+D GENES KO
#
KEGG Orthology (KO) - Mediterraneibacter gnavus
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:rgn00010]
D RGna_05755 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D RGna_11075 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RGna_09900 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D RGna_13130 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D RGna_10505 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D RGna_17300 fructose-bisphosphatase class III K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D RGna_08710 fba; fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RGna_04720 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D RGna_04730 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RGna_04725 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D RGna_04695 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D RGna_17335 cofactor-independent phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D RGna_14445 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RGna_04230 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RGna_01615 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RGna_06015 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D RGna_06145 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D RGna_03720 hypothetical protein K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D RGna_09990 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D RGna_08150 bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D RGna_15205 aldo/keto reductase K00002 AKR1A1; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D RGna_12425 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RGna_09185 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RGna_12115 galactose-1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D RGna_10570 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RGna_08985 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D RGna_14475 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D RGna_04790 glycoside hydrolase family 1 protein K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D RGna_07790 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D RGna_08395 beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D RGna_04445 PTS glucose transporter subunit IIA K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
C 00020 Citrate cycle (TCA cycle) [PATH:rgn00020]
D RGna_01435 2-isopropylmalate synthase K05942 E2.3.3.3; citrate (Re)-synthase [EC:2.3.3.3]
D RGna_11015 citrate/2-methylcitrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D RGna_01445 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D RGna_11360 FAD-binding protein K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D RGna_11355 succinate dehydrogenase K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D RGna_11405 hypothetical protein K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D RGna_11590 fumarate hydratase K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D RGna_11595 Fe-S-containing hydro-lyase K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D RGna_08985 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D RGna_06145 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
C 00030 Pentose phosphate pathway [PATH:rgn00030]
D RGna_11075 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RGna_06265 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D RGna_11470 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D RGna_13265 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RGna_13270 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RGna_10470 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RGna_10475 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RGna_10480 fsa; fructose-6-phosphate aldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D RGna_08780 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D RGna_07670 deoC; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D RGna_12265 rbsK; ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D RGna_06885 ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D RGna_10815 ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D RGna_10865 LacI family DNA-binding transcriptional regulator K00852 rbsK; ribokinase [EC:2.7.1.15]
D RGna_07695 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D RGna_10570 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RGna_02090 phosphoribosylpyrophosphate synthetase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D RGna_08915 phosphoribosylpyrophosphate synthetase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D RGna_15170 2-dehydro-3-deoxyphosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D RGna_12700 sugar kinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D RGna_15175 sugar kinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D RGna_08710 fba; fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RGna_17300 fructose-bisphosphatase class III K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D RGna_09900 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D RGna_13130 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D RGna_10505 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C 00040 Pentose and glucuronate interconversions [PATH:rgn00040]
D RGna_14935 5-dehydro-4-deoxy-D-glucuronate isomerase K01815 kduI; 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [EC:5.3.1.17]
D RGna_15160 glucuronate isomerase K01812 uxaC; glucuronate isomerase [EC:5.3.1.12]
D RGna_00690 glucuronate isomerase K01812 uxaC; glucuronate isomerase [EC:5.3.1.12]
D RGna_00680 tagaturonate reductase K00041 uxaB; tagaturonate reductase [EC:1.1.1.58]
D RGna_00685 altronate dehydratase K01685 uxaA; altronate hydrolase [EC:4.2.1.7]
D RGna_15150 uxuA; mannonate dehydratase K01686 uxuA; mannonate dehydratase [EC:4.2.1.8]
D RGna_04555 mannonate dehydratase K01686 uxuA; mannonate dehydratase [EC:4.2.1.8]
D RGna_15155 mannitol dehydrogenase family protein K00040 uxuB; fructuronate reductase [EC:1.1.1.57]
D RGna_15205 aldo/keto reductase K00002 AKR1A1; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D RGna_04580 3-dehydro-L-gulonate 2-dehydrogenase K08092 dlgD; 3-dehydro-L-gulonate 2-dehydrogenase [EC:1.1.1.130]
D RGna_15135 carbohydrate kinase K00880 lyxK; L-xylulokinase [EC:2.7.1.53]
D RGna_07615 L-ribulose-5-phosphate 3-epimerase K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22]
D RGna_07605 L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D RGna_06265 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D RGna_11470 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D RGna_14525 xylB; xylulokinase K00854 xylB; xylulokinase [EC:2.7.1.17]
D RGna_15190 xylB; xylulokinase K00854 xylB; xylulokinase [EC:2.7.1.17]
D RGna_06910 carbohydrate kinase K00854 xylB; xylulokinase [EC:2.7.1.17]
D RGna_14975 rhaB; rhamnulokinase K00848 rhaB; rhamnulokinase [EC:2.7.1.5]
D RGna_15270 rhamnulokinase K00848 rhaB; rhamnulokinase [EC:2.7.1.5]
D RGna_15050 theronine dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D RGna_15195 galactitol-1-phosphate 5-dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D RGna_15275 L-fucose isomerase K01818 fucI; L-fucose/D-arabinose isomerase [EC:5.3.1.25 5.3.1.3]
D RGna_15035 class II aldolase/adducin family protein K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
C 00051 Fructose and mannose metabolism [PATH:rgn00051]
D RGna_13695 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D RGna_15275 L-fucose isomerase K01818 fucI; L-fucose/D-arabinose isomerase [EC:5.3.1.25 5.3.1.3]
D RGna_15035 class II aldolase/adducin family protein K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
D RGna_14980 L-rhamnose isomerase K01813 rhaA; L-rhamnose isomerase [EC:5.3.1.14]
D RGna_14975 rhaB; rhamnulokinase K00848 rhaB; rhamnulokinase [EC:2.7.1.5]
D RGna_15270 rhamnulokinase K00848 rhaB; rhamnulokinase [EC:2.7.1.5]
D RGna_09900 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D RGna_13130 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D RGna_10505 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D RGna_17300 fructose-bisphosphatase class III K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D RGna_04940 pfkB; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D RGna_15050 theronine dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D RGna_15195 galactitol-1-phosphate 5-dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D RGna_08710 fba; fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RGna_04720 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D RGna_08780 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
C 00052 Galactose metabolism [PATH:rgn00052]
D RGna_12115 galactose-1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D RGna_00845 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D RGna_00840 galT; UDP-glucose--hexose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D RGna_04480 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RGna_10570 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RGna_05755 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D RGna_12080 glycoside hydrolase family 2 K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D RGna_14820 glycoside hydrolase family 2 K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D RGna_02770 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D RGna_07950 hypothetical protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D RGna_08645 beta-galactosidase small subunit K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D RGna_11790 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D RGna_14530 beta-galactosidase K12308 bgaB; beta-galactosidase [EC:3.2.1.23]
D RGna_08010 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D RGna_17195 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D RGna_17200 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D RGna_15200 pfkB; 1-phosphofructokinase K00917 lacC; tagatose 6-phosphate kinase [EC:2.7.1.144]
D RGna_09900 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D RGna_13130 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D RGna_10505 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D RGna_15180 kbaY; ketose-bisphosphate aldolase K08302 gatY-kbaY; tagatose 1,6-diphosphate aldolase GatY/KbaY [EC:4.1.2.40]
D RGna_14535 sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D RGna_16140 glycosyl hydrolase family 32 K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D RGna_06765 glycoside hydrolase family 32 protein K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D RGna_14990 DUF4968 domain-containing protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D RGna_15010 DUF4968 domain-containing protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D RGna_14770 PTS sugar transporter subunit IIA K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-]
D RGna_14780 PTS system mannose/fructose/N-acetylgalactosamine-transporter subunit IIB K02745 agaV; N-acetylgalactosamine PTS system EIIB component [EC:2.7.1.-]
D RGna_14785 PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC K02746 agaW; N-acetylgalactosamine PTS system EIIC component
D RGna_14790 PTS N-acetylgalactosamine transporter subunit IID K02747 agaE; N-acetylgalactosamine PTS system EIID component
C 00053 Ascorbate and aldarate metabolism [PATH:rgn00053]
D RGna_15205 aldo/keto reductase K00002 AKR1A1; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D RGna_07635 PTS sugar transporter subunit IIA K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D RGna_07625 PTS lactose transporter subunit IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D RGna_07630 PTS ascorbate transporter subunit IIC K03475 ulaA; ascorbate PTS system EIIC component
D RGna_07640 L-ascorbate 6-phosphate lactonase K03476 ulaG; L-ascorbate 6-phosphate lactonase [EC:3.1.1.-]
D RGna_07615 L-ribulose-5-phosphate 3-epimerase K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22]
D RGna_07605 L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D RGna_04580 3-dehydro-L-gulonate 2-dehydrogenase K08092 dlgD; 3-dehydro-L-gulonate 2-dehydrogenase [EC:1.1.1.130]
D RGna_15135 carbohydrate kinase K00880 lyxK; L-xylulokinase [EC:2.7.1.53]
D RGna_12425 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RGna_09185 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00500 Starch and sucrose metabolism [PATH:rgn00500]
D RGna_14540 PTS sugar transporter subunit IIA K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D RGna_14535 sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D RGna_16140 glycosyl hydrolase family 32 K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D RGna_06765 glycoside hydrolase family 32 protein K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D RGna_14990 DUF4968 domain-containing protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D RGna_15010 DUF4968 domain-containing protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D RGna_12095 beta-glucosidase-related glycosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RGna_14545 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RGna_17030 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RGna_17045 glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RGna_06115 hypothetical protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RGna_09840 cellulase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D RGna_09845 hypothetical protein K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D RGna_14475 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D RGna_04790 glycoside hydrolase family 1 protein K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D RGna_07790 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D RGna_08395 beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D RGna_12120 glgD; glucose-1-phosphate adenylyltransferase subunit GlgD K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D RGna_12125 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D RGna_08890 glgD; glucose-1-phosphate adenylyltransferase subunit GlgD K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D RGna_08895 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D RGna_04090 glycogen synthase GlgA K00703 glgA; starch synthase [EC:2.4.1.21]
D RGna_12065 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D RGna_08520 glycogen/starch/alpha-glucan family phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D RGna_11290 glycogen/starch/alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D RGna_08530 pulA; type I pullulanase K01200 pulA; pullulanase [EC:3.2.1.41]
D RGna_13090 maltodextrin glucosidase K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135]
D RGna_06080 alpha-glycosidase K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135]
D RGna_08510 glycoside hydrolase family 13 protein K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135]
D RGna_08515 malQ; 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D RGna_04880 glycogen debranching protein K01214 ISA; isoamylase [EC:3.2.1.68]
D RGna_10570 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RGna_05755 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D RGna_11075 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RGna_13695 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:rgn00520]
D RGna_10640 PTS glucose transporter subunit IIBC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D RGna_16840 nagA; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D RGna_06890 glucosamine-6-phosphate isomerase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D RGna_10655 nagB; glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D RGna_13695 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D RGna_17655 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D RGna_08770 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D RGna_04835 UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D RGna_12815 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D RGna_08740 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D RGna_08350 putative N-acetylmannosamine-6-phosphate 2-epimerase K01788 nanE; N-acylglucosamine-6-phosphate 2-epimerase [EC:5.1.3.9]
D RGna_11985 neuB; N-acetylneuraminate synthase K01654 neuB; N-acetylneuraminate synthase [EC:2.5.1.56]
D RGna_08345 N-acetylneuraminate lyase K01639 E4.1.3.3; N-acetylneuraminate lyase [EC:4.1.3.3]
D RGna_11990 acylneuraminate cytidylyltransferase family protein K00983 neuA; N-acylneuraminate cytidylyltransferase [EC:2.7.7.43]
D RGna_12000 KR domain-containing protein K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-]
D RGna_04445 PTS glucose transporter subunit IIA K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
D RGna_05755 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D RGna_10570 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RGna_00845 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D RGna_00840 galT; UDP-glucose--hexose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D RGna_04480 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RGna_08010 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D RGna_11075 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RGna_00050 bifunctional fucokinase/L-fucose-1-P-guanylyltransferase K25314 FKGP; fucokinase / fucose-1-phosphate guanylyltransferase [EC:2.7.1.52 2.7.7.30]
D RGna_12120 glgD; glucose-1-phosphate adenylyltransferase subunit GlgD K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D RGna_12125 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D RGna_08890 glgD; glucose-1-phosphate adenylyltransferase subunit GlgD K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D RGna_08895 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:rgn00620]
D RGna_06145 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D RGna_15515 pflB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D RGna_08150 bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D RGna_15205 aldo/keto reductase K00002 AKR1A1; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D RGna_02005 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D RGna_02000 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D RGna_15075 phosphate propanoyltransferase K15024 K15024; putative phosphotransacetylase [EC:2.3.1.8]
D RGna_01615 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RGna_08590 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D RGna_08580 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D RGna_12575 hypothetical protein K01512 acyP; acylphosphatase [EC:3.6.1.7]
D RGna_12425 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RGna_09185 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RGna_03720 hypothetical protein K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D RGna_09990 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D RGna_16045 lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D RGna_05895 MBL fold metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D RGna_00880 NADP-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D RGna_03810 oxaloacetate decarboxylase subunit alpha K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D RGna_03815 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D RGna_11590 fumarate hydratase K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D RGna_11595 Fe-S-containing hydro-lyase K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D RGna_08985 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D RGna_06015 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D RGna_03835 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:rgn00630]
D RGna_11015 citrate/2-methylcitrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D RGna_02830 HAD family hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D RGna_04685 phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D RGna_05025 HAD family hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D RGna_10825 haloacid dehalogenase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D RGna_11725 HAD family hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D RGna_14740 type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RGna_08705 glutamine synthetase type III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RGna_00980 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RGna_03240 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D RGna_03420 lactaldehyde reductase K00048 fucO; lactaldehyde reductase [EC:1.1.1.77]
D RGna_15170 2-dehydro-3-deoxyphosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
C 00640 Propanoate metabolism [PATH:rgn00640]
D RGna_02005 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D RGna_02000 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D RGna_15075 phosphate propanoyltransferase K15024 K15024; putative phosphotransacetylase [EC:2.3.1.8]
D RGna_15515 pflB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D RGna_08590 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D RGna_08580 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D RGna_11015 citrate/2-methylcitrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D RGna_03720 hypothetical protein K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D RGna_09990 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D RGna_03025 methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3]
D RGna_04815 methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3]
D RGna_03100 aldo/keto reductase K18471 ydjG; methylglyoxal reductase [EC:1.1.1.-]
D RGna_12925 glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]
D RGna_05475 gldA; glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]
D RGna_03420 lactaldehyde reductase K00048 fucO; lactaldehyde reductase [EC:1.1.1.77]
D RGna_06695 pduC; propanediol dehydratase large subunit PduC K01699 pduC; propanediol dehydratase large subunit [EC:4.2.1.28]
D RGna_06690 propanediol dehydratase medium subunit PduD K13919 pduD; propanediol dehydratase medium subunit [EC:4.2.1.28]
D RGna_06685 dehydratase K13920 pduE; propanediol dehydratase small subunit [EC:4.2.1.28]
D RGna_15045 aldehyde dehydrogenase EutE K13922 pduP; propionaldehyde dehydrogenase [EC:1.2.1.87]
C 00650 Butanoate metabolism [PATH:rgn00650]
D RGna_08150 bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D RGna_03815 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D RGna_03820 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D RGna_03825 DUF3887 domain-containing protein K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta
D RGna_11360 FAD-binding protein K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D RGna_11355 succinate dehydrogenase K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D RGna_11405 hypothetical protein K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D RGna_15515 pflB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D RGna_06145 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D RGna_15335 NAD(P)-dependent alcohol dehydrogenase K23259 adh; isopropanol dehydrogenase (NADP+) [EC:1.1.1.80]
D RGna_01420 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RGna_05835 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RGna_04460 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D RGna_05830 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:rgn00660]
D RGna_01420 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RGna_05835 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RGna_04460 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D RGna_05830 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D RGna_05705 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D RGna_05700 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D RGna_01410 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:rgn00562]
D RGna_09680 phospholipase K01114 plc; phospholipase C [EC:3.1.4.3]
D RGna_06750 gfo/Idh/MocA family oxidoreductase K22230 iolU; scyllo-inositol 2-dehydrogenase (NADP+) [EC:1.1.1.-]
D RGna_04720 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:rgn00190]
D RGna_10615 NAD(P)H-dependent oxidoreductase subunit E K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D RGna_08750 NAD(P)H-dependent oxidoreductase subunit E K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D RGna_10610 4Fe-4S dicluster domain-containing protein K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D RGna_10605 ferredoxin K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D RGna_11360 FAD-binding protein K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D RGna_11355 succinate dehydrogenase K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D RGna_11405 hypothetical protein K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D RGna_12195 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D RGna_12205 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D RGna_12200 atpG; ATP synthase F1 subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D RGna_12190 atpH; F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D RGna_12210 atpC; ATP synthase F1 subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D RGna_12175 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D RGna_12185 atpF; ATP synthase F0 subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D RGna_12180 atpE; ATP synthase F0 subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D RGna_12735 V-type ATP synthase subunit A K02117 ATPVA; V/A-type H+/Na+-transporting ATPase subunit A [EC:7.1.2.2 7.2.2.1]
D RGna_13185 V-type ATP synthase subunit A K02117 ATPVA; V/A-type H+/Na+-transporting ATPase subunit A [EC:7.1.2.2 7.2.2.1]
D RGna_12740 V-type ATP synthase subunit B K02118 ATPVB; V/A-type H+/Na+-transporting ATPase subunit B
D RGna_13180 V-type ATP synthase subunit B K02118 ATPVB; V/A-type H+/Na+-transporting ATPase subunit B
D RGna_12725 V-type ATP synthase subunit C K02119 ATPVC; V/A-type H+/Na+-transporting ATPase subunit C
D RGna_13210 V-type ATP synthase subunit C K02119 ATPVC; V/A-type H+/Na+-transporting ATPase subunit C
D RGna_12745 V-type ATP synthase subunit D K02120 ATPVD; V/A-type H+/Na+-transporting ATPase subunit D
D RGna_13175 V-type ATP synthase subunit D K02120 ATPVD; V/A-type H+/Na+-transporting ATPase subunit D
D RGna_12720 hypothetical protein K02121 ATPVE; V/A-type H+/Na+-transporting ATPase subunit E
D RGna_12730 V-type ATP synthase subunit F K02122 ATPVF; V/A-type H+/Na+-transporting ATPase subunit F
D RGna_13195 V-type ATP synthase subunit F K02122 ATPVF; V/A-type H+/Na+-transporting ATPase subunit F
D RGna_12705 hypothetical protein K02107 ATPVG; V/A-type H+/Na+-transporting ATPase subunit G/H
D RGna_12710 V-type ATP synthase subunit I K02123 ATPVI; V/A-type H+/Na+-transporting ATPase subunit I
D RGna_13205 ATPase K02123 ATPVI; V/A-type H+/Na+-transporting ATPase subunit I
D RGna_12715 permease K02124 ATPVK; V/A-type H+/Na+-transporting ATPase subunit K
D RGna_13200 ATPase K02124 ATPVK; V/A-type H+/Na+-transporting ATPase subunit K
D RGna_00830 putative manganese-dependent inorganic diphosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1]
D RGna_16100 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D RGna_04845 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:rgn00710]
D RGna_04725 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D RGna_04730 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RGna_08710 fba; fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RGna_17300 fructose-bisphosphatase class III K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D RGna_13265 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RGna_13270 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RGna_10470 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RGna_10475 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RGna_08780 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D RGna_04720 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D RGna_06265 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D RGna_11470 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D RGna_10480 fsa; fructose-6-phosphate aldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D RGna_08985 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D RGna_06015 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
C 00720 Other carbon fixation pathways [PATH:rgn00720]
D RGna_06145 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D RGna_06015 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D RGna_11590 fumarate hydratase K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D RGna_11595 Fe-S-containing hydro-lyase K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D RGna_11360 FAD-binding protein K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D RGna_11355 succinate dehydrogenase K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D RGna_11405 hypothetical protein K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D RGna_01445 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D RGna_08590 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D RGna_08580 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D RGna_01510 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D RGna_01515 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D RGna_02675 bifunctional 5,10-methylenetetrahydrofolate dehydrogenase/5,10-methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D RGna_04085 metF; methylenetetrahydrofolate reductase [NAD(P)H] K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D RGna_12250 cooS; carbon-monoxide dehydrogenase catalytic subunit K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4]
D RGna_12245 nitrate reductase K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit
D RGna_02000 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D RGna_15075 phosphate propanoyltransferase K15024 K15024; putative phosphotransacetylase [EC:2.3.1.8]
D RGna_02005 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00680 Methane metabolism [PATH:rgn00680]
D RGna_12250 cooS; carbon-monoxide dehydrogenase catalytic subunit K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4]
D RGna_12245 nitrate reductase K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit
D RGna_00980 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RGna_14445 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RGna_04230 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RGna_08710 fba; fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RGna_17300 fructose-bisphosphatase class III K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D RGna_09900 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D RGna_13130 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D RGna_10505 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D RGna_02005 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D RGna_02000 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D RGna_04695 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D RGna_17335 cofactor-independent phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D RGna_01430 3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D RGna_01425 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00910 Nitrogen metabolism [PATH:rgn00910]
