+D GENES KO
#
KEGG Orthology (KO) - Rhodoferax sp. WC2427
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:rhof00010]
D AB3G31_18730 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D AB3G31_17455 pgi; (GenBank) glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D AB3G31_03955 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D AB3G31_01550 fba; (GenBank) class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D AB3G31_08555 tpiA; (GenBank) triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D AB3G31_00260 gap; (GenBank) type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D AB3G31_01520 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D AB3G31_07730 gpmA; (GenBank) 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D AB3G31_18780 histidine phosphatase family protein K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D AB3G31_13880 eno; (GenBank) phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D AB3G31_01545 pyk; (GenBank) pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D AB3G31_06480 ppsA; (GenBank) phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D AB3G31_08180 aceE; (GenBank) pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D AB3G31_08185 aceF; (GenBank) dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D AB3G31_08195 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AB3G31_14465 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AB3G31_03680 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D AB3G31_03195 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D AB3G31_08905 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D AB3G31_14420 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D AB3G31_00565 NAD(P)-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D AB3G31_04845 PQQ-dependent methanol/ethanol family dehydrogenase K00114 exaA; alcohol dehydrogenase (cytochrome c) [EC:1.1.2.8]
D AB3G31_04810 adh; (GenBank) aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D AB3G31_14300 acs; (GenBank) acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D AB3G31_10230 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D AB3G31_16050 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D AB3G31_12065 pgm; (GenBank) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D AB3G31_16935 D-hexose-6-phosphate mutarotase K01792 E5.1.3.15; glucose-6-phosphate 1-epimerase [EC:5.1.3.15]
D AB3G31_21940 phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D AB3G31_11650 phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
C 00020 Citrate cycle (TCA cycle) [PATH:rhof00020]
D AB3G31_04655 gltA; (GenBank) citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D AB3G31_02075 acnA; (GenBank) aconitate hydratase AcnA K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D AB3G31_04705 acnB; (GenBank) bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D AB3G31_07995 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D AB3G31_14630 icd; (GenBank) NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D AB3G31_14475 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D AB3G31_14470 odhB; (GenBank) 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D AB3G31_08195 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AB3G31_14465 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AB3G31_01960 sucD; (GenBank) succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D AB3G31_01965 sucC; (GenBank) ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D AB3G31_04670 sdhA; (GenBank) succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D AB3G31_04665 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D AB3G31_04680 sdhC; (GenBank) succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D AB3G31_04675 sdhD; (GenBank) succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D AB3G31_09040 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D AB3G31_09070 fumC; (GenBank) class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D AB3G31_04690 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D AB3G31_21940 phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D AB3G31_08180 aceE; (GenBank) pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D AB3G31_08185 aceF; (GenBank) dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:rhof00030]
D AB3G31_17455 pgi; (GenBank) glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D AB3G31_17480 zwf; (GenBank) glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D AB3G31_10770 beta-propeller fold lactonase family protein K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31]
D AB3G31_02960 rpe; (GenBank) ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D AB3G31_00245 tkt; (GenBank) transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D AB3G31_06290 transaldolase family protein K00616 TALDO1; transaldolase [EC:2.2.1.2]
D AB3G31_17460 tal; (GenBank) transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D AB3G31_08150 rpiA; (GenBank) ribose-5-phosphate isomerase RpiA K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D AB3G31_18940 ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D AB3G31_12065 pgm; (GenBank) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D AB3G31_02980 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D AB3G31_11780 edd; (GenBank) phosphogluconate dehydratase K01690 edd; phosphogluconate dehydratase [EC:4.2.1.12]
D AB3G31_11775 eda; (GenBank) bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D AB3G31_05380 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
D AB3G31_08100 D-glycerate dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D AB3G31_07130 gluconokinase K00851 idnK; gluconokinase [EC:2.7.1.12]
D AB3G31_05860 sugar kinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D AB3G31_10040 glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D AB3G31_01550 fba; (GenBank) class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D AB3G31_03955 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D AB3G31_11650 phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
C 00040 Pentose and glucuronate interconversions [PATH:rhof00040]
D AB3G31_02960 rpe; (GenBank) ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D AB3G31_01630 FGGY-family carbohydrate kinase K24707 E2.7.1.16; ribulokinase [EC:2.7.1.16]
D AB3G31_19265 xylB; (GenBank) xylulokinase K00854 xylB; xylulokinase [EC:2.7.1.17]
D AB3G31_07820 rhaI; (GenBank) L-rhamnose catabolism isomerase K01820 rhaA; L-rhamnose isomerase / sugar isomerase [EC:5.3.1.14 5.3.1.-]
D AB3G31_19275 dalD; (GenBank) D-arabinitol 4-dehydrogenase K00007 dalD; D-arabinitol 4-dehydrogenase [EC:1.1.1.11]
D AB3G31_00385 SDR family oxidoreductase K22185 xylB; D-xylose 1-dehydrogenase [EC:1.1.1.175]
D AB3G31_03715 SDR family oxidoreductase K22185 xylB; D-xylose 1-dehydrogenase [EC:1.1.1.175]
D AB3G31_06545 SDR family oxidoreductase K22185 xylB; D-xylose 1-dehydrogenase [EC:1.1.1.175]
D AB3G31_16060 SDR family oxidoreductase K22185 xylB; D-xylose 1-dehydrogenase [EC:1.1.1.175]
D AB3G31_03720 SMP-30/gluconolactonase/LRE family protein K14274 xylC; xylono-1,5-lactonase [EC:3.1.1.110]
D AB3G31_13355 IlvD/Edd family dehydratase K22186 xylD; xylonate dehydratase [EC:4.2.1.82]
D AB3G31_05855 aldehyde dehydrogenase family protein K22187 xylA; alpha-ketoglutaric semialdehyde dehydrogenase [EC:1.2.1.-]
D AB3G31_00285 SDR family oxidoreductase K00039 rbtD; ribitol 2-dehydrogenase [EC:1.1.1.56]
C 00051 Fructose and mannose metabolism [PATH:rhof00051]
D AB3G31_06295 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D AB3G31_04390 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D AB3G31_11650 phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D AB3G31_10395 NDP-sugar synthase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D AB3G31_06810 gmd; (GenBank) GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D AB3G31_06805 GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D AB3G31_13340 aldo/keto reductase K00064 E1.1.1.122; D-threo-aldose 1-dehydrogenase [EC:1.1.1.122]
D AB3G31_09560 SDR family oxidoreductase K18333 E1.1.1.435; L-fucose dehydrogenase [EC:1.1.1.435]
D AB3G31_09565 amidohydrolase family protein K07046 E3.1.1.120; L-fucono-1,5-lactonase [EC:3.1.1.120]
D AB3G31_09570 L-fuconate dehydratase K18334 fucD; L-fuconate dehydratase [EC:4.2.1.68]
D AB3G31_01985 SDR family oxidoreductase K18335 E1.1.1.434; 2-dehydro-3-deoxy-L-fuconate 4-dehydrogenase [EC:1.1.1.434]
D AB3G31_07820 rhaI; (GenBank) L-rhamnose catabolism isomerase K01820 rhaA; L-rhamnose isomerase / sugar isomerase [EC:5.3.1.14 5.3.1.-]
D AB3G31_03955 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D AB3G31_03190 SDR family oxidoreductase K08261 E1.1.99.21; D-sorbitol dehydrogenase (acceptor) [EC:1.1.99.21]
D AB3G31_19275 dalD; (GenBank) D-arabinitol 4-dehydrogenase K00007 dalD; D-arabinitol 4-dehydrogenase [EC:1.1.1.11]
D AB3G31_01550 fba; (GenBank) class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D AB3G31_08555 tpiA; (GenBank) triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D AB3G31_16920 GH32 C-terminal domain-containing protein K03332 fruA; fructan beta-fructosidase [EC:3.2.1.80]
D AB3G31_21075 PTS fructose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
C 00052 Galactose metabolism [PATH:rhof00052]
D AB3G31_10230 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D AB3G31_16050 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D AB3G31_05455 galK; (GenBank) galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D AB3G31_05460 UDP-glucose--hexose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D AB3G31_03275 galE; (GenBank) UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D AB3G31_05465 galE; (GenBank) UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D AB3G31_12065 pgm; (GenBank) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D AB3G31_18730 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D AB3G31_06415 glycoside hydrolase family 2 TIM barrel-domain containing protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D AB3G31_05480 alpha-glucosidase/alpha-galactosidase K07406 melA; alpha-galactosidase [EC:3.2.1.22]
D AB3G31_05470 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D AB3G31_03700 2-dehydro-3-deoxygalactonokinase K00883 dgoK; 2-dehydro-3-deoxygalactonokinase [EC:2.7.1.58]
D AB3G31_03695 2-dehydro-3-deoxy-6-phosphogalactonate aldolase K01631 dgoA; 2-dehydro-3-deoxyphosphogalactonate aldolase [EC:4.1.2.21]
D AB3G31_16910 glycoside hydrolase family 32 protein K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D AB3G31_01045 glycoside hydrolase family 31 protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D AB3G31_21965 alpha-amylase family glycosyl hydrolase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D AB3G31_01420 alpha-glucosidase K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10]
D AB3G31_08025 alpha-glucosidase K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10]
C 00053 Ascorbate and aldarate metabolism [PATH:rhof00053]
D AB3G31_05380 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
D AB3G31_13340 aldo/keto reductase K00064 E1.1.1.122; D-threo-aldose 1-dehydrogenase [EC:1.1.1.122]
D AB3G31_05920 NAD-dependent epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D AB3G31_01020 gudD; (GenBank) glucarate dehydratase K01706 gudD; glucarate dehydratase [EC:4.2.1.40]
D AB3G31_10025 gudD; (GenBank) glucarate dehydratase K01706 gudD; glucarate dehydratase [EC:4.2.1.40]
D AB3G31_10735 HpcH/HpaI aldolase/citrate lyase family protein K01630 garL; 2-dehydro-3-deoxyglucarate aldolase [EC:4.1.2.20]
D AB3G31_16015 aldolase/citrate lyase family protein K01630 garL; 2-dehydro-3-deoxyglucarate aldolase [EC:4.1.2.20]
D AB3G31_03710 IlvD/Edd family dehydratase K13875 araC; L-arabonate dehydrase [EC:4.2.1.25]
D AB3G31_06590 IlvD/Edd family dehydratase K13875 araC; L-arabonate dehydrase [EC:4.2.1.25]
D AB3G31_06595 dihydrodipicolinate synthase family protein K13876 araD; 2-keto-3-deoxy-L-arabinonate dehydratase [EC:4.2.1.43]
D AB3G31_19170 dihydrodipicolinate synthase family protein K13876 araD; 2-keto-3-deoxy-L-arabinonate dehydratase [EC:4.2.1.43]
D AB3G31_19165 L-rhamnonate dehydratase K25260 lxyD; L-lyxonate dehydratase [EC:4.2.1.176]
D AB3G31_05850 kdgD; (GenBank) 5-dehydro-4-deoxyglucarate dehydratase K01707 kdgD; 5-dehydro-4-deoxyglucarate dehydratase [EC:4.2.1.41]
D AB3G31_00890 garD; (GenBank) galactarate dehydratase K01708 garD; galactarate dehydratase [EC:4.2.1.42]
D AB3G31_05835 NAD(P)-dependent oxidoreductase K18981 udh; uronate dehydrogenase [EC:1.1.1.203]
C 00500 Starch and sucrose metabolism [PATH:rhof00500]
D AB3G31_16910 glycoside hydrolase family 32 protein K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D AB3G31_01045 glycoside hydrolase family 31 protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D AB3G31_21965 alpha-amylase family glycosyl hydrolase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D AB3G31_21675 alpha-amylase family glycosyl hydrolase K05341 E2.4.1.4; amylosucrase [EC:2.4.1.4]
D AB3G31_00290 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D AB3G31_04925 glycoside hydrolase family 3 N-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D AB3G31_14040 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D AB3G31_20750 glycoside hydrolase family 3 N-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D AB3G31_07000 GH1 family beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D AB3G31_02425 rfbF; (GenBank) glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D AB3G31_11640 glgC; (GenBank) glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D AB3G31_11645 glgA; (GenBank) glycogen synthase GlgA K00703 glgA; starch synthase [EC:2.4.1.21]
D AB3G31_11630 glgB; (GenBank) 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D AB3G31_11635 glycogen/starch/alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D AB3G31_11600 alpha-amylase family glycosyl hydrolase K05343 treS; maltose alpha-D-glucosyltransferase / alpha-amylase [EC:5.4.99.16 3.2.1.1]
D AB3G31_01420 alpha-glucosidase K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10]
D AB3G31_08025 alpha-glucosidase K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10]
D AB3G31_11595 malQ; (GenBank) 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D AB3G31_11625 glgX; (GenBank) glycogen debranching protein GlgX K01214 ISA; isoamylase [EC:3.2.1.68]
D AB3G31_18250 treZ; (GenBank) malto-oligosyltrehalose trehalohydrolase K01236 treZ; maltooligosyltrehalose trehalohydrolase [EC:3.2.1.141]
D AB3G31_12065 pgm; (GenBank) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D AB3G31_18730 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D AB3G31_17455 pgi; (GenBank) glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D AB3G31_06295 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D AB3G31_11650 phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
C 00620 Pyruvate metabolism [PATH:rhof00620]
D AB3G31_14300 acs; (GenBank) acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D AB3G31_08180 aceE; (GenBank) pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D AB3G31_08185 aceF; (GenBank) dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D AB3G31_08195 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AB3G31_14465 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AB3G31_03195 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D AB3G31_08905 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D AB3G31_14420 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D AB3G31_00565 NAD(P)-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D AB3G31_04845 PQQ-dependent methanol/ethanol family dehydrogenase K00114 exaA; alcohol dehydrogenase (cytochrome c) [EC:1.1.2.8]
D AB3G31_01545 pyk; (GenBank) pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D AB3G31_09850 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D AB3G31_02840 accB; (GenBank) acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D AB3G31_02845 accC; (GenBank) acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D AB3G31_04595 accD; (GenBank) acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D AB3G31_15255 biotin carboxylase N-terminal domain-containing protein K11263 bccA; acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14]
D AB3G31_04810 adh; (GenBank) aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D AB3G31_05745 malonate decarboxylase subunit alpha K01026 pct; propionate CoA-transferase [EC:2.8.3.1]
D AB3G31_04180 alpha-hydroxy acid oxidase K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3]
D AB3G31_03680 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D AB3G31_00635 FAD-linked oxidase C-terminal domain-containing protein K00102 LDHD; D-lactate dehydrogenase (cytochrome) [EC:1.1.2.4]
D AB3G31_21195 aldA; (GenBank) aldehyde dehydrogenase K07248 aldA; lactaldehyde dehydrogenase / glycolaldehyde dehydrogenase [EC:1.2.1.22 1.2.1.21]
D AB3G31_11765 gloA; (GenBank) lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D AB3G31_13750 VOC family protein K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D AB3G31_13800 VOC family protein K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D AB3G31_10070 gloB; (GenBank) hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D AB3G31_19365 glyoxylate/hydroxypyruvate reductase A K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D AB3G31_08100 D-glycerate dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D AB3G31_07625 NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D AB3G31_22025 NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D AB3G31_04690 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D AB3G31_09040 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D AB3G31_09070 fumC; (GenBank) class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D AB3G31_04385 ppc; (GenBank) phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D AB3G31_21940 phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D AB3G31_06480 ppsA; (GenBank) phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D AB3G31_20175 malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9]
D AB3G31_05740 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AB3G31_13825 bktB; (GenBank) beta-ketothiolase BktB K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AB3G31_17595 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AB3G31_19020 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AB3G31_12150 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D AB3G31_12155 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D AB3G31_12085 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:rhof00630]
D AB3G31_18370 aceA; (GenBank) isocitrate lyase K01637 ICL; isocitrate/methylisocitrate lyase [EC:4.1.3.1 4.1.3.30]
D AB3G31_20175 malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9]
D AB3G31_04690 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D AB3G31_04655 gltA; (GenBank) citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D AB3G31_02075 acnA; (GenBank) aconitate hydratase AcnA K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D AB3G31_04705 acnB; (GenBank) bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D AB3G31_14300 acs; (GenBank) acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D AB3G31_05740 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AB3G31_13825 bktB; (GenBank) beta-ketothiolase BktB K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AB3G31_17595 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AB3G31_19020 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AB3G31_17590 phbB; (GenBank) acetoacetyl-CoA reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D AB3G31_13760 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3]
D AB3G31_13765 acyl-CoA carboxylase subunit beta K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D AB3G31_15255 biotin carboxylase N-terminal domain-containing protein K11263 bccA; acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14]
D AB3G31_13775 scpA; (GenBank) methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D AB3G31_17930 FAD-linked oxidase C-terminal domain-containing protein K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]
D AB3G31_17935 glcE; (GenBank) glycolate oxidase subunit GlcE K11472 glcE; glycolate dehydrogenase FAD-binding subunit [EC:1.1.99.14]
D AB3G31_17940 glcF; (GenBank) glycolate oxidase subunit GlcF K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14]
D AB3G31_06165 catalase K03781 katE; catalase [EC:1.11.1.6]
D AB3G31_19365 glyoxylate/hydroxypyruvate reductase A K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D AB3G31_08100 D-glycerate dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D AB3G31_02035 gph; (GenBank) phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D AB3G31_04395 HAD-IA family hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D AB3G31_02275 PLP-dependent aminotransferase family protein K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D AB3G31_13930 PLP-dependent aminotransferase family protein K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D AB3G31_00410 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D AB3G31_13400 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D AB3G31_16435 glyA; (GenBank) serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D AB3G31_18175 glyA; (GenBank) serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D AB3G31_11345 gcvP; (GenBank) aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D AB3G31_11355 gcvT; (GenBank) glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D AB3G31_08195 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AB3G31_14465 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AB3G31_11350 gcvH; (GenBank) glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D AB3G31_08420 hydroxypyruvate isomerase family protein K01816 hyi; hydroxypyruvate isomerase [EC:5.3.1.22]
D AB3G31_10035 2-hydroxy-3-oxopropionate reductase K00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60]
D AB3G31_10040 glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D AB3G31_21195 aldA; (GenBank) aldehyde dehydrogenase K07248 aldA; lactaldehyde dehydrogenase / glycolaldehyde dehydrogenase [EC:1.2.1.22 1.2.1.21]
D AB3G31_07880 tartrate dehydrogenase K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83]
D AB3G31_11775 eda; (GenBank) bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D AB3G31_05370 formate dehydrogenase subunit delta K00126 fdsD; formate dehydrogenase subunit delta [EC:1.17.1.9]
D AB3G31_05360 fdhF; (GenBank) formate dehydrogenase subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D AB3G31_05355 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region domain-containing protein K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D AB3G31_05350 formate dehydrogenase subunit gamma K00127 fdoI; formate dehydrogenase subunit gamma
D AB3G31_17310 kynB; (GenBank) arylformamidase K07130 kynB; arylformamidase [EC:3.5.1.9]
D AB3G31_01265 purU; (GenBank) formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D AB3G31_18260 purU; (GenBank) formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D AB3G31_16830 hutG; (GenBank) N-formylglutamate deformylase K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68]
D AB3G31_19810 hutG; (GenBank) N-formylglutamate deformylase K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68]
C 00640 Propanoate metabolism [PATH:rhof00640]
D AB3G31_14300 acs; (GenBank) acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D AB3G31_13820 propionate--CoA ligase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D AB3G31_05745 malonate decarboxylase subunit alpha K01026 pct; propionate CoA-transferase [EC:2.8.3.1]
D AB3G31_08195 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AB3G31_14465 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AB3G31_00390 MDR family oxidoreductase K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-]
D AB3G31_18415 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D AB3G31_09850 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D AB3G31_02840 accB; (GenBank) acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D AB3G31_02845 accC; (GenBank) acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D AB3G31_04595 accD; (GenBank) acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D AB3G31_15255 biotin carboxylase N-terminal domain-containing protein K11263 bccA; acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14]
D AB3G31_02125 gabT; (GenBank) 4-aminobutyrate--2-oxoglutarate transaminase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D AB3G31_00660 aspartate aminotransferase family protein K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D AB3G31_13760 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3]
D AB3G31_13765 acyl-CoA carboxylase subunit beta K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D AB3G31_13775 scpA; (GenBank) methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D AB3G31_01965 sucC; (GenBank) ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D AB3G31_01960 sucD; (GenBank) succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D AB3G31_15540 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D AB3G31_02075 acnA; (GenBank) aconitate hydratase AcnA K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D AB3G31_04705 acnB; (GenBank) bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D AB3G31_18370 aceA; (GenBank) isocitrate lyase K01637 ICL; isocitrate/methylisocitrate lyase [EC:4.1.3.1 4.1.3.30]
D AB3G31_03680 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D AB3G31_11320 iron-containing alcohol dehydrogenase K08325 yqhD; NADP-dependent alcohol dehydrogenase [EC:1.1.-.-]
C 00650 Butanoate metabolism [PATH:rhof00650]
D AB3G31_05740 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AB3G31_13825 bktB; (GenBank) beta-ketothiolase BktB K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AB3G31_17595 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AB3G31_19020 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AB3G31_21430 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D AB3G31_02010 3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase family protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D AB3G31_12090 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D AB3G31_18415 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D AB3G31_15190 alpha/beta fold hydrolase K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D AB3G31_17600 phaC; (GenBank) class I poly(R)-hydroxyalkanoic acid synthase K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D AB3G31_06770 phaZ; (GenBank) polyhydroxyalkanoate depolymerase K05973 phaZ; poly(3-hydroxybutyrate) depolymerase [EC:3.1.1.75]
D AB3G31_13730 phaZ; (GenBank) polyhydroxyalkanoate depolymerase K05973 phaZ; poly(3-hydroxybutyrate) depolymerase [EC:3.1.1.75]
D AB3G31_17590 phbB; (GenBank) acetoacetyl-CoA reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D AB3G31_07880 tartrate dehydrogenase K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83]
D AB3G31_04670 sdhA; (GenBank) succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D AB3G31_04665 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D AB3G31_04680 sdhC; (GenBank) succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D AB3G31_04675 sdhD; (GenBank) succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D AB3G31_06430 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D AB3G31_02125 gabT; (GenBank) 4-aminobutyrate--2-oxoglutarate transaminase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D AB3G31_02120 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D AB3G31_16065 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D AB3G31_08455 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D AB3G31_20170 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D AB3G31_09385 CoA transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D AB3G31_09390 CoA transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D AB3G31_10340 3-hydroxybutyrate dehydrogenase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30]
D AB3G31_10345 acetoacetate decarboxylase K01574 adc; acetoacetate decarboxylase [EC:4.1.1.4]
D AB3G31_13060 acetolactate synthase 3 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D AB3G31_17270 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D AB3G31_13055 ilvN; (GenBank) acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D AB3G31_03180 SDR family NAD(P)-dependent oxidoreductase K18009 budC; meso-butanediol dehydrogenase / (S,S)-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.- 1.1.1.76 1.1.1.304]
D AB3G31_12085 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00660 C5-Branched dibasic acid metabolism [PATH:rhof00660]
D AB3G31_13060 acetolactate synthase 3 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D AB3G31_17270 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D AB3G31_13055 ilvN; (GenBank) acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D AB3G31_11015 CaiB/BaiF CoA-transferase family protein K18289 ict-P; itaconate CoA-transferase [EC:2.8.3.- 2.8.3.22]
D AB3G31_01965 sucC; (GenBank) ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D AB3G31_01960 sucD; (GenBank) succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D AB3G31_09645 ligK; (GenBank) 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17]
D AB3G31_04645 leuC; (GenBank) 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D AB3G31_04635 leuD; (GenBank) 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D AB3G31_04630 leuB; (GenBank) 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:rhof00562]
D AB3G31_00940 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D AB3G31_07055 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D AB3G31_13995 phosphocholine-specific phospholipase C K01114 plc; phospholipase C [EC:3.1.4.3]
D AB3G31_00685 Gfo/Idh/MocA family oxidoreductase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D AB3G31_03250 iolG; (GenBank) inositol 2-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D AB3G31_07040 iolG; (GenBank) inositol 2-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D AB3G31_07045 Gfo/Idh/MocA family oxidoreductase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D AB3G31_08415 iolG; (GenBank) inositol 2-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D AB3G31_07035 TIM barrel protein K06606 iolI; 2-keto-myo-inositol isomerase [EC:5.3.99.11]
D AB3G31_14915 iolE; (GenBank) myo-inosose-2 dehydratase K03335 iolE; inosose dehydratase [EC:4.2.1.44]
D AB3G31_14910 iolD; (GenBank) 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) K03336 iolD; 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) [EC:3.7.1.22]
D AB3G31_14920 iolB; (GenBank) 5-deoxy-glucuronate isomerase K03337 iolB; 5-deoxy-glucuronate isomerase [EC:5.3.1.30]
D AB3G31_14905 iolC; (GenBank) 5-dehydro-2-deoxygluconokinase K03338 iolC; 5-dehydro-2-deoxygluconokinase [EC:2.7.1.92]
D AB3G31_15540 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D AB3G31_08555 tpiA; (GenBank) triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D AB3G31_16045
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:rhof00190]
D AB3G31_08570 NADH-quinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D AB3G31_08575 NADH-quinone oxidoreductase subunit B family protein K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D AB3G31_08580 NADH-quinone oxidoreductase subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D AB3G31_08585 NADH-quinone oxidoreductase subunit D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D AB3G31_08590 nuoE; (GenBank) NADH-quinone oxidoreductase subunit NuoE K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D AB3G31_08595 nuoF; (GenBank) NADH-quinone oxidoreductase subunit NuoF K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D AB3G31_08600 nuoG; (GenBank) NADH-quinone oxidoreductase subunit NuoG K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D AB3G31_08605 nuoH; (GenBank) NADH-quinone oxidoreductase subunit NuoH K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D AB3G31_08610 nuoI; (GenBank) NADH-quinone oxidoreductase subunit NuoI K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D AB3G31_08615 NADH-quinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D AB3G31_08620 nuoK; (GenBank) NADH-quinone oxidoreductase subunit NuoK K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D AB3G31_08625 nuoL; (GenBank) NADH-quinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D AB3G31_08630 NADH-quinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D AB3G31_08635 nuoN; (GenBank) NADH-quinone oxidoreductase subunit NuoN K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D AB3G31_03610 NAD(P)/FAD-dependent oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D AB3G31_04670 sdhA; (GenBank) succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D AB3G31_04665 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D AB3G31_04680 sdhC; (GenBank) succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D AB3G31_04675 sdhD; (GenBank) succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D AB3G31_04270 petA; (GenBank) ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D AB3G31_04275 cytochrome bc complex cytochrome b subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D AB3G31_04280 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D AB3G31_17960 cyoE; (GenBank) heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
D AB3G31_13205 cyoD; (GenBank) cytochrome o ubiquinol oxidase subunit IV K02300 cyoD; cytochrome o ubiquinol oxidase subunit IV
D AB3G31_17210 cytochrome C oxidase subunit IV family protein K02277 coxD; cytochrome c oxidase subunit IV [EC:7.1.1.9]
D AB3G31_17215 heme-copper oxidase subunit III family protein K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D AB3G31_17220 cytochrome c oxidase subunit 3 K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D AB3G31_17985 cytochrome c oxidase subunit 3 K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D AB3G31_17225 cbb3-type cytochrome c oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D AB3G31_18005 ctaD; (GenBank) cytochrome c oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D AB3G31_17230 cytochrome c oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D AB3G31_18010 coxB; (GenBank) cytochrome c oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D AB3G31_17995 cytochrome c oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D AB3G31_17965 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D AB3G31_02225 ccoN; (GenBank) cytochrome-c oxidase, cbb3-type subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D AB3G31_02220 ccoO; (GenBank) cytochrome-c oxidase, cbb3-type subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D AB3G31_02215 cbb3-type cytochrome c oxidase subunit 3 K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D AB3G31_02210 ccoP; (GenBank) cytochrome-c oxidase, cbb3-type subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D AB3G31_13200 cyoC; (GenBank) cytochrome o ubiquinol oxidase subunit III K02299 cyoC; cytochrome o ubiquinol oxidase subunit III
D AB3G31_13195 cyoB; (GenBank) cytochrome o ubiquinol oxidase subunit I K02298 cyoB; cytochrome o ubiquinol oxidase subunit I [EC:7.1.1.3]
D AB3G31_13190 cyoA; (GenBank) ubiquinol oxidase subunit II K02297 cyoA; cytochrome o ubiquinol oxidase subunit II [EC:7.1.1.3]
D AB3G31_16245 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D AB3G31_16240 cydB; (GenBank) cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D AB3G31_16235 cydX; (GenBank) cytochrome bd-I oxidase subunit CydX K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7]
D AB3G31_04850 c-type cytochrome K08738 CYC; cytochrome c
D AB3G31_14285 c-type cytochrome K08738 CYC; cytochrome c
D AB3G31_18345 c-type cytochrome K08738 CYC; cytochrome c
D AB3G31_20940 atpA; (GenBank) F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D AB3G31_20930 atpD; (GenBank) F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D AB3G31_20935 atpG; (GenBank) F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D AB3G31_20945 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D AB3G31_20925 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D AB3G31_20960 atpB; (GenBank) F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D AB3G31_20950 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D AB3G31_20955 atpE; (GenBank) F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D AB3G31_13655 ppa; (GenBank) inorganic diphosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D AB3G31_11840 ppk1; (GenBank) polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D AB3G31_11085 ppk2; (GenBank) polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D AB3G31_11240 ppk2; (GenBank) polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:rhof00710]
D AB3G31_01520 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D AB3G31_00260 gap; (GenBank) type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D AB3G31_01550 fba; (GenBank) class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D AB3G31_03955 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D AB3G31_00245 tkt; (GenBank) transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D AB3G31_08150 rpiA; (GenBank) ribose-5-phosphate isomerase RpiA K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D AB3G31_08555 tpiA; (GenBank) triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D AB3G31_02960 rpe; (GenBank) ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D AB3G31_06290 transaldolase family protein K00616 TALDO1; transaldolase [EC:2.2.1.2]
D AB3G31_17460 tal; (GenBank) transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D AB3G31_04385 ppc; (GenBank) phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D AB3G31_07625 NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D AB3G31_22025 NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D AB3G31_04690 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
C 00720 Other carbon fixation pathways [PATH:rhof00720]
D AB3G31_06480 ppsA; (GenBank) phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D AB3G31_04385 ppc; (GenBank) phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D AB3G31_04690 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D AB3G31_09040 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D AB3G31_09070 fumC; (GenBank) class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D AB3G31_04670 sdhA; (GenBank) succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D AB3G31_04665 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D AB3G31_04680 sdhC; (GenBank) succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D AB3G31_04675 sdhD; (GenBank) succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D AB3G31_01960 sucD; (GenBank) succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D AB3G31_01965 sucC; (GenBank) ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D AB3G31_05740 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AB3G31_13825 bktB; (GenBank) beta-ketothiolase BktB K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AB3G31_17595 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AB3G31_19020 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AB3G31_07995 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D AB3G31_14630 icd; (GenBank) NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D AB3G31_02075 acnA; (GenBank) aconitate hydratase AcnA K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D AB3G31_04705 acnB; (GenBank) bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D AB3G31_09850 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D AB3G31_02840 accB; (GenBank) acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D AB3G31_02845 accC; (GenBank) acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D AB3G31_04595 accD; (GenBank) acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D AB3G31_11020 MaoC family dehydratase N-terminal domain-containing protein K09709 meh; 3-methylfumaryl-CoA hydratase [EC:4.2.1.153]
D AB3G31_13775 scpA; (GenBank) methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D AB3G31_08165 folD; (GenBank) bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D AB3G31_18975 metF; (GenBank) methylenetetrahydrofolate reductase [NAD(P)H] K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D AB3G31_14300 acs; (GenBank) acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
C 00680 Methane metabolism [PATH:rhof00680]
D AB3G31_21495 fdhA; (GenBank) formaldehyde dehydrogenase, glutathione-independent K00148 fdhA; glutathione-independent formaldehyde dehydrogenase [EC:1.2.1.46]
D AB3G31_08910 gfa; (GenBank) S-(hydroxymethyl)glutathione synthase K03396 gfa; S-(hydroxymethyl)glutathione synthase [EC:4.4.1.22]
D AB3G31_03195 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D AB3G31_08905 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D AB3G31_14420 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D AB3G31_03200 fghA; (GenBank) S-formylglutathione hydrolase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12]
D AB3G31_14425 fghA; (GenBank) S-formylglutathione hydrolase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12]
D AB3G31_05360 fdhF; (GenBank) formate dehydrogenase subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D AB3G31_05355 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region domain-containing protein K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D AB3G31_05350 formate dehydrogenase subunit gamma K00127 fdoI; formate dehydrogenase subunit gamma
D AB3G31_05370 formate dehydrogenase subunit delta K00126 fdsD; formate dehydrogenase subunit delta [EC:1.17.1.9]
D AB3G31_16435 glyA; (GenBank) serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D AB3G31_18175 glyA; (GenBank) serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D AB3G31_10040 glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D AB3G31_13880 eno; (GenBank) phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D AB3G31_04385 ppc; (GenBank) phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D AB3G31_04690 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D AB3G31_01550 fba; (GenBank) class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D AB3G31_03955 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D AB3G31_14300 acs; (GenBank) acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D AB3G31_06480 ppsA; (GenBank) phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D AB3G31_07730 gpmA; (GenBank) 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D AB3G31_18780 histidine phosphatase family protein K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D AB3G31_14695 D-2-hydroxyacid dehydrogenase family protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D AB3G31_16700 serA; (GenBank) phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D AB3G31_05560 serC; (GenBank) 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D AB3G31_12945 serB; (GenBank) phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 00910 Nitrogen metabolism [PATH:rhof00910]
D AB3G31_09775 MFS transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D AB3G31_08965 CmpA/NrtA family ABC transporter substrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D AB3G31_08960 ntrB; (GenBank) nitrate ABC transporter permease K15577 nrtB; nitrate/nitrite transport system permease protein
D AB3G31_08955 ABC transporter ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D AB3G31_14535 molybdopterin-dependent oxidoreductase K00372 nasC; assimilatory nitrate reductase catalytic subunit [EC:1.7.99.-]
D AB3G31_14525 nirB; (GenBank) nitrite reductase large subunit NirB K26139 nasD; nitrite reductase [NAD(P)H] large subunit [EC:1.7.1.4]
D AB3G31_14530 nirD; (GenBank) nitrite reductase small subunit NirD K26138 nasE; nitrite reductase [NAD(P)H] small subunit [EC:1.7.1.4]
D AB3G31_16890 nirB; (GenBank) nitrite reductase large subunit NirB K00362 nirB; nitrite reductase (NADH) large subunit [EC:1.7.1.15]
D AB3G31_16885 nirD; (GenBank) nitrite reductase small subunit NirD K00363 nirD; nitrite reductase (NADH) small subunit [EC:1.7.1.15]
D AB3G31_12990 nitronate monooxygenase family protein K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D AB3G31_20745 nitronate monooxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D AB3G31_11490 Nit6803 family nitrilase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D AB3G31_08655 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D AB3G31_00410 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D AB3G31_13400 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D AB3G31_03440 glutamate synthase-related protein K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D AB3G31_03445 glutamate synthase subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D AB3G31_11510 cynS; (GenBank) cyanase K01725 cynS; cyanate lyase [EC:4.2.1.104]
D AB3G31_19050 can; (GenBank) carbonate dehydratase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
D AB3G31_18790 carbonic anhydrase family protein K01674 cah; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:rhof00920]
D AB3G31_10190 sulfate ABC transporter substrate-binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D AB3G31_08750 sulfate ABC transporter substrate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D AB3G31_10195 cysT; (GenBank) sulfate ABC transporter permease subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D AB3G31_10200 cysW; (GenBank) sulfate ABC transporter permease subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D AB3G31_10205 sulfate ABC transporter ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D AB3G31_12385 tauA; (GenBank) taurine ABC transporter substrate-binding protein K15551 tauA; taurine transport system substrate-binding protein
D AB3G31_12395 ABC transporter permease subunit K15552 tauC; taurine transport system permease protein
D AB3G31_12390 ABC transporter ATP-binding protein K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7]
D AB3G31_08875 tauD; (GenBank) taurine dioxygenase K03119 tauD; taurine dioxygenase [EC:1.14.11.17]
D AB3G31_08760 sulfonate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D AB3G31_08765 sulfonate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D AB3G31_08800 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D AB3G31_08830 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D AB3G31_10060 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D AB3G31_10140 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D AB3G31_10145 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D AB3G31_08780 ssuC; (GenBank) aliphatic sulfonate ABC transporter permease SsuC K15554 ssuC; sulfonate transport system permease protein
D AB3G31_08825 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein
D AB3G31_08785 ATP-binding cassette domain-containing protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D AB3G31_08820 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D AB3G31_08770 ssuD; (GenBank) FMNH2-dependent alkanesulfonate monooxygenase K04091 ssuD; alkanesulfonate monooxygenase [EC:1.14.14.5 1.14.14.34]
D AB3G31_08810 LLM class flavin-dependent oxidoreductase K04091 ssuD; alkanesulfonate monooxygenase [EC:1.14.14.5 1.14.14.34]
D AB3G31_08755 ssuE; (GenBank) NADPH-dependent FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
D AB3G31_09865 GTP-binding protein K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D AB3G31_09870 cysD; (GenBank) sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D AB3G31_09875 phosphoadenosine phosphosulfate reductase family protein K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D AB3G31_09885 nitrite/sulfite reductase K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
D AB3G31_05030 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D AB3G31_07065 cysE; (GenBank) serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D AB3G31_08925 epsC; (GenBank) serine O-acetyltransferase EpsC K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D AB3G31_08900 cysK; (GenBank) cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D AB3G31_19685 cysK; (GenBank) cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D AB3G31_01870 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D AB3G31_10105 acyl-CoA synthetase K20034 dmdB; 3-(methylthio)propionyl---CoA ligase [EC:6.2.1.44]
D AB3G31_12115 3-(methylthio)propionyl-CoA ligase K20034 dmdB; 3-(methylthio)propionyl---CoA ligase [EC:6.2.1.44]
D AB3G31_02000 acyl-CoA dehydrogenase C-terminal domain-containing protein K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
D AB3G31_12995 acyl-CoA dehydrogenase K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
D AB3G31_05730 crotonase/enoyl-CoA hydratase family protein K20036 dmdD; (methylthio)acryloyl-CoA hydratase [EC:4.2.1.155]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:rhof00061]
D AB3G31_09850 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D AB3G31_02840 accB; (GenBank) acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D AB3G31_02845 accC; (GenBank) acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D AB3G31_04595 accD; (GenBank) acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D AB3G31_15255 biotin carboxylase N-terminal domain-containing protein K11263 bccA; acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14]
D AB3G31_04450 acpP; (GenBank) acyl carrier protein K02078 acpP; acyl carrier protein
D AB3G31_07360 acyl carrier protein K02078 acpP; acyl carrier protein
D AB3G31_19765 phosphopantetheine-binding protein K02078 acpP; acyl carrier protein
D AB3G31_04440 fabD; (GenBank) ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D AB3G31_21320 acyltransferase domain-containing protein K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D AB3G31_04435 beta-ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D AB3G31_18465 iron-containing redox enzyme family protein K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D AB3G31_19730 beta-ketoacyl-[acyl-carrier-protein] synthase family protein K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D AB3G31_04455 fabF; (GenBank) beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D AB3G31_03815 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AB3G31_04445 fabG; (GenBank) 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AB3G31_07585 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AB3G31_10740 SDR family NAD(P)-dependent oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AB3G31_19715 fabG; (GenBank) 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AB3G31_05200 fabZ; (GenBank) 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D AB3G31_11520 fabI; (GenBank) enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D AB3G31_06655 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D AB3G31_19180 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D AB3G31_20345 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:rhof00071]
D AB3G31_05740 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AB3G31_13825 bktB; (GenBank) beta-ketothiolase BktB K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AB3G31_17595 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AB3G31_19020 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AB3G31_02020 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D AB3G31_12085 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D AB3G31_18415 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D AB3G31_02010 3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase family protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D AB3G31_12090 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D AB3G31_12485 acyl-CoA dehydrogenase family protein K00255 ACADL; long-chain-acyl-CoA dehydrogenase [EC:1.3.8.8]
D AB3G31_15560 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D AB3G31_06655 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D AB3G31_19180 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D AB3G31_20345 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D AB3G31_07020 FAD-dependent oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D AB3G31_19390 FAD-dependent oxidoreductase K05297 rubB; rubredoxin---NAD+ reductase [EC:1.18.1.1]
D AB3G31_03195 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D AB3G31_08905 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D AB3G31_14420 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
C 00073 Cutin, suberine and wax biosynthesis
C 00074 Mycolic acid biosynthesis [PATH:rhof00074]
D AB3G31_15255 biotin carboxylase N-terminal domain-containing protein K11263 bccA; acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14]
D AB3G31_04525 acpS; (GenBank) holo-ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D AB3G31_04450 acpP; (GenBank) acyl carrier protein K02078 acpP; acyl carrier protein
D AB3G31_07360 acyl carrier protein K02078 acpP; acyl carrier protein
D AB3G31_19765 phosphopantetheine-binding protein K02078 acpP; acyl carrier protein
D AB3G31_04440 fabD; (GenBank) ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D AB3G31_21320 acyltransferase domain-containing protein K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:rhof00561]
D AB3G31_10040 glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D AB3G31_00565 NAD(P)-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D AB3G31_20025 glpK; (GenBank) glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30]
D AB3G31_04430 plsX; (GenBank) phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D AB3G31_04000 plsY; (GenBank) glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D AB3G31_18125 lysophospholipid acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D AB3G31_19075 lysophospholipid acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D AB3G31_13085 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D AB3G31_16115 triacylglycerol lipase K01046 lip; triacylglycerol lipase [EC:3.1.1.3]
D AB3G31_05480 alpha-glucosidase/alpha-galactosidase K07406 melA; alpha-galactosidase [EC:3.2.1.22]
D AB3G31_05470 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
C 00564 Glycerophospholipid metabolism [PATH:rhof00564]
D AB3G31_07750 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D AB3G31_19985 glycerol-3-phosphate dehydrogenase/oxidase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D AB3G31_04000 plsY; (GenBank) glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D AB3G31_18125 lysophospholipid acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D AB3G31_19075 lysophospholipid acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D AB3G31_13085 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D AB3G31_13995 phosphocholine-specific phospholipase C K01114 plc; phospholipase C [EC:3.1.4.3]
D AB3G31_01645 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D AB3G31_10835 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D AB3G31_17360 ugpQ; (GenBank) glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D AB3G31_00050 ethanolamine ammonia-lyase subunit EutB K03735 eutB; ethanolamine ammonia-lyase large subunit [EC:4.3.1.7]
D AB3G31_00055 eutC; (GenBank) ethanolamine ammonia-lyase subunit EutC K03736 eutC; ethanolamine ammonia-lyase small subunit [EC:4.3.1.7]
