+D GENES KO
#
KEGG Orthology (KO) - Roseburia intestinalis XB6B4
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:rix00010]
D RO1_41480 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D RO1_41270 Transcriptional regulator/sugar kinase K25026 glk; glucokinase [EC:2.7.1.2]
D RO1_19460 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RO1_25700 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D RO1_04120 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D RO1_01220 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D RO1_05570 Uncharacterized protein conserved in bacteria K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D RO1_24870 fructose-1,6-bisphosphate aldolase, class II, various bacterial and amitochondriate protist K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RO1_27430 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RO1_27440 3-phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D RO1_16940 Fructose-2,6-bisphosphatase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D RO1_27480 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D RO1_36490 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RO1_27160 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RO1_02930 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RO1_07940 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D RO1_00510 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D RO1_00520 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D RO1_07500 pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D RO1_41870 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D RO1_12300 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D RO1_31390 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D RO1_27610 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D RO1_18010 alpha-phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RO1_37000 alpha-phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RO1_15280 phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
C 00020 Citrate cycle (TCA cycle) [PATH:rix00020]
D RO1_33800 Citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D RO1_15050 Isopropylmalate/homocitrate/citramalate synthases K05942 E2.3.3.3; citrate (Re)-synthase [EC:2.3.3.3]
D RO1_15320 Citrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D RO1_11370 Citrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D RO1_15030 isocitrate dehydrogenase, NADP-dependent, eukaryotic type K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D RO1_24620 hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D RO1_24630 hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D RO1_15280 phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D RO1_00510 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D RO1_00520 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D RO1_07500 pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
C 00030 Pentose phosphate pathway [PATH:rix00030]
D RO1_19460 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RO1_23160 3-carboxymuconate cyclase K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31]
D RO1_39460 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D RO1_01550 Transketolase, N-terminal subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RO1_01560 Transketolase, C-terminal subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RO1_27580 Transketolase, N-terminal subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RO1_27590 Transketolase, C-terminal subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RO1_27570 transaldolase, putative, TalC family K00616 TALDO1; transaldolase [EC:2.2.1.2]
D RO1_39560 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D RO1_37910 Phosphoketolase K01621 xfp; xylulose-5-phosphate/fructose-6-phosphate phosphoketolase [EC:4.1.2.9 4.1.2.22]
D RO1_12100 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D RO1_18010 alpha-phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RO1_37000 alpha-phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RO1_36680 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D RO1_17310 Entner-Doudoroff aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D RO1_21640 Sugar kinases, ribokinase family K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D RO1_21650 Sugar kinases, ribokinase family K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D RO1_24870 fructose-1,6-bisphosphate aldolase, class II, various bacterial and amitochondriate protist K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RO1_05570 Uncharacterized protein conserved in bacteria K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D RO1_25700 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D RO1_04120 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D RO1_01220 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C 00040 Pentose and glucuronate interconversions [PATH:rix00040]
D RO1_02500 Pectin methylesterase K01051 E3.1.1.11; pectinesterase [EC:3.1.1.11]
D RO1_08210 Cupin domain. K26933 kdgF; unsaturated pyranuronate lyase [EC:4.2.99.25]
D RO1_13480 4-deoxy-L-threo-5-hexulose uronate isomerase K01815 kduI; 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [EC:5.3.1.17]
D RO1_13490 D-glucuronate isomerase K01812 uxaC; glucuronate isomerase [EC:5.3.1.12]
D RO1_13510 tagaturonate reductase K00041 uxaB; tagaturonate reductase [EC:1.1.1.58]
D RO1_13520 D-altronate dehydratase K01685 uxaA; altronate hydrolase [EC:4.2.1.7]
D RO1_34380 Mannitol-1-phosphate/altronate dehydrogenases K00040 uxuB; fructuronate reductase [EC:1.1.1.57]
D RO1_22110 Beta-galactosidase/beta-glucuronidase K01195 uidA; beta-glucuronidase [EC:3.2.1.31]
D RO1_20990 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D RO1_13660 Sugar phosphate isomerases/epimerases K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22]
D RO1_27600 L-ribulose 5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D RO1_39460 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D RO1_27560 L-arabinose isomerase K01804 araA; L-arabinose isomerase [EC:5.3.1.4]
D RO1_27260 xylulokinase K00854 xylB; xylulokinase [EC:2.7.1.17]
D RO1_03550 rhamnulokinase K00848 rhaB; rhamnulokinase [EC:2.7.1.5]
D RO1_03570 L-rhamnulose 1-phosphate aldolase K01629 rhaD; rhamnulose-1-phosphate aldolase [EC:4.1.2.19]
D RO1_02490 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
C 00051 Fructose and mannose metabolism [PATH:rix00051]
D RO1_41120 Beta-mannanase K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78]
D RO1_31290 Sugar kinases, ribokinase family K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D RO1_20950 Mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D RO1_20930 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D RO1_02490 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
D RO1_03560 L-rhamnose isomerase K01813 rhaA; L-rhamnose isomerase [EC:5.3.1.14]
D RO1_03550 rhamnulokinase K00848 rhaB; rhamnulokinase [EC:2.7.1.5]
D RO1_03570 L-rhamnulose 1-phosphate aldolase K01629 rhaD; rhamnulose-1-phosphate aldolase [EC:4.1.2.19]
D RO1_25700 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D RO1_04120 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D RO1_01220 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D RO1_05570 Uncharacterized protein conserved in bacteria K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D RO1_31620 fructose-1-phosphate kinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D RO1_24870 fructose-1,6-bisphosphate aldolase, class II, various bacterial and amitochondriate protist K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RO1_31250 Beta-fructosidases (levanase/invertase) K03332 fruA; fructan beta-fructosidase [EC:3.2.1.80]
D RO1_39560 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D RO1_31630 PTS system D-fructose-specific IIA component (F1P-forming), Frc family (TC 4.A.2.1.4)/PTS system D-fructose-specific IIB component (F1P-forming), Frc family (TC 4.A.2.1.4)/PTS system D-fructose-specific IIC component (F1P-forming), Frc family (TC 4.A.2.1.4) K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
C 00052 Galactose metabolism [PATH:rix00052]
D RO1_31390 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D RO1_27610 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D RO1_26510 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D RO1_26520 UTP-hexose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D RO1_34890 Nucleoside-diphosphate-sugar epimerases K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RO1_35320 RmlD substrate binding domain. K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RO1_18010 alpha-phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RO1_37000 alpha-phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RO1_41480 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D RO1_41270 Transcriptional regulator/sugar kinase K25026 glk; glucokinase [EC:2.7.1.2]
D RO1_28130 Beta-galactosidase/beta-glucuronidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D RO1_26480 Beta-galactosidase/beta-glucuronidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D RO1_08710 Beta-galactosidase/beta-glucuronidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D RO1_28140 Beta galactosidase small chain. K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D RO1_10620 Beta-galactosidase/beta-glucuronidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D RO1_22020 Beta-galactosidase/beta-glucuronidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D RO1_22090 Beta-galactosidase K12308 bgaB; beta-galactosidase [EC:3.2.1.23]
D RO1_12810 Beta-galactosidase K12308 bgaB; beta-galactosidase [EC:3.2.1.23]
D RO1_26290 Beta-galactosidase K12308 bgaB; beta-galactosidase [EC:3.2.1.23]
D RO1_35420 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D RO1_18030 Alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D RO1_10650 Alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D RO1_31280 Alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D RO1_22250 Melibiase. K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D RO1_25700 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D RO1_04120 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D RO1_01220 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D RO1_36620 Alpha-glucosidases, family 31 of glycosyl hydrolases K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D RO1_09750 Glycosidases K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10]
D RO1_31270 Glycosidases K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10]
D RO1_25660 Glycosidases K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10]
C 00053 Ascorbate and aldarate metabolism [PATH:rix00053]
D RO1_20990 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D RO1_22110 Beta-galactosidase/beta-glucuronidase K01195 uidA; beta-glucuronidase [EC:3.2.1.31]
D RO1_13660 Sugar phosphate isomerases/epimerases K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22]
D RO1_27600 L-ribulose 5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
C 00500 Starch and sucrose metabolism [PATH:rix00500]
D RO1_36620 Alpha-glucosidases, family 31 of glycosyl hydrolases K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D RO1_31240 Glycosidases K00690 E2.4.1.7; sucrose phosphorylase [EC:2.4.1.7]
D RO1_19090 Beta-glucosidase-related glycosidases K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RO1_10350 Beta-glucosidase-related glycosidases K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RO1_41100 Beta-glucosidase-related glycosidases K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RO1_41110 Beta-glucosidase-related glycosidases K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RO1_41410 Beta-glucosidase-related glycosidases K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RO1_26300 Beta-glucosidase-related glycosidases K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RO1_03390 Beta-glucosidase-related glycosidases K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RO1_24560 exo-1,4-beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RO1_07030 Beta-glucosidase-related glycosidases K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RO1_07090 Beta-glucosidase-related glycosidases K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RO1_07100 Beta-glucosidase-related glycosidases K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RO1_35910 Beta-glucosidase-related glycosidases K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RO1_35980 Beta-glucosidase-related glycosidases K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RO1_36000 Beta-glucosidase-related glycosidases K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RO1_36010 Beta-glucosidase-related glycosidases K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RO1_03610 Beta-glucosidase-related glycosidases K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RO1_18130 mannose-6-phosphate isomerase, class I/beta-galactosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D RO1_39790 Endoglucanase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D RO1_02960 cellobiose phosphorylase K00702 E2.4.1.20; cellobiose phosphorylase [EC:2.4.1.20]
D RO1_08800 hypothetical protein K00702 E2.4.1.20; cellobiose phosphorylase [EC:2.4.1.20]
D RO1_36730 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D RO1_36740 glucose-1-phosphate adenylyltransferase, GlgD subunit K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D RO1_12540 glycogen/starch synthases, ADP-glucose type K00703 glgA; starch synthase [EC:2.4.1.21]
D RO1_14950 glycogen/starch synthases, ADP-glucose type K00703 glgA; starch synthase [EC:2.4.1.21]
D RO1_31890 alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D RO1_21540 glycogen/starch/alpha-glucan phosphorylases K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D RO1_03820 glycogen/starch/alpha-glucan phosphorylases K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D RO1_25680 pullulanase, type I K01200 pulA; pullulanase [EC:3.2.1.41]
D RO1_25110 Glycosidases K01176 AMY; alpha-amylase [EC:3.2.1.1]
D RO1_30550 Glycosidases K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135]
D RO1_21230 Glycosidases K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135]
D RO1_09750 Glycosidases K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10]
D RO1_31270 Glycosidases K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10]
D RO1_25660 Glycosidases K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10]
D RO1_10860 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D RO1_25150 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D RO1_03430 beta-phosphoglucomutase K01838 pgmB; beta-phosphoglucomutase [EC:5.4.2.6]
D RO1_02480 Type II secretory pathway, pullulanase PulA and related glycosidases K01214 ISA; isoamylase [EC:3.2.1.68]
D RO1_18010 alpha-phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RO1_37000 alpha-phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RO1_41480 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D RO1_41270 Transcriptional regulator/sugar kinase K25026 glk; glucokinase [EC:2.7.1.2]
D RO1_19460 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RO1_31290 Sugar kinases, ribokinase family K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:rix00520]
D RO1_17480 Beta-glucosidase-related glycosidases K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D RO1_03500 Beta-glucosidase-related glycosidases K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D RO1_41420 N-acetyl-beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D RO1_08790 chitobiose phosphorylase K18675 chbP; N,N'-diacetylchitobiose phosphorylase [EC:2.4.1.280]
D RO1_07600 PTS system, glucose-like IIB component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D RO1_19450 N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D RO1_19430 glucosamine-6-phosphate isomerase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D RO1_31290 Sugar kinases, ribokinase family K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D RO1_17860 glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D RO1_34690 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D RO1_36760 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D RO1_13020 hypothetical protein K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D RO1_01400 UDP-glucose pyrophosphorylase K00972 UAP1; UDP-N-acetylglucosamine/UDP-N-acetylgalactosamine diphosphorylase [EC:2.7.7.23 2.7.7.83]
D RO1_36830 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D RO1_24920 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D RO1_11910 Putative N-acetylmannosamine-6-phosphate epimerase K01788 nanE; N-acylglucosamine-6-phosphate 2-epimerase [EC:5.1.3.9]
D RO1_30060 Alpha-L-arabinofuranosidase K01209 abfA; alpha-L-arabinofuranosidase [EC:3.2.1.55]
D RO1_38050 Alpha-L-arabinofuranosidase K01209 abfA; alpha-L-arabinofuranosidase [EC:3.2.1.55]
D RO1_38340 Alpha-L-arabinofuranosidase K01209 abfA; alpha-L-arabinofuranosidase [EC:3.2.1.55]
D RO1_08620 Alpha-L-arabinofuranosidase K01209 abfA; alpha-L-arabinofuranosidase [EC:3.2.1.55]
D RO1_29850 hypothetical protein K01209 abfA; alpha-L-arabinofuranosidase [EC:3.2.1.55]
D RO1_30340 Alpha-L-arabinofuranosidase K01209 abfA; alpha-L-arabinofuranosidase [EC:3.2.1.55]
D RO1_19920 Nucleoside-diphosphate-sugar epimerases K08678 UXS1; UDP-glucuronate decarboxylase [EC:4.1.1.35]
D RO1_35130 Nucleoside-diphosphate-sugar epimerases K08678 UXS1; UDP-glucuronate decarboxylase [EC:4.1.1.35]
D RO1_14860 Beta-xylosidase K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37]
D RO1_29910 Beta-xylosidase K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37]
D RO1_30310 Beta-xylosidase K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37]
D RO1_13630 Beta-xylosidase K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37]
D RO1_26390 Beta-xylosidase K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37]
D RO1_03440 Beta-xylosidase K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37]
D RO1_41480 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D RO1_41270 Transcriptional regulator/sugar kinase K25026 glk; glucokinase [EC:2.7.1.2]
D RO1_18010 alpha-phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RO1_37000 alpha-phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RO1_20990 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D RO1_26510 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D RO1_26520 UTP-hexose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D RO1_34890 Nucleoside-diphosphate-sugar epimerases K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RO1_35320 RmlD substrate binding domain. K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RO1_35420 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D RO1_19460 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RO1_20950 Mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D RO1_20930 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D RO1_36730 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D RO1_36740 glucose-1-phosphate adenylyltransferase, GlgD subunit K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:rix00620]
D RO1_00510 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D RO1_00520 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D RO1_07500 pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D RO1_38100 formate acetyltransferase 1 K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D RO1_22690 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D RO1_01130 phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D RO1_02930 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RO1_01360 Acylphosphatases K01512 acyP; acylphosphatase [EC:3.6.1.7]
D RO1_41870 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D RO1_12300 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D RO1_21860 Zn-dependent hydrolases, including glyoxylases K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D RO1_23780 Malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D RO1_15610 Pyruvate/oxaloacetate carboxyltransferase K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D RO1_15620 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D RO1_24620 hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D RO1_24630 hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D RO1_15280 phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D RO1_07940 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D RO1_42230 Isopropylmalate/homocitrate/citramalate synthases K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:rix00630]
D RO1_33800 Citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D RO1_15320 Citrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D RO1_11370 Citrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D RO1_19160 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D RO1_07450 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D RO1_03790 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D RO1_05130 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RO1_24860 Uncharacterized protein related to glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RO1_04060 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RO1_05860 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D RO1_27530 lactaldehyde reductase K00048 fucO; lactaldehyde reductase [EC:1.1.1.77]
D RO1_30600 hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region K03779 ttdA; L(+)-tartrate dehydratase alpha subunit [EC:4.2.1.32]
D RO1_30610 hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region K03780 ttdB; L(+)-tartrate dehydratase beta subunit [EC:4.2.1.32]
D RO1_17310 Entner-Doudoroff aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
C 00640 Propanoate metabolism [PATH:rix00640]
