+D Messenger RNA Biogenesis KO #

  Prokaryotic Defense System - Rhodoferax sediminis Gr-4

% ! ACRISPR-Cas system B Universal Cas proteins B Type I CRISPR-Cas system C Type I signiture cas proteins C Subtype I-A factors C Subtype I-B factors C Subtype I-C factors C Subtype I-D factors C Subtype I-E factors C Subtype I-F factors C Subtype I-U factors B Type II CRISPR-Cas system C Type II signiture cas proteins C Subtype II-A factors C Subtype II-B factors B Type III CRISPR-Cas system C Type III signiture cas proteins C Subtype III-A factors C Subtype III-B factors C Subtype III-U factors # ARestriction and modification system (R-M system) B Type I R-M system C EXZ61_12925 type I restriction endonuclease subunit R K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] C EXZ61_21025 type I restriction endonuclease subunit R K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] C EXZ61_05470 type I restriction endonuclease subunit R K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] C EXZ61_12935 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] C EXZ61_21015 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] C EXZ61_05455 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] C EXZ61_12940 SAM-dependent methyltransferase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] C EXZ61_21010 SAM-dependent DNA methyltransferase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] C EXZ61_05450 SAM-dependent DNA methyltransferase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] B Type II R-M system C Restriction endonucleases C DNA methyltransferases D EXZ61_18175 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D EXZ61_02625 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D EXZ61_20860 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D EXZ61_06920 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] B Type III R-M system C EXZ61_00590 DEAD/DEAH box helicase K01156 res; type III restriction enzyme [EC:3.1.21.5] C EXZ61_00580 site-specific DNA-methyltransferase K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72] B Type IV R-M system C EXZ61_05460 restriction endonuclease K07452 mcrB; 5-methylcytosine-specific restriction enzyme B [EC:3.1.21.-] C EXZ61_05465 restriction endonuclease K19147 mcrC; 5-methylcytosine-specific restriction enzyme subunit McrC C EXZ61_13230 restriction endonuclease K07448 mrr; restriction system protein C EXZ61_05445 restriction endonuclease K07448 mrr; restriction system protein # AToxin-antitoxin system (TA system) B Type I TA system C Hok-Sok C SymE-SymR C Ldr-Rdl C TisB-IstR C Ibs-Sib C ShoB-OhsC C RalR-RalA B Type II TA system C MazF-MazE C ChpB-ChpS C YhaV-PrlF C RelE/StbE-RelB/StbD C YafQ-dinJ C YoeB-YefM C HipA-HipB D EXZ61_11750 type II toxin-antitoxin system HipA family toxin K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D EXZ61_21440 type II toxin-antitoxin system HipA family toxin K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D EXZ61_11745 transcriptional regulator K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB C HicA-HicB C YafO-YafN C Hha-TomB C PspC-PspB C CcdB-CcdA D EXZ61_08020 plasmid maintenance protein CcdB K19163 ccdB; toxin CcdB D EXZ61_08015 hypothetical protein K19164 ccdA; antitoxin CcdA C ParE-ParD D EXZ61_10510 type II toxin-antitoxin system RelE/ParE family toxin K19092 parE1_3_4; toxin ParE1/3/4 D EXZ61_10505 type II toxin-antitoxin system ParD family antitoxin K07746 parD1_3_4; antitoxin ParD1/3/4 C Doc-Phd C HigB-HigA C MqsR-MqsA C VapC-VapB C PezT-PezA C YobL-YobK C YokI-YokJ C YqcG-YqcF C YxiD-YxxD C FitB-FitA C BC_0920-BC_0921 C Type II TA system related factors D EXZ61_04680 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D EXZ61_20715 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D EXZ61_06915 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D EXZ61_06905 type IIA DNA topoisomerase subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D EXZ61_06675 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] B Type III TA system C AbiQ system B Type IV TA system C YeeV-YeeU C CptA-CptB D EXZ61_15110 succinate dehydrogenase assembly factor 2 K09159 cptB; antitoxin CptB B Type V TA system C GhoT-GhoS # ADNA phosphothiolation system B Sulfur modification proteins C EXZ61_08275 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C EXZ61_06755 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7] B DNA phosphorothioation-dependent restriction proteins ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: November 7, 2023