D AB3G31_05170 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D AB3G31_19525 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D AB3G31_12160 pssA; (GenBank) CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D AB3G31_21040 CDP-alcohol phosphatidyltransferase family protein K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D AB3G31_01260 asd; (GenBank) archaetidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D AB3G31_15450 pgsA; (GenBank) CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D AB3G31_20070 phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27]
D AB3G31_06210 cls; (GenBank) cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D AB3G31_08345 clsB; (GenBank) cardiolipin synthase ClsB K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D AB3G31_09335 phospholipase D-like domain-containing protein K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
C 00565 Ether lipid metabolism [PATH:rhof00565]
D AB3G31_01645 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D AB3G31_13995 phosphocholine-specific phospholipase C K01114 plc; phospholipase C [EC:3.1.4.3]
C 00600 Sphingolipid metabolism [PATH:rhof00600]
D AB3G31_06415 glycoside hydrolase family 2 TIM barrel-domain containing protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D AB3G31_05480 alpha-glucosidase/alpha-galactosidase K07406 melA; alpha-galactosidase [EC:3.2.1.22]
D AB3G31_05470 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
C 00590 Arachidonic acid metabolism
D AB3G31_01645 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00591 Linoleic acid metabolism
D AB3G31_01645 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00592 alpha-Linolenic acid metabolism [PATH:rhof00592]
D AB3G31_01645 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D AB3G31_02020 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D AB3G31_12085 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids [PATH:rhof01040]
D AB3G31_04960 fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D AB3G31_09320 arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D AB3G31_20675 acyl-CoA thioesterase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:rhof00230]
D AB3G31_08645 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D AB3G31_12065 pgm; (GenBank) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D AB3G31_02980 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D AB3G31_04060 purF; (GenBank) amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D AB3G31_10850 purD; (GenBank) phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D AB3G31_04915 purN; (GenBank) phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D AB3G31_21445 purT; (GenBank) formate-dependent phosphoribosylglycinamide formyltransferase K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21]
D AB3G31_12410 purL; (GenBank) phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D AB3G31_07310 purM; (GenBank) phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D AB3G31_01770 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D AB3G31_01775 purE; (GenBank) 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D AB3G31_01850 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D AB3G31_01880 purB; (GenBank) adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D AB3G31_18350 purH; (GenBank) bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D AB3G31_22135 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D AB3G31_17760 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D AB3G31_18955 ushA; (GenBank) bifunctional UDP-sugar hydrolase/5'-nucleotidase UshA K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D AB3G31_15420 surE; (GenBank) 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D AB3G31_04030 pyrimidine/purine nucleoside phosphorylase K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
D AB3G31_17610 pgeF; (GenBank) peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D AB3G31_11900 guaB; (GenBank) IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D AB3G31_09225 ndk; (GenBank) nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D AB3G31_16770 rdgB; (GenBank) RdgB/HAM1 family non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D AB3G31_08370 xdhA; (GenBank) xanthine dehydrogenase small subunit K13481 xdhA; xanthine dehydrogenase small subunit [EC:1.17.1.4]
D AB3G31_08365 xdhB; (GenBank) xanthine dehydrogenase molybdopterin binding subunit K13482 xdhB; xanthine dehydrogenase large subunit [EC:1.17.1.4]
D AB3G31_11890 guaA; (GenBank) glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D AB3G31_08495 guaD; (GenBank) guanine deaminase K01487 guaD; guanine deaminase [EC:3.5.4.3]
D AB3G31_04210 gmk; (GenBank) guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D AB3G31_02875 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D AB3G31_02870 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D AB3G31_03395 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D AB3G31_04200 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D AB3G31_09900 Ppx/GppA phosphatase family protein K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D AB3G31_05090 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5]
D AB3G31_01915 adenylate/guanylate cyclase domain-containing protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D AB3G31_01940 adenylate/guanylate cyclase domain-containing protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D AB3G31_08530 adenylate/guanylate cyclase domain-containing protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D AB3G31_11850 adenylate/guanylate cyclase domain-containing protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D AB3G31_15145 adenylate/guanylate cyclase domain-containing protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D AB3G31_09300 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D AB3G31_21475 AMP nucleosidase K01241 amn; AMP nucleosidase [EC:3.2.2.4]
D AB3G31_08400 adenosine deaminase K21053 ade; adenine deaminase [EC:3.5.4.2]
D AB3G31_14675 adk; (GenBank) adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D AB3G31_07295 symmetrical bis(5'-nucleosyl)-tetraphosphatase K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41]
D AB3G31_09865 GTP-binding protein K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D AB3G31_09870 cysD; (GenBank) sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D AB3G31_07650 uraH; (GenBank) hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
D AB3G31_21635 uraD; (GenBank) 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase K13485 PRHOXNB; 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase [EC:4.1.1.97]
D AB3G31_00490 aspartate/glutamate racemase family protein K16841 hpxA; allantoin racemase [EC:5.1.99.3]
D AB3G31_07640 puuE; (GenBank) allantoinase PuuE K16842 hpxB; allantoinase [EC:3.5.2.5]
D AB3G31_07635 uraD; (GenBank) 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase K02083 allC; allantoate deiminase [EC:3.5.3.9]
D AB3G31_13175 ureidoglycolate lyase K01483 allA; ureidoglycolate lyase [EC:4.3.2.3]
D AB3G31_06890 ureC; (GenBank) urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D AB3G31_06895 urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5]
D AB3G31_06905 urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5]
D AB3G31_15290 gamma-glutamyltransferase family protein K22602 hpxW; oxamate amidohydrolase [EC:3.5.1.126]
D AB3G31_06945
C 00240 Pyrimidine metabolism [PATH:rhof00240]
D AB3G31_05230 carB; (GenBank) carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D AB3G31_05225 carA; (GenBank) glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D AB3G31_18135 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D AB3G31_18130 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D AB3G31_20620 pyrC; (GenBank) dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D AB3G31_08145 quinone-dependent dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D AB3G31_00970 pyrE; (GenBank) orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D AB3G31_20570 pyrF; (GenBank) orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D AB3G31_05155 pyrH; (GenBank) UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D AB3G31_09225 ndk; (GenBank) nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D AB3G31_10895 Maf family protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D AB3G31_15460 YgjP-like metallopeptidase domain-containing protein K07043 upp; UTP pyrophosphatase [EC:3.6.1.-]
D AB3G31_13870 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D AB3G31_05930 udk; (GenBank) uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D AB3G31_17760 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D AB3G31_18955 ushA; (GenBank) bifunctional UDP-sugar hydrolase/5'-nucleotidase UshA K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D AB3G31_15420 surE; (GenBank) 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D AB3G31_04030 pyrimidine/purine nucleoside phosphorylase K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
D AB3G31_10820 upp; (GenBank) uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D AB3G31_18140 pyrR; (GenBank) bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D AB3G31_07220 amidohydrolase family protein K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D AB3G31_11375 amidohydrolase family protein K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D AB3G31_08500 dcd; (GenBank) dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D AB3G31_02875 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D AB3G31_02870 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D AB3G31_11990 tmk; (GenBank) dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D AB3G31_13860 dut; (GenBank) dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D AB3G31_06730 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D AB3G31_20400 NAD(P)-dependent oxidoreductase K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1]
D AB3G31_20405 preA; (GenBank) NAD-dependent dihydropyrimidine dehydrogenase subunit PreA K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1]
D AB3G31_13165 hydA; (GenBank) dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D AB3G31_20410 hydA; (GenBank) dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D AB3G31_20415 Zn-dependent hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D AB3G31_08790 malonic semialdehyde reductase K09019 rutE; 3-hydroxypropanoate dehydrogenase [EC:1.1.1.-]
D AB3G31_05765
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:rhof00250]
D AB3G31_20250 nadB; (GenBank) L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D AB3G31_13555 amino acid racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D AB3G31_14680 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D AB3G31_05665 isoaspartyl peptidase/L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D AB3G31_19100 type II asparaginase K05597 aspQ; glutamin-(asparagin-)ase [EC:3.5.1.38]
D AB3G31_03510 asparagine synthase-related protein K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D AB3G31_17005 XrtA/PEP-CTERM system amidotransferase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D AB3G31_04735 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D AB3G31_10585 aspA; (GenBank) aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D AB3G31_20655 aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D AB3G31_02105 argG; (GenBank) argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D AB3G31_03560 argH; (GenBank) argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D AB3G31_09300 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D AB3G31_01880 purB; (GenBank) adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D AB3G31_18135 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D AB3G31_06430 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D AB3G31_02125 gabT; (GenBank) 4-aminobutyrate--2-oxoglutarate transaminase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D AB3G31_02120 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D AB3G31_16065 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D AB3G31_03440 glutamate synthase-related protein K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D AB3G31_03445 glutamate synthase subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D AB3G31_08655 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D AB3G31_16860 pruA; (GenBank) L-glutamate gamma-semialdehyde dehydrogenase K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88]
D AB3G31_16835 proline dehydrogenase family protein K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D AB3G31_20785 L-glutamate gamma-semialdehyde dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D AB3G31_00410 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D AB3G31_13400 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D AB3G31_05230 carB; (GenBank) carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D AB3G31_05225 carA; (GenBank) glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D AB3G31_21720 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D AB3G31_14770 SIS domain-containing protein K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D AB3G31_17910 glmS; (GenBank) glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D AB3G31_04060 purF; (GenBank) amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:rhof00260]
D AB3G31_07560 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D AB3G31_04625 asd; (GenBank) aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D AB3G31_04740 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D AB3G31_05020 homoserine kinase K02204 thrB2; homoserine kinase type II [EC:2.7.1.39]
D AB3G31_04750 thrC; (GenBank) threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D AB3G31_18030 ltaE; (GenBank) low-specificity L-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D AB3G31_16435 glyA; (GenBank) serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D AB3G31_18175 glyA; (GenBank) serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D AB3G31_19365 glyoxylate/hydroxypyruvate reductase A K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D AB3G31_08100 D-glycerate dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D AB3G31_10040 glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D AB3G31_07730 gpmA; (GenBank) 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D AB3G31_18780 histidine phosphatase family protein K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D AB3G31_14695 D-2-hydroxyacid dehydrogenase family protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D AB3G31_16700 serA; (GenBank) phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D AB3G31_05560 serC; (GenBank) 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D AB3G31_12945 serB; (GenBank) phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D AB3G31_17515 kbl; (GenBank) glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D AB3G31_11345 gcvP; (GenBank) aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D AB3G31_11355 gcvT; (GenBank) glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D AB3G31_08195 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AB3G31_14465 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AB3G31_11350 gcvH; (GenBank) glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D AB3G31_12160 pssA; (GenBank) CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D AB3G31_21040 CDP-alcohol phosphatidyltransferase family protein K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D AB3G31_18270 betA; (GenBank) choline dehydrogenase K00108 betA; choline dehydrogenase [EC:1.1.99.1]
D AB3G31_18265 betB; (GenBank) betaine-aldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8]
D AB3G31_16795 aromatic ring-hydroxylating dioxygenase subunit alpha K00479 gbcA; glycine betaine monooxygenase A [EC:1.14.13.251]
D AB3G31_18215 aromatic ring-hydroxylating dioxygenase subunit alpha K00479 gbcA; glycine betaine monooxygenase A [EC:1.14.13.251]
D AB3G31_18220 hybrid-cluster NAD(P)-dependent oxidoreductase K21832 gbcB; glycine betaine monooxygenase B [EC:1.14.13.251]
D AB3G31_18195 NADH:flavin oxidoreductase K21833 dgcA; N,N-dimethylglycine/sarcosine dehydrogenase [EC:1.5.7.3]
D AB3G31_18200 (Fe-S)-binding protein K21834 dgcB; N,N-dimethylglycine/sarcosine dehydrogenase ferredoxin subunit
D AB3G31_18205 electron transfer flavoprotein subunit alpha/FixB family protein K25960 etfA; N,N-dimethylglycine/sarcosine catabolism electron transfer flavoprotein subunit alpha
D AB3G31_18210 hypothetical protein K25961 etfB; N,N-dimethylglycine/sarcosine catabolism electron transfer flavoprotein subunit beta
D AB3G31_18165 sarcosine oxidase subunit alpha family protein K00302 soxA; sarcosine oxidase, subunit alpha [EC:1.5.3.24 1.5.3.1]
D AB3G31_18155 sarcosine oxidase subunit beta family protein K00303 soxB; sarcosine oxidase, subunit beta [EC:1.5.3.24 1.5.3.1]
D AB3G31_18170 sarcosine oxidase subunit gamma family protein K00305 soxG; sarcosine oxidase, subunit gamma [EC:1.5.3.24 1.5.3.1]
D AB3G31_18160 sarcosine oxidase subunit delta K00304 soxD; sarcosine oxidase, subunit delta [EC:1.5.3.24 1.5.3.1]
D AB3G31_18275 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D AB3G31_06515 threonine/serine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D AB3G31_17685 ilvA; (GenBank) threonine ammonia-lyase, biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D AB3G31_13845 aspartate/glutamate racemase family protein K25316 racX; amino-acid racemase [EC:5.1.1.10]
D AB3G31_04600 trpA; (GenBank) tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D AB3G31_04605 trpB; (GenBank) tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:rhof00270]
D AB3G31_07065 cysE; (GenBank) serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D AB3G31_08925 epsC; (GenBank) serine O-acetyltransferase EpsC K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D AB3G31_08900 cysK; (GenBank) cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D AB3G31_19685 cysK; (GenBank) cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D AB3G31_09310 PLP-dependent transferase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D AB3G31_09615 mmuM; (GenBank) homocysteine S-methyltransferase K00547 mmuM; homocysteine S-methyltransferase [EC:2.1.1.10]
D AB3G31_21875 metH; (GenBank) methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D AB3G31_21900 homocysteine S-methyltransferase family protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D AB3G31_03285 metK; (GenBank) methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D AB3G31_16290 S-adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D AB3G31_06140 polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
D AB3G31_20340 5'-methylthioadenosine/adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D AB3G31_17610 pgeF; (GenBank) peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D AB3G31_11080 amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D AB3G31_03905 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D AB3G31_18985 ahcY; (GenBank) adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D AB3G31_07560 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D AB3G31_04625 asd; (GenBank) aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D AB3G31_04740 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D AB3G31_01870 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D AB3G31_12180 cystathionine gamma-synthase family protein K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D AB3G31_00825 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D AB3G31_16265 gshA; (GenBank) glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D AB3G31_20260 gshA; (GenBank) glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D AB3G31_20215 gshB; (GenBank) glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D AB3G31_05030 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D AB3G31_03680 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D AB3G31_13845 aspartate/glutamate racemase family protein K25316 racX; amino-acid racemase [EC:5.1.1.10]
D AB3G31_04690 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D AB3G31_18275 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D AB3G31_16145 cysM; (GenBank) cysteine synthase CysM K12339 cysM; S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) [EC:2.5.1.144]
D AB3G31_14695 D-2-hydroxyacid dehydrogenase family protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D AB3G31_16700 serA; (GenBank) phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D AB3G31_05560 serC; (GenBank) 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:rhof00280]
D AB3G31_00825 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D AB3G31_08195 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AB3G31_14465 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AB3G31_08480 isovaleryl-CoA dehydrogenase K00253 IVD; isovaleryl-CoA dehydrogenase [EC:1.3.8.4]
D AB3G31_18415 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D AB3G31_02020 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D AB3G31_12085 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D AB3G31_13760 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3]
D AB3G31_13765 acyl-CoA carboxylase subunit beta K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D AB3G31_15255 biotin carboxylase N-terminal domain-containing protein K11263 bccA; acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14]
D AB3G31_13775 scpA; (GenBank) methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D AB3G31_21240 NAD(P)-dependent oxidoreductase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D AB3G31_15540 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D AB3G31_14250 malonyl-CoA synthase K18661 matB; malonyl-CoA/methylmalonyl-CoA synthetase [EC:6.2.1.76 6.2.1.-]
D AB3G31_00660 aspartate aminotransferase family protein K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D AB3G31_08460 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha K01968 MCCC1; 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4]
D AB3G31_08470 carboxyl transferase domain-containing protein K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4]
D AB3G31_08465 enoyl-CoA hydratase/isomerase family protein K13766 liuC; methylglutaconyl-CoA hydratase [EC:4.2.1.18]
D AB3G31_08455 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D AB3G31_20170 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D AB3G31_09385 CoA transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D AB3G31_09390 CoA transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D AB3G31_05740 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AB3G31_13825 bktB; (GenBank) beta-ketothiolase BktB K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AB3G31_17595 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AB3G31_19020 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AB3G31_20855
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:rhof00290]
D AB3G31_06515 threonine/serine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D AB3G31_17685 ilvA; (GenBank) threonine ammonia-lyase, biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D AB3G31_04645 leuC; (GenBank) 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D AB3G31_04635 leuD; (GenBank) 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D AB3G31_04630 leuB; (GenBank) 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D AB3G31_13060 acetolactate synthase 3 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D AB3G31_17270 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D AB3G31_13055 ilvN; (GenBank) acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D AB3G31_13050 ilvC; (GenBank) ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D AB3G31_14275 ilvD; (GenBank) dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D AB3G31_00825 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D AB3G31_04735 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D AB3G31_12150 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D AB3G31_12155 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:rhof00300]
D AB3G31_04740 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D AB3G31_07560 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D AB3G31_04625 asd; (GenBank) aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D AB3G31_09425 dihydrodipicolinate synthase family protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D AB3G31_14375 dapA; (GenBank) 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D AB3G31_20295 dapB; (GenBank) 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D AB3G31_13115 dapD; (GenBank) 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D AB3G31_17325 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D AB3G31_13110 dapC; (GenBank) succinyldiaminopimelate transaminase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
D AB3G31_13125 dapE; (GenBank) succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D AB3G31_19675 dapF; (GenBank) diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D AB3G31_03335 lysA; (GenBank) diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D AB3G31_05630 pyridoxal-dependent decarboxylase, exosortase A system-associated K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D AB3G31_02275 PLP-dependent aminotransferase family protein K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D AB3G31_13930 PLP-dependent aminotransferase family protein K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D AB3G31_19595 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D AB3G31_19590 murF; (GenBank) UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:rhof00310]
D AB3G31_17260 aldehyde dehydrogenase family protein K26061 amaB; L-aminoadipate-semialdehyde dehydrogenase
D AB3G31_14470 odhB; (GenBank) 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D AB3G31_08195 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AB3G31_14465 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AB3G31_15560 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D AB3G31_18415 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D AB3G31_05740 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AB3G31_13825 bktB; (GenBank) beta-ketothiolase BktB K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AB3G31_17595 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AB3G31_19020 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AB3G31_15940 NAD(P)/FAD-dependent oxidoreductase K00468 davB; lysine 2-monooxygenase [EC:1.13.12.2]
D AB3G31_15945 carbon-nitrogen hydrolase family protein K01506 davA; 5-aminopentanamidase [EC:3.5.1.30]
D AB3G31_13845 aspartate/glutamate racemase family protein K25316 racX; amino-acid racemase [EC:5.1.1.10]
D AB3G31_09435 gamma-aminobutyraldehyde dehydrogenase K00137 prr; aminobutyraldehyde dehydrogenase [EC:1.2.1.19]
D AB3G31_02120 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D AB3G31_16065 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D AB3G31_15555 CaiB/BaiF CoA-transferase family protein K01041 gcdG; glutaryl-CoA transferase [EC:2.8.3.-]
D AB3G31_20975 D-amino acid aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D AB3G31_06135 delta(1)-pyrroline-2-carboxylate reductase family protein K19743 lhpI; 1-piperideine-2-carboxylate/1-pyrroline-2-carboxylate reductase [NAD(P)H] [EC:1.5.1.1]
C 00220 Arginine biosynthesis [PATH:rhof00220]
D AB3G31_17320 argF; (GenBank) ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D AB3G31_02105 argG; (GenBank) argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D AB3G31_03560 argH; (GenBank) argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D AB3G31_20795 rocF; (GenBank) arginase K01476 rocF; arginase [EC:3.5.3.1]
D AB3G31_13465 uca; (GenBank) urea carboxylase K01941 uca; urea carboxylase [EC:6.3.4.6]
D AB3G31_13460 atzF; (GenBank) allophanate hydrolase K01457 atzF; allophanate hydrolase [EC:3.5.1.54]
D AB3G31_19235 atzF; (GenBank) allophanate hydrolase K01457 atzF; allophanate hydrolase [EC:3.5.1.54]
D AB3G31_06890 ureC; (GenBank) urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D AB3G31_06895 urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5]
D AB3G31_06905 urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5]
D AB3G31_21720 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D AB3G31_19100 type II asparaginase K05597 aspQ; glutamin-(asparagin-)ase [EC:3.5.1.38]
D AB3G31_00410 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D AB3G31_13400 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D AB3G31_05230 carB; (GenBank) carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D AB3G31_05225 carA; (GenBank) glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D AB3G31_08655 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D AB3G31_04735 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D AB3G31_10245 argA; (GenBank) amino-acid N-acetyltransferase K14682 argAB; amino-acid N-acetyltransferase [EC:2.3.1.1]
D AB3G31_04310 argJ; (GenBank) bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D AB3G31_20585 argB; (GenBank) acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D AB3G31_01970 argC; (GenBank) N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D AB3G31_17325 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:rhof00330]
D AB3G31_02175 creatininase family protein K01470 E3.5.2.10; creatinine amidohydrolase [EC:3.5.2.10]
D AB3G31_07220 amidohydrolase family protein K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D AB3G31_11375 amidohydrolase family protein K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D AB3G31_10420 arginine/lysine/ornithine decarboxylase K01584 adiA; arginine decarboxylase [EC:4.1.1.19]
D AB3G31_06140 polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
D AB3G31_16290 S-adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D AB3G31_13395 aspartate aminotransferase family protein K12256 spuC; putrescine---pyruvate transaminase [EC:2.6.1.113]
D AB3G31_09435 gamma-aminobutyraldehyde dehydrogenase K00137 prr; aminobutyraldehyde dehydrogenase [EC:1.2.1.19]
D AB3G31_13370 aldehyde dehydrogenase K12254 kauB; 4-guanidinobutyraldehyde dehydrogenase / NAD-dependent aldehyde dehydrogenase [EC:1.2.1.54 1.2.1.-]
D AB3G31_21245 aldehyde dehydrogenase K12254 kauB; 4-guanidinobutyraldehyde dehydrogenase / NAD-dependent aldehyde dehydrogenase [EC:1.2.1.54 1.2.1.-]
D AB3G31_20795 rocF; (GenBank) arginase K01476 rocF; arginase [EC:3.5.3.1]
D AB3G31_21490 proC; (GenBank) pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D AB3G31_16835 proline dehydrogenase family protein K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D AB3G31_20785 L-glutamate gamma-semialdehyde dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D AB3G31_20800 ornithine cyclodeaminase K01750 ocd; ornithine cyclodeaminase [EC:4.3.1.12]
D AB3G31_16860 pruA; (GenBank) L-glutamate gamma-semialdehyde dehydrogenase K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88]
D AB3G31_16560 proB; (GenBank) glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D AB3G31_20265 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D AB3G31_06075 pip; (GenBank) prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D AB3G31_16085 2OG-Fe(II) oxygenase K00472 P4HA; prolyl 4-hydroxylase [EC:1.14.11.2]
D AB3G31_20975 D-amino acid aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D AB3G31_06130 lhpH; (GenBank) trans-3-hydroxy-L-proline dehydratase K01777 prdF; proline racemase [EC:5.1.1.4]
D AB3G31_06135 delta(1)-pyrroline-2-carboxylate reductase family protein K19743 lhpI; 1-piperideine-2-carboxylate/1-pyrroline-2-carboxylate reductase [NAD(P)H] [EC:1.5.1.1]
D AB3G31_03790
C 00340 Histidine metabolism [PATH:rhof00340]
D AB3G31_03500 hisG; (GenBank) ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D AB3G31_09295 ATP phosphoribosyltransferase regulatory subunit K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit
D AB3G31_04220 phosphoribosyl-ATP diphosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]
D AB3G31_04215 hisI; (GenBank) phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D AB3G31_16940 hisA; (GenBank) 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D AB3G31_16945 hisH; (GenBank) imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D AB3G31_16930 hisF; (GenBank) imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D AB3G31_16950 hisB; (GenBank) imidazoleglycerol-phosphate dehydratase HisB K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D AB3G31_07520 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D AB3G31_14180 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D AB3G31_16955 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D AB3G31_03505 hisD; (GenBank) histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D AB3G31_14445 hutH; (GenBank) histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D AB3G31_19790 hutH; (GenBank) histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D AB3G31_19785 hutU; (GenBank) urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49]
D AB3G31_19800 hutI; (GenBank) imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7]
D AB3G31_19805 formimidoylglutamate deiminase K05603 hutF; formimidoylglutamate deiminase [EC:3.5.3.13]
D AB3G31_16830 hutG; (GenBank) N-formylglutamate deformylase K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68]
D AB3G31_19810 hutG; (GenBank) N-formylglutamate deformylase K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68]
C 00350 Tyrosine metabolism [PATH:rhof00350]
D AB3G31_07520 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D AB3G31_14180 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D AB3G31_16955 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D AB3G31_11080 amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D AB3G31_09095 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D AB3G31_16600 hppD; (GenBank) 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D AB3G31_16615 maiA; (GenBank) maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2]
D AB3G31_16610 fahA; (GenBank) fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
D AB3G31_01285 fumarylacetoacetate hydrolase family protein K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2]
D AB3G31_03195 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D AB3G31_08905 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D AB3G31_14420 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D AB3G31_09665 Gfo/Idh/MocA family oxidoreductase K10219 ligC; 2-hydroxy-4-carboxymuconate semialdehyde hemiacetal dehydrogenase [EC:1.1.1.312]
D AB3G31_04025 5-carboxymethyl-2-hydroxymuconate Delta-isomerase K01826 hpaF; 5-carboxymethyl-2-hydroxymuconate isomerase [EC:5.3.3.10]
D AB3G31_10030 aldolase/citrate lyase family protein K02510 hpaI; 4-hydroxy-2-oxoheptanedioate aldolase [EC:4.1.2.52]
D AB3G31_02120 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D AB3G31_16065 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D AB3G31_16525 fumarylacetoacetate hydrolase family protein K16165 nagK; fumarylpyruvate hydrolase [EC:3.7.1.20]
C 00360 Phenylalanine metabolism [PATH:rhof00360]
D AB3G31_19140 phhA; (GenBank) phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
D AB3G31_18415 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D AB3G31_21430 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D AB3G31_07520 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D AB3G31_14180 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D AB3G31_16955 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D AB3G31_11080 amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D AB3G31_00155 GNAT family N-acetyltransferase K03825 aaaT; L-phenylalanine/L-methionine N-acetyltransferase [EC:2.3.1.53 2.3.1.-]
D AB3G31_09095 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D AB3G31_16600 hppD; (GenBank) 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D AB3G31_05135 FAD-dependent oxidoreductase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D AB3G31_08260 D-amino acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D AB3G31_13545 D-amino acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D AB3G31_21995 D-amino acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D AB3G31_20975 D-amino acid aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D AB3G31_20445 katG; (GenBank) catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21]
D AB3G31_08425 MocE family 2Fe-2S type ferredoxin K05710 hcaC; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin component
D AB3G31_14975 MocE family 2Fe-2S type ferredoxin K05710 hcaC; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin component
D AB3G31_07020 FAD-dependent oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
C 00380 Tryptophan metabolism [PATH:rhof00380]
D AB3G31_17300 kynA; (GenBank) tryptophan 2,3-dioxygenase K00453 TDO2; tryptophan 2,3-dioxygenase [EC:1.13.11.11]
D AB3G31_17310 kynB; (GenBank) arylformamidase K07130 kynB; arylformamidase [EC:3.5.1.9]
D AB3G31_17305 kynU; (GenBank) kynureninase K01556 KYNU; kynureninase [EC:3.7.1.3]
D AB3G31_14470 odhB; (GenBank) 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D AB3G31_08195 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AB3G31_14465 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AB3G31_15560 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D AB3G31_18415 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D AB3G31_05740 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AB3G31_13825 bktB; (GenBank) beta-ketothiolase BktB K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AB3G31_17595 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AB3G31_19020 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AB3G31_11490 Nit6803 family nitrilase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D AB3G31_06165 catalase K03781 katE; catalase [EC:1.11.1.6]
D AB3G31_20445 katG; (GenBank) catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:rhof00400]
D AB3G31_02815 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D AB3G31_03390 aroB; (GenBank) 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D AB3G31_03625 type II 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D AB3G31_14120 type II 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D AB3G31_02780 aroE; (GenBank) shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D AB3G31_14100 aroE; (GenBank) shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D AB3G31_03385 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D AB3G31_05545 bifunctional 3-phosphoshikimate 1-carboxyvinyltransferase/cytidylate kinase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D AB3G31_06785 aroC; (GenBank) chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D AB3G31_20690 trpE; (GenBank) anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D AB3G31_20700 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D AB3G31_20710 trpD; (GenBank) anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D AB3G31_04610 phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D AB3G31_02770 trpC; (GenBank) indole-3-glycerol phosphate synthase TrpC K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D AB3G31_04600 trpA; (GenBank) tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D AB3G31_04605 trpB; (GenBank) tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D AB3G31_05555 pheA; (GenBank) prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D AB3G31_05550 prephenate dehydrogenase/arogenate dehydrogenase family protein K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D AB3G31_07520 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D AB3G31_14180 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D AB3G31_16955 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D AB3G31_11080 amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D AB3G31_19140 phhA; (GenBank) phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
D AB3G31_19690 Rid family hydrolase K18240 xanB2; chorismate lyase / 3-hydroxybenzoate synthase [EC:4.1.3.40 4.1.3.45]
D AB3G31_00420 type 1 glutamine amidotransferase K07010 K07010; putative glutamine amidotransferase
D AB3G31_10960
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:rhof00410]
D AB3G31_06430 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D AB3G31_02125 gabT; (GenBank) 4-aminobutyrate--2-oxoglutarate transaminase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D AB3G31_09435 gamma-aminobutyraldehyde dehydrogenase K00137 prr; aminobutyraldehyde dehydrogenase [EC:1.2.1.19]
D AB3G31_18675 panC; (GenBank) pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D AB3G31_20400 NAD(P)-dependent oxidoreductase K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1]
D AB3G31_20405 preA; (GenBank) NAD-dependent dihydropyrimidine dehydrogenase subunit PreA K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1]
D AB3G31_13165 hydA; (GenBank) dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D AB3G31_20410 hydA; (GenBank) dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D AB3G31_20415 Zn-dependent hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D AB3G31_00660 aspartate aminotransferase family protein K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D AB3G31_18415 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D AB3G31_15540 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
C 00430 Taurine and hypotaurine metabolism [PATH:rhof00430]
D AB3G31_06430 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D AB3G31_10435 ggt; (GenBank) gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D AB3G31_08875 tauD; (GenBank) taurine dioxygenase K03119 tauD; taurine dioxygenase [EC:1.14.11.17]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:rhof00450]
D AB3G31_09310 PLP-dependent transferase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D AB3G31_21875 metH; (GenBank) methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D AB3G31_21900 homocysteine S-methyltransferase family protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D AB3G31_08935 family 2A encapsulin nanocompartment cargo protein cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D AB3G31_09855 NAD(P)/FAD-dependent oxidoreductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D AB3G31_15395 trxB; (GenBank) thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D AB3G31_09865 GTP-binding protein K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D AB3G31_09870 cysD; (GenBank) sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D AB3G31_13685 selD; (GenBank) selenide, water dikinase SelD K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D AB3G31_05305 metG; (GenBank) methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:rhof00460]
D AB3G31_00290 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D AB3G31_04925 glycoside hydrolase family 3 N-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D AB3G31_14040 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D AB3G31_20750 glycoside hydrolase family 3 N-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D AB3G31_07000 GH1 family beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D AB3G31_11490 Nit6803 family nitrilase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D AB3G31_10435 ggt; (GenBank) gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D AB3G31_14680 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D AB3G31_05665 isoaspartyl peptidase/L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D AB3G31_16435 glyA; (GenBank) serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D AB3G31_18175 glyA; (GenBank) serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:rhof00470]
D AB3G31_21700 alr; (GenBank) alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D AB3G31_20975 D-amino acid aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D AB3G31_19560 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D AB3G31_13845 aspartate/glutamate racemase family protein K25316 racX; amino-acid racemase [EC:5.1.1.10]
D AB3G31_21720 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D AB3G31_19100 type II asparaginase K05597 aspQ; glutamin-(asparagin-)ase [EC:3.5.1.38]
D AB3G31_09035 aspartate/glutamate racemase family protein K01776 murI; glutamate racemase [EC:5.1.1.3]
D AB3G31_19580 murD; (GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D AB3G31_08230 DUF1611 domain-containing protein K26272 dgcN; D-glutamate N-acetyltransferase [EC:2.3.1.312]
D AB3G31_08235 dgcA; (GenBank) N-acetyl-D-Glu racemase DgcA K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25]
D AB3G31_13555 amino acid racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D AB3G31_19675 dapF; (GenBank) diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D AB3G31_03335 lysA; (GenBank) diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D AB3G31_05630 pyridoxal-dependent decarboxylase, exosortase A system-associated K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D AB3G31_06130 lhpH; (GenBank) trans-3-hydroxy-L-proline dehydratase K01777 prdF; proline racemase [EC:5.1.1.4]
D AB3G31_15515 4-hydroxyproline epimerase K12658 lhpA; 4-hydroxyproline epimerase [EC:5.1.1.8]
D AB3G31_15500 FAD/NAD(P)-binding oxidoreductase K22549 lhpC; D-hydroxyproline dehydrogenase subunit alpha [EC:1.5.99.-]
D AB3G31_15510 FAD-dependent oxidoreductase K21061 lhpB; D-hydroxyproline dehydrogenase subunit beta [EC:1.5.99.-]
D AB3G31_15505 (2Fe-2S)-binding protein K22550 lhpD; D-hydroxyproline dehydrogenase subunit gamma
D AB3G31_15520 dihydrodipicolinate synthase family protein K21062 lhpC; 1-pyrroline-4-hydroxy-2-carboxylate deaminase [EC:3.5.4.22]
D AB3G31_05135 FAD-dependent oxidoreductase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D AB3G31_08260 D-amino acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D AB3G31_13545 D-amino acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D AB3G31_21995 D-amino acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
C 00480 Glutathione metabolism [PATH:rhof00480]
D AB3G31_10435 ggt; (GenBank) gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D AB3G31_15265 5-oxoprolinase subunit PxpA K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D AB3G31_05065 YbdK family carboxylate-amine ligase K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-]
D AB3G31_16265 gshA; (GenBank) glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D AB3G31_20260 gshA; (GenBank) glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D AB3G31_20215 gshB; (GenBank) glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D AB3G31_10375 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D AB3G31_03960 pepN; (GenBank) aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D AB3G31_00080 gstA; (GenBank) glutathione transferase GstA K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D AB3G31_00775 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D AB3G31_03205 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D AB3G31_06775 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D AB3G31_09680 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D AB3G31_13565 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D AB3G31_17280 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D AB3G31_18720 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D AB3G31_21660 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D AB3G31_21480 gorA; (GenBank) glutathione-disulfide reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D AB3G31_07995 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D AB3G31_14630 icd; (GenBank) NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D AB3G31_17480 zwf; (GenBank) glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D AB3G31_12910 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D AB3G31_21715 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D AB3G31_01250 peroxiredoxin K24138 prx3; glutaredoxin/glutathione-dependent peroxiredoxin [EC:1.11.1.25 1.11.1.27]
D AB3G31_06140 polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
D AB3G31_01875
D AB3G31_03790
B
B 09107 Glycan biosynthesis and metabolism
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:rhof00520]
D AB3G31_18885 anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D AB3G31_05580 HAD-IA family hydrolase K22292 mupP; N-acetyl-D-muramate 6-phosphate phosphatase [EC:3.1.3.105]
D AB3G31_22060 phosphotransferase K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221]
D AB3G31_22005 murU; (GenBank) N-acetylmuramate alpha-1-phosphate uridylyltransferase MurU K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99]
D AB3G31_18600 glmU; (GenBank) bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D AB3G31_17040 wecB; (GenBank) UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D AB3G31_21840 wecB; (GenBank) UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D AB3G31_03495 murA; (GenBank) UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D AB3G31_04020 murB; (GenBank) UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D AB3G31_04530 nagZ; (GenBank) beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D AB3G31_14720 nagA; (GenBank) N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D AB3G31_14760 BadF/BadG/BcrA/BcrD ATPase family protein K18676 gspK; glucosamine kinase [EC:2.7.1.8]
D AB3G31_05265 glmM; (GenBank) phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D AB3G31_14770 SIS domain-containing protein K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D AB3G31_17910 glmS; (GenBank) glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D AB3G31_06295 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D AB3G31_17455 pgi; (GenBank) glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D AB3G31_04390 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D AB3G31_11055 alpha-N-arabinofuranosidase K01209 abfA; alpha-L-arabinofuranosidase [EC:3.2.1.55]
D AB3G31_05920 NAD-dependent epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D AB3G31_18730 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D AB3G31_12065 pgm; (GenBank) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D AB3G31_05455 galK; (GenBank) galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D AB3G31_05460 UDP-glucose--hexose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D AB3G31_03275 galE; (GenBank) UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D AB3G31_05465 galE; (GenBank) UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D AB3G31_21075 PTS fructose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D AB3G31_11650 phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D AB3G31_10395 NDP-sugar synthase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D AB3G31_02425 rfbF; (GenBank) glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D AB3G31_11640 glgC; (GenBank) glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D AB3G31_18510 rfbA; (GenBank) glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
C 00541 Biosynthesis of various nucleotide sugars [PATH:rhof00541]
D AB3G31_18600 glmU; (GenBank) bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D AB3G31_17015 nucleotide sugar dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
D AB3G31_04580 nucleoside-diphosphate sugar epimerase/dehydratase K24300 wbpM; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135]
D AB3G31_04545 SDR family oxidoreductase K24310 wbpV; UDP-N-acetyl-alpha-D-quinovosamine dehydrogenase [EC:1.1.1.426]
D AB3G31_22125 KpsF/GutQ family sugar-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D AB3G31_13875 kdsA; (GenBank) 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D AB3G31_22120 HAD hydrolase family protein K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D AB3G31_14670 kdsB; (GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D AB3G31_17040 wecB; (GenBank) UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D AB3G31_21840 wecB; (GenBank) UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D AB3G31_20865 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D AB3G31_19080 gmhB; (GenBank) D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D AB3G31_05520 rfaE1; (GenBank) D-glycero-beta-D-manno-heptose-7-phosphate kinase K21344 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase [EC:2.7.1.167]
D AB3G31_00215 rfaE2; (GenBank) D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase K21345 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase [EC:2.7.7.70]
D AB3G31_05515 rfaD; (GenBank) ADP-glyceromanno-heptose 6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D AB3G31_02425 rfbF; (GenBank) glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D AB3G31_02430 rfbG; (GenBank) CDP-glucose 4,6-dehydratase K01709 rfbG; CDP-glucose 4,6-dehydratase [EC:4.2.1.45]
D AB3G31_17070 CDP-6-deoxy-delta-3,4-glucoseen reductase K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1]
D AB3G31_18510 rfbA; (GenBank) glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D AB3G31_18500 rfbB; (GenBank) dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D AB3G31_02435 rfbC; (GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D AB3G31_18515 rfbC; (GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D AB3G31_18505 rfbD; (GenBank) dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D AB3G31_06830 vioA; (GenBank) dTDP-4-amino-4,6-dideoxy-D-glucose aminotransferase VioA K20429 vioA; dTDP-4-amino-4,6-dideoxy-D-glucose transaminase [EC:2.6.1.33]
D AB3G31_10395 NDP-sugar synthase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D AB3G31_04390 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D AB3G31_06810 gmd; (GenBank) GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D AB3G31_06825 acetyltransferase K17939 perB; GDP-perosamine N-acetyltransferase [EC:2.3.1.227]
D AB3G31_06805 GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:rhof00511]
D AB3G31_06415 glycoside hydrolase family 2 TIM barrel-domain containing protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
C 00540 Lipopolysaccharide biosynthesis [PATH:rhof00540]
D AB3G31_05205 lpxA; (GenBank) acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D AB3G31_19540 lpxC; (GenBank) UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D AB3G31_05195 lpxD; (GenBank) UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D AB3G31_09820 UDP-2,3-diacylglucosamine diphosphatase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D AB3G31_05210 lpxB; (GenBank) lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D AB3G31_14660 lpxK; (GenBank) tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D AB3G31_11665 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D AB3G31_03290 lysophospholipid acyltransferase family protein K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D AB3G31_03295 lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D AB3G31_14430 phosphoethanolamine--lipid A transferase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D AB3G31_10650 acyloxyacyl hydrolase K12976 pagL; lipid A 3-O-deacylase [EC:3.1.1.-]
D AB3G31_11655 waaC; (GenBank) lipopolysaccharide heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D AB3G31_11660 waaC; (GenBank) lipopolysaccharide heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D AB3G31_00835 waaF; (GenBank) lipopolysaccharide heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D AB3G31_13315 glycosyltransferase family 9 protein K02849 waaQ; lipopolysaccharide heptosyltransferase III [EC:2.4.99.25]
D AB3G31_13325 O-antigen ligase family protein K02847 waaL; O-antigen ligase [EC:2.4.99.26]
C 00542 O-Antigen repeat unit biosynthesis
C 00550 Peptidoglycan biosynthesis [PATH:rhof00550]