D RO1_22690 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D RO1_01130 phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D RO1_00510 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D RO1_00520 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D RO1_38100 formate acetyltransferase 1 K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D RO1_16590 Acyl-CoA dehydrogenases K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D RO1_15320 Citrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D RO1_11370 Citrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D RO1_41870 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D RO1_12300 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D RO1_28160 methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3]
D RO1_11260 methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3]
D RO1_14520 methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3]
D RO1_27530 lactaldehyde reductase K00048 fucO; lactaldehyde reductase [EC:1.1.1.77]
C 00650 Butanoate metabolism [PATH:rix00650]
D RO1_16580 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D RO1_21290 Enoyl-CoA hydratase/carnithine racemase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D RO1_16590 Acyl-CoA dehydrogenases K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D RO1_15620 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D RO1_15630 Biotin carboxyl carrier protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D RO1_15640 sodium pump decarboxylases, gamma subunit K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta
D RO1_38100 formate acetyltransferase 1 K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D RO1_00510 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D RO1_00520 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D RO1_07500 pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D RO1_17160 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RO1_05290 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RO1_13140 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D RO1_17170 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:rix00660]
D RO1_17160 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RO1_05290 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RO1_13140 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D RO1_17170 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D RO1_13190 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D RO1_13200 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D RO1_05270 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:rix00562]
D RO1_26250 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:rix00190]
D RO1_31510 ATP synthase F1 subcomplex alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D RO1_41050 ATP synthase F1 subcomplex beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D RO1_31530 ATP synthase F1 subcomplex beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D RO1_41040 ATP synthase, F1 gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D RO1_31520 ATP synthase F1 subcomplex gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D RO1_41020 ATP synthase, F1 delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D RO1_31500 ATP synthase F1 subcomplex delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D RO1_41060 ATP synthase F1 subcomplex epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D RO1_31540 ATP synthase F1 subcomplex epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D RO1_31470 ATP synthase F0 subcomplex A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D RO1_41010 ATP synthase F0 subcomplex B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D RO1_31490 ATP synthase F0 subcomplex B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D RO1_41000 ATP synthase F0 subcomplex C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D RO1_31480 ATP synthase F0 subcomplex C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D RO1_17580 Archaeal/vacuolar-type H+-ATPase subunit B K02118 ATPVB; V/A-type H+/Na+-transporting ATPase subunit B
D RO1_17590 H(+)-transporting ATP synthase, vacuolar type, subunit D K02120 ATPVD; V/A-type H+/Na+-transporting ATPase subunit D
D RO1_17550 Archaeal/vacuolar-type H+-ATPase subunit F K02122 ATPVF; V/A-type H+/Na+-transporting ATPase subunit F
D RO1_17510 hypothetical protein K02107 ATPVG; V/A-type H+/Na+-transporting ATPase subunit G/H
D RO1_17530 Archaeal/vacuolar-type H+-ATPase subunit I K02123 ATPVI; V/A-type H+/Na+-transporting ATPase subunit I
D RO1_17540 ATP synthase subunit C. K02124 ATPVK; V/A-type H+/Na+-transporting ATPase subunit K
D RO1_07640 Inorganic pyrophosphatase/exopolyphosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1]
D RO1_09930 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:rix00710]
D RO1_27440 3-phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D RO1_27430 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RO1_24870 fructose-1,6-bisphosphate aldolase, class II, various bacterial and amitochondriate protist K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RO1_05570 Uncharacterized protein conserved in bacteria K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D RO1_01550 Transketolase, N-terminal subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RO1_01560 Transketolase, C-terminal subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RO1_27580 Transketolase, N-terminal subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RO1_27590 Transketolase, C-terminal subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RO1_39560 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D RO1_39460 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D RO1_27570 transaldolase, putative, TalC family K00616 TALDO1; transaldolase [EC:2.2.1.2]
D RO1_15280 phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D RO1_07940 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
C 00720 Other carbon fixation pathways [PATH:rix00720]
D RO1_00510 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D RO1_00520 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D RO1_07500 pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D RO1_07940 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D RO1_24620 hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D RO1_24630 hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D RO1_15030 isocitrate dehydrogenase, NADP-dependent, eukaryotic type K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D RO1_14910 Formate-tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D RO1_18160 methenyltetrahydrofolate cyclohydrolase/5,10-methylenetetrahydrofolate dehydrogenase (NADP+) K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D RO1_18170 Formimidoyltetrahydrofolate cyclodeaminase K01500 fchA; methenyltetrahydrofolate cyclohydrolase [EC:3.5.4.9]
D RO1_10400 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D RO1_01130 phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D RO1_22690 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00680 Methane metabolism [PATH:rix00680]
D RO1_04060 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RO1_36490 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RO1_27160 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RO1_24870 fructose-1,6-bisphosphate aldolase, class II, various bacterial and amitochondriate protist K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RO1_05570 Uncharacterized protein conserved in bacteria K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D RO1_25700 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D RO1_04120 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D RO1_01220 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D RO1_22690 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D RO1_01130 phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D RO1_00510 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D RO1_00520 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D RO1_16940 Fructose-2,6-bisphosphatase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D RO1_27480 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D RO1_05310 Phosphoglycerate dehydrogenase and related dehydrogenases K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D RO1_05300 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D RO1_22950 phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein K02203 thrH; phosphoserine / homoserine phosphotransferase [EC:3.1.3.3 2.7.1.39]
C 00910 Nitrogen metabolism [PATH:rix00910]
D RO1_26150 hydroxylamine reductase K05601 hcp; hydroxylamine reductase [EC:1.7.99.1]
D RO1_03190 hydroxylamine reductase K05601 hcp; hydroxylamine reductase [EC:1.7.99.1]
D RO1_10050 Dioxygenases related to 2-nitropropane dioxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D RO1_41920 Glutamate dehydrogenase/leucine dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D RO1_05130 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RO1_24860 Uncharacterized protein related to glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RO1_23620 Glutamate synthase domain 2 K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D RO1_11110 sulfide dehydrogenase (flavoprotein) subunit SudA K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D RO1_23630 glutamate synthase (NADH) small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D RO1_02920 Carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00920 Sulfur metabolism [PATH:rix00920]
D RO1_37140 sulfate/thiosulfate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D RO1_37150 sulfate ABC transporter, permease protein CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D RO1_37160 sulfate ABC transporter, permease protein CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D RO1_37170 sulfate ABC transporter, ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D RO1_37210 sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D RO1_37200 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D RO1_10170 Exopolyphosphatase-related proteins K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D RO1_17090 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D RO1_41700 Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits K00385 asrC; anaerobic sulfite reductase subunit C
D RO1_20280 Rhodanese-related sulfurtransferase K02439 glpE; thiosulfate sulfurtransferase [EC:2.8.1.1]
D RO1_22440 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D RO1_42310 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D RO1_07660 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:rix00061]
D RO1_41780 acyl carrier protein K02078 acpP; acyl carrier protein
D RO1_22740 acyl carrier protein K02078 acpP; acyl carrier protein
D RO1_41800 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D RO1_41850 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D RO1_41820 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D RO1_02470 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RO1_41810 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RO1_41790 putative enoyl-(acyl-carrier-protein) reductase II K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:rix00071]
D RO1_16590 Acyl-CoA dehydrogenases K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
C 00073 Cutin, suberine and wax biosynthesis
C 00074 Mycolic acid biosynthesis
D RO1_41780 acyl carrier protein K02078 acpP; acyl carrier protein
D RO1_22740 acyl carrier protein K02078 acpP; acyl carrier protein
D RO1_41800 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:rix00561]
D RO1_05860 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D RO1_00770 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D RO1_22730 phosphate:acyl-[acyl carrier protein] acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D RO1_23450 acyl-phosphate glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D RO1_38250 Predicted membrane protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D RO1_14330 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D RO1_38180 1-acyl-sn-glycerol-3-phosphate acyltransferases K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D RO1_38260 Monogalactosyldiacylglycerol synthase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
D RO1_18030 Alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D RO1_10650 Alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D RO1_31280 Alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D RO1_22250 Melibiase. K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
C 00564 Glycerophospholipid metabolism [PATH:rix00564]
D RO1_23460 glycerol 3-phosphate dehydrogenase (NAD(P)+) K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D RO1_00790 Predicted dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D RO1_23450 acyl-phosphate glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D RO1_38250 Predicted membrane protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D RO1_14330 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D RO1_38180 1-acyl-sn-glycerol-3-phosphate acyltransferases K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D RO1_00560 Lysophospholipase K01048 pldB; lysophospholipase [EC:3.1.1.5]
D RO1_18880 Glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D RO1_18910 Glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D RO1_00550 Glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D RO1_09830 CDP-diglyceride synthetase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D RO1_13960 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D RO1_33790 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D RO1_27020 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D RO1_33880 Phosphatidylglycerophosphate synthase K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41]
D RO1_26120 Glycerol dehydrogenase and related enzymes K00096 araM; glycerol-1-phosphate dehydrogenase [NAD(P)+] [EC:1.1.1.261]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism [PATH:rix00600]
D RO1_28130 Beta-galactosidase/beta-glucuronidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D RO1_26480 Beta-galactosidase/beta-glucuronidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D RO1_08710 Beta-galactosidase/beta-glucuronidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D RO1_28140 Beta galactosidase small chain. K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D RO1_10620 Beta-galactosidase/beta-glucuronidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D RO1_22020 Beta-galactosidase/beta-glucuronidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D RO1_18030 Alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D RO1_10650 Alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D RO1_31280 Alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D RO1_22250 Melibiase. K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D RO1_41420 N-acetyl-beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:rix00230]
D RO1_12220 NTP pyrophosphohydrolases including oxidative damage repair enzymes K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D RO1_12100 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D RO1_18010 alpha-phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RO1_37000 alpha-phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RO1_36680 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D RO1_27510 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D RO1_17720 phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D RO1_17710 formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D RO1_27340 phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D RO1_17690 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D RO1_27500 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D RO1_27520 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D RO1_22650 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D RO1_22640 IMP cyclohydrolase-like protein. K11176 purO; IMP cyclohydrolase [EC:3.5.4.10]
D RO1_31790 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D RO1_31700 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D RO1_10910 purine nucleoside phosphorylase I, inosine and guanosine-specific K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D RO1_20320 non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D RO1_16840 GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit/GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D RO1_13930 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D RO1_30790 Guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D RO1_39080 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D RO1_39240 deoxyguanosinetriphosphate triphosphohydrolase, putative K01129 dgt; dGTPase [EC:3.1.5.1]
D RO1_21850 (p)ppGpp synthetase, RelA/SpoT family K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D RO1_09920 Exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D RO1_25900 Uncharacterized protein conserved in bacteria K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5]
D RO1_27030 Uncharacterized protein conserved in bacteria K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5]
D RO1_01410 Uncharacterized protein conserved in bacteria K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5]
D RO1_20630 adenylate cyclase K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D RO1_11300 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D RO1_23260 Adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D RO1_17930 adenine deaminase K01486 ade; adenine deaminase [EC:3.5.4.2]
D RO1_31760 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D RO1_02100 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D RO1_37210 sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D RO1_37200 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D RO1_02920 Carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00240 Pyrimidine metabolism [PATH:rix00240]
D RO1_16520 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D RO1_16510 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D RO1_39340 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D RO1_39330 Aspartate carbamoyltransferase, regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D RO1_21800 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D RO1_21820 dihydroorotate dehydrogenase (subfamily 1) family protein K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14]
D RO1_21810 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit
D RO1_02430 orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D RO1_09800 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D RO1_04590 MAF protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D RO1_24970 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D RO1_15570 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D RO1_14400 hypothetical protein K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D RO1_12620 uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D RO1_39280 Uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D RO1_31790 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D RO1_31700 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D RO1_31420 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D RO1_31760 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D RO1_14760 thymidine phosphorylase K00756 pdp; pyrimidine-nucleoside phosphorylase [EC:2.4.2.2]
D RO1_15310 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D RO1_39080 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D RO1_31430 Deoxycytidylate deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D RO1_23470 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D RO1_14650 Predicted alternative thymidylate synthase K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:rix00250]
D RO1_26550 Aspartate/tyrosine/aromatic aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D RO1_13880 Aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D RO1_10770 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D RO1_05670 aspartate--ammonia ligase, AsnA-type K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D RO1_20900 asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D RO1_06480 asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D RO1_06310 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D RO1_12970 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D RO1_11300 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D RO1_23260 Adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D RO1_27520 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D RO1_39340 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D RO1_39330 Aspartate carbamoyltransferase, regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D RO1_23620 Glutamate synthase domain 2 K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D RO1_11110 sulfide dehydrogenase (flavoprotein) subunit SudA K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D RO1_23630 glutamate synthase (NADH) small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D RO1_41920 Glutamate dehydrogenase/leucine dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D RO1_05130 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RO1_24860 Uncharacterized protein related to glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RO1_16520 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D RO1_16510 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D RO1_17860 glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D RO1_27510 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:rix00260]
D RO1_12980 aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms) K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D RO1_16460 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D RO1_22950 phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein K02203 thrH; phosphoserine / homoserine phosphotransferase [EC:3.1.3.3 2.7.1.39]