D RGna_17475 hydroxylamine reductase K05601 hcp; hydroxylamine reductase [EC:1.7.99.1]
D RGna_09195 hydroxylamine reductase K05601 hcp; hydroxylamine reductase [EC:1.7.99.1]
D RGna_08570 nitronate monooxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D RGna_04055 NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D RGna_14740 type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RGna_08705 glutamine synthetase type III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RGna_14730 glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D RGna_12415 pyridine nucleotide-disulfide oxidoreductase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D RGna_14735 glutamate synthase subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D RGna_01535 gltA; glutamate synthase (NADPH), homotetrameric K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D RGna_13630 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D RGna_16150 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00920 Sulfur metabolism [PATH:rgn00920]
D RGna_04375 bifunctional oligoribonuclease/PAP phosphatase NrnA K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D RGna_17395 nitrite/sulfite reductase K00392 sir; sulfite reductase (ferredoxin) [EC:1.8.7.1]
D RGna_01105 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D RGna_01000 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D RGna_01245 homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:rgn00061]
D RGna_08590 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D RGna_08580 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D RGna_02025 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D RGna_08615 acyl carrier protein K02078 acpP; acyl carrier protein
D RGna_08605 fabD; [acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D RGna_08620 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D RGna_08595 fabF; beta-ketoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D RGna_14895 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RGna_08600 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RGna_08585 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D RGna_08610 fabK; enoyl-[acyl-carrier-protein] reductase FabK K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:rgn00071]
D RGna_08150 bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D RGna_12425 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RGna_09185 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00074 Mycolic acid biosynthesis
D RGna_02025 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D RGna_08615 acyl carrier protein K02078 acpP; acyl carrier protein
D RGna_08605 fabD; [acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis [PATH:rgn00121]
D RGna_16070 3-oxoacyl-ACP reductase FabG K22605 baiA; 3alpha-hydroxycholanate dehydrogenase (NADP+) [EC:1.1.1.392]
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:rgn00561]
D RGna_03240 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D RGna_12425 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RGna_09185 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RGna_15205 aldo/keto reductase K00002 AKR1A1; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D RGna_12925 glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]
D RGna_05475 gldA; glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]
D RGna_13275 glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30]
D RGna_06105 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D RGna_02020 phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D RGna_02105 plsY; acyl-phosphate glycerol 3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D RGna_05955 glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D RGna_09955 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D RGna_11600 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D RGna_08720 diacylglycerol kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D RGna_12500 glycosyltransferase family 4 protein K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D RGna_05950 glycosyl transferase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
D RGna_17195 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D RGna_17200 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
C 00564 Glycerophospholipid metabolism [PATH:rgn00564]
D RGna_02110 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D RGna_06075 FAD/NAD(P)-binding oxidoreductase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D RGna_02105 plsY; acyl-phosphate glycerol 3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D RGna_05955 glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D RGna_09955 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D RGna_11600 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D RGna_11965 tagD; glycerol-3-phosphate cytidylyltransferase K00980 tagD; glycerol-3-phosphate cytidylyltransferase [EC:2.7.7.39]
D RGna_08720 diacylglycerol kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D RGna_09680 phospholipase K01114 plc; phospholipase C [EC:3.1.4.3]
D RGna_17120 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D RGna_04285 CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D RGna_04280 phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D RGna_02215 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D RGna_01200 cls; cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D RGna_09880 cls; cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D RGna_03675 phospholipase D family protein K06132 clsC; cardiolipin synthase C [EC:2.7.8.-]
D RGna_03070 CDP-alcohol phosphatidyltransferase family protein K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41]
C 00565 Ether lipid metabolism
D RGna_09680 phospholipase K01114 plc; phospholipase C [EC:3.1.4.3]
C 00600 Sphingolipid metabolism [PATH:rgn00600]
D RGna_12080 glycoside hydrolase family 2 K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D RGna_14820 glycoside hydrolase family 2 K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D RGna_02770 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D RGna_07950 hypothetical protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D RGna_08645 beta-galactosidase small subunit K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D RGna_11790 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D RGna_08355 sialidase K01186 NEU1; sialidase-1 [EC:3.2.1.18]
D RGna_17195 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D RGna_17200 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:rgn00230]
D RGna_04770 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D RGna_07695 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D RGna_10570 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RGna_02090 phosphoribosylpyrophosphate synthetase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D RGna_08915 phosphoribosylpyrophosphate synthetase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D RGna_04925 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D RGna_07700 phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D RGna_07705 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D RGna_01050 phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D RGna_07710 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D RGna_07715 purE; 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D RGna_04930 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D RGna_04920 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D RGna_14240 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D RGna_14235 inosine monophosphate cyclohydrolase K11176 purO; IMP cyclohydrolase [EC:3.5.4.10]
D RGna_07655 purine-nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D RGna_06330 pgeF; peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D RGna_10530 hpt; hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D RGna_15945 IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D RGna_07980 XTP/dITP diphosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D RGna_12485 xanthine phosphoribosyltransferase K03816 xpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D RGna_16880 xanthine dehydrogenase molybdenum-binding subunit XdhA K00087 ygeS; xanthine dehydrogenase molybdenum-binding subunit [EC:1.17.1.4]
D RGna_16885 xanthine dehydrogenase FAD-binding subunit XdhB K13479 ygeT; xanthine dehydrogenase FAD-binding subunit [EC:1.17.1.4]
D RGna_16890 (2Fe-2S)-binding protein K13480 ygeU; xanthine dehydrogenase iron-sulfur-binding subunit
D RGna_09805 glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D RGna_16875 guanine deaminase K01487 guaD; guanine deaminase [EC:3.5.4.3]
D RGna_02200 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D RGna_02705 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D RGna_11695 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D RGna_08020 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D RGna_08025 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D RGna_12620 ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D RGna_01265 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D RGna_02720 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D RGna_12650 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D RGna_05900 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D RGna_14755 GTP pyrophosphokinase family protein K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5]
D RGna_07430 GTP pyrophosphokinase family protein K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5]
D RGna_17350 adenylate cyclase K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D RGna_01205 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D RGna_07645 add; adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4]
D RGna_06030 ade; adenine deaminase K01486 ade; adenine deaminase [EC:3.5.4.2]
D RGna_06035 adenine deaminase K01486 ade; adenine deaminase [EC:3.5.4.2]
D RGna_08200 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D RGna_13630 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D RGna_16150 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00240 Pyrimidine metabolism [PATH:rgn00240]
D RGna_17165 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D RGna_17160 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D RGna_02150 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D RGna_02145 aspartate carbamoyltransferase regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D RGna_07775 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D RGna_07760 dihydroorotate dehydrogenase K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14]
D RGna_07765 dihydroorotate dehydrogenase electron transfer subunit K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit
D RGna_07735 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D RGna_07770 pyrF; orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D RGna_17105 pyrH; UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D RGna_12150 septum formation inhibitor Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D RGna_05780 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D RGna_03790 (d)CMP kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D RGna_16110 uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D RGna_01365 nucleoside kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D RGna_11195 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D RGna_07675 pyrimidine-nucleoside phosphorylase K00756 pdp; pyrimidine-nucleoside phosphorylase [EC:2.4.2.2]
D RGna_07650 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D RGna_12620 ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D RGna_01265 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D RGna_02720 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D RGna_08020 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D RGna_08025 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D RGna_11190 cytidine deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D RGna_01275 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D RGna_02740 hypothetical protein K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D RGna_02765 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D RGna_05860 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D RGna_11000 hydA; dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:rgn00250]
D RGna_00945 pyridoxal phosphate-dependent aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D RGna_11860 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D RGna_14210 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D RGna_06700 aspartate--ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D RGna_14725 asparagine synthase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D RGna_05115 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D RGna_06735 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D RGna_09110 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D RGna_00160 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D RGna_05715 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D RGna_01205 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D RGna_04920 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D RGna_02150 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D RGna_02145 aspartate carbamoyltransferase regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D RGna_14730 glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D RGna_12415 pyridine nucleotide-disulfide oxidoreductase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D RGna_14735 glutamate synthase subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D RGna_01535 gltA; glutamate synthase (NADPH), homotetrameric K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D RGna_04055 NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D RGna_14740 type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RGna_08705 glutamine synthetase type III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RGna_17165 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D RGna_17160 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D RGna_17655 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D RGna_04925 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:rgn00260]
D RGna_17340 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RGna_03180 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RGna_05710 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D RGna_17330 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D RGna_05865 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D RGna_05690 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D RGna_00980 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RGna_03240 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D RGna_04695 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D RGna_17335 cofactor-independent phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D RGna_01430 3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D RGna_01425 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D RGna_04285 CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D RGna_03215 class I SAM-dependent methyltransferase K18896 gsmt; glycine/sarcosine N-methyltransferase [EC:2.1.1.156]
D RGna_04035 sdaAA; L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D RGna_04040 sdaAB; L-serine ammonia-lyase, iron-sulfur-dependent, subunit beta K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D RGna_02045 threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D RGna_10060 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D RGna_10065 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:rgn00270]
D RGna_01105 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D RGna_01000 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D RGna_03875 aspartate aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D RGna_04075 homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D RGna_12825 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D RGna_01845 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D RGna_09625 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D RGna_12395 polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
D RGna_02800 5'-methylthioadenosine/adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D RGna_05305 5'-methylthioadenosine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D RGna_06330 pgeF; peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D RGna_00255 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RGna_00380 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RGna_01805 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RGna_04865 S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D RGna_17340 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RGna_03180 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RGna_05710 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D RGna_17330 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D RGna_05865 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D RGna_01245 homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D RGna_12230 O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D RGna_01495 O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D RGna_05825 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RGna_00945 pyridoxal phosphate-dependent aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D RGna_03720 hypothetical protein K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D RGna_09990 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D RGna_04035 sdaAA; L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D RGna_04040 sdaAB; L-serine ammonia-lyase, iron-sulfur-dependent, subunit beta K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D RGna_01430 3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D RGna_01425 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:rgn00280]
D RGna_05825 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RGna_04830 NAD(P)-dependent oxidoreductase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D RGna_12425 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RGna_09185 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:rgn00290]
D RGna_02045 threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D RGna_05705 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D RGna_05700 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D RGna_01410 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D RGna_01420 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RGna_05835 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RGna_04460 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D RGna_05830 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D RGna_04455 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D RGna_01415 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D RGna_04650 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D RGna_05825 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RGna_03835 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:rgn00300]
D RGna_17330 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D RGna_05865 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D RGna_17340 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RGna_03180 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RGna_05710 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D RGna_17290 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D RGna_06865 dihydrodipicolinate synthase family protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D RGna_17295 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D RGna_00200 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D RGna_13705 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D RGna_15405 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D RGna_14750 LL-diaminopimelate aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D RGna_01255 LL-diaminopimelate aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D RGna_01625 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D RGna_07830 diaminopimelate dehydrogenase K03340 dapdh; diaminopimelate dehydrogenase [EC:1.4.1.16]
D RGna_06315 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D RGna_09970 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation
D RGna_12425 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RGna_09185 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00220 Arginine biosynthesis [PATH:rgn00220]
D RGna_12855 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D RGna_00160 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D RGna_05715 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D RGna_14740 type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RGna_08705 glutamine synthetase type III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RGna_17165 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D RGna_17160 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D RGna_13630 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D RGna_16150 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D RGna_04055 NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D RGna_00945 pyridoxal phosphate-dependent aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D RGna_00190 bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D RGna_00185 N-acetyltransferase K22477 argO; N-acetylglutamate synthase [EC:2.3.1.1]
D RGna_00195 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D RGna_00180 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D RGna_00200 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:rgn00330]
D RGna_11055 creatinine amidohydrolase K01470 E3.5.2.10; creatinine amidohydrolase [EC:3.5.2.10]
D RGna_04570 hydantoinase K01473 hyuA; N-methylhydantoinase A [EC:3.5.2.14]
D RGna_12390 aminotransferase class V-fold PLP-dependent enzyme K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D RGna_11690 aminotransferase class V-fold PLP-dependent enzyme K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D RGna_12400 speB; agmatinase K01480 speB; agmatinase [EC:3.5.3.11]
D RGna_12405 saccharopine dehydrogenase K27502 capadh; carboxyaminopropylagmatine dehydrogenase [EC:1.5.1.55]
D RGna_12410 nspC; carboxynorspermidine decarboxylase K27684 capadc; carboxyaminopropylagmatine decarboxylase [EC:4.1.1.127]
D RGna_12395 polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
D RGna_12425 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RGna_09185 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RGna_12580 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D RGna_00170 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D RGna_00175 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D RGna_00945 pyridoxal phosphate-dependent aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:rgn00340]
D RGna_03515 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D RGna_03520 hisZ; ATP phosphoribosyltransferase regulatory subunit K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit
D RGna_03500 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]
D RGna_17315 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D RGna_14660 hisH; imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D RGna_14665 imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D RGna_03505 imidazoleglycerol-phosphate dehydratase HisB K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D RGna_00950 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RGna_04735 PHP domain-containing protein K04486 E3.1.3.15B; histidinol-phosphatase (PHP family) [EC:3.1.3.15]
D RGna_03510 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D RGna_12425 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RGna_09185 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00350 Tyrosine metabolism [PATH:rgn00350]
D RGna_00945 pyridoxal phosphate-dependent aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D RGna_00950 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RGna_09105 aminotransferase class V-fold PLP-dependent enzyme K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105]
D RGna_08150 bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00360 Phenylalanine metabolism [PATH:rgn00360]
D RGna_09105 aminotransferase class V-fold PLP-dependent enzyme K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105]
D RGna_00945 pyridoxal phosphate-dependent aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D RGna_00950 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RGna_10990 FAD-dependent oxidoreductase K10797 enr; 2-enoate reductase [EC:1.3.1.31]
C 00380 Tryptophan metabolism [PATH:rgn00380]
D RGna_09105 aminotransferase class V-fold PLP-dependent enzyme K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105]
D RGna_12425 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RGna_09185 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:rgn00400]
D RGna_02135 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D RGna_17095 aroF; 3-deoxy-7-phosphoheptulonate synthase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D RGna_17090 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D RGna_08485 type I 3-dehydroquinate dehydratase K03785 aroD; 3-dehydroquinate dehydratase I [EC:4.2.1.10]
D RGna_12810 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D RGna_15955 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D RGna_05425 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D RGna_01390 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D RGna_10090 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D RGna_10085 type 1 glutamine amidotransferase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D RGna_10080 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D RGna_10070 phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D RGna_10840 phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D RGna_10075 indole-3-glycerol phosphate synthase TrpC K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D RGna_10060 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D RGna_10065 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D RGna_02175 prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D RGna_05420 prephenate dehydrogenase/arogenate dehydrogenase family protein K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D RGna_00945 pyridoxal phosphate-dependent aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D RGna_00950 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:rgn00410]
D RGna_12425 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RGna_09185 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RGna_11000 hydA; dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
C 00430 Taurine and hypotaurine metabolism [PATH:rgn00430]
D RGna_02000 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D RGna_15075 phosphate propanoyltransferase K15024 K15024; putative phosphotransacetylase [EC:2.3.1.8]
D RGna_02005 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:rgn00450]
D RGna_03875 aspartate aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D RGna_04075 homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D RGna_12625 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D RGna_14165 FAD-dependent oxidoreductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D RGna_16185 putative selenate reductase subunit YgfK K12527 ygfK; putative selenate reductase [EC:1.97.1.9]
D RGna_15470 molybdopterin dehydrogenase K12529 ygfM; putative selenate reductase FAD-binding subunit
D RGna_17240 selD; selenide, water dikinase SelD K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D RGna_11880 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:rgn00460]
D RGna_12095 beta-glucosidase-related glycosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RGna_14545 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RGna_17030 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RGna_17045 glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RGna_06115 hypothetical protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RGna_14210 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D RGna_06700 aspartate--ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D RGna_00980 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:rgn00470]
D RGna_01475 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D RGna_09965 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RGna_09895 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D RGna_05065 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D RGna_13705 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D RGna_15405 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D RGna_01625 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:rgn00480]
D RGna_10285 hypothetical protein K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D RGna_02875 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D RGna_01445 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D RGna_12395 polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:rgn00511]
D RGna_08355 sialidase K01186 NEU1; sialidase-1 [EC:3.2.1.18]
D RGna_12080 glycoside hydrolase family 2 K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D RGna_14820 glycoside hydrolase family 2 K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D RGna_02770 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D RGna_07950 hypothetical protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D RGna_08645 beta-galactosidase small subunit K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D RGna_11790 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D RGna_04325 alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
D RGna_14480 hypothetical protein K15923 AXY8; alpha-L-fucosidase 2 [EC:3.2.1.51]
D RGna_15215 glycoside hydrolase family 95 protein K15923 AXY8; alpha-L-fucosidase 2 [EC:3.2.1.51]
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:rgn00541]
D RGna_04480 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RGna_08010 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D RGna_17565 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RGna_17560 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D RGna_17570 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D RGna_17605 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D RGna_04835 UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D RGna_11995 neuC; UDP-N-acetylglucosamine 2-epimerase (hydrolyzing) K24257 neuC; UDP-N-acetylglucosamine 2-epimerase (hydrolysing) [EC:3.2.1.183]