D AB3G31_03495 murA; (GenBank) UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D AB3G31_04020 murB; (GenBank) UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D AB3G31_19565 murC; (GenBank) UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D AB3G31_19580 murD; (GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D AB3G31_19595 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D AB3G31_19560 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D AB3G31_19590 murF; (GenBank) UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D AB3G31_05165 uppS; (GenBank) polyprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D AB3G31_15855 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D AB3G31_19585 mraY; (GenBank) phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D AB3G31_19570 murG; (GenBank) undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D AB3G31_02775 transglycosylase domain-containing protein K03814 mtgA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D AB3G31_03350 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D AB3G31_17180 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D AB3G31_16645 pbpC; (GenBank) penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D AB3G31_19575 ftsW; (GenBank) putative lipid II flippase FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D AB3G31_02805 rodA; (GenBank) rod shape-determining protein RodA K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D AB3G31_01010 mrdA; (GenBank) penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D AB3G31_19600 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D AB3G31_01170 D-alanyl-D-alanine carboxypeptidase family protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D AB3G31_01745 dacB; (GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
C 00552 Teichoic acid biosynthesis [PATH:rhof00552]
D AB3G31_15855 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D AB3G31_07350 MBOAT family O-acyltransferase K03739 dltB; membrane protein involved in D-alanine export
D AB3G31_04580 nucleoside-diphosphate sugar epimerase/dehydratase K24300 wbpM; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:rhof00543]
D AB3G31_19335 pgaC; (GenBank) poly-beta-1,6-N-acetyl-D-glucosamine synthase K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
D AB3G31_19340 pgaD; (GenBank) poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD K11937 pgaD; biofilm PGA synthesis protein PgaD
D AB3G31_07065 cysE; (GenBank) serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D AB3G31_08925 epsC; (GenBank) serine O-acetyltransferase EpsC K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D AB3G31_07440 glycosyltransferase family 2 protein K16557 exoA; succinoglycan biosynthesis protein ExoA [EC:2.4.-.-]
D AB3G31_05590 glycosyltransferase K16562 exoW; succinoglycan biosynthesis protein ExoW [EC:2.4.-.-]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:rhof00730]
D AB3G31_19030 thiC; (GenBank) phosphomethylpyrimidine synthase ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D AB3G31_12515 thiD; (GenBank) bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D AB3G31_18315 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D AB3G31_11100 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D AB3G31_17650 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D AB3G31_12520 FAD-dependent oxidoreductase K03153 thiO; glycine oxidase [EC:1.4.3.19]
D AB3G31_05055 dxs; (GenBank) 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D AB3G31_12530 thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10]
D AB3G31_12535 thiamine phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D AB3G31_02950 thiL; (GenBank) thiamine-phosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D AB3G31_07525 rsgA; (GenBank) ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D AB3G31_14675 adk; (GenBank) adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:rhof00740]
D AB3G31_16485 ribBA; (GenBank) bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D AB3G31_16480 ribD; (GenBank) bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D AB3G31_07215 HAD-IA family hydrolase K20862 yigB; FMN hydrolase / 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.102 3.1.3.104]
D AB3G31_07775 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D AB3G31_16490 ribH; (GenBank) 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D AB3G31_11275 riboflavin synthase subunit alpha K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D AB3G31_04900 bifunctional riboflavin kinase/FAD synthetase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D AB3G31_08755 ssuE; (GenBank) NADPH-dependent FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
D AB3G31_08645 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
C 00750 Vitamin B6 metabolism [PATH:rhof00750]
D AB3G31_11785 pdxH; (GenBank) pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D AB3G31_05560 serC; (GenBank) 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D AB3G31_04260 pdxA; (GenBank) 4-hydroxythreonine-4-phosphate dehydrogenase PdxA K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D AB3G31_19160 4-hydroxythreonine-4-phosphate dehydrogenase PdxA K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D AB3G31_04515 pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D AB3G31_04750 thrC; (GenBank) threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:rhof00760]
D AB3G31_20250 nadB; (GenBank) L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D AB3G31_20240 nadA; (GenBank) quinolinate synthase NadA K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D AB3G31_20235 nadC; (GenBank) carboxylating nicotinate-nucleotide diphosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D AB3G31_08090 pncB; (GenBank) nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D AB3G31_17760 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D AB3G31_18955 ushA; (GenBank) bifunctional UDP-sugar hydrolase/5'-nucleotidase UshA K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D AB3G31_15420 surE; (GenBank) 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D AB3G31_10860 nadD; (GenBank) nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D AB3G31_13095 NAD+ synthase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D AB3G31_20075 CinA family protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D AB3G31_03030 NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D AB3G31_20355 NAD(P) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D AB3G31_20360 Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D AB3G31_20350 NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
D AB3G31_02120 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D AB3G31_16065 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:rhof00770]
D AB3G31_13060 acetolactate synthase 3 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D AB3G31_17270 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D AB3G31_13055 ilvN; (GenBank) acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D AB3G31_13050 ilvC; (GenBank) ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D AB3G31_14275 ilvD; (GenBank) dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D AB3G31_18670 panB; (GenBank) 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D AB3G31_14080 ketopantoate reductase family protein K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D AB3G31_18675 panC; (GenBank) pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D AB3G31_19865 type III pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D AB3G31_13865 coaBC; (GenBank) bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D AB3G31_18545 coaD; (GenBank) pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D AB3G31_04335 coaE; (GenBank) dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D AB3G31_04525 acpS; (GenBank) holo-ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D AB3G31_00825 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D AB3G31_20400 NAD(P)-dependent oxidoreductase K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1]
D AB3G31_20405 preA; (GenBank) NAD-dependent dihydropyrimidine dehydrogenase subunit PreA K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1]
D AB3G31_13165 hydA; (GenBank) dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D AB3G31_20410 hydA; (GenBank) dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D AB3G31_20415 Zn-dependent hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
C 00780 Biotin metabolism [PATH:rhof00780]
D AB3G31_18020 biotin synthase K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197]
D AB3G31_19730 beta-ketoacyl-[acyl-carrier-protein] synthase family protein K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D AB3G31_04455 fabF; (GenBank) beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D AB3G31_03815 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AB3G31_04445 fabG; (GenBank) 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AB3G31_07585 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AB3G31_10740 SDR family NAD(P)-dependent oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AB3G31_19715 fabG; (GenBank) 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AB3G31_05200 fabZ; (GenBank) 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D AB3G31_11520 fabI; (GenBank) enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D AB3G31_01840 bioF; (GenBank) 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D AB3G31_01845 bioA; (GenBank) adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D AB3G31_01835 bioD; (GenBank) dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D AB3G31_13755 bioB; (GenBank) biotin synthase BioB K01012 bioB; biotin synthase [EC:2.8.1.6]
D AB3G31_00095 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:rhof00785]
D AB3G31_20985 lipB; (GenBank) lipoyl(octanoyl) transferase LipB K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D AB3G31_21030 lipA; (GenBank) lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D AB3G31_08195 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AB3G31_14465 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AB3G31_08180 aceE; (GenBank) pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D AB3G31_08185 aceF; (GenBank) dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D AB3G31_14475 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D AB3G31_14470 odhB; (GenBank) 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D AB3G31_11345 gcvP; (GenBank) aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D AB3G31_11355 gcvT; (GenBank) glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D AB3G31_11350 gcvH; (GenBank) glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:rhof00790]
D AB3G31_07675 folE; (GenBank) GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D AB3G31_08350 alkaline phosphatase D family protein K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D AB3G31_08335 nudB; (GenBank) dihydroneopterin triphosphate diphosphatase K08310 nudB; dihydroneopterin triphosphate diphosphatase [EC:3.6.1.67]
D AB3G31_18750 dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D AB3G31_07335 folK; (GenBank) 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D AB3G31_05260 folP; (GenBank) dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D AB3G31_06725 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D AB3G31_04045 folC; (GenBank) bifunctional tetrahydrofolate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D AB3G31_16485 ribBA; (GenBank) bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D AB3G31_20245 pabB; (GenBank) aminodeoxychorismate synthase component I K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38]
D AB3G31_06860 6-carboxytetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D AB3G31_07530 4a-hydroxytetrahydrobiopterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D AB3G31_19140 phhA; (GenBank) phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
D AB3G31_06865 queE; (GenBank) 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D AB3G31_06605 queC; (GenBank) 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D AB3G31_16080 queF; (GenBank) NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D AB3G31_13690 moaA; (GenBank) GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D AB3G31_01910 moaC; (GenBank) cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D AB3G31_05670 molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D AB3G31_07100 mog; (GenBank) molybdopterin adenylyltransferase K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D AB3G31_04760 glp; (GenBank) gephyrin-like molybdotransferase Glp K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D AB3G31_13695 mobA; (GenBank) molybdenum cofactor guanylyltransferase MobA K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:rhof00670]
D AB3G31_06725 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D AB3G31_08165 folD; (GenBank) bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D AB3G31_16435 glyA; (GenBank) serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D AB3G31_18175 glyA; (GenBank) serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D AB3G31_04915 purN; (GenBank) phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D AB3G31_18350 purH; (GenBank) bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D AB3G31_11355 gcvT; (GenBank) glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D AB3G31_21875 metH; (GenBank) methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D AB3G31_21900 homocysteine S-methyltransferase family protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D AB3G31_06730 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D AB3G31_01265 purU; (GenBank) formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D AB3G31_18260 purU; (GenBank) formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D AB3G31_18975 metF; (GenBank) methylenetetrahydrofolate reductase [NAD(P)H] K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D AB3G31_18660 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
D AB3G31_09615 mmuM; (GenBank) homocysteine S-methyltransferase K00547 mmuM; homocysteine S-methyltransferase [EC:2.1.1.10]
D AB3G31_03285 metK; (GenBank) methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D AB3G31_18985 ahcY; (GenBank) adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D AB3G31_11345 gcvP; (GenBank) aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D AB3G31_08195 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AB3G31_14465 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AB3G31_11350 gcvH; (GenBank) glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D AB3G31_18270 betA; (GenBank) choline dehydrogenase K00108 betA; choline dehydrogenase [EC:1.1.99.1]
D AB3G31_18265 betB; (GenBank) betaine-aldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:rhof00860]
D AB3G31_04065 gltX; (GenBank) glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D AB3G31_17370 hemA; (GenBank) glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D AB3G31_13530 transaminase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D AB3G31_18320 hemL; (GenBank) glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D AB3G31_01145 hemB; (GenBank) porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D AB3G31_04380 hemC; (GenBank) hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D AB3G31_04375 uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D AB3G31_02940 hemE; (GenBank) uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D AB3G31_10855 hemF; (GenBank) oxygen-dependent coproporphyrinogen oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D AB3G31_02185 hemN; (GenBank) oxygen-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D AB3G31_01150 CopD family protein K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-]
D AB3G31_07210 hemH; (GenBank) ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D AB3G31_04370 uroporphyrinogen-III C-methyltransferase K02496 hemX; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D AB3G31_14545 cobA; (GenBank) uroporphyrinogen-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D AB3G31_17960 cyoE; (GenBank) heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
D AB3G31_17965 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D AB3G31_10360 CbiX/SirB N-terminal domain-containing protein K03795 cbiX; sirohydrochlorin cobaltochelatase [EC:4.99.1.3]
D AB3G31_17875 sirohydrochlorin chelatase K03795 cbiX; sirohydrochlorin cobaltochelatase [EC:4.99.1.3]
D AB3G31_17855 cobI; (GenBank) precorrin-2 C(20)-methyltransferase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151]
D AB3G31_17830 cobJ; (GenBank) precorrin-3B C(17)-methyltransferase K05934 cobJ; precorrin-3B C17-methyltransferase / cobalt-factor III methyltransferase [EC:2.1.1.131 2.1.1.272]
D AB3G31_17880 cobM; (GenBank) precorrin-4 C(11)-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271]
D AB3G31_17850 cobalamin biosynthesis central domain-containing protein K02189 cbiG; cobalt-precorrin 5A hydrolase [EC:3.7.1.12]
D AB3G31_17865 cobalt-precorrin-5B (C(1))-methyltransferase K02188 cbiD; cobalt-precorrin-5B (C1)-methyltransferase [EC:2.1.1.195]
D AB3G31_17860 cbiE; (GenBank) precorrin-6y C5,15-methyltransferase (decarboxylating) subunit CbiE K00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase / cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196]
D AB3G31_17870 precorrin-8X methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60]
D AB3G31_17885 cobyrinate a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D AB3G31_00640 cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D AB3G31_14200 cobO; (GenBank) cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D AB3G31_13990 cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D AB3G31_07515 CobD/CbiB family protein K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D AB3G31_14185 cbiB; (GenBank) adenosylcobinamide-phosphate synthase CbiB K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D AB3G31_14220 bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D AB3G31_17690 adenosylcobinamide-GDP ribazoletransferase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D AB3G31_13955 cobT; (GenBank) nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D AB3G31_17695 histidine phosphatase family protein K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73]
D AB3G31_15330 bfr; (GenBank) bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1]
D AB3G31_16340 ferritin-like domain-containing protein K03594 bfr; bacterioferritin [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:rhof00130]
D AB3G31_19690 Rid family hydrolase K18240 xanB2; chorismate lyase / 3-hydroxybenzoate synthase [EC:4.1.3.40 4.1.3.45]
D AB3G31_01405 ubiA; (GenBank) 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D AB3G31_05575 ubiG; (GenBank) bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
D AB3G31_16685 ubiE; (GenBank) bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D AB3G31_17675 coq7; (GenBank) 2-polyprenyl-3-methyl-6-methoxy-1,4-benzoquinone monooxygenase K06134 coq7; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60]
D AB3G31_00745 hotdog fold thioesterase K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28]
D AB3G31_09545 flavodoxin family protein K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D AB3G31_09095 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D AB3G31_16600 hppD; (GenBank) 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D AB3G31_18395
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:rhof00900]
D AB3G31_05055 dxs; (GenBank) 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D AB3G31_05175 ispC; (GenBank) 1-deoxy-D-xylulose-5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D AB3G31_09785 ispD; (GenBank) 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D AB3G31_02990 ispE; (GenBank) 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D AB3G31_09790 ispF; (GenBank) 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D AB3G31_09245 ispG; (GenBank) flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D AB3G31_05445 ispH; (GenBank) 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D AB3G31_05740 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AB3G31_13825 bktB; (GenBank) beta-ketothiolase BktB K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AB3G31_17595 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AB3G31_19020 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AB3G31_05050 polyprenyl synthetase family protein K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D AB3G31_16580 polyprenyl synthetase family protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D AB3G31_05165 uppS; (GenBank) polyprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D AB3G31_07535 M48 family metallopeptidase K06013 STE24; STE24 endopeptidase [EC:3.4.24.84]
D AB3G31_12085 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis [PATH:rhof00906]
D AB3G31_07245 hpnD; (GenBank) presqualene diphosphate synthase HpnD K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation [PATH:rhof00907]
D AB3G31_18415 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D AB3G31_08455 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D AB3G31_20170 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D AB3G31_02020 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D AB3G31_12085 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins [PATH:rhof01051]
D AB3G31_00245 tkt; (GenBank) transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D AB3G31_00720
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:rhof00523]
D AB3G31_18510 rfbA; (GenBank) glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D AB3G31_18500 rfbB; (GenBank) dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D AB3G31_02435 rfbC; (GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D AB3G31_18515 rfbC; (GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D AB3G31_18505 rfbD; (GenBank) dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures [PATH:rhof01054]
D AB3G31_13555 amino acid racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics [PATH:rhof01055]
D AB3G31_04140 alpha-hydroxy acid oxidase K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46]
D AB3G31_18500 rfbB; (GenBank) dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:rhof00946]
D AB3G31_00290 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D AB3G31_04925 glycoside hydrolase family 3 N-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D AB3G31_14040 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D AB3G31_20750 glycoside hydrolase family 3 N-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D AB3G31_07000 GH1 family beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis [PATH:rhof00332]
D AB3G31_16560 proB; (GenBank) glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D AB3G31_20265 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:rhof00261]
D AB3G31_04140 alpha-hydroxy acid oxidase K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46]
D AB3G31_09865 GTP-binding protein K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D AB3G31_09870 cysD; (GenBank) sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D AB3G31_07560 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D AB3G31_04625 asd; (GenBank) aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D AB3G31_09425 dihydrodipicolinate synthase family protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D AB3G31_14375 dapA; (GenBank) 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D AB3G31_20295 dapB; (GenBank) 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:rhof00521]
D AB3G31_18730 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D AB3G31_12065 pgm; (GenBank) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D AB3G31_00940 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D AB3G31_07055 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D AB3G31_00685 Gfo/Idh/MocA family oxidoreductase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D AB3G31_03250 iolG; (GenBank) inositol 2-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D AB3G31_07040 iolG; (GenBank) inositol 2-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D AB3G31_07045 Gfo/Idh/MocA family oxidoreductase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D AB3G31_08415 iolG; (GenBank) inositol 2-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D AB3G31_18510 rfbA; (GenBank) glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D AB3G31_18500 rfbB; (GenBank) dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D AB3G31_02435 rfbC; (GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D AB3G31_18515 rfbC; (GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D AB3G31_18505 rfbD; (GenBank) dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D AB3G31_11650 phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D AB3G31_16045
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D AB3G31_18730 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:rhof00525]
D AB3G31_18510 rfbA; (GenBank) glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D AB3G31_18500 rfbB; (GenBank) dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:rhof00401]
D AB3G31_05550 prephenate dehydrogenase/arogenate dehydrogenase family protein K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D AB3G31_07520 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D AB3G31_14180 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D AB3G31_16955 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D AB3G31_11080 amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D AB3G31_20690 trpE; (GenBank) anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D AB3G31_20700 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D AB3G31_04440 fabD; (GenBank) ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D AB3G31_21320 acyltransferase domain-containing protein K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D AB3G31_03815 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AB3G31_04445 fabG; (GenBank) 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AB3G31_07585 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AB3G31_10740 SDR family NAD(P)-dependent oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AB3G31_19715 fabG; (GenBank) 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AB3G31_11520 fabI; (GenBank) enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D AB3G31_04450 acpP; (GenBank) acyl carrier protein K02078 acpP; acyl carrier protein
D AB3G31_07360 acyl carrier protein K02078 acpP; acyl carrier protein
D AB3G31_19765 phosphopantetheine-binding protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:rhof00999]
D AB3G31_03285 metK; (GenBank) methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D AB3G31_02780 aroE; (GenBank) shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D AB3G31_14100 aroE; (GenBank) shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D AB3G31_00290 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D AB3G31_04925 glycoside hydrolase family 3 N-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D AB3G31_14040 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D AB3G31_20750 glycoside hydrolase family 3 N-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D AB3G31_07000 GH1 family beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:rhof00362]
D AB3G31_14815 benA; (GenBank) benzoate 1,2-dioxygenase large subunit K05549 benA-xylX; benzoate/toluate 1,2-dioxygenase subunit alpha [EC:1.14.12.10 1.14.12.-]
D AB3G31_14820 benB; (GenBank) benzoate 1,2-dioxygenase small subunit K05550 benB-xylY; benzoate/toluate 1,2-dioxygenase subunit beta [EC:1.14.12.10 1.14.12.-]
D AB3G31_14825 benC; (GenBank) benzoate 1,2-dioxygenase electron transfer component BenC K05784 benC-xylZ; benzoate/toluate 1,2-dioxygenase reductase component [EC:1.18.1.-]
D AB3G31_14830 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase K05783 benD-xylL; dihydroxycyclohexadiene carboxylate dehydrogenase [EC:1.3.1.25 1.3.1.-]
D AB3G31_14800 catechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1]
D AB3G31_14790 muconate cycloisomerase family protein K01856 catB; muconate cycloisomerase [EC:5.5.1.1]
D AB3G31_14795 catC; (GenBank) muconolactone Delta-isomerase K03464 catC; muconolactone D-isomerase [EC:5.3.3.4]
D AB3G31_14780 alpha/beta fold hydrolase K01055 pcaD; 3-oxoadipate enol-lactonase [EC:3.1.1.24]
D AB3G31_14850 3-oxoacid CoA-transferase subunit A K01031 pcaI; 3-oxoadipate CoA-transferase, alpha subunit [EC:2.8.3.6]
D AB3G31_14855 3-oxoacid CoA-transferase subunit B K01032 pcaJ; 3-oxoadipate CoA-transferase, beta subunit [EC:2.8.3.6]
D AB3G31_02020 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D AB3G31_12085 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D AB3G31_14860 pcaF; (GenBank) 3-oxoadipyl-CoA thiolase K07823 pcaF; 3-oxoadipyl-CoA thiolase [EC:2.3.1.174]
D AB3G31_03220 intradiol ring-cleavage dioxygenase K04098 chqB; hydroxyquinol 1,2-dioxygenase [EC:1.13.11.37]
D AB3G31_03235 maleylacetate reductase K00217 E1.3.1.32; maleylacetate reductase [EC:1.3.1.32]
D AB3G31_11005 pcaB; (GenBank) 3-carboxy-cis,cis-muconate cycloisomerase K01857 pcaB; 3-carboxy-cis,cis-muconate cycloisomerase [EC:5.5.1.2]
D AB3G31_17500 pcaC; (GenBank) 4-carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D AB3G31_09655 ligA; (GenBank) protocatechuate 4,5-dioxygenase subunit alpha K04100 ligA; protocatechuate 4,5-dioxygenase, alpha chain [EC:1.13.11.8]
D AB3G31_09750 protocatechuate 4,5-dioxygenase subunit alpha K04100 ligA; protocatechuate 4,5-dioxygenase, alpha chain [EC:1.13.11.8]
D AB3G31_09660 class III extradiol dioxygenase subunit beta K04101 ligB; protocatechuate 4,5-dioxygenase, beta chain [EC:1.13.11.8]
D AB3G31_09755 class III extradiol dioxygenase family protein K04101 ligB; protocatechuate 4,5-dioxygenase, beta chain [EC:1.13.11.8]
D AB3G31_09665 Gfo/Idh/MocA family oxidoreductase K10219 ligC; 2-hydroxy-4-carboxymuconate semialdehyde hemiacetal dehydrogenase [EC:1.1.1.312]
D AB3G31_09650 amidohydrolase family protein K10221 ligI; 2-pyrone-4,6-dicarboxylate lactonase [EC:3.1.1.57]
D AB3G31_09640 amidohydrolase family protein K10220 ligJ; 4-oxalmesaconate hydratase [EC:4.2.1.83]
D AB3G31_09645 ligK; (GenBank) 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17]
D AB3G31_07020 FAD-dependent oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D AB3G31_11125 fdx; (GenBank) ISC system 2Fe-2S type ferredoxin K04755 fdx; ferredoxin, 2Fe-2S
D AB3G31_12465 pobA; (GenBank) 4-hydroxybenzoate 3-monooxygenase K00481 pobA; p-hydroxybenzoate 3-monooxygenase [EC:1.14.13.2]
D AB3G31_10465 FAD-binding monooxygenase K19065 mobA; 3-hydroxybenzoate 4-monooxygenase [EC:1.14.13.23]
D AB3G31_02010 3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase family protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D AB3G31_12090 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D AB3G31_15560 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D AB3G31_18415 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D AB3G31_21430 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D AB3G31_05740 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AB3G31_13825 bktB; (GenBank) beta-ketothiolase BktB K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AB3G31_17595 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AB3G31_19020 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation [PATH:rhof00627]
D AB3G31_11490 Nit6803 family nitrilase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D AB3G31_22000 aldehyde dehydrogenase K00141 xylC; benzaldehyde dehydrogenase (NAD) [EC:1.2.1.28]
D AB3G31_09145 aromatic ring-hydroxylating dioxygenase subunit alpha K03862 vanA; vanillate monooxygenase [EC:1.14.13.82]
D AB3G31_09150 PDR/VanB family oxidoreductase K03863 vanB; vanillate monooxygenase ferredoxin subunit
D AB3G31_09655 ligA; (GenBank) protocatechuate 4,5-dioxygenase subunit alpha K04100 ligA; protocatechuate 4,5-dioxygenase, alpha chain [EC:1.13.11.8]
D AB3G31_09750 protocatechuate 4,5-dioxygenase subunit alpha K04100 ligA; protocatechuate 4,5-dioxygenase, alpha chain [EC:1.13.11.8]
D AB3G31_09660 class III extradiol dioxygenase subunit beta K04101 ligB; protocatechuate 4,5-dioxygenase, beta chain [EC:1.13.11.8]
D AB3G31_09755 class III extradiol dioxygenase family protein K04101 ligB; protocatechuate 4,5-dioxygenase, beta chain [EC:1.13.11.8]
D AB3G31_09665 Gfo/Idh/MocA family oxidoreductase K10219 ligC; 2-hydroxy-4-carboxymuconate semialdehyde hemiacetal dehydrogenase [EC:1.1.1.312]
D AB3G31_09650 amidohydrolase family protein K10221 ligI; 2-pyrone-4,6-dicarboxylate lactonase [EC:3.1.1.57]
D AB3G31_06095 gallate dioxygenase K04099 desB; gallate dioxygenase [EC:1.13.11.57]
D AB3G31_18415 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D AB3G31_16385 glnA; (GenBank) type I glutamate--ammonia ligase K20712 glnA; 3-(hydroxyamino)phenol mutase [EC:5.4.4.3]
C 00364 Fluorobenzoate degradation [PATH:rhof00364]
D AB3G31_14815 benA; (GenBank) benzoate 1,2-dioxygenase large subunit K05549 benA-xylX; benzoate/toluate 1,2-dioxygenase subunit alpha [EC:1.14.12.10 1.14.12.-]
D AB3G31_14820 benB; (GenBank) benzoate 1,2-dioxygenase small subunit K05550 benB-xylY; benzoate/toluate 1,2-dioxygenase subunit beta [EC:1.14.12.10 1.14.12.-]
D AB3G31_14825 benC; (GenBank) benzoate 1,2-dioxygenase electron transfer component BenC K05784 benC-xylZ; benzoate/toluate 1,2-dioxygenase reductase component [EC:1.18.1.-]
D AB3G31_14830 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase K05783 benD-xylL; dihydroxycyclohexadiene carboxylate dehydrogenase [EC:1.3.1.25 1.3.1.-]
D AB3G31_14800 catechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1]
D AB3G31_01110 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D AB3G31_02040 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D AB3G31_08735 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D AB3G31_14790 muconate cycloisomerase family protein K01856 catB; muconate cycloisomerase [EC:5.5.1.1]
D AB3G31_03235 maleylacetate reductase K00217 E1.3.1.32; maleylacetate reductase [EC:1.3.1.32]
C 00625 Chloroalkane and chloroalkene degradation [PATH:rhof00625]
D AB3G31_03195 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D AB3G31_08905 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D AB3G31_14420 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D AB3G31_21495 fdhA; (GenBank) formaldehyde dehydrogenase, glutathione-independent K00148 fdhA; glutathione-independent formaldehyde dehydrogenase [EC:1.2.1.46]
D AB3G31_04845 PQQ-dependent methanol/ethanol family dehydrogenase K00114 exaA; alcohol dehydrogenase (cytochrome c) [EC:1.1.2.8]
D AB3G31_10095 haloacid dehalogenase type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:rhof00361]
D AB3G31_14800 catechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1]
D AB3G31_01110 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D AB3G31_02040 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D AB3G31_08735 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D AB3G31_03235 maleylacetate reductase K00217 E1.3.1.32; maleylacetate reductase [EC:1.3.1.32]
D AB3G31_03220 intradiol ring-cleavage dioxygenase K04098 chqB; hydroxyquinol 1,2-dioxygenase [EC:1.13.11.37]
D AB3G31_14790 muconate cycloisomerase family protein K01856 catB; muconate cycloisomerase [EC:5.5.1.1]
D AB3G31_10095 haloacid dehalogenase type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00623 Toluene degradation [PATH:rhof00623]
D AB3G31_22000 aldehyde dehydrogenase K00141 xylC; benzaldehyde dehydrogenase (NAD) [EC:1.2.1.28]
D AB3G31_14800 catechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1]
D AB3G31_14790 muconate cycloisomerase family protein K01856 catB; muconate cycloisomerase [EC:5.5.1.1]
D AB3G31_01110 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D AB3G31_02040 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D AB3G31_08735 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D AB3G31_03235 maleylacetate reductase K00217 E1.3.1.32; maleylacetate reductase [EC:1.3.1.32]
C 00622 Xylene degradation [PATH:rhof00622]
D AB3G31_22000 aldehyde dehydrogenase K00141 xylC; benzaldehyde dehydrogenase (NAD) [EC:1.2.1.28]
D AB3G31_14815 benA; (GenBank) benzoate 1,2-dioxygenase large subunit K05549 benA-xylX; benzoate/toluate 1,2-dioxygenase subunit alpha [EC:1.14.12.10 1.14.12.-]
D AB3G31_14820 benB; (GenBank) benzoate 1,2-dioxygenase small subunit K05550 benB-xylY; benzoate/toluate 1,2-dioxygenase subunit beta [EC:1.14.12.10 1.14.12.-]
D AB3G31_14825 benC; (GenBank) benzoate 1,2-dioxygenase electron transfer component BenC K05784 benC-xylZ; benzoate/toluate 1,2-dioxygenase reductase component [EC:1.18.1.-]
D AB3G31_14830 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase K05783 benD-xylL; dihydroxycyclohexadiene carboxylate dehydrogenase [EC:1.3.1.25 1.3.1.-]
D AB3G31_10480
C 00633 Nitrotoluene degradation [PATH:rhof00633]
D AB3G31_03130 alkene reductase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-]
D AB3G31_17090 alkene reductase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-]
C 00642 Ethylbenzene degradation
D AB3G31_02020 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D AB3G31_12085 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation [PATH:rhof00643]
D AB3G31_16615 maiA; (GenBank) maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2]
D AB3G31_16610 fahA; (GenBank) fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
D AB3G31_01285 fumarylacetoacetate hydrolase family protein K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2]
D AB3G31_11490 Nit6803 family nitrilase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D AB3G31_05745 malonate decarboxylase subunit alpha K01026 pct; propionate CoA-transferase [EC:2.8.3.1]
C 00791 Atrazine degradation [PATH:rhof00791]
D AB3G31_19225 AtzE family amidohydrolase K19837 atzE; 1-carboxybiuret hydrolase [EC:3.5.1.131]
D AB3G31_13460 atzF; (GenBank) allophanate hydrolase K01457 atzF; allophanate hydrolase [EC:3.5.1.54]
D AB3G31_19235 atzF; (GenBank) allophanate hydrolase K01457 atzF; allophanate hydrolase [EC:3.5.1.54]
D AB3G31_19190 isochorismatase family cysteine hydrolase K23359 biuH; biuret amidohydrolase [EC:3.5.1.84]
D AB3G31_19200 isochorismatase family cysteine hydrolase K23359 biuH; biuret amidohydrolase [EC:3.5.1.84]
D AB3G31_13465 uca; (GenBank) urea carboxylase K01941 uca; urea carboxylase [EC:6.3.4.6]
D AB3G31_06890 ureC; (GenBank) urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D AB3G31_06895 urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5]
D AB3G31_06905 urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5]
C 00930 Caprolactam degradation [PATH:rhof00930]
D AB3G31_05380 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
D AB3G31_18415 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation [PATH:rhof00626]
D AB3G31_03195 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D AB3G31_08905 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D AB3G31_14420 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation [PATH:rhof00624]
D AB3G31_10465 FAD-binding monooxygenase K19065 mobA; 3-hydroxybenzoate 4-monooxygenase [EC:1.14.13.23]
D AB3G31_09655 ligA; (GenBank) protocatechuate 4,5-dioxygenase subunit alpha K04100 ligA; protocatechuate 4,5-dioxygenase, alpha chain [EC:1.13.11.8]
D AB3G31_09750 protocatechuate 4,5-dioxygenase subunit alpha K04100 ligA; protocatechuate 4,5-dioxygenase, alpha chain [EC:1.13.11.8]
D AB3G31_09660 class III extradiol dioxygenase subunit beta K04101 ligB; protocatechuate 4,5-dioxygenase, beta chain [EC:1.13.11.8]
D AB3G31_09755 class III extradiol dioxygenase family protein K04101 ligB; protocatechuate 4,5-dioxygenase, beta chain [EC:1.13.11.8]
C 00365 Furfural degradation
C 00984 Steroid degradation [PATH:rhof00984]
D AB3G31_02020 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D AB3G31_12085 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:rhof03020]
D AB3G31_02700 rpoC; (GenBank) DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D AB3G31_19900 rpoA; (GenBank) DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D AB3G31_04205 rpoZ; (GenBank) DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:rhof03010]
D AB3G31_02605 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AB3G31_02630 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AB3G31_02620 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AB3G31_02645 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AB3G31_02625 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AB3G31_02650 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AB3G31_05540 rpsA; (GenBank) 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D AB3G31_05145 rpsB; (GenBank) 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D AB3G31_01230 rpsC; (GenBank) 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D AB3G31_19905 rpsD; (GenBank) 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D AB3G31_19940 rpsE; (GenBank) 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D AB3G31_06490 rpsF; (GenBank) 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D AB3G31_01180 rpsG; (GenBank) 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D AB3G31_19955 rpsH; (GenBank) 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D AB3G31_18900 rpsI; (GenBank) 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D AB3G31_01195 rpsJ; (GenBank) 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D AB3G31_19910 rpsK; (GenBank) 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D AB3G31_01175 rpsL; (GenBank) 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D AB3G31_19915 rpsM; (GenBank) 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D AB3G31_19960 rpsN; (GenBank) 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D AB3G31_08540 rpsO; (GenBank) 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D AB3G31_07490 rpsP; (GenBank) 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D AB3G31_01245 rpsQ; (GenBank) 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D AB3G31_06500 rpsR; (GenBank) 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D AB3G31_01220 rpsS; (GenBank) 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D AB3G31_16750 rpsT; (GenBank) 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D AB3G31_07155 rpsU; (GenBank) 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D AB3G31_02720 rplA; (GenBank) 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D AB3G31_01215 rplB; (GenBank) 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D AB3G31_01200 rplC; (GenBank) 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D AB3G31_01205 rplD; (GenBank) 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D AB3G31_19965 rplE; (GenBank) 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D AB3G31_19950 rplF; (GenBank) 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D AB3G31_06505 rplI; (GenBank) 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D AB3G31_02715 rplJ; (GenBank) 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D AB3G31_02725 rplK; (GenBank) 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D AB3G31_02710 rplL; (GenBank) 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D AB3G31_18905 rplM; (GenBank) 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D AB3G31_19975 rplN; (GenBank) 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D AB3G31_19930 rplO; (GenBank) 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D AB3G31_01235 rplP; (GenBank) 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D AB3G31_19895 rplQ; (GenBank) 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D AB3G31_19945 rplR; (GenBank) 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D AB3G31_07505 rplS; (GenBank) 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D AB3G31_08705 rplT; (GenBank) 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D AB3G31_16575 rplU; (GenBank) 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D AB3G31_01225 rplV; (GenBank) 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D AB3G31_01210 rplW; (GenBank) 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D AB3G31_19970 rplX; (GenBank) 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D AB3G31_02975 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25
D AB3G31_16570 rpmA; (GenBank) 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D AB3G31_03850 rpmB; (GenBank) 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D AB3G31_01240 rpmC; (GenBank) 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D AB3G31_19935 rpmD; (GenBank) 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D AB3G31_09945 type B 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D AB3G31_04425 rpmF; (GenBank) 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D AB3G31_03845 rpmG; (GenBank) 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D AB3G31_22170 rpmH; (GenBank) 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D AB3G31_08700 rpmI; (GenBank) 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D AB3G31_19920 rpmJ; (GenBank) 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
C 00970 Aminoacyl-tRNA biosynthesis [PATH:rhof00970]
D AB3G31_02615 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D AB3G31_02640 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D AB3G31_04070 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D AB3G31_04185 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D AB3G31_04190 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D AB3G31_14715 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D AB3G31_18095 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D AB3G31_20885 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D AB3G31_12540 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D AB3G31_12545 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D AB3G31_04080 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D AB3G31_09010 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D AB3G31_02985 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D AB3G31_04075 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D AB3G31_02755 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D AB3G31_09005 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D AB3G31_09015 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D AB3G31_09405 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D AB3G31_15430 tRNA-His K14226 tRNA-His; tRNA His
D AB3G31_02610 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D AB3G31_02635 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D AB3G31_05110 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AB3G31_05115 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AB3G31_07265 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AB3G31_08565 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AB3G31_09020 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AB3G31_16150 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AB3G31_08325 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D AB3G31_13280 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D AB3G31_03040 tRNA-Ile K14230 tRNA-Met; tRNA Met
D AB3G31_03125 tRNA-Ile K14230 tRNA-Met; tRNA Met
D AB3G31_18420 tRNA-Met K14230 tRNA-Met; tRNA Met
D AB3G31_19890 tRNA-Met K14230 tRNA-Met; tRNA Met
D AB3G31_02670 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D AB3G31_08730 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D AB3G31_12430 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D AB3G31_16585 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D AB3G31_06525 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D AB3G31_06855 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D AB3G31_07565 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D AB3G31_10400 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D AB3G31_02750 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D AB3G31_03950 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D AB3G31_04295 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D AB3G31_02740 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D AB3G31_02760 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D AB3G31_05095 tRNA-Val K14237 tRNA-Val; tRNA Val
D AB3G31_11135 tRNA-Val K14237 tRNA-Val; tRNA Val
D AB3G31_15440 tRNA-Val K14237 tRNA-Val; tRNA Val
D AB3G31_04065 gltX; (GenBank) glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D AB3G31_00985 gatA; (GenBank) Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D AB3G31_05140 amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D AB3G31_00980 gatB; (GenBank) Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D AB3G31_00990 gatC; (GenBank) Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D AB3G31_05965 glutamine--tRNA ligase/YqeY domain fusion protein K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D AB3G31_09465 alaS; (GenBank) alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D AB3G31_16655 aspS; (GenBank) aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D AB3G31_19090 glyQ; (GenBank) glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D AB3G31_19085 glyS; (GenBank) glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D AB3G31_08690 thrS; (GenBank) threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D AB3G31_06520 serS; (GenBank) serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D AB3G31_09840 cysS; (GenBank) cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D AB3G31_05305 metG; (GenBank) methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D AB3G31_01505 fmt; (GenBank) methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D AB3G31_16130 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D AB3G31_20280 leuS; (GenBank) leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D AB3G31_04895 ileS; (GenBank) isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D AB3G31_04535 lysS; (GenBank) lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D AB3G31_20150 argS; (GenBank) arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D AB3G31_16550 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D AB3G31_09250 hisS; (GenBank) histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D AB3G31_08710 pheS; (GenBank) phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D AB3G31_08715 pheT; (GenBank) phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D AB3G31_18875 tyrS; (GenBank) tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D AB3G31_03820 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes [PATH:rhof03008]
D AB3G31_04500 rnc; (GenBank) ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D AB3G31_07540 orn; (GenBank) oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D AB3G31_01350 PA4780 family RIO1-like protein kinase K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1]
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:rhof03060]
D AB3G31_19925 secY; (GenBank) preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D AB3G31_02735 secE; (GenBank) preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D AB3G31_08560 secG; (GenBank) preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D AB3G31_01470 secD; (GenBank) protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D AB3G31_01475 secF; (GenBank) protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D AB3G31_01465 yajC; (GenBank) preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D AB3G31_22155 yidC; (GenBank) membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D AB3G31_04305 secA; (GenBank) preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D AB3G31_21780 hypothetical protein K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D AB3G31_07745 secB; (GenBank) protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D AB3G31_02905 ffh; (GenBank) signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D AB3G31_10020 ffs; (GenBank) signal recognition particle sRNA small type K01983 ffs; signal recognition particle 4.5S RNA
D AB3G31_18565 ftsY; (GenBank) signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D AB3G31_08850 arsA; (GenBank) arsenical pump-driving ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D AB3G31_04235 tatA; (GenBank) Sec-independent protein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA
D AB3G31_04240 tatB; (GenBank) Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D AB3G31_04245 tatC; (GenBank) twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
D AB3G31_04490 lepB; (GenBank) signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D AB3G31_04890 lspA; (GenBank) signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum [PATH:rhof04141]
D AB3G31_21150 htpG; (GenBank) molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D AB3G31_06105 Hsp20/alpha crystallin family protein K13993 HSP20; HSP20 family protein
D AB3G31_08985 Hsp20/alpha crystallin family protein K13993 HSP20; HSP20 family protein
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:rhof04122]
D AB3G31_11100 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D AB3G31_17650 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D AB3G31_05030 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D AB3G31_16135 sulfurtransferase TusA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D AB3G31_20370 mnmA; (GenBank) tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D AB3G31_05670 molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D AB3G31_13690 moaA; (GenBank) GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D AB3G31_04765 moaD; (GenBank) molybdopterin converting factor subunit 1 K03636 moaD; sulfur-carrier protein
D AB3G31_07720 moeB; (GenBank) molybdopterin-synthase adenylyltransferase MoeB K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D AB3G31_01910 moaC; (GenBank) cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D AB3G31_07100 mog; (GenBank) molybdopterin adenylyltransferase K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D AB3G31_12525 thiS; (GenBank) sulfur carrier protein ThiS K03154 thiS; sulfur carrier protein
C 03050 Proteasome
C 03018 RNA degradation [PATH:rhof03018]
D AB3G31_16555 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D AB3G31_04360 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12]
D AB3G31_13880 eno; (GenBank) phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D AB3G31_08545 pnp; (GenBank) polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D AB3G31_07290 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D AB3G31_11760 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D AB3G31_14930 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D AB3G31_05120 rnr; (GenBank) ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D AB3G31_21915 recQ; (GenBank) DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D AB3G31_09950 rho; (GenBank) transcription termination factor Rho K03628 rho; transcription termination factor Rho
D AB3G31_14410 dnaK; (GenBank) molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D AB3G31_17430 groL; (GenBank) chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D AB3G31_09270 hfq; (GenBank) RNA chaperone Hfq K03666 hfq; host factor-I protein
D AB3G31_11840 ppk1; (GenBank) polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D AB3G31_11085 ppk2; (GenBank) polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D AB3G31_11240 ppk2; (GenBank) polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D AB3G31_07330 pcnB; (GenBank) polynucleotide adenylyltransferase PcnB K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:rhof03030]
