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D ROLI_046230 parB; (GenBank) partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D ROLI_046320 noc_1; (GenBank) Nucleoid occlusion protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D ROLI_047230 repB; (GenBank) replicase RepA K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D ROLI_047300 noc_3; (GenBank) Nucleoid occlusion protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D ROLI_005060 parC; (GenBank) DNA topoisomerase 4 subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D ROLI_013240 parE; (GenBank) DNA topoisomerase 4 subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D ROLI_043890 mnmG; (GenBank) tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D ROLI_043880 rsmG; (GenBank) Ribosomal RNA small subunit methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D ROLI_023210 trmFO; (GenBank) Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74] D ROLI_024110 xerC_4; (GenBank) Tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC D ROLI_026380 xerD_3; (GenBank) Tyrosine recombinase XerD K03733 xerC; integrase/recombinase XerC D ROLI_013700 IS91 family transposase ISMno24 K04763 xerD; integrase/recombinase XerD D ROLI_013990 IS91 family transposase ISMno24 K04763 xerD; integrase/recombinase XerD D ROLI_014350 IS91 family transposase ISMno24 K04763 xerD; integrase/recombinase XerD D ROLI_014410 IS91 family transposase ISMno24 K04763 xerD; integrase/recombinase XerD D ROLI_014530 IS91 family transposase ISMno24 K04763 xerD; integrase/recombinase XerD D ROLI_020040 xerC_2; (GenBank) Tyrosine recombinase XerC K04763 xerD; integrase/recombinase XerD D ROLI_022450 IS91 family transposase ISMno24 K04763 xerD; integrase/recombinase XerD D ROLI_022460 IS91 family transposase ISMno24 K04763 xerD; integrase/recombinase XerD D ROLI_022490 IS91 family transposase ISMno24 K04763 xerD; integrase/recombinase XerD D ROLI_023570 xerD_1; (GenBank) Tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD D ROLI_024050 IS91 family transposase ISMno24 K04763 xerD; integrase/recombinase XerD D ROLI_025520 xerD_2; (GenBank) Tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD D ROLI_029480 xerD_4; (GenBank) Tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD D ROLI_047390 IS91 family transposase ISMno24 K04763 xerD; integrase/recombinase XerD D ROLI_047850 IS91 family transposase ISMno24 K04763 xerD; integrase/recombinase XerD D ROLI_011370 Iron-sulfur cluster carrier protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D ROLI_016650 Iron-sulfur cluster carrier protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D ROLI_005100 hypothetical protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D ROLI_033890 engB; (GenBank) putative GTP-binding protein EngB K03978 engB; GTP-binding protein C 03400 DNA repair and recombination proteins [BR:rfu03400] D ROLI_026420 ogt; (GenBank) Methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D ROLI_017630 hypothetical protein K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D ROLI_020200 phrA; (GenBank) Deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D ROLI_018510 ung; (GenBank) Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D ROLI_037660 mutY; (GenBank) Adenine DNA glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D ROLI_039530 nth; (GenBank) Endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D ROLI_007290 hypothetical protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D ROLI_043460 nudG; (GenBank) CTP pyrophosphohydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D ROLI_036080 dut; (GenBank) Deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D ROLI_039520 ada; (GenBank) Bifunctional transcriptional activator/DNA repair enzyme Ada K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] D ROLI_035960 phrB; (GenBank) (6-4) photolyase K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13] D ROLI_043390 alkB; (GenBank) Alpha-ketoglutarate-dependent dioxygenase AlkB K03919 alkB; DNA oxidative demethylase [EC:1.14.11.33] D ROLI_031090 hypothetical protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D ROLI_039270 hypothetical protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D ROLI_018820 hypothetical protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D ROLI_045070 mutM; (GenBank) Formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D ROLI_018940 xthA_1; (GenBank) Exodeoxyribonuclease III K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2] D ROLI_037390 xthA_2; (GenBank) Exodeoxyribonuclease III K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2] D ROLI_012840 recJ; (GenBank) Single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D ROLI_023280 ligA; (GenBank) DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D ROLI_042910 polA; (GenBank) DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D ROLI_024260 uvrA; (GenBank) UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A D ROLI_034410 uvrB; (GenBank) UvrABC system protein B K03702 uvrB; excinuclease ABC subunit B D ROLI_034760 uvrC; (GenBank) UvrABC system protein C K03703 uvrC; excinuclease ABC subunit C D ROLI_011350 pcrA; (GenBank) ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D ROLI_035480 rpoB; (GenBank) DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D ROLI_035470 rpoC; (GenBank) DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D ROLI_034040 rpoA; (GenBank) DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D ROLI_004730 rpoZ; (GenBank) DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D ROLI_021560 mfd; (GenBank) Transcription-repair-coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D ROLI_043800 mutS; (GenBank) DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D ROLI_004000 mutL; (GenBank) DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D ROLI_008400 xseA; (GenBank) Exodeoxyribonuclease 7 large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D ROLI_005410 xseB; (GenBank) Exodeoxyribonuclease 7 small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D ROLI_033750 dnaE1; (GenBank) DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D ROLI_000020 dnaN; (GenBank) Beta sliding clamp K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D ROLI_019520 hypothetical protein K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D ROLI_037480 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D ROLI_010290 hypothetical protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D ROLI_043960 dnaQ; (GenBank) DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D ROLI_037230 hypothetical protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D ROLI_023510 ssb; (GenBank) Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D ROLI_033200 vsr; (GenBank) Very short patch repair protein K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-] D ROLI_021220 recA; (GenBank) Protein RecA K03553 recA; recombination protein RecA D ROLI_026290 ruvA; (GenBank) Holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D ROLI_026280 ruvB; (GenBank) Holliday junction ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D ROLI_026300 ruvC; (GenBank) Crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D ROLI_026350 priA; (GenBank) Primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D ROLI_012760 radA; (GenBank) DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms D ROLI_000030 recF; (GenBank) DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF D ROLI_023270 recG; (GenBank) ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D ROLI_004830 recO; (GenBank) DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D ROLI_037250 recR; (GenBank) Recombination protein RecR K06187 recR; recombination protein RecR D ROLI_011590 recN; (GenBank) DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D ROLI_044070 recB; (GenBank) RecBCD enzyme subunit RecB K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-] D ROLI_020520 hypothetical protein K06915 herA; DNA double-strand break repair helicase HerA and related ATPase D ROLI_021380 gyrA; (GenBank) DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D ROLI_000050 gyrB; (GenBank) DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D ROLI_025930 topA; (GenBank) DNA topoisomerase 1 K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D ROLI_029670 hypothetical protein K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D ROLI_005270 hup; (GenBank) DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta D ROLI_019070 ihfA; (GenBank) Integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D ROLI_031920 ihfB; (GenBank) Integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D ROLI_043010 recQ; (GenBank) ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D ROLI_000880 dinB_1; (GenBank) DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D ROLI_044950 dinB_2; (GenBank) DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D ROLI_018470 lexA; (GenBank) LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88] D ROLI_047340 hypothetical protein K14160 imuA; protein ImuA D ROLI_047350 imuB; (GenBank) Protein ImuB K14161 imuB; protein ImuB D ROLI_047360 dnaE2_3; (GenBank) Error-prone DNA polymerase K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7] D ROLI_030310 rep_2; (GenBank) ATP-dependent DNA helicase Rep K03658 helD; DNA helicase IV [EC:5.6.2.4] D ROLI_026100 dbpA; (GenBank) ATP-dependent RNA helicase DbpA K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] D ROLI_018670 hypothetical protein K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D ROLI_033690 hypothetical protein K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] C 03029 Mitochondrial biogenesis [BR:rfu03029] D ROLI_005580 petB; (GenBank) Cytochrome b K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D ROLI_043480 infB; (GenBank) Translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D ROLI_019810 infC; (GenBank) Translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D ROLI_020440 tsf; (GenBank) Elongation factor Ts K02357 tsf; elongation factor Ts D ROLI_032790 tufA_1; (GenBank) Elongation factor Tu K02358 tuf; elongation factor Tu D ROLI_035400 tufA_2; (GenBank) Elongation factor Tu K02358 tuf; elongation factor Tu D ROLI_035410 fusA; (GenBank) Elongation factor G K02355 fusA; elongation factor G D ROLI_024570 hypothetical protein K17675 SUPV3L1; ATP-dependent RNA helicase SUPV3L1/SUV3 [EC:5.6.2.6] D ROLI_004810 era; (GenBank) GTPase Era K03595 era; GTPase D ROLI_019170 tyrS; (GenBank) Tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D ROLI_037460 leuS; (GenBank) Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D ROLI_036310 aspS; (GenBank) Aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D ROLI_018990 argS; (GenBank) Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D ROLI_009190 gatA; (GenBank) Glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D ROLI_037340 cnbH; (GenBank) 2-amino-5-chloromuconic acid deaminase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D ROLI_011680 gatB; (GenBank) Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D ROLI_009180 gatC; (GenBank) Glutamyl-tRNA(Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D ROLI_023510 ssb; (GenBank) Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D ROLI_023370 bamA_1; (GenBank) Outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family D ROLI_043400 dnaK; (GenBank) Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D ROLI_043810 grpE; (GenBank) Protein GrpE K03687 GRPE; molecular chaperone GrpE D ROLI_007260 groL; (GenBank) 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D ROLI_007250 groS1; (GenBank) 10 kDa chaperonin 1 K04078 groES; chaperonin GroES D ROLI_043410 dnaJ; (GenBank) Chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D ROLI_021100 nifS; (GenBank) Cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D ROLI_047170 iscS; (GenBank) Cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D ROLI_019740 grxD; (GenBank) Glutaredoxin 4 K07390 grxD; monothiol glutaredoxin D ROLI_011370 Iron-sulfur cluster carrier protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D ROLI_016650 Iron-sulfur cluster carrier protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D ROLI_025890 ctaB; (GenBank) Protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D ROLI_025870 ctaG; (GenBank) Cytochrome c oxidase assembly protein CtaG K02258 COX11; cytochrome c oxidase assembly protein subunit 11 D ROLI_021410 ctaA; (GenBank) Heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9] D ROLI_033870 yidC; (GenBank) Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D ROLI_025850 hypothetical protein K14998 SURF1; surfeit locus 1 family protein D ROLI_044140 hypothetical protein K07152 SCO1; protein SCO1 B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:rfu02000] D ROLI_045870 Putative multidrug export ATP-binding/permease protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D ROLI_025110 atm1; (GenBank) ATM1-type heavy metal exporter K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter D ROLI_043670 Putative multidrug export ATP-binding/permease protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump D ROLI_008950 Putative multidrug export ATP-binding/permease protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D ROLI_043660 btuD_7; (GenBank) Vitamin B12 import ATP-binding protein BtuD K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D ROLI_044580 btuD_8; (GenBank) Vitamin B12 import ATP-binding protein BtuD K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D ROLI_016090 apxIB_1; (GenBank) Toxin RTX-I translocation ATP-binding protein K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D ROLI_044800 btuD_9; (GenBank) Vitamin B12 import ATP-binding protein BtuD K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D ROLI_044810 apxIB_2; (GenBank) Toxin RTX-I translocation ATP-binding protein K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D ROLI_001190 prsD_1; (GenBank) Type I secretion system ATP-binding protein PrsD K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase D ROLI_039210 prsD_2; (GenBank) Type I secretion system ATP-binding protein PrsD K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase D ROLI_045350 prsD_3; (GenBank) Type I secretion system ATP-binding protein PrsD K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase D ROLI_019140 uup; (GenBank) ABC transporter ATP-binding protein uup K15738 uup; ABC transport system ATP-binding/permease protein D ROLI_016380 modA; (GenBank) Molybdate-binding protein ModA K02020 modA; molybdate transport system substrate-binding protein D ROLI_016370 modB; (GenBank) Molybdenum transport system permease protein ModB K02018 modB; molybdate transport system permease protein D ROLI_016360 btuD_3; (GenBank) Vitamin B12 import ATP-binding protein BtuD K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D ROLI_016620 tupA; (GenBank) Tungstate-binding protein TupA K05772 tupA; tungstate transport system substrate-binding protein D ROLI_016600 tupB; (GenBank) Tungstate uptake system permease protein TupB K05773 tupB; tungstate transport system permease protein D ROLI_016610 tupC; (GenBank) Tungstate uptake system ATP-binding protein TupC K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6] D ROLI_002830 hypothetical protein K15551 tauA; taurine transport system substrate-binding protein D ROLI_002850 hypothetical protein K15552 tauC; taurine transport system permease protein D ROLI_002840 tauB; (GenBank) Taurine import ATP-binding protein TauB K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7] D ROLI_015180 futA1; (GenBank) Iron uptake protein A1 K02012 afuA; iron(III) transport system substrate-binding protein D ROLI_017940 hypothetical protein K02012 afuA; iron(III) transport system substrate-binding protein D ROLI_015170 hypothetical protein K02011 afuB; iron(III) transport system permease protein D ROLI_017930 hypothetical protein K02011 afuB; iron(III) transport system permease protein D ROLI_012580 fbpC2; (GenBank) Fe(3+) ions import ATP-binding protein FbpC 2 K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D ROLI_017920 potA_4; (GenBank) Spermidine/putrescine import ATP-binding protein PotA K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D ROLI_005510 thiB; (GenBank) Thiamine-binding periplasmic protein K02064 thiB; thiamine transport system substrate-binding protein D ROLI_005520 hypothetical protein K02063 thiP; thiamine transport system permease protein D ROLI_005530 thiQ; (GenBank) Thiamine import ATP-binding protein ThiQ K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15] D ROLI_010390 potD; (GenBank) Spermidine/putrescine-binding periplasmic protein K11069 potD; spermidine/putrescine transport system substrate-binding protein D ROLI_013740 hypothetical protein K11069 potD; spermidine/putrescine transport system substrate-binding protein D ROLI_018200 spuD_2; (GenBank) Putrescine-binding periplasmic protein SpuD K11069 potD; spermidine/putrescine transport system substrate-binding protein D ROLI_010420 ydcV_2; (GenBank) Inner membrane ABC transporter permease protein YdcV K11070 potC; spermidine/putrescine transport system permease protein D ROLI_013760 ydcV_3; (GenBank) Inner membrane ABC transporter permease protein YdcV K11070 potC; spermidine/putrescine transport system permease protein D ROLI_018210 ydcV_4; (GenBank) Inner membrane ABC transporter permease protein YdcV K11070 potC; spermidine/putrescine transport system permease protein D ROLI_010410 potB_1; (GenBank) Spermidine/putrescine transport system permease protein PotB K11071 potB; spermidine/putrescine transport system permease protein D ROLI_013750 potB_2; (GenBank) Spermidine/putrescine transport system permease protein PotB K11071 potB; spermidine/putrescine transport system permease protein D ROLI_018220 