D RGna_11985 neuB; N-acetylneuraminate synthase K01654 neuB; N-acetylneuraminate synthase [EC:2.5.1.56]
D RGna_11990 acylneuraminate cytidylyltransferase family protein K00983 neuA; N-acylneuraminate cytidylyltransferase [EC:2.7.7.43]
D RGna_12000 KR domain-containing protein K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-]
D RGna_12005 capsular biosynthesis protein K19068 wbjC; UDP-2-acetamido-2,6-beta-L-arabino-hexul-4-ose reductase [EC:1.1.1.367]
D RGna_12015 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K24258 wbjD; UDP-N-acetyl-L-fucosamine synthase [EC:5.1.3.28]
C 00550 Peptidoglycan biosynthesis [PATH:rgn00550]
D RGna_12815 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D RGna_08740 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D RGna_08900 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D RGna_05065 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D RGna_06315 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D RGna_09965 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RGna_09970 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D RGna_17115 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D RGna_08130 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D RGna_05070 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D RGna_11105 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D RGna_17260 glycosyl transferase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D RGna_03000 penicillin-binding protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D RGna_05075 peptidoglycan glycosyltransferase K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein)
D RGna_05080 penicillin-binding protein 2 K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein)
D RGna_03635 peptidoglycan glycosyltransferase K05364 pbpA; penicillin-binding protein A
D RGna_03030 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D RGna_03840 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D RGna_03860 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D RGna_04620 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D RGna_12640 D-Ala-D-Ala carboxypeptidase VanY K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D RGna_04020 DUF1727 domain-containing protein K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
D RGna_04025 glutamine amidotransferase K07009 gatD; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
C 00552 Teichoic acid biosynthesis [PATH:rgn00552]
D RGna_08130 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D RGna_11960 hypothetical protein K09809 tagF; CDP-glycerol glycerophosphotransferase [EC:2.7.8.12]
D RGna_12040 LytR family transcriptional regulator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D RGna_17630 LytR family transcriptional regulator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D RGna_17645 hypothetical protein K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D RGna_00055 LytR family transcriptional regulator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D RGna_05950 glycosyl transferase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
D RGna_12500 glycosyltransferase family 4 protein K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:rgn00543]
D RGna_07415 MBOAT family protein K19294 algI; alginate O-acetyltransferase complex protein AlgI
D RGna_01105 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:rgn00730]
D RGna_17390 phosphomethylpyrimidine synthase ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D RGna_06715 thiD; bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D RGna_15580 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RGna_04750 nifS; cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RGna_15585 tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D RGna_12565 hydG; [FeFe] hydrogenase H-cluster radical SAM maturase HydG K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19]
D RGna_04125 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D RGna_11445 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D RGna_06730 hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D RGna_06725 thiE; thiamine phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D RGna_06270 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D RGna_06260 thiamine diphosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2]
D RGna_08200 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:rgn00740]
D RGna_04365 bifunctional riboflavin kinase/FAD synthetase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D RGna_06730 hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D RGna_04770 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
C 00750 Vitamin B6 metabolism [PATH:rgn00750]
D RGna_10515 pyridoxamine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D RGna_01425 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D RGna_05690 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D RGna_12220 pyridoxal 5'-phosphate synthase lyase subunit PdxS K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6]
D RGna_12225 pyridoxal 5'-phosphate synthase glutaminase subunit PdxT K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6]
C 00760 Nicotinate and nicotinamide metabolism [PATH:rgn00760]
D RGna_11860 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D RGna_11855 quinolinate synthase NadA K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D RGna_11865 nadC; nicotinate-nucleotide diphosphorylase (carboxylating) K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D RGna_09960 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D RGna_07655 purine-nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D RGna_03145 nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D RGna_07370 NAD(+) diphosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D RGna_16860 NAD(+) synthase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D RGna_02220 CinA family protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D RGna_00165 cysteine hydrolase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D RGna_08320 NAD-dependent protein deacylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D RGna_04115 NAD(+) kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
C 00770 Pantothenate and CoA biosynthesis [PATH:rgn00770]
D RGna_01420 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RGna_05835 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RGna_04460 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D RGna_05830 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D RGna_04455 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D RGna_01415 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D RGna_04650 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D RGna_14395 type III pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D RGna_14385 coaBC; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D RGna_03580 pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D RGna_01715 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D RGna_12635 4'-phosphopantetheinyl transferase K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-]
D RGna_05825 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RGna_11000 hydA; dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D RGna_12425 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RGna_09185 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00780 Biotin metabolism [PATH:rgn00780]
D RGna_08595 fabF; beta-ketoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D RGna_14895 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RGna_08600 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RGna_08585 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D RGna_12570 hydE; [FeFe] hydrogenase H-cluster radical SAM maturase HydE K01012 bioB; biotin synthase [EC:2.8.1.6]
D RGna_14200 bioB; biotin synthase BioB K01012 bioB; biotin synthase [EC:2.8.1.6]
D RGna_12860 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism
C 00790 Folate biosynthesis [PATH:rgn00790]
D RGna_05855 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D RGna_15300 bifunctional folylpolyglutamate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D RGna_15560 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D RGna_15550 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D RGna_15555 molybdenum cofactor biosynthesis protein K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D RGna_02120 molybdenum cofactor biosynthesis protein K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
C 00670 One carbon pool by folate [PATH:rgn00670]
D RGna_05855 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D RGna_01510 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D RGna_01515 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D RGna_02675 bifunctional 5,10-methylenetetrahydrofolate dehydrogenase/5,10-methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D RGna_00980 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RGna_07705 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D RGna_14240 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D RGna_06300 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D RGna_04075 homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D RGna_05860 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D RGna_04085 metF; methylenetetrahydrofolate reductase [NAD(P)H] K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D RGna_02915 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:rgn00860]
D RGna_05535 hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D RGna_05530 cobA; uroporphyrinogen-III C-methyltransferase K13542 cobA-hemD; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75]
D RGna_05490 bifunctional precorrin-2 dehydrogenase/sirohydrochlorin ferrochelatase K24866 sirC; precorrin-2 dehydrogenase [EC:1.3.1.76]
D RGna_05600 sirohydrochlorin cobaltochelatase K02190 cbiK; sirohydrochlorin cobaltochelatase [EC:4.99.1.3]
D RGna_05590 cobI; precorrin-2 C(20)-methyltransferase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151]
D RGna_05580 cobJ; precorrin-3B C(17)-methyltransferase K05934 cobJ; precorrin-3B C17-methyltransferase / cobalt-factor III methyltransferase [EC:2.1.1.131 2.1.1.272]
D RGna_05585 cobM; precorrin-4 C(11)-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271]
D RGna_05635 hypothetical protein K02189 cbiG; cobalt-precorrin 5A hydrolase [EC:3.7.1.12]
D RGna_05630 cobK; precorrin-6A reductase K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106]
D RGna_05595 cbiD; cobalamin biosynthesis protein CbiD K02188 cbiD; cobalt-precorrin-5B (C1)-methyltransferase [EC:2.1.1.195]
D RGna_05575 cbiT; precorrin-6Y C5,15-methyltransferase (decarboxylating) subunit CbiT K00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase / cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196]
D RGna_05495 cbiC; precorrin-8X methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60]
D RGna_05570 cobyrinate a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D RGna_06670 cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D RGna_05625 cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D RGna_05540 cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D RGna_05550 cobD; cobalamin biosynthesis protein CobD K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D RGna_05500 adenosylcobinamide kinase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D RGna_05505 cobalamin biosynthesis protein K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D RGna_05560 cobS; adenosylcobinamide-GDP ribazoletransferase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D RGna_05565 cobT; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D RGna_05555 histidine phosphatase family protein K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73]
D RGna_04965 threonine-phosphate decarboxylase K04720 cobD; threonine-phosphate decarboxylase [EC:4.1.1.81]
D RGna_05545 threonine-phosphate decarboxylase K04720 cobD; threonine-phosphate decarboxylase [EC:4.1.1.81]
D RGna_01600 rubrerythrin family protein K03594 bfr; bacterioferritin [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:rgn00900]
D RGna_04125 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D RGna_11445 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D RGna_17125 1-deoxy-D-xylulose-5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D RGna_14270 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D RGna_09940 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D RGna_01095 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D RGna_00970 flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D RGna_03785 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D RGna_04130 polyprenyl synthetase family protein K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D RGna_17115 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
D RGna_12425 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RGna_09185 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D RGna_13265 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RGna_13270 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RGna_10470 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RGna_10475 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:rgn00523]
D RGna_17565 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RGna_17560 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D RGna_17570 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D RGna_17605 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics [PATH:rgn01055]
D RGna_01260 alpha-hydroxy-acid oxidizing protein K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46]
D RGna_17560 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:rgn00946]
D RGna_12095 beta-glucosidase-related glycosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RGna_14545 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RGna_17030 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RGna_17045 glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RGna_06115 hypothetical protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RGna_12085 alpha-L-rhamnosidase K05989 ramA; alpha-L-rhamnosidase [EC:3.2.1.40]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
D RGna_01955 linear amide C-N hydrolase K24041 yxeI; penicillin V amidase [EC:3.5.1.11]
C 00332 Carbapenem biosynthesis [PATH:rgn00332]
D RGna_00170 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D RGna_00175 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:rgn00261]
D RGna_01260 alpha-hydroxy-acid oxidizing protein K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46]
D RGna_17340 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RGna_03180 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RGna_05710 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D RGna_17290 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D RGna_06865 dihydrodipicolinate synthase family protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D RGna_17295 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:rgn00521]
D RGna_05755 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D RGna_10570 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RGna_17565 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RGna_17560 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D RGna_17570 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D RGna_17605 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D RGna_05755 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:rgn00525]
D RGna_17565 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RGna_17560 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:rgn00401]
D RGna_05420 prephenate dehydrogenase/arogenate dehydrogenase family protein K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D RGna_00945 pyridoxal phosphate-dependent aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D RGna_00950 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D RGna_10090 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D RGna_10085 type 1 glutamine amidotransferase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D RGna_08605 fabD; [acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D RGna_14895 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RGna_08600 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D RGna_02025 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D RGna_08615 acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:rgn00999]
D RGna_12825 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D RGna_01845 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D RGna_09625 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D RGna_12095 beta-glucosidase-related glycosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RGna_14545 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RGna_17030 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RGna_17045 glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RGna_06115 hypothetical protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:rgn00362]
D RGna_03110 ferredoxin K04755 fdx; ferredoxin, 2Fe-2S
D RGna_03815 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D RGna_03820 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D RGna_03825 DUF3887 domain-containing protein K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta
C 00627 Aminobenzoate degradation
D RGna_12575 hypothetical protein K01512 acyP; acylphosphatase [EC:3.6.1.7]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:rgn00625]
D RGna_08150 bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D RGna_12425 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RGna_09185 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation
D RGna_12250 cooS; carbon-monoxide dehydrogenase catalytic subunit K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4]
D RGna_12245 nitrate reductase K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
D RGna_15205 aldo/keto reductase K00002 AKR1A1; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation [PATH:rgn00626]
D RGna_08150 bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:rgn03020]
D RGna_08945 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D RGna_08940 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D RGna_08165 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D RGna_02205 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
D RGna_01035 helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:rgn03010]
D RGna_00825 hypothetical protein K02945 RP-S1; small subunit ribosomal protein S1
D RGna_09375 RNA-binding protein K02945 RP-S1; small subunit ribosomal protein S1
D RGna_16050 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D RGna_08275 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D RGna_08170 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D RGna_08220 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D RGna_10240 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D RGna_08845 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D RGna_08235 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D RGna_13720 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D RGna_08310 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D RGna_08175 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D RGna_08850 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D RGna_08180 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D RGna_08240 type Z 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D RGna_04320 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D RGna_06380 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D RGna_08260 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D RGna_10230 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D RGna_08285 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D RGna_04430 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D RGna_04060 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D RGna_08960 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D RGna_08290 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D RGna_08305 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D RGna_08300 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D RGna_08245 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D RGna_08230 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D RGna_08950 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D RGna_10215 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D RGna_08955 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D RGna_08965 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D RGna_13715 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D RGna_08255 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D RGna_08210 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D RGna_08270 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D RGna_08160 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D RGna_08225 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D RGna_06360 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D RGna_01310 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D RGna_03170 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D RGna_08280 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D RGna_08295 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D RGna_08250 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D RGna_03160 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D RGna_03615 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D RGna_08265 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D RGna_08215 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D RGna_00895 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D RGna_02015 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D RGna_08980 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D RGna_11550 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D RGna_01305 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D RGna_08185 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D RGna_11630 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RGna_11310 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RGna_11300 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:rgn00970]
D RGna_10435 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RGna_11645 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RGna_13105 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RGna_15975 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RGna_11480 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RGna_08015 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RGna_10430 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D RGna_14320 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D RGna_16370 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D RGna_11655 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D RGna_14345 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D RGna_13540 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D RGna_13115 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D RGna_07945 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D RGna_13710 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D RGna_13535 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D RGna_14330 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D RGna_08715 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D RGna_05875 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RGna_12475 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RGna_13100 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RGna_13110 tRNA-His K14226 tRNA-His; tRNA His
D RGna_11640 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D RGna_14325 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D RGna_13125 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RGna_14355 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RGna_08635 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RGna_01315 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RGna_01325 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RGna_11685 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D RGna_13120 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D RGna_13235 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D RGna_01065 tRNA-Met K14230 tRNA-Met; tRNA Met
D RGna_01085 tRNA-Met K14230 tRNA-Met; tRNA Met
D RGna_11675 tRNA-Met K14230 tRNA-Met; tRNA Met
D RGna_14340 tRNA-Met K14230 tRNA-Met; tRNA Met
D RGna_11680 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D RGna_07940 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D RGna_05125 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D RGna_13095 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D RGna_14295 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RGna_11625 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RGna_14300 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RGna_05750 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RGna_11670 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RGna_14335 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RGna_01130 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RGna_15450 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D RGna_11665 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D RGna_01060 tRNA-Val K14237 tRNA-Val; tRNA Val
D RGna_01080 tRNA-Val K14237 tRNA-Val; tRNA Val
D RGna_11660 tRNA-Val K14237 tRNA-Val; tRNA Val
D RGna_14350 tRNA-Val K14237 tRNA-Val; tRNA Val
D RGna_04900 glutamate--tRNA ligase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D RGna_01185 glutamine--tRNA ligase/YqeY domain fusion protein K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D RGna_16005 hypothetical protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D RGna_04065 alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D RGna_05880 aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RGna_10595 asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D RGna_06040 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D RGna_01230 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D RGna_11490 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D RGna_01110 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D RGna_11880 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D RGna_06300 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D RGna_15290 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D RGna_05370 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RGna_11295 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D RGna_12880 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D RGna_16000 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RGna_08860 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D RGna_05885 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D RGna_05665 phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D RGna_05660 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D RGna_10625 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RGna_08030 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:rgn03060]
D RGna_08205 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D RGna_08975 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D RGna_14485 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D RGna_05915 protein translocase subunit SecDF K12257 secDF; SecD/SecF fusion protein
D RGna_06000 protein translocase subunit SecDF K12257 secDF; SecD/SecF fusion protein
D RGna_01405 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D RGna_11535 stage III sporulation protein J K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RGna_17320 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RGna_06385 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D RGna_12665 ffs; signal recognition particle sRNA large type K01983 ffs; SRP RNA
D RGna_02040 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D RGna_12975 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D RGna_06345 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D RGna_06355 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D RGna_03060 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D RGna_07375 signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:rgn04122]
D RGna_15580 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RGna_04750 nifS; cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RGna_04740 tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D RGna_15560 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D RGna_15550 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D RGna_15555 molybdenum cofactor biosynthesis protein K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D RGna_02120 molybdenum cofactor biosynthesis protein K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D RGna_15585 tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
C 03050 Proteasome
C 03018 RNA degradation [PATH:rgn03018]
D RGna_14445 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RGna_04230 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RGna_04315 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D RGna_14490 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D RGna_13585 ATP-dependent RNA helicase DbpA K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D RGna_12330 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D RGna_00885 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D RGna_04775 rny; ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-]
D RGna_15620 RNase J family beta-CASP ribonuclease K12574 rnj; ribonuclease J [EC:3.1.-.-]
D RGna_09900 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D RGna_00770 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D RGna_15940 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RGna_16100 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D RGna_04845 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:rgn03030]
D RGna_12450 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RGna_13355 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RGna_09905 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RGna_00975 PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D RGna_10500 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RGna_11735 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RGna_00670 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RGna_11560 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RGna_10210 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D RGna_01345 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D RGna_13470 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RGna_15760 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RGna_07185 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RGna_10235 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RGna_06340 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D RGna_01710 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RGna_02685 NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D RGna_07400 NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D RGna_09560 NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:rgn03410]