D AB3G31_00045 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D AB3G31_06370 exonuclease domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D AB3G31_09710 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D AB3G31_11130 dnaQ; (GenBank) DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D AB3G31_11680 dnaE; (GenBank) DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D AB3G31_10045 dnaX; (GenBank) DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D AB3G31_11985 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D AB3G31_20270 holA; (GenBank) DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D AB3G31_10380 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D AB3G31_00010 dnaN; (GenBank) DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D AB3G31_06510 dnaB; (GenBank) replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D AB3G31_09765 dnaG; (GenBank) DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D AB3G31_20525 ssb; (GenBank) single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D AB3G31_06445 ribonuclease HI family protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D AB3G31_10080 rnhA; (GenBank) ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D AB3G31_05215 rnhB; (GenBank) ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D AB3G31_17165 polA; (GenBank) DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D AB3G31_12335 ligA; (GenBank) NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:rhof03410]
D AB3G31_13940 nth; (GenBank) endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D AB3G31_02765 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D AB3G31_03015 mutY; (GenBank) A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D AB3G31_03005 mutM; (GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D AB3G31_09845 DNA-3-methyladenine glycosylase 2 family protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D AB3G31_11615 Ada metal-binding domain-containing protein K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D AB3G31_11875 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D AB3G31_01730 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D AB3G31_00965 exodeoxyribonuclease III K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2]
D AB3G31_16360 exodeoxyribonuclease III K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2]
D AB3G31_17165 polA; (GenBank) DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D AB3G31_03635 recJ; (GenBank) single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D AB3G31_12335 ligA; (GenBank) NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:rhof03420]
D AB3G31_09780 mfd; (GenBank) transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D AB3G31_19320 uvrA; (GenBank) excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D AB3G31_20535 uvrA; (GenBank) excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D AB3G31_11090 uvrB; (GenBank) excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D AB3G31_15455 uvrC; (GenBank) excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D AB3G31_04975 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D AB3G31_17905 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D AB3G31_17165 polA; (GenBank) DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D AB3G31_12335 ligA; (GenBank) NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:rhof03430]
D AB3G31_15830 mutS; (GenBank) DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D AB3G31_10995 mutL; (GenBank) DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D AB3G31_04975 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D AB3G31_17905 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D AB3G31_10085 sbcB; (GenBank) exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D AB3G31_14645 xseA; (GenBank) exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D AB3G31_05045 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D AB3G31_03635 recJ; (GenBank) single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D AB3G31_20525 ssb; (GenBank) single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D AB3G31_11680 dnaE; (GenBank) DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D AB3G31_00010 dnaN; (GenBank) DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D AB3G31_10045 dnaX; (GenBank) DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D AB3G31_20270 holA; (GenBank) DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D AB3G31_11985 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D AB3G31_00045 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D AB3G31_06370 exonuclease domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D AB3G31_09710 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D AB3G31_11130 dnaQ; (GenBank) DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D AB3G31_10380 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D AB3G31_12335 ligA; (GenBank) NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:rhof03440]
D AB3G31_03635 recJ; (GenBank) single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D AB3G31_20525 ssb; (GenBank) single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D AB3G31_04510 recO; (GenBank) DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D AB3G31_10055 recR; (GenBank) recombination mediator RecR K06187 recR; recombination protein RecR
D AB3G31_01605 recA; (GenBank) recombinase RecA K03553 recA; recombination protein RecA
D AB3G31_17165 polA; (GenBank) DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D AB3G31_18800 ruvA; (GenBank) Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D AB3G31_18785 ruvB; (GenBank) Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D AB3G31_19530 ruvC; (GenBank) crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D AB3G31_01380 recG; (GenBank) ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D AB3G31_11680 dnaE; (GenBank) DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D AB3G31_00010 dnaN; (GenBank) DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D AB3G31_10045 dnaX; (GenBank) DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D AB3G31_20270 holA; (GenBank) DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D AB3G31_11985 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D AB3G31_00045 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D AB3G31_06370 exonuclease domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D AB3G31_09710 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D AB3G31_11130 dnaQ; (GenBank) DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D AB3G31_10380 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D AB3G31_02935 priA; (GenBank) primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D AB3G31_06495 priB; (GenBank) primosomal replication protein N K02686 priB; primosomal replication protein N
C 03450 Non-homologous end-joining [PATH:rhof03450]
D AB3G31_10660 Ku protein K10979 ku; DNA end-binding protein Ku
D AB3G31_10655 ligD; (GenBank) DNA ligase D K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:rhof03250]
D AB3G31_09830 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus and Alphavirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03273 Virion - Lassa virus and SFTS virus
C 03272 Virion - Hepatitis viruses
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:rhof02010]
D AB3G31_10190 sulfate ABC transporter substrate-binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D AB3G31_08750 sulfate ABC transporter substrate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D AB3G31_10195 cysT; (GenBank) sulfate ABC transporter permease subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D AB3G31_10200 cysW; (GenBank) sulfate ABC transporter permease subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D AB3G31_10205 sulfate ABC transporter ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D AB3G31_08965 CmpA/NrtA family ABC transporter substrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D AB3G31_08960 ntrB; (GenBank) nitrate ABC transporter permease K15577 nrtB; nitrate/nitrite transport system permease protein
D AB3G31_08955 ABC transporter ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D AB3G31_12385 tauA; (GenBank) taurine ABC transporter substrate-binding protein K15551 tauA; taurine transport system substrate-binding protein
D AB3G31_12395 ABC transporter permease subunit K15552 tauC; taurine transport system permease protein
D AB3G31_12390 ABC transporter ATP-binding protein K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7]
D AB3G31_08760 sulfonate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D AB3G31_08765 sulfonate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D AB3G31_08800 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D AB3G31_08830 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D AB3G31_10060 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D AB3G31_10140 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D AB3G31_10145 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D AB3G31_08780 ssuC; (GenBank) aliphatic sulfonate ABC transporter permease SsuC K15554 ssuC; sulfonate transport system permease protein
D AB3G31_08825 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein
D AB3G31_08785 ATP-binding cassette domain-containing protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D AB3G31_08820 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D AB3G31_09635 substrate-binding domain-containing protein K02020 modA; molybdate transport system substrate-binding protein
D AB3G31_12045 modA; (GenBank) molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D AB3G31_12050 modB; (GenBank) molybdate ABC transporter permease subunit K02018 modB; molybdate transport system permease protein
D AB3G31_12040 ATP-binding cassette domain-containing protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D AB3G31_00955 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D AB3G31_17475 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D AB3G31_20190 iron ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D AB3G31_00950 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D AB3G31_17470 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D AB3G31_20185 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D AB3G31_00945 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D AB3G31_17465 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D AB3G31_20180 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D AB3G31_10795 thiamine ABC transporter substrate-binding protein K02064 thiB; thiamine transport system substrate-binding protein
D AB3G31_10800 iron ABC transporter permease K02063 thiP; thiamine transport system permease protein
D AB3G31_13390 extracellular solute-binding protein K11073 potF; putrescine transport system substrate-binding protein
D AB3G31_13375 ABC transporter permease subunit K11074 potI; putrescine transport system permease protein
D AB3G31_13380 ABC transporter permease subunit K11075 potH; putrescine transport system permease protein
D AB3G31_13385 potA; (GenBank) polyamine ABC transporter ATP-binding protein K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16]
D AB3G31_16740 choX; (GenBank) choline ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D AB3G31_18185 glycine betaine ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D AB3G31_18255 choline ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D AB3G31_18230 proline/glycine betaine ABC transporter permease K02001 proW; glycine betaine/proline transport system permease protein
D AB3G31_18225 glycine betaine/L-proline ABC transporter ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D AB3G31_00365 ugpC; (GenBank) sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D AB3G31_00485 ugpC; (GenBank) sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D AB3G31_01040 ugpC; (GenBank) sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D AB3G31_05475 ugpC; (GenBank) sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D AB3G31_14755 ugpC; (GenBank) sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D AB3G31_16915 ugpC; (GenBank) sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D AB3G31_18685 ugpC; (GenBank) sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D AB3G31_19280 ugpC; (GenBank) sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D AB3G31_06980 ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D AB3G31_11075 ugpC; (GenBank) sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D AB3G31_16020 ugpC; (GenBank) sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D AB3G31_19480 ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D AB3G31_19500 ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D AB3G31_00350 extracellular solute-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D AB3G31_14740 ABC transporter substrate-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D AB3G31_00355 sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D AB3G31_14745 sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D AB3G31_00360 carbohydrate ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D AB3G31_14750 carbohydrate ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D AB3G31_06400 extracellular solute-binding protein K10188 lacE; lactose/L-arabinose transport system substrate-binding protein
D AB3G31_06405 sugar ABC transporter permease K10189 lacF; lactose/L-arabinose transport system permease protein
D AB3G31_06410 carbohydrate ABC transporter permease K10190 lacG; lactose/L-arabinose transport system permease protein
D AB3G31_06420 ugpC; (GenBank) sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10191 lacK; lactose/L-arabinose transport system ATP-binding protein
D AB3G31_19295 sugar ABC transporter substrate-binding protein K10227 smoE; polyol transport system substrate-binding protein
D AB3G31_19290 sugar ABC transporter permease K10228 smoF; polyol transport system permease protein
D AB3G31_19285 carbohydrate ABC transporter permease K10229 smoG; polyol transport system permease protein
D AB3G31_01025 extracellular solute-binding protein K17241 aguE; alpha-1,4-digalacturonate transport system substrate-binding protein
D AB3G31_01030 sugar ABC transporter permease K17242 aguF; alpha-1,4-digalacturonate transport system permease protein
D AB3G31_01035 carbohydrate ABC transporter permease K17243 aguG; alpha-1,4-digalacturonate transport system permease protein
D AB3G31_01425 ABC transporter substrate-binding protein K10236 thuE; trehalose/maltose transport system substrate-binding protein
D AB3G31_16025 ABC transporter substrate-binding protein K10236 thuE; trehalose/maltose transport system substrate-binding protein
D AB3G31_18700 ABC transporter substrate-binding protein K10236 thuE; trehalose/maltose transport system substrate-binding protein
D AB3G31_16030 sugar ABC transporter permease K10237 thuF; trehalose/maltose transport system permease protein
D AB3G31_18695 sugar ABC transporter permease K10237 thuF; trehalose/maltose transport system permease protein
D AB3G31_16035 carbohydrate ABC transporter permease K10238 thuG; trehalose/maltose transport system permease protein
D AB3G31_18690 carbohydrate ABC transporter permease K10238 thuG; trehalose/maltose transport system permease protein
D AB3G31_06560 chvE; (GenBank) multiple monosaccharide ABC transporter substrate-binding protein K10546 chvE; putative multiple sugar transport system substrate-binding protein
D AB3G31_21000 chvE; (GenBank) multiple monosaccharide ABC transporter substrate-binding protein K10546 chvE; putative multiple sugar transport system substrate-binding protein
D AB3G31_06570 mmsB; (GenBank) multiple monosaccharide ABC transporter permease K10547 gguB; putative multiple sugar transport system permease protein
D AB3G31_06565 mmsA; (GenBank) multiple monosaccharide ABC transporter ATP-binding protein K10548 gguA; putative multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D AB3G31_03470 ABC transporter substrate-binding protein K07323 mlaC; phospholipid transport system substrate-binding protein
D AB3G31_03460 mlaD; (GenBank) outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D AB3G31_18815 MlaD family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D AB3G31_03455 mlaE; (GenBank) lipid asymmetry maintenance ABC transporter permease subunit MlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D AB3G31_18825 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D AB3G31_03475 STAS domain-containing protein K07122 mlaB; phospholipid transport system transporter-binding protein
D AB3G31_03450 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D AB3G31_18820 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D AB3G31_08390 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D AB3G31_18920 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D AB3G31_19215 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D AB3G31_08380 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D AB3G31_18930 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D AB3G31_19210 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D AB3G31_08385 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D AB3G31_18935 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D AB3G31_19205 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D AB3G31_08375 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D AB3G31_18925 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D AB3G31_19195 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D AB3G31_06995 ABC transporter substrate-binding protein K17315 gtsA; glucose/mannose transport system substrate-binding protein
D AB3G31_14735 ABC transporter substrate-binding protein K17315 gtsA; glucose/mannose transport system substrate-binding protein
D AB3G31_19495 ABC transporter substrate-binding protein K17315 gtsA; glucose/mannose transport system substrate-binding protein
D AB3G31_19515 ABC transporter substrate-binding protein K17315 gtsA; glucose/mannose transport system substrate-binding protein
D AB3G31_06990 sugar ABC transporter permease K17316 gtsB; glucose/mannose transport system permease protein
D AB3G31_19490 sugar ABC transporter permease K17316 gtsB; glucose/mannose transport system permease protein
D AB3G31_19510 sugar ABC transporter permease K17316 gtsB; glucose/mannose transport system permease protein
D AB3G31_06985 carbohydrate ABC transporter permease K17317 gtsC; glucose/mannose transport system permease protein
D AB3G31_19485 carbohydrate ABC transporter permease K17317 gtsC; glucose/mannose transport system permease protein
D AB3G31_19505 carbohydrate ABC transporter permease K17317 gtsC; glucose/mannose transport system permease protein
D AB3G31_03150 sugar ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D AB3G31_09575 ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D AB3G31_11220 substrate-binding domain-containing protein K10439 rbsB; ribose transport system substrate-binding protein
D AB3G31_03160 ABC transporter permease K10440 rbsC; ribose transport system permease protein
D AB3G31_03165 ABC transporter permease K10440 rbsC; ribose transport system permease protein
D AB3G31_09580 ABC transporter permease K10440 rbsC; ribose transport system permease protein
D AB3G31_11225 ABC transporter permease K10440 rbsC; ribose transport system permease protein
D AB3G31_03155 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D AB3G31_09585 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D AB3G31_11230 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D AB3G31_06555 ABC transporter substrate-binding protein K23508 ytfQ; galactofuranose transport system substrate-binding protein
D AB3G31_06580 ABC transporter permease K23509 ytfT; galactofuranose transport system permease protein
D AB3G31_06585 yjfF; (GenBank) galactofuranose ABC transporter, permease protein YjfF K23509 ytfT; galactofuranose transport system permease protein
D AB3G31_06575 sugar ABC transporter ATP-binding protein K10820 ytfR; galactofuranose transport system ATP-binding protein [EC:7.5.2.9]
D AB3G31_01625 sugar ABC transporter substrate-binding protein K10543 xylF; D-xylose transport system substrate-binding protein
D AB3G31_03255 xylF; (GenBank) D-xylose ABC transporter substrate-binding protein K10543 xylF; D-xylose transport system substrate-binding protein
D AB3G31_21755 xylF; (GenBank) D-xylose ABC transporter substrate-binding protein K10543 xylF; D-xylose transport system substrate-binding protein
D AB3G31_01615 sugar ABC transporter permease K10544 xylH; D-xylose transport system permease protein
D AB3G31_03260 ABC transporter permease K10544 xylH; D-xylose transport system permease protein
D AB3G31_21750 ABC transporter permease K10544 xylH; D-xylose transport system permease protein
D AB3G31_01620 ATP-binding cassette domain-containing protein K10545 xylG; D-xylose transport system ATP-binding protein [EC:7.5.2.10]
D AB3G31_03265 ATP-binding cassette domain-containing protein K10545 xylG; D-xylose transport system ATP-binding protein [EC:7.5.2.10]
D AB3G31_21745 ATP-binding cassette domain-containing protein K10545 xylG; D-xylose transport system ATP-binding protein [EC:7.5.2.10]
D AB3G31_08085 sugar ABC transporter substrate-binding protein K10552 frcB; fructose transport system substrate-binding protein
D AB3G31_08080 ABC transporter permease K10553 frcC; fructose transport system permease protein
D AB3G31_08075 ATP-binding cassette domain-containing protein K10554 frcA; fructose transport system ATP-binding protein
D AB3G31_07815 rhaS; (GenBank) rhamnose ABC transporter substrate-binding protein K10559 rhaS; rhamnose transport system substrate-binding protein
D AB3G31_07805 ABC transporter permease K10560 rhaP; rhamnose transport system permease protein
D AB3G31_07800 ABC transporter permease K10561 rhaQ; rhamnose transport system permease protein
D AB3G31_07810 sugar ABC transporter ATP-binding protein K10562 rhaT; rhamnose transport system ATP-binding protein [EC:7.5.2.-]
D AB3G31_00680 sugar ABC transporter substrate-binding protein K17213 K17213; inositol transport system substrate-binding protein
D AB3G31_14900 sugar ABC transporter substrate-binding protein K17213 K17213; inositol transport system substrate-binding protein
D AB3G31_00675 ABC transporter permease K17214 K17214; inositol transport system permease protein
D AB3G31_14890 ABC transporter permease K17214 K17214; inositol transport system permease protein
D AB3G31_00670 sugar ABC transporter ATP-binding protein K17215 K17215; inositol transport system ATP-binding protein
D AB3G31_14895 sugar ABC transporter ATP-binding protein K17215 K17215; inositol transport system ATP-binding protein
D AB3G31_19990 ABC transporter substrate-binding protein K17321 glpV; glycerol transport system substrate-binding protein
D AB3G31_20005 sugar ABC transporter permease K17322 glpP; glycerol transport system permease protein
D AB3G31_20000 carbohydrate ABC transporter permease K17323 glpQ; glycerol transport system permease protein
D AB3G31_20015 ABC transporter ATP-binding protein K17324 glpS; glycerol transport system ATP-binding protein
D AB3G31_20010 ABC transporter ATP-binding protein K17325 glpT; glycerol transport system ATP-binding protein
D AB3G31_17340 ugpB; (GenBank) sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D AB3G31_17345 ugpA; (GenBank) sn-glycerol-3-phosphate ABC transporter permease UgpA K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D AB3G31_17350 ugpE; (GenBank) sn-glycerol-3-phosphate ABC transporter permease UgpE K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D AB3G31_17355 sn-glycerol-3-phosphate import ATP-binding protein UgpC K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D AB3G31_09905 pstS; (GenBank) phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D AB3G31_09910 pstC; (GenBank) phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D AB3G31_09915 pstA; (GenBank) phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D AB3G31_09920 pstB; (GenBank) phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D AB3G31_01805 putative selenate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D AB3G31_01785 phnE; (GenBank) phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein
D AB3G31_01790 ABC transporter permease K02042 phnE; phosphonate transport system permease protein
D AB3G31_01795 ATP-binding cassette domain-containing protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D AB3G31_08225 transporter substrate-binding domain-containing protein K10013 argT; lysine/arginine/ornithine transport system substrate-binding protein
D AB3G31_13550 amino acid ABC transporter substrate-binding protein K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D AB3G31_20640 amino acid ABC transporter substrate-binding protein K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D AB3G31_20630 amino acid ABC transporter permease K10002 gltK; glutamate/aspartate transport system permease protein
D AB3G31_20635 amino acid ABC transporter permease K10003 gltJ; glutamate/aspartate transport system permease protein
D AB3G31_20625 amino acid ABC transporter ATP-binding protein K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D AB3G31_07170 transporter substrate-binding domain-containing protein K02424 tcyA; L-cystine transport system substrate-binding protein
D AB3G31_07175 amino acid ABC transporter permease K10009 tcyB; L-cystine transport system permease protein
D AB3G31_13960 lysine/arginine/ornithine ABC transporter substrate-binding protein K10022 aotJ; arginine/ornithine transport system substrate-binding protein
D AB3G31_13970 ABC transporter permease subunit K10023 aotM; arginine/ornithine transport system permease protein
D AB3G31_13965 ABC transporter permease subunit K10024 aotQ; arginine/ornithine transport system permease protein
D AB3G31_13980 ATP-binding cassette domain-containing protein K10025 aotP; arginine/ornithine transport system ATP-binding protein [EC:7.4.2.1]
D AB3G31_03630 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D AB3G31_08990 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D AB3G31_09120 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D AB3G31_10120 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D AB3G31_10390 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D AB3G31_12375 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D AB3G31_15110 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D AB3G31_15495 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D AB3G31_21865 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D AB3G31_09115 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D AB3G31_10125 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D AB3G31_12110 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D AB3G31_12370 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D AB3G31_15090 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D AB3G31_15365 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D AB3G31_09110 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D AB3G31_10130 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D AB3G31_12105 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D AB3G31_12365 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D AB3G31_15095 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D AB3G31_15360 ABC transporter ATP-binding protein K01998 livM; branched-chain amino acid transport system permease protein
D AB3G31_09105 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D AB3G31_10110 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D AB3G31_12100 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D AB3G31_12360 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D AB3G31_15100 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D AB3G31_15355 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D AB3G31_09100 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D AB3G31_10115 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D AB3G31_12095 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D AB3G31_12355 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D AB3G31_15105 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D AB3G31_15350 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D AB3G31_15225 urtA; (GenBank) urea ABC transporter substrate-binding protein K11959 urtA; urea transport system substrate-binding protein
D AB3G31_15220 urtB; (GenBank) urea ABC transporter permease subunit UrtB K11960 urtB; urea transport system permease protein
D AB3G31_15215 urtC; (GenBank) urea ABC transporter permease subunit UrtC K11961 urtC; urea transport system permease protein
D AB3G31_15210 urtD; (GenBank) urea ABC transporter ATP-binding protein UrtD K11962 urtD; urea transport system ATP-binding protein
D AB3G31_15205 urtE; (GenBank) urea ABC transporter ATP-binding subunit UrtE K11963 urtE; urea transport system ATP-binding protein
D AB3G31_07915 ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein
D AB3G31_07910 ABC transporter permease subunit K12369 dppB; dipeptide transport system permease protein
D AB3G31_07905 ABC transporter permease subunit K12370 dppC; dipeptide transport system permease protein
D AB3G31_07900 oligopeptide/dipeptide ABC transporter ATP-binding protein K12371 dppD; dipeptide transport system ATP-binding protein
D AB3G31_07895 peptide ABC transporter ATP-binding protein K12372 dppF; dipeptide transport system ATP-binding protein
D AB3G31_08515 gsiB; (GenBank) glutathione ABC transporter substrate-binding protein GsiB K13889 gsiB; glutathione transport system substrate-binding protein
D AB3G31_08520 gsiC; (GenBank) glutathione ABC transporter permease GsiC K13890 gsiC; glutathione transport system permease protein
D AB3G31_08525 gsiD; (GenBank) glutathione ABC transporter permease GsiD K13891 gsiD; glutathione transport system permease protein
D AB3G31_08510 dipeptide ABC transporter ATP-binding protein K13892 gsiA; glutathione transport system ATP-binding protein
D AB3G31_11525 extracellular solute-binding protein K13893 yejA; microcin C transport system substrate-binding protein
D AB3G31_11530 ABC transporter permease subunit K13894 yejB; microcin C transport system permease protein
D AB3G31_11535 ABC transporter permease K13895 yejE; microcin C transport system permease protein
D AB3G31_11540 dipeptide ABC transporter ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein
D AB3G31_06845 ABC transporter permease K09690 wzm; homopolymeric O-antigen transport system permease protein
D AB3G31_06840 ABC transporter ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D AB3G31_03750 lipoprotein-releasing ABC transporter permease subunit K09808 lolC_E_F; lipoprotein-releasing system permease protein
D AB3G31_03755 lolD; (GenBank) lipoprotein-releasing ABC transporter ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D AB3G31_10370 lptF; (GenBank) LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein
D AB3G31_10365 lptG; (GenBank) LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein
D AB3G31_20130 lptB; (GenBank) LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D AB3G31_13310 msbA; (GenBank) lipid A export permease/ATP-binding protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D AB3G31_08315 peptidase domain-containing ABC transporter K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
D AB3G31_20670 ABC transporter ATP-binding protein/permease K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
D AB3G31_10875 ABC transporter ATP-binding protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D AB3G31_16250 ATP-binding cassette domain-containing protein K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D AB3G31_16255 cydD; (GenBank) thiol reductant ABC exporter subunit CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D AB3G31_15865 ABC transporter permease K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D AB3G31_21505 MacB family efflux pump subunit K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D AB3G31_17765 ABC transporter ATP-binding protein/permease K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein
C 02060 Phosphotransferase system (PTS) [PATH:rhof02060]
D AB3G31_21065 ptsP; (GenBank) phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D AB3G31_21070 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D AB3G31_21075 PTS fructose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D AB3G31_20315 PTS sugar transporter subunit IIA K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
C 03070 Bacterial secretion system [PATH:rhof03070]
D AB3G31_12270 TolC family outer membrane protein K12340 tolC; outer membrane protein
D AB3G31_08310 HlyD family type I secretion periplasmic adaptor subunit K11003 hlyD; membrane fusion protein, hemolysin D
D AB3G31_08315 peptidase domain-containing ABC transporter K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
D AB3G31_17745 gspD; (GenBank) type II secretion system secretin GspD K02453 gspD; general secretion pathway protein D
D AB3G31_17700 type II secretion system protein N K02452 gspC; general secretion pathway protein C
D AB3G31_17755 gspF; (GenBank) type II secretion system inner membrane protein GspF K02455 gspF; general secretion pathway protein F
D AB3G31_17705 gspG; (GenBank) type II secretion system major pseudopilin GspG K02456 gspG; general secretion pathway protein G
D AB3G31_17710 type II secretion system protein GspH K02457 gspH; general secretion pathway protein H
D AB3G31_17715 gspI; (GenBank) type II secretion system minor pseudopilin GspI K02458 gspI; general secretion pathway protein I
D AB3G31_17720 prepilin-type N-terminal cleavage/methylation domain-containing protein K02459 gspJ; general secretion pathway protein J
D AB3G31_17725 gspK; (GenBank) type II secretion system minor pseudopilin GspK K02460 gspK; general secretion pathway protein K
D AB3G31_17730 gspL; (GenBank) type II secretion system protein GspL K02461 gspL; general secretion pathway protein L
D AB3G31_17735 gspM; (GenBank) type II secretion system protein GspM K02462 gspM; general secretion pathway protein M
D AB3G31_03795 ATPase, T2SS/T4P/T4SS family K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D AB3G31_17750 ATPase, T2SS/T4P/T4SS family K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D AB3G31_01470 secD; (GenBank) protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D AB3G31_01475 secF; (GenBank) protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D AB3G31_02735 secE; (GenBank) preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D AB3G31_08560 secG; (GenBank) preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D AB3G31_19925 secY; (GenBank) preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D AB3G31_01465 yajC; (GenBank) preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D AB3G31_22155 yidC; (GenBank) membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D AB3G31_04305 secA; (GenBank) preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D AB3G31_21780 hypothetical protein K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D AB3G31_18565 ftsY; (GenBank) signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D AB3G31_07745 secB; (GenBank) protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D AB3G31_02905 ffh; (GenBank) signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D AB3G31_04235 tatA; (GenBank) Sec-independent protein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA
D AB3G31_04240 tatB; (GenBank) Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D AB3G31_04245 tatC; (GenBank) twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
D AB3G31_16190 type IV secretion system protein K03201 virB6; type IV secretion system protein VirB6
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:rhof02020]
D AB3G31_09935 phoR; (GenBank) phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D AB3G31_09930 phoB; (GenBank) phosphate regulon transcriptional regulator PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D AB3G31_08350 alkaline phosphatase D family protein K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D AB3G31_09905 pstS; (GenBank) phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D AB3G31_09795 ATP-binding protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D AB3G31_09800 ompR; (GenBank) two-component system response regulator OmpR K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D AB3G31_04480 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107]
D AB3G31_16425 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107]
D AB3G31_07075 creC; (GenBank) two-component system sensor histidine kinase CreC K07641 creC; two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3]
D AB3G31_07080 creB; (GenBank) two-component system response regulator CreB K07663 creB; two-component system, OmpR family, catabolic regulation response regulator CreB
D AB3G31_09690 efflux RND transporter periplasmic adaptor subunit K07799 mdtA; membrane fusion protein, multidrug efflux system
D AB3G31_09695 efflux RND transporter permease subunit K07788 mdtB; multidrug efflux pump
D AB3G31_00815 ATP-binding protein K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D AB3G31_00810 response regulator K07666 qseB; two-component system, OmpR family, response regulator QseB
D AB3G31_07755 flhD; (GenBank) flagellar transcriptional regulator FlhD K02403 flhD; flagellar transcriptional activator FlhD
D AB3G31_07760 flhC; (GenBank) flagellar transcriptional regulator FlhC K02402 flhC; flagellar transcriptional activator FlhC
D AB3G31_02460 flagellin K02406 fliC; flagellin
D AB3G31_02465 flagellin K02406 fliC; flagellin
D AB3G31_02375 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
D AB3G31_02415 motA; (GenBank) flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D AB3G31_21295 DUF4118 domain-containing protein K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D AB3G31_21290 kdpE; (GenBank) two-component system response regulator KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D AB3G31_21310 kdpA; (GenBank) potassium-transporting ATPase subunit KdpA K01546 kdpA; potassium-transporting ATPase potassium-binding subunit
D AB3G31_21305 kdpB; (GenBank) potassium-transporting ATPase subunit KdpB K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6]
D AB3G31_21300 kdpC; (GenBank) potassium-transporting ATPase subunit KdpC K01548 kdpC; potassium-transporting ATPase KdpC subunit
D AB3G31_13615 sensor histidine kinase N-terminal domain-containing protein K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D AB3G31_13610 response regulator transcription factor K07774 tctD; two-component system, OmpR family, response regulator TctD
D AB3G31_03805 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D AB3G31_13595 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D AB3G31_03800 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein
D AB3G31_13600 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein
D AB3G31_02030 tripartite tricarboxylate transporter substrate-binding protein K07795 tctC; putative tricarboxylic transport membrane protein
D AB3G31_05810 tripartite tricarboxylate transporter substrate binding protein K07795 tctC; putative tricarboxylic transport membrane protein
D AB3G31_13605 tripartite tricarboxylate transporter substrate-binding protein K07795 tctC; putative tricarboxylic transport membrane protein
D AB3G31_17965 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D AB3G31_00005 dnaA; (GenBank) chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D AB3G31_07350 MBOAT family O-acyltransferase K03739 dltB; membrane protein involved in D-alanine export
D AB3G31_12305 ddpX; (GenBank) D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D AB3G31_04695 aldolase/citrate lyase family protein K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D AB3G31_11010 CoA ester lyase K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D AB3G31_03565 histidine kinase K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3]
D AB3G31_03570 LytTR family DNA-binding domain-containing protein K08083 algR; two-component system, LytTR family, response regulator AlgR
D AB3G31_02555 response regulator transcription factor K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D AB3G31_04805 response regulator transcription factor K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D AB3G31_01540 fatty acid desaturase K10255 FAD6; acyl-lipid omega-6 desaturase (Delta-12 desaturase) [EC:1.14.19.23 1.14.19.45]
D AB3G31_12420 [protein-PII] uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D AB3G31_13090 P-II family nitrogen regulator K04751 glnB; nitrogen regulatory protein P-II 1
D AB3G31_16375 glnL; (GenBank) nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D AB3G31_16370 ntrC; (GenBank) nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D AB3G31_00410 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D AB3G31_13400 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D AB3G31_02680 ATP-binding protein K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D AB3G31_02675 response regulator K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D AB3G31_05740 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AB3G31_13825 bktB; (GenBank) beta-ketothiolase BktB K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AB3G31_17595 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AB3G31_19020 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AB3G31_08135 dicarboxylate/amino acid:cation symporter K11103 dctA; aerobic C4-dicarboxylate transport protein
D AB3G31_11000 dctA; (GenBank) C4-dicarboxylate transporter DctA K11103 dctA; aerobic C4-dicarboxylate transport protein
D AB3G31_02890 HAMP domain-containing sensor histidine kinase K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D AB3G31_02885 sigma-54 dependent transcriptional regulator K02667 pilR; two-component system, NtrC family, response regulator PilR
D AB3G31_20125 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D AB3G31_01930 pilin K02650 pilA; type IV pilus assembly protein PilA
D AB3G31_10270 ATP-binding protein K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
D AB3G31_10260 sigma 54-interacting transcriptional regulator K07715 glrR; two-component system, NtrC family, response regulator GlrR
D AB3G31_02585 CheR family methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D AB3G31_16310 chemotaxis protein CheB K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D AB3G31_01570 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AB3G31_02910 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AB3G31_02915 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AB3G31_03615 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AB3G31_03980 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AB3G31_06920 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AB3G31_09135 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AB3G31_09480 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AB3G31_10935 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AB3G31_11675 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AB3G31_11925 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AB3G31_12405 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AB3G31_13920 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AB3G31_14055 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AB3G31_14350 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AB3G31_14880 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AB3G31_15835 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AB3G31_17335 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AB3G31_20560 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AB3G31_20715 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AB3G31_11155 methyl-accepting chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D AB3G31_17290 methyl-accepting chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D AB3G31_12165 methyl-accepting chemotaxis protein K05875 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor
D AB3G31_12400 methyl-accepting chemotaxis protein K05875 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor
D AB3G31_01080 methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor
D AB3G31_02920 methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor
D AB3G31_15995 methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor
D AB3G31_02580 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D AB3G31_06925 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D AB3G31_10930 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D AB3G31_14875 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D AB3G31_02575 chemotaxis protein CheW K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D AB3G31_02405 cheY; (GenBank) chemotaxis response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D AB3G31_02570 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D AB3G31_08940 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D AB3G31_02595 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D AB3G31_20685 chemotaxis protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D AB3G31_18290 methyl-accepting chemotaxis protein K02660 pilJ; twitching motility protein PilJ
D AB3G31_18295 chemotaxis protein CheW K02659 pilI; twitching motility protein PilI
D AB3G31_18285 Hpt domain-containing protein K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D AB3G31_18305 response regulator K02657 pilG; twitching motility two-component system response regulator PilG
D AB3G31_18300 response regulator K02658 pilH; twitching motility two-component system response regulator PilH
D AB3G31_15910 response regulator K11443 divK; two-component system, cell cycle response regulator DivK
D AB3G31_19005 PAS domain S-box protein K11711 dctS; two-component system, LuxR family, sensor histidine kinase DctS [EC:2.7.13.3]
D AB3G31_21590 PAS domain S-box protein K11711 dctS; two-component system, LuxR family, sensor histidine kinase DctS [EC:2.7.13.3]
D AB3G31_19010 response regulator K11712 dctR; two-component system, LuxR family, response regulator DctR
D AB3G31_21585 response regulator K11712 dctR; two-component system, LuxR family, response regulator DctR
D AB3G31_05060 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D AB3G31_05825 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D AB3G31_05985 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D AB3G31_07115 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D AB3G31_09420 sialic acid TRAP transporter substrate-binding protein SiaP K11688 dctP; TRAP-type transport system periplasmic protein
D AB3G31_10600 DctP family TRAP transporter solute-binding subunit K11688 dctP; TRAP-type transport system periplasmic protein
D AB3G31_13350 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D AB3G31_14115 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D AB3G31_19000 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D AB3G31_05075 TRAP transporter small permease subunit K11689 dctQ; TRAP-type transport system small permease protein
D AB3G31_05820 TRAP transporter small permease K11689 dctQ; TRAP-type transport system small permease protein
D AB3G31_05980 TRAP transporter small permease subunit K11689 dctQ; TRAP-type transport system small permease protein
D AB3G31_07125 TRAP transporter small permease subunit K11689 dctQ; TRAP-type transport system small permease protein
D AB3G31_09415 TRAP transporter small permease K11689 dctQ; TRAP-type transport system small permease protein
D AB3G31_10590 TRAP transporter small permease K11689 dctQ; TRAP-type transport system small permease protein
D AB3G31_14105 TRAP transporter small permease K11689 dctQ; TRAP-type transport system small permease protein
D AB3G31_18995 TRAP transporter small permease K11689 dctQ; TRAP-type transport system small permease protein
D AB3G31_05070 TRAP transporter large permease subunit K11690 dctM; TRAP-type transport system large permease protein
D AB3G31_05815 TRAP transporter large permease K11690 dctM; TRAP-type transport system large permease protein
D AB3G31_05975 TRAP transporter large permease subunit K11690 dctM; TRAP-type transport system large permease protein
D AB3G31_07120 TRAP transporter large permease subunit K11690 dctM; TRAP-type transport system large permease protein
D AB3G31_09410 TRAP transporter large permease K11690 dctM; TRAP-type transport system large permease protein
D AB3G31_10595 TRAP transporter large permease K11690 dctM; TRAP-type transport system large permease protein
D AB3G31_14110 TRAP transporter large permease subunit K11690 dctM; TRAP-type transport system large permease protein
D AB3G31_18990 TRAP transporter large permease subunit K11690 dctM; TRAP-type transport system large permease protein
D AB3G31_20625 amino acid ABC transporter ATP-binding protein K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D AB3G31_20630 amino acid ABC transporter permease K10002 gltK; glutamate/aspartate transport system permease protein
D AB3G31_20635 amino acid ABC transporter permease K10003 gltJ; glutamate/aspartate transport system permease protein
D AB3G31_13550 amino acid ABC transporter substrate-binding protein K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D AB3G31_20640 amino acid ABC transporter substrate-binding protein K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D AB3G31_19100 type II asparaginase K05597 aspQ; glutamin-(asparagin-)ase [EC:3.5.1.38]
D AB3G31_01130 HD domain-containing phosphohydrolase K13815 rpfG; two-component system, response regulator RpfG
D AB3G31_14705 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D AB3G31_15390 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D AB3G31_18615 cyclic nucleotide-binding domain-containing protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D AB3G31_20845 cyclic nucleotide-binding domain-containing protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D AB3G31_21720 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D AB3G31_13215 ATP-binding protein K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D AB3G31_13220 response regulator transcription factor K15012 regA; two-component system, response regulator RegA
D AB3G31_04270 petA; (GenBank) ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D AB3G31_04275 cytochrome bc complex cytochrome b subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D AB3G31_04280 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D AB3G31_04850 c-type cytochrome K08738 CYC; cytochrome c
D AB3G31_14285 c-type cytochrome K08738 CYC; cytochrome c
D AB3G31_18345 c-type cytochrome K08738 CYC; cytochrome c
D AB3G31_02225 ccoN; (GenBank) cytochrome-c oxidase, cbb3-type subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D AB3G31_02220 ccoO; (GenBank) cytochrome-c oxidase, cbb3-type subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D AB3G31_02215 cbb3-type cytochrome c oxidase subunit 3 K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D AB3G31_02210 ccoP; (GenBank) cytochrome-c oxidase, cbb3-type subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D AB3G31_16245 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D AB3G31_16240 cydB; (GenBank) cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D AB3G31_16235 cydX; (GenBank) cytochrome bd-I oxidase subunit CydX K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7]
D AB3G31_12270 TolC family outer membrane protein K12340 tolC; outer membrane protein
D AB3G31_20095 class I SAM-dependent methyltransferase K19620 phcB; extracellular factor (EF) 3-hydroxypalmitic acid methyl ester biosynthesis protein
D AB3G31_20090 ATP-binding protein K19621 phcS; two-component system, sensor histidine kinase PhcS [EC:2.7.13.3]
D AB3G31_20085 hybrid sensor histidine kinase/response regulator K19622 phcR; two-component system, response regulator PhcR
D AB3G31_07455 epsE; (GenBank) polysaccharide export protein EpsE K01991 wza; polysaccharide biosynthesis/export protein
D AB3G31_17065 XrtA/PEP-CTERM system exopolysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D AB3G31_05915 low molecular weight protein-tyrosine-phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D AB3G31_17895 low molecular weight protein-tyrosine-phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D AB3G31_17040 wecB; (GenBank) UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D AB3G31_21840 wecB; (GenBank) UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D AB3G31_02365 flgM; (GenBank) flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D AB3G31_04800
D AB3G31_11580
D AB3G31_12085 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D AB3G31_21880
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04082 Neuroactive ligand signaling
C 04081 Hormone signaling
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome [PATH:rhof04146]
D AB3G31_06655 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D AB3G31_19180 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D AB3G31_20345 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D AB3G31_07995 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D AB3G31_14630 icd; (GenBank) NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D AB3G31_08455 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D AB3G31_20170 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D AB3G31_06165 catalase K03781 katE; catalase [EC:1.11.1.6]
D AB3G31_02055 superoxide dismutase family protein K04565 SOD1; superoxide dismutase, Cu-Zn family [EC:1.15.1.1]
D AB3G31_14640 Fe-Mn family superoxide dismutase K04564 SOD2; superoxide dismutase, Fe-Mn family [EC:1.15.1.1]
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis [PATH:rhof04148]
D AB3G31_20795 rocF; (GenBank) arginase K01476 rocF; arginase [EC:3.5.3.1]
D AB3G31_04270 petA; (GenBank) ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:rhof02024]
D AB3G31_09270 hfq; (GenBank) RNA chaperone Hfq K03666 hfq; host factor-I protein
D AB3G31_20690 trpE; (GenBank) anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D AB3G31_20700 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D AB3G31_02815 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D AB3G31_00815 ATP-binding protein K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D AB3G31_00810 response regulator K07666 qseB; two-component system, OmpR family, response regulator QseB
D AB3G31_10270 ATP-binding protein K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
D AB3G31_10260 sigma 54-interacting transcriptional regulator K07715 glrR; two-component system, NtrC family, response regulator GlrR
D AB3G31_07755 flhD; (GenBank) flagellar transcriptional regulator FlhD K02403 flhD; flagellar transcriptional activator FlhD
D AB3G31_07760 flhC; (GenBank) flagellar transcriptional regulator FlhC K02402 flhC; flagellar transcriptional activator FlhC