potB_3; (GenBank) Spermidine/putrescine transport system permease protein PotB K11071 potB; spermidine/putrescine transport system permease protein D ROLI_010400 potA_2; (GenBank) Spermidine/putrescine import ATP-binding protein PotA K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D ROLI_013770 potA_3; (GenBank) Spermidine/putrescine import ATP-binding protein PotA K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D ROLI_018230 potA_5; (GenBank) Spermidine/putrescine import ATP-binding protein PotA K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D ROLI_000560 spuD_1; (GenBank) Putrescine-binding periplasmic protein SpuD K11073 potF; putrescine transport system substrate-binding protein D ROLI_000590 ydcV_1; (GenBank) Inner membrane ABC transporter permease protein YdcV K11074 potI; putrescine transport system permease protein D ROLI_000580 potH; (GenBank) Putrescine transport system permease protein PotH K11075 potH; putrescine transport system permease protein D ROLI_000570 potA_1; (GenBank) Spermidine/putrescine import ATP-binding protein PotA K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16] D ROLI_000520 hypothetical protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D ROLI_000490 hypothetical protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D ROLI_000500 hypothetical protein K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D ROLI_000530 btuD_1; (GenBank) Vitamin B12 import ATP-binding protein BtuD K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D ROLI_009660 hypothetical protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D ROLI_019660 hypothetical protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D ROLI_041590 hypothetical protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D ROLI_009640 hypothetical protein K02001 proW; glycine betaine/proline transport system permease protein D ROLI_019670 opuAB; (GenBank) Glycine betaine transport system permease protein OpuAB K02001 proW; glycine betaine/proline transport system permease protein D ROLI_041570 hypothetical protein K02001 proW; glycine betaine/proline transport system permease protein D ROLI_009650 gbuA_1; (GenBank) Glycine betaine/carnitine transport ATP-binding protein GbuA K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9] D ROLI_019680 opuAA_1; (GenBank) Glycine betaine transport ATP-binding protein OpuAA K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9] D ROLI_041580 opuAA_2; (GenBank) Glycine betaine transport ATP-binding protein OpuAA K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9] D ROLI_016930 hypothetical protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D ROLI_028060 thiY_1; (GenBank) Formylaminopyrimidine-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D ROLI_035660 thiY_2; (GenBank) Formylaminopyrimidine-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D ROLI_041840 hypothetical protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D ROLI_016950 ribX_1; (GenBank) Riboflavin transport system permease protein RibX K02050 ABC.SN.P; NitT/TauT family transport system permease protein D ROLI_028040 ribX_2; (GenBank) Riboflavin transport system permease protein RibX K02050 ABC.SN.P; NitT/TauT family transport system permease protein D ROLI_035670 ribX_3; (GenBank) Riboflavin transport system permease protein RibX K02050 ABC.SN.P; NitT/TauT family transport system permease protein D ROLI_035680 hypothetical protein K02050 ABC.SN.P; NitT/TauT family transport system permease protein D ROLI_041830 ssuC; (GenBank) Putative aliphatic sulfonates transport permease protein SsuC K02050 ABC.SN.P; NitT/TauT family transport system permease protein D ROLI_016940 nrtC; (GenBank) Nitrate import ATP-binding protein NrtC K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D ROLI_028050 ssuB_1; (GenBank) Aliphatic sulfonates import ATP-binding protein SsuB K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D ROLI_035690 ssuB_2; (GenBank) Aliphatic sulfonates import ATP-binding protein SsuB K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D ROLI_037990 btuD_5; (GenBank) Vitamin B12 import ATP-binding protein BtuD K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D ROLI_041820 ssuB_3; (GenBank) Aliphatic sulfonates import ATP-binding protein SsuB K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D ROLI_007570 malK_1; (GenBank) Maltose/maltodextrin import ATP-binding protein MalK K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D ROLI_010160 malK_2; (GenBank) Maltose/maltodextrin import ATP-binding protein MalK K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D ROLI_017480 malK_3; (GenBank) Maltose/maltodextrin import ATP-binding protein MalK K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D ROLI_027130 ugpC_4; (GenBank) sn-glycerol-3-phosphate import ATP-binding protein UgpC K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D ROLI_041470 malK_5; (GenBank) Maltose/maltodextrin import ATP-binding protein MalK K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D ROLI_013880 btuD_2; (GenBank) Vitamin B12 import ATP-binding protein BtuD K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D ROLI_016320 msiK; (GenBank) Diacetylchitobiose uptake system ATP-binding protein MsiK K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D ROLI_032330 msmX_2; (GenBank) Oligosaccharides import ATP-binding protein MsmX K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D ROLI_035260 msmX_3; (GenBank) Oligosaccharides import ATP-binding protein MsmX K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D ROLI_042550 malK_6; (GenBank) Maltose/maltodextrin import ATP-binding protein MalK K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D ROLI_043080 malK_7; (GenBank) Maltose/maltodextrin import ATP-binding protein MalK K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D ROLI_043090 sugC; (GenBank) Trehalose import ATP-binding protein SugC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D ROLI_010110 hypothetical protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D ROLI_010120 lacF_1; (GenBank) Lactose transport system permease protein LacF K10118 msmF; raffinose/stachyose/melibiose transport system permease protein D ROLI_010130 ngcG; (GenBank) Diacetylchitobiose uptake system permease protein NgcG K10119 msmG; raffinose/stachyose/melibiose transport system permease protein D ROLI_028480 hypothetical protein K10232 aglE; alpha-glucoside transport system substrate-binding protein D ROLI_028470 lacF_3; (GenBank) Lactose transport system permease protein LacF K10233 aglF; alpha-glucoside transport system permease protein D ROLI_028460 hypothetical protein K10234 aglG; alpha-glucoside transport system permease protein D ROLI_028440 malK_4; (GenBank) Maltose/maltodextrin import ATP-binding protein MalK K10235 aglK; alpha-glucoside transport system ATP-binding protein D ROLI_013410 hypothetical protein K10236 thuE; trehalose/maltose transport system substrate-binding protein D ROLI_017310 hypothetical protein K10543 xylF; D-xylose transport system substrate-binding protein D ROLI_017320 xylH_1; (GenBank) Xylose transport system permease protein XylH K10544 xylH; D-xylose transport system permease protein D ROLI_017330 frcA_4; (GenBank) Fructose import ATP-binding protein FrcA K10545 xylG; D-xylose transport system ATP-binding protein [EC:7.5.2.10] D ROLI_017130 frcB; (GenBank) Fructose import binding protein FrcB K10552 frcB; fructose transport system substrate-binding protein D ROLI_017140 frcC; (GenBank) Fructose import permease protein FrcC K10553 frcC; fructose transport system permease protein D ROLI_017150 frcA_3; (GenBank) Fructose import ATP-binding protein FrcA K10554 frcA; fructose transport system ATP-binding protein D ROLI_027580 lsrB_2; (GenBank) Autoinducer 2-binding protein LsrB K10559 rhaS; rhamnose transport system substrate-binding protein D ROLI_027600 araH_2; (GenBank) L-arabinose transport system permease protein AraH K10560 rhaP; rhamnose transport system permease protein D ROLI_027610 lsrD_3; (GenBank) Autoinducer 2 import system permease protein LsrD K10561 rhaQ; rhamnose transport system permease protein D ROLI_027590 rbsA_7; (GenBank) Ribose import ATP-binding protein RbsA K10562 rhaT; rhamnose transport system ATP-binding protein [EC:7.5.2.-] D ROLI_000170 hypothetical protein K10439 rbsB; ribose transport system substrate-binding protein D ROLI_003620 hypothetical protein K10439 rbsB; ribose transport system substrate-binding protein D ROLI_013420 xypA; (GenBank) Xylitol-binding protein K10439 rbsB; ribose transport system substrate-binding protein D ROLI_015880 hypothetical protein K10439 rbsB; ribose transport system substrate-binding protein D ROLI_000190 alsC_1; (GenBank) D-allose transport system permease protein AlsC K10440 rbsC; ribose transport system permease protein D ROLI_003630 alsC_2; (GenBank) D-allose transport system permease protein AlsC K10440 rbsC; ribose transport system permease protein D ROLI_003640 alsC_3; (GenBank) D-allose transport system permease protein AlsC K10440 rbsC; ribose transport system permease protein D ROLI_013440 rbsC_2; (GenBank) Ribose import permease protein RbsC K10440 rbsC; ribose transport system permease protein D ROLI_013450 lsrD_1; (GenBank) Autoinducer 2 import system permease protein LsrD K10440 rbsC; ribose transport system permease protein D ROLI_015870 araH_1; (GenBank) L-arabinose transport system permease protein AraH K10440 rbsC; ribose transport system permease protein D ROLI_000180 rbsA_1; (GenBank) Ribose import ATP-binding protein RbsA K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D ROLI_003330 frcA_1; (GenBank) Fructose import ATP-binding protein FrcA K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D ROLI_003650 rbsA_2; (GenBank) Ribose import ATP-binding protein RbsA K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D ROLI_013460 rbsA_4; (GenBank) Ribose import ATP-binding protein RbsA K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D ROLI_015860 rbsA_5; (GenBank) Ribose import ATP-binding protein RbsA K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D ROLI_000200 rbsC_1; (GenBank) Ribose import permease protein RbsC K17206 xltB; putative xylitol transport system permease protein D ROLI_003340 hypothetical protein K17209 iatP; inositol transport system permease protein D ROLI_017090 hypothetical protein K17321 glpV; glycerol transport system substrate-binding protein D ROLI_017050 melD_1; (GenBank) Melibiose/raffinose/stachyose import permease protein MelD K17322 glpP; glycerol transport system permease protein D ROLI_017060 dasC_2; (GenBank) Diacetylchitobiose uptake system permease protein DasC K17323 glpQ; glycerol transport system permease protein D ROLI_017030 msmX_1; (GenBank) Oligosaccharides import ATP-binding protein MsmX K17324 glpS; glycerol transport system ATP-binding protein D ROLI_017040 ugpC_1; (GenBank) sn-glycerol-3-phosphate import ATP-binding protein UgpC K17325 glpT; glycerol transport system ATP-binding protein D ROLI_018020 ugpB_1; (GenBank) sn-glycerol-3-phosphate-binding periplasmic protein UgpB K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein D ROLI_018070 ugpB_2; (GenBank) sn-glycerol-3-phosphate-binding periplasmic protein UgpB K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein D ROLI_037880 ugpB_3; (GenBank) sn-glycerol-3-phosphate-binding periplasmic protein UgpB K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein D ROLI_018030 melD_3; (GenBank) Melibiose/raffinose/stachyose import permease protein MelD K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein D ROLI_018080 ugpA_1; (GenBank) sn-glycerol-3-phosphate transport system permease protein UgpA K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein D ROLI_037870 lacF_4; (GenBank) Lactose transport system permease protein LacF K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein D ROLI_018040 lacG_1; (GenBank) Lactose transport system permease protein LacG K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein D ROLI_018090 lacG_2; (GenBank) Lactose transport system permease protein LacG K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein D ROLI_037860 araQ; (GenBank) L-arabinose transport system permease protein AraQ K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein D ROLI_018010 ugpC_2; (GenBank) sn-glycerol-3-phosphate import ATP-binding protein UgpC K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10] D ROLI_018100 ugpC_3; (GenBank) sn-glycerol-3-phosphate import ATP-binding protein UgpC K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10] D ROLI_037890 msmX_4; (GenBank) Oligosaccharides import ATP-binding protein MsmX K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10] D ROLI_007540 hypothetical protein K10227 smoE; polyol transport system substrate-binding protein D ROLI_041500 hypothetical protein K10227 smoE; polyol transport system substrate-binding protein D ROLI_007550 sugA_1; (GenBank) Trehalose transport system permease protein SugA K10228 smoF; polyol transport system permease protein D ROLI_041490 sugA_3; (GenBank) Trehalose transport system permease protein SugA K10228 smoF; polyol transport system permease protein D ROLI_007560 dasC_1; (GenBank) Diacetylchitobiose uptake system permease protein DasC K10229 smoG; polyol transport system permease protein D ROLI_041480 dasC_3; (GenBank) Diacetylchitobiose uptake system permease protein DasC K10229 smoG; polyol transport system permease protein D ROLI_006820 tmpC; (GenBank) Membrane lipoprotein TmpC K07335 bmpA; basic membrane protein A and related proteins D ROLI_033820 Purine-binding protein K07335 bmpA; basic membrane protein A and related proteins D ROLI_035010 hypothetical protein K07335 bmpA; basic membrane protein A and related proteins D ROLI_006800 hypothetical protein K23535 nupB; general nucleoside transport system permease protein D ROLI_033800 hypothetical protein K23535 nupB; general nucleoside transport system permease protein D ROLI_035030 hypothetical protein K23535 nupB; general nucleoside transport system permease protein D ROLI_006790 rfuD; (GenBank) putative riboflavin import permease protein RfuD K23536 nupC; general nucleoside transport system permease protein D ROLI_033810 hypothetical protein K23536 nupC; general nucleoside transport system permease protein D ROLI_035040 hypothetical protein K23536 nupC; general nucleoside transport system permease protein D ROLI_006810 rbsA_3; (GenBank) Ribose import ATP-binding protein RbsA K23537 nupA; general nucleoside transport system ATP-binding protein D ROLI_033790 mglA; (GenBank) Galactose/methyl galactoside import ATP-binding protein MglA K23537 nupA; general nucleoside transport system ATP-binding protein D ROLI_035020 rbsA_8; (GenBank) Ribose import ATP-binding protein RbsA K23537 nupA; general nucleoside transport system ATP-binding protein D ROLI_017680 hypothetical protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D ROLI_012790 mlaE; (GenBank) Intermembrane phospholipid transport system permease protein MlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D ROLI_012780 mkl; (GenBank) putative ribonucleotide transport ATP-binding protein mkl K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D ROLI_001840 hypothetical protein K07323 mlaC; phospholipid transport system substrate-binding protein D ROLI_013910 hypothetical protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D ROLI_017460 hypothetical protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D ROLI_027140 hypothetical protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D ROLI_032320 hypothetical protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D ROLI_035250 hypothetical protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D ROLI_042510 hypothetical protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D ROLI_043130 hypothetical protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D ROLI_013890 lacF_2; (GenBank) Lactose transport system permease protein LacF K02025 ABC.MS.P; multiple sugar transport system permease protein D ROLI_017450 melD_2; (GenBank) Melibiose/raffinose/stachyose import permease protein MelD K02025 ABC.MS.P; multiple sugar transport system permease protein D ROLI_027150 sugA_2; (GenBank) Trehalose transport system permease protein SugA K02025 ABC.MS.P; multiple sugar transport system permease protein D ROLI_032310 hypothetical protein K02025 ABC.MS.P; multiple sugar transport system permease protein D ROLI_035240 ugpA_2; (GenBank) sn-glycerol-3-phosphate transport system permease protein UgpA K02025 ABC.MS.P; multiple sugar transport system permease protein D ROLI_042520 sugA_4; (GenBank) Trehalose transport system permease protein SugA K02025 ABC.MS.P; multiple sugar transport system permease protein D ROLI_043120 melD_4; (GenBank) Melibiose/raffinose/stachyose import permease protein MelD K02025 ABC.MS.P; multiple sugar transport system permease protein D ROLI_013900 hypothetical protein K02026 ABC.MS.P1; multiple sugar transport system permease protein D ROLI_017430 hypothetical protein K02026 ABC.MS.P1; multiple sugar transport system permease protein D ROLI_027160 sugB; (GenBank) Trehalose transport system permease protein SugB K02026 ABC.MS.P1; multiple sugar transport system permease protein D ROLI_032300 hypothetical protein K02026 ABC.MS.P1; multiple sugar transport system permease protein D ROLI_035230 hypothetical protein K02026 ABC.MS.P1; multiple sugar transport system permease protein D ROLI_042540 dasC_4; (GenBank) Diacetylchitobiose uptake system permease protein DasC K02026 ABC.MS.P1; multiple sugar transport system permease protein D ROLI_043110 hypothetical protein K02026 ABC.MS.P1; multiple sugar transport system permease protein D ROLI_016000 hypothetical protein K02058 ABC.SS.S; simple sugar