D RGna_12675 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D RGna_10005 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D RGna_14670 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D RGna_08105 sugar fermentation stimulation protein SfsA K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D RGna_13680 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D RGna_15995 deoxyribonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D RGna_01710 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RGna_05905 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D RGna_02685 NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D RGna_07400 NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D RGna_09560 NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:rgn03420]
D RGna_05005 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D RGna_17495 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D RGna_17490 excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D RGna_05765 excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D RGna_16540 pcrA; DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RGna_02425 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RGna_02785 AAA family ATPase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RGna_04895 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RGna_01710 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RGna_02685 NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D RGna_07400 NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D RGna_09560 NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D RGna_01035 helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
C 03430 Mismatch repair [PATH:rgn03430]
D RGna_02950 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D RGna_10155 endonuclease MutS2 K07456 mutS2; DNA mismatch repair protein MutS2
D RGna_02955 DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D RGna_16540 pcrA; DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RGna_02425 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RGna_02785 AAA family ATPase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RGna_04895 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RGna_04140 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D RGna_04135 xseB; exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D RGna_05905 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D RGna_13470 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RGna_15760 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RGna_07185 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RGna_10235 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RGna_09905 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RGna_00975 PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D RGna_11560 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RGna_10500 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RGna_00670 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RGna_11735 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RGna_12450 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RGna_13355 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RGna_02685 NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D RGna_07400 NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D RGna_09560 NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:rgn03440]
D RGna_05905 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D RGna_13470 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RGna_15760 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RGna_07185 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RGna_10235 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RGna_11570 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D RGna_06045 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D RGna_10490 recombination protein RecR K06187 recR; recombination protein RecR
D RGna_04785 recA; recombinase RecA K03553 recA; recombination protein RecA
D RGna_01710 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RGna_03660 Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D RGna_03655 Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D RGna_12165 ATP-binding protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D RGna_03595 DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D RGna_17505 ATP-dependent RecD-like DNA helicase K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D RGna_09775 ATP-dependent RecD-like DNA helicase K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D RGna_09905 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RGna_00975 PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D RGna_11560 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RGna_10500 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RGna_00670 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RGna_11735 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RGna_12450 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RGna_13355 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RGna_06310 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03272 Virion - Hepatitis viruses
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:rgn02010]
D RGna_16205 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D RGna_16210 modB; molybdate ABC transporter permease subunit K02018 modB; molybdate transport system permease protein
D RGna_16215 ABC transporter K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D RGna_01375 spermidine/putrescine ABC transporter permease/substrate-binding protein PotCD K11069 potD; spermidine/putrescine transport system substrate-binding protein
D RGna_01380 ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein
D RGna_01385 ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D RGna_14615 glycine/betaine ABC transporter substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D RGna_14560 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein
D RGna_14620 ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D RGna_10700 ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D RGna_11730 sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D RGna_11755 ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D RGna_06085 maltose ABC transporter substrate-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D RGna_06095 sugar ABC transporter permease K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D RGna_08540 sugar ABC transporter permease K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D RGna_06090 sugar ABC transporter permease K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D RGna_08535 sugar ABC transporter permease K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D RGna_17175 sugar ABC transporter substrate-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D RGna_04350 hypothetical protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D RGna_10310 ABC transporter substrate-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D RGna_17180 sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D RGna_10305 sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D RGna_17190 carbohydrate ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D RGna_10300 carbohydrate ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D RGna_12615 sugar ABC transporter substrate-binding protein K17318 lplA; putative aldouronate transport system substrate-binding protein
D RGna_08440 ABC transporter substrate-binding protein K17318 lplA; putative aldouronate transport system substrate-binding protein
D RGna_08450 sugar ABC transporter permease K17319 lplB; putative aldouronate transport system permease protein
D RGna_08445 carbohydrate ABC transporter permease K17320 lplC; putative aldouronate transport system permease protein
D RGna_08795 carbohydrate ABC transporter substrate-binding protein K10200 ngcE; N-acetylglucosamine transport system substrate-binding protein
D RGna_08790 sugar ABC transporter permease K10201 ngcF; N-acetylglucosamine transport system permease protein
D RGna_08785 carbohydrate ABC transporter permease K10202 ngcG; N-acetylglucosamine transport system permease protein
D RGna_07665 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D RGna_07685 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D RGna_07680 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D RGna_07690 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D RGna_12285 D-ribose ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D RGna_15235 sugar ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D RGna_15255 LacI family transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein
D RGna_04885 sugar ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D RGna_10195 sugar ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D RGna_10725 LacI family transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein
D RGna_12280 rbsC; ribose ABC transporter permease K10440 rbsC; ribose transport system permease protein
D RGna_15240 ABC transporter permease K10440 rbsC; ribose transport system permease protein
D RGna_15250 ABC transporter permease K10440 rbsC; ribose transport system permease protein
D RGna_12275 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D RGna_15245 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D RGna_12270 D-ribose pyranase K06726 rbsD; D-ribose pyranase [EC:5.4.99.62]
D RGna_15130 hypothetical protein K10559 rhaS; rhamnose transport system substrate-binding protein
D RGna_15120 ABC transporter permease K10560 rhaP; rhamnose transport system permease protein
D RGna_15125 hypothetical protein K10561 rhaQ; rhamnose transport system permease protein
D RGna_15115 sugar ABC transporter ATP-binding protein K10562 rhaT; rhamnose transport system ATP-binding protein [EC:7.5.2.-]
D RGna_15365 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D RGna_15370 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D RGna_15375 pstA; phosphate ABC transporter permease PtsA K02038 pstA; phosphate transport system permease protein
D RGna_15380 pstB; phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D RGna_08125 amino acid ABC transporter substrate-binding protein K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein
D RGna_08120 amino acid ABC transporter permease K17077 artQ; arginine/lysine/histidine transport system permease protein
D RGna_08115 glnQ; amino acid ABC transporter ATP-binding protein K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D RGna_11620 metal ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D RGna_11615 ABC transporter permease K02072 metI; D-methionine transport system permease protein
D RGna_11610 ABC transporter K02071 metN; D-methionine transport system ATP-binding protein
D RGna_05510 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D RGna_05525 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D RGna_05520 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D RGna_05515 dipeptide ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D RGna_05850 zinc ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein
D RGna_05840 metal ABC transporter permease K09816 znuB; zinc transport system permease protein
D RGna_05845 metal ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D RGna_05615 cobalt ABC transporter K02009 cbiN; cobalt/nickel transport protein
D RGna_05620 energy-coupling factor ABC transporter permease K02007 cbiM; cobalt/nickel transport system permease protein
D RGna_05610 cbiQ; cobalt ECF transporter T component CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein
D RGna_05605 ABC transporter ATP-binding protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D RGna_09020 biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component
D RGna_10665 energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein
D RGna_10855 energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein
D RGna_10675 energy-coupling factor transporter ATPase K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D RGna_10850 ABC transporter ATP-binding protein K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D RGna_10670 energy-coupling factor transporter ATPase K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D RGna_10845 ABC transporter ATP-binding protein K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D RGna_17575 ABC transporter permease K09690 wzm; homopolymeric O-antigen transport system permease protein
D RGna_17580 ABC transporter ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D RGna_13660 ABC transporter permease K09696 natB; sodium transport system permease protein
D RGna_13655 ABC transporter ATP-binding protein K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D RGna_06975 lantibiotic immunity ABC transporter MutE/EpiE family permease subunit K20491 nisE; lantibiotic transport system permease protein
D RGna_06970 lantibiotic immunity ABC transporter MutG family permease subunit K20492 nisG; lantibiotic transport system permease protein
D RGna_06980 lantibiotic ABC transporter ATP-binding protein K20490 nisF; lantibiotic transport system ATP-binding protein
D RGna_07000 ABC transporter permease K19084 braE; bacitracin transport system permease protein
D RGna_07470 ABC transporter permease K09811 ftsX; cell division transport system permease protein
D RGna_07475 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D RGna_01645 ABC transporter ATP-binding protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D RGna_01650 ABC transporter ATP-binding protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D RGna_03125 ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D RGna_15540 ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D RGna_10775 ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D RGna_13640 ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D RGna_03120 ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D RGna_13645 ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D RGna_10770 ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D RGna_15545 ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D RGna_06950 ABC-F type ribosomal protection protein K19350 lsa; lincosamide and streptogramin A transport system ATP-binding/permease protein
C 02060 Phosphotransferase system (PTS) [PATH:rgn02060]
D RGna_01010 ptsP; phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D RGna_12930 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D RGna_13700 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D RGna_15590 PTS sugar transporter K02784 ptsH; phosphocarrier protein HPr
D RGna_17535 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D RGna_01005 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D RGna_02690 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D RGna_04655 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D RGna_09820 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D RGna_04445 PTS glucose transporter subunit IIA K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
D RGna_10640 PTS glucose transporter subunit IIBC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D RGna_14540 PTS sugar transporter subunit IIA K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D RGna_14470 PTS beta-glucoside transporter subunit EIIBCA K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D RGna_15220 PTS sugar transporter K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D RGna_03435 PTS beta-glucoside transporter subunit EIIBCA K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D RGna_07795 PTS beta-glucoside transporter subunit EIIBCA K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D RGna_07965 PTS beta-glucoside transporter subunit EIIBCA K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D RGna_09075 PTS fructose transporter subunit IIA K19506 gfrA; fructoselysine/glucoselysine PTS system EIIA component [EC:2.7.1.-]
D RGna_12905 PTS mannose/fructose/sorbose transporter subunit IIB K19507 gfrB; fructoselysine/glucoselysine PTS system EIIB component [EC:2.7.1.-]
D RGna_09070 PTS mannose/fructose/sorbose transporter subunit IIB K19507 gfrB; fructoselysine/glucoselysine PTS system EIIB component [EC:2.7.1.-]
D RGna_12910 PTS sugar transporter subunit IIC K19508 gfrC; fructoselysine/glucoselysine PTS system EIIC component
D RGna_09065 PTS sugar transporter subunit IIC K19508 gfrC; fructoselysine/glucoselysine PTS system EIIC component
D RGna_12915 PTS mannose transporter subunit IID K19509 gfrD; fructoselysine/glucoselysine PTS system EIID component
D RGna_09060 PTS mannose transporter subunit IID K19509 gfrD; fructoselysine/glucoselysine PTS system EIID component
D RGna_14770 PTS sugar transporter subunit IIA K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-]
D RGna_14780 PTS system mannose/fructose/N-acetylgalactosamine-transporter subunit IIB K02745 agaV; N-acetylgalactosamine PTS system EIIB component [EC:2.7.1.-]
D RGna_14785 PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC K02746 agaW; N-acetylgalactosamine PTS system EIIC component
D RGna_14790 PTS N-acetylgalactosamine transporter subunit IID K02747 agaE; N-acetylgalactosamine PTS system EIID component
D RGna_07635 PTS sugar transporter subunit IIA K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D RGna_07625 PTS lactose transporter subunit IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D RGna_07630 PTS ascorbate transporter subunit IIC K03475 ulaA; ascorbate PTS system EIIC component
D RGna_04940 pfkB; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
C 03070 Bacterial secretion system [PATH:rgn03070]
D RGna_05915 protein translocase subunit SecDF K12257 secDF; SecD/SecF fusion protein
D RGna_06000 protein translocase subunit SecDF K12257 secDF; SecD/SecF fusion protein
D RGna_08975 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D RGna_14485 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D RGna_08205 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D RGna_01405 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D RGna_11535 stage III sporulation protein J K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RGna_17320 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RGna_02040 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D RGna_06385 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D RGna_13525 hypothetical protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D RGna_13780 type IV secretory system conjugative DNA transfer family protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D RGna_09370 ATPase K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:rgn02020]
D RGna_15395 two-component sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D RGna_15390 DNA-binding response regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D RGna_17400 DNA-binding response regulator K07776 regX3; two-component system, OmpR family, response regulator RegX3
D RGna_15365 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D RGna_17660 PDZ domain-containing protein K04771 degP; serine protease Do [EC:3.4.21.107]
D RGna_10150 serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D RGna_04495 sensor histidine kinase KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D RGna_04550 sensor histidine kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D RGna_04545 DNA-binding response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D RGna_08930 DNA-binding response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D RGna_04510 potassium-transporting ATPase subunit KdpA K01546 kdpA; potassium-transporting ATPase potassium-binding subunit
D RGna_04505 kdpB; K(+)-transporting ATPase subunit B K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6]
D RGna_04500 potassium-transporting ATPase subunit KdpC K01548 kdpC; potassium-transporting ATPase KdpC subunit
D RGna_14650 DNA-binding response regulator K07775 resD; two-component system, OmpR family, response regulator ResD
D RGna_11555 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D RGna_07000 ABC transporter permease K19084 braE; bacitracin transport system permease protein
D RGna_06810 sensor histidine kinase K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3]
D RGna_06815 DNA-binding response regulator K19082 braR; two-component system, OmpR family, response regulator protein BraR/BceR
D RGna_14655 HAMP domain-containing protein K18345 vanSB; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D RGna_01745 sensor histidine kinase K18345 vanSB; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D RGna_12640 D-Ala-D-Ala carboxypeptidase VanY K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D RGna_16680 sensor histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D RGna_06960 sensor histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D RGna_16675 DNA-binding response regulator K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
D RGna_06965 DNA-binding response regulator K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
D RGna_06980 lantibiotic ABC transporter ATP-binding protein K20490 nisF; lantibiotic transport system ATP-binding protein
D RGna_06975 lantibiotic immunity ABC transporter MutE/EpiE family permease subunit K20491 nisE; lantibiotic transport system permease protein
D RGna_06970 lantibiotic immunity ABC transporter MutG family permease subunit K20492 nisG; lantibiotic transport system permease protein
D RGna_04095 spo0A; sporulation transcription factor Spo0A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A
D RGna_08760 hypothetical protein K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A
D RGna_00880 NADP-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D RGna_13655 ABC transporter ATP-binding protein K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D RGna_13660 ABC transporter permease K09696 natB; sodium transport system permease protein
D RGna_16015 pilus assembly protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D RGna_11170 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D RGna_11165 type II secretion system protein F K12510 tadB; tight adherence protein B
D RGna_11160 secretion protein F K12511 tadC; tight adherence protein C
D RGna_05645 P-II family nitrogen regulator K04751 glnB; nitrogen regulatory protein P-II 1
D RGna_14740 type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RGna_08705 glutamine synthetase type III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RGna_09035 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D RGna_03450 hypothetical protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RGna_07660 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RGna_12610 sensor histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D RGna_15230 sensor histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D RGna_04360 sensor histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D RGna_09830 sensor histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D RGna_10315 sensor histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D RGna_12605 DNA-binding response regulator K07720 yesN; two-component system, response regulator YesN
D RGna_14815 AraC family transcriptional regulator K07720 yesN; two-component system, response regulator YesN
D RGna_15225 DNA-binding response regulator K07720 yesN; two-component system, response regulator YesN
D RGna_04355 DNA-binding response regulator K07720 yesN; two-component system, response regulator YesN
D RGna_09825 DNA-binding response regulator K07720 yesN; two-component system, response regulator YesN
D RGna_10320 DNA-binding response regulator K07720 yesN; two-component system, response regulator YesN
D RGna_03890 low molecular weight phosphotyrosine protein phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D RGna_09840 cellulase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D RGna_09845 hypothetical protein K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:rgn02024]
D RGna_04865 S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D RGna_10090 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D RGna_10085 type 1 glutamine amidotransferase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D RGna_02135 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D RGna_04545 DNA-binding response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D RGna_08930 DNA-binding response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D RGna_03450 hypothetical protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RGna_07660 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RGna_00205 EamA-like transporter family protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D RGna_05510 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D RGna_05525 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D RGna_05520 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D RGna_05515 dipeptide ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D RGna_06190 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RGna_06185 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RGna_06165 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RGna_06160 dipeptide ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D RGna_11535 stage III sporulation protein J K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RGna_05915 protein translocase subunit SecDF K12257 secDF; SecD/SecF fusion protein
D RGna_06000 protein translocase subunit SecDF K12257 secDF; SecD/SecF fusion protein
D RGna_08975 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D RGna_14485 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D RGna_08205 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D RGna_01405 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D RGna_17320 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RGna_02040 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D RGna_06385 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D RGna_04095 spo0A; sporulation transcription factor Spo0A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A
D RGna_08760 hypothetical protein K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A
D RGna_09680 phospholipase K01114 plc; phospholipase C [EC:3.1.4.3]
D RGna_14185 transcriptional regulator K20480 nprR; HTH-type transcriptional regulator, quorum sensing regulator NprR
D RGna_16680 sensor histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D RGna_06960 sensor histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D RGna_16675 DNA-binding response regulator K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
D RGna_06965 DNA-binding response regulator K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
D RGna_06980 lantibiotic ABC transporter ATP-binding protein K20490 nisF; lantibiotic transport system ATP-binding protein
D RGna_06975 lantibiotic immunity ABC transporter MutE/EpiE family permease subunit K20491 nisE; lantibiotic transport system permease protein
D RGna_06970 lantibiotic immunity ABC transporter MutG family permease subunit K20492 nisG; lantibiotic transport system permease protein
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
D RGna_12285 D-ribose ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D RGna_15235 sugar ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D RGna_15255 LacI family transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein
D RGna_04885 sugar ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D RGna_10195 sugar ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D RGna_10725 LacI family transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein
C 02040 Flagellar assembly [PATH:rgn02040]
D RGna_17305 RNA polymerase subunit sigma K03086 rpoD; RNA polymerase primary sigma factor
D RGna_01350 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D RGna_09035 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D RGna_14445 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RGna_04230 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism [PATH:rgn04980]
D RGna_06670 cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D RGna_04075 homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:rgn01501]
D RGna_05510 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D RGna_05525 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D RGna_05520 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D RGna_05515 dipeptide ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D RGna_02080 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D RGna_17260 glycosyl transferase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D RGna_03000 penicillin-binding protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:rgn01502]
D RGna_14655 HAMP domain-containing protein K18345 vanSB; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D RGna_01745 sensor histidine kinase K18345 vanSB; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D RGna_09965 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RGna_01475 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D RGna_09970 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D RGna_05070 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D RGna_11105 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D RGna_12640 D-Ala-D-Ala carboxypeptidase VanY K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:rgn01503]
D RGna_02240 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D RGna_08755 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D RGna_11205 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D RGna_17660 PDZ domain-containing protein K04771 degP; serine protease Do [EC:3.4.21.107]
D RGna_10150 serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:rgn01000]
C 01001 Protein kinases [BR:rgn01001]
D RGna_06275 pknB; Stk1 family PASTA domain-containing Ser/Thr kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D RGna_12060 tyrosine protein kinase K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D RGna_15395 two-component sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D RGna_04495 sensor histidine kinase KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D RGna_04550 sensor histidine kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D RGna_06810 sensor histidine kinase K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3]