D RO1_15390 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D RO1_10760 L-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D RO1_04060 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RO1_05860 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D RO1_16940 Fructose-2,6-bisphosphatase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D RO1_27480 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D RO1_05310 Phosphoglycerate dehydrogenase and related dehydrogenases K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D RO1_05300 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D RO1_42650 L-serine dehydratase, iron-sulfur-dependent, beta subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D RO1_42660 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D RO1_22790 threonine dehydratase, medium form K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D RO1_10740 tryptophan synthase, alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D RO1_10730 tryptophan synthase, beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D RO1_08030 pyridoxal-phosphate dependent TrpB-like enzyme K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:rix00270]
D RO1_22440 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D RO1_42310 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D RO1_12720 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D RO1_40000 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D RO1_22390 methionine synthase (B12-dependent) K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D RO1_36870 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D RO1_05610 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D RO1_22980 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D RO1_10920 Cytosine deaminase and related metal-dependent hydrolases K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]
D RO1_38600 methylthioribose-1-phosphate isomerase K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23]
D RO1_42050 DNA-methyltransferase (dcm) K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RO1_01720 DNA-methyltransferase (dcm) K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RO1_23890 DNA-methyltransferase (dcm) K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RO1_23900 Site-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RO1_24320 Site-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RO1_22970 LuxS protein involved in autoinducer AI2 synthesis K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D RO1_12980 aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms) K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D RO1_16460 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D RO1_07660 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D RO1_42300 O-acetylhomoserine sulfhydrolase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D RO1_36140 O-acetylhomoserine sulfhydrolase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D RO1_03740 branched chain amino acid aminotransferase apoenzyme K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RO1_26550 Aspartate/tyrosine/aromatic aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D RO1_41870 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D RO1_12300 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D RO1_42650 L-serine dehydratase, iron-sulfur-dependent, beta subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D RO1_42660 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D RO1_05310 Phosphoglycerate dehydrogenase and related dehydrogenases K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D RO1_05300 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:rix00280]
D RO1_03740 branched chain amino acid aminotransferase apoenzyme K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RO1_16590 Acyl-CoA dehydrogenases K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:rix00290]
D RO1_22790 threonine dehydratase, medium form K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D RO1_13190 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D RO1_13200 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D RO1_05270 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D RO1_17160 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RO1_05290 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RO1_13140 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D RO1_17170 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D RO1_13150 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D RO1_19410 Dihydroxyacid dehydratase/phosphogluconate dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D RO1_05280 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D RO1_03740 branched chain amino acid aminotransferase apoenzyme K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RO1_42230 Isopropylmalate/homocitrate/citramalate synthases K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:rix00300]
D RO1_16460 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D RO1_12980 aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms) K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D RO1_05550 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D RO1_05560 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D RO1_06360 acetylornithine aminotransferase apoenzyme K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D RO1_11620 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D RO1_07670 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D RO1_22920 LL-diaminopimelate aminotransferase apoenzyme K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D RO1_03930 Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D RO1_39360 UDP-N-acetylmuramyl-tripeptide synthetases K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D RO1_38170 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation
C 00220 Arginine biosynthesis [PATH:rix00220]
D RO1_32910 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D RO1_06310 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D RO1_12970 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D RO1_30980 urea carboxylase K01941 uca; urea carboxylase [EC:6.3.4.6]
D RO1_30990 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases K01457 atzF; allophanate hydrolase [EC:3.5.1.54]
D RO1_05130 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RO1_24860 Uncharacterized protein related to glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RO1_16520 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D RO1_16510 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D RO1_02920 Carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D RO1_41920 Glutamate dehydrogenase/leucine dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D RO1_26550 Aspartate/tyrosine/aromatic aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D RO1_06340 glutamate N-acetyltransferase/amino-acid acetyltransferase K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D RO1_06330 N-acetylglutamate synthase K22477 argO; N-acetylglutamate synthase [EC:2.3.1.1]
D RO1_06350 acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D RO1_06320 N-acetyl-gamma-glutamyl-phosphate reductase, common form K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D RO1_06360 acetylornithine aminotransferase apoenzyme K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:rix00330]
D RO1_34360 Uncharacterized protein, putative amidase K01470 E3.5.2.10; creatinine amidohydrolase [EC:3.5.2.10]
D RO1_11930 N-methylhydantoinase A/acetone carboxylase, beta subunit K01473 hyuA; N-methylhydantoinase A [EC:3.5.2.14]
D RO1_30780 Arginine/lysine/ornithine decarboxylases K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D RO1_05600 arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D RO1_05640 agmatine deiminase K10536 aguA; agmatine deiminase [EC:3.5.3.12]
D RO1_05650 N-carbamoylputrescine amidase K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53]
D RO1_05620 carboxynorspermidine dehydrogenase K27502 capadh; carboxyaminopropylagmatine dehydrogenase [EC:1.5.1.55]
D RO1_05610 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D RO1_21240 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D RO1_13290 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D RO1_13320 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D RO1_26550 Aspartate/tyrosine/aromatic aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:rix00340]
D RO1_14090 ATP phosphoribosyltransferase catalytic subunit K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D RO1_14080 ATP phosphoribosyltransferase regulatory subunit K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit
D RO1_14130 phosphoribosyl-ATP pyrophosphohydrolase K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]
D RO1_05120 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase, eukaryotic type K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D RO1_22340 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D RO1_22350 imidazoleglycerol phosphate synthase, cyclase subunit K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D RO1_14110 Imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D RO1_26560 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RO1_27420 histidinol phosphate phosphatase HisJ family K04486 E3.1.3.15B; histidinol-phosphatase (PHP family) [EC:3.1.3.15]
D RO1_14100 histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
C 00350 Tyrosine metabolism [PATH:rix00350]
D RO1_26550 Aspartate/tyrosine/aromatic aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D RO1_26560 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00360 Phenylalanine metabolism [PATH:rix00360]
D RO1_16580 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D RO1_26550 Aspartate/tyrosine/aromatic aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D RO1_26560 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RO1_35990 NADH:flavin oxidoreductases, Old Yellow Enzyme family K10797 enr; 2-enoate reductase [EC:1.3.1.31]
C 00380 Tryptophan metabolism
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:rix00400]
D RO1_32190 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D RO1_12250 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D RO1_14430 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D RO1_38470 3-dehydroquinate dehydratase, type I K03785 aroD; 3-dehydroquinate dehydratase I [EC:4.2.1.10]
D RO1_12260 3-dehydroquinate dehydratase, type I K03785 aroD; 3-dehydroquinate dehydratase I [EC:4.2.1.10]
D RO1_38530 Shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D RO1_36810 Shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D RO1_05170 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D RO1_05150 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D RO1_10690 anthranilate synthase, component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D RO1_10700 anthranilate synthase, component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D RO1_10750 anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D RO1_10710 indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D RO1_10740 tryptophan synthase, alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D RO1_10730 tryptophan synthase, beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D RO1_08030 pyridoxal-phosphate dependent TrpB-like enzyme K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D RO1_09900 Prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D RO1_16450 ACT domain-containing protein K06209 pheB; chorismate mutase [EC:5.4.99.5]
D RO1_15120 Prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D RO1_26550 Aspartate/tyrosine/aromatic aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D RO1_26560 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:rix00410]
D RO1_24600 L-aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D RO1_24590 pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D RO1_16590 Acyl-CoA dehydrogenases K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
C 00430 Taurine and hypotaurine metabolism [PATH:rix00430]
D RO1_01130 phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D RO1_22690 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
D RO1_19910 phosphoenolpyruvate phosphomutase K23999 fom1; phosphoenolpyruvate phosphomutase / 2-hydroxyethylphosphonate cytidylyltransferase [EC:5.4.2.9 2.7.7.104]
C 00450 Selenocompound metabolism [PATH:rix00450]
D RO1_07660 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D RO1_12720 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D RO1_40000 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D RO1_22390 methionine synthase (B12-dependent) K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D RO1_25220 Thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D RO1_37210 sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D RO1_37200 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D RO1_42540 selenophosphate synthase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D RO1_00860 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:rix00460]
D RO1_19090 Beta-glucosidase-related glycosidases K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RO1_10350 Beta-glucosidase-related glycosidases K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RO1_41100 Beta-glucosidase-related glycosidases K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RO1_41110 Beta-glucosidase-related glycosidases K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RO1_41410 Beta-glucosidase-related glycosidases K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RO1_26300 Beta-glucosidase-related glycosidases K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RO1_03390 Beta-glucosidase-related glycosidases K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RO1_24560 exo-1,4-beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RO1_07030 Beta-glucosidase-related glycosidases K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RO1_07090 Beta-glucosidase-related glycosidases K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RO1_07100 Beta-glucosidase-related glycosidases K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RO1_35910 Beta-glucosidase-related glycosidases K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RO1_35980 Beta-glucosidase-related glycosidases K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RO1_36000 Beta-glucosidase-related glycosidases K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RO1_36010 Beta-glucosidase-related glycosidases K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RO1_03610 Beta-glucosidase-related glycosidases K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RO1_18130 mannose-6-phosphate isomerase, class I/beta-galactosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D RO1_10770 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D RO1_05670 aspartate--ammonia ligase, AsnA-type K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D RO1_04060 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:rix00470]
D RO1_14990 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D RO1_38160 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RO1_11520 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D RO1_11620 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D RO1_07670 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D RO1_03930 Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:rix00480]
D RO1_14020 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D RO1_15030 isocitrate dehydrogenase, NADP-dependent, eukaryotic type K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D RO1_05610 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:rix00511]
D RO1_28130 Beta-galactosidase/beta-glucuronidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D RO1_26480 Beta-galactosidase/beta-glucuronidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D RO1_08710 Beta-galactosidase/beta-glucuronidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D RO1_28140 Beta galactosidase small chain. K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D RO1_10620 Beta-galactosidase/beta-glucuronidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D RO1_22020 Beta-galactosidase/beta-glucuronidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D RO1_41420 N-acetyl-beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D RO1_08700 Alpha-mannosidase K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24]
D RO1_41300 Alpha-mannosidase K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24]
D RO1_41390 Alpha-mannosidase K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24]
D RO1_36470 Beta-galactosidase/beta-glucuronidase K01192 E3.2.1.25; beta-mannosidase [EC:3.2.1.25]
D RO1_12820 Alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:rix00541]
D RO1_34890 Nucleoside-diphosphate-sugar epimerases K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RO1_35320 RmlD substrate binding domain. K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RO1_35420 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D RO1_20990 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D RO1_34760 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RO1_34750 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D RO1_20340 dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D RO1_34770 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D RO1_34710 RmlD substrate binding domain. K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D RO1_20950 Mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D RO1_20930 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D RO1_36760 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D RO1_13020 hypothetical protein K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
C 00550 Peptidoglycan biosynthesis [PATH:rix00550]
D RO1_36830 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D RO1_24920 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D RO1_36720 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D RO1_11520 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D RO1_21100 UDP-N-acetylmuramoylalanine--D-glutamate ligase K23169 murD2; UDP-N-acetylmuramoyl-L-alanine---L-glutamate ligase [EC:6.3.2.53]
D RO1_21090 hypothetical protein K23170 murL; UDP-N-acetyl-alpha-D-muramoyl-L-alanyl-L-glutamate epimerase [EC:5.1.1.23]
D RO1_39360 UDP-N-acetylmuramyl-tripeptide synthetases K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D RO1_38160 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RO1_38170 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D RO1_09820 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D RO1_14220 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D RO1_14930 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D RO1_11510 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D RO1_32160 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D RO1_16170 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D RO1_41460 penicillin-binding protein, 1A family K18770 pbpD; penicillin-binding protein 4 [EC:2.4.99.28 3.4.16.4]
D RO1_11490 Cell division protein FtsI/penicillin-binding protein 2 K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein)
D RO1_11500 Cell division protein FtsI/penicillin-binding protein 2 K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein)
D RO1_13410 Cell division protein FtsI/penicillin-binding protein 2 K05364 pbpA; penicillin-binding protein A
D RO1_30730 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D RO1_15660 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D RO1_15700 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D RO1_14510 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D RO1_43140 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
C 00552 Teichoic acid biosynthesis [PATH:rix00552]
D RO1_14220 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D RO1_14930 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D RO1_20890 bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D RO1_16300 Teichoic acid biosynthesis proteins K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D RO1_21050 cell envelope-related function transcriptional attenuator common domain K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D RO1_31820 cell envelope-related function transcriptional attenuator common domain K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D RO1_35060 Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC K18704 tarL; CDP-ribitol ribitolphosphotransferase / teichoic acid ribitol-phosphate polymerase [EC:2.7.8.14 2.7.8.47]
D RO1_38260 Monogalactosyldiacylglycerol synthase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
D RO1_19840 LPS biosynthesis protein K07271 licD; lipopolysaccharide cholinephosphotransferase [EC:2.7.8.-]
D RO1_19860 LPS biosynthesis protein K07271 licD; lipopolysaccharide cholinephosphotransferase [EC:2.7.8.-]
D RO1_19950 LPS biosynthesis protein K07271 licD; lipopolysaccharide cholinephosphotransferase [EC:2.7.8.-]
D RO1_19990 LPS biosynthesis protein K07271 licD; lipopolysaccharide cholinephosphotransferase [EC:2.7.8.-]
D RO1_20000 LPS biosynthesis protein K07271 licD; lipopolysaccharide cholinephosphotransferase [EC:2.7.8.-]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:rix00543]
D RO1_21740 Predicted membrane protein involved in D-alanine export K19294 algI; alginate O-acetyltransferase complex protein AlgI
D RO1_27120 Predicted membrane protein involved in D-alanine export K19294 algI; alginate O-acetyltransferase complex protein AlgI
D RO1_27400 Predicted membrane protein involved in D-alanine export K19294 algI; alginate O-acetyltransferase complex protein AlgI
D RO1_22440 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:rix00730]
D RO1_22500 hydroxymethylpyrimidine synthase K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D RO1_10530 phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D RO1_42280 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RO1_07430 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RO1_23050 thiazole biosynthesis/tRNA modification protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D RO1_12670 tyrosine lyase ThiH K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19]
D RO1_07850 iron-only hydrogenase maturation protein HydG K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19]