D AB3G31_21290 kdpE; (GenBank) two-component system response regulator KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D AB3G31_06430 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D AB3G31_00510 extracellular solute-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D AB3G31_09455 ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D AB3G31_10635 extracellular solute-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D AB3G31_16850 ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D AB3G31_18450 extracellular solute-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D AB3G31_00500 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D AB3G31_09440 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D AB3G31_16840 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D AB3G31_18440 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D AB3G31_00505 ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D AB3G31_09445 ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D AB3G31_16845 ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D AB3G31_18445 ABC transporter permease subunit K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D AB3G31_00515 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D AB3G31_09450 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D AB3G31_10805 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D AB3G31_16855 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D AB3G31_18435 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D AB3G31_03630 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D AB3G31_08990 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D AB3G31_09120 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D AB3G31_10120 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D AB3G31_10390 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D AB3G31_12375 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D AB3G31_15110 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D AB3G31_15495 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D AB3G31_21865 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D AB3G31_09115 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D AB3G31_10125 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D AB3G31_12110 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D AB3G31_12370 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D AB3G31_15090 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D AB3G31_15365 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D AB3G31_09110 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D AB3G31_10130 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D AB3G31_12105 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D AB3G31_12365 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D AB3G31_15095 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D AB3G31_15360 ABC transporter ATP-binding protein K01998 livM; branched-chain amino acid transport system permease protein
D AB3G31_09105 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D AB3G31_10110 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D AB3G31_12100 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D AB3G31_12360 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D AB3G31_15100 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D AB3G31_15355 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D AB3G31_09100 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D AB3G31_10115 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D AB3G31_12095 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D AB3G31_12355 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D AB3G31_15105 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D AB3G31_15350 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D AB3G31_06655 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D AB3G31_19180 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D AB3G31_20345 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D AB3G31_01130 HD domain-containing phosphohydrolase K13815 rpfG; two-component system, response regulator RpfG
D AB3G31_14705 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D AB3G31_15390 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D AB3G31_18615 cyclic nucleotide-binding domain-containing protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D AB3G31_20845 cyclic nucleotide-binding domain-containing protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D AB3G31_16480 ribD; (GenBank) bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D AB3G31_08275 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D AB3G31_08675 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D AB3G31_16270 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D AB3G31_21510 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D AB3G31_12300 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D AB3G31_21180 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D AB3G31_21555 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D AB3G31_12295 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D AB3G31_21175 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D AB3G31_21550 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D AB3G31_12290 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D AB3G31_21170 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D AB3G31_21545 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D AB3G31_12285 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D AB3G31_21165 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D AB3G31_21540 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D AB3G31_12280 ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D AB3G31_21535 ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D AB3G31_22155 yidC; (GenBank) membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D AB3G31_02735 secE; (GenBank) preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D AB3G31_08560 secG; (GenBank) preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D AB3G31_19925 secY; (GenBank) preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D AB3G31_01465 yajC; (GenBank) preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D AB3G31_04305 secA; (GenBank) preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D AB3G31_21780 hypothetical protein K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D AB3G31_18565 ftsY; (GenBank) signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D AB3G31_07745 secB; (GenBank) protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D AB3G31_02905 ffh; (GenBank) signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D AB3G31_13995 phosphocholine-specific phospholipase C K01114 plc; phospholipase C [EC:3.1.4.3]
D AB3G31_21880
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:rhof02030]
D AB3G31_01570 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AB3G31_02910 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AB3G31_02915 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AB3G31_03615 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AB3G31_03980 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AB3G31_06920 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AB3G31_09135 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AB3G31_09480 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AB3G31_10935 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AB3G31_11675 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AB3G31_11925 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AB3G31_12405 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AB3G31_13920 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AB3G31_14055 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AB3G31_14350 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AB3G31_14880 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AB3G31_15835 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AB3G31_17335 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AB3G31_20560 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AB3G31_20715 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AB3G31_11155 methyl-accepting chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D AB3G31_17290 methyl-accepting chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D AB3G31_12165 methyl-accepting chemotaxis protein K05875 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor
D AB3G31_12400 methyl-accepting chemotaxis protein K05875 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor
D AB3G31_01080 methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor
D AB3G31_02920 methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor
D AB3G31_15995 methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor
D AB3G31_03150 sugar ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D AB3G31_09575 ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D AB3G31_11220 substrate-binding domain-containing protein K10439 rbsB; ribose transport system substrate-binding protein
D AB3G31_07915 ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein
D AB3G31_02575 chemotaxis protein CheW K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D AB3G31_02580 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D AB3G31_06925 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D AB3G31_10930 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D AB3G31_14875 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D AB3G31_02405 cheY; (GenBank) chemotaxis response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D AB3G31_02570 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D AB3G31_08940 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D AB3G31_11385 chemotaxis protein CheC K03410 cheC; chemotaxis protein CheC
D AB3G31_02400 protein phosphatase CheZ K03414 cheZ; chemotaxis protein CheZ
D AB3G31_02595 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D AB3G31_16310 chemotaxis protein CheB K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D AB3G31_20685 chemotaxis protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D AB3G31_02590 cheD; (GenBank) chemoreceptor glutamine deamidase CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D AB3G31_02585 CheR family methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D AB3G31_02495 fliG; (GenBank) flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D AB3G31_02525 fliM; (GenBank) flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D AB3G31_02530 fliN; (GenBank) flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D AB3G31_02415 motA; (GenBank) flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D AB3G31_02410 motB; (GenBank) flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D AB3G31_10915
C 02040 Flagellar assembly [PATH:rhof02040]
D AB3G31_02485 fliE; (GenBank) flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D AB3G31_02490 fliF; (GenBank) flagellar basal-body MS-ring/collar protein FliF K02409 fliF; flagellar M-ring protein FliF
D AB3G31_02495 fliG; (GenBank) flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D AB3G31_02500 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D AB3G31_02505 fliI; (GenBank) flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D AB3G31_02510 fliJ; (GenBank) flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ
D AB3G31_02515 flagellar hook-length control protein FliK K02414 fliK; flagellar hook-length control protein FliK
D AB3G31_02520 flagellar basal body-associated FliL family protein K02415 fliL; flagellar protein FliL
D AB3G31_02525 fliM; (GenBank) flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D AB3G31_02530 fliN; (GenBank) flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D AB3G31_02535 flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D AB3G31_02540 fliP; (GenBank) flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D AB3G31_02545 fliQ; (GenBank) flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D AB3G31_02550 fliR; (GenBank) flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D AB3G31_02390 flhA; (GenBank) flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D AB3G31_02395 EscU/YscU/HrcU family type III secretion system export apparatus switch protein K02401 flhB; flagellar biosynthesis protein FlhB
D AB3G31_02360 flgA; (GenBank) flagellar basal body P-ring formation chaperone FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D AB3G31_02355 flgB; (GenBank) flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D AB3G31_02350 flgC; (GenBank) flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D AB3G31_02345 flagellar hook capping FlgD N-terminal domain-containing protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D AB3G31_02340 flgE; (GenBank) flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D AB3G31_02335 flagellar basal body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D AB3G31_02330 flgG; (GenBank) flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D AB3G31_02325 flagellar basal body L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D AB3G31_21985 flagellar basal body L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D AB3G31_02320 flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D AB3G31_02315 glucosaminidase domain-containing protein K02395 flgJ; peptidoglycan hydrolase FlgJ
D AB3G31_02310 flgK; (GenBank) flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D AB3G31_02305 flgL; (GenBank) flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D AB3G31_02460 flagellin K02406 fliC; flagellin
D AB3G31_02465 flagellin K02406 fliC; flagellin
D AB3G31_02470 fliD; (GenBank) flagellar filament capping protein FliD K02407 fliD; flagellar hook-associated protein 2
D AB3G31_02475 fliS; (GenBank) flagellar export chaperone FliS K02422 fliS; flagellar secretion chaperone FliS
D AB3G31_02480 flagellar protein FliT K02423 fliT; flagellar protein FliT
D AB3G31_02415 motA; (GenBank) flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D AB3G31_02410 motB; (GenBank) flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D AB3G31_02365 flgM; (GenBank) flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D AB3G31_07170 transporter substrate-binding domain-containing protein K02424 tcyA; L-cystine transport system substrate-binding protein
D AB3G31_09760 rpoD; (GenBank) RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D AB3G31_07755 flhD; (GenBank) flagellar transcriptional regulator FlhD K02403 flhD; flagellar transcriptional activator FlhD
D AB3G31_07760 flhC; (GenBank) flagellar transcriptional regulator FlhC K02402 flhC; flagellar transcriptional activator FlhC
D AB3G31_20125 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D AB3G31_02375 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D AB3G31_13880 eno; (GenBank) phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04981 Folate transport and metabolism [PATH:rhof04981]
D AB3G31_18660 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
D AB3G31_06725 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D AB3G31_16435 glyA; (GenBank) serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D AB3G31_18175 glyA; (GenBank) serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D AB3G31_06730 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D AB3G31_09615 mmuM; (GenBank) homocysteine S-methyltransferase K00547 mmuM; homocysteine S-methyltransferase [EC:2.1.1.10]
D AB3G31_21875 metH; (GenBank) methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D AB3G31_21900 homocysteine S-methyltransferase family protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04980 Cobalamin transport and metabolism [PATH:rhof04980]
D AB3G31_00640 cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D AB3G31_13770 meaB; (GenBank) methylmalonyl Co-A mutase-associated GTPase MeaB K07588 MMAA; GTPase [EC:3.6.5.-]
D AB3G31_13775 scpA; (GenBank) methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D AB3G31_21875 metH; (GenBank) methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D AB3G31_21900 homocysteine S-methyltransferase family protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
C 04382 Cornified envelope formation
D AB3G31_14445 hutH; (GenBank) histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D AB3G31_19790 hutH; (GenBank) histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:rhof01501]
D AB3G31_00880 AmpG family muropeptide MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D AB3G31_04530 nagZ; (GenBank) beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D AB3G31_12250 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D AB3G31_16280 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D AB3G31_21615 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D AB3G31_12255 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D AB3G31_16275 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D AB3G31_21620 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D AB3G31_08275 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D AB3G31_08675 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D AB3G31_16270 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D AB3G31_21510 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D AB3G31_12270 TolC family outer membrane protein K12340 tolC; outer membrane protein
D AB3G31_03350 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D AB3G31_17180 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D AB3G31_01010 mrdA; (GenBank) penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D AB3G31_19600 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D AB3G31_21785
C 01502 Vancomycin resistance [PATH:rhof01502]
D AB3G31_12305 ddpX; (GenBank) D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D AB3G31_19560 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D AB3G31_21700 alr; (GenBank) alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D AB3G31_19590 murF; (GenBank) UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D AB3G31_19585 mraY; (GenBank) phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D AB3G31_19570 murG; (GenBank) undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:rhof01503]
D AB3G31_14430 phosphoethanolamine--lipid A transferase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D AB3G31_11425 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D AB3G31_04480 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107]
D AB3G31_16425 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107]
D AB3G31_20140 thiol:disulfide interchange protein DsbA/DsbL K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D AB3G31_09830 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D AB3G31_12250 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D AB3G31_16280 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D AB3G31_21615 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D AB3G31_12255 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D AB3G31_16275 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D AB3G31_21620 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D AB3G31_12270 TolC family outer membrane protein K12340 tolC; outer membrane protein
D AB3G31_05205 lpxA; (GenBank) acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D AB3G31_07350 MBOAT family O-acyltransferase K03739 dltB; membrane protein involved in D-alanine export
D AB3G31_21785
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:rhof01000]
C 01001 Protein kinases [BR:rhof01001]
D AB3G31_01350 PA4780 family RIO1-like protein kinase K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1]
D AB3G31_03580 type II toxin-antitoxin system HipA family toxin K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D AB3G31_07445 epsG; (GenBank) chain length determinant protein tyrosine kinase EpsG K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D AB3G31_17055 XrtA-associated tyrosine autokinase K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D AB3G31_09935 phoR; (GenBank) phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D AB3G31_09795 ATP-binding protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D AB3G31_07075 creC; (GenBank) two-component system sensor histidine kinase CreC K07641 creC; two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3]
D AB3G31_00815 ATP-binding protein K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D AB3G31_21295 DUF4118 domain-containing protein K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D AB3G31_13615 sensor histidine kinase N-terminal domain-containing protein K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D AB3G31_03525 ATP-binding protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D AB3G31_12920 cache domain-containing protein K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3]
D AB3G31_03565 histidine kinase K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3]
D AB3G31_16375 glnL; (GenBank) nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D AB3G31_02680 ATP-binding protein K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D AB3G31_02890 HAMP domain-containing sensor histidine kinase K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D AB3G31_10270 ATP-binding protein K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
D AB3G31_05790 ATP-binding protein K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D AB3G31_05805 ATP-binding protein K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D AB3G31_10720 ATP-binding protein K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D AB3G31_02575 chemotaxis protein CheW K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D AB3G31_18285 Hpt domain-containing protein K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D AB3G31_19005 PAS domain S-box protein K11711 dctS; two-component system, LuxR family, sensor histidine kinase DctS [EC:2.7.13.3]
D AB3G31_21590 PAS domain S-box protein K11711 dctS; two-component system, LuxR family, sensor histidine kinase DctS [EC:2.7.13.3]
D AB3G31_13215 ATP-binding protein K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D AB3G31_20090 ATP-binding protein K19621 phcS; two-component system, sensor histidine kinase PhcS [EC:2.7.13.3]
D AB3G31_00735 ATP-binding protein K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
D AB3G31_15530 response regulator K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
D AB3G31_15885 ATP-binding protein K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:rhof01009]
D AB3G31_18985 ahcY; (GenBank) adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D AB3G31_21150 htpG; (GenBank) molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D AB3G31_01950 Stp1/IreP family PP2C-type Ser/Thr phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D AB3G31_09190 protein phosphatase 2C domain-containing protein K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D AB3G31_16780 PP2C family serine/threonine-protein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D AB3G31_12945 serB; (GenBank) phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:rhof01002]
D AB3G31_04890 lspA; (GenBank) signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D AB3G31_04340 A24 family peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D AB3G31_11890 guaA; (GenBank) glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D AB3G31_00420 type 1 glutamine amidotransferase K07010 K07010; putative glutamine amidotransferase
D AB3G31_13405 gamma-glutamyl-gamma-aminobutyrate hydrolase family protein K07010 K07010; putative glutamine amidotransferase
D AB3G31_04060 purF; (GenBank) amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D AB3G31_03440 glutamate synthase-related protein K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D AB3G31_14770 SIS domain-containing protein K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D AB3G31_17910 glmS; (GenBank) glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D AB3G31_03510 asparagine synthase-related protein K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D AB3G31_17005 XrtA/PEP-CTERM system amidotransferase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D AB3G31_01825 DJ-1/PfpI family protein K05520 yhbO; deglycase [EC:3.5.1.124]
D AB3G31_03960 pepN; (GenBank) aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D AB3G31_08160 M3 family metallopeptidase K01414 prlC; oligopeptidase A [EC:3.4.24.70]
D AB3G31_12305 ddpX; (GenBank) D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D AB3G31_11715 M15 family metallopeptidase K17733 cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-]
D AB3G31_15200 M15 family metallopeptidase K17733 cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-]
D AB3G31_18555 pitrilysin family protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D AB3G31_18560 pitrilysin family protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D AB3G31_10375 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D AB3G31_12275 membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D AB3G31_18180 dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D AB3G31_13125 dapE; (GenBank) succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D AB3G31_07635 uraD; (GenBank) 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase K02083 allC; allantoate deiminase [EC:3.5.3.9]
D AB3G31_12415 map; (GenBank) type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D AB3G31_15300 map; (GenBank) type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D AB3G31_22010 aminopeptidase P N-terminal domain-containing protein K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D AB3G31_05255 ftsH; (GenBank) ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D AB3G31_07535 M48 family metallopeptidase K06013 STE24; STE24 endopeptidase [EC:3.4.24.84]
D AB3G31_20610 htpX; (GenBank) protease HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D AB3G31_01905 M48 family metalloprotease K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-]
D AB3G31_05180 rseP; (GenBank) RIP metalloprotease RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D AB3G31_21775 biotin/lipoyl-binding protein K16922 yydH; putative peptide zinc metalloprotease protein
D AB3G31_19830 M90 family metallopeptidase K09933 mtfA; MtfA peptidase
D AB3G31_04480 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107]
D AB3G31_16425 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107]
D AB3G31_04250 trypsin-like peptidase domain-containing protein K04772 degQ; serine protease DegQ [EC:3.4.21.-]
D AB3G31_15860 endoproteinase ArgC K01337 E3.4.21.50; lysyl endopeptidase [EC:3.4.21.50]
D AB3G31_01170 D-alanyl-D-alanine carboxypeptidase family protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D AB3G31_11805 pbpG; (GenBank) D-alanyl-D-alanine endopeptidase K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-]
D AB3G31_01745 dacB; (GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D AB3G31_07275 clpP; (GenBank) ATP-dependent Clp endopeptidase proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D AB3G31_07285 lon; (GenBank) endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D AB3G31_14685 lexA; (GenBank) transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D AB3G31_04490 lepB; (GenBank) signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D AB3G31_06075 pip; (GenBank) prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D AB3G31_07725 S41 family peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D AB3G31_04405 S49 family peptidase K04773 sppA; protease IV [EC:3.4.21.-]
D AB3G31_11860 LD-carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D AB3G31_15695 HK97 family phage prohead protease K06904 GP4; Escherichia/Staphylococcus phage prohead protease
D AB3G31_08190 MFS transporter K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D AB3G31_19625 hslV; (GenBank) ATP-dependent protease subunit HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D AB3G31_05665 isoaspartyl peptidase/L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D AB3G31_10435 ggt; (GenBank) gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D AB3G31_15290 gamma-glutamyltransferase family protein K22602 hpxW; oxamate amidohydrolase [EC:3.5.1.126]
D AB3G31_07110 pmbA; (GenBank) metalloprotease PmbA K03592 pmbA; PmbA protein
D AB3G31_02810 tldD; (GenBank) metalloprotease TldD K03568 tldD; TldD protein
D AB3G31_16650 MG2 domain-containing protein K06894 yfhM; alpha-2-macroglobulin
D AB3G31_09285 hflC; (GenBank) protease modulator HflC K04087 hflC; modulator of FtsH protease HflC
D AB3G31_09280 hflK; (GenBank) FtsH protease activity modulator HflK K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases [BR:rhof01003]
D AB3G31_11885 glycosyltransferase family 2 protein K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83]
D AB3G31_11645 glgA; (GenBank) glycogen synthase GlgA K00703 glgA; starch synthase [EC:2.4.1.21]
D AB3G31_02775 transglycosylase domain-containing protein K03814 mtgA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D AB3G31_16645 pbpC; (GenBank) penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D AB3G31_03350 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D AB3G31_17180 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D AB3G31_19575 ftsW; (GenBank) putative lipid II flippase FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D AB3G31_02805 rodA; (GenBank) rod shape-determining protein RodA K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D AB3G31_10250 mdoH; (GenBank) glucans biosynthesis glucosyltransferase MdoH K03669 mdoH; membrane glycosyltransferase [EC:2.4.1.-]
D AB3G31_16330 glucoamylase family protein K13688 chvB; cyclic beta-1,2-glucan glucanotransferase [EC:2.4.1.397]
D AB3G31_07440 glycosyltransferase family 2 protein K16557 exoA; succinoglycan biosynthesis protein ExoA [EC:2.4.-.-]
D AB3G31_05590 glycosyltransferase K16562 exoW; succinoglycan biosynthesis protein ExoW [EC:2.4.-.-]
D AB3G31_19335 pgaC; (GenBank) poly-beta-1,6-N-acetyl-D-glucosamine synthase K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:rhof01005]
D AB3G31_05205 lpxA; (GenBank) acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D AB3G31_05210 lpxB; (GenBank) lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D AB3G31_19540 lpxC; (GenBank) UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D AB3G31_05195 lpxD; (GenBank) UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D AB3G31_09820 UDP-2,3-diacylglucosamine diphosphatase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D AB3G31_14660 lpxK; (GenBank) tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D AB3G31_03290 lysophospholipid acyltransferase family protein K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D AB3G31_03295 lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D AB3G31_11665 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D AB3G31_10650 acyloxyacyl hydrolase K12976 pagL; lipid A 3-O-deacylase [EC:3.1.1.-]
D AB3G31_14430 phosphoethanolamine--lipid A transferase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D AB3G31_13875 kdsA; (GenBank) 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D AB3G31_14670 kdsB; (GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D AB3G31_22120 HAD hydrolase family protein K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D AB3G31_22125 KpsF/GutQ family sugar-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D AB3G31_05520 rfaE1; (GenBank) D-glycero-beta-D-manno-heptose-7-phosphate kinase K21344 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase [EC:2.7.1.167]
D AB3G31_00215 rfaE2; (GenBank) D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase K21345 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase [EC:2.7.7.70]
D AB3G31_11655 waaC; (GenBank) lipopolysaccharide heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D AB3G31_11660 waaC; (GenBank) lipopolysaccharide heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D AB3G31_00835 waaF; (GenBank) lipopolysaccharide heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D AB3G31_13325 O-antigen ligase family protein K02847 waaL; O-antigen ligase [EC:2.4.99.26]
D AB3G31_13315 glycosyltransferase family 9 protein K02849 waaQ; lipopolysaccharide heptosyltransferase III [EC:2.4.99.25]
D AB3G31_20865 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D AB3G31_19080 gmhB; (GenBank) D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D AB3G31_05515 rfaD; (GenBank) ADP-glyceromanno-heptose 6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D AB3G31_13720 glycosyltransferase family 2 protein K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
D AB3G31_04540 sugar transferase K13012 wbqP; O-antigen biosynthesis protein WbqP
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:rhof01011]
D AB3G31_03495 murA; (GenBank) UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D AB3G31_04020 murB; (GenBank) UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D AB3G31_19565 murC; (GenBank) UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D AB3G31_19580 murD; (GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D AB3G31_19595 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D AB3G31_19560 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D AB3G31_21700 alr; (GenBank) alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D AB3G31_09035 aspartate/glutamate racemase family protein K01776 murI; glutamate racemase [EC:5.1.1.3]
D AB3G31_11860 LD-carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D AB3G31_19585 mraY; (GenBank) phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D AB3G31_19570 murG; (GenBank) undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D AB3G31_15855 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D AB3G31_16755 murJ; (GenBank) murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D AB3G31_03350 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D AB3G31_17180 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D AB3G31_16645 pbpC; (GenBank) penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D AB3G31_01010 mrdA; (GenBank) penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D AB3G31_19600 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D AB3G31_01170 D-alanyl-D-alanine carboxypeptidase family protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D AB3G31_01745 dacB; (GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D AB3G31_11805 pbpG; (GenBank) D-alanyl-D-alanine endopeptidase K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-]
D AB3G31_02775 transglycosylase domain-containing protein K03814 mtgA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D AB3G31_19575 ftsW; (GenBank) putative lipid II flippase FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D AB3G31_02805 rodA; (GenBank) rod shape-determining protein RodA K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D AB3G31_12305 ddpX; (GenBank) D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D AB3G31_11715 M15 family metallopeptidase K17733 cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-]
D AB3G31_15200 M15 family metallopeptidase K17733 cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-]
D AB3G31_18665 transglycosylase SLT domain-containing protein K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D AB3G31_21575 MltA domain-containing protein K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29]
D AB3G31_00030 lytic murein transglycosylase K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D AB3G31_13035 mltB; (GenBank) lytic murein transglycosylase B K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D AB3G31_10065 transglycosylase SLT domain-containing protein K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D AB3G31_11995 mltG; (GenBank) endolytic transglycosylase MltG K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D AB3G31_18365 septal ring lytic transglycosylase RlpA family protein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D AB3G31_11425 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D AB3G31_02880 ampD; (GenBank) 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:rhof01004]
D AB3G31_04440 fabD; (GenBank) ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D AB3G31_21320 acyltransferase domain-containing protein K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D AB3G31_04435 beta-ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D AB3G31_18465 iron-containing redox enzyme family protein K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D AB3G31_19730 beta-ketoacyl-[acyl-carrier-protein] synthase family protein K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D AB3G31_04455 fabF; (GenBank) beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D AB3G31_03815 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AB3G31_04445 fabG; (GenBank) 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AB3G31_07585 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AB3G31_10740 SDR family NAD(P)-dependent oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AB3G31_19715 fabG; (GenBank) 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AB3G31_05200 fabZ; (GenBank) 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D AB3G31_11520 fabI; (GenBank) enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D AB3G31_09320 arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D AB3G31_20675 acyl-CoA thioesterase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
D AB3G31_04960 fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D AB3G31_01540 fatty acid desaturase K10255 FAD6; acyl-lipid omega-6 desaturase (Delta-12 desaturase) [EC:1.14.19.23 1.14.19.45]
D AB3G31_14300 acs; (GenBank) acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D AB3G31_13820 propionate--CoA ligase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D AB3G31_06655 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D AB3G31_19180 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D AB3G31_20345 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D AB3G31_08475 AMP-binding protein K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D AB3G31_04430 plsX; (GenBank) phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D AB3G31_04000 plsY; (GenBank) glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D AB3G31_18125 lysophospholipid acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D AB3G31_19075 lysophospholipid acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:rhof01008]
D AB3G31_04140 alpha-hydroxy acid oxidase K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46]
D AB3G31_13555 amino acid racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
C 01006 Prenyltransferases [BR:rhof01006]
D AB3G31_05050 polyprenyl synthetase family protein K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D AB3G31_16580 polyprenyl synthetase family protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D AB3G31_05165 uppS; (GenBank) polyprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D AB3G31_07245 hpnD; (GenBank) presqualene diphosphate synthase HpnD K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D AB3G31_10975 miaA; (GenBank) tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D AB3G31_01405 ubiA; (GenBank) 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D AB3G31_17960 cyoE; (GenBank) heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:rhof01007]
D AB3G31_04065 gltX; (GenBank) glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D AB3G31_05965 glutamine--tRNA ligase/YqeY domain fusion protein K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D AB3G31_09520 gluQRS; (GenBank) tRNA glutamyl-Q(34) synthetase GluQRS K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D AB3G31_18875 tyrS; (GenBank) tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D AB3G31_03820 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D AB3G31_09840 cysS; (GenBank) cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D AB3G31_20150 argS; (GenBank) arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D AB3G31_05305 metG; (GenBank) methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D AB3G31_04895 ileS; (GenBank) isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D AB3G31_16130 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D AB3G31_20280 leuS; (GenBank) leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D AB3G31_04535 lysS; (GenBank) lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D AB3G31_16655 aspS; (GenBank) aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D AB3G31_09250 hisS; (GenBank) histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D AB3G31_19090 glyQ; (GenBank) glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D AB3G31_19085 glyS; (GenBank) glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D AB3G31_06520 serS; (GenBank) serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D AB3G31_16550 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D AB3G31_08690 thrS; (GenBank) threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D AB3G31_09465 alaS; (GenBank) alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D AB3G31_08710 pheS; (GenBank) phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D AB3G31_08715 pheT; (GenBank) phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D AB3G31_04735 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D AB3G31_15150 alaC; (GenBank) alanine transaminase K14261 alaC; alanine-synthesizing transaminase [EC:2.6.1.-]
D AB3G31_11080 amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D AB3G31_10350 pyridoxal phosphate-dependent aminotransferase K14287 ybdL; methionine transaminase [EC:2.6.1.88]
D AB3G31_13110 dapC; (GenBank) succinyldiaminopimelate transaminase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
D AB3G31_07520 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D AB3G31_14180 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D AB3G31_16955 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D AB3G31_17515 kbl; (GenBank) glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D AB3G31_01840 bioF; (GenBank) 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D AB3G31_00660 aspartate aminotransferase family protein K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D AB3G31_17325 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D AB3G31_02125 gabT; (GenBank) 4-aminobutyrate--2-oxoglutarate transaminase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D AB3G31_13395 aspartate aminotransferase family protein K12256 spuC; putrescine---pyruvate transaminase [EC:2.6.1.113]
D AB3G31_01845 bioA; (GenBank) adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D AB3G31_13530 transaminase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D AB3G31_18320 hemL; (GenBank) glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D AB3G31_20975 D-amino acid aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D AB3G31_00825 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D AB3G31_20245 pabB; (GenBank) aminodeoxychorismate synthase component I K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38]
D AB3G31_05560 serC; (GenBank) 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:rhof00194]
D AB3G31_20925 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D AB3G31_20930 atpD; (GenBank) F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D AB3G31_20935 atpG; (GenBank) F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D AB3G31_20940 atpA; (GenBank) F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D AB3G31_20945 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D AB3G31_20950 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D AB3G31_20955 atpE; (GenBank) F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D AB3G31_20960 atpB; (GenBank) F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D AB3G31_20965 ATP synthase subunit I K02116 atpI; ATP synthase protein I
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:rhof03000]
D AB3G31_03905 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D AB3G31_15030 helix-turn-helix domain-containing protein K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D AB3G31_20505 helix-turn-helix domain-containing protein K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D AB3G31_11615 Ada metal-binding domain-containing protein K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D AB3G31_16745 GlxA family transcriptional regulator K17736 cdhR; AraC family transcriptional regulator, carnitine catabolism transcriptional activator
D AB3G31_18235 GlxA family transcriptional regulator K21826 gbdR; AraC family transcriptional regulator, glycine betaine-responsive activator
D AB3G31_01255 LysR substrate-binding domain-containing protein K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D AB3G31_09965 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D AB3G31_17255 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D AB3G31_18655 LysR substrate-binding domain-containing protein K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D AB3G31_21210 LysR substrate-binding domain-containing protein K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D AB3G31_05325 LysR family transcriptional regulator K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA
D AB3G31_01395 LysR substrate-binding domain-containing protein K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D AB3G31_02165 HTH-type transcriptional regulator ArgP K05596 argP; LysR family transcriptional regulator, arginine and lysine transport system/DNA replication regulator
D AB3G31_21990 LysR family transcriptional regulator ArgP K05596 argP; LysR family transcriptional regulator, arginine and lysine transport system/DNA replication regulator
D AB3G31_14785 LysR substrate-binding domain-containing protein K11921 cynR; LysR family transcriptional regulator, cyn operon transcriptional activator
D AB3G31_10355 CysB family HTH-type transcriptional regulator K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator
D AB3G31_08865 CysB family HTH-type transcriptional regulator K13635 cbl; LysR family transcriptional regulator, cys regulon transcriptional activator
D AB3G31_13440 LysR substrate-binding domain-containing protein K13794 tcuR; LysR family transcriptional regulator, regulatory protein for tcuABC
D AB3G31_21365 LysR family transcriptional regulator K13928 mdcR; LysR family transcriptional regulator, malonate utilization transcriptional regulator
D AB3G31_06085 LysR substrate-binding domain-containing protein K14057 abgR; LysR family transcriptional regulator, regulator of abg operon
D AB3G31_11265 LysR family transcriptional regulator K16135 dmlR; LysR family transcriptional regulator, transcriptional activator for dmlA
D AB3G31_14155 LysR substrate-binding domain-containing protein K16135 dmlR; LysR family transcriptional regulator, transcriptional activator for dmlA
D AB3G31_09630 LysR substrate-binding domain-containing protein K19338 nac; LysR family transcriptional regulator, nitrogen assimilation regulatory protein
D AB3G31_10580 LysR family transcriptional regulator K21645 hypT; LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT
D AB3G31_20660 LysR substrate-binding domain-containing protein K21645 hypT; LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT
D AB3G31_00655 LysR family transcriptional regulator K21699 bauR; LysR family transcriptional regulator, transcriptional activator for bauABCD operon
D AB3G31_07830 LysR family transcriptional regulator K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
D AB3G31_14810 LysR family transcriptional regulator K21757 benM; LysR family transcriptional regulator, benzoate and cis,cis-muconate-responsive activator of ben and cat genes
D AB3G31_20020 DeoR/GlpR family DNA-binding transcription regulator K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D AB3G31_00310 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D AB3G31_00345 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D AB3G31_00665 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D AB3G31_07030 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D AB3G31_08435 substrate-binding domain-containing protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D AB3G31_10680 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D AB3G31_14965 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D AB3G31_14985 substrate-binding domain-containing protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D AB3G31_16925 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D AB3G31_18710 substrate-binding domain-containing protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D AB3G31_19460 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D AB3G31_20760 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D AB3G31_01640 LacI family DNA-binding transcriptional regulator K03435 fruR1; LacI family transcriptional regulator, fructose operon transcriptional repressor
D AB3G31_01015 LacI family DNA-binding transcriptional regulator K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
D AB3G31_04930 LacI family DNA-binding transcriptional regulator K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
D AB3G31_07140 substrate-binding domain-containing protein K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
D AB3G31_16005 LacI family DNA-binding transcriptional regulator K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
D AB3G31_14440 hutC; (GenBank) histidine utilization repressor K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor
D AB3G31_19780 hutC; (GenBank) histidine utilization repressor K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor
D AB3G31_17450 GntR family transcriptional regulator K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
D AB3G31_04685 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D AB3G31_01580 PLP-dependent aminotransferase family protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D AB3G31_02130 PLP-dependent aminotransferase family protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D AB3G31_07185 PLP-dependent aminotransferase family protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D AB3G31_16285 TetR family transcriptional regulator K03577 acrR; TetR/AcrR family transcriptional regulator, acrAB operon repressor
D AB3G31_20590 slmA; (GenBank) nucleoid occlusion factor SlmA K05501 slmA; TetR/AcrR family transcriptional regulator
D AB3G31_20470 TetR/AcrR family transcriptional regulator K09017 rutR; TetR/AcrR family transcriptional regulator
D AB3G31_07225 TetR/AcrR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D AB3G31_11045 TetR/AcrR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D AB3G31_11325 TetR/AcrR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D AB3G31_18330 TetR/AcrR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D AB3G31_20520 helix-turn-helix domain-containing protein K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D AB3G31_01455 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D AB3G31_13580 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D AB3G31_14165 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D AB3G31_17915 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D AB3G31_19135 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D AB3G31_20815 Lrp/AsnC ligand binding domain-containing protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D AB3G31_17655 Lrp/AsnC family transcriptional regulator K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
D AB3G31_15925 MarR family winged helix-turn-helix transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D AB3G31_21425 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D AB3G31_11955 MerR family transcriptional regulator K08365 merR; MerR family transcriptional regulator, mercuric resistance operon regulatory protein
D AB3G31_12205 Fur family transcriptional regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D AB3G31_20305 fur; (GenBank) ferric iron uptake transcriptional regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D AB3G31_09130 IclR family transcriptional regulator C-terminal domain-containing protein K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein
D AB3G31_12460 IclR family transcriptional regulator C-terminal domain-containing protein K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein
D AB3G31_14845 IclR family transcriptional regulator K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein
D AB3G31_17175 IclR family transcriptional regulator C-terminal domain-containing protein K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein
D AB3G31_14705 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D AB3G31_15390 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D AB3G31_18615 cyclic nucleotide-binding domain-containing protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D AB3G31_20845 cyclic nucleotide-binding domain-containing protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D AB3G31_02190 fnr; (GenBank) fumarate/nitrate reduction transcriptional regulator Fnr K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D AB3G31_11095 iscR; (GenBank) Fe-S cluster assembly transcriptional regulator IscR K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D AB3G31_04995 metalloregulator ArsR/SmtB family transcription factor K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D AB3G31_17485 SIS domain-containing protein K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator
D AB3G31_00095 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D AB3G31_18355 Fis family transcriptional regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D AB3G31_03575 helix-turn-helix domain-containing protein K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB
D AB3G31_07580 transcriptional regulator K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D AB3G31_04855 sigma-54-dependent Fis family transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D AB3G31_19110 sigma-54-dependent Fis family transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D AB3G31_03600 norR; (GenBank) nitric oxide reductase transcriptional regulator NorR K12266 norR; anaerobic nitric oxide reductase transcription regulator
D AB3G31_12055 LysR family transcriptional regulator K02019 modE; molybdate transport system regulatory protein
D AB3G31_16835 proline dehydrogenase family protein K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D AB3G31_20785 L-glutamate gamma-semialdehyde dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D AB3G31_04835 4Fe-4S binding protein K19339 nosR; NosR/NirI family transcriptional regulator, nitrous oxide reductase regulator
D AB3G31_12135 BolA family protein K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D AB3G31_00610 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D AB3G31_03035 hrcA; (GenBank) heat-inducible transcriptional repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D AB3G31_18140 pyrR; (GenBank) bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D AB3G31_14615 AlpA family phage regulatory protein K07733 alpA; prophage regulatory protein
D AB3G31_15820 AlpA family phage regulatory protein K07733 alpA; prophage regulatory protein
D AB3G31_18105 FMN-binding negative transcriptional regulator K07734 paiB; transcriptional regulator
D AB3G31_18150 YqgE/AlgH family protein K07735 algH; putative transcriptional regulator
D AB3G31_19635 dksA; (GenBank) RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D AB3G31_16440 nrdR; (GenBank) transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR
D AB3G31_19615 mraZ; (GenBank) division/cell wall cluster transcriptional repressor MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:rhof03021]
D AB3G31_19900 rpoA; (GenBank) DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D AB3G31_02700 rpoC; (GenBank) DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D AB3G31_04205 rpoZ; (GenBank) DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D AB3G31_09760 rpoD; (GenBank) RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D AB3G31_15405 sigma-70 family RNA polymerase sigma factor K03087 rpoS; RNA polymerase nonessential primary-like sigma factor