transport system substrate-binding protein D ROLI_027210 lsrB_1; (GenBank) Autoinducer 2-binding protein LsrB K02058 ABC.SS.S; simple sugar transport system substrate-binding protein D ROLI_027340 hypothetical protein K02058 ABC.SS.S; simple sugar transport system substrate-binding protein D ROLI_016010 hypothetical protein K02057 ABC.SS.P; simple sugar transport system permease protein D ROLI_027230 xylH_2; (GenBank) Xylose transport system permease protein XylH K02057 ABC.SS.P; simple sugar transport system permease protein D ROLI_027240 lsrD_2; (GenBank) Autoinducer 2 import system permease protein LsrD K02057 ABC.SS.P; simple sugar transport system permease protein D ROLI_027330 rbsC_3; (GenBank) Ribose import permease protein RbsC K02057 ABC.SS.P; simple sugar transport system permease protein D ROLI_016020 frcA_2; (GenBank) Fructose import ATP-binding protein FrcA K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-] D ROLI_027220 fruK; (GenBank) Fructose import ATP-binding protein FruK K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-] D ROLI_027320 rbsA_6; (GenBank) Ribose import ATP-binding protein RbsA K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-] D ROLI_020690 sphX; (GenBank) Protein SphX K02040 pstS; phosphate transport system substrate-binding protein D ROLI_043420 hypothetical protein K02040 pstS; phosphate transport system substrate-binding protein D ROLI_020700 hypothetical protein K02037 pstC; phosphate transport system permease protein D ROLI_020710 hypothetical protein K02038 pstA; phosphate transport system permease protein D ROLI_020720 pstB; (GenBank) Phosphate import ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D ROLI_017960 ptxB; (GenBank) putative phosphite transport system-binding protein PtxB K02044 phnD; phosphonate transport system substrate-binding protein D ROLI_020780 phnD2; (GenBank) putative ABC transporter phosphonate/phosphite binding protein PhnD2 K02044 phnD; phosphonate transport system substrate-binding protein D ROLI_017980 phnE_1; (GenBank) Phosphate-import permease protein PhnE K02042 phnE; phosphonate transport system permease protein D ROLI_017990 phnE_2; (GenBank) Phosphate-import permease protein PhnE K02042 phnE; phosphonate transport system permease protein D ROLI_020790 hypothetical protein K02042 phnE; phosphonate transport system permease protein D ROLI_020800 hypothetical protein K02042 phnE; phosphonate transport system permease protein D ROLI_017970 phnC_1; (GenBank) Phosphate-import ATP-binding protein PhnC K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2] D ROLI_020770 phnC_2; (GenBank) Phosphate-import ATP-binding protein PhnC K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2] D ROLI_027680 gltI_1; (GenBank) Glutamate/aspartate import solute-binding protein K10001 gltI; glutamate/aspartate transport system substrate-binding protein D ROLI_027660 gltK; (GenBank) Glutamate/aspartate import permease protein GltK K10002 gltK; glutamate/aspartate transport system permease protein D ROLI_027670 gltJ; (GenBank) Glutamate/aspartate import permease protein GltJ K10003 gltJ; glutamate/aspartate transport system permease protein D ROLI_027650 glnQ_1; (GenBank) Glutamine transport ATP-binding protein GlnQ K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1] D ROLI_033970 yhdW; (GenBank) Putative amino-acid ABC transporter-binding protein YhdW K09969 aapJ; general L-amino acid transport system substrate-binding protein D ROLI_033960 hypothetical protein K09970 aapQ; general L-amino acid transport system permease protein D ROLI_033950 yhdY; (GenBank) Inner membrane amino-acid ABC transporter permease protein YhdY K09971 aapM; general L-amino acid transport system permease protein D ROLI_033940 glnQ_2; (GenBank) Glutamine transport ATP-binding protein GlnQ K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1] D ROLI_000790 hypothetical protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D ROLI_017520 braC_1; (GenBank) Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D ROLI_017780 hypothetical protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D ROLI_020590 hypothetical protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D ROLI_026730 braC_2; (GenBank) Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D ROLI_039640 Leu/Ile/Val-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D ROLI_000760 livH_1; (GenBank) High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein D ROLI_017530 livH_2; (GenBank) High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein D ROLI_017770 livH_3; (GenBank) High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein D ROLI_020540 livH_4; (GenBank) High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein D ROLI_026750 livH_5; (GenBank) High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein D ROLI_039620 livH_7; (GenBank) High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein D ROLI_000780 hypothetical protein K01998 livM; branched-chain amino acid transport system permease protein D ROLI_017540 hypothetical protein K01998 livM; branched-chain amino acid transport system permease protein D ROLI_020530 hypothetical protein K01998 livM; branched-chain amino acid transport system permease protein D ROLI_026720 btuD_4; (GenBank) Vitamin B12 import ATP-binding protein BtuD K01995 livG; branched-chain amino acid transport system ATP-binding protein D ROLI_039630 hypothetical protein K01998 livM; branched-chain amino acid transport system permease protein D ROLI_000740 cysA_1; (GenBank) Sulfate/thiosulfate import ATP-binding protein CysA K01995 livG; branched-chain amino acid transport system ATP-binding protein D ROLI_017550 cysA_2; (GenBank) Sulfate/thiosulfate import ATP-binding protein CysA K01995 livG; branched-chain amino acid transport system ATP-binding protein D ROLI_017750 metN; (GenBank) Methionine import ATP-binding protein MetN K01995 livG; branched-chain amino acid transport system ATP-binding protein D ROLI_020580 lptB_1; (GenBank) Lipopolysaccharide export system ATP-binding protein LptB K01995 livG; branched-chain amino acid transport system ATP-binding protein D ROLI_039600 lptB_3; (GenBank) Lipopolysaccharide export system ATP-binding protein LptB K01995 livG; branched-chain amino acid transport system ATP-binding protein D ROLI_000800 livF_1; (GenBank) High-affinity branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein D ROLI_017560 livF_2; (GenBank) High-affinity branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein D ROLI_017740 livF_3; (GenBank) High-affinity branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein D ROLI_020560 livF_4; (GenBank) High-affinity branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein D ROLI_026740 livF_5; (GenBank) High-affinity branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein D ROLI_039610 livF_7; (GenBank) High-affinity branched-chain amino acid transport ATP-binding protein LivF K11958 natE; neutral amino acid transport system ATP-binding protein D ROLI_031360 amiC_2; (GenBank) Aliphatic amidase expression-regulating protein K11959 urtA; urea transport system substrate-binding protein D ROLI_031350 livH_6; (GenBank) High-affinity branched-chain amino acid transport system permease protein LivH K11960 urtB; urea transport system permease protein D ROLI_031340 hypothetical protein K11961 urtC; urea transport system permease protein D ROLI_011260 hypothetical protein K11962 urtD; urea transport system ATP-binding protein D ROLI_031330 lptB_2; (GenBank) Lipopolysaccharide export system ATP-binding protein LptB K11962 urtD; urea transport system ATP-binding protein D ROLI_031320 livF_6; (GenBank) High-affinity branched-chain amino acid transport ATP-binding protein LivF K11963 urtE; urea transport system ATP-binding protein D ROLI_001470 hypothetical protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D ROLI_003120 artI; (GenBank) Putative ABC transporter arginine-binding protein 2 K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D ROLI_008100 nocT; (GenBank) Nopaline-binding periplasmic protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D ROLI_040220 hisJ; (GenBank) Histidine-binding periplasmic protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D ROLI_001500 hypothetical protein K02029 ABC.PA.P; polar amino acid transport system permease protein D ROLI_003130 hypothetical protein K02029 ABC.PA.P; polar amino acid transport system permease protein D ROLI_008080 hisM; (GenBank) Histidine transport system permease protein HisM K02029 ABC.PA.P; polar amino acid transport system permease protein D ROLI_008090 hypothetical protein K02029 ABC.PA.P; polar amino acid transport system permease protein D ROLI_040230 occQ; (GenBank) Octopine transport system permease protein OccQ K02029 ABC.PA.P; polar amino acid transport system permease protein D ROLI_040240 occM; (GenBank) Octopine transport system permease protein OccM K02029 ABC.PA.P; polar amino acid transport system permease protein D ROLI_003140 artM; (GenBank) Arginine transport ATP-binding protein ArtM K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D ROLI_008110 occP_1; (GenBank) Octopine permease ATP-binding protein P K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D ROLI_040210 occP_2; (GenBank) Octopine permease ATP-binding protein P K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D ROLI_014440 gsiC_2; (GenBank) Glutathione transport system permease protein GsiC K13890 gsiC; glutathione transport system permease protein D ROLI_009040 hypothetical protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D ROLI_011860 appA; (GenBank) Oligopeptide-binding protein AppA K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D ROLI_014430 hypothetical protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D ROLI_021510 hypothetical protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D ROLI_027060 gsiB_1; (GenBank) Glutathione-binding protein GsiB K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D ROLI_031620 agpA; (GenBank) Periplasmic alpha-galactoside-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D ROLI_035120 ddpA; (GenBank) putative D,D-dipeptide-binding periplasmic protein DdpA K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D ROLI_036810 hypothetical protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D ROLI_040480 gsiB_2; (GenBank) Glutathione-binding protein GsiB K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D ROLI_040490 dppA_1; (GenBank) Periplasmic dipeptide transport protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D ROLI_040720 hbpA; (GenBank) Heme-binding protein A K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D ROLI_042750 dppA_2; (GenBank) Periplasmic dipeptide transport protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D ROLI_043520 sgrR; (GenBank) HTH-type transcriptional regulator SgrR K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D ROLI_009030 gsiC_1; (GenBank) Glutathione transport system permease protein GsiC K02033 ABC.PE.P; peptide/nickel transport system permease protein D ROLI_011850 dppB_1; (GenBank) Dipeptide transport system permease protein DppB K02033 ABC.PE.P; peptide/nickel transport system permease protein D ROLI_023470 hypothetical protein K02033 ABC.PE.P; peptide/nickel transport system permease protein D ROLI_027050 dppB_2; (GenBank) Dipeptide transport system permease protein DppB K02033 ABC.PE.P; peptide/nickel transport system permease protein D ROLI_031630 dppB_3; (GenBank) Dipeptide transport system permease protein DppB K02033 ABC.PE.P; peptide/nickel transport system permease protein D ROLI_035110 ddpB; (GenBank) putative D,D-dipeptide transport system permease protein DdpB K02033 ABC.PE.P; peptide/nickel transport system permease protein D ROLI_040470 gsiC_3; (GenBank) Glutathione transport system permease protein GsiC K02033 ABC.PE.P; peptide/nickel transport system permease protein D ROLI_040750 gsiC_4; (GenBank) Glutathione transport system permease protein GsiC K02033 ABC.PE.P; peptide/nickel transport system permease protein D ROLI_042760 dppB_4; (GenBank) Dipeptide transport system permease protein DppB K02033 ABC.PE.P; peptide/nickel transport system permease protein D ROLI_009020 gsiD_1; (GenBank) Glutathione transport system permease protein GsiD K02034 ABC.PE.P1; peptide/nickel transport system permease protein D ROLI_011840 oppC; (GenBank) Oligopeptide transport system permease protein OppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein D ROLI_014450 gsiD_2; (GenBank) Glutathione transport system permease protein GsiD K02034 ABC.PE.P1; peptide/nickel transport system permease protein D ROLI_023480 hypothetical protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein D ROLI_027040 dppC; (GenBank) Dipeptide transport system permease protein DppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein D ROLI_031640 hypothetical protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein D ROLI_035100 ddpC; (GenBank) putative D,D-dipeptide transport system permease protein DdpC K02034 ABC.PE.P1; peptide/nickel transport system permease protein D ROLI_040460 gsiD_3; (GenBank) Glutathione transport system permease protein GsiD K02034 ABC.PE.P1; peptide/nickel transport system permease protein D ROLI_040760 gsiD_4; (GenBank) Glutathione transport system permease protein GsiD K02034 ABC.PE.P1; peptide/nickel transport system permease protein D ROLI_042770 gsiD_5; (GenBank) Glutathione transport system permease protein GsiD K02034 ABC.PE.P1; peptide/nickel transport system permease protein D ROLI_009010 gsiA_1; (GenBank) Glutathione import ATP-binding protein GsiA K02031 ddpD; peptide/nickel transport system ATP-binding protein D ROLI_011870 gsiA_2; (GenBank) Glutathione import ATP-binding protein GsiA K02031 ddpD; peptide/nickel transport system ATP-binding protein D ROLI_014460 oppD_1; (GenBank) Oligopeptide transport ATP-binding protein OppD K02031 ddpD; peptide/nickel transport system ATP-binding protein D ROLI_023490 gsiA_3; (GenBank) Glutathione import ATP-binding protein GsiA K02031 ddpD; peptide/nickel transport system ATP-binding protein D ROLI_027030 gsiA_4; (GenBank) Glutathione import ATP-binding protein GsiA K02031 ddpD; peptide/nickel transport system ATP-binding protein D ROLI_031610 gsiA_5; (GenBank) Glutathione import ATP-binding protein GsiA K02031 ddpD; peptide/nickel transport system ATP-binding protein D ROLI_035090 oppD_2; (GenBank) Oligopeptide transport ATP-binding protein OppD K02031 ddpD; peptide/nickel transport system ATP-binding protein D ROLI_040440 oppD_3; (GenBank) Oligopeptide transport ATP-binding protein OppD K02031 ddpD; peptide/nickel transport system ATP-binding protein D ROLI_040770 gsiA_6; (GenBank) Glutathione import ATP-binding protein GsiA K02031 ddpD; peptide/nickel transport system ATP-binding protein D ROLI_042780 oppD_4; (GenBank) Oligopeptide transport ATP-binding protein OppD K02031 ddpD; peptide/nickel transport system ATP-binding protein D ROLI_014470 oppF_1; (GenBank) Oligopeptide transport ATP-binding protein OppF K02032 ddpF; peptide/nickel transport system ATP-binding protein D ROLI_035080 oppF_2; (GenBank) Oligopeptide transport ATP-binding protein OppF K02032 ddpF; peptide/nickel transport system ATP-binding protein D ROLI_040430 btuD_6; (GenBank) Vitamin B12 import ATP-binding protein BtuD K02032 ddpF; peptide/nickel transport system ATP-binding protein D ROLI_042790 oppF_3; (GenBank) Oligopeptide transport ATP-binding protein OppF K02032 ddpF; peptide/nickel transport system ATP-binding protein D ROLI_037160 oppA; (GenBank) Periplasmic oligopeptide-binding protein K13893 yejA; microcin C transport system substrate-binding protein D ROLI_037150 yejB; (GenBank) Inner membrane ABC transporter permease protein YejB K13894 yejB; microcin C transport system permease protein D ROLI_037140 yejE; (GenBank) Inner membrane ABC transporter permease protein YejE K13895 yejE; microcin C transport system permease protein D ROLI_037130 yejF; (GenBank) putative ABC transporter ATP-binding protein YejF K13896 yejF; microcin C transport system ATP-binding protein D ROLI_017610 hypothetical protein K09815 znuA; zinc transport system substrate-binding protein D ROLI_017580 znuB; (GenBank) High-affinity zinc uptake system membrane protein ZnuB K09816 znuB; zinc transport system permease protein D ROLI_017590 znuC; (GenBank) Zinc import ATP-binding protein ZnuC K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D ROLI_003960 hypothetical protein K11707 troA; manganese/zinc/iron transport system substrate-binding protein D ROLI_003980 mntC; (GenBank) Manganese transport system membrane protein MntC K11708 troC; manganese/zinc/iron transport system permease protein D ROLI_003990 mntD; (GenBank) Manganese transport system membrane protein MntD K11709 troD; manganese/zinc/iron transport system permease protein D ROLI_003970 mntB; (GenBank) Manganese transport system ATP-binding protein MntB K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5] D ROLI_027820 hypothetical protein K03523 bioY; biotin transport system substrate-specific component D ROLI_028030 ykoF; (GenBank) Putative HMP/thiamine-binding protein YkoF K24620 ykoF; energy-coupling factor transport system substrate-specific component D ROLI_019500 hypothetical protein K07091 lptF; lipopolysaccharide export system permease protein D ROLI_019490 hypothetical protein K11720 lptG; lipopolysaccharide export system permease protein D ROLI_043220 lptB_4; (GenBank) Lipopolysaccharide export system ATP-binding protein LptB K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D ROLI_002220 nosY; (GenBank) putative ABC transporter permease protein NosY K19341 nosY; Cu-processing system permease protein D ROLI_002230 nosF; (GenBank) putative ABC transporter ATP-binding protein NosF K19340 nosF; Cu-processing