D RO1_12460 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D RO1_02410 Hydroxyethylthiazole kinase, sugar kinase family K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D RO1_02400 thiamine-phosphate diphosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D RO1_12680 Thiamine monophosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D RO1_39450 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D RO1_39470 thiamine diphosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2]
D RO1_02100 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:rix00740]
D RO1_42400 GTP cyclohydrolase II/3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D RO1_42380 diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D RO1_42410 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D RO1_10190 riboflavin kinase/FMN adenylyltransferase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D RO1_02410 Hydroxyethylthiazole kinase, sugar kinase family K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D RO1_12220 NTP pyrophosphohydrolases including oxidative damage repair enzymes K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D RO1_26810 polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00750 Vitamin B6 metabolism [PATH:rix00750]
D RO1_05300 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D RO1_15390 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D RO1_19500 pyridoxal phosphate synthase yaaD subunit K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6]
D RO1_19510 pyridoxal phosphate synthase yaaE subunit K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6]
C 00760 Nicotinate and nicotinamide metabolism [PATH:rix00760]
D RO1_13880 Aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D RO1_13870 quinolinate synthetase A K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D RO1_13890 nicotinate-nucleotide pyrophosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D RO1_39820 putative nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D RO1_10910 purine nucleoside phosphorylase I, inosine and guanosine-specific K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D RO1_31790 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D RO1_31700 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D RO1_14280 nicotinate (nicotinamide) nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D RO1_05000 NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D RO1_31120 NAD-dependent protein deacetylases, SIR2 family K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D RO1_12480 Predicted sugar kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
C 00770 Pantothenate and CoA biosynthesis [PATH:rix00770]
D RO1_17160 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RO1_05290 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RO1_13140 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D RO1_17170 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D RO1_13150 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D RO1_19410 Dihydroxyacid dehydratase/phosphogluconate dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D RO1_05280 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D RO1_24580 ketopantoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D RO1_24590 pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D RO1_32950 pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D RO1_20250 phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D RO1_13990 pantetheine-phosphate adenylyltransferase, bacterial K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D RO1_22580 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D RO1_10380 Phosphopantetheinyl transferase K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-]
D RO1_03740 branched chain amino acid aminotransferase apoenzyme K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RO1_24600 L-aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
C 00780 Biotin metabolism [PATH:rix00780]
D RO1_41820 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D RO1_02470 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RO1_41810 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RO1_00490 adenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D RO1_00480 dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D RO1_00470 biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D RO1_07840 iron-only hydrogenase maturation protein HydE K01012 bioB; biotin synthase [EC:2.8.1.6]
D RO1_32930 birA, biotin-[acetyl-CoA-carboxylase] ligase region K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism
C 00790 Folate biosynthesis [PATH:rix00790]
D RO1_17140 Dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D RO1_27110 folylpolyglutamate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D RO1_42400 GTP cyclohydrolase II/3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D RO1_42580 molybdenum cofactor biosynthesis protein A, bacterial K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D RO1_42500 GTP cyclohydrolase subunit MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D RO1_42510 molybdopterin adenylyltransferase K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D RO1_30770 Molybdopterin-guanine dinucleotide biosynthesis protein A K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:rix00670]
D RO1_17140 Dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D RO1_14910 Formate-tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D RO1_18160 methenyltetrahydrofolate cyclohydrolase/5,10-methylenetetrahydrofolate dehydrogenase (NADP+) K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D RO1_18170 Formimidoyltetrahydrofolate cyclodeaminase K01500 fchA; methenyltetrahydrofolate cyclohydrolase [EC:3.5.4.9]
D RO1_04060 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RO1_17710 formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D RO1_22650 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D RO1_39390 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D RO1_22390 methionine synthase (B12-dependent) K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D RO1_14650 Predicted alternative thymidylate synthase K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D RO1_10400 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D RO1_13310 5,10-methenyltetrahydrofolate synthetase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:rix00860]
D RO1_41520 uroporphyrin-III C-methyltransferase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4]
D RO1_19340 Cobalamin biosynthesis protein CbiK, Co2+ chelatase K02190 cbiK; sirohydrochlorin cobaltochelatase [EC:4.99.1.3]
D RO1_08380 precorrin-3 methyltransferase K05934 cobJ; precorrin-3B C17-methyltransferase / cobalt-factor III methyltransferase [EC:2.1.1.131 2.1.1.272]
D RO1_08360 precorrin-4 C11-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271]
D RO1_08370 Cobalamin biosynthesis protein CbiG K02189 cbiG; cobalt-precorrin 5A hydrolase [EC:3.7.1.12]
D RO1_08350 cobalamin biosynthesis protein CbiD K02188 cbiD; cobalt-precorrin-5B (C1)-methyltransferase [EC:2.1.1.195]
D RO1_08390 precorrin-6x reductase K00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase / cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196]
D RO1_08400 hydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolysing)/cobyrinate a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D RO1_12850 adenosylcobyric acid synthase (glutamine-hydrolysing) K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D RO1_12910 adenosylcobinamide-phosphate synthase K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D RO1_12870 Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D RO1_12890 Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D RO1_12880 Cobalamin-5-phosphate synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D RO1_12860 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D RO1_12900 Fructose-2,6-bisphosphatase K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73]
D RO1_09020 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase K04720 cobD; threonine-phosphate decarboxylase [EC:4.1.1.81]
D RO1_08340 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase K04720 cobD; threonine-phosphate decarboxylase [EC:4.1.1.81]
D RO1_22110 Beta-galactosidase/beta-glucuronidase K01195 uidA; beta-glucuronidase [EC:3.2.1.31]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis
D RO1_26810 polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:rix00900]
D RO1_12460 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D RO1_09840 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D RO1_38810 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D RO1_21160 4-diphosphocytidyl-2C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D RO1_22410 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D RO1_15560 (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D RO1_26810 polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D RO1_12450 Geranylgeranyl pyrophosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D RO1_09820 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation [PATH:rix00903]
D RO1_04110 Esterase/lipase K14731 mlhB; epsilon-lactone hydrolase [EC:3.1.1.83]
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D RO1_01550 Transketolase, N-terminal subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RO1_01560 Transketolase, C-terminal subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RO1_27580 Transketolase, N-terminal subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RO1_27590 Transketolase, C-terminal subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:rix00523]
D RO1_34760 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RO1_34750 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D RO1_20340 dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D RO1_34770 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D RO1_34710 RmlD substrate binding domain. K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
D RO1_34750 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:rix00946]
D RO1_19090 Beta-glucosidase-related glycosidases K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RO1_10350 Beta-glucosidase-related glycosidases K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RO1_41100 Beta-glucosidase-related glycosidases K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RO1_41110 Beta-glucosidase-related glycosidases K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RO1_41410 Beta-glucosidase-related glycosidases K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RO1_26300 Beta-glucosidase-related glycosidases K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RO1_03390 Beta-glucosidase-related glycosidases K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RO1_24560 exo-1,4-beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RO1_07030 Beta-glucosidase-related glycosidases K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RO1_07090 Beta-glucosidase-related glycosidases K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RO1_07100 Beta-glucosidase-related glycosidases K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RO1_35910 Beta-glucosidase-related glycosidases K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RO1_35980 Beta-glucosidase-related glycosidases K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RO1_36000 Beta-glucosidase-related glycosidases K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RO1_36010 Beta-glucosidase-related glycosidases K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RO1_03610 Beta-glucosidase-related glycosidases K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RO1_18130 mannose-6-phosphate isomerase, class I/beta-galactosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D RO1_07080 Alpha-L-rhamnosidase N-terminal domain./Bacterial alpha-L-rhamnosidase. K05989 ramA; alpha-L-rhamnosidase [EC:3.2.1.40]
D RO1_35930 Alpha-L-rhamnosidase N-terminal domain./Bacterial alpha-L-rhamnosidase. K05989 ramA; alpha-L-rhamnosidase [EC:3.2.1.40]
D RO1_35950 Bacterial alpha-L-rhamnosidase. K05989 ramA; alpha-L-rhamnosidase [EC:3.2.1.40]
D RO1_21990 Bacterial alpha-L-rhamnosidase. K05989 ramA; alpha-L-rhamnosidase [EC:3.2.1.40]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
D RO1_19550 Penicillin V acylase and related amidases K24041 yxeI; penicillin V amidase [EC:3.5.1.11]
D RO1_33910 Penicillin V acylase and related amidases K24041 yxeI; penicillin V amidase [EC:3.5.1.11]
C 00332 Carbapenem biosynthesis [PATH:rix00332]
D RO1_13290 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D RO1_13320 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:rix00261]
D RO1_37210 sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D RO1_37200 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D RO1_12980 aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms) K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D RO1_05550 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D RO1_05560 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:rix00521]
D RO1_41480 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D RO1_41270 Transcriptional regulator/sugar kinase K25026 glk; glucokinase [EC:2.7.1.2]
D RO1_18010 alpha-phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RO1_37000 alpha-phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RO1_26250 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D RO1_34760 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RO1_34750 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D RO1_20340 dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D RO1_34770 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D RO1_34710 RmlD substrate binding domain. K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D RO1_41480 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D RO1_41270 Transcriptional regulator/sugar kinase K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:rix00525]
D RO1_34760 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RO1_34750 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:rix00401]
D RO1_15120 Prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D RO1_26550 Aspartate/tyrosine/aromatic aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D RO1_26560 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D RO1_10690 anthranilate synthase, component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D RO1_10700 anthranilate synthase, component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D RO1_41800 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D RO1_02470 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RO1_41810 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics [PATH:rix00998]
D RO1_41780 acyl carrier protein K02078 acpP; acyl carrier protein
D RO1_22740 acyl carrier protein K02078 acpP; acyl carrier protein
D RO1_19910 phosphoenolpyruvate phosphomutase K23999 fom1; phosphoenolpyruvate phosphomutase / 2-hydroxyethylphosphonate cytidylyltransferase [EC:5.4.2.9 2.7.7.104]
C 00999 Biosynthesis of various plant secondary metabolites [PATH:rix00999]
D RO1_36870 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D RO1_19090 Beta-glucosidase-related glycosidases K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RO1_10350 Beta-glucosidase-related glycosidases K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RO1_41100 Beta-glucosidase-related glycosidases K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RO1_41110 Beta-glucosidase-related glycosidases K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RO1_41410 Beta-glucosidase-related glycosidases K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RO1_26300 Beta-glucosidase-related glycosidases K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RO1_03390 Beta-glucosidase-related glycosidases K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RO1_24560 exo-1,4-beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RO1_07030 Beta-glucosidase-related glycosidases K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RO1_07090 Beta-glucosidase-related glycosidases K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RO1_07100 Beta-glucosidase-related glycosidases K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RO1_35910 Beta-glucosidase-related glycosidases K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RO1_35980 Beta-glucosidase-related glycosidases K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RO1_36000 Beta-glucosidase-related glycosidases K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RO1_36010 Beta-glucosidase-related glycosidases K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RO1_03610 Beta-glucosidase-related glycosidases K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RO1_18130 mannose-6-phosphate isomerase, class I/beta-galactosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:rix00362]
D RO1_15620 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D RO1_15630 Biotin carboxyl carrier protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D RO1_15640 sodium pump decarboxylases, gamma subunit K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta
D RO1_16580 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
C 00627 Aminobenzoate degradation [PATH:rix00627]
D RO1_01360 Acylphosphatases K01512 acyP; acylphosphatase [EC:3.6.1.7]
D RO1_26810 polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D RO1_26800 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases K22958 lpdC; gallate decarboxylase subunit C [EC:4.1.1.59]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation
D RO1_00510 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D RO1_00520 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
C 00791 Atrazine degradation [PATH:rix00791]
D RO1_30990 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases K01457 atzF; allophanate hydrolase [EC:3.5.1.54]
D RO1_30980 urea carboxylase K01941 uca; urea carboxylase [EC:6.3.4.6]
C 00930 Caprolactam degradation
D RO1_04110 Esterase/lipase K14731 mlhB; epsilon-lactone hydrolase [EC:3.1.1.83]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:rix03020]
D RO1_02610 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D RO1_02600 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D RO1_13940 RNA polymerase Rpb6. K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
D RO1_27320 DEAD_2. K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:rix03010]
D RO1_03880 Ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D RO1_09710 SSU ribosomal protein S2P K02967 RP-S2; small subunit ribosomal protein S2
D RO1_02250 SSU ribosomal protein S3P K02982 RP-S3; small subunit ribosomal protein S3
D RO1_02030 SSU ribosomal protein S4P K02986 RP-S4; small subunit ribosomal protein S4
D RO1_31150 SSU ribosomal protein S6P K02990 RP-S6; small subunit ribosomal protein S6
D RO1_02580 ribosomal protein S7, bacterial/organelle K02992 RP-S7; small subunit ribosomal protein S7
D RO1_02180 Ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D RO1_02040 SSU ribosomal protein S11P K02948 RP-S11; small subunit ribosomal protein S11
D RO1_02590 SSU ribosomal protein S12P K02950 RP-S12; small subunit ribosomal protein S12
D RO1_02050 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D RO1_10210 SSU ribosomal protein S15P K02956 RP-S15; small subunit ribosomal protein S15
D RO1_22840 SSU ribosomal protein S16P K02959 RP-S16; small subunit ribosomal protein S16
D RO1_31170 SSU ribosomal protein S18P K02963 RP-S18; small subunit ribosomal protein S18
D RO1_02270 SSU ribosomal protein S19P K02965 RP-S19; small subunit ribosomal protein S19
D RO1_06440 SSU ribosomal protein S20P K02968 RP-S20; small subunit ribosomal protein S20
D RO1_10990 SSU ribosomal protein S21P K02970 RP-S21; small subunit ribosomal protein S21
D RO1_20210 ribosomal protein L1, bacterial/chloroplast K02863 RP-L1; large subunit ribosomal protein L1
D RO1_02290 LSU ribosomal protein L2P K02886 RP-L2; large subunit ribosomal protein L2
D RO1_02320 LSU ribosomal protein L3P K02906 RP-L3; large subunit ribosomal protein L3
D RO1_02310 LSU ribosomal protein L4P K02926 RP-L4; large subunit ribosomal protein L4
D RO1_02170 LSU ribosomal protein L6P K02933 RP-L6; large subunit ribosomal protein L6
D RO1_20240 LSU ribosomal protein L12P K02935 RP-L7; large subunit ribosomal protein L7/L12
D RO1_31320 LSU ribosomal protein L9P K02939 RP-L9; large subunit ribosomal protein L9
D RO1_20200 LSU ribosomal protein L11P K02867 RP-L11; large subunit ribosomal protein L11
D RO1_37570 LSU ribosomal protein L13P K02871 RP-L13; large subunit ribosomal protein L13
D RO1_02210 LSU ribosomal protein L14P K02874 RP-L14; large subunit ribosomal protein L14
D RO1_02120 LSU ribosomal protein L15P K02876 RP-L15; large subunit ribosomal protein L15
D RO1_02240 LSU ribosomal protein L16P K02878 RP-L16; large subunit ribosomal protein L16
D RO1_02010 LSU ribosomal protein L17P K02879 RP-L17; large subunit ribosomal protein L17
D RO1_02160 LSU ribosomal protein L18P K02881 RP-L18; large subunit ribosomal protein L18
D RO1_22900 ribosomal protein L19, bacterial type K02884 RP-L19; large subunit ribosomal protein L19
D RO1_10000 LSU ribosomal protein L20P K02887 RP-L20; large subunit ribosomal protein L20
D RO1_14230 LSU ribosomal protein L21P K02888 RP-L21; large subunit ribosomal protein L21
D RO1_02260 LSU ribosomal protein L22P K02890 RP-L22; large subunit ribosomal protein L22
D RO1_02300 Ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D RO1_02200 LSU ribosomal protein L24P K02895 RP-L24; large subunit ribosomal protein L24
D RO1_14250 LSU ribosomal protein L27P K02899 RP-L27; large subunit ribosomal protein L27
D RO1_13690 hypothetical protein K02902 RP-L28; large subunit ribosomal protein L28
D RO1_02230 LSU ribosomal protein L29P K02904 RP-L29; large subunit ribosomal protein L29
D RO1_02130 LSU ribosomal protein L30P K02907 RP-L30; large subunit ribosomal protein L30
D RO1_06160 LSU ribosomal protein L31P K02909 RP-L31; large subunit ribosomal protein L31
D RO1_20170 LSU ribosomal protein L33P K02913 RP-L33; large subunit ribosomal protein L33
D RO1_24430 LSU ribosomal protein L34P K02914 RP-L34; large subunit ribosomal protein L34
D RO1_09990 LSU ribosomal protein L35P K02916 RP-L35; large subunit ribosomal protein L35