D AB3G31_04465 rpoE; (GenBank) RNA polymerase sigma factor RpoE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D AB3G31_08250 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D AB3G31_12890 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D AB3G31_12940 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D AB3G31_13065 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D AB3G31_17950 rpoH; (GenBank) RNA polymerase sigma factor RpoH K03089 rpoH; RNA polymerase sigma-32 factor
D AB3G31_20125 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D AB3G31_02375 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
D AB3G31_11550 nusA; (GenBank) transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D AB3G31_16495 nusB; (GenBank) transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D AB3G31_02730 nusG; (GenBank) transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D AB3G31_04285 glutathione S-transferase N-terminal domain-containing protein K03599 sspA; stringent starvation protein A
D AB3G31_04290 ClpXP protease specificity-enhancing factor K03600 sspB; stringent starvation protein B
D AB3G31_04470 sigma-E factor negative regulatory protein K03597 rseA; sigma-E factor negative regulatory protein RseA
D AB3G31_04475 MucB/RseB C-terminal domain-containing protein K03598 rseB; sigma-E factor negative regulatory protein RseB
D AB3G31_19635 dksA; (GenBank) RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D AB3G31_05235 greA; (GenBank) transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D AB3G31_04195 greB; (GenBank) transcription elongation factor GreB K04760 greB; transcription elongation factor GreB
D AB3G31_09950 rho; (GenBank) transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:rhof03019]
D AB3G31_04360 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12]
D AB3G31_10900 rng; (GenBank) ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D AB3G31_04500 rnc; (GenBank) ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D AB3G31_05120 rnr; (GenBank) ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D AB3G31_22030 ribonuclease K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24]
D AB3G31_07540 orn; (GenBank) oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D AB3G31_07290 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D AB3G31_11760 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D AB3G31_14930 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D AB3G31_21915 recQ; (GenBank) DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D AB3G31_13880 eno; (GenBank) phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D AB3G31_08545 pnp; (GenBank) polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D AB3G31_09950 rho; (GenBank) transcription termination factor Rho K03628 rho; transcription termination factor Rho
D AB3G31_14410 dnaK; (GenBank) molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D AB3G31_17430 groL; (GenBank) chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D AB3G31_09270 hfq; (GenBank) RNA chaperone Hfq K03666 hfq; host factor-I protein
D AB3G31_11840 ppk1; (GenBank) polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D AB3G31_11085 ppk2; (GenBank) polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D AB3G31_11240 ppk2; (GenBank) polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D AB3G31_07330 pcnB; (GenBank) polynucleotide adenylyltransferase PcnB K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D AB3G31_16555 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D AB3G31_13575 rraA; (GenBank) ribonuclease E activity regulator RraA K02553 rraA; regulator of ribonuclease activity A
D AB3G31_03020 rapZ; (GenBank) RNase adapter RapZ K06958 rapZ; RNase adapter protein RapZ
D AB3G31_10320 hrpA; (GenBank) ATP-dependent RNA helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:rhof03011]
D AB3G31_05540 rpsA; (GenBank) 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D AB3G31_05145 rpsB; (GenBank) 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D AB3G31_01230 rpsC; (GenBank) 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D AB3G31_19905 rpsD; (GenBank) 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D AB3G31_19940 rpsE; (GenBank) 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D AB3G31_06490 rpsF; (GenBank) 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D AB3G31_01180 rpsG; (GenBank) 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D AB3G31_19955 rpsH; (GenBank) 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D AB3G31_18900 rpsI; (GenBank) 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D AB3G31_01195 rpsJ; (GenBank) 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D AB3G31_19910 rpsK; (GenBank) 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D AB3G31_01175 rpsL; (GenBank) 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D AB3G31_19915 rpsM; (GenBank) 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D AB3G31_19960 rpsN; (GenBank) 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D AB3G31_08540 rpsO; (GenBank) 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D AB3G31_07490 rpsP; (GenBank) 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D AB3G31_01245 rpsQ; (GenBank) 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D AB3G31_06500 rpsR; (GenBank) 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D AB3G31_01220 rpsS; (GenBank) 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D AB3G31_16750 rpsT; (GenBank) 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D AB3G31_07155 rpsU; (GenBank) 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D AB3G31_02720 rplA; (GenBank) 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D AB3G31_01215 rplB; (GenBank) 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D AB3G31_01200 rplC; (GenBank) 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D AB3G31_01205 rplD; (GenBank) 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D AB3G31_19965 rplE; (GenBank) 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D AB3G31_19950 rplF; (GenBank) 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D AB3G31_06505 rplI; (GenBank) 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D AB3G31_02715 rplJ; (GenBank) 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D AB3G31_02725 rplK; (GenBank) 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D AB3G31_02710 rplL; (GenBank) 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D AB3G31_18905 rplM; (GenBank) 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D AB3G31_19975 rplN; (GenBank) 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D AB3G31_19930 rplO; (GenBank) 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D AB3G31_01235 rplP; (GenBank) 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D AB3G31_19895 rplQ; (GenBank) 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D AB3G31_19945 rplR; (GenBank) 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D AB3G31_07505 rplS; (GenBank) 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D AB3G31_08705 rplT; (GenBank) 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D AB3G31_16575 rplU; (GenBank) 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D AB3G31_01225 rplV; (GenBank) 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D AB3G31_01210 rplW; (GenBank) 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D AB3G31_19970 rplX; (GenBank) 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D AB3G31_16570 rpmA; (GenBank) 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D AB3G31_03850 rpmB; (GenBank) 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D AB3G31_01240 rpmC; (GenBank) 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D AB3G31_19935 rpmD; (GenBank) 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D AB3G31_09945 type B 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D AB3G31_04425 rpmF; (GenBank) 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D AB3G31_03845 rpmG; (GenBank) 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D AB3G31_22170 rpmH; (GenBank) 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D AB3G31_08700 rpmI; (GenBank) 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D AB3G31_19920 rpmJ; (GenBank) 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D AB3G31_02975 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25
D AB3G31_02605 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AB3G31_02630 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AB3G31_02620 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AB3G31_02645 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AB3G31_02625 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AB3G31_02650 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 03009 Ribosome biogenesis [BR:rhof03009]
D AB3G31_04500 rnc; (GenBank) ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D AB3G31_01350 PA4780 family RIO1-like protein kinase K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1]
D AB3G31_07540 orn; (GenBank) oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D AB3G31_04505 era; (GenBank) GTPase Era K03595 era; GTPase
D AB3G31_16565 cgtA; (GenBank) Obg family GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-]
D AB3G31_19635 dksA; (GenBank) RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D AB3G31_11550 nusA; (GenBank) transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D AB3G31_16495 nusB; (GenBank) transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D AB3G31_02730 nusG; (GenBank) transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D AB3G31_16415 16S rRNA pseudouridine(516) synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D AB3G31_22045 rsmA; (GenBank) 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D AB3G31_02690 rsmB; (GenBank) 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D AB3G31_04955 RsmB/NOP family class I SAM-dependent RNA methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D AB3G31_18550 rsmD; (GenBank) 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D AB3G31_22065 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D AB3G31_00590 rsmG; (GenBank) 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D AB3G31_08200 rsmH; (GenBank) 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D AB3G31_19610 rsmH; (GenBank) 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D AB3G31_04410 SAM-dependent methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D AB3G31_20875 rsmI; (GenBank) 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D AB3G31_18980 TlyA family RNA methyltransferase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D AB3G31_09330 rlmB; (GenBank) 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D AB3G31_05250 RlmE family RNA methyltransferase K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D AB3G31_10870 rlmH; (GenBank) 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D AB3G31_08210 class I SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D AB3G31_19645 class I SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D AB3G31_18915 rlmJ; (GenBank) 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266]
D AB3G31_20120 THUMP domain-containing protein K25137 rlmL; 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.173]
D AB3G31_09230 rlmN; (GenBank) 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D AB3G31_04085 rlmD; (GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D AB3G31_09505 pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D AB3G31_11290 pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D AB3G31_09220 pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D AB3G31_04355 RluA family pseudouridine synthase K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D AB3G31_09210 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D AB3G31_20770 pseudouridine synthase K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
D AB3G31_18380 RNA pseudouridine synthase K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
D AB3G31_21285 pseudouridine synthase K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
D AB3G31_01735 rimI; (GenBank) ribosomal protein S18-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D AB3G31_07495 rimM; (GenBank) ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM
D AB3G31_05105 rimO; (GenBank) 30S ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D AB3G31_02850 prmA; (GenBank) 50S ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D AB3G31_13130 prmB; (GenBank) 50S ribosomal protein L3 N(5)-glutamine methyltransferase K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298]
D AB3G31_05885 cupin domain-containing protein K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47]
D AB3G31_04360 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12]
D AB3G31_10900 rng; (GenBank) ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D AB3G31_18145 ruvX; (GenBank) Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D AB3G31_20600 dbpA; (GenBank) ATP-dependent RNA helicase DbpA K05591 dbpA; ATP-dependent RNA helicase DbpA [EC:5.6.2.6]
D AB3G31_07525 rsgA; (GenBank) ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D AB3G31_09265 der; (GenBank) ribosome biogenesis GTPase Der K03977 engA; GTPase
D AB3G31_17660 ylqF; (GenBank) ribosome biogenesis GTPase YlqF K14540 rbgA; ribosome biogenesis GTPase A
D AB3G31_09275 hflX; (GenBank) GTPase HflX K03665 hflX; GTPase
D AB3G31_01765 L-threonylcarbamoyladenylate synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D AB3G31_04200 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D AB3G31_11560 rbfA; (GenBank) 30S ribosome-binding factor RbfA K02834 rbfA; ribosome-binding factor A
D AB3G31_11545 rimP; (GenBank) ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP
D AB3G31_10865 rsfS; (GenBank) ribosome silencing factor K09710 ybeB; ribosome-associated protein
D AB3G31_18835 ybeY; (GenBank) rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor
D AB3G31_05245 YhbY family RNA-binding protein K07574 yhbY; RNA-binding protein
D AB3G31_07105 yjgA; (GenBank) ribosome biogenesis factor YjgA K09889 yjgA; ribosome-associated protein
D AB3G31_20320 raiA; (GenBank) ribosome-associated translation inhibitor RaiA K05808 hpf; ribosome hibernation promoting factor
D AB3G31_18385 ychF; (GenBank) redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase
D AB3G31_04420 YceD family protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:rhof03016]
D AB3G31_22030 ribonuclease K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24]
D AB3G31_18715 multifunctional CCA addition/repair protein K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D AB3G31_04065 gltX; (GenBank) glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D AB3G31_16550 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D AB3G31_04895 ileS; (GenBank) isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D AB3G31_20280 leuS; (GenBank) leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D AB3G31_05305 metG; (GenBank) methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D AB3G31_05965 glutamine--tRNA ligase/YqeY domain fusion protein K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D AB3G31_20150 argS; (GenBank) arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D AB3G31_04535 lysS; (GenBank) lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D AB3G31_16655 aspS; (GenBank) aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D AB3G31_09465 alaS; (GenBank) alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D AB3G31_08690 thrS; (GenBank) threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D AB3G31_06520 serS; (GenBank) serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D AB3G31_09840 cysS; (GenBank) cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D AB3G31_16130 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D AB3G31_09250 hisS; (GenBank) histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D AB3G31_08710 pheS; (GenBank) phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D AB3G31_08715 pheT; (GenBank) phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D AB3G31_18875 tyrS; (GenBank) tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D AB3G31_03820 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D AB3G31_18850 dtd; (GenBank) D-aminoacyl-tRNA deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D AB3G31_04230 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D AB3G31_09510 trmB; (GenBank) tRNA (guanosine(46)-N7)-methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D AB3G31_04615 truA; (GenBank) tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D AB3G31_11565 truB; (GenBank) tRNA pseudouridine(55) synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D AB3G31_11100 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D AB3G31_17650 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D AB3G31_01765 L-threonylcarbamoyladenylate synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D AB3G31_10975 miaA; (GenBank) tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D AB3G31_22150 mnmE; (GenBank) tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D AB3G31_00585 mnmG; (GenBank) tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D AB3G31_13685 selD; (GenBank) selenide, water dikinase SelD K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D AB3G31_22165 ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D AB3G31_19680 rnpB; (GenBank) RNase P RNA component class A K01978 rnpB; RNase P catalytic RNA component
D AB3G31_16775 rph; (GenBank) ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D AB3G31_05935 RNB domain-containing ribonuclease K01147 rnb; exoribonuclease II [EC:3.1.13.1]
D AB3G31_11755 ettA; (GenBank) energy-dependent translational throttle protein EttA K06020 ettA; energy-dependent translational throttle protein EttA
D AB3G31_19090 glyQ; (GenBank) glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D AB3G31_19085 glyS; (GenBank) glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D AB3G31_09520 gluQRS; (GenBank) tRNA glutamyl-Q(34) synthetase GluQRS K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D AB3G31_14435 dusA; (GenBank) tRNA dihydrouridine(20/20a) synthase DusA K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
D AB3G31_18360 dusB; (GenBank) tRNA dihydrouridine synthase DusB K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D AB3G31_06010 tRNA-dihydrouridine synthase K05541 dusC; tRNA-dihydrouridine synthase C [EC:1.-.-.-]
D AB3G31_18480 miaB; (GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D AB3G31_07060 RNA methyltransferase K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-]
D AB3G31_07500 trmD; (GenBank) tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D AB3G31_18035 tRNA (cytidine(34)-2'-O)-methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D AB3G31_05220 RNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family
D AB3G31_09505 pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D AB3G31_11290 pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D AB3G31_20370 mnmA; (GenBank) tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D AB3G31_18770 ttcA; (GenBank) tRNA 2-thiocytidine(32) synthetase TtcA K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D AB3G31_16135 sulfurtransferase TusA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D AB3G31_11110 iscA; (GenBank) iron-sulfur cluster assembly protein IscA K13628 iscA; iron-sulfur cluster assembly protein
D AB3G31_12000 folate-binding protein K06980 ygfZ; tRNA-modifying protein YgfZ
D AB3G31_10175 mnmD; (GenBank) tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-]
D AB3G31_01370 queA; (GenBank) tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D AB3G31_06605 queC; (GenBank) 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D AB3G31_06860 6-carboxytetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D AB3G31_06865 queE; (GenBank) 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D AB3G31_16080 queF; (GenBank) NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D AB3G31_11435 queG; (GenBank) tRNA epoxyqueuosine(34) reductase QueG K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D AB3G31_13680 mnmH; (GenBank) tRNA 2-selenouridine(34) synthase MnmH K06917 selU; tRNA 2-selenouridine synthase [EC:2.9.1.3]
D AB3G31_01365 tgt; (GenBank) tRNA guanosine(34) transglycosylase Tgt K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D AB3G31_07555 tilS; (GenBank) tRNA lysidine(34) synthetase TilS K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D AB3G31_01740 tsaB; (GenBank) tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D AB3G31_08980 tsaD; (GenBank) tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D AB3G31_11430 tsaE; (GenBank) tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D AB3G31_13285 tRNA threonylcarbamoyladenosine dehydratase K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D AB3G31_05120 rnr; (GenBank) ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D AB3G31_08545 pnp; (GenBank) polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D AB3G31_15545 type II toxin-antitoxin system VapC family toxin K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
C 03012 Translation factors [BR:rhof03012]
D AB3G31_13650 translation initiation factor Sui1 K03113 EIF1; translation initiation factor 1
D AB3G31_11555 infB; (GenBank) translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D AB3G31_08695 infC; (GenBank) translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D AB3G31_13135 ATP-binding cassette domain-containing protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D AB3G31_05150 tsf; (GenBank) translation elongation factor Ts K02357 tsf; elongation factor Ts
D AB3G31_01190 tuf; (GenBank) elongation factor Tu K02358 tuf; elongation factor Tu
D AB3G31_02745 tuf; (GenBank) elongation factor Tu K02358 tuf; elongation factor Tu
D AB3G31_01185 fusA; (GenBank) elongation factor G K02355 fusA; elongation factor G
D AB3G31_01590 fusA; (GenBank) elongation factor G K02355 fusA; elongation factor G
D AB3G31_17375 prfA; (GenBank) peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D AB3G31_05160 frr; (GenBank) ribosome recycling factor K02838 frr; ribosome recycling factor
D AB3G31_17380 prmC; (GenBank) peptide chain release factor N(5)-glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D AB3G31_02970 pth; (GenBank) aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D AB3G31_22020 infA; (GenBank) translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D AB3G31_15470 efp; (GenBank) elongation factor P K02356 efp; elongation factor P
D AB3G31_03970 prfB; (GenBank) peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D AB3G31_19240 peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
D AB3G31_09810 arfB; (GenBank) alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB K15034 yaeJ; ribosome-associated protein
C 03110 Chaperones and folding catalysts [BR:rhof03110]
D AB3G31_11815 clpA; (GenBank) ATP-dependent Clp protease ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D AB3G31_05680 clpB; (GenBank) ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D AB3G31_07280 clpX; (GenBank) ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D AB3G31_19620 hslU; (GenBank) ATP-dependent protease ATPase subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D AB3G31_21150 htpG; (GenBank) molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D AB3G31_14410 dnaK; (GenBank) molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D AB3G31_11120 hscA; (GenBank) Fe-S protein assembly chaperone HscA K04044 hscA; molecular chaperone HscA
D AB3G31_18585 Hsp70 family protein K04046 yegD; hypothetical chaperone protein
D AB3G31_17430 groL; (GenBank) chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D AB3G31_14415 dnaJ; (GenBank) molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D AB3G31_15010 DnaJ C-terminal domain-containing protein K05516 cbpA; curved DNA-binding protein
D AB3G31_11115 hscB; (GenBank) Fe-S protein assembly co-chaperone HscB K04082 hscB; molecular chaperone HscB
D AB3G31_13895 Hsp33 family molecular chaperone HslO K04083 hslO; molecular chaperone Hsp33
D AB3G31_14405 grpE; (GenBank) nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D AB3G31_06105 Hsp20/alpha crystallin family protein K13993 HSP20; HSP20 family protein
D AB3G31_08985 Hsp20/alpha crystallin family protein K13993 HSP20; HSP20 family protein
D AB3G31_13620 S4 domain-containing protein K04762 hslR; ribosome-associated heat shock protein Hsp15
D AB3G31_17425 groES; (GenBank) co-chaperone GroES K04078 groES; chaperonin GroES
D AB3G31_04480 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107]
D AB3G31_16425 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107]
D AB3G31_05255 ftsH; (GenBank) ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D AB3G31_20960 atpB; (GenBank) F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D AB3G31_07745 secB; (GenBank) protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D AB3G31_01310 YcnI family protein K09796 pccA; periplasmic copper chaperone A
D AB3G31_01315 copper chaperone PCu(A)C K09796 pccA; periplasmic copper chaperone A
D AB3G31_09830 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D AB3G31_09825 peptidylprolyl isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D AB3G31_15435 SurA N-terminal domain-containing protein K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D AB3G31_14400 FKBP-type peptidyl-prolyl cis-trans isomerase K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8]
D AB3G31_21485 FKBP-type peptidyl-prolyl cis-trans isomerase K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8]
D AB3G31_05440 FKBP-type peptidyl-prolyl cis-trans isomerase K03774 slpA; FKBP-type peptidyl-prolyl cis-trans isomerase SlpA [EC:5.2.1.8]
D AB3G31_05880 peptidylprolyl isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D AB3G31_20580 peptidylprolyl isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D AB3G31_12140 peptidylprolyl isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D AB3G31_22050 peptidylprolyl isomerase K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D AB3G31_04885 thioredoxin family protein K03671 TXN; thioredoxin
D AB3G31_09955 trxA; (GenBank) thioredoxin TrxA K03671 TXN; thioredoxin
D AB3G31_17085 trxC; (GenBank) thioredoxin TrxC K03672 trxC; thioredoxin 2 [EC:1.8.1.8]
D AB3G31_01780 trxA; (GenBank) thioredoxin K05838 ybbN; putative thioredoxin
D AB3G31_07740 grxC; (GenBank) glutaredoxin 3 K03676 grxC; glutaredoxin 3
D AB3G31_00440 glutaredoxin K07390 grxD; monothiol glutaredoxin
D AB3G31_17385 grxD; (GenBank) Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin
D AB3G31_20140 thiol:disulfide interchange protein DsbA/DsbL K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D AB3G31_10210 disulfide bond formation protein B K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9]
D AB3G31_18400 DsbC family protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
C 04131 Membrane trafficking [BR:rhof04131]
D AB3G31_09225 ndk; (GenBank) nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D AB3G31_14390 TMEM165/GDT1 family protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D AB3G31_08850 arsA; (GenBank) arsenical pump-driving ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D AB3G31_00260 gap; (GenBank) type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D AB3G31_07730 gpmA; (GenBank) 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D AB3G31_01545 pyk; (GenBank) pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D AB3G31_21150 htpG; (GenBank) molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system
C 03051 Proteasome [BR:rhof03051]
D AB3G31_21150 htpG; (GenBank) molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:rhof03032]
D AB3G31_06445 ribonuclease HI family protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D AB3G31_10080 rnhA; (GenBank) ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D AB3G31_03905 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D AB3G31_15445 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D AB3G31_08720 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D AB3G31_05535 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D AB3G31_00005 dnaA; (GenBank) chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D AB3G31_06510 dnaB; (GenBank) replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D AB3G31_09765 dnaG; (GenBank) DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D AB3G31_20525 ssb; (GenBank) single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D AB3G31_11680 dnaE; (GenBank) DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D AB3G31_00010 dnaN; (GenBank) DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D AB3G31_10380 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D AB3G31_20270 holA; (GenBank) DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D AB3G31_11985 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D AB3G31_00045 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D AB3G31_06370 exonuclease domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D AB3G31_09710 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D AB3G31_11130 dnaQ; (GenBank) DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D AB3G31_10045 dnaX; (GenBank) DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D AB3G31_05215 rnhB; (GenBank) ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D AB3G31_17165 polA; (GenBank) DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D AB3G31_12335 ligA; (GenBank) NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D AB3G31_07320 hda; (GenBank) DnaA regulatory inactivator Hda K10763 hda; DnaA-homolog protein
D AB3G31_05565 gyrA; (GenBank) DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D AB3G31_00015 gyrB; (GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D AB3G31_14355 parC; (GenBank) DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D AB3G31_14365 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D AB3G31_00085 DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:rhof03036]
D AB3G31_03905 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D AB3G31_04500 rnc; (GenBank) ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D AB3G31_18725 H-NS histone family protein K03746 hns; DNA-binding protein H-NS
D AB3G31_15445 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D AB3G31_08720 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D AB3G31_05535 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D AB3G31_15010 DnaJ C-terminal domain-containing protein K05516 cbpA; curved DNA-binding protein
D AB3G31_15015 chaperone modulator CbpM K18997 cbpM; chaperone modulatory protein CbpM
D AB3G31_00005 dnaA; (GenBank) chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D AB3G31_18355 Fis family transcriptional regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D AB3G31_09270 hfq; (GenBank) RNA chaperone Hfq K03666 hfq; host factor-I protein
D AB3G31_02165 HTH-type transcriptional regulator ArgP K05596 argP; LysR family transcriptional regulator, arginine and lysine transport system/DNA replication regulator
D AB3G31_21990 LysR family transcriptional regulator ArgP K05596 argP; LysR family transcriptional regulator, arginine and lysine transport system/DNA replication regulator
D AB3G31_01455 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D AB3G31_13580 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D AB3G31_14165 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D AB3G31_17915 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D AB3G31_19135 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D AB3G31_20815 Lrp/AsnC ligand binding domain-containing protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D AB3G31_12345 smc; (GenBank) chromosome segregation protein SMC K03529 smc; chromosome segregation protein
D AB3G31_05275 ScpA family protein K05896 scpA; segregation and condensation protein A
D AB3G31_09215 scpB; (GenBank) SMC-Scp complex subunit ScpB K06024 scpB; segregation and condensation protein B
D AB3G31_19550 ftsA; (GenBank) cell division protein FtsA K03590 ftsA; cell division protein FtsA
D AB3G31_13885 septum formation initiator family protein K05589 ftsB; cell division protein FtsB
D AB3G31_19600 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D AB3G31_15385 DNA translocase FtsK 4TM domain-containing protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D AB3G31_19605 ftsL; (GenBank) cell division protein FtsL K03586 ftsL; cell division protein FtsL
D AB3G31_19555 cell division protein FtsQ/DivIB K03589 ftsQ; cell division protein FtsQ
D AB3G31_19575 ftsW; (GenBank) putative lipid II flippase FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D AB3G31_19545 ftsZ; (GenBank) cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D AB3G31_14235 cell division protein ZapA K09888 zapA; cell division protein ZapA
D AB3G31_04330 zapD; (GenBank) cell division protein ZapD K18778 zapD; cell division protein ZapD
D AB3G31_14460 zapE; (GenBank) cell division protein ZapE K06916 zapE; cell division protein ZapE
D AB3G31_11425 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D AB3G31_12250 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D AB3G31_16280 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D AB3G31_21615 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D AB3G31_17800 minC; (GenBank) septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D AB3G31_17805 minD; (GenBank) septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D AB3G31_17810 minE; (GenBank) cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D AB3G31_20590 slmA; (GenBank) nucleoid occlusion factor SlmA K05501 slmA; TetR/AcrR family transcriptional regulator
D AB3G31_00995 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D AB3G31_01000 mreC; (GenBank) rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D AB3G31_01005 mreD; (GenBank) rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D AB3G31_02805 rodA; (GenBank) rod shape-determining protein RodA K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D AB3G31_00600 AAA family ATPase K03496 parA; chromosome partitioning protein
D AB3G31_06540 ParA family protein K03496 parA; chromosome partitioning protein
D AB3G31_18045 ParA family protein K03496 parA; chromosome partitioning protein
D AB3G31_00610 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D AB3G31_14355 parC; (GenBank) DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D AB3G31_14365 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D AB3G31_00585 mnmG; (GenBank) tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D AB3G31_00590 rsmG; (GenBank) 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D AB3G31_19665 tyrosine-type recombinase/integrase K03733 xerC; integrase/recombinase XerC
D AB3G31_11450 xerD; (GenBank) site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D AB3G31_05335 apbC; (GenBank) iron-sulfur cluster carrier protein ApbC K03593 mrp; ATP-binding protein involved in chromosome partitioning
D AB3G31_03300 yihA; (GenBank) ribosome biogenesis GTP-binding protein YihA/YsxC K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:rhof03400]
D AB3G31_11610 methylated-DNA--[protein]-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D AB3G31_07570 deoxyribodipyrimidine photo-lyase/cryptochrome family protein K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D AB3G31_07590 FAD-binding domain-containing protein K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D AB3G31_18280 deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D AB3G31_02765 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D AB3G31_03015 mutY; (GenBank) A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D AB3G31_13940 nth; (GenBank) endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D AB3G31_04320 NUDIX domain-containing protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D AB3G31_13860 dut; (GenBank) dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D AB3G31_07595 cryptochrome/photolyase family protein K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13]
D AB3G31_01730 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D AB3G31_09845 DNA-3-methyladenine glycosylase 2 family protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D AB3G31_11615 Ada metal-binding domain-containing protein K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D AB3G31_11875 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D AB3G31_03005 mutM; (GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D AB3G31_00965 exodeoxyribonuclease III K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2]
D AB3G31_16360 exodeoxyribonuclease III K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2]
D AB3G31_03635 recJ; (GenBank) single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D AB3G31_12335 ligA; (GenBank) NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D AB3G31_17165 polA; (GenBank) DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D AB3G31_19320 uvrA; (GenBank) excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D AB3G31_20535 uvrA; (GenBank) excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D AB3G31_11090 uvrB; (GenBank) excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D AB3G31_15455 uvrC; (GenBank) excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D AB3G31_04975 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D AB3G31_17905 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D AB3G31_02700 rpoC; (GenBank) DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D AB3G31_19900 rpoA; (GenBank) DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D AB3G31_04205 rpoZ; (GenBank) DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D AB3G31_09780 mfd; (GenBank) transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D AB3G31_15830 mutS; (GenBank) DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D AB3G31_10995 mutL; (GenBank) DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D AB3G31_10085 sbcB; (GenBank) exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D AB3G31_14645 xseA; (GenBank) exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D AB3G31_05045 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D AB3G31_11680 dnaE; (GenBank) DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D AB3G31_00010 dnaN; (GenBank) DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D AB3G31_10380 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D AB3G31_20270 holA; (GenBank) DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D AB3G31_11985 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D AB3G31_00045 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D AB3G31_06370 exonuclease domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D AB3G31_09710 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D AB3G31_11130 dnaQ; (GenBank) DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D AB3G31_10045 dnaX; (GenBank) DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D AB3G31_20525 ssb; (GenBank) single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D AB3G31_03910 very short patch repair endonuclease K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
D AB3G31_01605 recA; (GenBank) recombinase RecA K03553 recA; recombination protein RecA
D AB3G31_18800 ruvA; (GenBank) Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D AB3G31_18785 ruvB; (GenBank) Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D AB3G31_19530 ruvC; (GenBank) crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D AB3G31_02935 priA; (GenBank) primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D AB3G31_06495 priB; (GenBank) primosomal replication protein N K02686 priB; primosomal replication protein N
D AB3G31_00785 radA; (GenBank) DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D AB3G31_01380 recG; (GenBank) ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D AB3G31_04510 recO; (GenBank) DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D AB3G31_10055 recR; (GenBank) recombination mediator RecR K06187 recR; recombination protein RecR
D AB3G31_03025 recN; (GenBank) DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D AB3G31_00450 recombination-associated protein RdgC K03554 rdgC; recombination associated protein RdgC
D AB3G31_09980 UvrD-helicase domain-containing protein K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
D AB3G31_09960 PD-(D/E)XK nuclease family protein K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
D AB3G31_00125 cas1f; (GenBank) type I-F CRISPR-associated endonuclease Cas1f K15342 cas1; CRISP-associated protein Cas1
D AB3G31_10840 helicase HerA-like C-terminal domain-containing protein K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
D AB3G31_10660 Ku protein K10979 ku; DNA end-binding protein Ku
D AB3G31_10655 ligD; (GenBank) DNA ligase D K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D AB3G31_05565 gyrA; (GenBank) DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D AB3G31_00015 gyrB; (GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D AB3G31_15445 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D AB3G31_18355 Fis family transcriptional regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D AB3G31_08720 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D AB3G31_05535 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D AB3G31_21915 recQ; (GenBank) DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D AB3G31_18725 H-NS histone family protein K03746 hns; DNA-binding protein H-NS
D AB3G31_06660 dinB; (GenBank) DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D AB3G31_14685 lexA; (GenBank) transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D AB3G31_16715 imuA; (GenBank) translesion DNA synthesis-associated protein ImuA K14160 imuA; protein ImuA
D AB3G31_16710 DNA polymerase Y family protein K14161 imuB; protein ImuB
D AB3G31_16705 error-prone DNA polymerase K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
D AB3G31_01610 recX; (GenBank) recombination regulator RecX K03565 recX; regulatory protein
D AB3G31_01655 UvrD-helicase domain-containing protein K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4]
D AB3G31_15475 ATP-dependent helicase K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4]
D AB3G31_09200 ATP-dependent DNA helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D AB3G31_12450 dinG; (GenBank) ATP-dependent DNA helicase DinG K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D AB3G31_02875 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D AB3G31_02870 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:rhof03029]
D AB3G31_04275 cytochrome bc complex cytochrome b subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D AB3G31_11555 infB; (GenBank) translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D AB3G31_08695 infC; (GenBank) translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D AB3G31_05150 tsf; (GenBank) translation elongation factor Ts K02357 tsf; elongation factor Ts
D AB3G31_01190 tuf; (GenBank) elongation factor Tu K02358 tuf; elongation factor Tu
D AB3G31_02745 tuf; (GenBank) elongation factor Tu K02358 tuf; elongation factor Tu
D AB3G31_01185 fusA; (GenBank) elongation factor G K02355 fusA; elongation factor G
D AB3G31_01590 fusA; (GenBank) elongation factor G K02355 fusA; elongation factor G
D AB3G31_04505 era; (GenBank) GTPase Era K03595 era; GTPase
D AB3G31_18875 tyrS; (GenBank) tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D AB3G31_20280 leuS; (GenBank) leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D AB3G31_16655 aspS; (GenBank) aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D AB3G31_20150 argS; (GenBank) arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D AB3G31_00985 gatA; (GenBank) Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D AB3G31_05140 amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D AB3G31_00980 gatB; (GenBank) Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D AB3G31_00990 gatC; (GenBank) Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D AB3G31_20525 ssb; (GenBank) single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D AB3G31_05185 bamA; (GenBank) outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family
D AB3G31_14410 dnaK; (GenBank) molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D AB3G31_14405 grpE; (GenBank) nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D AB3G31_17430 groL; (GenBank) chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D AB3G31_17425 groES; (GenBank) co-chaperone GroES K04078 groES; chaperonin GroES
D AB3G31_14415 dnaJ; (GenBank) molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D AB3G31_11100 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D AB3G31_17650 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D AB3G31_11115 hscB; (GenBank) Fe-S protein assembly co-chaperone HscB K04082 hscB; molecular chaperone HscB
D AB3G31_00440 glutaredoxin K07390 grxD; monothiol glutaredoxin
D AB3G31_17385 grxD; (GenBank) Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin
D AB3G31_05335 apbC; (GenBank) iron-sulfur cluster carrier protein ApbC K03593 mrp; ATP-binding protein involved in chromosome partitioning
D AB3G31_17960 cyoE; (GenBank) heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
D AB3G31_17995 cytochrome c oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D AB3G31_17965 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D AB3G31_22155 yidC; (GenBank) membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D AB3G31_13210 SURF1 family protein K14998 SURF1; surfeit locus 1 family protein
D AB3G31_17975 SURF1 family protein K14998 SURF1; surfeit locus 1 family protein
D AB3G31_17955 SCO family protein K07152 SCO1; protein SCO1
D AB3G31_21150 htpG; (GenBank) molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:rhof02000]
D AB3G31_13310 msbA; (GenBank) lipid A export permease/ATP-binding protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D AB3G31_08315 peptidase domain-containing ABC transporter K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
D AB3G31_20670 ABC transporter ATP-binding protein/permease K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
D AB3G31_10875 ABC transporter ATP-binding protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D AB3G31_08665 ABC transporter transmembrane domain-containing protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D AB3G31_17780 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D AB3G31_16250 ATP-binding cassette domain-containing protein K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D AB3G31_16255 cydD; (GenBank) thiol reductant ABC exporter subunit CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D AB3G31_15865 ABC transporter permease K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D AB3G31_21505 MacB family efflux pump subunit K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D AB3G31_17765 ABC transporter ATP-binding protein/permease K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein
D AB3G31_02600 ATP-binding cassette domain-containing protein K15738 uup; ABC transport system ATP-binding/permease protein
D AB3G31_10190 sulfate ABC transporter substrate-binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D AB3G31_08750 sulfate ABC transporter substrate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D AB3G31_10195 cysT; (GenBank) sulfate ABC transporter permease subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D AB3G31_10200 cysW; (GenBank) sulfate ABC transporter permease subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D AB3G31_10205 sulfate ABC transporter ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D AB3G31_09635 substrate-binding domain-containing protein K02020 modA; molybdate transport system substrate-binding protein
D AB3G31_12045 modA; (GenBank) molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D AB3G31_12050 modB; (GenBank) molybdate ABC transporter permease subunit K02018 modB; molybdate transport system permease protein
D AB3G31_12040 ATP-binding cassette domain-containing protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D AB3G31_08965 CmpA/NrtA family ABC transporter substrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D AB3G31_08960 ntrB; (GenBank) nitrate ABC transporter permease K15577 nrtB; nitrate/nitrite transport system permease protein
D AB3G31_08955 ABC transporter ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D AB3G31_12385 tauA; (GenBank) taurine ABC transporter substrate-binding protein K15551 tauA; taurine transport system substrate-binding protein
D AB3G31_12395 ABC transporter permease subunit K15552 tauC; taurine transport system permease protein
D AB3G31_12390 ABC transporter ATP-binding protein K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7]
D AB3G31_08760 sulfonate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D AB3G31_08765 sulfonate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D AB3G31_08800 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D AB3G31_08830 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D AB3G31_10060 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D AB3G31_10140 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D AB3G31_10145 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D AB3G31_08780 ssuC; (GenBank) aliphatic sulfonate ABC transporter permease SsuC K15554 ssuC; sulfonate transport system permease protein
D AB3G31_08825 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein
D AB3G31_08785 ATP-binding cassette domain-containing protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D AB3G31_08820 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D AB3G31_00955 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D AB3G31_17475 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D AB3G31_20190 iron ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D AB3G31_00950 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D AB3G31_17470 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D AB3G31_20185 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D AB3G31_00945 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D AB3G31_17465 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D AB3G31_20180 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D AB3G31_10795 thiamine ABC transporter substrate-binding protein K02064 thiB; thiamine transport system substrate-binding protein
D AB3G31_10800 iron ABC transporter permease K02063 thiP; thiamine transport system permease protein
D AB3G31_13390 extracellular solute-binding protein K11073 potF; putrescine transport system substrate-binding protein
D AB3G31_13375 ABC transporter permease subunit K11074 potI; putrescine transport system permease protein
D AB3G31_13380 ABC transporter permease subunit K11075 potH; putrescine transport system permease protein
D AB3G31_13385 potA; (GenBank) polyamine ABC transporter ATP-binding protein K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16]
D AB3G31_00510 extracellular solute-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D AB3G31_09455 ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D AB3G31_10635 extracellular solute-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D AB3G31_16850 ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D AB3G31_18450 extracellular solute-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D AB3G31_00500 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D AB3G31_09440 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D AB3G31_16840 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D AB3G31_18440 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D AB3G31_00505 ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D AB3G31_09445 ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D AB3G31_16845 ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D AB3G31_18445 ABC transporter permease subunit K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D AB3G31_00515 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D AB3G31_09450 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D AB3G31_10805 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D AB3G31_16855 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D AB3G31_18435 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D AB3G31_16740 choX; (GenBank) choline ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D AB3G31_18185 glycine betaine ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D AB3G31_18255 choline ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D AB3G31_18230 proline/glycine betaine ABC transporter permease K02001 proW; glycine betaine/proline transport system permease protein
D AB3G31_18225 glycine betaine/L-proline ABC transporter ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D AB3G31_07620 ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D AB3G31_13490 ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D AB3G31_20475 ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D AB3G31_01525 ABC transporter permease subunit K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D AB3G31_07610 ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D AB3G31_13485 ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D AB3G31_20480 ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D AB3G31_20485 ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D AB3G31_01530 nitrate/sulfonate/bicarbonate ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D AB3G31_07615 ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D AB3G31_13480 ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D AB3G31_20490 ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D AB3G31_00365 ugpC; (GenBank) sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D AB3G31_00485 ugpC; (GenBank) sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D AB3G31_01040 ugpC; (GenBank) sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D AB3G31_05475 ugpC; (GenBank) sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D AB3G31_14755 ugpC; (GenBank) sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D AB3G31_16915 ugpC; (GenBank) sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D AB3G31_18685 ugpC; (GenBank) sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D AB3G31_19280 ugpC; (GenBank) sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D AB3G31_06980 ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D AB3G31_11075 ugpC; (GenBank) sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D AB3G31_16020 ugpC; (GenBank) sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D AB3G31_19480 ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D AB3G31_19500 ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D AB3G31_00350 extracellular solute-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D AB3G31_14740 ABC transporter substrate-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D AB3G31_00355 sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D AB3G31_14745 sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D AB3G31_00360 carbohydrate ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D AB3G31_14750 carbohydrate ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D AB3G31_06995 ABC transporter substrate-binding protein K17315 gtsA; glucose/mannose transport system substrate-binding protein
D AB3G31_14735 ABC transporter substrate-binding protein K17315 gtsA; glucose/mannose transport system substrate-binding protein