system ATP-binding protein D ROLI_028930 lolE; (GenBank) Lipoprotein-releasing system transmembrane protein LolE K09808 lolC_E_F; lipoprotein-releasing system permease protein D ROLI_028920 lolD; (GenBank) Lipoprotein-releasing system ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D ROLI_027940 hypothetical protein K02196 ccmD; heme exporter protein D D ROLI_027950 ccmC; (GenBank) Heme exporter protein C K02195 ccmC; heme exporter protein C D ROLI_027960 ccmB; (GenBank) Heme exporter protein B K02194 ccmB; heme exporter protein B D ROLI_027970 ccmA; (GenBank) Cytochrome c biogenesis ATP-binding export protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D ROLI_007710 hypothetical protein K09811 ftsX; cell division transport system permease protein D ROLI_007700 ftsE; (GenBank) Cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D ROLI_034810 yadH; (GenBank) Inner membrane transport permease YadH K01992 ABC-2.P; ABC-2 type transport system permease protein D ROLI_042150 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D ROLI_034820 yadG_1; (GenBank) putative ABC transporter ATP-binding protein YadG K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D ROLI_042140 yadG_2; (GenBank) putative ABC transporter ATP-binding protein YadG K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D ROLI_010460 hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein D ROLI_015070 hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein D ROLI_035810 hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein D ROLI_010450 putative ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D ROLI_015080 putative ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D ROLI_035800 putative ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D ROLI_021060 sufC; (GenBank) putative ATP-dependent transporter SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein D ROLI_026590 norM; (GenBank) Multidrug resistance protein NorM K26939 norM; MATE family, multidrug efflux pump D ROLI_026330 mepA_1; (GenBank) Multidrug export protein MepA K26937 dinF; MATE family, multidrug efflux pump D ROLI_029660 mepA_2; (GenBank) Multidrug export protein MepA K26937 dinF; MATE family, multidrug efflux pump D ROLI_032410 dinF; (GenBank) DNA damage-inducible protein F K26937 dinF; MATE family, multidrug efflux pump D ROLI_047510 hypothetical protein K26937 dinF; MATE family, multidrug efflux pump D ROLI_016390 hypothetical protein K25223 arsJ; MFS transporter, APGE family, 1-arseno-3-phosphoglycerate exporter D ROLI_020850 hypothetical protein K25223 arsJ; MFS transporter, APGE family, 1-arseno-3-phosphoglycerate exporter D ROLI_002430 pucC_1; (GenBank) Protein PucC K08226 pucC; MFS transporter, BCD family, chlorophyll transporter D ROLI_002530 pucC_2; (GenBank) Protein PucC K08226 pucC; MFS transporter, BCD family, chlorophyll transporter D ROLI_021940 pucC_3; (GenBank) Protein PucC K08226 pucC; MFS transporter, BCD family, chlorophyll transporter D ROLI_032180 tetA; (GenBank) Tetracycline resistance protein, class C K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein D ROLI_021550 bcr_1; (GenBank) Bicyclomycin resistance protein K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D ROLI_029140 bcr_2; (GenBank) Bicyclomycin resistance protein K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D ROLI_043290 hypothetical protein K06902 UMF1; MFS transporter, UMF1 family D ROLI_025660 ptsP; (GenBank) Phosphoenolpyruvate-dependent phosphotransferase system K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9] D ROLI_004960 ptsO; (GenBank) Phosphocarrier protein NPr K02784 ptsH; phosphocarrier protein HPr D ROLI_004950 hypothetical protein K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D ROLI_043200 ptsN; (GenBank) Nitrogen regulatory protein K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] D ROLI_035860 aqpZ2; (GenBank) Aquaporin Z 2 K06188 aqpZ; aquaporin Z D ROLI_043640 hypothetical protein K08714 VGSC; voltage-gated sodium channel D ROLI_001810 nrgA; (GenBank) Ammonium transporter K03320 amt; ammonium transporter, Amt family D ROLI_041700 hypothetical protein K03320 amt; ammonium transporter, Amt family D ROLI_004290 gstB; (GenBank) Glutathione S-transferase GST-6.0 K00799 GST; glutathione S-transferase [EC:2.5.1.18] D ROLI_005190 fzlA; (GenBank) FtsZ-localized protein A K00799 GST; glutathione S-transferase [EC:2.5.1.18] D ROLI_008290 gst; (GenBank) Glutathione S-transferase GST-4.5 K00799 GST; glutathione S-transferase [EC:2.5.1.18] D ROLI_010000 yfcG_3; (GenBank) Disulfide-bond oxidoreductase YfcG K00799 GST; glutathione S-transferase [EC:2.5.1.18] D ROLI_012020 hypothetical protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D ROLI_032480 yfcG_4; (GenBank) Disulfide-bond oxidoreductase YfcG K00799 GST; glutathione S-transferase [EC:2.5.1.18] D ROLI_036140 hypothetical protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D ROLI_037500 hypothetical protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D ROLI_006600 hypothetical protein K07114 yfbK; Ca-activated chloride channel homolog D ROLI_042070 hypothetical protein K07114 yfbK; Ca-activated chloride channel homolog D ROLI_042080 hypothetical protein K07114 yfbK; Ca-activated chloride channel homolog D ROLI_042090 hypothetical protein K07114 yfbK; Ca-activated chloride channel homolog D ROLI_003220 mscL; (GenBank) Large-conductance mechanosensitive channel K03282 mscL; large conductance mechanosensitive channel D ROLI_020250 hypothetical protein K05802 mscK; potassium-dependent mechanosensitive channel D ROLI_001900 mscS_1; (GenBank) Small-conductance mechanosensitive channel K03442 mscS; small conductance mechanosensitive channel D ROLI_044620 hypothetical protein K03442 mscS; small conductance mechanosensitive channel D ROLI_047480 hypothetical protein K03442 mscS; small conductance mechanosensitive channel D ROLI_047630 mscS_4; (GenBank) Small-conductance mechanosensitive channel K03442 mscS; small conductance mechanosensitive channel D ROLI_010360 hypothetical protein K22044 ybiO; moderate conductance mechanosensitive channel D ROLI_015730 hypothetical protein K22044 ybiO; moderate conductance mechanosensitive channel D ROLI_009340 mgtE; (GenBank) Magnesium transporter MgtE K06213 mgtE; magnesium transporter D ROLI_038650 motA; (GenBank) Motility protein A K02556 motA; chemotaxis protein MotA D ROLI_038900 motB; (GenBank) Motility protein B K02557 motB; chemotaxis protein MotB D ROLI_026240 tolQ; (GenBank) Tol-Pal system protein TolQ K03562 tolQ; biopolymer transport protein TolQ D ROLI_026230 tolR; (GenBank) Tol-Pal system protein TolR K03560 tolR; biopolymer transport protein TolR D ROLI_034010 crcB; (GenBank) Putative fluoride ion transporter CrcB K06199 crcB; fluoride exporter D ROLI_023590 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D ROLI_037440 opmA; (GenBank) Porin K08720 ompU; outer membrane protein OmpU D ROLI_034700 pal_3; (GenBank) Peptidoglycan-associated lipoprotein K03286 TC.OOP; OmpA-OmpF porin, OOP family D ROLI_038990 ompA_2; (GenBank) Outer membrane protein A K03286 TC.OOP; OmpA-OmpF porin, OOP family D ROLI_023030 hypothetical protein K06076 fadL; long-chain fatty acid transport protein D ROLI_025390 bepC_2; (GenBank) Outer membrane efflux protein BepC K12340 tolC; outer membrane protein D ROLI_016100 bepC_1; (GenBank) Outer membrane efflux protein BepC K12543 lapE; outer membrane protein, adhesin transport system D ROLI_044480 hypothetical protein K16552 exoF; polysaccharide biosynthesis/export protein ExoF D ROLI_024800 hypothetical protein K01991 wza; polysaccharide biosynthesis/export protein D ROLI_045150 hypothetical protein K01991 wza; polysaccharide biosynthesis/export protein D ROLI_023370 bamA_1; (GenBank) Outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family D ROLI_011580 bamD; (GenBank) Outer membrane protein assembly factor BamD K05807 bamD; outer membrane protein assembly factor BamD D ROLI_028420 bamA_2; (GenBank) Outer membrane protein assembly factor BamA K07278 tamA; translocation and assembly module TamA D ROLI_028410 hypothetical protein K09800 tamB; translocation and assembly module TamB D ROLI_043230 lptA; (GenBank) Lipopolysaccharide export system protein LptA K09774 lptA; lipopolysaccharide export system protein LptA D ROLI_043240 hypothetical protein K11719 lptC; lipopolysaccharide export system protein LptC D ROLI_019480 lptD; (GenBank) LPS-assembly protein LptD K04744 lptD; LPS-assembly protein D ROLI_037470 hypothetical protein K03643 lptE; LPS-assembly lipoprotein D ROLI_044870 hypothetical protein K07274 mipA; MipA family protein D ROLI_032030 hypothetical protein K06189 corC; hemolysin (HlyC) family protein D ROLI_004500 bepE; (GenBank) Efflux pump membrane transporter BepE K18138 acrB; multidrug efflux pump D ROLI_035940 bepG; (GenBank) Efflux pump membrane transporter BepG K18138 acrB; multidrug efflux pump D ROLI_025090 mdtC_1; (GenBank) Multidrug resistance protein MdtC K18989 vexF; multidrug efflux pump D ROLI_044890 czcA_2; (GenBank) Cobalt-zinc-cadmium resistance protein CzcA K18989 vexF; multidrug efflux pump D ROLI_021180 emrE; (GenBank) Multidrug transporter EmrE K03297 emrE; small multidrug resistance pump D ROLI_011300 rarD; (GenBank) Protein RarD K05786 rarD; chloramphenicol-sensitive protein RarD D ROLI_028900 hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D ROLI_046930 hypothetical protein K03299 TC.GNTP; gluconate:H+ symporter, GntP family D ROLI_026800 lldP; (GenBank) L-lactate permease K03303 lutP; lactate permease D ROLI_040120 Glycine betaine transporter 2 K05020 opuD; glycine betaine transporter D ROLI_010180 opuD; (GenBank) Glycine betaine transporter OpuD K02168 betT; choline/glycine/proline betaine transport protein D ROLI_034790 yrbG; (GenBank) Inner membrane protein YrbG K07301 yrbG; cation:H+ antiporter D ROLI_039970 nhaP2; (GenBank) K(+)/H(+) antiporter NhaP2 K03316 nhaP; Na+:H+ antiporter D ROLI_024510 kefC; (GenBank) Glutathione-regulated potassium-efflux system protein KefC K11747 kefB; glutathione-regulated potassium-efflux system protein KefB D ROLI_008530 trkI; (GenBank) Trk system potassium uptake protein TrkI K03498 trkH; trk/ktr system potassium uptake protein D ROLI_021650 hypothetical protein K03498 trkH; trk/ktr system potassium uptake protein D ROLI_047720 ktrB; (GenBank) Ktr system potassium uptake protein B K03498 trkH; trk/ktr system potassium uptake protein D ROLI_021660 trkA; (GenBank) Trk system potassium uptake protein TrkA K03499 trkA; trk/ktr system potassium uptake protein D ROLI_047730 ktrA; (GenBank) Ktr system potassium uptake protein A K03499 trkA; trk/ktr system potassium uptake protein D ROLI_011600 clcA; (GenBank) H(+)/Cl(-) exchange transporter ClcA K03281 clcA; chloride channel protein, CIC family D ROLI_023740 srpC; (GenBank) putative chromate transport protein K07240 chrA; chromate transporter D ROLI_009970 putative sulfate transporter K03321 TC.SULP; sulfate permease, SulP family D ROLI_025740 bicA; (GenBank) Bicarbonate transporter BicA K03321 TC.SULP; sulfate permease, SulP family D ROLI_004120 Lactate-binding periplasmic protein K11688 dctP; TRAP-type transport system periplasmic protein D ROLI_010860 yiaO; (GenBank) 2,3-diketo-L-gulonate-binding periplasmic protein YiaO K11688 dctP; TRAP-type transport system periplasmic protein D ROLI_012970 dctP_1; (GenBank) Solute-binding protein K11688 dctP; TRAP-type transport system periplasmic protein D ROLI_013320 hypothetical protein K11688 dctP; TRAP-type transport system periplasmic protein D ROLI_015310 siaP_1; (GenBank) Sialic acid-binding periplasmic protein SiaP K11688 dctP; TRAP-type transport system periplasmic protein D ROLI_016780 Solute-binding protein K11688 dctP; TRAP-type transport system periplasmic protein D ROLI_016870 Monocarboxylate 2-oxoacid-binding periplasmic protein K11688 dctP; TRAP-type transport system periplasmic protein D ROLI_019910 dctP_2; (GenBank) C4-dicarboxylate-binding periplasmic protein DctP K11688 dctP; TRAP-type transport system periplasmic protein D ROLI_022560 Monocarboxylate 2-oxoacid-binding periplasmic protein K11688 dctP; TRAP-type transport system periplasmic protein D ROLI_028090 hypothetical protein K11688 dctP; TRAP-type transport system periplasmic protein D ROLI_028290 Solute-binding protein K11688 dctP; TRAP-type transport system periplasmic protein D ROLI_028380 tsaT; (GenBank) Outer membrane transporter protein TsaT K11688 dctP; TRAP-type transport system periplasmic protein D ROLI_029850 siaP_2; (GenBank) Sialic acid-binding periplasmic protein SiaP K11688 dctP; TRAP-type transport system periplasmic protein D ROLI_031420 Monocarboxylate 2-oxoacid-binding periplasmic protein K11688 dctP; TRAP-type transport system periplasmic protein D ROLI_034890 hypothetical protein K11688 dctP; TRAP-type transport system periplasmic protein D ROLI_036920 Solute-binding protein K11688 dctP; TRAP-type transport system periplasmic protein D ROLI_038520 hypothetical protein K11688 dctP; TRAP-type transport system periplasmic protein D ROLI_040060 hypothetical protein K11688 dctP; TRAP-type transport system periplasmic protein D ROLI_041020 Solute-binding protein K11688 dctP; TRAP-type transport system periplasmic protein D ROLI_004110 hypothetical protein K11689 dctQ; TRAP-type transport system small permease protein D ROLI_010840 hypothetical protein K11689 dctQ; TRAP-type transport system small permease protein D ROLI_012980 hypothetical protein K11689 dctQ; TRAP-type transport system small permease protein D ROLI_013300 hypothetical protein K11689 dctQ; TRAP-type transport system small permease protein D ROLI_015300 hypothetical protein K11689 dctQ; TRAP-type transport system small permease protein D ROLI_016790 hypothetical protein K11689 dctQ; TRAP-type transport system small permease protein D ROLI_016860 hypothetical protein K11689 dctQ; TRAP-type transport system small permease protein D ROLI_019920 dctQ; (GenBank) C4-dicarboxylate TRAP transporter small permease protein DctQ K11689 dctQ; TRAP-type transport system small permease protein D ROLI_028080 hypothetical protein K11689 dctQ; TRAP-type transport system small permease protein D ROLI_028280 teaB; (GenBank) Ectoine TRAP transporter small permease protein TeaB K11689 dctQ; TRAP-type transport system small permease protein D ROLI_028370 hypothetical protein K11689 dctQ; TRAP-type transport system small permease protein D ROLI_029840 hypothetical protein K11689 dctQ; TRAP-type transport system small permease protein D ROLI_031440 hypothetical protein K11689 dctQ; TRAP-type transport system small permease protein D ROLI_034900 hypothetical protein K11689 dctQ; TRAP-type transport system small permease protein D ROLI_036910 hypothetical protein K11689 dctQ; TRAP-type transport system small permease protein D ROLI_038510 hypothetical protein K11689 dctQ; TRAP-type transport system small permease protein D ROLI_040050 hypothetical protein K11689 dctQ; TRAP-type transport system small permease protein D ROLI_041030 hypothetical protein K11689 dctQ; TRAP-type transport system small permease protein D ROLI_004100 hypothetical protein K11690 dctM; TRAP-type transport system large permease protein D ROLI_010850 siaT; (GenBank) Sialic acid TRAP transporter permease protein SiaT K11690 dctM; TRAP-type transport system large permease protein D ROLI_012990 dctM_1; (GenBank) C4-dicarboxylate TRAP transporter large permease protein DctM K11690 dctM; TRAP-type transport system large permease protein D ROLI_013310 siaM_1; (GenBank) Sialic acid TRAP transporter large permease protein SiaM K11690 dctM; TRAP-type transport system large permease protein D ROLI_015290 siaM_2; (GenBank) Sialic acid TRAP transporter large permease protein SiaM K11690 dctM; TRAP-type transport system large permease protein D ROLI_016800 dctM_2; (GenBank) C4-dicarboxylate TRAP transporter large permease protein DctM K11690 dctM; TRAP-type transport system large permease protein D ROLI_016850 dctM_3; (GenBank) C4-dicarboxylate TRAP transporter large permease protein DctM K11690 dctM; TRAP-type transport system large permease protein D ROLI_019930 dctM_4; (GenBank) C4-dicarboxylate TRAP transporter large permease protein DctM K11690 dctM; TRAP-type transport system large permease protein D ROLI_028070 dctM_5; (GenBank) C4-dicarboxylate TRAP transporter large permease protein DctM K11690 dctM; TRAP-type transport system large permease protein D ROLI_028270 dctM_6; (GenBank) C4-dicarboxylate TRAP transporter large permease protein DctM K11690 dctM; TRAP-type transport system large permease protein D ROLI_028360 dctM_7; (GenBank) C4-dicarboxylate TRAP transporter large permease protein DctM K11690 dctM; TRAP-type transport system large permease protein D ROLI_029830 dctM_8; (GenBank) C4-dicarboxylate TRAP transporter large permease protein DctM K11690 dctM; TRAP-type transport system large permease protein D ROLI_031430 dctM_9; (GenBank) C4-dicarboxylate TRAP transporter large permease protein DctM K11690 dctM; TRAP-type transport system large permease protein D ROLI_034910 dctM_10; (GenBank) C4-dicarboxylate TRAP transporter large permease protein DctM K11690 dctM; TRAP-type transport system large permease protein D ROLI_036900 dctM_11; (GenBank) C4-dicarboxylate TRAP transporter large permease protein DctM K11690 dctM; TRAP-type transport system large permease protein D ROLI_038500 dctM_12; (GenBank) C4-dicarboxylate TRAP transporter large permease protein DctM K11690 dctM; TRAP-type transport system large permease protein D ROLI_040040 dctM_13; (GenBank) C4-dicarboxylate TRAP transporter large permease protein DctM K11690 dctM; TRAP-type transport system large permease protein D ROLI_041040 siaM_3; (GenBank) Sialic acid TRAP transporter large permease protein SiaM K11690 dctM; TRAP-type transport system large permease