D RO1_R_44060 16S; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RO1_R_44050 23S; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:rix00970]
D RO1_T_43590 RO1_T_43590 K14219 tRNA-Arg; tRNA Arg
D RO1_T_44030 RO1_T_44030 K14219 tRNA-Arg; tRNA Arg
D RO1_T_43470 RO1_T_43470 K14219 tRNA-Arg; tRNA Arg
D RO1_T_43620 RO1_T_43620 K14219 tRNA-Arg; tRNA Arg
D RO1_T_43720 RO1_T_43720 K14219 tRNA-Arg; tRNA Arg
D RO1_T_43740 RO1_T_43740 K14219 tRNA-Arg; tRNA Arg
D RO1_T_43410 RO1_T_43410 K14220 tRNA-Asn; tRNA Asn
D RO1_T_43520 RO1_T_43520 K14220 tRNA-Asn; tRNA Asn
D RO1_T_43980 RO1_T_43980 K14220 tRNA-Asn; tRNA Asn
D RO1_T_43560 RO1_T_43560 K14221 tRNA-Asp; tRNA Asp
D RO1_T_43840 RO1_T_43840 K14221 tRNA-Asp; tRNA Asp
D RO1_T_44000 RO1_T_44000 K14221 tRNA-Asp; tRNA Asp
D RO1_T_43430 RO1_T_43430 K14222 tRNA-Cys; tRNA Cys
D RO1_T_43440 RO1_T_43440 K14222 tRNA-Cys; tRNA Cys
D RO1_T_43490 RO1_T_43490 K14223 tRNA-Gln; tRNA Gln
D RO1_T_43640 RO1_T_43640 K14223 tRNA-Gln; tRNA Gln
D RO1_T_43420 RO1_T_43420 K14224 tRNA-Glu; tRNA Glu
D RO1_T_43990 RO1_T_43990 K14224 tRNA-Glu; tRNA Glu
D RO1_T_43530 RO1_T_43530 K14224 tRNA-Glu; tRNA Glu
D RO1_T_43610 RO1_T_43610 K14225 tRNA-Gly; tRNA Gly
D RO1_T_43710 RO1_T_43710 K14225 tRNA-Gly; tRNA Gly
D RO1_T_43950 RO1_T_43950 K14225 tRNA-Gly; tRNA Gly
D RO1_T_43960 RO1_T_43960 K14225 tRNA-Gly; tRNA Gly
D RO1_T_43940 RO1_T_43940 K14225 tRNA-Gly; tRNA Gly
D RO1_T_43920 RO1_T_43920 K14225 tRNA-Gly; tRNA Gly
D RO1_T_43630 RO1_T_43630 K14226 tRNA-His; tRNA His
D RO1_T_43510 RO1_T_43510 K14228 tRNA-Leu; tRNA Leu
D RO1_T_43580 RO1_T_43580 K14228 tRNA-Leu; tRNA Leu
D RO1_T_44020 RO1_T_44020 K14228 tRNA-Leu; tRNA Leu
D RO1_T_43790 RO1_T_43790 K14228 tRNA-Leu; tRNA Leu
D RO1_T_43660 RO1_T_43660 K14228 tRNA-Leu; tRNA Leu
D RO1_T_43820 RO1_T_43820 K14228 tRNA-Leu; tRNA Leu
D RO1_T_43830 RO1_T_43830 K14228 tRNA-Leu; tRNA Leu
D RO1_T_43730 RO1_T_43730 K14229 tRNA-Lys; tRNA Lys
D RO1_T_43750 RO1_T_43750 K14229 tRNA-Lys; tRNA Lys
D RO1_T_43650 RO1_T_43650 K14229 tRNA-Lys; tRNA Lys
D RO1_T_43900 RO1_T_43900 K14229 tRNA-Lys; tRNA Lys
D RO1_T_43770 RO1_T_43770 K14230 tRNA-Met; tRNA Met
D RO1_T_43550 RO1_T_43550 K14230 tRNA-Met; tRNA Met
D RO1_T_43680 RO1_T_43680 K14230 tRNA-Met; tRNA Met
D RO1_T_43760 RO1_T_43760 K14230 tRNA-Met; tRNA Met
D RO1_T_43880 RO1_T_43880 K14230 tRNA-Met; tRNA Met
D RO1_T_43700 RO1_T_43700 K14231 tRNA-Phe; tRNA Phe
D RO1_T_43890 RO1_T_43890 K14231 tRNA-Phe; tRNA Phe
D RO1_T_43450 RO1_T_43450 K14232 tRNA-Pro; tRNA Pro
D RO1_T_43600 RO1_T_43600 K14232 tRNA-Pro; tRNA Pro
D RO1_T_44040 RO1_T_44040 K14232 tRNA-Pro; tRNA Pro
D RO1_T_43930 RO1_T_43930 K14233 tRNA-Ser; tRNA Ser
D RO1_T_43970 RO1_T_43970 K14233 tRNA-Ser; tRNA Ser
D RO1_T_43800 RO1_T_43800 K14233 tRNA-Ser; tRNA Ser
D RO1_T_43810 RO1_T_43810 K14233 tRNA-Ser; tRNA Ser
D RO1_T_43540 RO1_T_43540 K14234 tRNA-Thr; tRNA Thr
D RO1_T_43860 RO1_T_43860 K14234 tRNA-Thr; tRNA Thr
D RO1_T_43480 RO1_T_43480 K14234 tRNA-Thr; tRNA Thr
D RO1_T_43690 RO1_T_43690 K14234 tRNA-Thr; tRNA Thr
D RO1_T_43500 RO1_T_43500 K14235 tRNA-Trp; tRNA Trp
D RO1_T_43780 RO1_T_43780 K14236 tRNA-Tyr; tRNA Tyr
D RO1_T_43870 RO1_T_43870 K14236 tRNA-Tyr; tRNA Tyr
D RO1_T_43570 RO1_T_43570 K14237 tRNA-Val; tRNA Val
D RO1_T_44010 RO1_T_44010 K14237 tRNA-Val; tRNA Val
D RO1_T_43670 RO1_T_43670 K14237 tRNA-Val; tRNA Val
D RO1_T_43850 RO1_T_43850 K14237 tRNA-Val; tRNA Val
D RO1_09160 glutamyl-tRNA synthetase, bacterial family K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D RO1_39010 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D RO1_39020 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D RO1_06210 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D RO1_38570 Predicted metal-dependent hydrolases related to alanyl-tRNA synthetase HxxxH domain K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D RO1_21980 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RO1_38980 aspartyl-tRNA synthetase, archaeal type K09759 aspC; nondiscriminating aspartyl-tRNA synthetase [EC:6.1.1.23]
D RO1_03970 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D RO1_05390 glycyl-tRNA synthetase, dimeric type K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D RO1_31770 threonyl-tRNA synthetase/Ser-tRNA(Thr) hydrolase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D RO1_17450 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D RO1_22450 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D RO1_00860 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D RO1_39390 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D RO1_03050 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D RO1_13160 leucyl-tRNA synthetase, eubacterial and mitochondrial family K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RO1_03810 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D RO1_32990 Lysyl-tRNA synthetase (class II) K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D RO1_11980 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RO1_08230 prolyl-tRNA synthetase, family II K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D RO1_36950 prolyl-tRNA synthetase, family I K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D RO1_21970 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D RO1_15240 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D RO1_15230 phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D RO1_00380 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RO1_23300 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:rix03060]
D RO1_02110 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY
D RO1_20180 protein translocase subunit secE/sec61 gamma K03073 secE; preprotein translocase subunit SecE
D RO1_04040 protein translocase subunit secF/protein translocase subunit secD K12257 secDF; SecD/SecF fusion protein
D RO1_05190 protein translocase subunit yajC K03210 yajC; preprotein translocase subunit YajC
D RO1_24410 membrane protein insertase, YidC/Oxa1 family, C-terminal domain K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RO1_34460 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RO1_22820 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D RO1_44100 Bacterial signal recognition particle RNA K01983 ffs; SRP RNA
D RO1_22780 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D RO1_42320 signal peptidase I . Serine peptidase. MEROPS family S26A K03100 lepB; signal peptidase I [EC:3.4.21.89]
D RO1_23340 signal peptidase I, bacterial type K03100 lepB; signal peptidase I [EC:3.4.21.89]
D RO1_23320 signal peptidase I, bacterial type K03100 lepB; signal peptidase I [EC:3.4.21.89]
D RO1_21500 Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D RO1_14420 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D RO1_11880 hypothetical protein K13280 SEC11; signal peptidase I [EC:3.4.21.89]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:rix04122]
D RO1_42280 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RO1_07430 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RO1_22380 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D RO1_42580 molybdenum cofactor biosynthesis protein A, bacterial K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D RO1_42500 GTP cyclohydrolase subunit MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D RO1_42510 molybdopterin adenylyltransferase K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D RO1_23050 thiazole biosynthesis/tRNA modification protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D RO1_12640 sulfur carrier protein ThiS K03154 thiS; sulfur carrier protein
D RO1_41730 thiamine biosynthesis protein ThiS K03154 thiS; sulfur carrier protein
D RO1_41750 Predicted metal-dependent protease of the PAD1/JAB1 superfamily K21140 mec; [CysO sulfur-carrier protein]-S-L-cysteine hydrolase [EC:3.13.1.6]
C 03050 Proteasome
C 03018 RNA degradation [PATH:rix03018]
D RO1_36490 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RO1_27160 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RO1_10220 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D RO1_27190 RNAse R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D RO1_01000 Superfamily II DNA and RNA helicases K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D RO1_05970 ATP-dependent DNA helicase, RecQ family K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D RO1_06150 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D RO1_23110 conserved hypothetical protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D RO1_25700 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D RO1_05450 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D RO1_09010 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RO1_09930 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:rix03030]
D RO1_01330 exonuclease, DNA polymerase III, epsilon subunit family K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RO1_37390 exonuclease, DNA polymerase III, epsilon subunit family K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RO1_25690 DNA polymerase III catalytic subunit, DnaE type K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RO1_09870 exonuclease, DNA polymerase III, epsilon subunit family K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D RO1_09880 DNA polymerase III, alpha subunit (gram-positive type) K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D RO1_01230 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RO1_30810 DNA polymerase III, gamma/tau subunits K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RO1_24450 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RO1_31330 primary replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D RO1_39250 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D RO1_31160 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D RO1_33540 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D RO1_22570 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RO1_12360 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:rix03410]
D RO1_14830 Predicted EndoIII-related endonuclease K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D RO1_22360 Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D RO1_21310 A/G-specific DNA glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D RO1_12730 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D RO1_05580 Endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D RO1_22570 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RO1_17890 exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D RO1_12360 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:rix03420]
D RO1_39900 Excinuclease ATPase subunit K03701 uvrA; excinuclease ABC subunit A
D RO1_34490 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D RO1_34480 excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B
D RO1_24950 excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C
D RO1_09170 Superfamily I DNA and RNA helicases K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RO1_26600 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RO1_06010 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RO1_22570 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RO1_12360 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D RO1_27320 DEAD_2. K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
C 03430 Mismatch repair [PATH:rix03430]
D RO1_14660 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D RO1_01930 Mismatch repair ATPase (MutS family) K07456 mutS2; DNA mismatch repair protein MutS2
D RO1_14640 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D RO1_09170 Superfamily I DNA and RNA helicases K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RO1_26600 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RO1_06010 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RO1_12430 exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D RO1_12440 Exonuclease VII small subunit. K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D RO1_17890 exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D RO1_31160 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D RO1_33540 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D RO1_25690 DNA polymerase III catalytic subunit, DnaE type K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RO1_09870 exonuclease, DNA polymerase III, epsilon subunit family K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D RO1_09880 DNA polymerase III, alpha subunit (gram-positive type) K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D RO1_24450 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RO1_01230 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RO1_30810 DNA polymerase III, gamma/tau subunits K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RO1_01330 exonuclease, DNA polymerase III, epsilon subunit family K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RO1_37390 exonuclease, DNA polymerase III, epsilon subunit family K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RO1_12360 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:rix03440]
D RO1_17890 exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D RO1_31160 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D RO1_33540 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D RO1_24470 recF protein K03629 recF; DNA replication and repair protein RecF
D RO1_01540 recombination protein RecR K06187 recR; recombination protein RecR
D RO1_12150 protein RecA K03553 recA; recombination protein RecA
D RO1_22570 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RO1_13360 Holliday junction DNA helicase subunit RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D RO1_13370 Holliday junction DNA helicase, RuvB subunit K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D RO1_13720 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D RO1_14150 hypothetical protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D RO1_37590 Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D RO1_37790 hypothetical protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D RO1_34580 helicase, putative, RecD/TraA family K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D RO1_25690 DNA polymerase III catalytic subunit, DnaE type K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RO1_09870 exonuclease, DNA polymerase III, epsilon subunit family K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D RO1_09880 DNA polymerase III, alpha subunit (gram-positive type) K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D RO1_24450 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RO1_01230 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RO1_30810 DNA polymerase III, gamma/tau subunits K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RO1_01330 exonuclease, DNA polymerase III, epsilon subunit family K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RO1_37390 exonuclease, DNA polymerase III, epsilon subunit family K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03272 Virion - Hepatitis viruses
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:rix02010]
D RO1_37140 sulfate/thiosulfate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D RO1_37150 sulfate ABC transporter, permease protein CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D RO1_37160 sulfate ABC transporter, permease protein CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D RO1_37170 sulfate ABC transporter, ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D RO1_42610 molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D RO1_42620 molybdate ABC transporter, permease protein K02018 modB; molybdate transport system permease protein
D RO1_42630 ABC-type sulfate/molybdate transport systems, ATPase component K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D RO1_18850 ABC-type Fe3+ transport system, periplasmic component K02012 afuA; iron(III) transport system substrate-binding protein
D RO1_18870 ABC-type Fe3+ transport system, permease component K02011 afuB; iron(III) transport system permease protein
D RO1_18860 ABC-type spermidine/putrescine transport systems, ATPase components K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D RO1_12560 Spermidine/putrescine-binding periplasmic protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D RO1_12570 ABC-type spermidine/putrescine transport system, permease component II K11070 potC; spermidine/putrescine transport system permease protein
D RO1_12580 ABC-type spermidine/putrescine transport system, permease component I K11071 potB; spermidine/putrescine transport system permease protein
D RO1_12590 spermidine/putrescine ABC transporter ATP-binding subunit K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D RO1_23520 carbohydrate ABC transporter ATP-binding protein, CUT1 family (TC 3.A.1.1.-) K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D RO1_09140 carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-) K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D RO1_06370 hypothetical protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D RO1_26420 Maltose-binding periplasmic proteins/domains K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D RO1_26430 carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-) K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D RO1_26440 carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-) K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D RO1_25120 carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-) K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D RO1_18050 carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-) K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D RO1_18060 carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-) K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D RO1_18070 carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-) K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D RO1_13230 carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-) K10188 lacE; lactose/L-arabinose transport system substrate-binding protein
D RO1_13240 carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-) K10189 lacF; lactose/L-arabinose transport system permease protein
D RO1_13250 carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-) K10190 lacG; lactose/L-arabinose transport system permease protein
D RO1_13570 ABC-type sugar transport system, periplasmic component K17318 lplA; putative aldouronate transport system substrate-binding protein
D RO1_41350 carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-) K17318 lplA; putative aldouronate transport system substrate-binding protein
D RO1_12840 ABC-type sugar transport system, periplasmic component K17318 lplA; putative aldouronate transport system substrate-binding protein
D RO1_26330 carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-) K17318 lplA; putative aldouronate transport system substrate-binding protein
D RO1_12780 carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-) K17318 lplA; putative aldouronate transport system substrate-binding protein
D RO1_19030 ABC-type sugar transport system, periplasmic component K17318 lplA; putative aldouronate transport system substrate-binding protein
D RO1_30020 hypothetical protein K17318 lplA; putative aldouronate transport system substrate-binding protein
D RO1_22080 ABC-type sugar transport system, periplasmic component K17318 lplA; putative aldouronate transport system substrate-binding protein
D RO1_13590 ABC-type polysaccharide transport system, permease component K17319 lplB; putative aldouronate transport system permease protein
D RO1_19050 ABC-type polysaccharide transport system, permease component K17319 lplB; putative aldouronate transport system permease protein
D RO1_41330 carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-) K17319 lplB; putative aldouronate transport system permease protein
D RO1_26340 carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-) K17319 lplB; putative aldouronate transport system permease protein
D RO1_12760 carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-) K17319 lplB; putative aldouronate transport system permease protein
D RO1_30000 carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-) K17319 lplB; putative aldouronate transport system permease protein
D RO1_26350 carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-) K17320 lplC; putative aldouronate transport system permease protein
D RO1_13600 carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-) K17320 lplC; putative aldouronate transport system permease protein
D RO1_41340 carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-) K17320 lplC; putative aldouronate transport system permease protein
D RO1_22060 ABC-type sugar transport system, permease component K17320 lplC; putative aldouronate transport system permease protein
D RO1_12770 carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-) K17320 lplC; putative aldouronate transport system permease protein
D RO1_30010 carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-) K17320 lplC; putative aldouronate transport system permease protein
D RO1_02990 carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-) K10240 cebE; cellobiose transport system substrate-binding protein
D RO1_08820 carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-) K10240 cebE; cellobiose transport system substrate-binding protein
D RO1_08840 carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-) K10241 cebF; cellobiose transport system permease protein
D RO1_08850 carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-) K10242 cebG; cellobiose transport system permease protein
D RO1_38310 carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-) K17234 araN; arabinooligosaccharide transport system substrate-binding protein
D RO1_38320 carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-) K17235 araP; arabinooligosaccharide transport system permease protein
D RO1_38330 carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-) K17236 araQ; arabinooligosaccharide transport system permease protein