D AB3G31_19495 ABC transporter substrate-binding protein K17315 gtsA; glucose/mannose transport system substrate-binding protein
D AB3G31_19515 ABC transporter substrate-binding protein K17315 gtsA; glucose/mannose transport system substrate-binding protein
D AB3G31_06990 sugar ABC transporter permease K17316 gtsB; glucose/mannose transport system permease protein
D AB3G31_19490 sugar ABC transporter permease K17316 gtsB; glucose/mannose transport system permease protein
D AB3G31_19510 sugar ABC transporter permease K17316 gtsB; glucose/mannose transport system permease protein
D AB3G31_06985 carbohydrate ABC transporter permease K17317 gtsC; glucose/mannose transport system permease protein
D AB3G31_19485 carbohydrate ABC transporter permease K17317 gtsC; glucose/mannose transport system permease protein
D AB3G31_19505 carbohydrate ABC transporter permease K17317 gtsC; glucose/mannose transport system permease protein
D AB3G31_01425 ABC transporter substrate-binding protein K10236 thuE; trehalose/maltose transport system substrate-binding protein
D AB3G31_16025 ABC transporter substrate-binding protein K10236 thuE; trehalose/maltose transport system substrate-binding protein
D AB3G31_18700 ABC transporter substrate-binding protein K10236 thuE; trehalose/maltose transport system substrate-binding protein
D AB3G31_16030 sugar ABC transporter permease K10237 thuF; trehalose/maltose transport system permease protein
D AB3G31_18695 sugar ABC transporter permease K10237 thuF; trehalose/maltose transport system permease protein
D AB3G31_16035 carbohydrate ABC transporter permease K10238 thuG; trehalose/maltose transport system permease protein
D AB3G31_18690 carbohydrate ABC transporter permease K10238 thuG; trehalose/maltose transport system permease protein
D AB3G31_06400 extracellular solute-binding protein K10188 lacE; lactose/L-arabinose transport system substrate-binding protein
D AB3G31_06405 sugar ABC transporter permease K10189 lacF; lactose/L-arabinose transport system permease protein
D AB3G31_06410 carbohydrate ABC transporter permease K10190 lacG; lactose/L-arabinose transport system permease protein
D AB3G31_06420 ugpC; (GenBank) sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10191 lacK; lactose/L-arabinose transport system ATP-binding protein
D AB3G31_01025 extracellular solute-binding protein K17241 aguE; alpha-1,4-digalacturonate transport system substrate-binding protein
D AB3G31_01030 sugar ABC transporter permease K17242 aguF; alpha-1,4-digalacturonate transport system permease protein
D AB3G31_01035 carbohydrate ABC transporter permease K17243 aguG; alpha-1,4-digalacturonate transport system permease protein
D AB3G31_01625 sugar ABC transporter substrate-binding protein K10543 xylF; D-xylose transport system substrate-binding protein
D AB3G31_03255 xylF; (GenBank) D-xylose ABC transporter substrate-binding protein K10543 xylF; D-xylose transport system substrate-binding protein
D AB3G31_21755 xylF; (GenBank) D-xylose ABC transporter substrate-binding protein K10543 xylF; D-xylose transport system substrate-binding protein
D AB3G31_01615 sugar ABC transporter permease K10544 xylH; D-xylose transport system permease protein
D AB3G31_03260 ABC transporter permease K10544 xylH; D-xylose transport system permease protein
D AB3G31_21750 ABC transporter permease K10544 xylH; D-xylose transport system permease protein
D AB3G31_01620 ATP-binding cassette domain-containing protein K10545 xylG; D-xylose transport system ATP-binding protein [EC:7.5.2.10]
D AB3G31_03265 ATP-binding cassette domain-containing protein K10545 xylG; D-xylose transport system ATP-binding protein [EC:7.5.2.10]
D AB3G31_21745 ATP-binding cassette domain-containing protein K10545 xylG; D-xylose transport system ATP-binding protein [EC:7.5.2.10]
D AB3G31_06560 chvE; (GenBank) multiple monosaccharide ABC transporter substrate-binding protein K10546 chvE; putative multiple sugar transport system substrate-binding protein
D AB3G31_21000 chvE; (GenBank) multiple monosaccharide ABC transporter substrate-binding protein K10546 chvE; putative multiple sugar transport system substrate-binding protein
D AB3G31_06570 mmsB; (GenBank) multiple monosaccharide ABC transporter permease K10547 gguB; putative multiple sugar transport system permease protein
D AB3G31_06565 mmsA; (GenBank) multiple monosaccharide ABC transporter ATP-binding protein K10548 gguA; putative multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D AB3G31_08085 sugar ABC transporter substrate-binding protein K10552 frcB; fructose transport system substrate-binding protein
D AB3G31_08080 ABC transporter permease K10553 frcC; fructose transport system permease protein
D AB3G31_08075 ATP-binding cassette domain-containing protein K10554 frcA; fructose transport system ATP-binding protein
D AB3G31_07815 rhaS; (GenBank) rhamnose ABC transporter substrate-binding protein K10559 rhaS; rhamnose transport system substrate-binding protein
D AB3G31_07805 ABC transporter permease K10560 rhaP; rhamnose transport system permease protein
D AB3G31_07800 ABC transporter permease K10561 rhaQ; rhamnose transport system permease protein
D AB3G31_07810 sugar ABC transporter ATP-binding protein K10562 rhaT; rhamnose transport system ATP-binding protein [EC:7.5.2.-]
D AB3G31_03150 sugar ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D AB3G31_09575 ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D AB3G31_11220 substrate-binding domain-containing protein K10439 rbsB; ribose transport system substrate-binding protein
D AB3G31_03160 ABC transporter permease K10440 rbsC; ribose transport system permease protein
D AB3G31_03165 ABC transporter permease K10440 rbsC; ribose transport system permease protein
D AB3G31_09580 ABC transporter permease K10440 rbsC; ribose transport system permease protein
D AB3G31_11225 ABC transporter permease K10440 rbsC; ribose transport system permease protein
D AB3G31_03155 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D AB3G31_09585 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D AB3G31_11230 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D AB3G31_06555 ABC transporter substrate-binding protein K23508 ytfQ; galactofuranose transport system substrate-binding protein
D AB3G31_06580 ABC transporter permease K23509 ytfT; galactofuranose transport system permease protein
D AB3G31_06585 yjfF; (GenBank) galactofuranose ABC transporter, permease protein YjfF K23509 ytfT; galactofuranose transport system permease protein
D AB3G31_06575 sugar ABC transporter ATP-binding protein K10820 ytfR; galactofuranose transport system ATP-binding protein [EC:7.5.2.9]
D AB3G31_00680 sugar ABC transporter substrate-binding protein K17213 K17213; inositol transport system substrate-binding protein
D AB3G31_14900 sugar ABC transporter substrate-binding protein K17213 K17213; inositol transport system substrate-binding protein
D AB3G31_00675 ABC transporter permease K17214 K17214; inositol transport system permease protein
D AB3G31_14890 ABC transporter permease K17214 K17214; inositol transport system permease protein
D AB3G31_00670 sugar ABC transporter ATP-binding protein K17215 K17215; inositol transport system ATP-binding protein
D AB3G31_14895 sugar ABC transporter ATP-binding protein K17215 K17215; inositol transport system ATP-binding protein
D AB3G31_19990 ABC transporter substrate-binding protein K17321 glpV; glycerol transport system substrate-binding protein
D AB3G31_20005 sugar ABC transporter permease K17322 glpP; glycerol transport system permease protein
D AB3G31_20000 carbohydrate ABC transporter permease K17323 glpQ; glycerol transport system permease protein
D AB3G31_20015 ABC transporter ATP-binding protein K17324 glpS; glycerol transport system ATP-binding protein
D AB3G31_20010 ABC transporter ATP-binding protein K17325 glpT; glycerol transport system ATP-binding protein
D AB3G31_17340 ugpB; (GenBank) sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D AB3G31_17345 ugpA; (GenBank) sn-glycerol-3-phosphate ABC transporter permease UgpA K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D AB3G31_17350 ugpE; (GenBank) sn-glycerol-3-phosphate ABC transporter permease UgpE K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D AB3G31_17355 sn-glycerol-3-phosphate import ATP-binding protein UgpC K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D AB3G31_19295 sugar ABC transporter substrate-binding protein K10227 smoE; polyol transport system substrate-binding protein
D AB3G31_19290 sugar ABC transporter permease K10228 smoF; polyol transport system permease protein
D AB3G31_19285 carbohydrate ABC transporter permease K10229 smoG; polyol transport system permease protein
D AB3G31_08390 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D AB3G31_18920 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D AB3G31_19215 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D AB3G31_08380 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D AB3G31_18930 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D AB3G31_19210 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D AB3G31_08385 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D AB3G31_18935 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D AB3G31_19205 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D AB3G31_08375 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D AB3G31_18925 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D AB3G31_19195 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D AB3G31_03460 mlaD; (GenBank) outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D AB3G31_18815 MlaD family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D AB3G31_03455 mlaE; (GenBank) lipid asymmetry maintenance ABC transporter permease subunit MlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D AB3G31_18825 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D AB3G31_03450 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D AB3G31_18820 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D AB3G31_18810 ABC-type transport auxiliary lipoprotein family protein K18480 linN; cholesterol transport system auxiliary component
D AB3G31_03470 ABC transporter substrate-binding protein K07323 mlaC; phospholipid transport system substrate-binding protein
D AB3G31_03475 STAS domain-containing protein K07122 mlaB; phospholipid transport system transporter-binding protein
D AB3G31_00470 extracellular solute-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D AB3G31_05485 sugar ABC transporter substrate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D AB3G31_11060 extracellular solute-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D AB3G31_16895 extracellular solute-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D AB3G31_00475 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D AB3G31_05495 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D AB3G31_11070 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D AB3G31_16900 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D AB3G31_00480 carbohydrate ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D AB3G31_05490 carbohydrate ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D AB3G31_11065 carbohydrate ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D AB3G31_16905 carbohydrate ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D AB3G31_08440 sugar ABC transporter substrate-binding protein K02058 ABC.SS.S; simple sugar transport system substrate-binding protein
D AB3G31_08445 ABC transporter permease K02057 ABC.SS.P; simple sugar transport system permease protein
D AB3G31_08450 ATP-binding cassette domain-containing protein K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-]
D AB3G31_09905 pstS; (GenBank) phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D AB3G31_09910 pstC; (GenBank) phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D AB3G31_09915 pstA; (GenBank) phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D AB3G31_09920 pstB; (GenBank) phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D AB3G31_01805 putative selenate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D AB3G31_01785 phnE; (GenBank) phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein
D AB3G31_01790 ABC transporter permease K02042 phnE; phosphonate transport system permease protein
D AB3G31_01795 ATP-binding cassette domain-containing protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D AB3G31_08225 transporter substrate-binding domain-containing protein K10013 argT; lysine/arginine/ornithine transport system substrate-binding protein
D AB3G31_13550 amino acid ABC transporter substrate-binding protein K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D AB3G31_20640 amino acid ABC transporter substrate-binding protein K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D AB3G31_20630 amino acid ABC transporter permease K10002 gltK; glutamate/aspartate transport system permease protein
D AB3G31_20635 amino acid ABC transporter permease K10003 gltJ; glutamate/aspartate transport system permease protein
D AB3G31_20625 amino acid ABC transporter ATP-binding protein K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D AB3G31_07170 transporter substrate-binding domain-containing protein K02424 tcyA; L-cystine transport system substrate-binding protein
D AB3G31_07175 amino acid ABC transporter permease K10009 tcyB; L-cystine transport system permease protein
D AB3G31_13960 lysine/arginine/ornithine ABC transporter substrate-binding protein K10022 aotJ; arginine/ornithine transport system substrate-binding protein
D AB3G31_13970 ABC transporter permease subunit K10023 aotM; arginine/ornithine transport system permease protein
D AB3G31_13965 ABC transporter permease subunit K10024 aotQ; arginine/ornithine transport system permease protein
D AB3G31_13980 ATP-binding cassette domain-containing protein K10025 aotP; arginine/ornithine transport system ATP-binding protein [EC:7.4.2.1]
D AB3G31_03630 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D AB3G31_08990 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D AB3G31_09120 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D AB3G31_10120 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D AB3G31_10390 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D AB3G31_12375 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D AB3G31_15110 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D AB3G31_15495 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D AB3G31_21865 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D AB3G31_09115 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D AB3G31_10125 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D AB3G31_12110 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D AB3G31_12370 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D AB3G31_15090 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D AB3G31_15365 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D AB3G31_09110 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D AB3G31_10130 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D AB3G31_12105 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D AB3G31_12365 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D AB3G31_15095 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D AB3G31_15360 ABC transporter ATP-binding protein K01998 livM; branched-chain amino acid transport system permease protein
D AB3G31_09105 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D AB3G31_10110 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D AB3G31_12100 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D AB3G31_12360 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D AB3G31_15100 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D AB3G31_15355 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D AB3G31_09100 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D AB3G31_10115 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D AB3G31_12095 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D AB3G31_12355 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D AB3G31_15105 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D AB3G31_15350 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D AB3G31_15225 urtA; (GenBank) urea ABC transporter substrate-binding protein K11959 urtA; urea transport system substrate-binding protein
D AB3G31_15220 urtB; (GenBank) urea ABC transporter permease subunit UrtB K11960 urtB; urea transport system permease protein
D AB3G31_15215 urtC; (GenBank) urea ABC transporter permease subunit UrtC K11961 urtC; urea transport system permease protein
D AB3G31_15210 urtD; (GenBank) urea ABC transporter ATP-binding protein UrtD K11962 urtD; urea transport system ATP-binding protein
D AB3G31_15205 urtE; (GenBank) urea ABC transporter ATP-binding subunit UrtE K11963 urtE; urea transport system ATP-binding protein
D AB3G31_04865 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D AB3G31_07695 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D AB3G31_08265 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D AB3G31_08895 ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D AB3G31_09360 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D AB3G31_09625 basic amino acid ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D AB3G31_10335 ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D AB3G31_12310 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D AB3G31_13145 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D AB3G31_15890 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D AB3G31_16105 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D AB3G31_16625 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D AB3G31_18755 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D AB3G31_18765 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D AB3G31_08885 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D AB3G31_08890 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D AB3G31_09350 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D AB3G31_09355 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D AB3G31_09620 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D AB3G31_13150 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D AB3G31_08880 amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D AB3G31_09345 amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D AB3G31_13155 amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D AB3G31_07915 ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein
D AB3G31_07910 ABC transporter permease subunit K12369 dppB; dipeptide transport system permease protein
D AB3G31_07905 ABC transporter permease subunit K12370 dppC; dipeptide transport system permease protein
D AB3G31_07900 oligopeptide/dipeptide ABC transporter ATP-binding protein K12371 dppD; dipeptide transport system ATP-binding protein
D AB3G31_07895 peptide ABC transporter ATP-binding protein K12372 dppF; dipeptide transport system ATP-binding protein
D AB3G31_08515 gsiB; (GenBank) glutathione ABC transporter substrate-binding protein GsiB K13889 gsiB; glutathione transport system substrate-binding protein
D AB3G31_08520 gsiC; (GenBank) glutathione ABC transporter permease GsiC K13890 gsiC; glutathione transport system permease protein
D AB3G31_08525 gsiD; (GenBank) glutathione ABC transporter permease GsiD K13891 gsiD; glutathione transport system permease protein
D AB3G31_08510 dipeptide ABC transporter ATP-binding protein K13892 gsiA; glutathione transport system ATP-binding protein
D AB3G31_12300 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D AB3G31_21180 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D AB3G31_21555 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D AB3G31_12295 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D AB3G31_21175 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D AB3G31_21550 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D AB3G31_12290 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D AB3G31_21170 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D AB3G31_21545 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D AB3G31_12285 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D AB3G31_21165 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D AB3G31_21540 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D AB3G31_12280 ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D AB3G31_21535 ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D AB3G31_11525 extracellular solute-binding protein K13893 yejA; microcin C transport system substrate-binding protein
D AB3G31_11530 ABC transporter permease subunit K13894 yejB; microcin C transport system permease protein
D AB3G31_11535 ABC transporter permease K13895 yejE; microcin C transport system permease protein
D AB3G31_11540 dipeptide ABC transporter ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein
D AB3G31_14210 iron ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein
D AB3G31_14205 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D AB3G31_14215 helical backbone metal receptor K25034 btuF; cobalamin transport system substrate-binding protein
D AB3G31_12220 metal ABC transporter substrate-binding protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein
D AB3G31_12215 metal ABC transporter permease K02075 ABC.ZM.P; zinc/manganese transport system permease protein
D AB3G31_12210 metal ABC transporter ATP-binding protein K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein
D AB3G31_06845 ABC transporter permease K09690 wzm; homopolymeric O-antigen transport system permease protein
D AB3G31_06840 ABC transporter ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D AB3G31_10370 lptF; (GenBank) LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein
D AB3G31_10365 lptG; (GenBank) LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein
D AB3G31_20130 lptB; (GenBank) LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D AB3G31_03750 lipoprotein-releasing ABC transporter permease subunit K09808 lolC_E_F; lipoprotein-releasing system permease protein
D AB3G31_03755 lolD; (GenBank) lipoprotein-releasing ABC transporter ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D AB3G31_03485 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D AB3G31_04830 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D AB3G31_19660 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D AB3G31_03480 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D AB3G31_04820 ATP-binding cassette domain-containing protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D AB3G31_19655 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D AB3G31_05390 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein
D AB3G31_10920 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein
D AB3G31_09325 ATP-binding cassette domain-containing protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D AB3G31_10970 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D AB3G31_16960 bile acid:sodium symporter family protein K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D AB3G31_01070 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D AB3G31_10330 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D AB3G31_21440 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D AB3G31_06315 MFS family transporter K02625 pcaT; MFS transporter, MHS family, dicarboxylic acid transporter PcaT
D AB3G31_06080 aromatic acid/H+ symport family MFS transporter K08195 pcaK; MFS transporter, AAHS family, 4-hydroxybenzoate transporter
D AB3G31_05715 mhpT; (GenBank) 3-(3-hydroxy-phenyl)propionate transporter MhpT K05819 mhpT; MFS transporter, AAHS family, 3-hydroxyphenylpropionic acid transporter
D AB3G31_10460 MFS transporter K05548 benK; MFS transporter, AAHS family, benzoate transport protein
D AB3G31_14835 MFS transporter K05548 benK; MFS transporter, AAHS family, benzoate transport protein
D AB3G31_09140 MFS transporter K26744 vanK; MFS transporter, AAHS family, vanillate permease
D AB3G31_09775 MFS transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D AB3G31_21705 lplT; (GenBank) lysophospholipid transporter LplT K08227 lplT; MFS transporter, LPLT family, lysophospholipid transporter
D AB3G31_00880 AmpG family muropeptide MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D AB3G31_03280 multidrug effflux MFS transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D AB3G31_18425 multidrug effflux MFS transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D AB3G31_01360 MFS transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D AB3G31_05295 MFS transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D AB3G31_06950 MFS transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D AB3G31_08685 DHA2 family efflux MFS transporter permease subunit K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D AB3G31_00035 MFS transporter K08169 yebQ; MFS transporter, DHA2 family, multidrug resistance protein
D AB3G31_06975 MFS transporter K08222 yqgE; MFS transporter, YQGE family, putative transporter
D AB3G31_21065 ptsP; (GenBank) phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D AB3G31_21070 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D AB3G31_21075 PTS fructose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D AB3G31_20315 PTS sugar transporter subunit IIA K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D AB3G31_21155 aqpZ; (GenBank) aquaporin Z K06188 aqpZ; aquaporin Z
D AB3G31_14135 ion transporter K10716 kch; voltage-gated potassium channel
D AB3G31_21805 amt; (GenBank) ammonium transporter K03320 amt; ammonium transporter, Amt family
D AB3G31_00080 gstA; (GenBank) glutathione transferase GstA K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D AB3G31_00775 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D AB3G31_03205 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D AB3G31_06775 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D AB3G31_09680 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D AB3G31_13565 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D AB3G31_17280 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D AB3G31_18720 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D AB3G31_21660 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D AB3G31_04285 glutathione S-transferase N-terminal domain-containing protein K03599 sspA; stringent starvation protein A
D AB3G31_04095 Bax inhibitor-1/YccA family protein K19416 yccA; modulator of FtsH protease
D AB3G31_05330 Bax inhibitor-1/YccA family protein K19416 yccA; modulator of FtsH protease
D AB3G31_16875 formate/nitrite transporter family protein K21993 fdhC; formate transporter
D AB3G31_04265 mscL; (GenBank) large conductance mechanosensitive channel protein MscL K03282 mscL; large conductance mechanosensitive channel
D AB3G31_12425 DUF3772 domain-containing protein K05802 mscK; potassium-dependent mechanosensitive channel
D AB3G31_02415 motA; (GenBank) flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D AB3G31_02410 motB; (GenBank) flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D AB3G31_04125 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D AB3G31_14650 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D AB3G31_20290 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D AB3G31_04120 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD
D AB3G31_14655 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD
D AB3G31_20285 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD
D AB3G31_16510 tolQ; (GenBank) protein TolQ K03562 tolQ; biopolymer transport protein TolQ
D AB3G31_16515 tolR; (GenBank) protein TolR K03560 tolR; biopolymer transport protein TolR
D AB3G31_20325 magnesium and cobalt transport protein CorA K03284 corA; magnesium transporter
D AB3G31_00570 transporter K16074 zntB; zinc transporter
D AB3G31_00105 crcB; (GenBank) fluoride efflux transporter CrcB K06199 crcB; fluoride exporter
D AB3G31_10690 bestrophin family ion channel K08994 yneE; ion channel-forming bestrophin family protein
D AB3G31_07300 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D AB3G31_00525 carbohydrate porin K02024 lamB; maltoporin
D AB3G31_05570 ompA; (GenBank) outer membrane protein OmpA K03286 TC.OOP; OmpA-OmpF porin, OOP family
D AB3G31_04150 TonB-dependent receptor K16090 fiu; catecholate siderophore receptor
D AB3G31_14225 TonB-dependent receptor K16092 btuB; vitamin B12 transporter
D AB3G31_12270 TolC family outer membrane protein K12340 tolC; outer membrane protein
D AB3G31_08275 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D AB3G31_08675 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D AB3G31_16270 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D AB3G31_21510 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D AB3G31_21610 efflux transporter outer membrane subunit K18904 nodT; outer membrane protein, multidrug efflux system
D AB3G31_07455 epsE; (GenBank) polysaccharide export protein EpsE K01991 wza; polysaccharide biosynthesis/export protein
D AB3G31_17065 XrtA/PEP-CTERM system exopolysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D AB3G31_05185 bamA; (GenBank) outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family
D AB3G31_09260 bamB; (GenBank) outer membrane protein assembly factor BamB K17713 bamB; outer membrane protein assembly factor BamB
D AB3G31_14380 bamC; (GenBank) outer membrane protein assembly factor BamC K07287 bamC; outer membrane protein assembly factor BamC
D AB3G31_09205 outer membrane protein assembly factor BamD K05807 bamD; outer membrane protein assembly factor BamD
D AB3G31_20300 outer membrane protein assembly factor BamE K06186 bamE; outer membrane protein assembly factor BamE
D AB3G31_18085 autotransporter assembly complex family protein K07278 tamA; translocation and assembly module TamA
D AB3G31_18090 translocation/assembly module TamB domain-containing protein K09800 tamB; translocation and assembly module TamB
D AB3G31_20135 lptA; (GenBank) lipopolysaccharide transport periplasmic protein LptA K09774 lptA; lipopolysaccharide export system protein LptA
D AB3G31_22115 lptC; (GenBank) LPS export ABC transporter periplasmic protein LptC K11719 lptC; lipopolysaccharide export system protein LptC
D AB3G31_22055 LPS-assembly protein LptD K04744 lptD; LPS-assembly protein
D AB3G31_20275 lptE; (GenBank) LPS assembly lipoprotein LptE K03643 lptE; LPS-assembly lipoprotein
D AB3G31_19120 transporter associated domain-containing protein K06189 corC; hemolysin (HlyC) family protein
D AB3G31_16595 CidA/LrgA family protein K06518 cidA; holin-like protein
D AB3G31_00405 amino acid permease K28029 UGA4; amino acid or GABA permease
D AB3G31_17295 ZIP family metal transporter K16267 zipB; zinc and cadmium transporter
D AB3G31_07260 efflux RND transporter permease subunit K18303 mexK; multidrug efflux pump
D AB3G31_12255 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D AB3G31_16275 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D AB3G31_21620 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D AB3G31_09695 efflux RND transporter permease subunit K07788 mdtB; multidrug efflux pump
D AB3G31_06425 SMR family transporter K03297 emrE; small multidrug resistance pump
D AB3G31_15165 EamA family transporter K15268 eamA; O-acetylserine/cysteine efflux transporter
D AB3G31_08355 EamA family transporter K03298 TC.DME; drug/metabolite transporter, DME family
D AB3G31_14170 DMT family transporter K11939 rhtA; inner membrane transporter RhtA
D AB3G31_00270 rarD; (GenBank) EamA family transporter RarD K05786 rarD; chloramphenicol-sensitive protein RarD
D AB3G31_06485 VC_2705 family sodium/solute symporter K14393 actP; cation/acetate symporter
D AB3G31_19350 cation acetate symporter K14393 actP; cation/acetate symporter
D AB3G31_08135 dicarboxylate/amino acid:cation symporter K11103 dctA; aerobic C4-dicarboxylate transport protein
D AB3G31_11000 dctA; (GenBank) C4-dicarboxylate transporter DctA K11103 dctA; aerobic C4-dicarboxylate transport protein
D AB3G31_18055 kefC; (GenBank) glutathione-regulated potassium-efflux system protein KefC K11745 kefC; glutathione-regulated potassium-efflux system protein KefC
D AB3G31_18050 NAD(P)H-dependent oxidoreductase K11746 kefF; glutathione-regulated potassium-efflux system ancillary protein KefF
D AB3G31_22130 monovalent cation:proton antiporter-2 (CPA2) family protein K03455 KEA1_2_3; K+:H+ antiporter
D AB3G31_11400 ybaL; (GenBank) YbaL family putative K(+) efflux transporter K26735 KEA4_5_6; K+:H+ antiporter
D AB3G31_19710 cation:proton antiporter K26731 CHX; K+:H+ antiporter
D AB3G31_17925 nucleobase:cation symporter-2 family protein K24206 uacT; uric acid transporter
D AB3G31_14840 benzoate/H(+) symporter BenE family transporter K05782 benE; benzoate membrane transport protein
D AB3G31_20220 benzoate/H(+) symporter BenE family transporter K05782 benE; benzoate membrane transport protein
D AB3G31_15930 chloride channel protein K03281 clcA; chloride channel protein, CIC family
D AB3G31_06465 chrA; (GenBank) chromate efflux transporter K07240 chrA; chromate transporter
D AB3G31_10700 chromate transporter K07240 chrA; chromate transporter
D AB3G31_10705 chromate transporter K07240 chrA; chromate transporter
D AB3G31_12490 chromate transporter K07240 chrA; chromate transporter
D AB3G31_12495 chromate transporter K07240 chrA; chromate transporter
D AB3G31_05300 SulP family inorganic anion transporter K03321 TC.SULP; sulfate permease, SulP family
D AB3G31_07715 SulP family inorganic anion transporter K03321 TC.SULP; sulfate permease, SulP family
D AB3G31_05060 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D AB3G31_05825 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D AB3G31_05985 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D AB3G31_07115 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D AB3G31_09420 sialic acid TRAP transporter substrate-binding protein SiaP K11688 dctP; TRAP-type transport system periplasmic protein
D AB3G31_10600 DctP family TRAP transporter solute-binding subunit K11688 dctP; TRAP-type transport system periplasmic protein
D AB3G31_13350 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D AB3G31_14115 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D AB3G31_19000 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D AB3G31_05075 TRAP transporter small permease subunit K11689 dctQ; TRAP-type transport system small permease protein
D AB3G31_05820 TRAP transporter small permease K11689 dctQ; TRAP-type transport system small permease protein
D AB3G31_05980 TRAP transporter small permease subunit K11689 dctQ; TRAP-type transport system small permease protein
D AB3G31_07125 TRAP transporter small permease subunit K11689 dctQ; TRAP-type transport system small permease protein
D AB3G31_09415 TRAP transporter small permease K11689 dctQ; TRAP-type transport system small permease protein
D AB3G31_10590 TRAP transporter small permease K11689 dctQ; TRAP-type transport system small permease protein
D AB3G31_14105 TRAP transporter small permease K11689 dctQ; TRAP-type transport system small permease protein
D AB3G31_18995 TRAP transporter small permease K11689 dctQ; TRAP-type transport system small permease protein
D AB3G31_05070 TRAP transporter large permease subunit K11690 dctM; TRAP-type transport system large permease protein
D AB3G31_05815 TRAP transporter large permease K11690 dctM; TRAP-type transport system large permease protein
D AB3G31_05975 TRAP transporter large permease subunit K11690 dctM; TRAP-type transport system large permease protein
D AB3G31_07120 TRAP transporter large permease subunit K11690 dctM; TRAP-type transport system large permease protein
D AB3G31_09410 TRAP transporter large permease K11690 dctM; TRAP-type transport system large permease protein
D AB3G31_10595 TRAP transporter large permease K11690 dctM; TRAP-type transport system large permease protein
D AB3G31_14110 TRAP transporter large permease subunit K11690 dctM; TRAP-type transport system large permease protein
D AB3G31_18990 TRAP transporter large permease subunit K11690 dctM; TRAP-type transport system large permease protein
D AB3G31_04770 Na/Pi cotransporter family protein K03324 yjbB; phosphate:Na+ symporter
D AB3G31_08850 arsA; (GenBank) arsenical pump-driving ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D AB3G31_16755 murJ; (GenBank) murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D AB3G31_10765 AEC family transporter K13936 mdcF; malonate transporter and related proteins
D AB3G31_11440 AEC family transporter K13936 mdcF; malonate transporter and related proteins
D AB3G31_14130 AEC family transporter K13936 mdcF; malonate transporter and related proteins
D AB3G31_20255 potassium transporter Kup K03549 kup; KUP system potassium uptake protein
D AB3G31_02170 LysE family transporter K06895 lysE; L-lysine exporter family protein LysE/ArgO
D AB3G31_02090 LysE family translocator K05834 rhtB; homoserine/homoserine lactone efflux protein
D AB3G31_12435 LysE family translocator K05834 rhtB; homoserine/homoserine lactone efflux protein
D AB3G31_05505 LysE family transporter K05835 rhtC; threonine efflux protein
D AB3G31_00595 LysE family transporter K11250 leuE; leucine efflux protein
D AB3G31_01510 AzlC family ABC transporter permease K26605 azlC; branched chain amino acid efflux pump
D AB3G31_01515 AzlD domain-containing protein K26606 azlD; branched chain amino acid efflux pump
D AB3G31_03805 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D AB3G31_13595 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D AB3G31_03800 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein
D AB3G31_13600 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein
D AB3G31_02030 tripartite tricarboxylate transporter substrate-binding protein K07795 tctC; putative tricarboxylic transport membrane protein
D AB3G31_05810 tripartite tricarboxylate transporter substrate binding protein K07795 tctC; putative tricarboxylic transport membrane protein
D AB3G31_13605 tripartite tricarboxylate transporter substrate-binding protein K07795 tctC; putative tricarboxylic transport membrane protein
D AB3G31_19575 ftsW; (GenBank) putative lipid II flippase FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D AB3G31_14390 TMEM165/GDT1 family protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D AB3G31_12925 carbon starvation CstA family protein K06200 cstA; carbon starvation protein
D AB3G31_01290 energy transducer TonB K03832 tonB; periplasmic protein TonB
D AB3G31_02785 TonB family protein K03832 tonB; periplasmic protein TonB
D AB3G31_04130 TonB family protein K03832 tonB; periplasmic protein TonB
D AB3G31_07655 hypothetical protein K03832 tonB; periplasmic protein TonB
D AB3G31_13295 pal; (GenBank) peptidoglycan-associated lipoprotein Pal K03640 pal; peptidoglycan-associated lipoprotein
D AB3G31_16520 tolA; (GenBank) cell envelope integrity protein TolA K03646 tolA; colicin import membrane protein
D AB3G31_13300 tolB; (GenBank) Tol-Pal system beta propeller repeat protein TolB K03641 tolB; TolB protein
D AB3G31_13660 sodium-translocating pyrophosphatase K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1]
D AB3G31_21350 mdcA; (GenBank) malonate decarboxylase subunit alpha K13929 mdcA; malonate decarboxylase alpha subunit [EC:2.3.1.187]
D AB3G31_21345 mdcC; (GenBank) malonate decarboxylase acyl carrier protein K13931 mdcC; malonate decarboxylase delta subunit
D AB3G31_08680 efflux RND transporter periplasmic adaptor subunit K03543 emrA; membrane fusion protein, multidrug efflux system
D AB3G31_08310 HlyD family type I secretion periplasmic adaptor subunit K11003 hlyD; membrane fusion protein, hemolysin D
D AB3G31_07255 efflux RND transporter periplasmic adaptor subunit K18302 mexJ; membrane fusion protein, multidrug efflux system
D AB3G31_12250 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D AB3G31_16280 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D AB3G31_21615 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D AB3G31_09690 efflux RND transporter periplasmic adaptor subunit K07799 mdtA; membrane fusion protein, multidrug efflux system
D AB3G31_21500 efflux RND transporter periplasmic adaptor subunit K13888 macA; membrane fusion protein, macrolide-specific efflux system
D AB3G31_07445 epsG; (GenBank) chain length determinant protein tyrosine kinase EpsG K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D AB3G31_17055 XrtA-associated tyrosine autokinase K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D AB3G31_07450 epsF; (GenBank) chain length determinant protein EpsF K25590 epsF; protein tyrosine kinase modulator
D AB3G31_17060 XrtA system polysaccharide chain length determinant K25590 epsF; protein tyrosine kinase modulator
D AB3G31_20860 BON domain-containing protein K28369 dolP; outer membrane lipoprotein DolP
D AB3G31_17620 paraquat-inducible protein A K03808 pqiA; intermembrane transport protein PqiA/LetA
D AB3G31_17625 paraquat-inducible protein A K03808 pqiA; intermembrane transport protein PqiA/LetA
D AB3G31_17630 MlaD family protein K06192 pqiB; intermembrane transport protein PqiB/LetB
D AB3G31_13625 hypothetical protein K09857 pqiC; intermembrane transport lipoprotein PqiC
D AB3G31_17635 PqiC family protein K09857 pqiC; intermembrane transport lipoprotein PqiC
D AB3G31_04640 entericidin A/B family lipoprotein K16347 ecnA; entericidin A
D AB3G31_07650 uraH; (GenBank) hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
C 02044 Secretion system [BR:rhof02044]
D AB3G31_08315 peptidase domain-containing ABC transporter K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
D AB3G31_08310 HlyD family type I secretion periplasmic adaptor subunit K11003 hlyD; membrane fusion protein, hemolysin D
D AB3G31_12270 TolC family outer membrane protein K12340 tolC; outer membrane protein
D AB3G31_17700 type II secretion system protein N K02452 gspC; general secretion pathway protein C
D AB3G31_17745 gspD; (GenBank) type II secretion system secretin GspD K02453 gspD; general secretion pathway protein D
D AB3G31_03795 ATPase, T2SS/T4P/T4SS family K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D AB3G31_17750 ATPase, T2SS/T4P/T4SS family K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D AB3G31_17755 gspF; (GenBank) type II secretion system inner membrane protein GspF K02455 gspF; general secretion pathway protein F
D AB3G31_17705 gspG; (GenBank) type II secretion system major pseudopilin GspG K02456 gspG; general secretion pathway protein G
D AB3G31_17710 type II secretion system protein GspH K02457 gspH; general secretion pathway protein H
D AB3G31_17715 gspI; (GenBank) type II secretion system minor pseudopilin GspI K02458 gspI; general secretion pathway protein I
D AB3G31_17720 prepilin-type N-terminal cleavage/methylation domain-containing protein K02459 gspJ; general secretion pathway protein J
D AB3G31_17725 gspK; (GenBank) type II secretion system minor pseudopilin GspK K02460 gspK; general secretion pathway protein K
D AB3G31_17730 gspL; (GenBank) type II secretion system protein GspL K02461 gspL; general secretion pathway protein L
D AB3G31_17735 gspM; (GenBank) type II secretion system protein GspM K02462 gspM; general secretion pathway protein M
D AB3G31_17740 gspN; (GenBank) type II secretion system protein N K02463 gspN; general secretion pathway protein N
D AB3G31_04340 A24 family peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D AB3G31_01930 pilin K02650 pilA; type IV pilus assembly protein PilA
D AB3G31_04350 pilB; (GenBank) type IV-A pilus assembly ATPase PilB K02652 pilB; type IV pilus assembly protein PilB
D AB3G31_04345 type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC
D AB3G31_16470 type IV pilin protein K02655 pilE; type IV pilus assembly protein PilE
D AB3G31_09235 pilW; (GenBank) type IV pilus biogenesis/stability protein PilW K02656 pilF; type IV pilus assembly protein PilF
D AB3G31_18305 response regulator K02657 pilG; twitching motility two-component system response regulator PilG
D AB3G31_18300 response regulator K02658 pilH; twitching motility two-component system response regulator PilH
D AB3G31_18295 chemotaxis protein CheW K02659 pilI; twitching motility protein PilI
D AB3G31_18290 methyl-accepting chemotaxis protein K02660 pilJ; twitching motility protein PilJ
D AB3G31_03355 pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
D AB3G31_03360 PilN domain-containing protein K02663 pilN; type IV pilus assembly protein PilN
D AB3G31_03365 type 4a pilus biogenesis protein PilO K02664 pilO; type IV pilus assembly protein PilO
D AB3G31_03370 pilus assembly protein PilP K02665 pilP; type IV pilus assembly protein PilP
D AB3G31_03375 type IV pilus secretin PilQ K02666 pilQ; type IV pilus assembly protein PilQ
D AB3G31_20840 type IV pilus twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D AB3G31_07305 PilT/PilU family type 4a pilus ATPase K02670 pilU; twitching motility protein PilU
D AB3G31_13120 PilT/PilU family type 4a pilus ATPase K02670 pilU; twitching motility protein PilU
D AB3G31_20850 PilT/PilU family type 4a pilus ATPase K02670 pilU; twitching motility protein PilU
D AB3G31_16450 pilV; (GenBank) type IV pilus modification protein PilV K02671 pilV; type IV pilus assembly protein PilV
D AB3G31_16455 PilW family protein K02672 pilW; type IV pilus assembly protein PilW
D AB3G31_16460 PilX N-terminal domain-containing pilus assembly protein K02673 pilX; type IV pilus assembly protein PilX
D AB3G31_16465 PilC/PilY family type IV pilus protein K02674 pilY1; type IV pilus assembly protein PilY1
D AB3G31_11980 PilZ domain-containing protein K02676 pilZ; type IV pilus assembly protein PilZ
D AB3G31_16445 GspH/FimT family pseudopilin K08084 fimT; type IV fimbrial biogenesis protein FimT
D AB3G31_04620 FimV/HubP family polar landmark protein K08086 fimV; pilus assembly protein FimV
D AB3G31_04590 YggT family protein K02221 yggT; YggT family protein
D AB3G31_05925 helix-hairpin-helix domain-containing protein K02237 comEA; competence protein ComEA
D AB3G31_14325 DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC
D AB3G31_02390 flhA; (GenBank) flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D AB3G31_02395 EscU/YscU/HrcU family type III secretion system export apparatus switch protein K02401 flhB; flagellar biosynthesis protein FlhB
D AB3G31_02490 fliF; (GenBank) flagellar basal-body MS-ring/collar protein FliF K02409 fliF; flagellar M-ring protein FliF
D AB3G31_02500 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D AB3G31_02505 fliI; (GenBank) flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D AB3G31_02530 fliN; (GenBank) flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D AB3G31_02535 flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D AB3G31_02540 fliP; (GenBank) flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D AB3G31_02545 fliQ; (GenBank) flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D AB3G31_02550 fliR; (GenBank) flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D AB3G31_16190 type IV secretion system protein K03201 virB6; type IV secretion system protein VirB6
D AB3G31_18400 DsbC family protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D AB3G31_04305 secA; (GenBank) preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D AB3G31_21780 hypothetical protein K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D AB3G31_07745 secB; (GenBank) protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D AB3G31_01470 secD; (GenBank) protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D AB3G31_02735 secE; (GenBank) preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D AB3G31_01475 secF; (GenBank) protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D AB3G31_08560 secG; (GenBank) preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D AB3G31_19925 secY; (GenBank) preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D AB3G31_02905 ffh; (GenBank) signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D AB3G31_18565 ftsY; (GenBank) signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D AB3G31_01465 yajC; (GenBank) preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D AB3G31_22155 yidC; (GenBank) membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D AB3G31_04235 tatA; (GenBank) Sec-independent protein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA
D AB3G31_04240 tatB; (GenBank) Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D AB3G31_04245 tatC; (GenBank) twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:rhof02042]
D AB3G31_03095 zonular occludens toxin domain-containing protein K10954 zot; zona occludens toxin
D AB3G31_07300 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D AB3G31_12015 hemolysin III family protein K11068 hlyIII; hemolysin III
D AB3G31_13995 phosphocholine-specific phospholipase C K01114 plc; phospholipase C [EC:3.1.4.3]
C 02022 Two-component system [BR:rhof02022]
D AB3G31_09935 phoR; (GenBank) phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D AB3G31_09930 phoB; (GenBank) phosphate regulon transcriptional regulator PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D AB3G31_09795 ATP-binding protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D AB3G31_09800 ompR; (GenBank) two-component system response regulator OmpR K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D AB3G31_07075 creC; (GenBank) two-component system sensor histidine kinase CreC K07641 creC; two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3]
D AB3G31_07080 creB; (GenBank) two-component system response regulator CreB K07663 creB; two-component system, OmpR family, catabolic regulation response regulator CreB
D AB3G31_00815 ATP-binding protein K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D AB3G31_00810 response regulator K07666 qseB; two-component system, OmpR family, response regulator QseB
D AB3G31_21295 DUF4118 domain-containing protein K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D AB3G31_21290 kdpE; (GenBank) two-component system response regulator KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D AB3G31_13615 sensor histidine kinase N-terminal domain-containing protein K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D AB3G31_13610 response regulator transcription factor K07774 tctD; two-component system, OmpR family, response regulator TctD
D AB3G31_03525 ATP-binding protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D AB3G31_01595 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator
D AB3G31_03530 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator
D AB3G31_04940 response regulator K02483 K02483; two-component system, OmpR family, response regulator
D AB3G31_06025 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator
D AB3G31_14730 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator
D AB3G31_19410 response regulator K02483 K02483; two-component system, OmpR family, response regulator
D AB3G31_02555 response regulator transcription factor K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D AB3G31_04805 response regulator transcription factor K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D AB3G31_12920 cache domain-containing protein K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3]
D AB3G31_03565 histidine kinase K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3]
D AB3G31_03570 LytTR family DNA-binding domain-containing protein K08083 algR; two-component system, LytTR family, response regulator AlgR
D AB3G31_16375 glnL; (GenBank) nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D AB3G31_16370 ntrC; (GenBank) nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D AB3G31_02680 ATP-binding protein K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D AB3G31_02675 response regulator K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D AB3G31_02890 HAMP domain-containing sensor histidine kinase K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D AB3G31_02885 sigma-54 dependent transcriptional regulator K02667 pilR; two-component system, NtrC family, response regulator PilR
D AB3G31_10270 ATP-binding protein K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
D AB3G31_10260 sigma 54-interacting transcriptional regulator K07715 glrR; two-component system, NtrC family, response regulator GlrR
D AB3G31_05790 ATP-binding protein K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D AB3G31_05805 ATP-binding protein K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D AB3G31_10720 ATP-binding protein K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D AB3G31_17405 prsR; (GenBank) PEP-CTERM-box response regulator transcription factor K02481 flgR; two-component system, NtrC family, response regulator
D AB3G31_02575 chemotaxis protein CheW K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D AB3G31_02405 cheY; (GenBank) chemotaxis response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D AB3G31_02570 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D AB3G31_08940 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D AB3G31_02595 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D AB3G31_16310 chemotaxis protein CheB K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D AB3G31_20685 chemotaxis protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D AB3G31_18285 Hpt domain-containing protein K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D AB3G31_18305 response regulator K02657 pilG; twitching motility two-component system response regulator PilG
D AB3G31_18300 response regulator K02658 pilH; twitching motility two-component system response regulator PilH
D AB3G31_15910 response regulator K11443 divK; two-component system, cell cycle response regulator DivK
D AB3G31_19005 PAS domain S-box protein K11711 dctS; two-component system, LuxR family, sensor histidine kinase DctS [EC:2.7.13.3]
D AB3G31_21590 PAS domain S-box protein K11711 dctS; two-component system, LuxR family, sensor histidine kinase DctS [EC:2.7.13.3]
D AB3G31_19010 response regulator K11712 dctR; two-component system, LuxR family, response regulator DctR
D AB3G31_21585 response regulator K11712 dctR; two-component system, LuxR family, response regulator DctR
D AB3G31_01130 HD domain-containing phosphohydrolase K13815 rpfG; two-component system, response regulator RpfG
D AB3G31_13215 ATP-binding protein K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D AB3G31_13220 response regulator transcription factor K15012 regA; two-component system, response regulator RegA
D AB3G31_20090 ATP-binding protein K19621 phcS; two-component system, sensor histidine kinase PhcS [EC:2.7.13.3]
D AB3G31_20085 hybrid sensor histidine kinase/response regulator K19622 phcR; two-component system, response regulator PhcR
D AB3G31_20080 response regulator K19623 phcQ; two-component system, probable response regulator PhcQ
D AB3G31_01085 response regulator K22010 pdtaR; two-component system, response regulator PdtaR
D AB3G31_14865 response regulator K22010 pdtaR; two-component system, response regulator PdtaR
D AB3G31_08975 ANTAR domain-containing protein K07183 nasT; two-component system, response regulator / RNA-binding antiterminator
D AB3G31_00735 ATP-binding protein K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
D AB3G31_15530 response regulator K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
D AB3G31_15885 ATP-binding protein K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
C 02035 Bacterial motility proteins [BR:rhof02035]