protein D ROLI_037840 hypothetical protein K03324 yjbB; phosphate:Na+ symporter D ROLI_038850 ndhB_2; (GenBank) NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic K05559 phaA; multicomponent K+:H+ antiporter subunit A D ROLI_038840 mrpC; (GenBank) Na(+)/H(+) antiporter subunit C K05560 phaC; multicomponent K+:H+ antiporter subunit C D ROLI_038830 mrpD; (GenBank) Na(+)/H(+) antiporter subunit D K05561 phaD; multicomponent K+:H+ antiporter subunit D D ROLI_038820 mrpE; (GenBank) Na(+)/H(+) antiporter subunit E K05562 phaE; multicomponent K+:H+ antiporter subunit E D ROLI_038810 mrpF; (GenBank) Na(+)/H(+) antiporter subunit F K05563 phaF; multicomponent K+:H+ antiporter subunit F D ROLI_038800 hypothetical protein K05564 phaG; multicomponent K+:H+ antiporter subunit G D ROLI_036210 murJ; (GenBank) putative lipid II flippase MurJ K03980 murJ; putative peptidoglycan lipid II flippase D ROLI_010260 hypothetical protein K13936 mdcF; malonate transporter and related proteins D ROLI_039800 hypothetical protein K13936 mdcF; malonate transporter and related proteins D ROLI_009540 hypothetical protein K24180 mleP; malate permease and related proteins D ROLI_029330 argO; (GenBank) Arginine exporter protein ArgO K06895 lysE; L-lysine exporter family protein LysE/ArgO D ROLI_003480 rhtB_1; (GenBank) Homoserine/homoserine lactone efflux protein K05834 rhtB; homoserine/homoserine lactone efflux protein D ROLI_025780 rhtB_3; (GenBank) Homoserine/homoserine lactone efflux protein K05834 rhtB; homoserine/homoserine lactone efflux protein D ROLI_018600 rhtC_1; (GenBank) Threonine efflux protein K05835 rhtC; threonine efflux protein D ROLI_046900 rhtC_2; (GenBank) Threonine efflux protein K05835 rhtC; threonine efflux protein D ROLI_030960 hypothetical protein K26605 azlC; branched chain amino acid efflux pump D ROLI_046950 hypothetical protein K26605 azlC; branched chain amino acid efflux pump D ROLI_030970 hypothetical protein K26606 azlD; branched chain amino acid efflux pump D ROLI_004600 hypothetical protein K07793 tctA; putative tricarboxylic transport membrane protein D ROLI_009570 hypothetical protein K07793 tctA; putative tricarboxylic transport membrane protein D ROLI_010050 hypothetical protein K07793 tctA; putative tricarboxylic transport membrane protein D ROLI_016540 hypothetical protein K07793 tctA; putative tricarboxylic transport membrane protein D ROLI_004610 hypothetical protein K07794 tctB; putative tricarboxylic transport membrane protein D ROLI_004620 hypothetical protein K07795 tctC; putative tricarboxylic transport membrane protein D ROLI_009590 hypothetical protein K07795 tctC; putative tricarboxylic transport membrane protein D ROLI_010030 hypothetical protein K07795 tctC; putative tricarboxylic transport membrane protein D ROLI_043320 queuosine precursor transporter K09125 yhhQ; queuosine precursor transporter D ROLI_039790 hypothetical protein K22737 mbfA; erythrin-vacuolar iron transport family protein D ROLI_011480 ftsW; (GenBank) putative peptidoglycan glycosyltransferase FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28] D ROLI_026200 pal_2; (GenBank) Peptidoglycan-associated lipoprotein K03640 pal; peptidoglycan-associated lipoprotein D ROLI_026210 tolB; (GenBank) Tol-Pal system protein TolB K03641 tolB; TolB protein D ROLI_023810 dsbD; (GenBank) Thiol:disulfide interchange protein DsbD K06196 ccdA; cytochrome c-type biogenesis protein D ROLI_041410 hypothetical protein K06196 ccdA; cytochrome c-type biogenesis protein D ROLI_042310 dmsA_2; (GenBank) Dimethyl sulfoxide/trimethylamine N-oxide reductase K07812 torZ; trimethylamine-N-oxide reductase (cytochrome c) [EC:1.7.2.3] D ROLI_027020 dmsA_1; (GenBank) Dimethyl sulfoxide/trimethylamine N-oxide reductase K08351 bisC; biotin/methionine sulfoxide reductase [EC:1.-.-.-] D ROLI_039220 prsE_3; (GenBank) Type I secretion system membrane fusion protein PrsE K12537 hasE; membrane fusion protein, type I secretion system D ROLI_045360 prsE_4; (GenBank) Type I secretion system membrane fusion protein PrsE K12537 hasE; membrane fusion protein, type I secretion system D ROLI_016080 prsE_2; (GenBank) Type I secretion system membrane fusion protein PrsE K12542 lapC; membrane fusion protein, adhesin transport system D ROLI_044790 hlyD; (GenBank) Hemolysin secretion protein D, chromosomal K12542 lapC; membrane fusion protein, adhesin transport system D ROLI_025080 srpA; (GenBank) Solvent efflux pump periplasmic linker SrpA K18990 vexE; membrane fusion protein, multidrug efflux system D ROLI_044880 mdtA_4; (GenBank) Multidrug resistance protein MdtA K18990 vexE; membrane fusion protein, multidrug efflux system D ROLI_044430 hypothetical protein K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3] D ROLI_045200 hypothetical protein K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3] D ROLI_045190 hypothetical protein K25590 epsF; protein tyrosine kinase modulator D ROLI_002690 tspO; (GenBank) Tryptophan-rich sensory protein K05770 TSPO; translocator protein D ROLI_042430 pqiA_1; (GenBank) Intermembrane transport protein PqiA K03808 pqiA; intermembrane transport protein PqiA/LetA D ROLI_042440 pqiA_2; (GenBank) Intermembrane transport protein PqiA K03808 pqiA; intermembrane transport protein PqiA/LetA D ROLI_042450 hypothetical protein K06192 pqiB; intermembrane transport protein PqiB/LetB D ROLI_042460 hypothetical protein K09857 pqiC; intermembrane transport lipoprotein PqiC D ROLI_005840 hypothetical protein K16348 ecnB; entericidin B D ROLI_047470 hypothetical protein K16348 ecnB; entericidin B D ROLI_018410 ccmF; (GenBank) Cytochrome c-type biogenesis protein CcmF K02198 ccmF; cytochrome c-type biogenesis protein CcmF D ROLI_047440 srpB; (GenBank) Protein SrpB K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein D ROLI_002740 pucM; (GenBank) 5-hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17] D ROLI_029970 hypothetical protein K00389 yidH; inner membrane protein YidH D ROLI_037220 hypothetical protein K00389 yidH; inner membrane protein YidH D ROLI_006190 hypothetical protein K07245 pcoD; copper resistance protein D D ROLI_046430 hypothetical protein K07245 pcoD; copper resistance protein D D ROLI_006180 pcoC_1; (GenBank) Copper resistance protein C K07156 copC; copper resistance protein C D ROLI_046440 pcoC_2; (GenBank) Copper resistance protein C K07156 copC; copper resistance protein C C 02044 Secretion system [BR:rfu02044] D ROLI_025390 bepC_2; (GenBank) Outer membrane efflux protein BepC K12340 tolC; outer membrane protein D ROLI_001190 prsD_1; (GenBank) Type I secretion system ATP-binding protein PrsD K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase D ROLI_039210 prsD_2; (GenBank) Type I secretion system ATP-binding protein PrsD K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase D ROLI_045350 prsD_3; (GenBank) Type I secretion system ATP-binding protein PrsD K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase D ROLI_039220 prsE_3; (GenBank) Type I secretion system membrane fusion protein PrsE K12537 hasE; membrane fusion protein, type I secretion system D ROLI_045360 prsE_4; (GenBank) Type I secretion system membrane fusion protein PrsE K12537 hasE; membrane fusion protein, type I secretion system D ROLI_016090 apxIB_1; (GenBank) Toxin RTX-I translocation ATP-binding protein K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D ROLI_044800 btuD_9; (GenBank) Vitamin B12 import ATP-binding protein BtuD K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D ROLI_044810 apxIB_2; (GenBank) Toxin RTX-I translocation ATP-binding protein K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D ROLI_016080 prsE_2; (GenBank) Type I secretion system membrane fusion protein PrsE K12542 lapC; membrane fusion protein, adhesin transport system D ROLI_044790 hlyD; (GenBank) Hemolysin secretion protein D, chromosomal K12542 lapC; membrane fusion protein, adhesin transport system D ROLI_016100 bepC_1; (GenBank) Outer membrane efflux protein BepC K12543 lapE; outer membrane protein, adhesin transport system D ROLI_026080 hypothetical protein K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43] D ROLI_025990 hypothetical protein K02279 cpaB; pilus assembly protein CpaB D ROLI_026000 sctC; (GenBank) Type 3 secretion system secretin K02280 cpaC; pilus assembly protein CpaC D ROLI_026020 hypothetical protein K02282 cpaE; pilus assembly protein CpaE D ROLI_026030 hypothetical protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D ROLI_026040 hypothetical protein K12510 tadB; tight adherence protein B D ROLI_026050 hypothetical protein K12511 tadC; tight adherence protein C D ROLI_025000 hypothetical protein K12513 tadE; tight adherence protein E D ROLI_025970 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA D ROLI_025980 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA D ROLI_043280 hypothetical protein K02221 yggT; YggT family protein D ROLI_034340 flhA_2; (GenBank) Flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D ROLI_034360 flhB; (GenBank) Flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D ROLI_038610 fliF; (GenBank) Flagellar M-ring protein K02409 fliF; flagellar M-ring protein FliF D ROLI_038020 fliI; (GenBank) Flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D ROLI_038590 hypothetical protein K02417 fliN; flagellar motor switch protein FliN D ROLI_038580 fliP; (GenBank) Flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D ROLI_038060 hypothetical protein K02420 fliQ; flagellar biosynthesis protein FliQ D ROLI_034350 hypothetical protein K02421 fliR; flagellar biosynthesis protein FliR D ROLI_046830 hypothetical protein K03197 virB2; type IV secretion system protein VirB2 D ROLI_046820 hypothetical protein K03198 virB3; type IV secretion system protein VirB3 D ROLI_046810 virB4_2; (GenBank) Type IV secretion system protein virB4 K03199 virB4; type IV secretion system protein VirB4 [EC:7.4.2.8] D ROLI_046780 hypothetical protein K03200 virB5; type IV secretion system protein VirB5 D ROLI_046670 hypothetical protein K03201 virB6; type IV secretion system protein VirB6 D ROLI_046770 hypothetical protein K03203 virB8; type IV secretion system protein VirB8 D ROLI_046760 virB9; (GenBank) Protein virB9 K03204 virB9; type IV secretion system protein VirB9 D ROLI_046750 hypothetical protein K03195 virB10; type IV secretion system protein VirB10 D ROLI_046700 Type IV secretion system protein VirB11 K03196 virB11; type IV secretion system protein VirB11 [EC:7.4.2.8] D ROLI_047960 virD1; (GenBank) T-DNA border endonuclease VirD1 K18433 virD1; type IV secretion system T-DNA border endonuclease VirD1 D ROLI_046640 hypothetical protein K18434 virD2; type IV secretion system T-DNA border endonuclease VirD2 D ROLI_047950 hypothetical protein K18434 virD2; type IV secretion system T-DNA border endonuclease VirD2 D ROLI_046650 hypothetical protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8] D ROLI_047940 hypothetical protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8] D ROLI_014070 hypothetical protein K20527 trbB; type IV secretion system protein TrbB [EC:7.4.2.8] D ROLI_038240 hypothetical protein K20527 trbB; type IV secretion system protein TrbB [EC:7.4.2.8] D ROLI_014060 hypothetical protein K20528 trbC; type IV secretion system protein TrbC D ROLI_038230 hypothetical protein K20528 trbC; type IV secretion system protein TrbC D ROLI_014050 hypothetical protein K20529 trbD; type IV secretion system protein TrbD D ROLI_038220 hypothetical protein K20529 trbD; type IV secretion system protein TrbD D ROLI_014040 hypothetical protein K20530 trbE; type IV secretion system protein TrbE [EC:7.4.2.8] D ROLI_038210 virB4_1; (GenBank) Type IV secretion system protein virB4 K20530 trbE; type IV secretion system protein TrbE [EC:7.4.2.8] D ROLI_014030 hypothetical protein K20531 trbF; type IV secretion system protein TrbF D ROLI_014610 hypothetical protein K20531 trbF; type IV secretion system protein TrbF D ROLI_038170 hypothetical protein K20531 trbF; type IV secretion system protein TrbF D ROLI_014600 hypothetical protein K20532 trbG; type IV secretion system protein TrbG D ROLI_038160 hypothetical protein K20532 trbG; type IV secretion system protein TrbG D ROLI_014020 hypothetical protein K20533 trbI; type IV secretion system protein TrbI D ROLI_014590 hypothetical protein K20533 trbI; type IV secretion system protein TrbI D ROLI_038150 hypothetical protein K20533 trbI; type IV secretion system protein TrbI D ROLI_038200 hypothetical protein K20266 trbJ; type IV secretion system protein TrbJ D ROLI_014620 hypothetical protein K07344 trbL; type IV secretion system protein TrbL D ROLI_038180 hypothetical protein K07344 trbL; type IV secretion system protein TrbL D ROLI_006030 hcp1; (GenBank) Protein hcp1 K11903 hcp; type VI secretion system secreted protein Hcp D ROLI_043430 secA; (GenBank) Protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D ROLI_043970 secB; (GenBank) Protein-export protein SecB K03071 secB; preprotein translocase subunit SecB D ROLI_028010 secD; (GenBank) Protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D ROLI_035540 secE; (GenBank) Protein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D ROLI_028000 secF; (GenBank) Protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D ROLI_008180 hypothetical protein K03075 secG; preprotein translocase subunit SecG D ROLI_034090 secY; (GenBank) Protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D ROLI_036600 ffh; (GenBank) Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D ROLI_008440 ftsY; (GenBank) Signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor D ROLI_028020 yajC; (GenBank) Sec translocon accessory complex subunit YajC K03210 yajC; preprotein translocase subunit YajC D ROLI_033870 yidC; (GenBank) Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D ROLI_012640 tatA; (GenBank) Sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA D ROLI_012650 tatB; (GenBank) Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB D ROLI_012660 tatC; (GenBank) Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC C 02042 Bacterial toxins [BR:rfu02042] D ROLI_023590 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family C 02022 Two-component system [BR:rfu02022] D ROLI_020680 rcsC_2; (GenBank) Sensor histidine kinase RcsC K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D ROLI_020740 phoB; (GenBank) Phosphate regulon transcriptional regulatory protein PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D ROLI_024350 envZ; (GenBank) Osmolarity sensor protein EnvZ K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D ROLI_005420 ompR_1; (GenBank) Transcriptional regulatory protein OmpR K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR D ROLI_042320 arcA_2; (GenBank) Aerobic respiration control protein ArcA K07772 torR; two-component system, OmpR family, torCAD operon response regulator TorR D ROLI_004920 sasA_1; (GenBank) Adaptive-response sensory-kinase SasA K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3] D ROLI_004910 creB; (GenBank) Transcriptional regulatory protein CreB K14981 chvI; two-component system, OmpR family, response regulator ChvI D ROLI_041110 ompR_2; (GenBank) Transcriptional regulatory protein OmpR K02483 K02483; two-component system, OmpR family, response regulator D ROLI_022580 nreC; (GenBank) Oxygen regulatory protein NreC K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL D ROLI_022570 hypothetical protein K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3] D ROLI_021720 glnL; (GenBank) Sensory histidine kinase/phosphatase NtrB K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D ROLI_021710 ntrC; (GenBank) DNA-binding transcriptional regulator NtrC K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG D ROLI_021700 sasA_8; (GenBank) Adaptive-response sensory-kinase SasA K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D ROLI_021690 atoC; (GenBank) Regulatory protein AtoC K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX D ROLI_023850 dctB; (GenBank) C4-dicarboxylate transport sensor protein DctB K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3] D ROLI_022090 cheA; (GenBank) Chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D ROLI_022080 cheY_1; (GenBank) Chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D ROLI_022120 cheY_2; (GenBank) Chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D ROLI_030120 hypothetical protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D ROLI_010530 cheB2; (GenBank) Protein-glutamate methylesterase/protein-glutamine glutaminase 2 K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D ROLI_019650 cheB_2; (GenBank) Protein-glutamate methylesterase/protein-glutamine glutaminase K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61] D ROLI_014940 pleD; (GenBank) Response regulator PleD K02488 pleD; two-component system, cell cycle response regulator [EC:2.7.7.65] D ROLI_021230 rcsC_3; (GenBank) Sensor histidine kinase RcsC K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3] D ROLI_023290 ctrA; (GenBank) Cell cycle response regulator CtrA K13584 ctrA; two-component system, cell cycle response regulator CtrA D ROLI_044130 regB; (GenBank) Sensor histidine kinase RegB K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3] D ROLI_044150 regA; (GenBank) Photosynthetic apparatus regulatory protein RegA K15012 regA; two-component system, response regulator RegA C 02035 Bacterial motility proteins [BR:rfu02035] D ROLI_022090 cheA; (GenBank) Chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D ROLI_022100 cheW; (GenBank) Chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D ROLI_010540 cheD; (GenBank) Chemoreceptor glutamine deamidase CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D ROLI_022110 cheR; (GenBank) Chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D ROLI_010530 