D RGna_14655 HAMP domain-containing protein K18345 vanSB; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D RGna_01745 sensor histidine kinase K18345 vanSB; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D RGna_16680 sensor histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D RGna_06960 sensor histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D RGna_12610 sensor histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D RGna_15230 sensor histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D RGna_04360 sensor histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D RGna_09830 sensor histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D RGna_10315 sensor histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:rgn01009]
D RGna_09900 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D RGna_07445 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D RGna_06280 Stp1/IreP family PP2C-type Ser/Thr phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
C 01002 Peptidases and inhibitors [BR:rgn01002]
D RGna_03060 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D RGna_07375 signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D RGna_11140 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D RGna_04425 GPR endopeptidase K06012 gpr; spore protease [EC:3.4.24.78]
D RGna_05045 hypothetical protein K06383 spoIIGA; stage II sporulation protein GA (sporulation sigma-E factor processing peptidase) [EC:3.4.23.-]
D RGna_09805 glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D RGna_00145 gamma-glutamyl-gamma-aminobutyrate hydrolase K07010 K07010; putative glutamine amidotransferase
D RGna_16040 hypothetical protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D RGna_08140 cell wall hydrolase K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D RGna_11255 hydrolase K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D RGna_04925 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D RGna_14730 glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D RGna_17655 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D RGna_14725 asparagine synthase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D RGna_05115 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D RGna_06735 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D RGna_09110 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D RGna_17355 DJ-1 family protein K03152 thiJ; protein deglycase [EC:3.5.1.124]
D RGna_01955 linear amide C-N hydrolase K24041 yxeI; penicillin V amidase [EC:3.5.1.11]
D RGna_13410 class C sortase K07284 srtA; sortase A [EC:3.4.22.70]
D RGna_09235 class C sortase K07284 srtA; sortase A [EC:3.4.22.70]
D RGna_12035 srtB; SrtB family sortase K08600 srtB; sortase B [EC:3.4.22.71]
D RGna_12985 srtB; SrtB family sortase K08600 srtB; sortase B [EC:3.4.22.71]
D RGna_13420 class B sortase K08600 srtB; sortase B [EC:3.4.22.71]
D RGna_01825 class B sortase K08600 srtB; sortase B [EC:3.4.22.71]
D RGna_09760 srtB; SrtB family sortase K08600 srtB; sortase B [EC:3.4.22.71]
D RGna_10250 srtB; SrtB family sortase K08600 srtB; sortase B [EC:3.4.22.71]
D RGna_12335 CPBP family intramembrane metalloprotease K07052 K07052; CAAX protease family protein
D RGna_12520 CPBP family intramembrane metalloprotease domain-containing protein K07052 K07052; CAAX protease family protein
D RGna_13950 CPBP family intramembrane metalloprotease K07052 K07052; CAAX protease family protein
D RGna_16010 CPBP family intramembrane metalloprotease K07052 K07052; CAAX protease family protein
D RGna_01985 CPBP family intramembrane metalloprotease K07052 K07052; CAAX protease family protein
D RGna_12640 D-Ala-D-Ala carboxypeptidase VanY K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D RGna_06060 peptidase M16 K06972 PITRM1; presequence protease [EC:3.4.24.-]
D RGna_10285 hypothetical protein K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D RGna_00150 membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D RGna_07360 pepT; peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D RGna_02875 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D RGna_12130 amidohydrolase K12941 abgB; aminobenzoyl-glutamate utilization protein B
D RGna_03565 M23 family peptidase K21472 lytH; peptidoglycan LD-endopeptidase LytH [EC:3.4.-.-]
D RGna_10510 methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D RGna_03805 peptidase M24 K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D RGna_01075 aminopeptidase K19689 ampS; aminopeptidase [EC:3.4.11.-]
D RGna_05770 ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D RGna_07805 ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D RGna_10525 ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D RGna_17130 rseP; RIP metalloprotease RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D RGna_17660 PDZ domain-containing protein K04771 degP; serine protease Do [EC:3.4.21.107]
D RGna_10150 serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D RGna_13145 peptidase S8 K14647 vpr; minor extracellular serine protease Vpr [EC:3.4.21.-]
D RGna_06395 peptidase S8 K17734 aprX; serine protease AprX [EC:3.4.21.-]
D RGna_03030 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D RGna_03840 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D RGna_03860 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D RGna_04620 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D RGna_17365 clpP; ATP-dependent Clp endopeptidase, proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D RGna_00430 Clp protease ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D RGna_17375 lon; endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D RGna_03130 transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D RGna_12975 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D RGna_06345 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D RGna_06355 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D RGna_07460 S41 family peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D RGna_09395 peptidase S41 K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D RGna_04100 spoIVB; SpoIVB peptidase K06399 spoIVB; stage IV sporulation protein B [EC:3.4.21.116]
D RGna_15795 HK97 family phage prohead protease K06904 GP4; Escherichia/Staphylococcus phage prohead protease
D RGna_15630 peptidase U32 K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D RGna_03645 U32 family peptidase K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D RGna_09085 peptidase U32 K08303 prtC; U32 family peptidase [EC:3.4.-.-]
C 01003 Glycosyltransferases [BR:rgn01003]
D RGna_12500 glycosyltransferase family 4 protein K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D RGna_05950 glycosyl transferase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
D RGna_04090 glycogen synthase GlgA K00703 glgA; starch synthase [EC:2.4.1.21]
D RGna_17260 glycosyl transferase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:rgn01005]
D RGna_17550 glycosyltransferase K12999 rgpI; glucosyltransferase [EC:2.4.1.-]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:rgn01011]
D RGna_12815 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D RGna_08740 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D RGna_08900 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D RGna_05065 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D RGna_06315 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D RGna_09965 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RGna_01475 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D RGna_09895 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D RGna_05070 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D RGna_11105 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D RGna_08130 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D RGna_17260 glycosyl transferase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D RGna_03000 penicillin-binding protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D RGna_05075 peptidoglycan glycosyltransferase K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein)
D RGna_05080 penicillin-binding protein 2 K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein)
D RGna_07590 hypothetical protein K21467 pbpC; penicillin-binding protein 3
D RGna_03635 peptidoglycan glycosyltransferase K05364 pbpA; penicillin-binding protein A
D RGna_03030 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D RGna_03840 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D RGna_03860 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D RGna_04620 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D RGna_12640 D-Ala-D-Ala carboxypeptidase VanY K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D RGna_16040 hypothetical protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D RGna_08140 cell wall hydrolase K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D RGna_11255 hydrolase K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D RGna_03565 M23 family peptidase K21472 lytH; peptidoglycan LD-endopeptidase LytH [EC:3.4.-.-]
D RGna_13410 class C sortase K07284 srtA; sortase A [EC:3.4.22.70]
D RGna_09235 class C sortase K07284 srtA; sortase A [EC:3.4.22.70]
D RGna_12035 srtB; SrtB family sortase K08600 srtB; sortase B [EC:3.4.22.71]
D RGna_12985 srtB; SrtB family sortase K08600 srtB; sortase B [EC:3.4.22.71]
D RGna_13420 class B sortase K08600 srtB; sortase B [EC:3.4.22.71]
D RGna_01825 class B sortase K08600 srtB; sortase B [EC:3.4.22.71]
D RGna_09760 srtB; SrtB family sortase K08600 srtB; sortase B [EC:3.4.22.71]
D RGna_10250 srtB; SrtB family sortase K08600 srtB; sortase B [EC:3.4.22.71]
D RGna_11280 SpoIID/LytB domain-containing protein K06381 spoIID; stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:4.2.2.29]
D RGna_02240 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D RGna_08755 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D RGna_11205 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:rgn01004]
D RGna_08605 fabD; [acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D RGna_08620 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D RGna_08595 fabF; beta-ketoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D RGna_14895 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RGna_08600 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RGna_08585 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D RGna_08610 fabK; enoyl-[acyl-carrier-protein] reductase FabK K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D RGna_02020 phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D RGna_02105 plsY; acyl-phosphate glycerol 3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D RGna_05955 glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D RGna_09955 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D RGna_11600 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:rgn01008]
D RGna_01260 alpha-hydroxy-acid oxidizing protein K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46]
C 01006 Prenyltransferases [BR:rgn01006]
D RGna_04130 polyprenyl synthetase family protein K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D RGna_17115 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D RGna_02960 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
C 01007 Amino acid related enzymes [BR:rgn01007]
D RGna_01185 glutamine--tRNA ligase/YqeY domain fusion protein K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D RGna_04900 glutamate--tRNA ligase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D RGna_10625 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RGna_08030 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D RGna_01110 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D RGna_16000 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RGna_11880 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D RGna_11295 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D RGna_15290 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D RGna_05370 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RGna_12880 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D RGna_05880 aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RGna_10595 asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D RGna_05885 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D RGna_06040 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D RGna_11490 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D RGna_08860 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D RGna_01230 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D RGna_16005 hypothetical protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D RGna_04065 alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D RGna_05665 phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D RGna_05660 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D RGna_00945 pyridoxal phosphate-dependent aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D RGna_14750 LL-diaminopimelate aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D RGna_01255 LL-diaminopimelate aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D RGna_12690 aminotransferase class V-fold PLP-dependent enzyme K10907 K10907; aminotransferase [EC:2.6.1.-]
D RGna_00950 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RGna_03875 aspartate aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D RGna_00200 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D RGna_05825 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RGna_01425 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:rgn00194]
D RGna_12210 atpC; ATP synthase F1 subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D RGna_12205 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D RGna_12200 atpG; ATP synthase F1 subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D RGna_12195 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D RGna_12190 atpH; F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D RGna_12185 atpF; ATP synthase F0 subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D RGna_12180 atpE; ATP synthase F0 subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D RGna_12175 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:rgn03000]
D RGna_00255 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RGna_00380 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RGna_01805 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RGna_14160 LysR family transcriptional regulator K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon
D RGna_04945 DeoR/GlpR transcriptional regulator K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D RGna_09835 spoIIID; sporulation transcriptional regulator SpoIIID K06283 spoIIID; putative DeoR family transcriptional regulator, stage III sporulation protein D
D RGna_12260 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D RGna_13255 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D RGna_15185 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D RGna_00710 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D RGna_04585 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D RGna_10485 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D RGna_11325 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D RGna_14800 LacI family transcriptional regulator K02525 kdgR; LacI family transcriptional regulator, kdg operon repressor
D RGna_08550 LacI family transcriptional regulator K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
D RGna_16130 LacI family transcriptional regulator K03484 scrR; LacI family transcriptional regulator, sucrose operon repressor
D RGna_06785 LacI family transcriptional regulator K03484 scrR; LacI family transcriptional regulator, sucrose operon repressor
D RGna_16090 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D RGna_05430 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D RGna_06915 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D RGna_06920 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D RGna_17155 FadR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D RGna_04665 FadR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D RGna_01190 PLP-dependent aminotransferase family protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D RGna_07435 TetR/AcrR family transcriptional regulator K09017 rutR; TetR/AcrR family transcriptional regulator
D RGna_10025 TetR/AcrR family transcriptional regulator K09017 rutR; TetR/AcrR family transcriptional regulator
D RGna_07355 TetR/AcrR family transcriptional regulator K22107 kstR; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator
D RGna_13800 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D RGna_08335 MerR family transcriptional regulator K21745 adhR; MerR family transcriptional regulator, aldehyde-responsive regulator
D RGna_15615 transcriptional repressor K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D RGna_16905 Fur family transcriptional regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D RGna_15165 IclR family transcriptional regulator K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
D RGna_03450 hypothetical protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RGna_07660 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RGna_07585 Crp/Fnr family transcriptional regulator K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D RGna_04755 Rrf2 family transcriptional regulator K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor
D RGna_00990 Rrf2 family transcriptional regulator K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor
D RGna_10185 ArsR family transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D RGna_14845 transcriptional regulator K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor
D RGna_11380 transcriptional regulator K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor
D RGna_01690 ArsR family transcriptional regulator K26993 sdpR; ArsR family transcriptional regulator, repressor of sdpIR and other operons
D RGna_12370 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator
D RGna_06820 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator
D RGna_07515 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator
D RGna_16900 metal-dependent transcriptional regulator K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D RGna_07800 MurR/RpiR family transcriptional regulator K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator
D RGna_02080 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D RGna_12860 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D RGna_14185 transcriptional regulator K20480 nprR; HTH-type transcriptional regulator, quorum sensing regulator NprR
D RGna_01620 TrmB family transcriptional regulator K23356 trmB; HTH-type transcriptional regulator, sugar sensing transcriptional regulator
D RGna_09040 PRD domain-containing protein K19505 gfrR; sigma-54 dependent transcriptional regulator, gfr operon transcriptional activator
D RGna_03230 CdaR family transcriptional regulator K02647 cdaR; carbohydrate diacid regulator
D RGna_07480 CdaR family transcriptional regulator K02647 cdaR; carbohydrate diacid regulator
D RGna_10705 PucR family transcriptional regulator K02647 cdaR; carbohydrate diacid regulator
D RGna_16220 molybdenum transporter K02019 modE; molybdate transport system regulatory protein
D RGna_01465 redox-sensing transcriptional repressor Rex K01926 rex; redox-sensing transcriptional repressor
D RGna_15925 GTP-sensing pleiotropic transcriptional regulator CodY K03706 codY; transcriptional pleiotropic repressor
D RGna_13790 transcriptional regulator K07727 K07727; putative transcriptional regulator
D RGna_16250 XRE family transcriptional regulator K07727 K07727; putative transcriptional regulator
D RGna_01135 XRE family transcriptional regulator K07727 K07727; putative transcriptional regulator
D RGna_02460 Cro/Cl family transcriptional regulator K07727 K07727; putative transcriptional regulator
D RGna_02635 XRE family transcriptional regulator K07727 K07727; putative transcriptional regulator
D RGna_02655 XRE family transcriptional regulator K07727 K07727; putative transcriptional regulator
D RGna_14465 PRD domain-containing protein K03488 licT; beta-glucoside operon transcriptional antiterminator
D RGna_07970 PRD domain-containing protein K03488 licT; beta-glucoside operon transcriptional antiterminator
D RGna_10650 PRD domain-containing protein K03488 licT; beta-glucoside operon transcriptional antiterminator
D RGna_04440 transcription antiterminator BglG K03480 glcT; transcriptional antiterminator
D RGna_14550 PRD domain-containing protein K03491 licR; probable licABCH operon transcriptional regulator
D RGna_05450 metal-sensitive transcriptional repressor K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D RGna_05930 spoVT; stage V sporulation protein T K04769 spoVT; AbrB family transcriptional regulator, stage V sporulation protein T
D RGna_13325 hypothetical protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RGna_13740 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RGna_15745 DUF3850 domain-containing protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RGna_16955 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RGna_11500 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RGna_06110 glycerol-3-phosphate responsive antiterminator K02443 glpP; glycerol uptake operon antiterminator
D RGna_04110 argR; arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D RGna_00760 hrcA; heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D RGna_13670 transcriptional repressor NrdR K07738 nrdR; transcriptional repressor NrdR
D RGna_05095 transcriptional regulator MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:rgn03021]
D RGna_01035 helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
D RGna_08165 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D RGna_08945 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D RGna_08940 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D RGna_02205 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D RGna_17305 RNA polymerase subunit sigma K03086 rpoD; RNA polymerase primary sigma factor
D RGna_01350 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D RGna_14110 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D RGna_09815 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D RGna_01450 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D RGna_01165 RNA polymerase subunit sigma-70 K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D RGna_13595 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D RGna_11040 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D RGna_15320 sigF; RNA polymerase sporulation sigma factor SigF K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D RGna_15635 sigK; RNA polymerase sporulation sigma factor SigK K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D RGna_05030 RNA polymerase sporulation sigma factor SigG K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D RGna_05040 RNA polymerase sporulation sigma factor SigE K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D RGna_01125 RNA polymerase sporulation sigma factor SigH K27000 sigH; RNA polymerase sigma-H factor
D RGna_09035 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D RGna_04400 transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D RGna_04145 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D RGna_08970 transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D RGna_12875 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D RGna_04690 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D RGna_00885 transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:rgn03019]
D RGna_02030 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D RGna_15620 RNase J family beta-CASP ribonuclease K12574 rnj; ribonuclease J [EC:3.1.-.-]
D RGna_04775 rny; ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-]
D RGna_14490 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D RGna_10145 HD domain-containing protein K03698 cbf; 3'-5' exoribonuclease [EC:3.1.-.-]
D RGna_13585 ATP-dependent RNA helicase DbpA K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D RGna_12330 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D RGna_14445 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RGna_04230 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RGna_04315 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D RGna_00885 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D RGna_09900 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D RGna_00770 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D RGna_15940 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RGna_16100 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D RGna_04845 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D RGna_08735 RNase adapter RapZ K06958 rapZ; RNase adapter protein RapZ
C 03041 Spliceosome
C 03011 Ribosome [BR:rgn03011]
D RGna_00825 hypothetical protein K02945 RP-S1; small subunit ribosomal protein S1
D RGna_09375 RNA-binding protein K02945 RP-S1; small subunit ribosomal protein S1
D RGna_16050 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D RGna_08275 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D RGna_08170 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D RGna_08220 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D RGna_10240 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D RGna_08845 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D RGna_08235 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D RGna_13720 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D RGna_08310 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D RGna_08175 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D RGna_08850 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D RGna_08180 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D RGna_08240 type Z 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D RGna_04320 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D RGna_06380 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D RGna_08260 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D RGna_10230 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D RGna_08285 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D RGna_04430 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D RGna_04060 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D RGna_08960 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D RGna_08290 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D RGna_08305 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D RGna_08300 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D RGna_08245 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D RGna_08230 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D RGna_10215 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D RGna_08955 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D RGna_08965 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D RGna_08950 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D RGna_13715 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D RGna_08255 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D RGna_08210 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D RGna_08270 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D RGna_08160 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D RGna_08225 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D RGna_06360 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D RGna_01310 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D RGna_03170 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D RGna_08280 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D RGna_08295 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D RGna_08250 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D RGna_03160 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D RGna_03615 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D RGna_08265 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D RGna_08215 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D RGna_00895 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D RGna_02015 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D RGna_08980 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D RGna_11550 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D RGna_01305 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D RGna_08185 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D RGna_11630 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RGna_11310 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RGna_11300 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:rgn03009]
D RGna_02030 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D RGna_06055 GTPase Era K03595 era; GTPase
D RGna_03155 GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-]
D RGna_04400 transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D RGna_04145 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D RGna_08970 transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D RGna_03555 rRNA pseudouridine synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D RGna_11020 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D RGna_06290 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D RGna_03585 rsmD; 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D RGna_15575 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D RGna_11515 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D RGna_05090 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D RGna_11750 rsmI; 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D RGna_04120 TlyA family rRNA (cytidine-2'-O)-methyltransferase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D RGna_01120 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D RGna_01560 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D RGna_08315 SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D RGna_06285 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D RGna_16550 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D RGna_10140 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D RGna_03530 RluA family pseudouridine synthase K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D RGna_14375 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D RGna_03065 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D RGna_08875 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D RGna_07405 23S rRNA pseudouridine(2604) synthase RluF K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
D RGna_06370 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D RGna_02210 rimO; 30S ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D RGna_15570 50S ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D RGna_15605 Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D RGna_01115 ribonuclease III K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-]