D RO1_11230 nucleoside-binding protein K07335 bmpA; basic membrane protein A and related proteins
D RO1_23190 nucleoside-binding protein K07335 bmpA; basic membrane protein A and related proteins
D RO1_23210 nucleoside ABC transporter membrane protein K23535 nupB; general nucleoside transport system permease protein
D RO1_23220 nucleoside ABC transporter membrane protein K23536 nupC; general nucleoside transport system permease protein
D RO1_03480 hypothetical protein K10439 rbsB; ribose transport system substrate-binding protein
D RO1_03470 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components K10440 rbsC; ribose transport system permease protein
D RO1_03460 ABC-type sugar transport system, ATPase component K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D RO1_23670 monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-) K23508 ytfQ; galactofuranose transport system substrate-binding protein
D RO1_23720 monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-) K23508 ytfQ; galactofuranose transport system substrate-binding protein
D RO1_23710 monosaccharide ABC transporter membrane protein, CUT2 family (TC 3.A.1.2.-) K23509 ytfT; galactofuranose transport system permease protein
D RO1_23700 monosaccharide ABC transporter membrane protein, CUT2 family (TC 3.A.1.2.-) K23509 ytfT; galactofuranose transport system permease protein
D RO1_23680 monosaccharide ABC transporter ATP-binding protein, CUT2 family (TC 3.A.1.2.-) K10820 ytfR; galactofuranose transport system ATP-binding protein [EC:7.5.2.9]
D RO1_17740 monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-) K10540 mglB; methyl-galactoside transport system substrate-binding protein
D RO1_17820 monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-) K10540 mglB; methyl-galactoside transport system substrate-binding protein
D RO1_17760 monosaccharide ABC transporter membrane protein, CUT2 family (TC 3.A.1.2.-) K10541 mglC; methyl-galactoside transport system permease protein
D RO1_17750 monosaccharide ABC transporter ATP-binding protein, CUT2 family (TC 3.A.1.2.-) K10542 mglA; methyl-galactoside transport system ATP-binding protein [EC:7.5.2.11]
D RO1_00600 phosphate ABC transporter substrate-binding protein, PhoT family (TC 3.A.1.7.1) K02040 pstS; phosphate transport system substrate-binding protein
D RO1_33510 hypothetical protein K02040 pstS; phosphate transport system substrate-binding protein
D RO1_00610 phosphate ABC transporter membrane protein 1, PhoT family (TC 3.A.1.7.1) K02037 pstC; phosphate transport system permease protein
D RO1_00620 phosphate ABC transporter membrane protein 2, PhoT family (TC 3.A.1.7.1) K02038 pstA; phosphate transport system permease protein
D RO1_00630 phosphate ABC transporter ATP-binding protein, PhoT family (TC 3.A.1.7.1) K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D RO1_31720 phosphate/phosphite/phosphonate ABC transporters, periplasmic binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D RO1_31740 phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein
D RO1_31750 phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein
D RO1_31730 phosphonate ABC transporter, ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D RO1_41160 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain K02424 tcyA; L-cystine transport system substrate-binding protein
D RO1_41130 ABC-type polar amino acid transport system, ATPase component K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D RO1_22990 amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family K17077 artQ; arginine/lysine/histidine transport system permease protein
D RO1_23000 amino acid ABC transporter ATP-binding protein, PAAT family (TC 3.A.1.3.-) K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D RO1_20500 amino acid/amide ABC transporter substrate-binding protein, HAAT family (TC 3.A.1.4.-) K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RO1_20510 amino acid/amide ABC transporter membrane protein 1, HAAT family (TC 3.A.1.4.-) K01997 livH; branched-chain amino acid transport system permease protein
D RO1_20520 amino acid/amide ABC transporter membrane protein 2, HAAT family (TC 3.A.1.4.-) K01998 livM; branched-chain amino acid transport system permease protein
D RO1_20530 amino acid/amide ABC transporter ATP-binding protein 1, HAAT family (TC 3.A.1.4.-) K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RO1_20540 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family (TC 3.A.1.4.-) K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RO1_34230 ABC-type metal ion transport system, periplasmic component/surface antigen K02073 metQ; D-methionine transport system substrate-binding protein
D RO1_34220 ABC-type metal ion transport system, permease component K02072 metI; D-methionine transport system permease protein
D RO1_34210 ABC-type metal ion transport system, ATPase component K02071 metN; D-methionine transport system ATP-binding protein
D RO1_19210 ABC-type oligopeptide transport system, periplasmic component K15580 oppA; oligopeptide transport system substrate-binding protein
D RO1_19230 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K15582 oppC; oligopeptide transport system permease protein
D RO1_19240 oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain K15583 oppD; oligopeptide transport system ATP-binding protein
D RO1_19250 ATPase components of various ABC-type transport systems, contain duplicated ATPase K10823 oppF; oligopeptide transport system ATP-binding protein
D RO1_20350 ABC-type Co2+ transport system, permease component K02007 cbiM; cobalt/nickel transport system permease protein
D RO1_20360 cobalt ABC transporter, permease protein CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein
D RO1_20370 ABC-type cobalt transport system, ATPase component K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D RO1_10780 Uncharacterized conserved protein K03523 bioY; biotin transport system substrate-specific component
D RO1_00450 Uncharacterized conserved protein K03523 bioY; biotin transport system substrate-specific component
D RO1_37510 ABC-type cobalt transport system, permease component CbiQ and related transporters K16785 ecfT; energy-coupling factor transport system permease protein
D RO1_37480 ABC-type cobalt transport system, ATPase component K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D RO1_37500 ABC-type cobalt transport system, ATPase component K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D RO1_35100 ABC-type polysaccharide/polyol phosphate export systems, permease component K09690 wzm; homopolymeric O-antigen transport system permease protein
D RO1_35380 ABC-type polysaccharide/polyol phosphate export systems, permease component K09690 wzm; homopolymeric O-antigen transport system permease protein
D RO1_35400 ABC-type polysaccharide/polyol phosphate transport system, ATPase component K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D RO1_35110 ABC-type polysaccharide/polyol phosphate transport system, ATPase component K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D RO1_34780 ABC-type polysaccharide/polyol phosphate export systems, permease component K09692 tagG; teichoic acid transport system permease protein
D RO1_34790 ABC-type polysaccharide/polyol phosphate transport system, ATPase component K09693 tagH; teichoic acid transport system ATP-binding protein [EC:7.5.2.4]
D RO1_21360 ABC-2 type transporter. K09696 natB; sodium transport system permease protein
D RO1_21350 ABC-type multidrug transport system, ATPase component K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D RO1_37840 Uncharacterized protein conserved in bacteria K20460 nukE; lantibiotic transport system permease protein
D RO1_37850 Uncharacterized protein conserved in bacteria K20461 nukG; lantibiotic transport system permease protein
D RO1_37830 ABC-type multidrug transport system, ATPase component K20459 nukF; lantibiotic transport system ATP-binding protein
D RO1_33970 hypothetical protein K20491 nisE; lantibiotic transport system permease protein
D RO1_33980 hypothetical protein K20492 nisG; lantibiotic transport system permease protein
D RO1_33960 ABC-type multidrug transport system, ATPase component K20490 nisF; lantibiotic transport system ATP-binding protein
D RO1_32240 Predicted permease. K19084 braE; bacitracin transport system permease protein
D RO1_32220 ABC-type antimicrobial peptide transport system, ATPase component K19083 braD; bacitracin transport system ATP-binding protein
D RO1_16350 cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D RO1_16340 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D RO1_23430 hypothetical protein K16919 ytrC_D; acetoin utilization transport system permease protein
D RO1_23420 ABC-type multidrug transport system, ATPase component K16921 ytrB; acetoin utilization transport system ATP-binding protein
D RO1_03640 ABC-type multidrug transport system, ATPase and permease components K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D RO1_08060 ABC-type multidrug transport system, ATPase and permease components K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D RO1_10310 ABC-type multidrug transport system, ATPase and permease components K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D RO1_02840 ABC-type multidrug transport system, ATPase and permease components K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D RO1_08070 ABC-type multidrug transport system, ATPase and permease components K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D RO1_10320 ABC-type multidrug transport system, ATPase and permease components K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D RO1_12280 ABC-type multidrug transport system, ATPase and permease components K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D RO1_39050 ABC-type multidrug transport system, ATPase and permease components K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D RO1_18980 ABC-type multidrug transport system, ATPase and permease components K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D RO1_26960 ABC-type multidrug transport system, ATPase and permease components K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D RO1_26980 ABC-type multidrug transport system, ATPase and permease components K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D RO1_39040 ABC-type multidrug transport system, ATPase and permease components K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D RO1_18990 ABC-type multidrug transport system, ATPase and permease components K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D RO1_12290 ABC-type multidrug transport system, ATPase and permease components K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
C 02060 Phosphotransferase system (PTS) [PATH:rix02060]
D RO1_31650 phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D RO1_07550 Phosphotransferase System HPr (HPr) Family K02784 ptsH; phosphocarrier protein HPr
D RO1_31640 Phosphotransferase System HPr (HPr) Family K02784 ptsH; phosphocarrier protein HPr
D RO1_34700 Phosphotransferase System HPr (HPr) Family K02784 ptsH; phosphocarrier protein HPr
D RO1_36660 Phosphotransferase System HPr (HPr) Family K02784 ptsH; phosphocarrier protein HPr
D RO1_07600 PTS system, glucose-like IIB component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D RO1_31630 PTS system D-fructose-specific IIA component (F1P-forming), Frc family (TC 4.A.2.1.4)/PTS system D-fructose-specific IIB component (F1P-forming), Frc family (TC 4.A.2.1.4)/PTS system D-fructose-specific IIC component (F1P-forming), Frc family (TC 4.A.2.1.4) K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D RO1_31620 fructose-1-phosphate kinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
C 03070 Bacterial secretion system [PATH:rix03070]
D RO1_04040 protein translocase subunit secF/protein translocase subunit secD K12257 secDF; SecD/SecF fusion protein
D RO1_20180 protein translocase subunit secE/sec61 gamma K03073 secE; preprotein translocase subunit SecE
D RO1_02110 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY
D RO1_05190 protein translocase subunit yajC K03210 yajC; preprotein translocase subunit YajC
D RO1_24410 membrane protein insertase, YidC/Oxa1 family, C-terminal domain K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RO1_34460 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RO1_22780 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D RO1_22820 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D RO1_18350 Type IV secretory pathway, VirD4 components K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D RO1_42990 Type IV secretory pathway, VirD4 components K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D RO1_16010 Type IV secretory pathway, VirD4 components K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:rix02020]
D RO1_00670 Signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D RO1_00660 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D RO1_00600 phosphate ABC transporter substrate-binding protein, PhoT family (TC 3.A.1.7.1) K02040 pstS; phosphate transport system substrate-binding protein
D RO1_33510 hypothetical protein K02040 pstS; phosphate transport system substrate-binding protein
D RO1_21080 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain K04771 degP; serine protease Do [EC:3.4.21.107]
D RO1_01920 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain K04771 degP; serine protease Do [EC:3.4.21.107]
D RO1_31980 Flagellin and related hook-associated proteins K02406 fliC; flagellin
D RO1_19740 Flagellin and related hook-associated proteins K02406 fliC; flagellin
D RO1_01280 Flagellin and related hook-associated proteins K02406 fliC; flagellin
D RO1_09660 RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG K02405 fliA; RNA polymerase sigma factor FliA
D RO1_09440 Flagellar motor component K02556 motA; chemotaxis protein MotA
D RO1_15340 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07775 resD; two-component system, OmpR family, response regulator ResD
D RO1_18770 Signal transduction histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D RO1_24440 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D RO1_32240 Predicted permease. K19084 braE; bacitracin transport system permease protein
D RO1_32220 ABC-type antimicrobial peptide transport system, ATPase component K19083 braD; bacitracin transport system ATP-binding protein
D RO1_32210 Signal transduction histidine kinase K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3]
D RO1_22280 His Kinase A (phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./HAMP domain. K18345 vanSB; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D RO1_28780 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K18349 vanRC; two-component system, OmpR family, response regulator VanR
D RO1_43140 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D RO1_29680 His Kinase A (phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./HAMP domain. K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D RO1_33960 ABC-type multidrug transport system, ATPase component K20490 nisF; lantibiotic transport system ATP-binding protein
D RO1_33970 hypothetical protein K20491 nisE; lantibiotic transport system permease protein
D RO1_33980 hypothetical protein K20492 nisG; lantibiotic transport system permease protein
D RO1_12530 sporulation transcription factor Spo0A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A
D RO1_23780 Malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D RO1_21350 ABC-type multidrug transport system, ATPase component K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D RO1_21360 ABC-2 type transporter. K09696 natB; sodium transport system permease protein
D RO1_15760 Accessory gene regulator B. K07813 agrB; accessory gene regulator B
D RO1_25340 Accessory gene regulator B. K07813 agrB; accessory gene regulator B
D RO1_06580 Membrane protein putatively involved in post-translational modification of the autoinducing quorum-sensing peptide K07813 agrB; accessory gene regulator B
D RO1_19670 carbon storage regulator (csrA) K03563 csrA; carbon storage regulator
D RO1_01270 Global regulator protein family. K03563 csrA; carbon storage regulator
D RO1_24350 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./Histidine kinase. K07777 degS; two-component system, NarL family, sensor histidine kinase DegS [EC:2.7.13.3]
D RO1_32040 Flp pilus assembly protein, ATPase CpaF K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D RO1_32430 Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D RO1_04730 Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D RO1_32050 hypothetical protein K12510 tadB; tight adherence protein B
D RO1_32060 Bacterial type II secretion system protein F domain. K12511 tadC; tight adherence protein C
D RO1_24840 nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1
D RO1_05130 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RO1_24860 Uncharacterized protein related to glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RO1_15540 Methylase of chemotaxis methyl-accepting proteins K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D RO1_00110 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RO1_09970 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RO1_19270 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RO1_19330 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RO1_10970 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RO1_11240 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RO1_20390 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RO1_31110 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RO1_41250 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RO1_00930 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RO1_31780 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RO1_02440 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RO1_34060 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RO1_15410 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RO1_05680 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RO1_17350 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RO1_27010 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RO1_37240 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RO1_17900 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RO1_37930 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RO1_09620 Chemotaxis signal transduction protein K03408 cheW; purine-binding chemotaxis protein CheW
D RO1_09960 Chemotaxis signal transduction protein K03408 cheW; purine-binding chemotaxis protein CheW
D RO1_09610 Chemotaxis protein histidine kinase and related kinases K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RO1_09490 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RO1_15370 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RO1_09600 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RO1_22300 Chemotaxis signal transduction protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D RO1_22160 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./Histidine kinase./HAMP domain. K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D RO1_12830 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./Histidine kinase./HAMP domain. K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D RO1_08630 Predicted signal transduction protein with a C-terminal ATPase domain K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D RO1_23660 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./Histidine kinase./HAMP domain. K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D RO1_26310 Predicted signal transduction protein with a C-terminal ATPase domain K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D RO1_17790 Predicted signal transduction protein with a C-terminal ATPase domain K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D RO1_22170 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain K07720 yesN; two-component system, response regulator YesN
D RO1_08640 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain K07720 yesN; two-component system, response regulator YesN
D RO1_19070 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain K07720 yesN; two-component system, response regulator YesN
D RO1_10330 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain K07720 yesN; two-component system, response regulator YesN
D RO1_23650 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain K07720 yesN; two-component system, response regulator YesN
D RO1_26320 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain K07720 yesN; two-component system, response regulator YesN
D RO1_17780 two component transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN
D RO1_21490 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain K07720 yesN; two-component system, response regulator YesN
D RO1_13560 AraC-type DNA-binding domain-containing proteins K07720 yesN; two-component system, response regulator YesN
D RO1_08180 two component transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN
D RO1_38920 Protein-tyrosine-phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D RO1_02500 Pectin methylesterase K01051 E3.1.1.11; pectinesterase [EC:3.1.1.11]
D RO1_39790 Endoglucanase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D RO1_41240 Signal transduction histidine kinase K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3]
D RO1_19610 Anti-sigma-28 factor, FlgM. K02398 flgM; negative regulator of flagellin synthesis FlgM
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:rix02024]
D RO1_22970 LuxS protein involved in autoinducer AI2 synthesis K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D RO1_10690 anthranilate synthase, component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D RO1_10700 anthranilate synthase, component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D RO1_32190 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D RO1_12250 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D RO1_20500 amino acid/amide ABC transporter substrate-binding protein, HAAT family (TC 3.A.1.4.-) K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RO1_20510 amino acid/amide ABC transporter membrane protein 1, HAAT family (TC 3.A.1.4.-) K01997 livH; branched-chain amino acid transport system permease protein