cheB2; (GenBank) Protein-glutamate methylesterase/protein-glutamine glutaminase 2 K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D ROLI_019650 cheB_2; (GenBank) Protein-glutamate methylesterase/protein-glutamine glutaminase K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61] D ROLI_022080 cheY_1; (GenBank) Chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D ROLI_022120 cheY_2; (GenBank) Chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D ROLI_030120 hypothetical protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D ROLI_000130 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D ROLI_014810 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D ROLI_015890 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D ROLI_042480 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D ROLI_048350 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D ROLI_038020 fliI; (GenBank) Flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D ROLI_038580 fliP; (GenBank) Flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D ROLI_038060 hypothetical protein K02420 fliQ; flagellar biosynthesis protein FliQ D ROLI_034350 hypothetical protein K02421 fliR; flagellar biosynthesis protein FliR D ROLI_034340 flhA_2; (GenBank) Flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D ROLI_034360 flhB; (GenBank) Flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D ROLI_027880 fliG; (GenBank) Flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D ROLI_017830 hypothetical protein K02416 fliM; flagellar motor switch protein FliM D ROLI_038590 hypothetical protein K02417 fliN; flagellar motor switch protein FliN D ROLI_038610 fliF; (GenBank) Flagellar M-ring protein K02409 fliF; flagellar M-ring protein FliF D ROLI_038940 flgI; (GenBank) Flagellar P-ring protein K02394 flgI; flagellar P-ring protein FlgI D ROLI_038090 hypothetical protein K02386 flgA; flagellar basal body P-ring formation protein FlgA D ROLI_038100 flgH; (GenBank) Flagellar L-ring protein K02393 flgH; flagellar L-ring protein FlgH D ROLI_038110 hypothetical protein K02415 fliL; flagellar protein FliL D ROLI_038620 hypothetical protein K02415 fliL; flagellar protein FliL D ROLI_038050 fliE; (GenBank) Flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE D ROLI_000660 hypothetical protein K02414 fliK; flagellar hook-length control protein FliK D ROLI_038030 hypothetical protein K02387 flgB; flagellar basal-body rod protein FlgB D ROLI_038040 flgC; (GenBank) Flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D ROLI_000650 hypothetical protein K02389 flgD; flagellar basal-body rod modification protein FlgD D ROLI_038070 flgG_1; (GenBank) Flagellar basal-body rod protein FlgG K02391 flgF; flagellar basal-body rod protein FlgF D ROLI_038080 flgG_2; (GenBank) Flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D ROLI_000670 hypothetical protein K02395 flgJ; peptidoglycan hydrolase FlgJ D ROLI_038910 flgE; (GenBank) Flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE D ROLI_038920 flgK; (GenBank) Flagellar hook-associated protein 1 K02396 flgK; flagellar hook-associated protein 1 D ROLI_038930 hypothetical protein K02397 flgL; flagellar hook-associated protein 3 FlgL D ROLI_000690 hypothetical protein K02406 fliC; flagellin D ROLI_038650 motA; (GenBank) Motility protein A K02556 motA; chemotaxis protein MotA D ROLI_038900 motB; (GenBank) Motility protein B K02557 motB; chemotaxis protein MotB D ROLI_000700 hypothetical protein K06602 flaF; flagellar biosynthesis activator protein FlaF D ROLI_000710 flbT; (GenBank) flagellum biosynthesis repressor protein FlbT K06601 flbT; flagellar biosynthesis repressor protein FlbT D ROLI_025970 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA D ROLI_025980 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA D ROLI_026080 hypothetical protein K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43] D ROLI_025990 hypothetical protein K02279 cpaB; pilus assembly protein CpaB D ROLI_026000 sctC; (GenBank) Type 3 secretion system secretin K02280 cpaC; pilus assembly protein CpaC D ROLI_026020 hypothetical protein K02282 cpaE; pilus assembly protein CpaE D ROLI_026030 hypothetical protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:rfu04812] D ROLI_036000 mreB; (GenBank) Cell shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D ROLI_011560 ftsZ; (GenBank) Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D ROLI_011550 ftsA; (GenBank) Cell division protein FtsA K03590 ftsA; cell division protein FtsA D ROLI_036750 Iron-sulfur cluster carrier protein K03496 parA; chromosome partitioning protein D ROLI_042240 hypothetical protein K03496 parA; chromosome partitioning protein D ROLI_043870 parA; (GenBank) Chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein D ROLI_046240 parA; (GenBank) partitioning protein ParA K03496 parA; chromosome partitioning protein D ROLI_047220 repA; (GenBank) replicase RepA K03496 parA; chromosome partitioning protein D ROLI_048150 soj; (GenBank) Chromosome-partitioning ATPase Soj K03496 parA; chromosome partitioning protein D ROLI_048410 virC1_3; (GenBank) Protein virC1 K03496 parA; chromosome partitioning protein D ROLI_033610 hypothetical protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D ROLI_043860 parB; (GenBank) Chromosome-partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D ROLI_046230 parB; (GenBank) partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D ROLI_046320 noc_1; (GenBank) Nucleoid occlusion protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D ROLI_047230 repB; (GenBank) replicase RepA K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D ROLI_047300 noc_3; (GenBank) Nucleoid occlusion protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:rfu04147] D ROLI_023800 fda; (GenBank) Fructose-bisphosphate aldolase class 1 K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D ROLI_019260 eno; (GenBank) Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D ROLI_017170 gapA; (GenBank) Glyceraldehyde-3-phosphate dehydrogenase 1 K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D ROLI_024180 gap; (GenBank) Glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D ROLI_024190 gap1; (GenBank) Glyceraldehyde-3-phosphate dehydrogenase 1 K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D ROLI_010970 pgk; (GenBank) Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D ROLI_003080 ttuE; (GenBank) Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D ROLI_035130 hypothetical protein K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D ROLI_040110 hypothetical protein K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D ROLI_007260 groL; (GenBank) 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D ROLI_043400 dnaK; (GenBank) Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D ROLI_021330 pgi; (GenBank) Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D ROLI_042410 gnl; (GenBank) Gluconolactonase K01053 gnl; gluconolactonase [EC:3.1.1.17] D ROLI_021250 guaB; (GenBank) Inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D ROLI_032790 tufA_1; (GenBank) Elongation factor Tu K02358 tuf; elongation factor Tu D ROLI_035400 tufA_2; (GenBank) Elongation factor Tu K02358 tuf; elongation factor Tu D ROLI_001750 Purine nucleoside phosphoramidase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D ROLI_000720 Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D ROLI_009700 mtoX; (GenBank) Methanethiol oxidase K17285 SELENBP1; methanethiol oxidase [EC:1.8.3.4] D ROLI_003450 thlA; (GenBank) Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ROLI_006990 phaA_1; (GenBank) Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ROLI_026880 phaA_2; (GenBank) Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ROLI_032500 fadA; (GenBank) Putative acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ROLI_045040 bktB; (GenBank) Beta-ketothiolase BktB K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ROLI_044180 ahcY; (GenBank) Adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D ROLI_034080 adk; (GenBank) Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D ROLI_025790 apt; (GenBank) Adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D ROLI_007630 argH; (GenBank) Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D ROLI_043760 argG; (GenBank) Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D ROLI_040200 N(G),N(G)-dimethylarginine dimethylaminohydrolase K01482 DDAH; dimethylargininase [EC:3.5.3.18] D ROLI_035710 dht; (GenBank) D-hydantoinase/dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D ROLI_029250 hypothetical protein K01555 FAH; fumarylacetoacetase [EC:3.7.1.2] D ROLI_017220 glgB; (GenBank) 1,4-alpha-glucan branching enzyme GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D ROLI_017100 glpK; (GenBank) Glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D ROLI_008050 puuA_1; (GenBank) Gamma-glutamylputrescine synthetase PuuA K01915 glnA; glutamine synthetase [EC:6.3.1.2] D ROLI_008070 puuA_2; (GenBank) Gamma-glutamylputrescine synthetase PuuA K01915 glnA; glutamine synthetase [EC:6.3.1.2] D ROLI_026690 glnA_1; (GenBank) Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D ROLI_027740 glnA_2; (GenBank) Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D ROLI_031410 ipuC; (GenBank) Glutamate--isopropylamine ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D ROLI_041750 glnT; (GenBank) Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D ROLI_021580 hemB; (GenBank) Delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D ROLI_001890 phhB; (GenBank) Putative pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D ROLI_044990 serA; (GenBank) D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D ROLI_003890 purH; (GenBank) Bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D ROLI_007740 lpd3; (GenBank) Dihydrolipoyl dehydrogenase 3 K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D ROLI_024290 lpd; (GenBank) Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D ROLI_026850 lpdA; (GenBank) Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D ROLI_005000 etfA; (GenBank) Electron transfer flavoprotein subunit alpha K03522 fixB; electron transfer flavoprotein alpha subunit D ROLI_024980 gdhA_1; (GenBank) Glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D ROLI_021350 zwf; (GenBank) Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D ROLI_019940 tpiA; (GenBank) Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D ROLI_014880 hypothetical protein K03098 APOD; apolipoprotein D and lipocalin family protein D ROLI_034610 blc; (GenBank) Outer membrane lipoprotein Blc K03098 APOD; apolipoprotein D and lipocalin family protein C 02048 Prokaryotic defense system [BR:rfu02048] D ROLI_005940 hypothetical protein K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D ROLI_037690 hypothetical protein K13581 ccrM; modification methylase [EC:2.1.1.72] D ROLI_048170 Modification methylase Eco57IB K07317 K07317; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D ROLI_048440 fokIM; (GenBank) Modification methylase FokI K07318 K07318; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D ROLI_021280 hhaIM; (GenBank) Modification methylase HhaI K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D ROLI_033210 dcm; (GenBank) DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D ROLI_040250 hypothetical protein K19163 ccdB; toxin CcdB D ROLI_038420 parE1; (GenBank) Toxin ParE1 K19092 parE1_3_4; toxin ParE1/3/4 D ROLI_038430 hypothetical protein K07746 parD1_3_4; antitoxin ParD1/3/4 D ROLI_048270 hypothetical protein K07746 parD1_3_4; antitoxin ParD1/3/4 D ROLI_011560 ftsZ; (GenBank) Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D ROLI_036000 mreB; (GenBank) Cell shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D ROLI_005060 parC; (GenBank) DNA topoisomerase 4 subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D ROLI_013240 parE; (GenBank) DNA topoisomerase 4 subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D ROLI_018450 gltX_1; (GenBank) Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D ROLI_035870 gltX1; (GenBank) Glutamate--tRNA ligase 1 K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D ROLI_006300 hypothetical protein K09159 cptB; antitoxin CptB D ROLI_021100 nifS; (GenBank) Cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D ROLI_047170 iscS; (GenBank) Cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules C 01504 Antimicrobial resistance genes [BR:rfu01504] D ROLI_032180 tetA; (GenBank) Tetracycline resistance protein, class C K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein D ROLI_004500 bepE; (GenBank) Efflux pump membrane transporter BepE K18138 acrB; multidrug efflux pump D ROLI_035940 bepG; (GenBank) Efflux pump membrane transporter BepG K18138 acrB; multidrug efflux pump D ROLI_009740 hmrR_1; (GenBank) HTH-type transcriptional regulator HmrR K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D ROLI_044290 hmrR_2; (GenBank) HTH-type transcriptional regulator HmrR K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D ROLI_025390 bepC_2; (GenBank) Outer membrane efflux protein BepC K12340 tolC; outer membrane protein C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:rfu00537] D ROLI_035130 hypothetical protein K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D ROLI_040110 hypothetical protein K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:rfu03100] D ROLI_001000 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D ROLI_002930 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D ROLI_001270 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D ROLI_002770 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D ROLI_005900 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D ROLI_040340 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D ROLI_024470 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D ROLI_022840 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D ROLI_025410 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D ROLI_032990 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D ROLI_012830 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D ROLI_008960 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D ROLI_009910 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D ROLI_021300 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D ROLI_024690 tRNA-His K14226 tRNA-His; tRNA His D ROLI_000990 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D ROLI_005110 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D ROLI_008840 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D ROLI_013190 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D ROLI_022220 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D ROLI_005670 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D ROLI_024010 tRNA-Met K14230 tRNA-Met; tRNA Met D ROLI_036930 tRNA-Met K14230 tRNA-Met; tRNA Met D ROLI_038130 tRNA-Met K14230 tRNA-Met; tRNA Met D ROLI_030440 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D ROLI_018650 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D ROLI_019050 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D ROLI_010330 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D ROLI_020030 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D ROLI_020270 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D ROLI_024120 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D ROLI_006110 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D ROLI_010780 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D ROLI_035550 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D ROLI_009760 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D ROLI_000860 tRNA-Val K14237 tRNA-Val; tRNA Val D ROLI_022880 tRNA-Val K14237 tRNA-Val; tRNA Val D ROLI_001020 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D ROLI_042390 gno_3; (GenBank) Gluconate 5-dehydrogenase K00046 idnO; gluconate 5-dehydrogenase [EC:1.1.1.69] D ROLI_014890 lcdH; (GenBank) L-carnitine dehydrogenase K27497 K27497; carnitine 3-dehydrogenase / betainyl-CoA thioesterase [EC:1.1.1.108 3.1.2.33] D ROLI_042400 idnD; (GenBank) L-idonate 5-dehydrogenase (NAD(P)(+)) K00098 idnD; L-idonate 5-dehydrogenase [EC:1.1.1.264] D ROLI_000250 hpsN_1; (GenBank) Sulfopropanediol 3-dehydrogenase K15509 hpsN; sulfopropanediol 3-dehydrogenase [EC:1.1.1.308] D ROLI_015440 hpsN_2; (GenBank) Sulfopropanediol 3-dehydrogenase K15509 hpsN; sulfopropanediol 3-dehydrogenase [EC:1.1.1.308] D ROLI_032280 hpsN_3; (GenBank) Sulfopropanediol 3-dehydrogenase K15509 hpsN; sulfopropanediol 3-dehydrogenase [EC:1.1.1.308] D ROLI_007610 D-altritol 5-dehydrogenase K21616 znd; D-altritol 5-dehydrogenase [EC:1.1.1.407] D ROLI_004140 denD; (GenBank) D-erythronate dehydrogenase K22025 denD; D-erythronate 2-dehydrogenase [EC:1.1.1.410] D ROLI_015620 ltnD; (GenBank) L-threonate dehydrogenase K08319 ltnD; L-threonate 2-dehydrogenase [EC:1.1.1.411] D ROLI_015600 apsD; (GenBank) D-apiose dehydrogenase K23244 apsD; D-apiose dehydrogenase [EC:1.1.1.420] D ROLI_010820 ydhF; (GenBank) Oxidoreductase YdhF K26057 smoB; 6-dehydroglucose reductase [EC:1.1.1.432] D ROLI_000310 yliI_1; (GenBank) Aldose sugar dehydrogenase YliI K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-] D ROLI_020600 yliI_2; (GenBank) Aldose sugar dehydrogenase YliI K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-] D ROLI_004570 qheDH; (GenBank) Quinohemoprotein alcohol dehydrogenase K17760 qheDH; quinohemoprotein ethanol dehydrogenase [EC:1.1.9.1] D ROLI_016400 gap3; (GenBank) Glyceraldehyde-3-phosphate dehydrogenase 3 K25224 gapdh; glyceraldehyde-3-phosphate dehydrogenase (arsenate-transferring) [EC:1.2.1.107] D ROLI_027410 tgnC; (GenBank) (Z)-2-((N-methylformamido)methylene)-5-hydroxybutyrolactone dehydrogenase K23463 tgnC; (Z)-2-((N-methylformamido)methylene)-5-hydroxybutyrolactone dehydrogenase [EC:1.2.1.