D AB3G31_02575 chemotaxis protein CheW K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D AB3G31_02580 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D AB3G31_06925 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D AB3G31_10930 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D AB3G31_14875 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D AB3G31_11385 chemotaxis protein CheC K03410 cheC; chemotaxis protein CheC
D AB3G31_02590 cheD; (GenBank) chemoreceptor glutamine deamidase CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D AB3G31_02585 CheR family methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D AB3G31_02595 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D AB3G31_16310 chemotaxis protein CheB K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D AB3G31_02405 cheY; (GenBank) chemotaxis response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D AB3G31_02570 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D AB3G31_08940 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D AB3G31_02400 protein phosphatase CheZ K03414 cheZ; chemotaxis protein CheZ
D AB3G31_20685 chemotaxis protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D AB3G31_01570 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AB3G31_02910 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AB3G31_02915 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AB3G31_03615 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AB3G31_03980 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AB3G31_06920 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AB3G31_09135 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AB3G31_09480 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AB3G31_10935 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AB3G31_11675 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AB3G31_11925 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AB3G31_12405 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AB3G31_13920 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AB3G31_14055 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AB3G31_14350 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AB3G31_14880 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AB3G31_15835 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AB3G31_17335 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AB3G31_20560 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AB3G31_20715 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AB3G31_11155 methyl-accepting chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D AB3G31_17290 methyl-accepting chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D AB3G31_12165 methyl-accepting chemotaxis protein K05875 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor
D AB3G31_12400 methyl-accepting chemotaxis protein K05875 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor
D AB3G31_01080 methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor
D AB3G31_02920 methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor
D AB3G31_15995 methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor
D AB3G31_02500 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D AB3G31_02505 fliI; (GenBank) flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D AB3G31_02510 fliJ; (GenBank) flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ
D AB3G31_02535 flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D AB3G31_02540 fliP; (GenBank) flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D AB3G31_02545 fliQ; (GenBank) flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D AB3G31_02550 fliR; (GenBank) flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D AB3G31_02390 flhA; (GenBank) flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D AB3G31_02395 EscU/YscU/HrcU family type III secretion system export apparatus switch protein K02401 flhB; flagellar biosynthesis protein FlhB
D AB3G31_02495 fliG; (GenBank) flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D AB3G31_02525 fliM; (GenBank) flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D AB3G31_02530 fliN; (GenBank) flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D AB3G31_02490 fliF; (GenBank) flagellar basal-body MS-ring/collar protein FliF K02409 fliF; flagellar M-ring protein FliF
D AB3G31_02320 flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D AB3G31_02360 flgA; (GenBank) flagellar basal body P-ring formation chaperone FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D AB3G31_02325 flagellar basal body L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D AB3G31_21985 flagellar basal body L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D AB3G31_02520 flagellar basal body-associated FliL family protein K02415 fliL; flagellar protein FliL
D AB3G31_02485 fliE; (GenBank) flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D AB3G31_02515 flagellar hook-length control protein FliK K02414 fliK; flagellar hook-length control protein FliK
D AB3G31_02355 flgB; (GenBank) flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D AB3G31_02350 flgC; (GenBank) flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D AB3G31_02345 flagellar hook capping FlgD N-terminal domain-containing protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D AB3G31_02335 flagellar basal body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D AB3G31_02330 flgG; (GenBank) flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D AB3G31_02315 glucosaminidase domain-containing protein K02395 flgJ; peptidoglycan hydrolase FlgJ
D AB3G31_02340 flgE; (GenBank) flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D AB3G31_02310 flgK; (GenBank) flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D AB3G31_02305 flgL; (GenBank) flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D AB3G31_02460 flagellin K02406 fliC; flagellin
D AB3G31_02465 flagellin K02406 fliC; flagellin
D AB3G31_02470 fliD; (GenBank) flagellar filament capping protein FliD K02407 fliD; flagellar hook-associated protein 2
D AB3G31_02475 fliS; (GenBank) flagellar export chaperone FliS K02422 fliS; flagellar secretion chaperone FliS
D AB3G31_02480 flagellar protein FliT K02423 fliT; flagellar protein FliT
D AB3G31_07755 flhD; (GenBank) flagellar transcriptional regulator FlhD K02403 flhD; flagellar transcriptional activator FlhD
D AB3G31_07760 flhC; (GenBank) flagellar transcriptional regulator FlhC K02402 flhC; flagellar transcriptional activator FlhC
D AB3G31_02375 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
D AB3G31_02415 motA; (GenBank) flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D AB3G31_02410 motB; (GenBank) flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D AB3G31_07170 transporter substrate-binding domain-containing protein K02424 tcyA; L-cystine transport system substrate-binding protein
D AB3G31_02365 flgM; (GenBank) flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D AB3G31_02385 flhF; (GenBank) flagellar biosynthesis protein FlhF K02404 flhF; flagellar biosynthesis protein FlhF
D AB3G31_07705 MinD/ParA family protein K04562 flhG; flagellar biosynthesis protein FlhG
D AB3G31_18305 response regulator K02657 pilG; twitching motility two-component system response regulator PilG
D AB3G31_18300 response regulator K02658 pilH; twitching motility two-component system response regulator PilH
D AB3G31_18295 chemotaxis protein CheW K02659 pilI; twitching motility protein PilI
D AB3G31_18290 methyl-accepting chemotaxis protein K02660 pilJ; twitching motility protein PilJ
D AB3G31_18285 Hpt domain-containing protein K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D AB3G31_02885 sigma-54 dependent transcriptional regulator K02667 pilR; two-component system, NtrC family, response regulator PilR
D AB3G31_02890 HAMP domain-containing sensor histidine kinase K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D AB3G31_20840 type IV pilus twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D AB3G31_07305 PilT/PilU family type 4a pilus ATPase K02670 pilU; twitching motility protein PilU
D AB3G31_13120 PilT/PilU family type 4a pilus ATPase K02670 pilU; twitching motility protein PilU
D AB3G31_20850 PilT/PilU family type 4a pilus ATPase K02670 pilU; twitching motility protein PilU
D AB3G31_01930 pilin K02650 pilA; type IV pilus assembly protein PilA
D AB3G31_04350 pilB; (GenBank) type IV-A pilus assembly ATPase PilB K02652 pilB; type IV pilus assembly protein PilB
D AB3G31_04345 type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC
D AB3G31_04340 A24 family peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D AB3G31_09235 pilW; (GenBank) type IV pilus biogenesis/stability protein PilW K02656 pilF; type IV pilus assembly protein PilF
D AB3G31_03375 type IV pilus secretin PilQ K02666 pilQ; type IV pilus assembly protein PilQ
D AB3G31_03370 pilus assembly protein PilP K02665 pilP; type IV pilus assembly protein PilP
D AB3G31_03365 type 4a pilus biogenesis protein PilO K02664 pilO; type IV pilus assembly protein PilO
D AB3G31_03360 PilN domain-containing protein K02663 pilN; type IV pilus assembly protein PilN
D AB3G31_03355 pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
D AB3G31_11980 PilZ domain-containing protein K02676 pilZ; type IV pilus assembly protein PilZ
D AB3G31_16450 pilV; (GenBank) type IV pilus modification protein PilV K02671 pilV; type IV pilus assembly protein PilV
D AB3G31_16455 PilW family protein K02672 pilW; type IV pilus assembly protein PilW
D AB3G31_16460 PilX N-terminal domain-containing pilus assembly protein K02673 pilX; type IV pilus assembly protein PilX
D AB3G31_16465 PilC/PilY family type IV pilus protein K02674 pilY1; type IV pilus assembly protein PilY1
D AB3G31_16470 type IV pilin protein K02655 pilE; type IV pilus assembly protein PilE
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:rhof04812]
D AB3G31_00995 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D AB3G31_19545 ftsZ; (GenBank) cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D AB3G31_19550 ftsA; (GenBank) cell division protein FtsA K03590 ftsA; cell division protein FtsA
D AB3G31_17800 minC; (GenBank) septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D AB3G31_17805 minD; (GenBank) septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D AB3G31_17810 minE; (GenBank) cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D AB3G31_00600 AAA family ATPase K03496 parA; chromosome partitioning protein
D AB3G31_06540 ParA family protein K03496 parA; chromosome partitioning protein
D AB3G31_18045 ParA family protein K03496 parA; chromosome partitioning protein
D AB3G31_00610 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:rhof04147]
D AB3G31_21150 htpG; (GenBank) molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D AB3G31_13880 eno; (GenBank) phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D AB3G31_00260 gap; (GenBank) type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D AB3G31_01520 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D AB3G31_01545 pyk; (GenBank) pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D AB3G31_09830 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D AB3G31_12275 membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D AB3G31_18180 dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D AB3G31_17430 groL; (GenBank) chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D AB3G31_14410 dnaK; (GenBank) molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D AB3G31_17455 pgi; (GenBank) glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D AB3G31_05380 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
D AB3G31_11900 guaB; (GenBank) IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D AB3G31_01190 tuf; (GenBank) elongation factor Tu K02358 tuf; elongation factor Tu
D AB3G31_02745 tuf; (GenBank) elongation factor Tu K02358 tuf; elongation factor Tu
D AB3G31_04230 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D AB3G31_03680 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D AB3G31_16960 bile acid:sodium symporter family protein K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D AB3G31_06655 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D AB3G31_19180 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D AB3G31_20345 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D AB3G31_05740 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AB3G31_13825 bktB; (GenBank) beta-ketothiolase BktB K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AB3G31_17595 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AB3G31_19020 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AB3G31_18985 ahcY; (GenBank) adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D AB3G31_14675 adk; (GenBank) adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D AB3G31_22135 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D AB3G31_03560 argH; (GenBank) argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D AB3G31_02105 argG; (GenBank) argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D AB3G31_13165 hydA; (GenBank) dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D AB3G31_20410 hydA; (GenBank) dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D AB3G31_16610 fahA; (GenBank) fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
D AB3G31_03955 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D AB3G31_05455 galK; (GenBank) galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D AB3G31_11630 glgB; (GenBank) 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D AB3G31_20025 glpK; (GenBank) glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30]
D AB3G31_00410 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D AB3G31_13400 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D AB3G31_01145 hemB; (GenBank) porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D AB3G31_09095 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D AB3G31_16600 hppD; (GenBank) 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D AB3G31_07530 4a-hydroxytetrahydrobiopterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D AB3G31_14695 D-2-hydroxyacid dehydrogenase family protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D AB3G31_16700 serA; (GenBank) phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D AB3G31_18350 purH; (GenBank) bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D AB3G31_07535 M48 family metallopeptidase K06013 STE24; STE24 endopeptidase [EC:3.4.24.84]
D AB3G31_08195 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AB3G31_14465 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AB3G31_13000 electron transfer flavoprotein subunit alpha/FixB family protein K03522 fixB; electron transfer flavoprotein alpha subunit
D AB3G31_16815 FAD-binding protein K03522 fixB; electron transfer flavoprotein alpha subunit
D AB3G31_08655 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D AB3G31_17480 zwf; (GenBank) glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D AB3G31_08555 tpiA; (GenBank) triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D AB3G31_07730 gpmA; (GenBank) 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D AB3G31_01095 lipocalin family protein K03098 APOD; apolipoprotein D and lipocalin family protein
C 02048 Prokaryotic defense system [BR:rhof02048]
D AB3G31_00125 cas1f; (GenBank) type I-F CRISPR-associated endonuclease Cas1f K15342 cas1; CRISP-associated protein Cas1
D AB3G31_00130 cas3f; (GenBank) type I-F CRISPR-associated helicase Cas3f K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D AB3G31_00135 csy1; (GenBank) type I-F CRISPR-associated protein Csy1 K19127 csy1; CRISPR-associated protein Csy1
D AB3G31_00140 csy2; (GenBank) type I-F CRISPR-associated protein Csy2 K19128 csy2; CRISPR-associated protein Csy2
D AB3G31_00145 csy3; (GenBank) type I-F CRISPR-associated protein Csy3 K19129 csy3; CRISPR-associated protein Csy3
D AB3G31_00150 cas6f; (GenBank) type I-F CRISPR-associated endoribonuclease Cas6/Csy4 K19130 csy4; CRISPR-associated endonuclease Csy4 [EC:3.1.-.-]
D AB3G31_03905 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D AB3G31_15720 HNH endonuclease signature motif containing protein K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]
D AB3G31_05950 restriction endonuclease K07448 mrr; restriction system protein
D AB3G31_13855 type II toxin-antitoxin system PemK/MazF family toxin K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D AB3G31_03580 type II toxin-antitoxin system HipA family toxin K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D AB3G31_03575 helix-turn-helix domain-containing protein K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB
D AB3G31_06735 type II toxin-antitoxin system CcdA family antitoxin K19164 ccdA; antitoxin CcdA
D AB3G31_20455 type II toxin-antitoxin system RelE/ParE family toxin K19092 parE1_3_4; toxin ParE1/3/4
D AB3G31_20450 type II toxin-antitoxin system ParD family antitoxin K07746 parD1_3_4; antitoxin ParD1/3/4
D AB3G31_07580 transcriptional regulator K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D AB3G31_15545 type II toxin-antitoxin system VapC family toxin K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D AB3G31_15550 AbrB/MazE/SpoVT family DNA-binding domain-containing protein K18829 mvpT; antitoxin VapB
D AB3G31_19545 ftsZ; (GenBank) cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D AB3G31_00995 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D AB3G31_14355 parC; (GenBank) DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D AB3G31_14365 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D AB3G31_04065 gltX; (GenBank) glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D AB3G31_04660 succinate dehydrogenase assembly factor 2 K09159 cptB; antitoxin CptB
D AB3G31_11100 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D AB3G31_17650 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:rhof01504]
D AB3G31_12305 ddpX; (GenBank) D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D AB3G31_07350 MBOAT family O-acyltransferase K03739 dltB; membrane protein involved in D-alanine export
D AB3G31_12250 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D AB3G31_16280 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D AB3G31_21615 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D AB3G31_12255 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D AB3G31_16275 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D AB3G31_21620 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D AB3G31_08275 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D AB3G31_08675 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D AB3G31_16270 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D AB3G31_21510 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D AB3G31_07255 efflux RND transporter periplasmic adaptor subunit K18302 mexJ; membrane fusion protein, multidrug efflux system
D AB3G31_07260 efflux RND transporter permease subunit K18303 mexK; multidrug efflux pump
D AB3G31_12270 TolC family outer membrane protein K12340 tolC; outer membrane protein
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:rhof00537]
D AB3G31_12275 membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D AB3G31_18180 dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:rhof03100]
D AB3G31_02615 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D AB3G31_02640 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D AB3G31_04070 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D AB3G31_04185 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D AB3G31_04190 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D AB3G31_14715 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D AB3G31_18095 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D AB3G31_20885 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D AB3G31_12540 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D AB3G31_12545 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D AB3G31_04080 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D AB3G31_09010 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D AB3G31_02985 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D AB3G31_04075 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D AB3G31_02755 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D AB3G31_09005 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D AB3G31_09015 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D AB3G31_09405 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D AB3G31_15430 tRNA-His K14226 tRNA-His; tRNA His
D AB3G31_02610 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D AB3G31_02635 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D AB3G31_05110 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AB3G31_05115 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AB3G31_07265 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AB3G31_08565 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AB3G31_09020 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AB3G31_16150 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AB3G31_08325 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D AB3G31_13280 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D AB3G31_03040 tRNA-Ile K14230 tRNA-Met; tRNA Met
D AB3G31_03125 tRNA-Ile K14230 tRNA-Met; tRNA Met
D AB3G31_18420 tRNA-Met K14230 tRNA-Met; tRNA Met
D AB3G31_19890 tRNA-Met K14230 tRNA-Met; tRNA Met
D AB3G31_02670 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D AB3G31_08730 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D AB3G31_12430 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D AB3G31_16585 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D AB3G31_06525 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D AB3G31_06855 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D AB3G31_07565 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D AB3G31_10400 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D AB3G31_02750 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D AB3G31_03950 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D AB3G31_04295 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D AB3G31_02740 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D AB3G31_02760 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D AB3G31_05095 tRNA-Val K14237 tRNA-Val; tRNA Val
D AB3G31_11135 tRNA-Val K14237 tRNA-Val; tRNA Val
D AB3G31_15440 tRNA-Val K14237 tRNA-Val; tRNA Val
D AB3G31_02605 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AB3G31_02630 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AB3G31_02620 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AB3G31_02645 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AB3G31_02625 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AB3G31_02650 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AB3G31_19680 rnpB; (GenBank) RNase P RNA component class A K01978 rnpB; RNase P catalytic RNA component
D AB3G31_05585 ssrA; (GenBank) transfer-messenger RNA K15035 ssrA; transfer-messenger RNA
D AB3G31_10020 ffs; (GenBank) signal recognition particle sRNA small type K01983 ffs; signal recognition particle 4.5S RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D AB3G31_02115 SDR family oxidoreductase K00046 idnO; gluconate 5-dehydrogenase [EC:1.1.1.69]
D AB3G31_16725 L-carnitine dehydrogenase K17735 lcdH; carnitine 3-dehydrogenase [EC:1.1.1.108]
D AB3G31_15000 Gfo/Idh/MocA family oxidoreductase K19181 afr; 1,5-anhydro-D-fructose reductase (1,5-anhydro-D-mannitol-forming) [EC:1.1.1.292]
D AB3G31_19455 Gfo/Idh/MocA family oxidoreductase K19181 afr; 1,5-anhydro-D-fructose reductase (1,5-anhydro-D-mannitol-forming) [EC:1.1.1.292]
D AB3G31_11245 SDR family NAD(P)-dependent oxidoreductase K16216 yueD; benzil reductase ((S)-benzoin forming) [EC:1.1.1.320]
D AB3G31_10515 aldo/keto reductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D AB3G31_10745 pdxA; (GenBank) 4-hydroxythreonine-4-phosphate dehydrogenase PdxA K22024 pdxA2; 4-phospho-D-threonate 3-dehydrogenase / 4-phospho-D-erythronate 3-dehydrogenase [EC:1.1.1.408 1.1.1.409]
D AB3G31_00860 mgrA; (GenBank) L-glyceraldehyde 3-phosphate reductase K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-]
D AB3G31_01635 alcohol dehydrogenase catalytic domain-containing protein K23271 eltD; erythritol/L-threitol dehydrogenase [EC:1.1.1.-]
D AB3G31_09395 PQQ-dependent sugar dehydrogenase K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-]
D AB3G31_20230 coniferyl aldehyde dehydrogenase K00154 E1.2.1.68; coniferyl-aldehyde dehydrogenase [EC:1.2.1.68]
D AB3G31_01460 indolepyruvate ferredoxin oxidoreductase family protein K04090 E1.2.7.8; indolepyruvate ferredoxin oxidoreductase [EC:1.2.7.8]
D AB3G31_04785 pqqC; (GenBank) pyrroloquinoline-quinone synthase PqqC K06137 pqqC; pyrroloquinoline-quinone synthase [EC:1.3.3.11]
D AB3G31_11185 NAD(P)-binding domain-containing protein K06988 fno; 8-hydroxy-5-deazaflavin:NADPH oxidoreductase [EC:1.5.1.40]
D AB3G31_20380 NAD(P)-binding domain-containing protein K06988 fno; 8-hydroxy-5-deazaflavin:NADPH oxidoreductase [EC:1.5.1.40]
D AB3G31_20510 NAD(P)-binding domain-containing protein K06988 fno; 8-hydroxy-5-deazaflavin:NADPH oxidoreductase [EC:1.5.1.40]
D AB3G31_10160 electron transfer flavoprotein-ubiquinone oxidoreductase K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1]
D AB3G31_16805 electron transfer flavoprotein-ubiquinone oxidoreductase K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1]
D AB3G31_09525 FAD-dependent oxidoreductase K18208 RNLS; renalase [EC:1.6.3.5]
D AB3G31_16970 quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D AB3G31_10620 NAD(P)H-dependent oxidoreductase K03923 mdaB; NADPH dehydrogenase (quinone) [EC:1.6.5.10]
D AB3G31_08045 FMN-dependent NADH-azoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D AB3G31_11180 FMN-dependent NADH-azoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D AB3G31_15315 ahpF; (GenBank) alkyl hydroperoxide reductase subunit F K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-]
D AB3G31_01720 msrA; (GenBank) peptide-methionine (S)-S-oxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D AB3G31_10775 msrA; (GenBank) peptide-methionine (S)-S-oxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D AB3G31_12235 msrA; (GenBank) peptide-methionine (S)-S-oxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D AB3G31_12125 msrB; (GenBank) peptide-methionine (R)-S-oxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D AB3G31_01725 glutathione S-transferase N-terminal domain-containing protein K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D AB3G31_07850 yghU; (GenBank) glutathione-dependent disulfide-bond oxidoreductase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D AB3G31_03320 msrP; (GenBank) protein-methionine-sulfoxide reductase catalytic subunit MsrP K07147 msrP; methionine sulfoxide reductase catalytic subunit [EC:1.8.-.-]
D AB3G31_13810 cytochrome b K12262 cybB; superoxide oxidase [EC:1.10.3.17]
D AB3G31_02100 alpha/beta hydrolase K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10]
D AB3G31_04725 peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D AB3G31_15310 ahpC; (GenBank) alkyl hydroperoxide reductase subunit C K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26]
D AB3G31_07870 OsmC family peroxiredoxin K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D AB3G31_21420 organic hydroperoxide resistance protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D AB3G31_01400 Dyp-type peroxidase K07223 yfeX; porphyrinogen peroxidase [EC:1.11.1.-]
D AB3G31_09535 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D AB3G31_11190 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D AB3G31_17580 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D AB3G31_20575 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D AB3G31_21215 TauD/TfdA family dioxygenase K24291 tmpA; [2-(trimethylamino)ethyl]phosphonate dioxygenase [EC:1.14.11.72]
D AB3G31_04145 Fe2+-dependent dioxygenase K07336 K07336; PKHD-type hydroxylase [EC:1.14.11.-]
D AB3G31_03605 hmpA; (GenBank) NO-inducible flavohemoprotein K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17]
D AB3G31_08855 LLM class flavin-dependent oxidoreductase K28525 cmoJ; N-acetyl-S-alkylcysteine sulfoxide monooxygenase [EC:1.14.14.-]
D AB3G31_11940 copper oxidase K22348 moxA; manganese oxidase [EC:1.16.3.3]
D AB3G31_07240 hpnE; (GenBank) hydroxysqualene dehydroxylase HpnE K21677 hpnE; hydroxysqualene dehydroxylase [EC:1.17.8.1]
D AB3G31_05640 ferredoxin--NADP reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D AB3G31_05005 arsC; (GenBank) arsenate reductase (glutaredoxin) K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D AB3G31_04775 pqqE; (GenBank) pyrroloquinoline quinone biosynthesis protein PqqE K06139 pqqE; PqqA peptide cyclase [EC:1.21.98.4]
D AB3G31_12260 protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D AB3G31_15415 protein-L-isoaspartate(D-aspartate) O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D AB3G31_00190 cyclopropane-fatty-acyl-phospholipid synthase family protein K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D AB3G31_11145 cyclopropane-fatty-acyl-phospholipid synthase family protein K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D AB3G31_19115 lnt; (GenBank) apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D AB3G31_16735 3-keto-5-aminohexanoate cleavage protein K27837 cdhC; 3-dehydrocarnitine:acetyl-CoA trimethylamine transferase [EC:2.3.1.317]
D AB3G31_11515 GNAT family N-acetyltransferase K03829 yedL; putative acetyltransferase [EC:2.3.1.-]
D AB3G31_11790 aat; (GenBank) leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D AB3G31_13030 DUF3488 and transglutaminase-like domain-containing protein K22452 tgpA; protein-glutamine gamma-glutamyltransferase [EC:2.3.2.13]
D AB3G31_11795 arginyltransferase K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29]
D AB3G31_16995 glycosyltransferase family 4 protein K00754 bshA; L-malate glycosyltransferase [EC:2.4.1.-]
D AB3G31_21325 mdcB; (GenBank) triphosphoribosyl-dephospho-CoA synthase MdcB K13930 mdcB; triphosphoribosyl-dephospho-CoA synthase [EC:2.4.2.52]
D AB3G31_01700 tRNA-uridine aminocarboxypropyltransferase K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25]
D AB3G31_02930 tRNA-uridine aminocarboxypropyltransferase K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25]
D AB3G31_14255 lgt; (GenBank) prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D AB3G31_04840 FAD:protein FMN transferase K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D AB3G31_08330 PfkB family carbohydrate kinase K18478 yihV; sulfofructose kinase [EC:2.7.1.184]
D AB3G31_10750 four-carbon acid sugar kinase family protein K22129 dtnK; D-threonate/D-erythronate kinase [EC:2.7.1.219 2.7.1.220]
D AB3G31_06285 pyruvate, water dikinase regulatory protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D AB3G31_21605 glnE; (GenBank) bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D AB3G31_03110 retron St85 family RNA-directed DNA polymerase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D AB3G31_21330 mdcG; (GenBank) malonate decarboxylase holo-[acyl-carrier-protein] synthase K13934 mdcG; phosphoribosyl-dephospho-CoA transferase [EC:2.7.7.66]
D AB3G31_12120 protein adenylyltransferase SelO K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108]
D AB3G31_19045 aceK; (GenBank) bifunctional isocitrate dehydrogenase kinase/phosphatase K00906 aceK; isocitrate dehydrogenase kinase/phosphatase [EC:2.7.11.5 3.1.3.-]
D AB3G31_20310 hprK; (GenBank) HPr(Ser) kinase/phosphatase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-]
D AB3G31_16720 thioesterase family protein K27492 cdhB; betainyl-CoA thioesterase [EC:3.1.2.33]
D AB3G31_16505 ybgC; (GenBank) tol-pal system-associated acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D AB3G31_03840 3',5'-nucleoside bisphosphate phosphatase K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D AB3G31_11835 sixA; (GenBank) phosphohistidine phosphatase SixA K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D AB3G31_06695 two-component system response regulator K07814 K07814; cyclic di-GMP phosphodiesterase [EC:3.1.4.-]
D AB3G31_07050 two-component system response regulator K07814 K07814; cyclic di-GMP phosphodiesterase [EC:3.1.4.-]
D AB3G31_13745 two-component system response regulator K07814 K07814; cyclic di-GMP phosphodiesterase [EC:3.1.4.-]
D AB3G31_20495 HD domain-containing phosphohydrolase K07814 K07814; cyclic di-GMP phosphodiesterase [EC:3.1.4.-]
D AB3G31_01375 HD-GYP domain-containing protein K25135 K25135; cyclic di-GMP phosphodiesterase [EC:3.1.4.-]
D AB3G31_01385 HD-GYP domain-containing protein K25135 K25135; cyclic di-GMP phosphodiesterase [EC:3.1.4.-]
D AB3G31_04110 betC; (GenBank) choline-sulfatase K01133 betC; choline-sulfatase [EC:3.1.6.6]
D AB3G31_03780 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D AB3G31_11975 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D AB3G31_01500 def; (GenBank) peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D AB3G31_12320 def; (GenBank) peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D AB3G31_08140 penicillin acylase family protein K07116 pvdQ; acyl-homoserine-lactone acylase [EC:3.5.1.97]
D AB3G31_21595 carbon-nitrogen hydrolase family protein K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128]
D AB3G31_06680 8-oxoguanine deaminase K18456 E3.5.4.32; 8-oxoguanine deaminase [EC:3.5.4.32]
D AB3G31_04415 Maf family nucleotide pyrophosphatase K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-]
D AB3G31_13020 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D AB3G31_00605 alpha/beta hydrolase K07002 RBBP9; serine hydrolase [EC:3.-.-.-]
D AB3G31_14485 alpha/beta hydrolase K07002 RBBP9; serine hydrolase [EC:3.-.-.-]
D AB3G31_00730 amidohydrolase family protein K22213 PATG; 6-methylsalicylate decarboxylase [EC:4.1.1.52]
D AB3G31_21340 biotin-independent malonate decarboxylase subunit beta K13932 mdcD; malonate decarboxylase beta subunit [EC:4.1.1.87]
D AB3G31_21335 biotin-independent malonate decarboxylase subunit gamma K13933 mdcE; malonate decarboxylase gamma subunit [EC:4.1.1.87]
D AB3G31_01975 altronate dehydratase family protein K26399 K26399; arabinonate dehydratase [EC:4.2.1.5]
D AB3G31_05130 NAD(P)H-hydrate dehydratase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D AB3G31_01575 RbsD/FucU domain-containing protein K02431 fucU; L-fucose mutarotase [EC:5.1.3.29]
D AB3G31_08070 RbsD/FucU domain-containing protein K02431 fucU; L-fucose mutarotase [EC:5.1.3.29]
D AB3G31_07795 rhaM; (GenBank) L-rhamnose mutarotase K03534 rhaM; L-rhamnose mutarotase [EC:5.1.3.32]
D AB3G31_19145 otnI; (GenBank) 2-oxo-tetronate isomerase K22131 otnI; 2-dehydrotetronate isomerase [EC:5.3.1.35]
D AB3G31_05725 feruloyl-CoA synthase K12508 fcs; feruloyl-CoA synthase [EC:6.2.1.34]
D AB3G31_17785 cphA; (GenBank) cyanophycin synthetase K03802 cphA; cyanophycin synthetase [EC:6.3.2.29 6.3.2.30]
D AB3G31_17790 cphA; (GenBank) cyanophycin synthetase K03802 cphA; cyanophycin synthetase [EC:6.3.2.29 6.3.2.30]
D AB3G31_02825 mpl; (GenBank) UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45]
D AB3G31_10430 DNA ligase K26441 lig; DNA ligase [EC:6.5.1.1]
D AB3G31_13735 RnfABCDGE type electron transport complex subunit B K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D AB3G31_02235 cation-translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D AB3G31_06455 cation-translocating P-type ATPase K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D AB3G31_20045 heavy metal translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
C 99981 Carbohydrate metabolism
D AB3G31_00695 sugar phosphate isomerase/epimerase K06605 iolH; myo-inositol catabolism protein IolH
D AB3G31_00370 glycoside hydrolase family 3 N-terminal domain-containing protein K17641 bxlA; beta-xylosidase
C 99982 Energy metabolism
D AB3G31_05365 fdhD; (GenBank) formate dehydrogenase accessory sulfurtransferase FdhD K02379 fdhD; FdhD protein
D AB3G31_09860 fdxA; (GenBank) ferredoxin FdxA K05524 fdxA; ferredoxin
D AB3G31_11105 iscU; (GenBank) Fe-S cluster assembly scaffold IscU K04488 iscU; nitrogen fixation protein NifU and related proteins
D AB3G31_13450 tcuB; (GenBank) tricarballylate utilization 4Fe-4S protein TcuB K13795 citB; citrate/tricarballylate utilization protein
D AB3G31_13445 tcuA; (GenBank) FAD-dependent tricarballylate dehydrogenase TcuA K13796 cobZ; tricarballylate dehydrogenase
D AB3G31_13005 electron transfer flavoprotein subunit beta/FixA family protein K03521 fixA; electron transfer flavoprotein beta subunit
D AB3G31_16820 electron transfer flavoprotein subunit beta/FixA family protein K03521 fixA; electron transfer flavoprotein beta subunit
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D AB3G31_03585 VOC family protein K08234 yaeR; glyoxylase I family protein
D AB3G31_20835 YggS family pyridoxal phosphate-dependent enzyme K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D AB3G31_05530 LapA family protein K08992 lapA; lipopolysaccharide assembly protein A
D AB3G31_05525 lapB; (GenBank) lipopolysaccharide assembly protein LapB K19804 lapB; lipopolysaccharide assembly protein B
C 99987 Cofactor metabolism
D AB3G31_04365 heme biosynthesis HemY N-terminal domain-containing protein K02498 hemY; HemY protein
D AB3G31_16670 ubiB; (GenBank) ubiquinone biosynthesis regulatory protein kinase UbiB K03688 ubiB; ubiquinone biosynthesis protein
D AB3G31_16675 hypothetical protein K03690 ubiJ; ubiquinone biosynthesis accessory factor UbiJ
D AB3G31_04755 mobB; (GenBank) molybdopterin-guanine dinucleotide biosynthesis protein B K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein
C 99988 Secondary metabolism
D AB3G31_00540 NAD(P)H-dependent oxidoreductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone)
D AB3G31_15020 NAD(P)H-dependent oxidoreductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone)
C 99999 Others
D AB3G31_03690 DoxX family protein K15977 K15977; putative oxidoreductase
D AB3G31_09540 DoxX family protein K15977 K15977; putative oxidoreductase
D AB3G31_20725 DoxX family protein K15977 K15977; putative oxidoreductase
D AB3G31_06350 phospholipase K06999 K06999; phospholipase/carboxylesterase
D AB3G31_08950 ypfH; (GenBank) esterase K06999 K06999; phospholipase/carboxylesterase
D AB3G31_18580 dienelactone hydrolase family protein K06999 K06999; phospholipase/carboxylesterase
D AB3G31_11165 bifunctional acetate--CoA ligase family protein/GNAT family N-acetyltransferase K09181 yfiQ; acetyltransferase
D AB3G31_15180 bifunctional acetate--CoA ligase family protein/GNAT family N-acetyltransferase K09181 yfiQ; acetyltransferase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D AB3G31_21810 glnK; (GenBank) P-II family nitrogen regulator K04752 glnK; nitrogen regulatory protein P-II 2
D AB3G31_12035 Tex family protein K06959 tex; protein Tex
C 99974 Translation
D AB3G31_04875 MBL fold metallo-hydrolase K07576 K07576; metallo-beta-lactamase family protein
C 99975 Protein processing
D AB3G31_11820 clpS; (GenBank) ATP-dependent Clp protease adapter ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D AB3G31_07270 tig; (GenBank) trigger factor K03545 tig; trigger factor
D AB3G31_03325 protein-methionine-sulfoxide reductase heme-binding subunit MsrQ K17247 msrQ; methionine sulfoxide reductase heme-binding subunit
D AB3G31_06880 ureE; (GenBank) urease accessory protein UreE K03187 ureE; urease accessory protein
D AB3G31_06875 urease accessory UreF family protein K03188 ureF; urease accessory protein
D AB3G31_06870 ureG; (GenBank) urease accessory protein UreG K03189 ureG; urease accessory protein
D AB3G31_15140 urease accessory protein UreD K03190 ureD; urease accessory protein
D AB3G31_06470 HupE/UreJ family protein K03192 ureJ; urease accessory protein
D AB3G31_06475 HupE/UreJ family protein K03192 ureJ; urease accessory protein
D AB3G31_11920 smpB; (GenBank) SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein
D AB3G31_21815 YifB family Mg chelatase-like AAA ATPase K07391 comM; magnesium chelatase family protein
D AB3G31_15840 proteasome-type protease K07395 K07395; putative proteasome-type protease
D AB3G31_05655 DsbA family protein K07396 K07396; putative protein-disulfide isomerase
D AB3G31_17680 OsmC family protein K07397 yhfA; putative redox protein
D AB3G31_17945 OsmC family protein K07397 yhfA; putative redox protein
D AB3G31_03310 cytochrome c biogenesis protein ResB K07399 resB; cytochrome c biogenesis protein
D AB3G31_07660 xdhC; (GenBank) xanthine dehydrogenase accessory protein XdhC K07402 xdhC; xanthine dehydrogenase accessory factor
C 99976 Replication and repair
D AB3G31_05435 radC; (GenBank) DNA repair protein RadC K03630 radC; DNA repair protein RadC
D AB3G31_13260 radC; (GenBank) DNA repair protein RadC K03630 radC; DNA repair protein RadC
D AB3G31_08105 rmuC; (GenBank) DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC
D AB3G31_20870 YraN family protein K07460 yraN; putative endonuclease
D AB3G31_01490 dprA; (GenBank) DNA-processing protein DprA K04096 smf; DNA processing protein
D AB3G31_15370 replication-associated recombination protein A K07478 ycaJ; putative ATPase
D AB3G31_14585 toprim domain-containing protein K06919 K06919; putative DNA primase/helicase
D AB3G31_03435 transposase K07491 rayT; REP-associated tyrosine transposase
C 99979 Viral proteins
C 99998 Others
D AB3G31_10050 YbaB/EbfC family nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D AB3G31_07475 inorganic phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family
D AB3G31_12510 cytosine permease K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family
D AB3G31_06435 TrkA C-terminal domain-containing protein K07085 K07085; putative transport protein
C 99978 Cell growth
D AB3G31_12130 septation protein A K06190 ispZ; intracellular septation protein
D AB3G31_12960 SpoVR family protein K06415 spoVR; stage V sporulation protein R
C 99993 Cell motility
C 99995 Signaling proteins
D AB3G31_11570 typA; (GenBank) translational GTPase TypA K06207 typA; GTP-binding protein
D AB3G31_02065 HPP family protein K07168 K07168; CBS domain-containing membrane protein
D AB3G31_18830 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D AB3G31_04720 PhoH family protein K07175 phoH2; PhoH-like ATPase
D AB3G31_12950 PrkA family serine protein kinase K07180 prkA; serine protein kinase
D AB3G31_16300 ATPase domain-containing protein K08482 kaiC; circadian clock protein KaiC
D AB3G31_04015 YajQ family cyclic di-GMP-binding protein K09767 yajQ; cyclic-di-GMP-binding protein
C 99992 Structural proteins
D AB3G31_15380 lolA; (GenBank) outer membrane lipoprotein chaperone LolA K03634 lolA; outer membrane lipoprotein carrier protein
D AB3G31_02995 outer membrane lipoprotein LolB K02494 lolB; outer membrane lipoprotein LolB
D AB3G31_03465 VacJ family lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA
D AB3G31_05190 OmpH family outer membrane protein K06142 hlpA; outer membrane protein
D AB3G31_15410 peptidoglycan DD-metalloendopeptidase family protein K06194 nlpD; lipoprotein NlpD
D AB3G31_01535 OmpW family outer membrane protein K07275 ompW; outer membrane protein
D AB3G31_01755 OmpW family outer membrane protein K07275 ompW; outer membrane protein
D AB3G31_06185 AsmA family protein K07289 asmA; AsmA protein
D AB3G31_19650 HlyD family efflux transporter periplasmic adaptor subunit K01993 ABC-2.TX; HlyD family secretion protein
D AB3G31_15875 efflux RND transporter periplasmic adaptor subunit K02005 ABC.CD.TX; HlyD family secretion protein
D AB3G31_12380 glycine zipper 2TM domain-containing protein K04062 osmB; osmotically inducible lipoprotein OsmB
D AB3G31_07070 creD; (GenBank) cell envelope integrity protein CreD K06143 creD; inner membrane protein
D AB3G31_09240 helix-turn-helix domain-containing protein K15539 rodZ; cytoskeleton protein RodZ
C 99994 Others
D AB3G31_09925 phoU; (GenBank) phosphate signaling complex protein PhoU K02039 phoU; phosphate transport system protein
D AB3G31_04135 (2Fe-2S)-binding protein K02192 bfd; bacterioferritin-associated ferredoxin
D AB3G31_10255 glucan biosynthesis protein G K03670 mdoG; periplasmic glucans biosynthesis protein
D AB3G31_02955 apaG; (GenBank) Co2+/Mg2+ efflux protein ApaG K06195 apaG; ApaG protein
D AB3G31_03345 cyaY; (GenBank) iron donor protein CyaY K06202 cyaY; iron-sulfur cluster assembly protein CyaY
D AB3G31_14805 hemerythrin domain-containing protein K07216 hr; hemerythrin
D AB3G31_11460 MSMEG_0569 family flavin-dependent oxidoreductase K07222 K07222; putative flavoprotein involved in K+ transport
D AB3G31_19105 NAD(P)/FAD-dependent oxidoreductase K07222 K07222; putative flavoprotein involved in K+ transport
D AB3G31_04170 imelysin family protein K07231 K07231; putative iron-regulated protein
B
B 09194 Poorly characterized
C 99996 General function prediction only
D AB3G31_04055 CvpA family protein K03558 cvpA; membrane protein required for colicin V production
D AB3G31_20605 GNAT family N-acetyltransferase K02348 elaA; ElaA protein
D AB3G31_06720 BON domain-containing protein K04065 osmY; hyperosmotically inducible periplasmic protein
D AB3G31_04795 pqqA; (GenBank) pyrroloquinoline quinone precursor peptide PqqA K06135 pqqA; pyrroloquinoline quinone biosynthesis protein A
D AB3G31_04790 pqqB; (GenBank) pyrroloquinoline quinone biosynthesis protein PqqB K06136 pqqB; pyrroloquinoline quinone biosynthesis protein B
D AB3G31_04780 pqqD; (GenBank) pyrroloquinoline quinone biosynthesis peptide chaperone PqqD K06138 pqqD; pyrroloquinoline quinone biosynthesis protein D
D AB3G31_05405 group II truncated hemoglobin K06886 glbN; hemoglobin
D AB3G31_06645 group 1 truncated hemoglobin K06886 glbN; hemoglobin
D AB3G31_01065 patatin-like phospholipase family protein K07001 K07001; NTE family protein
D AB3G31_03760 cyclic nucleotide-binding and patatin-like phospholipase domain-containing protein K07001 K07001; NTE family protein
D AB3G31_05310 patatin-like phospholipase family protein K07001 K07001; NTE family protein
D AB3G31_08030 patatin-like phospholipase family protein K07001 K07001; NTE family protein
D AB3G31_19035 patatin-like phospholipase family protein K07001 K07001; NTE family protein
D AB3G31_20765 patatin-like phospholipase family protein K07001 K07001; NTE family protein
D AB3G31_09970 HAD family phosphatase K07025 K07025; putative hydrolase of the HAD superfamily
D AB3G31_18895 erpA; (GenBank) iron-sulfur cluster insertion protein ErpA K15724 erpA; iron-sulfur cluster insertion protein
D AB3G31_06690 YihY/virulence factor BrkB family protein K07058 K07058; membrane protein
D AB3G31_06750 YihY family inner membrane protein K07058 K07058; membrane protein
D AB3G31_11670 sulfurtransferase K07146 K07146; UPF0176 protein
D AB3G31_12975 rhodanese-related sulfurtransferase K07146 K07146; UPF0176 protein
D AB3G31_04100 heme-binding protein K11477 glcG; glc operon protein GlcG
D AB3G31_05650 heme-binding protein K11477 glcG; glc operon protein GlcG
D AB3G31_05010 arsH; (GenBank) arsenical resistance protein ArsH K11811 arsH; arsenical resistance protein ArsH
D AB3G31_02695 LemA family protein K03744 lemA; LemA protein
D AB3G31_20910 LemA family protein K03744 lemA; LemA protein
D AB3G31_11330 SlyX family protein K03745 slyX; SlyX protein
D AB3G31_01485 DUF494 domain-containing protein K03747 smg; Smg protein
D AB3G31_17815 CreA family protein K05805 creA; CreA protein
D AB3G31_04050 SPOR domain-containing protein K03749 dedD; DedD protein
D AB3G31_10790 VTT domain-containing protein K03975 dedA; membrane-associated protein
D AB3G31_01900 phage holin family protein K08972 K08972; putative membrane protein
D AB3G31_10605 YchJ family protein K09858 K09858; SEC-C motif domain protein
D AB3G31_19175 zinc ribbon domain-containing protein YjdM K06193 phnA; protein PhnA
C 99997 Function unknown
D AB3G31_11970 ankyrin repeat domain-containing protein K06867 K06867; uncharacterized protein
D AB3G31_18870 ankyrin repeat domain-containing protein K06867 K06867; uncharacterized protein
D AB3G31_20915 TPM domain-containing protein K06872 K06872; uncharacterized protein
D AB3G31_11150 KGG domain-containing protein K06884 K06884; uncharacterized protein
D AB3G31_05610 hydrolase 1, exosortase A system-associated K06889 K06889; uncharacterized protein
D AB3G31_10475 alpha/beta hydrolase K06889 K06889; uncharacterized protein
D AB3G31_04315 ATP-binding protein K06923 K06923; uncharacterized protein
D AB3G31_02945 CoA-binding protein K06929 K06929; uncharacterized protein
D AB3G31_05750 PPC domain-containing DNA-binding protein K06934 K06934; uncharacterized protein
D AB3G31_01890 DUF3717 domain-containing protein K06938 K06938; uncharacterized protein
D AB3G31_19355 DUF1289 domain-containing protein K06938 K06938; uncharacterized protein
D AB3G31_00535 YkgJ family cysteine cluster protein K06940 K06940; uncharacterized protein
D AB3G31_17315 YkgJ family cysteine cluster protein K06940 K06940; uncharacterized protein
D AB3G31_02895 PP0621 family protein K06950 K06950; uncharacterized protein
D AB3G31_21230 CocE/NonD family hydrolase K06978 K06978; uncharacterized protein
D AB3G31_13975 succinylglutamate desuccinylase/aspartoacylase family protein K06987 K06987; uncharacterized protein
D AB3G31_10295 C39 family peptidase K06992 K06992; uncharacterized protein
D AB3G31_14510 VOC family protein K06996 K06996; uncharacterized protein
D AB3G31_19370 VOC family protein K06996 K06996; uncharacterized protein
D AB3G31_02795 YqiA/YcfP family alpha/beta fold hydrolase K07000 K07000; uncharacterized protein
D AB3G31_19435 MMPL family transporter K07003 K07003; uncharacterized protein
D AB3G31_01585 pyridoxamine 5'-phosphate oxidase family protein K07005 K07005; uncharacterized protein
D AB3G31_13560 pyridoxamine 5'-phosphate oxidase family protein K07006 K07006; uncharacterized protein
D AB3G31_01165 alpha/beta hydrolase K07018 K07018; uncharacterized protein
D AB3G31_20900 alpha/beta fold hydrolase K07019 K07019; uncharacterized protein
D AB3G31_20105 UPF0149 family protein K07039 K07039; uncharacterized protein
D AB3G31_08535 neutral zinc metallopeptidase K07054 K07054; uncharacterized protein
D AB3G31_14015 TIGR01777 family oxidoreductase K07071 K07071; uncharacterized protein
D AB3G31_05955 nucleotidyltransferase domain-containing protein K07075 K07075; uncharacterized protein
D AB3G31_12330 nucleotidyltransferase family protein K07075 K07075; uncharacterized protein
D AB3G31_01050 TSUP family transporter K07090 K07090; uncharacterized protein
D AB3G31_09890 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D AB3G31_11260 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D AB3G31_12060 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D AB3G31_01435 alkaline phosphatase PhoX K07093 K07093; uncharacterized protein
D AB3G31_09055 alkaline phosphatase PhoX K07093 K07093; uncharacterized protein
D AB3G31_09305 phosphoribosyltransferase K07101 K07101; uncharacterized protein
D AB3G31_19840 DUF6691 family protein K07112 K07112; uncharacterized protein
D AB3G31_19845 YeeE/YedE family protein K07112 K07112; uncharacterized protein
D AB3G31_00090 SET domain-containing protein-lysine N-methyltransferase K07117 K07117; uncharacterized protein
D AB3G31_06325 NAD(P)-dependent oxidoreductase K07118 K07118; uncharacterized protein
D AB3G31_11475 sll0787 family AIR synthase-like protein K07123 K07123; uncharacterized protein
D AB3G31_11040 SDR family oxidoreductase K07124 K07124; uncharacterized protein
D AB3G31_04920 tetratricopeptide repeat protein K07126 K07126; uncharacterized protein
D AB3G31_08305 tetratricopeptide repeat protein K07126 K07126; uncharacterized protein
D AB3G31_08490 tetratricopeptide repeat protein K07126 K07126; uncharacterized protein
D AB3G31_00040 ATP-binding protein K07133 K07133; uncharacterized protein
D AB3G31_19775 NAD(P)/FAD-dependent oxidoreductase K07137 K07137; uncharacterized protein
D AB3G31_18390 MOSC N-terminal beta barrel domain-containing protein K07140 K07140; MOSC domain-containing protein
D AB3G31_04585 LON peptidase substrate-binding domain-containing protein K07157 K07157; uncharacterized protein
D AB3G31_22160 yidD; (GenBank) membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein
D AB3G31_14635 DUF192 domain-containing protein K09005 K09005; uncharacterized protein
D AB3G31_07150 GatB/YqeY domain-containing protein K09117 K09117; uncharacterized protein
D AB3G31_02085 DUF167 family protein K09131 K09131; uncharacterized protein
D AB3G31_20980 DUF493 domain-containing protein K09158 K09158; uncharacterized protein
D AB3G31_00195 DUF1365 domain-containing protein K09701 K09701; uncharacterized protein
D AB3G31_00575 DUF808 domain-containing protein K09781 K09781; uncharacterized protein
D AB3G31_12955 YeaH/YhbH family protein K09786 K09786; uncharacterized protein
D AB3G31_14665 Trm112 family protein K09791 K09791; uncharacterized protein
D AB3G31_02180 sulfite exporter TauE/SafE family protein K09792 K09792; uncharacterized protein
D AB3G31_11210 DUF465 domain-containing protein K09794 K09794; uncharacterized protein
D AB3G31_11910 RnfH family protein K09801 K09801; uncharacterized protein
D AB3G31_16090 yaaA; (GenBank) peroxide stress protein YaaA K09861 K09861; uncharacterized protein
D AB3G31_04325 DNA gyrase inhibitor YacG K09862 K09862; uncharacterized protein
D AB3G31_04910 YceH family protein K09915 K09915; uncharacterized protein
D AB3G31_13100 GNAT family N-acetyltransferase K09919 K09919; uncharacterized protein
D AB3G31_19670 DUF484 family protein K09921 K09921; uncharacterized protein
D AB3G31_10275 crosslink repair DNA glycosylase YcaQ family protein K09927 K09927; uncharacterized protein
D AB3G31_00325 DUF2062 domain-containing protein K09928 K09928; uncharacterized protein
D AB3G31_20735 DUF692 domain-containing protein K09930 K09930; uncharacterized protein
D AB3G31_09290 DUF2065 domain-containing protein K09937 K09937; uncharacterized protein
D AB3G31_03405 DUF1415 domain-containing protein K09941 K09941; uncharacterized protein
D AB3G31_17820 DUF2076 family protein K09945 K09945; uncharacterized protein
D AB3G31_04155 DUF1513 domain-containing protein K09947 K09947; uncharacterized protein
D AB3G31_13640 DUF3820 family protein K09954 K09954; uncharacterized protein
D AB3G31_11505 nuclear transport factor 2 family protein K09958 K09958; uncharacterized protein
D AB3G31_04815 DUF779 domain-containing protein K09959 K09959; uncharacterized protein
D AB3G31_10325 DUF2239 family protein K09965 K09965; uncharacterized protein
D AB3G31_10405 DUF2237 domain-containing protein K09966 K09966; uncharacterized protein
D AB3G31_13470 urea amidolyase associated protein UAAP2 K09967 K09967; uncharacterized protein
D AB3G31_13475 urea amidolyase associated protein UAAP1 K09967 K09967; uncharacterized protein
D AB3G31_16810 HutD family protein K09975 K09975; uncharacterized protein
D AB3G31_19795 HutD family protein K09975 K09975; uncharacterized protein
D AB3G31_05510 DUF1993 domain-containing protein K09983 K09983; uncharacterized protein
D AB3G31_06005 DUF1993 domain-containing protein K09983 K09983; uncharacterized protein
D AB3G31_18080 VWA domain-containing protein K09989 K09989; uncharacterized protein
D AB3G31_00380 ThuA domain-containing protein K09992 K09992; uncharacterized protein
D AB3G31_07470 DUF47 domain-containing protein K07220 K07220; uncharacterized protein
D AB3G31_00920 imelysin family protein K07338 K07338; uncharacterized protein
D AB3G31_04160 imelysin family protein K07338 K07338; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: September 15, 2025