D RO1_20520 amino acid/amide ABC transporter membrane protein 2, HAAT family (TC 3.A.1.4.-) K01998 livM; branched-chain amino acid transport system permease protein
D RO1_20530 amino acid/amide ABC transporter ATP-binding protein 1, HAAT family (TC 3.A.1.4.-) K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RO1_20540 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family (TC 3.A.1.4.-) K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RO1_41120 Beta-mannanase K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78]
D RO1_42380 diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D RO1_15760 Accessory gene regulator B. K07813 agrB; accessory gene regulator B
D RO1_25340 Accessory gene regulator B. K07813 agrB; accessory gene regulator B
D RO1_06580 Membrane protein putatively involved in post-translational modification of the autoinducing quorum-sensing peptide K07813 agrB; accessory gene regulator B
D RO1_19210 ABC-type oligopeptide transport system, periplasmic component K15580 oppA; oligopeptide transport system substrate-binding protein
D RO1_19230 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K15582 oppC; oligopeptide transport system permease protein
D RO1_19240 oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain K15583 oppD; oligopeptide transport system ATP-binding protein
D RO1_19250 ATPase components of various ABC-type transport systems, contain duplicated ATPase K10823 oppF; oligopeptide transport system ATP-binding protein
D RO1_20430 Bacterial extracellular solute-binding proteins, family 5 Middle. K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RO1_06250 ABC-type dipeptide transport system, periplasmic component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RO1_20440 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RO1_06280 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RO1_20450 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RO1_06290 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RO1_20460 oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RO1_06260 oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RO1_06270 oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain K02032 ddpF; peptide/nickel transport system ATP-binding protein
D RO1_24410 membrane protein insertase, YidC/Oxa1 family, C-terminal domain K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RO1_04040 protein translocase subunit secF/protein translocase subunit secD K12257 secDF; SecD/SecF fusion protein
D RO1_20180 protein translocase subunit secE/sec61 gamma K03073 secE; preprotein translocase subunit SecE
D RO1_02110 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY
D RO1_05190 protein translocase subunit yajC K03210 yajC; preprotein translocase subunit YajC
D RO1_34460 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RO1_22780 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D RO1_22820 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D RO1_12530 sporulation transcription factor Spo0A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A
D RO1_25180 Tetratricopeptide repeat./Helix-turn-helix. K20480 nprR; HTH-type transcriptional regulator, quorum sensing regulator NprR
D RO1_29680 His Kinase A (phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./HAMP domain. K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D RO1_33960 ABC-type multidrug transport system, ATPase component K20490 nisF; lantibiotic transport system ATP-binding protein
D RO1_33970 hypothetical protein K20491 nisE; lantibiotic transport system permease protein
D RO1_33980 hypothetical protein K20492 nisG; lantibiotic transport system permease protein
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:rix02030]
D RO1_00110 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RO1_09970 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RO1_19270 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RO1_19330 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RO1_10970 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RO1_11240 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RO1_20390 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RO1_31110 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RO1_41250 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RO1_00930 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RO1_31780 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RO1_02440 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RO1_34060 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RO1_15410 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RO1_05680 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RO1_17350 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RO1_27010 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RO1_37240 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RO1_17900 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RO1_37930 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RO1_03480 hypothetical protein K10439 rbsB; ribose transport system substrate-binding protein
D RO1_17740 monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-) K10540 mglB; methyl-galactoside transport system substrate-binding protein
D RO1_17820 monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-) K10540 mglB; methyl-galactoside transport system substrate-binding protein
D RO1_09610 Chemotaxis protein histidine kinase and related kinases K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RO1_09620 Chemotaxis signal transduction protein K03408 cheW; purine-binding chemotaxis protein CheW
D RO1_09960 Chemotaxis signal transduction protein K03408 cheW; purine-binding chemotaxis protein CheW
D RO1_09490 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RO1_15370 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RO1_09630 Chemotaxis protein CheC, inhibitor of MCP methylation K03410 cheC; chemotaxis protein CheC
D RO1_09600 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RO1_22300 Chemotaxis signal transduction protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D RO1_09640 Chemotaxis protein; stimulates methylation of MCP proteins K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D RO1_15540 Methylase of chemotaxis methyl-accepting proteins K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D RO1_09340 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D RO1_09470 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D RO1_09480 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D RO1_09440 Flagellar motor component K02556 motA; chemotaxis protein MotA
C 02040 Flagellar assembly [PATH:rix02040]
D RO1_09320 flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D RO1_09330 flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) K02409 fliF; flagellar M-ring protein FliF
D RO1_09340 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D RO1_09360 type III secretion system ATPase, FliI/YscN K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D RO1_09370 flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ
D RO1_09390 Flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK
D RO1_09470 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D RO1_09480 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D RO1_09500 Flagellar biosynthesis protein, FliO. K02418 fliO; flagellar protein FliO/FliZ
D RO1_09510 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D RO1_09520 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D RO1_09550 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D RO1_09300 flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D RO1_09310 flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D RO1_09400 Flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D RO1_09420 fagellar hook-basal body proteins K02390 flgE; flagellar hook protein FlgE
D RO1_34550 fagellar hook-basal body proteins K02391 flgF; flagellar basal-body rod protein FlgF
D RO1_34560 fagellar hook-basal body proteins K02392 flgG; flagellar basal-body rod protein FlgG
D RO1_34570 hypothetical protein K02395 flgJ; peptidoglycan hydrolase FlgJ
D RO1_19630 flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D RO1_19640 flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D RO1_19650 flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL
D RO1_31980 Flagellin and related hook-associated proteins K02406 fliC; flagellin
D RO1_19740 Flagellin and related hook-associated proteins K02406 fliC; flagellin
D RO1_01280 Flagellin and related hook-associated proteins K02406 fliC; flagellin
D RO1_19690 Flagellar capping protein K02407 fliD; flagellar hook-associated protein 2
D RO1_20160 hypothetical protein K02407 fliD; flagellar hook-associated protein 2
D RO1_19700 flagellar biosynthetic protein FliS K02422 fliS; flagellar secretion chaperone FliS
D RO1_09440 Flagellar motor component K02556 motA; chemotaxis protein MotA
D RO1_19610 Anti-sigma-28 factor, FlgM. K02398 flgM; negative regulator of flagellin synthesis FlgM
D RO1_41160 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain K02424 tcyA; L-cystine transport system substrate-binding protein
D RO1_39260 RNA polymerase, sigma 70 subunit, RpoD K03086 rpoD; RNA polymerase primary sigma factor
D RO1_09660 RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D RO1_36490 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RO1_27160 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
D RO1_22390 methionine synthase (B12-dependent) K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:rix01501]
D RO1_17480 Beta-glucosidase-related glycosidases K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D RO1_03500 Beta-glucosidase-related glycosidases K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D RO1_19210 ABC-type oligopeptide transport system, periplasmic component K15580 oppA; oligopeptide transport system substrate-binding protein
D RO1_19230 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K15582 oppC; oligopeptide transport system permease protein
D RO1_19240 oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain K15583 oppD; oligopeptide transport system ATP-binding protein
D RO1_19250 ATPase components of various ABC-type transport systems, contain duplicated ATPase K10823 oppF; oligopeptide transport system ATP-binding protein
D RO1_20970 Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component K02172 blaR1; bla regulator protein blaR1
D RO1_20960 Predicted transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D RO1_16170 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
C 01502 Vancomycin resistance [PATH:rix01502]
D RO1_22280 His Kinase A (phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./HAMP domain. K18345 vanSB; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D RO1_28780 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K18349 vanRC; two-component system, OmpR family, response regulator VanR
D RO1_38160 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RO1_14990 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D RO1_38170 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D RO1_11510 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D RO1_32160 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D RO1_43140 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:rix01503]
D RO1_20310 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D RO1_40940 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D RO1_31910 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D RO1_24980 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D RO1_21080 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain K04771 degP; serine protease Do [EC:3.4.21.107]
D RO1_01920 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain K04771 degP; serine protease Do [EC:3.4.21.107]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:rix01000]
C 01001 Protein kinases [BR:rix01001]
D RO1_39440 Serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D RO1_31950 Protein kinase domain. K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D RO1_37540 Protein kinase domain. K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D RO1_00670 Signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D RO1_18770 Signal transduction histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D RO1_32210 Signal transduction histidine kinase K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3]
D RO1_22280 His Kinase A (phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./HAMP domain. K18345 vanSB; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D RO1_29680 His Kinase A (phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./HAMP domain. K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D RO1_24350 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./Histidine kinase. K07777 degS; two-component system, NarL family, sensor histidine kinase DegS [EC:2.7.13.3]
D RO1_09610 Chemotaxis protein histidine kinase and related kinases K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RO1_22160 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./Histidine kinase./HAMP domain. K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D RO1_12830 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./Histidine kinase./HAMP domain. K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D RO1_08630 Predicted signal transduction protein with a C-terminal ATPase domain K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D RO1_23660 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./Histidine kinase./HAMP domain. K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D RO1_26310 Predicted signal transduction protein with a C-terminal ATPase domain K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D RO1_17790 Predicted signal transduction protein with a C-terminal ATPase domain K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D RO1_41240 Signal transduction histidine kinase K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:rix01009]
D RO1_25700 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D RO1_07880 Molecular chaperone, HSP90 family K04079 HSP90A; molecular chaperone HtpG
D RO1_35670 Molecular chaperone, HSP90 family K04079 HSP90A; molecular chaperone HtpG
D RO1_39430 Serine/threonine protein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D RO1_06670 Serine/threonine protein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
C 01002 Peptidases and inhibitors [BR:rix01002]
D RO1_21500 Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D RO1_14420 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D RO1_01800 Flp pilus assembly protein, protease CpaA K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D RO1_32100 Type IV leader peptidase family. K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D RO1_43250 Flp pilus assembly protein, protease CpaA K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D RO1_32020 Type IV leader peptidase family. K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D RO1_06450 GPR endopeptidase K06012 gpr; spore protease [EC:3.4.24.78]
D RO1_26180 pyroglutamyl-peptidase I . Cysteine peptidase. MEROPS family C15 K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3]
D RO1_16840 GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit/GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D RO1_16250 Cell wall-associated hydrolases (invasion-associated proteins) K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D RO1_27290 Cell wall-associated hydrolases (invasion-associated proteins) K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D RO1_38220 Cell wall-associated hydrolases (invasion-associated proteins) K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D RO1_01660 Cell wall-associated hydrolases (invasion-associated proteins) K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D RO1_27510 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D RO1_23620 Glutamate synthase domain 2 K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D RO1_17860 glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D RO1_20900 asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D RO1_06480 asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D RO1_20650 DJ-1 family protein K03152 thiJ; protein deglycase [EC:3.5.1.124]
D RO1_19550 Penicillin V acylase and related amidases K24041 yxeI; penicillin V amidase [EC:3.5.1.11]
D RO1_33910 Penicillin V acylase and related amidases K24041 yxeI; penicillin V amidase [EC:3.5.1.11]
D RO1_18490 hypothetical protein K07284 srtA; sortase A [EC:3.4.22.70]
D RO1_28930 LPXTG-site transpeptidase (sortase) family protein K07284 srtA; sortase A [EC:3.4.22.70]
D RO1_43060 Uncharacterized protein conserved in bacteria K08600 srtB; sortase B [EC:3.4.22.71]
D RO1_34100 dipeptidase A. Cysteine peptidase. MEROPS family C69 K08659 pepDA; dipeptidase [EC:3.4.-.-]
D RO1_15760 Accessory gene regulator B. K07813 agrB; accessory gene regulator B
D RO1_25340 Accessory gene regulator B. K07813 agrB; accessory gene regulator B
D RO1_06580 Membrane protein putatively involved in post-translational modification of the autoinducing quorum-sensing peptide K07813 agrB; accessory gene regulator B
D RO1_17980 CAAX amino terminal protease family. K07052 K07052; CAAX protease family protein
D RO1_23570 Predicted metal-dependent membrane protease K07052 K07052; CAAX protease family protein
D RO1_26570 CAAX amino terminal protease family. K07052 K07052; CAAX protease family protein
D RO1_02520 CAAX amino terminal protease family. K07052 K07052; CAAX protease family protein
D RO1_13820 oligopeptidase F. Metallo peptidase. MEROPS family M03B K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D RO1_39600 Predicted carboxypeptidase K01308 yqgT; g-D-glutamyl-meso-diaminopimelate peptidase [EC:3.4.19.11]
D RO1_43140 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D RO1_05350 Predicted Zn-dependent peptidases, insulinase-like K06972 PITRM1; presequence protease [EC:3.4.24.-]
D RO1_21630 Zn-dependent dipeptidase, microsomal dipeptidase homolog K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D RO1_30700 peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D RO1_14020 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D RO1_05500 Membrane proteins related to metalloendopeptidases K21472 lytH; peptidoglycan LD-endopeptidase LytH [EC:3.4.-.-]
D RO1_14030 Membrane proteins related to metalloendopeptidases K21472 lytH; peptidoglycan LD-endopeptidase LytH [EC:3.4.-.-]
D RO1_38240 methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D RO1_22560 Xaa-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D RO1_17680 Leucyl aminopeptidase (aminopeptidase T) K19689 ampS; aminopeptidase [EC:3.4.11.-]
D RO1_03770 Zn-dependent carboxypeptidase K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19]
D RO1_33930 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D RO1_24960 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D RO1_23400 Cellulase M and related proteins K01269 yhfE; aminopeptidase [EC:3.4.11.-]
D RO1_09850 RIP metalloprotease RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D RO1_20970 Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component K02172 blaR1; bla regulator protein blaR1
D RO1_21080 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain K04771 degP; serine protease Do [EC:3.4.21.107]
D RO1_01920 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain K04771 degP; serine protease Do [EC:3.4.21.107]
D RO1_06510 Subtilisin-like serine proteases K14647 vpr; minor extracellular serine protease Vpr [EC:3.4.21.-]
D RO1_30730 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D RO1_15660 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D RO1_15700 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D RO1_14510 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D RO1_02880 ATP-dependent Clp protease, proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D RO1_14310 SOS-response transcriptional repressor, LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D RO1_42320 signal peptidase I . Serine peptidase. MEROPS family S26A K03100 lepB; signal peptidase I [EC:3.4.21.89]
D RO1_23340 signal peptidase I, bacterial type K03100 lepB; signal peptidase I [EC:3.4.21.89]
D RO1_23320 signal peptidase I, bacterial type K03100 lepB; signal peptidase I [EC:3.4.21.89]
D RO1_11880 hypothetical protein K13280 SEC11; signal peptidase I [EC:3.4.21.89]
D RO1_16380 C-terminal peptidase (prc) K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D RO1_13390 Collagenase and related proteases K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D RO1_23150 Collagenase and related proteases K08303 prtC; U32 family peptidase [EC:3.4.-.-]
C 01003 Glycosyltransferases [BR:rix01003]
D RO1_38260 Monogalactosyldiacylglycerol synthase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
D RO1_12540 glycogen/starch synthases, ADP-glucose type K00703 glgA; starch synthase [EC:2.4.1.21]
D RO1_14950 glycogen/starch synthases, ADP-glucose type K00703 glgA; starch synthase [EC:2.4.1.21]
D RO1_16170 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D RO1_41460 penicillin-binding protein, 1A family K18770 pbpD; penicillin-binding protein 4 [EC:2.4.99.28 3.4.16.4]
D RO1_20890 bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D RO1_16300 Teichoic acid biosynthesis proteins K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:rix01005]
D RO1_20700 Glycosyltransferases involved in cell wall biogenesis K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
D RO1_20710 Glycosyltransferases involved in cell wall biogenesis K12999 rgpI; glucosyltransferase [EC:2.4.1.-]
D RO1_35310 Sugar transferases involved in lipopolysaccharide synthesis K13012 wbqP; O-antigen biosynthesis protein WbqP
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:rix01011]