-] D ROLI_019780 coxS; (GenBank) Carbon monoxide dehydrogenase small chain K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3] D ROLI_019800 coxM; (GenBank) Carbon monoxide dehydrogenase medium chain K03519 coxM; aerobic carbon-monoxide dehydrogenase medium subunit [EC:1.2.5.3] D ROLI_019790 cutL_1; (GenBank) Carbon monoxide dehydrogenase large chain K03520 coxL; aerobic carbon-monoxide dehydrogenase large subunit [EC:1.2.5.3] D ROLI_025250 cutL_2; (GenBank) Carbon monoxide dehydrogenase large chain K03520 coxL; aerobic carbon-monoxide dehydrogenase large subunit [EC:1.2.5.3] D ROLI_018340 hypothetical protein K04090 E1.2.7.8; indolepyruvate ferredoxin oxidoreductase [EC:1.2.7.8] D ROLI_038970 fadH; (GenBank) 2,4-dienoyl-CoA reductase K00219 fadH; 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34] D ROLI_042210 pqqCD; (GenBank) Bifunctional coenzyme PQQ synthesis protein C/D K06137 pqqC; pyrroloquinoline-quinone synthase [EC:1.3.3.11] D ROLI_022900 iorA; (GenBank) Isoquinoline 1-oxidoreductase subunit alpha K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16] D ROLI_022910 iorB_2; (GenBank) Isoquinoline 1-oxidoreductase subunit beta K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16] D ROLI_012950 stcD; (GenBank) putative N-methylproline demethylase K22551 hpbA; N-methyl-L-proline demethylase [EC:1.5.3.-] D ROLI_006880 Electron transfer flavoprotein-ubiquinone oxidoreductase K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1] D ROLI_003300 qorA_2; (GenBank) Quinone oxidoreductase 1 K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D ROLI_032980 qorA_3; (GenBank) Quinone oxidoreductase 1 K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D ROLI_034850 adhT; (GenBank) Alcohol dehydrogenase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D ROLI_005220 msrA3; (GenBank) Peptide methionine sulfoxide reductase MsrA 3 K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D ROLI_043780 msrA2; (GenBank) Peptide methionine sulfoxide reductase MsrA 2 K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D ROLI_005230 msrB; (GenBank) Peptide methionine sulfoxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] D ROLI_000830 yghU; (GenBank) Disulfide-bond oxidoreductase YghU K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-] D ROLI_003210 yfcG_1; (GenBank) Disulfide-bond oxidoreductase YfcG K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-] D ROLI_008480 yfcG_2; (GenBank) Disulfide-bond oxidoreductase YfcG K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-] D ROLI_004420 yqjG; (GenBank) Glutathionyl-hydroquinone reductase YqjG K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7] D ROLI_000940 msrP; (GenBank) Protein-methionine-sulfoxide reductase catalytic subunit MsrP K07147 msrP; methionine sulfoxide reductase catalytic subunit [EC:1.8.-.-] D ROLI_017280 hypothetical protein K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5] D ROLI_024340 bcp; (GenBank) Putative peroxiredoxin bcp K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D ROLI_003670 Peroxiredoxin K24158 prx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D ROLI_012880 hypothetical protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D ROLI_041660 hypothetical protein K22342 dmmA; dimethylamine monooxygenase subunit A [EC:1.14.13.238] D ROLI_041670 cntB; (GenBank) Carnitine monooxygenase reductase subunit K22343 dmmB; dimethylamine monooxygenase subunit B [EC:1.14.13.238] D ROLI_041680 hypothetical protein K22344 dmmC; dimethylamine monooxygenase subunit C [EC:1.14.13.238] D ROLI_010810 msuD; (GenBank) Methanesulfonate monooxygenase K26058 smoC; sulfoquinovose monooxygenase [EC:1.14.14.181] D ROLI_027420 tgnB; (GenBank) Flavin-dependent trigonelline monooxygenase, oxygenase component K23464 tgnB; flavin-dependent trigonelline monooxygenase, oxygenase component [EC:1.14.14.-] D ROLI_019830 fpr; (GenBank) Flavodoxin/ferredoxin--NADP reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D ROLI_042230 pqqE; (GenBank) PqqA peptide cyclase K06139 pqqE; PqqA peptide cyclase [EC:1.21.98.4] D ROLI_012690 pcm_1; (GenBank) Protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D ROLI_025400 pcm_2; (GenBank) Protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D ROLI_020210 ufaA1; (GenBank) Tuberculostearic acid methyltransferase UfaA1 K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D ROLI_019970 maa; (GenBank) Maltose O-acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79] D ROLI_032760 Beta-ketodecanoyl-[acyl-carrier-protein] synthase K16872 E2.3.1.207; beta-ketodecanoyl-[acyl-carrier-protein] synthase [EC:2.3.1.207] D ROLI_032020 lnt; (GenBank) Apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D ROLI_020410 hypothetical protein K22617 olsA; lyso-ornithine lipid O-acyltransferase [EC:2.3.1.270] D ROLI_014870 kce_1; (GenBank) 3-keto-5-aminohexanoate cleavage enzyme K27837 cdhC; 3-dehydrocarnitine:acetyl-CoA trimethylamine transferase [EC:2.3.1.317] D ROLI_020550 ysnE; (GenBank) putative N-acetyltransferase YsnE K03829 yedL; putative acetyltransferase [EC:2.3.1.-] D ROLI_020500 fabF_1; (GenBank) 3-oxoacyl-[acyl-carrier-protein] synthase 2 K14660 nodE; nodulation protein E [EC:2.3.1.-] D ROLI_029020 L-methionine sulfoximine/L-methionine sulfone acetyltransferase K24217 mnaT; L-amino acid N-acyltransferase [EC:2.3.1.-] D ROLI_017700 aat; (GenBank) Leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6] D ROLI_022440 bpt; (GenBank) Aspartate/glutamate leucyltransferase K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29] D ROLI_041560 ggpS; (GenBank) Glucosylglycerol-phosphate synthase K03692 E2.4.1.213; glucosylglycerol-phosphate synthase [EC:2.4.1.213] D ROLI_007430 lgt; (GenBank) Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D ROLI_002200 hypothetical protein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D ROLI_015630 otnK; (GenBank) 3-oxo-tetronate kinase K21948 otnK; 3-dehydrotetronate 4-kinase [EC:2.7.1.217] D ROLI_022410 glnE; (GenBank) Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89] D ROLI_025500 hypothetical protein K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D ROLI_019320 selO; (GenBank) Protein adenylyltransferase SelO K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108] D ROLI_021320 hypothetical protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D ROLI_026250 ybgC; (GenBank) Acyl-CoA thioesterase YbgC K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D ROLI_033930 hypothetical protein K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-] D ROLI_014370 betC_1; (GenBank) Choline-sulfatase K01133 betC; choline-sulfatase [EC:3.1.6.6] D ROLI_029300 betC_2; (GenBank) Choline-sulfatase K01133 betC; choline-sulfatase [EC:3.1.6.6] D ROLI_010280 ycfH; (GenBank) putative metal-dependent hydrolase YcfH K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D ROLI_032710 ybfF; (GenBank) Esterase YbfF K01175 ybfF; esterase [EC:3.1.-.-] D ROLI_037010 hypothetical protein K01286 E3.4.16.4; D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4] D ROLI_009210 amiD_1; (GenBank) N-acetylmuramoyl-L-alanine amidase AmiD K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D ROLI_042800 dag; (GenBank) N-acyl-D-glutamate deacylase K06015 E3.5.1.81; N-acyl-D-amino-acid deacylase [EC:3.5.1.81] D ROLI_004450 def_1; (GenBank) Peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D ROLI_004460 def_2; (GenBank) Peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D ROLI_004470 def1; (GenBank) Peptide deformylase 1 K01462 PDF; peptide deformylase [EC:3.5.1.88] D ROLI_043560 nit1; (GenBank) Deaminated glutathione amidase K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128] D ROLI_027440 tgnD; (GenBank) (E)-2-((N-methylformamido)methylene)succinate hydrolase K23465 tgnD; (E)-2-((N-methylformamido)methylene)succinate hydrolase [EC:3.5.1.-] D ROLI_009320 8-oxoguanine deaminase K18456 E3.5.4.32; 8-oxoguanine deaminase [EC:3.5.4.32] D ROLI_044280 actP; (GenBank) Copper-transporting P-type ATPase K19597 golT; Au+-exporting ATPase [EC:3.6.1.-] D ROLI_042120 ravA; (GenBank) ATPase RavA K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D ROLI_042950 hypothetical protein K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D ROLI_036350 bcd_2; (GenBank) Acyl-CoA dehydrogenase, short-chain specific K19966 acdDPN7; 3-sulfinopropanoyl-CoA desulfinase [EC:3.13.1.4] D ROLI_015640 otnC; (GenBank) 3-oxo-tetronate 4-phosphate decarboxylase K22130 otnC; 3-dehydro-4-phosphotetronate decarboxylase [EC:4.1.1.104] D ROLI_004080 uxaA; (GenBank) Altronate dehydratase K26399 K26399; arabinonate dehydratase [EC:4.2.1.5] D ROLI_005360 caiD; (GenBank) Carnitinyl-CoA dehydratase K08299 caiD; crotonobetainyl-CoA hydratase [EC:4.2.1.149] D ROLI_016160 dpaL; (GenBank) Diaminopropionate ammonia-lyase K01751 E4.3.1.15; diaminopropionate ammonia-lyase [EC:4.3.1.15] D ROLI_016340 fucU; (GenBank) L-fucose mutarotase K02431 fucU; L-fucose mutarotase [EC:5.1.3.29] D ROLI_027190 L-ribulose 3-epimerase K18910 dpe; D-psicose/D-tagatose/L-ribulose 3-epimerase [EC:5.1.3.30 5.1.3.31] D ROLI_027620 rhaM_2; (GenBank) L-rhamnose mutarotase K03534 rhaM; L-rhamnose mutarotase [EC:5.1.3.32] D ROLI_015650 otnI; (GenBank) 2-oxo-tetronate isomerase K22131 otnI; 2-dehydrotetronate isomerase [EC:5.3.1.35] D ROLI_042930 hyi; (GenBank) Hydroxypyruvate isomerase K22131 otnI; 2-dehydrotetronate isomerase [EC:5.3.1.35] D ROLI_037030 copA; (GenBank) Copper-exporting P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9] C 99981 Carbohydrate metabolism D ROLI_040740 hypothetical protein K04768 acuC; acetoin utilization protein AcuC D ROLI_026830 lutA_2; (GenBank) Lactate utilization protein A K18928 lldE; L-lactate dehydrogenase complex protein LldE D ROLI_026820 lutB; (GenBank) Lactate utilization protein B K18929 lldF; L-lactate dehydrogenase complex protein LldF D ROLI_026810 lutC; (GenBank) Lactate utilization protein C K00782 lldG; L-lactate dehydrogenase complex protein LldG C 99982 Energy metabolism D ROLI_030950 fdhD; (GenBank) Sulfur carrier protein FdhD K02379 fdhD; FdhD protein D ROLI_024550 fdxA; (GenBank) Ferredoxin-2 K05524 fdxA; ferredoxin D ROLI_002140 hypothetical protein K02448 norD; nitric oxide reductase NorD protein D ROLI_002150 ctaE_1; (GenBank) Cytochrome c oxidase subunit 3 K02164 norE; nitric oxide reductase NorE protein D ROLI_002130 nirQ; (GenBank) Denitrification regulatory protein NirQ K04748 norQ; nitric oxide reductase NorQ protein D ROLI_005010 etfB; (GenBank) Electron transfer flavoprotein subunit beta K03521 fixA; electron transfer flavoprotein beta subunit D ROLI_002060 hypothetical protein K19344 nirC; cytochrome c55X D ROLI_002050 hypothetical protein K19345 nirF; protein NirF C 99983 Lipid metabolism C 99984 Nucleotide metabolism C 99985 Amino acid metabolism D ROLI_036260 hypothetical protein K06203 cysZ; CysZ protein D ROLI_037430 Pyridoxal phosphate homeostasis protein K06997 yggS; PLP dependent protein C 99986 Glycan metabolism D ROLI_037970 hypothetical protein K07027 K07027; glycosyltransferase 2 family protein D ROLI_046110 hypothetical protein K07027 K07027; glycosyltransferase 2 family protein C 99987 Cofactor metabolism D ROLI_011060 yjiA_1; (GenBank) P-loop guanosine triphosphatase YjiA K02234 cobW; cobalamin biosynthesis protein CobW D ROLI_044270 lapB; (GenBank) Lipopolysaccharide assembly protein B K02498 hemY; HemY protein D ROLI_002010 mftC; (GenBank) Putative mycofactocin radical SAM maturase MftC K24868 nirJ; heme d1 biosynthesis protein D ROLI_045050 ubiB; (GenBank) protein kinase UbiB K03688 ubiB; ubiquinone biosynthesis protein D ROLI_030930 mobB; (GenBank) Molybdopterin-guanine dinucleotide biosynthesis adapter protein K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein D ROLI_002630 Soluble epoxide hydrolase K06049 bchO; magnesium chelatase accessory protein D ROLI_003280 hypothetical protein K18587 COQ9; ubiquinone biosynthesis protein COQ9 D ROLI_021790 pasT; (GenBank) Persistence and stress-resistance toxin PasT K18588 COQ10; coenzyme Q-binding protein COQ10 C 99988 Secondary metabolism D ROLI_035900 hypothetical protein K03932 lpqC; polyhydroxybutyrate depolymerase D ROLI_039500 NAD(P)H-dependent FMN reductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone) C 99999 Others D ROLI_006350 hypothetical protein K15977 K15977; putative oxidoreductase D ROLI_007120 hypothetical protein K06999 K06999; phospholipase/carboxylesterase D ROLI_018830 hypothetical protein K06999 K06999; phospholipase/carboxylesterase B B 09192 Unclassified: genetic information processing C 99973 Transcription D ROLI_006330 cspA_1; (GenBank) Cold shock protein CspA K03704 cspA; cold shock protein D ROLI_018630 hypothetical protein K03704 cspA; cold shock protein D ROLI_035640 cspA_2; (GenBank) Cold shock protein CspA K03704 cspA; cold shock protein D ROLI_035780 cspA_3; (GenBank) Cold shock protein CspA K03704 cspA; cold shock protein C 99974 Translation D ROLI_024610 hypothetical protein K07577 K07577; putative mRNA 3-end processing factor C 99975 Protein processing D ROLI_036990 clpS; (GenBank) ATP-dependent Clp protease adapter protein ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS D ROLI_028860 tig; (GenBank) Trigger factor K03545 tig; trigger factor D ROLI_000960 msrQ_1; (GenBank) Protein-methionine-sulfoxide reductase heme-binding subunit MsrQ K17247 msrQ; methionine sulfoxide reductase heme-binding subunit D ROLI_015500 ureE1; (GenBank) Urease accessory protein UreE 1 K03187 ureE; urease accessory protein D ROLI_015490 ureF; (GenBank) Urease accessory protein UreF K03188 ureF; urease accessory protein D ROLI_015480 ureG; (GenBank) Urease accessory protein UreG K03189 ureG; urease accessory protein D ROLI_015560 ureD; (GenBank) Urease accessory protein UreD K03190 ureD; urease accessory protein D ROLI_001780 smpB; (GenBank) SsrA-binding protein K03664 smpB; SsrA-binding protein D ROLI_036150 comM; (GenBank) Competence protein ComM K07391 comM; magnesium chelatase family protein D ROLI_019760 paoD; (GenBank) Molybdenum cofactor insertion chaperone PaoD K07402 xdhC; xanthine dehydrogenase accessory factor D ROLI_033780 hypothetical protein K07402 xdhC; xanthine dehydrogenase accessory factor C 99976 Replication and repair D ROLI_034400 hypothetical protein K03630 radC; DNA repair protein RadC D ROLI_004010 hypothetical protein K09760 rmuC; DNA recombination protein RmuC D ROLI_036170 hypothetical protein K07460 yraN; putative endonuclease D ROLI_025920 hypothetical protein K04096 smf; DNA processing protein D ROLI_034020 rarA; (GenBank) Replication-associated recombination protein A K07478 ycaJ; putative ATPase D ROLI_045590 Tn3 family transposase ISYps3 K14060 pinR; putative DNA-invertase from lambdoid prophage Rac D ROLI_020750 hypothetical protein K07482 K07482; transposase, IS30 family D ROLI_033570 hypothetical protein K07482 K07482; transposase, IS30 family D ROLI_043330 hypothetical protein K07482 K07482; transposase, IS30 family D ROLI_045640 IS30 family transposase ISRssp4 K07482 K07482; transposase, IS30 family D ROLI_047030 IS30 family transposase ISRssp4 K07482 K07482; transposase, IS30 family D ROLI_047040 IS30 family transposase ISRssp4 K07482 K07482; transposase, IS30 family D ROLI_005970 hypothetical protein K07483 K07483; transposase D ROLI_007020 IS3 family transposase ISRosp1 K07483 K07483; transposase D ROLI_010350 hypothetical protein K07483 K07483; transposase D ROLI_011220 hypothetical protein K07483 K07483; transposase D ROLI_012070 hypothetical protein K07483 K07483; transposase D ROLI_012180 hypothetical protein K07483 K07483; transposase D ROLI_013110 hypothetical protein K07483 K07483; transposase D ROLI_014270 hypothetical protein K07483 K07483; transposase D ROLI_014640 hypothetical protein K07483 K07483; transposase D ROLI_017880 hypothetical protein K07483 K07483; transposase D ROLI_018890 hypothetical protein K07483 K07483; transposase D ROLI_019190 IS3 family transposase ISRosp1 K07483 K07483; transposase D ROLI_021000 IS3 family transposase ISRosp1 K07483 K07483; transposase D ROLI_021900 hypothetical protein K07483 K07483; transposase D ROLI_022520 IS3 family transposase ISRosp1 K07483 K07483; transposase D ROLI_023120 hypothetical protein K07483 K07483; transposase D ROLI_025630 hypothetical protein K07483 K07483; transposase D ROLI_026970 hypothetical protein K07483 K07483; transposase D ROLI_027640 IS3 family transposase ISRosp1 K07483 K07483; transposase D ROLI_029440 hypothetical protein K07483 K07483; transposase D ROLI_030160 hypothetical protein K07483 K07483; transposase D ROLI_032830 hypothetical protein K07483 K07483; transposase D ROLI_032850 Insertion element IS6110 uncharacterized 12.0 kDa protein K07483 K07483; transposase D ROLI_032910 hypothetical protein K07483 K07483; transposase D ROLI_033040 hypothetical protein K07483 K07483; transposase D ROLI_033640 hypothetical protein K07483 K07483; transposase D ROLI_038250 hypothetical protein K07483 K07483; transposase D ROLI_038280 hypothetical protein K07483 K07483; transposase D ROLI_040300 IS3 family transposase ISRosp1 K07483 K07483; transposase D ROLI_042630 IS3 family transposase ISRosp1 K07483 K07483; transposase D ROLI_042650 hypothetical protein K07483 K07483; transposase D ROLI_045210 hypothetical protein K07483 K07483; transposase D ROLI_045460 hypothetical protein K07483 K07483; transposase D ROLI_045730 hypothetical protein K07483 K07483; transposase D ROLI_045960 hypothetical protein K07483 K07483; transposase D ROLI_046730 hypothetical protein K07483 K07483; transposase D ROLI_047270 hypothetical protein K07483 K07483; transposase D ROLI_047460 hypothetical protein K07483 K07483; transposase D ROLI_047550 hypothetical protein K07483 K07483; transposase D ROLI_047800 hypothetical protein K07483 K07483; transposase D ROLI_048210 