D RGna_13585 ATP-dependent RNA helicase DbpA K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D RGna_06270 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D RGna_02100 ribosome biogenesis GTPase Der K03977 engA; GTPase
D RGna_06350 ylqF; ribosome biogenesis GTPase YlqF K14540 rbgA; ribosome biogenesis GTPase A
D RGna_14870 hflX; GTPase HflX K03665 hflX; GTPase
D RGna_11200 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D RGna_05900 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D RGna_04380 30S ribosome-binding factor RbfA K02834 rbfA; ribosome-binding factor A
D RGna_04405 ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP
D RGna_11565 RNA-binding S4 domain-containing protein K14761 rlbA; ribosome-associated protein
D RGna_03135 rsfS; ribosome silencing factor K09710 ybeB; ribosome-associated protein
D RGna_02895 rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor
D RGna_03150 yhbY; ribosome assembly RNA-binding protein YhbY K07574 yhbY; RNA-binding protein
D RGna_17270 raiA; ribosome-associated translation inhibitor RaiA K05808 hpf; ribosome hibernation promoting factor
D RGna_06205 redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase
D RGna_02010 DUF177 domain-containing protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:rgn03016]
D RGna_14260 ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D RGna_10580 CCA tRNA nucleotidyltransferase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D RGna_08860 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D RGna_11295 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D RGna_05370 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RGna_11880 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D RGna_01185 glutamine--tRNA ligase/YqeY domain fusion protein K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D RGna_16000 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RGna_12880 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D RGna_05880 aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RGna_16005 hypothetical protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D RGna_04065 alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D RGna_10595 asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D RGna_06040 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D RGna_01230 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D RGna_11490 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D RGna_01110 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D RGna_15290 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D RGna_05885 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D RGna_05665 phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D RGna_05660 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D RGna_10625 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RGna_08030 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D RGna_01145 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D RGna_11115 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D RGna_13225 tRNA (guanosine(46)-N7)-methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D RGna_13675 tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D RGna_06645 hypothetical protein K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D RGna_10660 tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D RGna_04370 tRNA pseudouridine(55) synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D RGna_15580 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RGna_04750 nifS; cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RGna_11200 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D RGna_02960 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D RGna_11525 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D RGna_11520 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D RGna_17240 selD; selenide, water dikinase SelD K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D RGna_11545 ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D RGna_04900 glutamate--tRNA ligase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D RGna_03185 ybaK; Cys-tRNA(Pro) deacylase K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D RGna_12660 tRNA adenosine(34) deaminase TadA K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D RGna_12870 tRNA dihydrouridine synthase DusB K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D RGna_02940 miaB; tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D RGna_15595 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase MtaB K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
D RGna_06365 tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D RGna_01355 SAM-dependent methyltransferase K06967 trmK; tRNA (adenine22-N1)-methyltransferase [EC:2.1.1.217]
D RGna_12695 tRNA (cytidine(34)-2'-O)-methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D RGna_12850 RNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family
D RGna_04740 tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D RGna_03090 tRNA 2-thiocytidine(32) synthetase TtcA K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D RGna_07835 ATPase K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D RGna_05655 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D RGna_05720 hypothetical protein K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6]
D RGna_01400 tRNA-guanine(34) transglycosylase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D RGna_15585 tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D RGna_10535 tilS; tRNA lysidine(34) synthetase TilS K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D RGna_14250 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D RGna_14265 tsaD; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D RGna_14245 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D RGna_00860 tRNA threonylcarbamoyladenosine dehydratase K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D RGna_01990 nucleotidyltransferase K27343 tmcAL; tRNAmet cytidine acetate ligase [EC:6.3.1.22]
D RGna_14490 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D RGna_04315 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:rgn03012]
D RGna_04385 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D RGna_01300 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D RGna_01460 ABC transporter ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D RGna_16055 elongation factor Ts K02357 tsf; elongation factor Ts
D RGna_08835 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D RGna_05415 fusA; elongation factor G K02355 fusA; elongation factor G
D RGna_08840 fusA; elongation factor G K02355 fusA; elongation factor G
D RGna_00910 peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D RGna_17110 ribosome recycling factor K02838 frr; ribosome recycling factor
D RGna_00905 prmC; peptide chain release factor N(5)-glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D RGna_05010 aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D RGna_08190 translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D RGna_15965 efp; elongation factor P K02356 efp; elongation factor P
D RGna_17325 peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D RGna_04155 peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
C 03110 Chaperones and folding catalysts [BR:rgn03110]
D RGna_07345 clpB; ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D RGna_15415 ATP-dependent Clp protease ATP-binding subunit K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D RGna_17370 ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D RGna_07395 ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D RGna_07445 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D RGna_00770 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D RGna_15940 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RGna_00775 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D RGna_07820 J domain-containing protein K03686 dnaJ; molecular chaperone DnaJ
D RGna_08655 J domain-containing protein K03686 dnaJ; molecular chaperone DnaJ
D RGna_11330 molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D RGna_16855 Hsp33 family molecular chaperone HslO K04083 hslO; molecular chaperone Hsp33
D RGna_00765 nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D RGna_11335 Hsp20/alpha crystallin family protein K13993 HSP20; HSP20 family protein
D RGna_15935 co-chaperone GroES K04078 groES; chaperonin GroES
D RGna_17660 PDZ domain-containing protein K04771 degP; serine protease Do [EC:3.4.21.107]
D RGna_10150 serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D RGna_05770 ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D RGna_07805 ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D RGna_10525 ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D RGna_12175 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D RGna_09000 hydrogenase nickel incorporation protein HypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF
D RGna_08990 hypB; hydrogenase accessory protein HypB K04652 hypB; hydrogenase nickel incorporation protein HypB
D RGna_13145 peptidase S8 K14647 vpr; minor extracellular serine protease Vpr [EC:3.4.21.-]
D RGna_06010 peptidylprolyl isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D RGna_10685 peptidylprolyl isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D RGna_01700 peptidylprolyl isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D RGna_13230 thiol reductase thioredoxin K03671 TXN; thioredoxin
D RGna_07580 trxA; thioredoxin K03671 TXN; thioredoxin
C 04131 Membrane trafficking [BR:rgn04131]
D RGna_03225 flotillin K07192 FLOT; flotillin
D RGna_04730 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RGna_01615 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RGna_07445 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D RGna_13550 MFS transporter K06902 UMF1; MFS transporter, UMF1 family
C 04121 Ubiquitin system
C 03051 Proteasome [BR:rgn03051]
D RGna_07445 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:rgn03032]
D RGna_00255 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RGna_00380 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RGna_01805 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RGna_02380 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D RGna_10565 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D RGna_11555 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D RGna_10210 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D RGna_06220 AAA family ATPase K02315 dnaC; DNA replication protein DnaC
D RGna_08910 DNA replication protein DnaC K02315 dnaC; DNA replication protein DnaC
D RGna_01345 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D RGna_13470 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RGna_15760 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RGna_07185 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RGna_10235 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RGna_09905 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RGna_00975 PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D RGna_11560 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RGna_00670 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RGna_11735 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RGna_12450 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RGna_13355 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RGna_10500 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RGna_06340 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D RGna_01710 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RGna_02685 NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D RGna_07400 NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D RGna_09560 NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D RGna_04410 DNA topoisomerase 4 subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D RGna_11580 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D RGna_04415 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D RGna_11575 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D RGna_15650 type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D RGna_13930 type IA DNA topoisomerase K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
D RGna_14435 DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
D RGna_04840 DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:rgn03036]
D RGna_00255 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RGna_00380 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RGna_01805 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RGna_02030 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D RGna_03225 flotillin K07192 FLOT; flotillin
D RGna_13490 hypothetical protein K03746 hns; DNA-binding protein H-NS
D RGna_02380 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D RGna_10565 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D RGna_11555 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D RGna_02035 smc; chromosome segregation protein SMC K03529 smc; chromosome segregation protein
D RGna_03850 segregation/condensation protein A K05896 scpA; segregation and condensation protein A
D RGna_03845 scpB; SMC-Scp complex subunit ScpB K06024 scpB; segregation and condensation protein B
D RGna_10545 cell-division initiation protein K13052 divIC; cell division protein DivIC
D RGna_07475 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D RGna_01505 DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D RGna_05085 hypothetical protein K03586 ftsL; cell division protein FtsL
D RGna_05055 cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ
D RGna_05060 cell division protein K03588 ftsW; cell division protein FtsW
D RGna_05110 cell division protein FtsW K03588 ftsW; cell division protein FtsW
D RGna_07470 ABC transporter permease K09811 ftsX; cell division transport system permease protein
D RGna_05050 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D RGna_03650 cell division protein ZapA K09888 zapA; cell division protein ZapA
D RGna_02240 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D RGna_08755 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D RGna_11205 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D RGna_03005 septum formation inhibitor K03610 minC; septum site-determining protein MinC
D RGna_03010 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D RGna_03015 cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D RGna_03050 cell division protein SepF K09772 sepF; cell division inhibitor SepF
D RGna_17500 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D RGna_02985 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D RGna_02990 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D RGna_02995 mreD; rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D RGna_03020 rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D RGna_12895 ParA family protein K03496 parA; chromosome partitioning protein
D RGna_13320 hypothetical protein K03496 parA; chromosome partitioning protein
D RGna_13735 ParA family protein K03496 parA; chromosome partitioning protein
D RGna_14905 ParA family protein K03496 parA; chromosome partitioning protein
D RGna_15735 ParA family protein K03496 parA; chromosome partitioning protein
D RGna_07225 ParA family protein K03496 parA; chromosome partitioning protein
D RGna_11505 ParA family protein K03496 parA; chromosome partitioning protein
D RGna_13325 hypothetical protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RGna_13740 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RGna_15745 DUF3850 domain-containing protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RGna_16955 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RGna_11500 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RGna_11520 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D RGna_11515 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D RGna_03105 integrase K03733 xerC; integrase/recombinase XerC
D RGna_13615 integrase K04763 xerD; integrase/recombinase XerD
D RGna_14605 integrase K04763 xerD; integrase/recombinase XerD
D RGna_03920 hypothetical protein K04763 xerD; integrase/recombinase XerD
D RGna_03925 recombinase XerD K04763 xerD; integrase/recombinase XerD
D RGna_13085 hypothetical protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D RGna_17380 YihA family ribosome biogenesis GTP-binding protein K03978 engB; GTP-binding protein
D RGna_08730 whiA; DNA-binding protein WhiA K09762 whiA; cell division protein WhiA
C 03400 DNA repair and recombination proteins [BR:rgn03400]
D RGna_08815 cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D RGna_14670 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D RGna_08105 sugar fermentation stimulation protein SfsA K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D RGna_12675 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D RGna_10005 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D RGna_01035 helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
D RGna_13575 8-oxo-dGTP diphosphatase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D RGna_01175 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D RGna_03975 8-oxo-dGTP diphosphatase MutT K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D RGna_01275 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D RGna_02740 hypothetical protein K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D RGna_13680 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D RGna_15995 deoxyribonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D RGna_05905 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D RGna_02685 NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D RGna_07400 NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D RGna_09560 NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D RGna_01710 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RGna_17495 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D RGna_17490 excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D RGna_05765 excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D RGna_16540 pcrA; DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RGna_02425 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RGna_02785 AAA family ATPase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RGna_04895 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RGna_08945 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D RGna_08940 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D RGna_08165 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D RGna_02205 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D RGna_05005 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D RGna_02950 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D RGna_10155 endonuclease MutS2 K07456 mutS2; DNA mismatch repair protein MutS2
D RGna_02955 DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D RGna_04140 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D RGna_04135 xseB; exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D RGna_09905 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RGna_00975 PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D RGna_11560 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RGna_00670 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RGna_11735 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RGna_12450 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RGna_13355 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RGna_10500 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RGna_13470 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RGna_15760 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RGna_07185 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RGna_10235 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RGna_17505 ATP-dependent RecD-like DNA helicase K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D RGna_09775 ATP-dependent RecD-like DNA helicase K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D RGna_04785 recA; recombinase RecA K03553 recA; recombination protein RecA
D RGna_03660 Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D RGna_03655 Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D RGna_06310 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D RGna_08690 SMC family ATPase K03546 sbcC; DNA repair protein SbcC/Rad50
D RGna_08695 exonuclease SbcCD subunit D K03547 sbcD; DNA repair protein SbcD/Mre11
D RGna_15425 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D RGna_11570 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D RGna_12165 ATP-binding protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D RGna_03595 DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D RGna_06045 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D RGna_10490 recombination protein RecR K06187 recR; recombination protein RecR
D RGna_04105 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D RGna_03525 Holliday junction resolvase RecU K03700 recU; recombination protein U
D RGna_07525 addA; helicase-exonuclease AddAB subunit AddA K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
D RGna_07530 helicase-exonuclease AddAB subunit AddB K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
D RGna_16760 type I-C CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1
D RGna_04410 DNA topoisomerase 4 subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D RGna_11580 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D RGna_04415 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D RGna_11575 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D RGna_15650 type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D RGna_02380 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D RGna_10565 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D RGna_12330 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D RGna_13490 hypothetical protein K03746 hns; DNA-binding protein H-NS
D RGna_07340 DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D RGna_09550 DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D RGna_02440 DNA methylase K03502 umuC; DNA polymerase V
D RGna_03130 transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D RGna_04780 regulatory protein RecX K03565 recX; regulatory protein
D RGna_08020 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D RGna_08025 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D RGna_04375 bifunctional oligoribonuclease/PAP phosphatase NrnA K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:rgn03029]
D RGna_04385 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D RGna_01300 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D RGna_16055 elongation factor Ts K02357 tsf; elongation factor Ts
D RGna_08835 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D RGna_05415 fusA; elongation factor G K02355 fusA; elongation factor G
D RGna_08840 fusA; elongation factor G K02355 fusA; elongation factor G
D RGna_06055 GTPase Era K03595 era; GTPase
D RGna_10625 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RGna_05370 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RGna_05880 aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RGna_06040 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D RGna_16000 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RGna_13470 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RGna_15760 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RGna_07185 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RGna_10235 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RGna_00770 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D RGna_00765 nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D RGna_15940 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RGna_15935 co-chaperone GroES K04078 groES; chaperonin GroES
D RGna_00775 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D RGna_07820 J domain-containing protein K03686 dnaJ; molecular chaperone DnaJ
D RGna_08655 J domain-containing protein K03686 dnaJ; molecular chaperone DnaJ
D RGna_11330 molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D RGna_15580 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RGna_04750 nifS; cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RGna_11535 stage III sporulation protein J K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RGna_07445 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:rgn02000]
D RGna_01645 ABC transporter ATP-binding protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D RGna_01650 ABC transporter ATP-binding protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D RGna_03125 ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D RGna_15540 ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D RGna_10775 ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D RGna_13640 ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D RGna_03120 ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D RGna_13645 ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D RGna_10770 ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D RGna_15545 ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D RGna_12545 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D RGna_05810 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D RGna_09640 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D RGna_12355 ABC transporter ATP-binding protein K06148 ABCC-BAC; ATP-binding cassette, subfamily C, bacterial
D RGna_06950 ABC-F type ribosomal protection protein K19350 lsa; lincosamide and streptogramin A transport system ATP-binding/permease protein
D RGna_04490 ABC transporter ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein
D RGna_16205 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D RGna_16210 modB; molybdate ABC transporter permease subunit K02018 modB; molybdate transport system permease protein
D RGna_16215 ABC transporter K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D RGna_01375 spermidine/putrescine ABC transporter permease/substrate-binding protein PotCD K11069 potD; spermidine/putrescine transport system substrate-binding protein
D RGna_01380 ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein
D RGna_01385 ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D RGna_14615 glycine/betaine ABC transporter substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D RGna_14560 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein
D RGna_14620 ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D RGna_16235 ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D RGna_05730 ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D RGna_05725 ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D RGna_10700 ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D RGna_11730 sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D RGna_11755 ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D RGna_12590 ABC transporter substrate-binding protein K25086 musE; maltose transport system substrate-binding protein
D RGna_12595 sugar ABC transporter permease K25087 musF; maltose transport system permease protein
D RGna_12600 carbohydrate ABC transporter permease K25088 musG; maltose transport system permease protein
D RGna_06085 maltose ABC transporter substrate-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D RGna_06095 sugar ABC transporter permease K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D RGna_08540 sugar ABC transporter permease K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D RGna_06090 sugar ABC transporter permease K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D RGna_08535 sugar ABC transporter permease K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D RGna_17175 sugar ABC transporter substrate-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D RGna_04350 hypothetical protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D RGna_10310 ABC transporter substrate-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D RGna_17180 sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D RGna_10305 sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D RGna_17190 carbohydrate ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D RGna_10300 carbohydrate ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D RGna_08795 carbohydrate ABC transporter substrate-binding protein K10200 ngcE; N-acetylglucosamine transport system substrate-binding protein
D RGna_08790 sugar ABC transporter permease K10201 ngcF; N-acetylglucosamine transport system permease protein
D RGna_08785 carbohydrate ABC transporter permease K10202 ngcG; N-acetylglucosamine transport system permease protein
D RGna_12615 sugar ABC transporter substrate-binding protein K17318 lplA; putative aldouronate transport system substrate-binding protein
D RGna_08440 ABC transporter substrate-binding protein K17318 lplA; putative aldouronate transport system substrate-binding protein
D RGna_08450 sugar ABC transporter permease K17319 lplB; putative aldouronate transport system permease protein
D RGna_08445 carbohydrate ABC transporter permease K17320 lplC; putative aldouronate transport system permease protein
D RGna_04345 carbohydrate ABC transporter substrate-binding protein K25067 fcsSBP; fucose transport system substrate-binding protein
D RGna_04340 sugar ABC transporter permease K25068 K25068; fucose transport system permease protein
D RGna_04335 carbohydrate ABC transporter permease K25069 K25069; fucose transport system permease protein
D RGna_15130 hypothetical protein K10559 rhaS; rhamnose transport system substrate-binding protein
D RGna_15120 ABC transporter permease K10560 rhaP; rhamnose transport system permease protein
D RGna_15125 hypothetical protein K10561 rhaQ; rhamnose transport system permease protein
D RGna_15115 sugar ABC transporter ATP-binding protein K10562 rhaT; rhamnose transport system ATP-binding protein [EC:7.5.2.-]
D RGna_12285 D-ribose ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D RGna_15235 sugar ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D RGna_15255 LacI family transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein
D RGna_04885 sugar ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D RGna_10195 sugar ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D RGna_10725 LacI family transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein
D RGna_12280 rbsC; ribose ABC transporter permease K10440 rbsC; ribose transport system permease protein
D RGna_15240 ABC transporter permease K10440 rbsC; ribose transport system permease protein
D RGna_15250 ABC transporter permease K10440 rbsC; ribose transport system permease protein
D RGna_12275 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D RGna_15245 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D RGna_06770 ABC transporter substrate-binding protein K25670 fusA; fructooligosaccharide transport system substrate-binding protein
D RGna_06780 sugar ABC transporter permease K25671 fusC; fructooligosaccharide transport system permease protein
D RGna_06775 carbohydrate ABC transporter permease K25672 fusB; fructooligosaccharide transport system permease protein
D RGna_07665 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D RGna_07685 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D RGna_07680 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D RGna_07690 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D RGna_08375 sugar ABC transporter substrate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D RGna_11715 ABC transporter substrate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D RGna_08370 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D RGna_11705 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D RGna_08365 carbohydrate ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D RGna_11710 carbohydrate ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D RGna_15365 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D RGna_15370 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D RGna_15375 pstA; phosphate ABC transporter permease PtsA K02038 pstA; phosphate transport system permease protein
D RGna_15380 pstB; phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D RGna_08125 amino acid ABC transporter substrate-binding protein K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein
D RGna_08120 amino acid ABC transporter permease K17077 artQ; arginine/lysine/histidine transport system permease protein
D RGna_08115 glnQ; amino acid ABC transporter ATP-binding protein K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D RGna_11620 metal ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D RGna_11615 ABC transporter permease K02072 metI; D-methionine transport system permease protein
D RGna_11610 ABC transporter K02071 metN; D-methionine transport system ATP-binding protein
D RGna_10800 ABC transporter substrate-binding protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein
D RGna_10795 ABC transporter permease K05832 K05832; putative tryptophan/tyrosine transport system permease protein
D RGna_10790 ABC transporter ATP-binding protein K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein
D RGna_03995 amino acid ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D RGna_03990 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D RGna_03985 glnQ; amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D RGna_05510 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D RGna_05525 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D RGna_05520 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D RGna_05515 dipeptide ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D RGna_06190 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RGna_06185 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RGna_06165 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RGna_06160 dipeptide ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D RGna_12770 isdE; heme ABC transporter substrate-binding protein IsdE K25113 htsA; heme transport system substrate-binding protein
D RGna_12775 iron ABC transporter permease K25114 htsB; heme transport system permease protein
D RGna_12780 ABC transporter ATP-binding protein K25115 htsC; heme transport system ATP-binding protein [EC:7.6.2.5]
D RGna_12765 hypothetical protein K25119 shp; heme transport system cell surface heme-binding protein
D RGna_00815 ABC transporter substrate-binding protein K25282 yclQ; iron-siderophore transport system substrate-binding protein
D RGna_00805 CRISPR-associated protein Cas5 K25283 yclO; iron-siderophore transport system permease protein
D RGna_00800 iron ABC transporter permease K25284 yclN; iron-siderophore transport system permease protein
D RGna_00810 iron ABC transporter ATP-binding protein K25285 yclP; iron-siderophore transport system ATP-binding protein [EC:7.2.2.-]
D RGna_02925 ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D RGna_02930 iron ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein
D RGna_02935 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D RGna_05850 zinc ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein
D RGna_05840 metal ABC transporter permease K09816 znuB; zinc transport system permease protein
D RGna_05845 metal ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D RGna_05615 cobalt ABC transporter K02009 cbiN; cobalt/nickel transport protein
D RGna_05610 cbiQ; cobalt ECF transporter T component CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein
D RGna_05620 energy-coupling factor ABC transporter permease K02007 cbiM; cobalt/nickel transport system permease protein
D RGna_05605 ABC transporter ATP-binding protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D RGna_09020 biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component
D RGna_03475 ECF transporter S component K16923 qrtT; energy-coupling factor transport system substrate-specific component
D RGna_10860 ECF transporter S component K16923 qrtT; energy-coupling factor transport system substrate-specific component
D RGna_14415 hypothetical protein K16927 cbrT; energy-coupling factor transport system substrate-specific component
D RGna_10665 energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein
D RGna_10855 energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein
D RGna_10675 energy-coupling factor transporter ATPase K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D RGna_10850 ABC transporter ATP-binding protein K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D RGna_10670 energy-coupling factor transporter ATPase K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D RGna_10845 ABC transporter ATP-binding protein K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D RGna_17575 ABC transporter permease K09690 wzm; homopolymeric O-antigen transport system permease protein
D RGna_17580 ABC transporter ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D RGna_13660 ABC transporter permease K09696 natB; sodium transport system permease protein
D RGna_13655 ABC transporter ATP-binding protein K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D RGna_06975 lantibiotic immunity ABC transporter MutE/EpiE family permease subunit K20491 nisE; lantibiotic transport system permease protein
D RGna_06970 lantibiotic immunity ABC transporter MutG family permease subunit K20492 nisG; lantibiotic transport system permease protein
D RGna_06980 lantibiotic ABC transporter ATP-binding protein K20490 nisF; lantibiotic transport system ATP-binding protein
D RGna_08675 ABC transporter K25151 gldF; gliding motility-associated transport system permease protein
D RGna_08680 ABC transporter ATP-binding protein K25152 gldA; gliding motility-associated transport system ATP-binding protein
D RGna_08670 hypothetical protein K25153 gldG; gliding motility-associatede transport system auxiliary component
D RGna_14720 ABC transporter permease K25142 lnrN; linearmycin/streptolysin S transport system permease protein
D RGna_14715 ABC transporter permease K25143 lnrM; linearmycin/streptolysin S transport system permease protein
D RGna_14710 ABC transporter ATP-binding protein K25144 lnrL; linearmycin/streptolysin S transport system ATP-binding protein
D RGna_07000 ABC transporter permease K19084 braE; bacitracin transport system permease protein
D RGna_10035 ABC transporter permease K25147 berB; beta-exotoxin I transport system permease protein
D RGna_10030 ABC transporter ATP-binding protein K25148 berA; beta-exotoxin I transport system ATP-binding protein
D RGna_07470 ABC transporter permease K09811 ftsX; cell division transport system permease protein
D RGna_07475 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D RGna_14460 ABC-2 transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D RGna_16685 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D RGna_17445 ABC-2 transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D RGna_17700 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D RGna_03370 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D RGna_08070 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D RGna_09475 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D RGna_10045 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D RGna_11850 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D RGna_14455 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RGna_15985 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RGna_16595 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RGna_16695 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RGna_17210 hypothetical protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RGna_17440 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RGna_17695 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RGna_03375 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RGna_04215 bacitracin ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RGna_04590 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RGna_04610 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RGna_04825 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RGna_05320 bacitracin ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RGna_08075 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RGna_10050 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RGna_11845 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RGna_14040 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D RGna_14045 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D RGna_14055 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D RGna_14060 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D RGna_14095 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D RGna_14100 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D RGna_14645 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D RGna_17415 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D RGna_01750 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D RGna_01755 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D RGna_06235 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D RGna_07890 DUF1430 domain-containing protein K02004 ABC.CD.P; putative ABC transport system permease protein
D RGna_09380 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D RGna_10760 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D RGna_10785 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D RGna_14050 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D RGna_14090 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D RGna_14640 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D RGna_14675 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D RGna_16785 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D RGna_17410 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D RGna_01760 hypothetical protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D RGna_04240 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D RGna_06240 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D RGna_07895 bacteriocin ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D RGna_09385 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D RGna_10765 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D RGna_01070 potassium transporter K23994 SLC9B1_2; solute carrier family 9B (sodium/hydrogen exchanger), member 1/2
D RGna_06925 MATE family efflux transporter K26939 norM; MATE family, multidrug efflux pump
D RGna_01335 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D RGna_03220 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D RGna_00790 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D RGna_02795 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D RGna_08420 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D RGna_14405 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D RGna_13290 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D RGna_05745 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D RGna_01660 hypothetical protein K26937 dinF; MATE family, multidrug efflux pump
D RGna_04450 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D RGna_03865 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D RGna_05805 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D RGna_08490 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D RGna_08630 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D RGna_13805 multidrug transporter MatE K26937 dinF; MATE family, multidrug efflux pump
D RGna_17025 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D RGna_09865 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D RGna_11700 hypothetical protein K26937 dinF; MATE family, multidrug efflux pump
D RGna_10805 MFS transporter K08168 tetB; MFS transporter, DHA2 family, metal-tetracycline-proton antiporter
D RGna_13550 MFS transporter K06902 UMF1; MFS transporter, UMF1 family
D RGna_01010 ptsP; phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D RGna_12930 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D RGna_13700 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D RGna_15590 PTS sugar transporter K02784 ptsH; phosphocarrier protein HPr
D RGna_17535 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D RGna_01005 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D RGna_02690 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D RGna_04655 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D RGna_09820 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D RGna_04445 PTS glucose transporter subunit IIA K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
D RGna_10640 PTS glucose transporter subunit IIBC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D RGna_14540 PTS sugar transporter subunit IIA K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D RGna_14470 PTS beta-glucoside transporter subunit EIIBCA K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D RGna_15220 PTS sugar transporter K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D RGna_03435 PTS beta-glucoside transporter subunit EIIBCA K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D RGna_07795 PTS beta-glucoside transporter subunit EIIBCA K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D RGna_07965 PTS beta-glucoside transporter subunit EIIBCA K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D RGna_09075 PTS fructose transporter subunit IIA K19506 gfrA; fructoselysine/glucoselysine PTS system EIIA component [EC:2.7.1.-]
D RGna_12905 PTS mannose/fructose/sorbose transporter subunit IIB K19507 gfrB; fructoselysine/glucoselysine PTS system EIIB component [EC:2.7.1.-]
D RGna_09070 PTS mannose/fructose/sorbose transporter subunit IIB K19507 gfrB; fructoselysine/glucoselysine PTS system EIIB component [EC:2.7.1.-]
D RGna_12910 PTS sugar transporter subunit IIC K19508 gfrC; fructoselysine/glucoselysine PTS system EIIC component
D RGna_09065 PTS sugar transporter subunit IIC K19508 gfrC; fructoselysine/glucoselysine PTS system EIIC component
D RGna_12915 PTS mannose transporter subunit IID K19509 gfrD; fructoselysine/glucoselysine PTS system EIID component
D RGna_09060 PTS mannose transporter subunit IID K19509 gfrD; fructoselysine/glucoselysine PTS system EIID component
D RGna_14770 PTS sugar transporter subunit IIA K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-]
D RGna_14780 PTS system mannose/fructose/N-acetylgalactosamine-transporter subunit IIB K02745 agaV; N-acetylgalactosamine PTS system EIIB component [EC:2.7.1.-]
D RGna_14785 PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC K02746 agaW; N-acetylgalactosamine PTS system EIIC component
D RGna_14790 PTS N-acetylgalactosamine transporter subunit IID K02747 agaE; N-acetylgalactosamine PTS system EIID component
D RGna_07635 PTS sugar transporter subunit IIA K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D RGna_07625 PTS lactose transporter subunit IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D RGna_07630 PTS ascorbate transporter subunit IIC K03475 ulaA; ascorbate PTS system EIIC component
D RGna_05640 ammonium transporter K03320 amt; ammonium transporter, Amt family
D RGna_00890 formate/nitrite transporter family protein K02598 nirC; nitrite transporter
D RGna_06325 mechanosensitive ion channel protein K03442 mscS; small conductance mechanosensitive channel
D RGna_16845 mgtE; magnesium transporter K06213 mgtE; magnesium transporter
D RGna_01995 mgtE; magnesium transporter K06213 mgtE; magnesium transporter
D RGna_16115 magnesium and cobalt transporter CorA K03284 corA; magnesium transporter
D RGna_14230 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D RGna_08745 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D RGna_17140 CidA/LrgA family protein K06518 cidA; holin-like protein
D RGna_06905 frlA; amino acid permease K19540 frlA; fructoselysine transporter
D RGna_05380 ZIP family metal transporter K07238 TC.ZIP; zinc transporter, ZIP family
D RGna_00205 EamA-like transporter family protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D RGna_03235 GntP family permease K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D RGna_06710 sodium:proton antiporter K18218 tet35; tetracycline resistance efflux pump
D RGna_06945 sodium:proton antiporter K18218 tet35; tetracycline resistance efflux pump
D RGna_08880 potassium/proton antiporter K11105 cvrA; potassium/hydrogen antiporter
D RGna_07390 cation:proton antiporter K26730 napA; Na+:H+ antiporter
D RGna_12840 potassium transporter KtrB K03498 trkH; trk/ktr system potassium uptake protein
D RGna_05405 TrkH family potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein
D RGna_05995 H(+)-transporting ATPase K03498 trkH; trk/ktr system potassium uptake protein
D RGna_12845 TrkA family potassium uptake protein K03499 trkA; trk/ktr system potassium uptake protein
D RGna_05410 Trk system potassium transporter TrkA K03499 trkA; trk/ktr system potassium uptake protein
D RGna_05990 TrkA family potassium uptake protein K03499 trkA; trk/ktr system potassium uptake protein
D RGna_00155 uracil permease K02824 uraA; uracil permease
D RGna_05435 purine permease K16169 pbuX; xanthine permease
D RGna_02855 NCS2 family permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D RGna_06025 xanthine/uracil/vitamin C permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D RGna_17100 ClC family H(+)/Cl(-) exchange transporter K03281 clcA; chloride channel protein, CIC family
D RGna_06755 chromate transporter K07240 chrA; chromate transporter
D RGna_06760 chromate transporter K07240 chrA; chromate transporter
D RGna_11315 metal ABC transporter K03322 mntH; manganese transport protein
D RGna_15000 TRAP transporter small permease K21394 yiaM; TRAP-type transport system small permease protein
D RGna_15360 Na/Pi cotransporter family protein K03324 yjbB; phosphate:Na+ symporter
D RGna_05940 Na/Pi cotransporter family protein K03324 yjbB; phosphate:Na+ symporter
D RGna_02900 polysaccharide biosynthesis protein K06409 spoVB; stage V sporulation protein B
D RGna_04760 stage V sporulation protein D K06409 spoVB; stage V sporulation protein B
D RGna_08855 AEC family transporter K24180 mleP; malate permease and related proteins
D RGna_14400 ECF transporter S component K23675 fmnP; riboflavin transporter
D RGna_05960 folate family ECF transporter S component K23675 fmnP; riboflavin transporter
D RGna_08935 proton-coupled thiamine transporter YuaJ K16789 thiT; thiamine transporter
D RGna_05060 cell division protein K03588 ftsW; cell division protein FtsW
D RGna_05110 cell division protein FtsW K03588 ftsW; cell division protein FtsW
D RGna_08920 sodium-translocating pyrophosphatase K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1]
D RGna_03815 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D RGna_03810 oxaloacetate decarboxylase subunit alpha K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D RGna_03830 carboxyl transferase K01604 mmdA; methylmalonyl-CoA decarboxylase subunit alpha [EC:7.2.4.3]
D RGna_03820 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D RGna_03825 DUF3887 domain-containing protein K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta
D RGna_14865 cytochrome C biogenesis protein K06196 ccdA; cytochrome c-type biogenesis protein
D RGna_12060 tyrosine protein kinase K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D RGna_12030 polysaccharide export protein K19420 epsA; protein tyrosine kinase modulator
D RGna_16075 nicotinamide riboside transporter PnuC K03811 pnuC; nicotinamide mononucleotide transporter
D RGna_16910 ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A
D RGna_16915 ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A
D RGna_16920 feoB; ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D RGna_11440 feoB; ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
C 02044 Secretion system [BR:rgn02044]
D RGna_11140 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D RGna_16015 pilus assembly protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D RGna_11170 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D RGna_11165 type II secretion system protein F K12510 tadB; tight adherence protein B
D RGna_11160 secretion protein F K12511 tadC; tight adherence protein C
D RGna_00210 hypothetical protein K02237 comEA; competence protein ComEA
D RGna_11190 cytidine deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D RGna_00665 DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC
D RGna_13525 hypothetical protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D RGna_13780 type IV secretory system conjugative DNA transfer family protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D RGna_09370 ATPase K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D RGna_09430 hypothetical protein K12063 traC; conjugal transfer ATP-binding protein TraC
D RGna_17320 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RGna_05915 protein translocase subunit SecDF K12257 secDF; SecD/SecF fusion protein
D RGna_06000 protein translocase subunit SecDF K12257 secDF; SecD/SecF fusion protein
D RGna_08975 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D RGna_14485 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D RGna_08205 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D RGna_06385 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D RGna_02040 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D RGna_01405 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D RGna_11535 stage III sporulation protein J K03217 yidC; YidC/Oxa1 family membrane protein insertase
C 02042 Bacterial toxins [BR:rgn02042]
D RGna_14230 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D RGna_08745 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D RGna_13580 hemolysin K11068 hlyIII; hemolysin III
D RGna_09680 phospholipase K01114 plc; phospholipase C [EC:3.1.4.3]
C 02022 Two-component system [BR:rgn02022]
D RGna_15395 two-component sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D RGna_15390 DNA-binding response regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D RGna_17400 DNA-binding response regulator K07776 regX3; two-component system, OmpR family, response regulator RegX3
D RGna_04495 sensor histidine kinase KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D RGna_04550 sensor histidine kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D RGna_04545 DNA-binding response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D RGna_08930 DNA-binding response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D RGna_14650 DNA-binding response regulator K07775 resD; two-component system, OmpR family, response regulator ResD
D RGna_06810 sensor histidine kinase K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3]
D RGna_06815 DNA-binding response regulator K19082 braR; two-component system, OmpR family, response regulator protein BraR/BceR
D RGna_14655 HAMP domain-containing protein K18345 vanSB; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D RGna_01745 sensor histidine kinase K18345 vanSB; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D RGna_16680 sensor histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D RGna_06960 sensor histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D RGna_16675 DNA-binding response regulator K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
D RGna_06965 DNA-binding response regulator K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
D RGna_17455 DNA-binding response regulator K02483 K02483; two-component system, OmpR family, response regulator
D RGna_01920 DNA-binding response regulator K02483 K02483; two-component system, OmpR family, response regulator
D RGna_04095 spo0A; sporulation transcription factor Spo0A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A
D RGna_08760 hypothetical protein K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A
D RGna_12610 sensor histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D RGna_15230 sensor histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D RGna_04360 sensor histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D RGna_09830 sensor histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D RGna_10315 sensor histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D RGna_12605 DNA-binding response regulator K07720 yesN; two-component system, response regulator YesN
D RGna_14815 AraC family transcriptional regulator K07720 yesN; two-component system, response regulator YesN
D RGna_15225 DNA-binding response regulator K07720 yesN; two-component system, response regulator YesN
D RGna_04355 DNA-binding response regulator K07720 yesN; two-component system, response regulator YesN
D RGna_09825 DNA-binding response regulator K07720 yesN; two-component system, response regulator YesN
D RGna_10320 DNA-binding response regulator K07720 yesN; two-component system, response regulator YesN
D RGna_14745 ANTAR domain-containing protein K22010 pdtaR; two-component system, response regulator PdtaR
C 02035 Bacterial motility proteins [BR:rgn02035]
D RGna_03870 flagellar protein FliB K18475 fliB; lysine-N-methylase [EC:2.1.1.-]
D RGna_11140 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D RGna_16015 pilus assembly protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D RGna_11170 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
C 03037 Cilium and associated proteins [BR:rgn03037]
D RGna_01070 potassium transporter K23994 SLC9B1_2; solute carrier family 9B (sodium/hydrogen exchanger), member 1/2
C 04812 Cytoskeleton proteins [BR:rgn04812]
D RGna_17500 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D RGna_02985 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D RGna_16670 plasmid segregation actin-type ATPase ParM K18640 parM; plasmid segregation protein ParM
D RGna_01790 plasmid segregation actin-type ATPase ParM K18640 parM; plasmid segregation protein ParM
D RGna_09750 plasmid segregation actin-type ATPase ParM K18640 parM; plasmid segregation protein ParM
D RGna_11420 plasmid segregation actin-type ATPase ParM K18640 parM; plasmid segregation protein ParM
D RGna_05050 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D RGna_03005 septum formation inhibitor K03610 minC; septum site-determining protein MinC
D RGna_03010 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D RGna_03015 cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D RGna_12895 ParA family protein K03496 parA; chromosome partitioning protein
D RGna_13320 hypothetical protein K03496 parA; chromosome partitioning protein
D RGna_13735 ParA family protein K03496 parA; chromosome partitioning protein
D RGna_14905 ParA family protein K03496 parA; chromosome partitioning protein
D RGna_15735 ParA family protein K03496 parA; chromosome partitioning protein
D RGna_07225 ParA family protein K03496 parA; chromosome partitioning protein
D RGna_11505 ParA family protein K03496 parA; chromosome partitioning protein
D RGna_13325 hypothetical protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RGna_13740 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RGna_15745 DUF3850 domain-containing protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RGna_16955 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RGna_11500 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:rgn04147]
D RGna_07445 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D RGna_14445 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RGna_04230 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RGna_04730 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RGna_04725 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D RGna_01615 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RGna_00150 membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D RGna_03225 flotillin K07192 FLOT; flotillin
D RGna_15940 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RGna_00770 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D RGna_11075 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RGna_15945 IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D RGna_08835 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D RGna_11115 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D RGna_03720 hypothetical protein K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D RGna_09990 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D RGna_08200 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D RGna_05715 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D RGna_00160 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D RGna_09105 aminotransferase class V-fold PLP-dependent enzyme K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105]
D RGna_11000 hydA; dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D RGna_04325 alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
D RGna_00845 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D RGna_12065 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D RGna_13275 glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30]
D RGna_06105 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D RGna_14740 type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RGna_08705 glutamine synthetase type III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RGna_01430 3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D RGna_14240 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D RGna_15205 aldo/keto reductase K00002 AKR1A1; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D RGna_04720 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 02048 Prokaryotic defense system [BR:rgn02048]
D RGna_16760 type I-C CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1
D RGna_16765 cas2; CRISPR-associated endonuclease Cas2 K09951 cas2; CRISPR-associated protein Cas2