hypothetical protein K07483 K07483; transposase D ROLI_048250 hypothetical protein K07483 K07483; transposase D ROLI_000120 hypothetical protein K07484 K07484; transposase D ROLI_003370 hypothetical protein K07484 K07484; transposase D ROLI_012080 hypothetical protein K07484 K07484; transposase D ROLI_012170 hypothetical protein K07484 K07484; transposase D ROLI_028220 hypothetical protein K07484 K07484; transposase D ROLI_030100 hypothetical protein K07484 K07484; transposase D ROLI_038260 hypothetical protein K07484 K07484; transposase D ROLI_038270 IS66 family transposase ISAzs21 K07484 K07484; transposase D ROLI_038290 hypothetical protein K07484 K07484; transposase D ROLI_038300 IS66 family transposase ISPye33 K07484 K07484; transposase D ROLI_042660 hypothetical protein K07484 K07484; transposase D ROLI_042670 IS66 family transposase ISPye33 K07484 K07484; transposase D ROLI_045710 IS66 family transposase ISPye33 K07484 K07484; transposase D ROLI_045720 hypothetical protein K07484 K07484; transposase D ROLI_046710 IS66 family transposase ISPye33 K07484 K07484; transposase D ROLI_046720 hypothetical protein K07484 K07484; transposase D ROLI_047810 hypothetical protein K07484 K07484; transposase D ROLI_047820 IS66 family transposase ISPye33 K07484 K07484; transposase D ROLI_048100 hypothetical protein K07484 K07484; transposase D ROLI_048190 IS66 family transposase ISPye33 K07484 K07484; transposase D ROLI_048200 hypothetical protein K07484 K07484; transposase D ROLI_027000 IS110 family transposase ISMch6 K07486 K07486; transposase D ROLI_031230 IS110 family transposase ISMch6 K07486 K07486; transposase D ROLI_033090 IS110 family transposase ISRhru3 K07486 K07486; transposase D ROLI_033170 IS110 family transposase ISMlo3 K07486 K07486; transposase D ROLI_004320 IS200/IS605 family transposase ISPlu2 K07491 rayT; REP-associated tyrosine transposase D ROLI_004340 hypothetical protein K07491 rayT; REP-associated tyrosine transposase D ROLI_011770 rayT; (GenBank) REP-associated tyrosine transposase K07491 rayT; REP-associated tyrosine transposase D ROLI_032690 IS200/IS605 family transposase ISW1 K07491 rayT; REP-associated tyrosine transposase D ROLI_036460 IS200/IS605 family transposase ISPlu2 K07491 rayT; REP-associated tyrosine transposase D ROLI_037290 IS200/IS605 family transposase ISPlu2 K07491 rayT; REP-associated tyrosine transposase D ROLI_038410 IS200/IS605 family transposase ISPlu2 K07491 rayT; REP-associated tyrosine transposase D ROLI_041210 hypothetical protein K07491 rayT; REP-associated tyrosine transposase D ROLI_045680 IS200/IS605 family transposase ISW1 K07491 rayT; REP-associated tyrosine transposase D ROLI_000160 hypothetical protein K07497 K07497; putative transposase D ROLI_001040 hypothetical protein K07497 K07497; putative transposase D ROLI_002910 IS3 family transposase ISSusp2 K07497 K07497; putative transposase D ROLI_005980 IS3 family transposase ISRhba2 K07497 K07497; putative transposase D ROLI_009230 IS3 family transposase ISRosp2 K07497 K07497; putative transposase D ROLI_009240 IS3 family transposase ISRosp2 K07497 K07497; putative transposase D ROLI_009930 hypothetical protein K07497 K07497; putative transposase D ROLI_010900 IS3 family transposase ISMch1 K07497 K07497; putative transposase D ROLI_013100 IS3 family transposase ISRhba2 K07497 K07497; putative transposase D ROLI_013210 hypothetical protein K07497 K07497; putative transposase D ROLI_013280 IS3 family transposase ISRosp5 K07497 K07497; putative transposase D ROLI_014260 IS3 family transposase ISRhba2 K07497 K07497; putative transposase D ROLI_014280 IS3 family transposase ISMamg1 K07497 K07497; putative transposase D ROLI_014290 IS3 family transposase ISXau1 K07497 K07497; putative transposase D ROLI_014630 IS3 family transposase ISRhba2 K07497 K07497; putative transposase D ROLI_016270 IS3 family transposase ISMch1 K07497 K07497; putative transposase D ROLI_017870 IS3 family transposase ISRhba2 K07497 K07497; putative transposase D ROLI_020050 hypothetical protein K07497 K07497; putative transposase D ROLI_020970 hypothetical protein K07497 K07497; putative transposase D ROLI_021910 IS3 family transposase ISRhba2 K07497 K07497; putative transposase D ROLI_022610 IS3 family transposase ISMch1 K07497 K07497; putative transposase D ROLI_023130 IS3 family transposase ISRhba2 K07497 K07497; putative transposase D ROLI_025620 IS3 family transposase ISRhba2 K07497 K07497; putative transposase D ROLI_026610 IS3 family transposase ISRosp5 K07497 K07497; putative transposase D ROLI_030170 IS3 family transposase ISRhba2 K07497 K07497; putative transposase D ROLI_031670 hypothetical protein K07497 K07497; putative transposase D ROLI_031680 IS3 family transposase ISRosp2 K07497 K07497; putative transposase D ROLI_032820 IS3 family transposase ISRhba2 K07497 K07497; putative transposase D ROLI_033030 IS3 family transposase ISRhba2 K07497 K07497; putative transposase D ROLI_033650 IS3 family transposase ISRhba2 K07497 K07497; putative transposase D ROLI_034300 IS3 family transposase ISMch1 K07497 K07497; putative transposase D ROLI_034930 IS3 family transposase ISRosp2 K07497 K07497; putative transposase D ROLI_034940 IS3 family transposase ISRosp2 K07497 K07497; putative transposase D ROLI_038670 IS3 family transposase ISRosp2 K07497 K07497; putative transposase D ROLI_038760 IS3 family transposase ISRosp2 K07497 K07497; putative transposase D ROLI_038950 IS3 family transposase ISRosp2 K07497 K07497; putative transposase D ROLI_038960 hypothetical protein K07497 K07497; putative transposase D ROLI_044820 hypothetical protein K07497 K07497; putative transposase D ROLI_045220 IS3 family transposase ISRhba2 K07497 K07497; putative transposase D ROLI_045470 IS3 family transposase ISRhba2 K07497 K07497; putative transposase D ROLI_045500 hypothetical protein K07497 K07497; putative transposase D ROLI_045810 hypothetical protein K07497 K07497; putative transposase D ROLI_045840 IS3 family transposase ISSusp2 K07497 K07497; putative transposase D ROLI_045970 IS3 family transposase ISRhba2 K07497 K07497; putative transposase D ROLI_047280 IS3 family transposase ISRhba2 K07497 K07497; putative transposase D ROLI_047450 IS3 family transposase ISRhba2 K07497 K07497; putative transposase D ROLI_047560 IS3 family transposase ISRhba2 K07497 K07497; putative transposase D ROLI_047840 hypothetical protein K07497 K07497; putative transposase D ROLI_048260 IS3 family transposase ISRhba2 K07497 K07497; putative transposase D ROLI_000300 IS6 family transposase ISPmar1 K07498 K07498; putative transposase D ROLI_042470 IS6 family transposase ISPmar1 K07498 K07498; putative transposase D ROLI_042580 IS6 family transposase ISPmar1 K07498 K07498; putative transposase D ROLI_042620 IS6 family transposase ISPmar1 K07498 K07498; putative transposase D ROLI_042700 IS6 family transposase ISPmar1 K07498 K07498; putative transposase D ROLI_044940 IS6 family transposase ISPmar1 K07498 K07498; putative transposase C 99979 Viral proteins C 99998 Others D ROLI_037240 ybaB; (GenBank) Nucleoid-associated protein YbaB K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D ROLI_040700 yfdC; (GenBank) Inner membrane protein YfdC K21990 yfdC; formate-nitrite transporter family protein D ROLI_004250 hypothetical protein K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family D ROLI_021980 alsT; (GenBank) Amino-acid carrier protein AlsT K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family C 99978 Cell growth D ROLI_008460 yciB; (GenBank) intracellular septation protein A K06190 ispZ; intracellular septation protein D ROLI_010610 hypothetical protein K06400 spoIVCA; site-specific DNA recombinase D ROLI_013180 hypothetical protein K06400 spoIVCA; site-specific DNA recombinase D ROLI_039950 hypothetical protein K22719 envC; murein hydrolase activator C 99993 Cell motility C 99995 Signaling proteins D ROLI_003150 uspF; (GenBank) Universal stress protein F K14061 uspF; universal stress protein F D ROLI_021190 typA; (GenBank) GTP-binding protein TypA/BipA K06207 typA; GTP-binding protein D ROLI_004210 chrR; (GenBank) Anti-sigma-E factor ChrR K07167 chrR; putative transcriptional regulator D ROLI_032050 ybeZ; (GenBank) PhoH-like protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins C 99992 Structural proteins D ROLI_001850 mlaA; (GenBank) Intermembrane phospholipid transport system lipoprotein MlaA K04754 mlaA; phospholipid-binding lipoprotein MlaA D ROLI_030730 hypothetical protein K07289 asmA; AsmA protein D ROLI_001200 prsE_1; (GenBank) Type I secretion system membrane fusion protein PrsE K02022 ABC.MR.TX; HlyD family secretion protein D ROLI_018380 ccmE; (GenBank) Cytochrome c-type biogenesis protein CcmE K02197 ccmE; cytochrome c-type biogenesis protein CcmE D ROLI_018420 ccmH; (GenBank) Cytochrome c-type biogenesis protein CcmH K02200 ccmH; cytochrome c-type biogenesis protein CcmH D ROLI_025180 hypothetical protein K02200 ccmH; cytochrome c-type biogenesis protein CcmH C 99994 Others D ROLI_020730 phoU; (GenBank) Phosphate-specific transport system accessory protein PhoU K02039 phoU; phosphate transport system protein D ROLI_027540 mdoG_1; (GenBank) Glucans biosynthesis protein G K03670 mdoG; periplasmic glucans biosynthesis protein D ROLI_030640 mdoG_2; (GenBank) Glucans biosynthesis protein G K03670 mdoG; periplasmic glucans biosynthesis protein D ROLI_034580 cutA; (GenBank) Divalent-cation tolerance protein CutA K03926 cutA; periplasmic divalent cation tolerance protein D ROLI_020920 phnK; (GenBank) Putative phosphonates utilization ATP-binding protein PhnK K05781 phnK; putative phosphonate transport system ATP-binding protein D ROLI_002240 nosD; (GenBank) putative ABC transporter binding protein NosD K07218 nosD; nitrous oxidase accessory protein D ROLI_009530 hypothetical protein K07222 K07222; putative flavoprotein involved in K+ transport D ROLI_020110 hypothetical protein K07231 K07231; putative iron-regulated protein D ROLI_002280 hypothetical protein K07234 K07234; uncharacterized protein involved in response to NO D ROLI_002210 nosL; (GenBank) Copper-binding lipoprotein NosL K19342 nosL; copper chaperone NosL B B 09194 Poorly characterized C 99996 General function prediction only D ROLI_012750 hypothetical protein K03558 cvpA; membrane protein required for colicin V production D ROLI_042200 pqqB; (GenBank) Coenzyme PQQ synthesis protein B K06136 pqqB; pyrroloquinoline quinone biosynthesis protein B D ROLI_042220 pqqD; (GenBank) PqqA binding protein K06138 pqqD; pyrroloquinoline quinone biosynthesis protein D D ROLI_007470 csaA; (GenBank) putative chaperone CsaA K06878 K06878; tRNA-binding protein D ROLI_041780 yjbI; (GenBank) Group 2 truncated hemoglobin YjbI K06886 glbN; hemoglobin D ROLI_021490 hypothetical protein K07001 K07001; NTE family protein D ROLI_008720 hypothetical protein K07025 K07025; putative hydrolase of the HAD superfamily D ROLI_037000 hypothetical protein K07025 K07025; putative hydrolase of the HAD superfamily D ROLI_021090 sufB; (GenBank) FeS cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB D ROLI_021050 sufD; (GenBank) FeS cluster assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD D ROLI_030060 hypothetical protein K07058 K07058; membrane protein D ROLI_040680 hypothetical protein K07058 K07058; membrane protein D ROLI_047690 hypothetical protein K07058 K07058; membrane protein D ROLI_043980 hypothetical protein K07113 fxsA; UPF0716 protein FxsA D ROLI_023960 sufE; (GenBank) Cysteine desulfuration protein SufE K02426 sufE; cysteine desulfuration protein SufE D ROLI_038880 hypothetical protein K07146 K07146; UPF0176 protein D ROLI_033740 slyX; (GenBank) Protein SlyX K03745 slyX; SlyX protein D ROLI_044660 hypothetical protein K05805 creA; CreA protein D ROLI_047600 hypothetical protein K05805 creA; CreA protein D ROLI_026450 hypothetical protein K08990 ycjF; putative membrane protein C 99997 Function unknown D ROLI_033060 hypothetical protein K06889 K06889; uncharacterized protein D ROLI_009270 ybhL; (GenBank) Inner membrane protein YbhL K06890 K06890; uncharacterized protein D ROLI_001600 hypothetical protein K06903 W; Bacteriophage baseplate protein W D ROLI_001530 hypothetical protein K06907 FI; Bacteriophage tail sheath protein D ROLI_026470 ycjX; (GenBank) putative protein YcjX K06918 K06918; uncharacterized protein D ROLI_012670 hypothetical protein K06923 K06923; uncharacterized protein D ROLI_009790 yccU; (GenBank) putative protein YccU K06929 K06929; uncharacterized protein D ROLI_020120 hypothetical protein K06938 K06938; uncharacterized protein D ROLI_025200 hypothetical protein K06938 K06938; uncharacterized protein D ROLI_026110 hypothetical protein K06953 K06953; uncharacterized protein D ROLI_004230 hypothetical protein K06954 K06954; uncharacterized protein D ROLI_016210 hypothetical protein K06971 K06971; uncharacterized protein D ROLI_009050 hypothetical protein K06978 K06978; uncharacterized protein D ROLI_018550 hypothetical protein K06987 K06987; uncharacterized protein D ROLI_039980 hypothetical protein K06995 K06995; uncharacterized protein D ROLI_018160 hypothetical protein K06996 K06996; uncharacterized protein D ROLI_047010 hypothetical protein K07005 K07005; uncharacterized protein D ROLI_007730 hypothetical protein K07006 K07006; uncharacterized protein D ROLI_021120 hypothetical protein K07018 K07018; uncharacterized protein D ROLI_006460 hypothetical protein K07032 K07032; uncharacterized protein D ROLI_008980 hypothetical protein K07080 K07080; uncharacterized protein D ROLI_014380 hypothetical protein K07080 K07080; uncharacterized protein D ROLI_015370 hypothetical protein K07080 K07080; uncharacterized protein D ROLI_027370 hypothetical protein K07080 K07080; uncharacterized protein D ROLI_041530 hypothetical protein K07080 K07080; uncharacterized protein D ROLI_039720 hypothetical protein K07086 K07086; uncharacterized protein D ROLI_030710 hypothetical protein K07089 K07089; uncharacterized protein D ROLI_006780 hypothetical protein K07090 K07090; uncharacterized protein D ROLI_007910 hypothetical protein K07090 K07090; uncharacterized protein D ROLI_016500 hypothetical protein K07090 K07090; uncharacterized protein D ROLI_027990 hypothetical protein K07090 K07090; uncharacterized protein D ROLI_035290 hypothetical protein K07090 K07090; uncharacterized protein D ROLI_017620 hypothetical protein K07093 K07093; uncharacterized protein D ROLI_041440 hypothetical protein K07112 K07112; uncharacterized protein D ROLI_010870 hypothetical protein K07126 K07126; uncharacterized protein D ROLI_033880 hypothetical protein K07140 K07140; MOSC domain-containing protein D ROLI_037370 hypothetical protein K07157 K07157; uncharacterized protein D ROLI_018300 hypothetical protein K07161 K07161; uncharacterized protein D ROLI_005850 Putative membrane protein insertion efficiency factor K08998 K08998; uncharacterized protein D ROLI_018640 hypothetical protein K09005 K09005; uncharacterized protein D ROLI_008760 yqeY; (GenBank) putative protein YqeY K09117 K09117; uncharacterized protein D ROLI_007180 hypothetical protein K09160 K09160; uncharacterized protein D ROLI_034830 hypothetical protein K09386 K09386; uncharacterized protein D ROLI_004240 hypothetical protein K09701 K09701; uncharacterized protein D ROLI_039820 hypothetical protein K09768 K09768; uncharacterized protein D ROLI_044220 yciI; (GenBank) Protein YciI K09780 K09780; uncharacterized protein D ROLI_024170 hypothetical protein K09781 K09781; uncharacterized protein D ROLI_037360 hypothetical protein K09791 K09791; uncharacterized protein D ROLI_034600 hypothetical protein K09794 K09794; uncharacterized protein D ROLI_048280 hypothetical protein K09803 K09803; uncharacterized protein D ROLI_015120 26 kDa periplasmic immunogenic protein K09807 K09807; uncharacterized protein D ROLI_002300 hypothetical protein K09822 K09822; uncharacterized protein D ROLI_043000 yaaA; (GenBank) Peroxide stress resistance protein YaaA K09861 K09861; uncharacterized protein D ROLI_030450 yacG; (GenBank) DNA gyrase inhibitor YacG K09862 K09862; uncharacterized protein D ROLI_001880 hypothetical protein K09919 K09919; uncharacterized protein D ROLI_026370 hypothetical protein K09921 K09921; uncharacterized protein D ROLI_038540 hypothetical protein K09927 K09927; uncharacterized protein D ROLI_004750 hypothetical protein K09928 K09928; uncharacterized protein D ROLI_006370 hypothetical protein K09930 K09930; uncharacterized protein D ROLI_000450 hypothetical protein K09931 K09931; uncharacterized protein D ROLI_008340 hypothetical protein K09937 K09937; uncharacterized protein D ROLI_020170 hypothetical protein K09947 K09947; uncharacterized protein D ROLI_003070 hypothetical protein K09948 K09948; uncharacterized protein D ROLI_015050 hypothetical protein K09950 K09950; uncharacterized protein D ROLI_015060 hypothetical protein K09950 K09950; uncharacterized protein D ROLI_013560 hypothetical protein K09957 K09957; uncharacterized protein D ROLI_005760 hypothetical protein K09958 K09958; uncharacterized protein D ROLI_031860 hypothetical protein K09966 K09966; uncharacterized protein D ROLI_006660 hypothetical protein K09967 K09967; uncharacterized protein D ROLI_034450 hypothetical protein K09981 K09981; uncharacterized protein D ROLI_023750 hypothetical protein K09985 K09985; uncharacterized protein D ROLI_042940 hypothetical protein K09986 K09986; uncharacterized protein D ROLI_003320 hypothetical protein K09987 K09987; uncharacterized protein D ROLI_022360 hypothetical protein K09989 K09989; uncharacterized protein D ROLI_013480 hypothetical protein K09992 K09992; uncharacterized protein D ROLI_020160 hypothetical protein K07338 K07338; uncharacterized protein D ROLI_043490 hypothetical protein K07742 ylxR; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 27, 2025