D RGna_16725 CRISPR-associated helicase/endonuclease Cas3 K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D RGna_16755 cas4; CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D RGna_16745 cas8c; type I-C CRISPR-associated protein Cas8c/Csd1 K19117 csd1; CRISPR-associated protein Csd1
D RGna_16750 cas7c; type I-C CRISPR-associated protein Cas7/Csd2 K19118 csd2; CRISPR-associated protein Csd2
D RGna_16740 cas5c; type I-C CRISPR-associated protein Cas5 K19119 cas5d; CRISPR-associated protein Cas5d
D RGna_00255 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RGna_00380 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RGna_01805 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RGna_00365 HNH endonuclease K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]
D RGna_00265 hypothetical protein K07452 mcrB; 5-methylcytosine-specific restriction enzyme B [EC:3.1.21.-]
D RGna_00235 type I addiction module toxin, SymE family K19048 symE; toxic protein SymE
D RGna_00590 hypothetical protein K19048 symE; toxic protein SymE
D RGna_00355 type II toxin-antitoxin system PemK/MazF family toxin K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D RGna_01480 type II toxin-antitoxin system PemK/MazF family toxin K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D RGna_01840 type II toxin-antitoxin system PemK/MazF family toxin K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D RGna_02640 type II toxin-antitoxin system PemK/MazF family toxin K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D RGna_07195 type II toxin-antitoxin system PemK/MazF family toxin K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D RGna_13045 type II toxin-antitoxin system antitoxin, RelB/DinJ family K07473 dinJ; DNA-damage-inducible protein J
D RGna_10100 type II toxin-antitoxin system antitoxin, RelB/DinJ family K07473 dinJ; DNA-damage-inducible protein J
D RGna_04265 type II toxin-antitoxin system HicA family toxin K07339 hicA; mRNA interferase HicA [EC:3.1.-.-]
D RGna_04260 HicB family protein K18843 hicB; antitoxin HicB
D RGna_08825 type II toxin-antitoxin system RelE/ParE family toxin K19092 parE1_3_4; toxin ParE1/3/4
D RGna_10105 type II toxin-antitoxin system RelE/ParE family toxin K19092 parE1_3_4; toxin ParE1/3/4
D RGna_04560 YhcH/YjgK/YiaL family protein K19334 tabA; biofilm protein TabA
D RGna_05050 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D RGna_17500 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D RGna_02985 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D RGna_15580 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RGna_04750 nifS; cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:rgn01504]
D RGna_10805 MFS transporter K08168 tetB; MFS transporter, DHA2 family, metal-tetracycline-proton antiporter
D RGna_06710 sodium:proton antiporter K18218 tet35; tetracycline resistance efflux pump
D RGna_06945 sodium:proton antiporter K18218 tet35; tetracycline resistance efflux pump
D RGna_17000 TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein K18220 tetM; ribosomal protection tetracycline resistance protein
D RGna_08110 GTP-binding protein K18220 tetM; ribosomal protection tetracycline resistance protein
D RGna_06950 ABC-F type ribosomal protection protein K19350 lsa; lincosamide and streptogramin A transport system ATP-binding/permease protein
D RGna_02080 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D RGna_14655 HAMP domain-containing protein K18345 vanSB; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D RGna_01745 sensor histidine kinase K18345 vanSB; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D RGna_12640 D-Ala-D-Ala carboxypeptidase VanY K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:rgn00537]
D RGna_00150 membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:rgn03100]
D RGna_10435 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RGna_11645 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RGna_13105 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RGna_15975 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RGna_11480 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RGna_08015 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RGna_10430 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D RGna_14320 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D RGna_16370 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D RGna_11655 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D RGna_14345 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D RGna_13540 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D RGna_13115 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D RGna_07945 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D RGna_13710 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D RGna_13535 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D RGna_14330 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D RGna_08715 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D RGna_05875 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RGna_12475 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RGna_13100 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RGna_13110 tRNA-His K14226 tRNA-His; tRNA His
D RGna_11640 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D RGna_14325 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D RGna_13125 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RGna_14355 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RGna_08635 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RGna_01315 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RGna_01325 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RGna_11685 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D RGna_13120 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D RGna_13235 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D RGna_01065 tRNA-Met K14230 tRNA-Met; tRNA Met
D RGna_01085 tRNA-Met K14230 tRNA-Met; tRNA Met
D RGna_11675 tRNA-Met K14230 tRNA-Met; tRNA Met
D RGna_14340 tRNA-Met K14230 tRNA-Met; tRNA Met
D RGna_11680 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D RGna_07940 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D RGna_05125 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D RGna_13095 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D RGna_14295 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RGna_11625 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RGna_14300 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RGna_05750 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RGna_11670 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RGna_14335 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RGna_01130 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RGna_15450 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D RGna_11665 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D RGna_01060 tRNA-Val K14237 tRNA-Val; tRNA Val
D RGna_01080 tRNA-Val K14237 tRNA-Val; tRNA Val
D RGna_11660 tRNA-Val K14237 tRNA-Val; tRNA Val
D RGna_14350 tRNA-Val K14237 tRNA-Val; tRNA Val
D RGna_11630 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RGna_11310 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RGna_11300 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RGna_12665 ffs; signal recognition particle sRNA large type K01983 ffs; SRP RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D RGna_14940 gluconate 5-dehydrogenase K00046 idnO; gluconate 5-dehydrogenase [EC:1.1.1.69]
D RGna_07550 aldo/keto reductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D RGna_10820 NADH-dependent alcohol dehydrogenase K19955 adh2; alcohol dehydrogenase [EC:1.1.1.-]
D RGna_15475 (2Fe-2S)-binding protein K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3]
D RGna_09095 dihydrodipicolinate reductase K25950 amdH; secondary-alkyl amine dehydrogenase [NAD(P)+] [EC:1.4.1.28]
D RGna_17470 pyridine nucleotide-disulfide oxidoreductase K22405 fprA1_2; NADH oxidase (H2O-forming) [EC:1.6.3.4]
D RGna_09860 thioredoxin-dependent thiol peroxidase K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D RGna_01530 sulfide/dihydroorotate dehydrogenase-like FAD/NAD-binding protein K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D RGna_10175 arsenate reductase ArsC K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D RGna_01270 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D RGna_02725 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D RGna_12585 anaerobic ribonucleoside-triphosphate reductase activating protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D RGna_15030 glycyl-radical enzyme activating protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D RGna_15520 pflA; pyruvate formate lyase-activating protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D RGna_07985 class I SAM-dependent RNA methyltransferase K07444 ypsC; putative N6-adenine-specific DNA methylase [EC:2.1.1.-]
D RGna_01705 GNAT family N-acetyltransferase K03826 yiaC; putative acetyltransferase [EC:2.3.1.-]
D RGna_01665 GNAT family N-acetyltransferase K03830 yafP; putative acetyltransferase [EC:2.3.1.-]
D RGna_06805 gnpA; 1,3-beta-galactosyl-N-acetylhexosamine phosphorylase K15533 K15533; 1,3-beta-galactosyl-N-acetylhexosamine phosphorylase [EC:2.4.1.211]
D RGna_06200 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D RGna_03680 FAD:protein FMN transferase K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D RGna_06845 fructoselysine 6-kinase K10710 frlD; fructoselysine 6-kinase [EC:2.7.1.218]
D RGna_03600 DAK2 domain-containing protein K07030 fakA; fatty acid kinase [EC:2.7.2.18]
D RGna_01340 pap; polyphosphate:AMP phosphotransferase K23753 ppk2; AMP-polyphosphate phosphotransferase [EC:2.7.4.33]
D RGna_00330 DNA polymerase I K02334 dpo; DNA polymerase bacteriophage-type [EC:2.7.7.7]
D RGna_13815 ltrA; group II intron reverse transcriptase/maturase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D RGna_07035 hypothetical protein K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D RGna_17525 TIGR00159 family protein K18672 dacA; diadenylate cyclase [EC:2.7.7.85]
D RGna_17545 LTA synthase family protein K01002 mdoB; phosphoglycerol transferase [EC:2.7.8.20]
D RGna_15315 anti-sigma F factor K06379 spoIIAB; stage II sporulation protein AB (anti-sigma F factor) [EC:2.7.11.1]
D RGna_05760 HPr(Ser) kinase/phosphatase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-]
D RGna_10540 serine/threonine protein phosphatase K06382 spoIIE; stage II sporulation protein E [EC:3.1.3.16]
D RGna_12055 capsular biosynthesis protein K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D RGna_15960 YqeG family HAD IIIA-type phosphatase K07015 yqeG; putative phosphatase [EC:3.1.3.-]
D RGna_10220 DHH family phosphoesterase K22927 gdpP; cyclic-di-AMP phosphodiesterase [EC:3.1.4.59]
D RGna_11025 TatD family deoxyribonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D RGna_08505 alpha-glucosidase K01215 dexB; glucan 1,6-alpha-glucosidase [EC:3.2.1.70]
D RGna_14970 glycoside hydrolase 105 family protein K15532 yteR; unsaturated rhamnogalacturonyl hydrolase [EC:3.2.1.172]
D RGna_08430 glycoside hydrolase 105 family protein K15532 yteR; unsaturated rhamnogalacturonyl hydrolase [EC:3.2.1.172]
D RGna_14775 glucuronyl hydrolase K18581 ugl; unsaturated chondroitin disaccharide hydrolase [EC:3.2.1.180]
D RGna_09050 DUF2961 domain-containing protein K27494 exoMA1; D-arabinan exo alpha-(1,3)/(1,5)-arabinofuranosidase (non-reducing end) [EC:3.2.1.225]
D RGna_15905 N-acetylmuramoyl-L-alanine amidase K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D RGna_15950 N-acetylmuramoyl-L-alanine amidase K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D RGna_16490 hypothetical protein K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D RGna_06305 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D RGna_08065 formylmethionine deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D RGna_00855 peptidoglycan N-acetylglucosamine deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D RGna_17070 delta-lactam-biosynthetic de-N-acetylase K01567 pdaA; peptidoglycan-N-acetylmuramic acid deacetylase [EC:3.5.1.-]
D RGna_16155 RidA family protein K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D RGna_04985 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D RGna_09330 type 2 lantipeptide synthetase LanM K27862 lanM; class II lanthipeptide synthase [EC:3.13.2.4]
D RGna_03460 oleate hydratase K10254 ohyA; oleate hydratase [EC:4.2.1.53]
D RGna_01470 NAD(P)H-hydrate dehydratase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D RGna_08435 hypothetical protein K18198 yesX; rhamnogalacturonan exolyase [EC:4.2.2.24]
D RGna_16170 dpaL; diaminopropionate ammonia-lyase K01751 E4.3.1.15; diaminopropionate ammonia-lyase [EC:4.3.1.15]
D RGna_15280 fucose isomerase K02431 fucU; L-fucose mutarotase [EC:5.1.3.29]
D RGna_15140 rhaM; L-rhamnose mutarotase K03534 rhaM; L-rhamnose mutarotase [EC:5.1.3.32]
D RGna_06855 hypothetical protein K10709 frlC; fructoselysine 3-epimerase [EC:5.1.3.41]
D RGna_06930 xylose isomerase K10709 frlC; fructoselysine 3-epimerase [EC:5.1.3.41]
D RGna_06935 fructoselysine 3-epimerase K10709 frlC; fructoselysine 3-epimerase [EC:5.1.3.41]
D RGna_10970 activase K23876 hgdC; (R)-2-hydroxyacyl-CoA dehydratese activating ATPase [EC:5.6.1.9]
D RGna_08575 acetyl-CoA carboxylase carboxyl transferase subunit K04104 accD3; acyl-CoA carboxylase subunit beta [EC:6.4.1.-]
D RGna_03770 Na+-transporting NADH:ubiquinone oxidoreductase subunit D K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2]
D RGna_03775 electron transport complex subunit RsxC K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2]
D RGna_03750 4Fe-4S dicluster domain-containing protein K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D RGna_05445 heavy metal translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D RGna_04030 cation-translocating P-type ATPase K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D RGna_14840 cadA; heavy metal translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
D RGna_14850 cadA; heavy metal translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
D RGna_11375 cadA; heavy metal translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
D RGna_04705 mgtA; magnesium-translocating P-type ATPase K01531 mgtA; P-type Mg2+ transporter [EC:7.2.2.14]
D RGna_04715 mgtA; magnesium-translocating P-type ATPase K01531 mgtA; P-type Mg2+ transporter [EC:7.2.2.14]
D RGna_09480 mgtA; magnesium-translocating P-type ATPase K01531 mgtA; P-type Mg2+ transporter [EC:7.2.2.14]
D RGna_04015 cation-translocating P-type ATPase K12952 ctpE; cation-transporting P-type ATPase E [EC:7.2.2.-]
C 99981 Carbohydrate metabolism
D RGna_08725 HPr family phosphocarrier protein K11184 chr; catabolite repression HPr-like protein
D RGna_06880 SIS domain-containing protein K19504 gfrE; glucoselysine-6-phosphate deglycase
D RGna_06840 SIS domain-containing protein K19510 gfrF; fructoselysine-6-phosphate deglycase
D RGna_06680 diol dehydratase reactivase subunit alpha K27264 pduG; propanediol dehydratase-reactivating factor large subunit
D RGna_06675 glycerol dehydratase K27265 pduH; propanediol dehydratase-reactivating factor small subunit
C 99982 Energy metabolism
D RGna_03765 FMN-binding domain-containing protein K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G
D RGna_03760 electron transport complex subunit RsxE K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E
D RGna_03755 electron transport complex protein RnfA K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A
D RGna_04745 nifU; Fe-S cluster assembly scaffold protein NifU K04488 iscU; nitrogen fixation protein NifU and related proteins
D RGna_01930 4Fe-4S binding protein K02574 napH; ferredoxin-type protein NapH
C 99983 Lipid metabolism
D RGna_01735 DegV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit
C 99984 Nucleotide metabolism
D RGna_03080 hypothetical protein K15051 endA; DNA-entry nuclease
C 99985 Amino acid metabolism
D RGna_04010 ethanolamine utilization protein EutP K04029 eutP; ethanolamine utilization protein EutP
D RGna_04000 BMC domain-containing protein K04031 eutS; ethanolamine utilization protein EutS
D RGna_04005 BMC domain-containing protein K04031 eutS; ethanolamine utilization protein EutS
D RGna_03045 YggS family pyridoxal phosphate-dependent enzyme K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D RGna_04290 TIGR00374 family protein K07027 K07027; glycosyltransferase 2 family protein
D RGna_14430 cell wall hydrolase K01449 cwlJ; cell wall hydrolase
C 99987 Cofactor metabolism
D RGna_04995 AarF/ABC1/UbiB kinase family protein K03688 ubiB; ubiquinone biosynthesis protein
D RGna_15085 NADH-quinone oxidoreductase subunit J K27271 pduS; cobalamin reductase
C 99988 Secondary metabolism
C 99999 Others
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D RGna_00985 cold shock domain-containing protein K03704 cspA; cold shock protein
D RGna_16275 phage antirepressor Ant K07741 antB; anti-repressor protein
D RGna_14380 RNA-binding transcriptional accessory protein K06959 tex; protein Tex
C 99974 Translation
D RGna_05035 MBL fold metallo-hydrolase K07576 K07576; metallo-beta-lactamase family protein
C 99975 Protein processing
D RGna_17360 trigger factor K03545 tig; trigger factor
D RGna_09875 tig; trigger factor K03545 tig; trigger factor
D RGna_14495 SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein
D RGna_12680 hydrogenase expression/formation protein HypE K04655 hypE; hydrogenase expression/formation protein HypE
D RGna_15640 ATP-binding protein K07391 comM; magnesium chelatase family protein
D RGna_16195 molybdenum hydroxylase K07402 xdhC; xanthine dehydrogenase accessory factor
D RGna_16870 xanthine dehydrogenase K07402 xdhC; xanthine dehydrogenase accessory factor
D RGna_11245 adaptor protein MecA K16511 mecA1_2; adapter protein MecA 1/2
C 99976 Replication and repair
D RGna_03075 RNase H K06993 K06993; ribonuclease H-related protein
D RGna_02980 JAB domain-containing protein K03630 radC; DNA repair protein RadC
D RGna_06335 YraN family protein K07460 yraN; putative endonuclease
D RGna_11270 GIY-YIG nuclease family protein K07461 K07461; putative endonuclease
D RGna_15645 dprA; DNA-protecting protein DprA K04096 smf; DNA processing protein
D RGna_03290 XRE family transcriptional regulator K07467 nicK; putative DNA relaxase
D RGna_05170 XRE family transcriptional regulator K07467 nicK; putative DNA relaxase
D RGna_10940 replication initiation factor domain-containing protein K07467 nicK; putative DNA relaxase
D RGna_00865 replication-associated recombination protein A K07478 ycaJ; putative ATPase
D RGna_00335 hypothetical protein K06919 K06919; putative DNA primase/helicase
D RGna_11425 DNA primase K06919 K06919; putative DNA primase/helicase
D RGna_13530 IS30 family transposase K07482 K07482; transposase, IS30 family
D RGna_15920 IS30 family transposase K07482 K07482; transposase, IS30 family
D RGna_15655 helix-turn-helix domain-containing protein K07483 K07483; transposase
D RGna_00480 transposase K07483 K07483; transposase
D RGna_09340 transposase K07483 K07483; transposase
D RGna_03930 IS66 family insertion sequence hypothetical protein K07484 K07484; transposase
D RGna_02585 transposase K07496 K07496; putative transposase
D RGna_16800 IS481 family transposase K07497 K07497; putative transposase
D RGna_00475 IS3 family transposase K07497 K07497; putative transposase
D RGna_06595 IS3 family transposase K07497 K07497; putative transposase
D RGna_09335 IS3 family transposase K07497 K07497; putative transposase
D RGna_14130 site-specific integrase K14059 int; integrase
D RGna_14595 site-specific integrase K14059 int; integrase
D RGna_06210 site-specific integrase K14059 int; integrase
D RGna_07845 site-specific integrase K14059 int; integrase
C 99979 Viral proteins
C 99998 Others
D RGna_10495 nucleoid-associated protein, YbaB/EbfC family K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D RGna_12090 MFS transporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family
D RGna_14825 MFS transporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family
D RGna_07960 hypothetical protein K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family
D RGna_11065 MFS transporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family
D RGna_11225 MFS transporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family
D RGna_05985 inorganic phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family
D RGna_01180 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D RGna_01295 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D RGna_05735 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D RGna_05375 alanine:cation symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D RGna_07810 alanine:cation symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D RGna_01545 brnQ; branched-chain amino acid transport system II carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
C 99978 Cell growth
D RGna_10985 cobyrinic acid a,c-diamide synthase K07321 cooC; CO dehydrogenase maturation factor
D RGna_05240 spore coat protein CotJB K06333 cotJB; spore coat protein JB
D RGna_11530 protein jag K06346 jag; spoIIIJ-associated protein
D RGna_11770 nucleoside recognition protein K06373 spmA; spore maturation protein A
D RGna_11760 spore maturation protein K06374 spmB; spore maturation protein B
D RGna_15310 STAS domain-containing protein K06378 spoIIAA; stage II sporulation protein AA (anti-sigma F factor antagonist)
D RGna_04420 stage II sporulation protein P K06385 spoIIP; stage II sporulation protein P
D RGna_09930 hypothetical protein K06387 spoIIR; stage II sporulation protein R
D RGna_04195 spoIIIAA; stage III sporulation protein AA K06390 spoIIIAA; stage III sporulation protein AA
D RGna_04190 stage III sporulation protein AB K06391 spoIIIAB; stage III sporulation protein AB
D RGna_04185 spoIIIAC; stage III sporulation protein AC K06392 spoIIIAC; stage III sporulation protein AC
D RGna_04180 stage III sporulation protein AD K06393 spoIIIAD; stage III sporulation protein AD
D RGna_04175 stage III sporulation protein AF K06394 spoIIIAE; stage III sporulation protein AE
D RGna_04170 hypothetical protein K06395 spoIIIAF; stage III sporulation protein AF
D RGna_04165 stage III sporulation protein AG K06396 spoIIIAG; stage III sporulation protein AG
D RGna_04160 SpoIIIAH-like family protein K06397 spoIIIAH; stage III sporulation protein AH
D RGna_02115 spoIVA; stage IV sporulation protein A K06398 spoIVA; stage IV sporulation protein A
D RGna_13875 DUF4368 domain-containing protein K06400 spoIVCA; site-specific DNA recombinase
D RGna_16240 hypothetical protein K06400 spoIVCA; site-specific DNA recombinase
D RGna_16715 recombinase family protein K06400 spoIVCA; site-specific DNA recombinase
D RGna_16940 DUF4368 domain-containing protein K06400 spoIVCA; site-specific DNA recombinase
D RGna_00570 DUF4368 domain-containing protein K06400 spoIVCA; site-specific DNA recombinase
D RGna_00605 recombinase family protein K06400 spoIVCA; site-specific DNA recombinase
D RGna_00610 recombinase family protein K06400 spoIVCA; site-specific DNA recombinase
D RGna_00635 recombinase family protein K06400 spoIVCA; site-specific DNA recombinase
D RGna_05230 recombinase family protein K06400 spoIVCA; site-specific DNA recombinase
D RGna_06415 recombinase K06400 spoIVCA; site-specific DNA recombinase
D RGna_06420 DUF4368 domain-containing protein K06400 spoIVCA; site-specific DNA recombinase
D RGna_06425 recombinase K06400 spoIVCA; site-specific DNA recombinase
D RGna_07320 site-specific recombinase K06400 spoIVCA; site-specific DNA recombinase
D RGna_15325 stage V sporulation protein AA K06403 spoVAA; stage V sporulation protein AA
D RGna_15330 stage V sporulation protein AB K06404 spoVAB; stage V sporulation protein AB
D RGna_15345 SpoVA/SpoVAEb family sporulation membrane protein K06405 spoVAC; stage V sporulation protein AC
D RGna_15350 stage V sporulation protein AD K06406 spoVAD; stage V sporulation protein AD
D RGna_15355 SpoVA/SpoVAEb family sporulation membrane protein K06407 spoVAE; stage V sporulation protein AE
D RGna_01285 spore germination protein K06408 spoVAF; stage V sporulation protein AF
D RGna_06745 hypothetical protein K06410 spoVFA; dipicolinate synthase subunit A
D RGna_06740 dipicolinate synthase subunit B K06411 spoVFB; dipicolinate synthase subunit B
D RGna_08885 septation protein SpoVG K06412 spoVG; stage V sporulation protein G
D RGna_03590 small acid-soluble spore protein K06421 sspD; small acid-soluble spore protein D (minor alpha/beta-type SASP)
D RGna_02885 stage IV sporulation protein K06438 yqfD; similar to stage IV sporulation protein
D RGna_00225 sporulation protein K06298 gerM; germination protein M
C 99993 Cell motility
C 99995 Signaling proteins
D RGna_17280 typA; translational GTPase TypA K06207 typA; GTP-binding protein
D RGna_01725 ACT domain-containing protein K07166 K07166; ACT domain-containing protein
D RGna_02890 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D RGna_16095 PhoH family protein K07175 phoH2; PhoH-like ATPase
D RGna_02405 hypothetical protein K07175 phoH2; PhoH-like ATPase
C 99992 Structural proteins
D RGna_00600 1,4-beta-N-acetylmuramidase K07273 acm; lysozyme
D RGna_10925 LysM peptidoglycan-binding domain-containing protein K07273 acm; lysozyme
D RGna_14890 microcompartment protein PduB K27263 pduB; bacterial microcompartment shell protein
D RGna_15090 BMC domain-containing protein K27272 pduT; bacterial microcompartment shell protein
C 99994 Others
D RGna_15385 phoU; phosphate transport system regulatory protein PhoU K02039 phoU; phosphate transport system protein
D RGna_10635 copper homeostasis protein CutC K06201 cutC; copper homeostasis protein
D RGna_07365 hemerythrin K07216 hr; hemerythrin
D RGna_01695 DUF1648 domain-containing protein K26996 sdpI; immunity protein, SdpI family
B
B 09194 Poorly characterized
C 99996 General function prediction only
D RGna_07575 GNAT family N-acetyltransferase K02348 elaA; ElaA protein
D RGna_15020 phosphatase K04477 ycdX; putative hydrolase
D RGna_16520 phosphatase K04477 ycdX; putative hydrolase
D RGna_07600 HAD family hydrolase K07025 K07025; putative hydrolase of the HAD superfamily
D RGna_05670 YihY/virulence factor BrkB family protein K07058 K07058; membrane protein
D RGna_05795 YhgE/Pip domain-containing protein K01421 yhgE; putative membrane protein
D RGna_05800 YhgE/Pip domain-containing protein K01421 yhgE; putative membrane protein
D RGna_00955 DUF368 domain-containing protein K08974 K08974; putative membrane protein
D RGna_05975 DUF368 domain-containing protein K08974 K08974; putative membrane protein
D RGna_06130 hypothetical protein K08981 K08981; putative membrane protein
C 99997 Function unknown
D RGna_05920 scfB; thioether cross-link-forming SCIFF peptide maturase K06871 K06871; uncharacterized protein
D RGna_09400 radical SAM/SPASM domain-containing protein K06871 K06871; uncharacterized protein
D RGna_09650 radical SAM/SPASM domain-containing protein K06871 K06871; uncharacterized protein
D RGna_09660 radical SAM protein K06871 K06871; uncharacterized protein
D RGna_09675 radical SAM/SPASM domain-containing protein K06871 K06871; uncharacterized protein
D RGna_09700 radical SAM protein K06871 K06871; uncharacterized protein
D RGna_11230 alpha/beta hydrolase K06889 K06889; uncharacterized protein
D RGna_07070 hypothetical protein K06905 D; Bacteriophage probable baseplate hub protein
D RGna_07095 phage tail sheath family protein K06907 FI; Bacteriophage tail sheath protein
D RGna_07090 phage tail protein K06908 FII; Bacteriophage tail tube protein
D RGna_02180 DUF815 domain-containing protein K06923 K06923; uncharacterized protein
D RGna_12070 abortive infection protein K06926 K06926; uncharacterized protein
D RGna_11835 ATP-binding protein K06926 K06926; uncharacterized protein
D RGna_12325 YkgJ family cysteine cluster protein K06940 K06940; uncharacterized protein
D RGna_09590 YkgJ family cysteine cluster protein K06940 K06940; uncharacterized protein
D RGna_10455 hypothetical protein K06950 K06950; uncharacterized protein
D RGna_06375 KH domain-containing protein K06960 K06960; uncharacterized protein
D RGna_06835 SgcQ protein K06971 K06971; uncharacterized protein
D RGna_06295 peptidase K06973 K06973; uncharacterized protein
D RGna_01555 pyridoxamine 5'-phosphate oxidase family protein K07005 K07005; uncharacterized protein
D RGna_11060 amidohydrolase K07045 K07045; uncharacterized protein
D RGna_10180 permease K07089 K07089; uncharacterized protein
D RGna_07975 metallophosphoesterase K07095 K07095; uncharacterized protein
D RGna_11820 phosphodiesterase K07095 K07095; uncharacterized protein
D RGna_03855 metallophosphoesterase K07098 K07098; uncharacterized protein
D RGna_11870 transcription repressor NadR K07105 K07105; uncharacterized protein
D RGna_03540 KR domain-containing protein K07124 K07124; uncharacterized protein
D RGna_13245 ATP-binding protein K07133 K07133; uncharacterized protein
D RGna_09585 ATP-binding protein K07133 K07133; uncharacterized protein
D RGna_12360 FAD-dependent oxidoreductase K07137 K07137; uncharacterized protein
D RGna_02975 FAD-dependent oxidoreductase K07137 K07137; uncharacterized protein
D RGna_00875 TIGR01212 family radical SAM protein K07139 K07139; uncharacterized protein
D RGna_04870 hypothetical protein K07149 K07149; uncharacterized protein
D RGna_11540 membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein
D RGna_05945 GatB/YqeY domain-containing protein K09117 K09117; uncharacterized protein
D RGna_03725 DUF438 domain-containing protein K09155 K09155; uncharacterized protein
D RGna_01730 PFL family protein K09157 K09157; uncharacterized protein
D RGna_16105 HD domain-containing protein K09163 K09163; uncharacterized protein
D RGna_06135 hypothetical protein K09167 K09167; uncharacterized protein
D RGna_03970 DUF2075 domain-containing protein K09384 K09384; uncharacterized protein
D RGna_03035 DUF378 domain-containing protein K09779 K09779; uncharacterized protein
D RGna_06390 DNA-binding protein K09787 K09787; uncharacterized protein
D RGna_12340 DUF454 domain-containing protein K09790 K09790; uncharacterized protein
D RGna_09915 RNA-binding protein K00243 K00243; uncharacterized protein
D RGna_12140 peroxide stress protein YaaA K09861 K09861; uncharacterized protein
D RGna_13445 hypothetical protein K09925 K09925; uncharacterized protein
D RGna_00940 DUF2156 domain-containing protein K01163 K01163; uncharacterized protein
D RGna_03165 ribosomal-processing cysteine protease Prp K07584 ysxB; uncharacterized protein
D RGna_05190 ribosomal-processing cysteine protease Prp K07584 ysxB; uncharacterized protein
D RGna_05980 DUF47 domain-containing protein K07220 K07220; uncharacterized protein
D RGna_04395 DUF448 domain-containing protein K07742 ylxR; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: September 22, 2024