D RO1_36830 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D RO1_24920 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D RO1_36720 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D RO1_11520 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D RO1_39360 UDP-N-acetylmuramyl-tripeptide synthetases K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D RO1_38160 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RO1_14990 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D RO1_11510 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D RO1_32160 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D RO1_14220 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D RO1_14930 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D RO1_16170 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D RO1_41460 penicillin-binding protein, 1A family K18770 pbpD; penicillin-binding protein 4 [EC:2.4.99.28 3.4.16.4]
D RO1_11490 Cell division protein FtsI/penicillin-binding protein 2 K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein)
D RO1_11500 Cell division protein FtsI/penicillin-binding protein 2 K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein)
D RO1_13410 Cell division protein FtsI/penicillin-binding protein 2 K05364 pbpA; penicillin-binding protein A
D RO1_30730 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D RO1_15660 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D RO1_15700 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D RO1_14510 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D RO1_43140 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D RO1_16250 Cell wall-associated hydrolases (invasion-associated proteins) K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D RO1_27290 Cell wall-associated hydrolases (invasion-associated proteins) K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D RO1_38220 Cell wall-associated hydrolases (invasion-associated proteins) K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D RO1_01660 Cell wall-associated hydrolases (invasion-associated proteins) K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D RO1_05500 Membrane proteins related to metalloendopeptidases K21472 lytH; peptidoglycan LD-endopeptidase LytH [EC:3.4.-.-]
D RO1_14030 Membrane proteins related to metalloendopeptidases K21472 lytH; peptidoglycan LD-endopeptidase LytH [EC:3.4.-.-]
D RO1_18490 hypothetical protein K07284 srtA; sortase A [EC:3.4.22.70]
D RO1_28930 LPXTG-site transpeptidase (sortase) family protein K07284 srtA; sortase A [EC:3.4.22.70]
D RO1_43060 Uncharacterized protein conserved in bacteria K08600 srtB; sortase B [EC:3.4.22.71]
D RO1_23130 Predicted periplasmic solute-binding protein K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D RO1_00970 SpoIID/LytB domain K06381 spoIID; stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:4.2.2.29]
D RO1_20310 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D RO1_40940 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D RO1_31910 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D RO1_24980 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:rix01004]
D RO1_41800 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D RO1_41850 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D RO1_41820 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D RO1_02470 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RO1_41810 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RO1_41790 putative enoyl-(acyl-carrier-protein) reductase II K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D RO1_22730 phosphate:acyl-[acyl carrier protein] acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D RO1_23450 acyl-phosphate glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D RO1_38250 Predicted membrane protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D RO1_14330 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D RO1_38180 1-acyl-sn-glycerol-3-phosphate acyltransferases K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:rix01006]
D RO1_12450 Geranylgeranyl pyrophosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D RO1_09820 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D RO1_14630 tRNA isopentenyltransferase (miaA) K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D RO1_20840 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases K14136 K14136; decaprenyl-phosphate phosphoribosyltransferase [EC:2.4.2.45]
C 01007 Amino acid related enzymes [BR:rix01007]
D RO1_06210 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D RO1_09160 glutamyl-tRNA synthetase, bacterial family K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D RO1_00380 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RO1_23300 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D RO1_22450 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D RO1_11980 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RO1_00860 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D RO1_03810 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D RO1_03050 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D RO1_13160 leucyl-tRNA synthetase, eubacterial and mitochondrial family K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RO1_32990 Lysyl-tRNA synthetase (class II) K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D RO1_21980 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RO1_03970 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D RO1_38980 aspartyl-tRNA synthetase, archaeal type K09759 aspC; nondiscriminating aspartyl-tRNA synthetase [EC:6.1.1.23]
D RO1_21970 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D RO1_05390 glycyl-tRNA synthetase, dimeric type K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D RO1_17450 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D RO1_08230 prolyl-tRNA synthetase, family II K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D RO1_36950 prolyl-tRNA synthetase, family I K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D RO1_31770 threonyl-tRNA synthetase/Ser-tRNA(Thr) hydrolase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D RO1_38570 Predicted metal-dependent hydrolases related to alanyl-tRNA synthetase HxxxH domain K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D RO1_15240 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D RO1_15230 phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D RO1_26550 Aspartate/tyrosine/aromatic aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D RO1_22920 LL-diaminopimelate aminotransferase apoenzyme K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D RO1_37460 Aspartate/tyrosine/aromatic aminotransferase K10907 K10907; aminotransferase [EC:2.6.1.-]
D RO1_26560 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RO1_12720 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D RO1_40000 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D RO1_06360 acetylornithine aminotransferase apoenzyme K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D RO1_00490 adenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D RO1_03740 branched chain amino acid aminotransferase apoenzyme K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RO1_05300 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:rix00194]
D RO1_41060 ATP synthase F1 subcomplex epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D RO1_31540 ATP synthase F1 subcomplex epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D RO1_41050 ATP synthase F1 subcomplex beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D RO1_31530 ATP synthase F1 subcomplex beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D RO1_41040 ATP synthase, F1 gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D RO1_31520 ATP synthase F1 subcomplex gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D RO1_31510 ATP synthase F1 subcomplex alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D RO1_41020 ATP synthase, F1 delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D RO1_31500 ATP synthase F1 subcomplex delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D RO1_41010 ATP synthase F0 subcomplex B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D RO1_31490 ATP synthase F0 subcomplex B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D RO1_41000 ATP synthase F0 subcomplex C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D RO1_31480 ATP synthase F0 subcomplex C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D RO1_31470 ATP synthase F0 subcomplex A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:rix03000]
D RO1_42050 DNA-methyltransferase (dcm) K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RO1_01720 DNA-methyltransferase (dcm) K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RO1_23890 DNA-methyltransferase (dcm) K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RO1_23900 Site-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RO1_24320 Site-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RO1_21910 AraC-type DNA-binding domain-containing proteins K02099 araC; AraC family transcriptional regulator, arabinose operon regulatory protein
D RO1_08810 AraC-type DNA-binding domain-containing proteins K07506 K07506; AraC family transcriptional regulator
D RO1_39770 Transcriptional regulators K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D RO1_10850 Transcriptional regulators K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D RO1_41320 Transcriptional regulators K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D RO1_22040 Transcriptional regulators K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D RO1_02970 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D RO1_13500 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D RO1_25640 Transcriptional regulators K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D RO1_27250 Transcriptional regulators K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D RO1_38270 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D RO1_25160 Transcriptional regulators K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
D RO1_31260 Transcriptional regulators K03484 scrR; LacI family transcriptional regulator, sucrose operon repressor
D RO1_18040 Transcriptional regulators K03604 purR; LacI family transcriptional regulator, purine nucleotide synthesis repressor
D RO1_39150 transcriptional regulator, GntR family K02103 araR; GntR family transcriptional regulator, arabinose operon transcriptional repressor
D RO1_19390 transcriptional regulator, GntR family K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D RO1_26990 transcriptional regulator, GntR family K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D RO1_06230 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D RO1_39060 Transcriptional regulators K18909 mepR; MarR family transcriptional regulator, repressor for mepA
D RO1_41670 MarR family. K18909 mepR; MarR family transcriptional regulator, repressor for mepA
D RO1_08770 Fe2+/Zn2+ uptake regulation proteins K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D RO1_05490 Fe2+/Zn2+ uptake regulation proteins K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D RO1_01070 Fe2+/Zn2+ uptake regulation proteins K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator
D RO1_17320 transcriptional regulator, IclR family K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
D RO1_42190 transcriptional regulator, BadM/Rrf2 family K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor
D RO1_17940 transcriptional regulator, PadR family K10947 K10947; PadR family transcriptional regulator
D RO1_21600 transcriptional regulator, PadR family K10947 K10947; PadR family transcriptional regulator
D RO1_42240 Mn-dependent transcriptional regulator K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D RO1_20960 Predicted transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D RO1_32930 birA, biotin-[acetyl-CoA-carboxylase] ligase region K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D RO1_25180 Tetratricopeptide repeat./Helix-turn-helix. K20480 nprR; HTH-type transcriptional regulator, quorum sensing regulator NprR
D RO1_23530 transcriptional regulator, CdaR family K02647 cdaR; carbohydrate diacid regulator
D RO1_16330 transcriptional regulator, CdaR family K02647 cdaR; carbohydrate diacid regulator
D RO1_09280 Pleiotropic transcriptional repressor K03706 codY; transcriptional pleiotropic repressor
D RO1_11210 Predicted transcriptional regulator K07727 K07727; putative transcriptional regulator
D RO1_28280 Predicted transcriptional regulator K07727 K07727; putative transcriptional regulator
D RO1_22130 Predicted transcriptional regulator K07727 K07727; putative transcriptional regulator
D RO1_33550 Predicted transcriptional regulator K07727 K07727; putative transcriptional regulator
D RO1_25470 Predicted transcriptional regulator K07727 K07727; putative transcriptional regulator
D RO1_30380 Helix-turn-helix. K07729 K07729; putative transcriptional regulator
D RO1_16700 Predicted transcriptional regulators K07729 K07729; putative transcriptional regulator
D RO1_32320 Helix-turn-helix. K07729 K07729; putative transcriptional regulator
D RO1_07560 transcriptional antiterminator, BglG family K03488 licT; beta-glucoside operon transcriptional antiterminator
D RO1_01500 Uncharacterized protein conserved in bacteria K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D RO1_28660 ParB-like partition proteins K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RO1_29550 ParB-like partition proteins K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RO1_33030 ParB-like partition proteins K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RO1_35750 ParB-like partition proteins K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RO1_21700 Transcriptional regulators, similar to M. xanthus CarD K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D RO1_00760 Glycerol-3-phosphate responsive antiterminator (mRNA-binding) K02443 glpP; glycerol uptake operon antiterminator
D RO1_12490 transcriptional regulator, ArgR family K03402 argR; transcriptional regulator of arginine metabolism
D RO1_05430 heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D RO1_39520 transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR
C 03021 Transcription machinery [BR:rix03021]
D RO1_27320 DEAD_2. K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
D RO1_02610 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D RO1_02600 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D RO1_13940 RNA polymerase Rpb6. K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D RO1_39260 RNA polymerase, sigma 70 subunit, RpoD K03086 rpoD; RNA polymerase primary sigma factor
D RO1_37700 DNA-directed RNA polymerase specialized sigma subunit K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D RO1_21760 RNA polymerase sigma factor, sigma-70 family K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D RO1_00400 RNA polymerase sigma factor, sigma-70 family K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D RO1_43150 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D RO1_33240 hypothetical protein K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D RO1_11570 RNA polymerase, sigma 29 subunit, SigE K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D RO1_11590 RNA polymerase, sigma subunit, RpsG/SigG K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D RO1_03120 RNA polymerase sigma factor, sigma-70 family/RNA polymerase sigma-70 factor, sigma-B/F/G subfamily K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D RO1_22490 RNA polymerase, sigma 30 subunit, SigH K27000 sigH; RNA polymerase sigma-H factor
D RO1_09660 RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG K02405 fliA; RNA polymerase sigma factor FliA
D RO1_10120 transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D RO1_12420 transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D RO1_20190 transcription antitermination protein nusG K02601 nusG; transcription termination/antitermination protein NusG
D RO1_10390 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D RO1_32980 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D RO1_06150 transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:rix03019]
D RO1_14210 Ribonucleases G and E K08301 rng; ribonuclease G [EC:3.1.26.-]
D RO1_22760 RNAse III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D RO1_23110 conserved hypothetical protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D RO1_27190 RNAse R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D RO1_01900 uncharacterized domain HDIG K03698 cbf; 3'-5' exoribonuclease [EC:3.1.-.-]
D RO1_01000 Superfamily II DNA and RNA helicases K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D RO1_05970 ATP-dependent DNA helicase, RecQ family K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D RO1_36490 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RO1_27160 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RO1_10220 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D RO1_06150 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D RO1_25700 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D RO1_05450 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D RO1_09010 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RO1_09930 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D RO1_19670 carbon storage regulator (csrA) K03563 csrA; carbon storage regulator
D RO1_01270 Global regulator protein family. K03563 csrA; carbon storage regulator
D RO1_24910 Predicted P-loop-containing kinase K06958 rapZ; RNase adapter protein RapZ
C 03041 Spliceosome
C 03011 Ribosome [BR:rix03011]
D RO1_03880 Ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D RO1_09710 SSU ribosomal protein S2P K02967 RP-S2; small subunit ribosomal protein S2
D RO1_02250 SSU ribosomal protein S3P K02982 RP-S3; small subunit ribosomal protein S3
D RO1_02030 SSU ribosomal protein S4P K02986 RP-S4; small subunit ribosomal protein S4
D RO1_31150 SSU ribosomal protein S6P K02990 RP-S6; small subunit ribosomal protein S6
D RO1_02580 ribosomal protein S7, bacterial/organelle K02992 RP-S7; small subunit ribosomal protein S7
D RO1_02180 Ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D RO1_02040 SSU ribosomal protein S11P K02948 RP-S11; small subunit ribosomal protein S11
D RO1_02590 SSU ribosomal protein S12P K02950 RP-S12; small subunit ribosomal protein S12
D RO1_02050 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D RO1_10210 SSU ribosomal protein S15P K02956 RP-S15; small subunit ribosomal protein S15
D RO1_22840 SSU ribosomal protein S16P K02959 RP-S16; small subunit ribosomal protein S16
D RO1_31170 SSU ribosomal protein S18P K02963 RP-S18; small subunit ribosomal protein S18
D RO1_02270 SSU ribosomal protein S19P K02965 RP-S19; small subunit ribosomal protein S19
D RO1_06440 SSU ribosomal protein S20P K02968 RP-S20; small subunit ribosomal protein S20
D RO1_10990 SSU ribosomal protein S21P K02970 RP-S21; small subunit ribosomal protein S21
D RO1_20210 ribosomal protein L1, bacterial/chloroplast K02863 RP-L1; large subunit ribosomal protein L1
D RO1_02290 LSU ribosomal protein L2P K02886 RP-L2; large subunit ribosomal protein L2
D RO1_02320 LSU ribosomal protein L3P K02906 RP-L3; large subunit ribosomal protein L3
D RO1_02310 LSU ribosomal protein L4P K02926 RP-L4; large subunit ribosomal protein L4
D RO1_02170 LSU ribosomal protein L6P K02933 RP-L6; large subunit ribosomal protein L6
D RO1_31320 LSU ribosomal protein L9P K02939 RP-L9; large subunit ribosomal protein L9
D RO1_20200 LSU ribosomal protein L11P K02867 RP-L11; large subunit ribosomal protein L11
D RO1_20240 LSU ribosomal protein L12P K02935 RP-L7; large subunit ribosomal protein L7/L12
D RO1_37570 LSU ribosomal protein L13P K02871 RP-L13; large subunit ribosomal protein L13
D RO1_02210 LSU ribosomal protein L14P K02874 RP-L14; large subunit ribosomal protein L14
D RO1_02120 LSU ribosomal protein L15P K02876 RP-L15; large subunit ribosomal protein L15
D RO1_02240 LSU ribosomal protein L16P K02878 RP-L16; large subunit ribosomal protein L16
D RO1_02010 LSU ribosomal protein L17P K02879 RP-L17; large subunit ribosomal protein L17
D RO1_02160 LSU ribosomal protein L18P K02881 RP-L18; large subunit ribosomal protein L18
D RO1_22900 ribosomal protein L19, bacterial type K02884 RP-L19; large subunit ribosomal protein L19
D RO1_10000 LSU ribosomal protein L20P K02887 RP-L20; large subunit ribosomal protein L20
D RO1_14230 LSU ribosomal protein L21P K02888 RP-L21; large subunit ribosomal protein L21
D RO1_02260 LSU ribosomal protein L22P K02890 RP-L22; large subunit ribosomal protein L22
D RO1_02300 Ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D RO1_02200 LSU ribosomal protein L24P K02895 RP-L24; large subunit ribosomal protein L24
D RO1_14250 LSU ribosomal protein L27P K02899 RP-L27; large subunit ribosomal protein L27
D RO1_13690 hypothetical protein K02902 RP-L28; large subunit ribosomal protein L28
D RO1_02230 LSU ribosomal protein L29P K02904 RP-L29; large subunit ribosomal protein L29
D RO1_02130 LSU ribosomal protein L30P K02907 RP-L30; large subunit ribosomal protein L30
D RO1_06160 LSU ribosomal protein L31P K02909 RP-L31; large subunit ribosomal protein L31
D RO1_20170 LSU ribosomal protein L33P K02913 RP-L33; large subunit ribosomal protein L33
D RO1_24430 LSU ribosomal protein L34P K02914 RP-L34; large subunit ribosomal protein L34
D RO1_09990 LSU ribosomal protein L35P K02916 RP-L35; large subunit ribosomal protein L35
D RO1_R_44060 16S; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RO1_R_44050 23S; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:rix03009]
D RO1_22760 RNAse III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D RO1_05360 GTP-binding protein Era K03595 era; GTPase
D RO1_14260 Obg family GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-]
D RO1_10120 transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D RO1_12420 transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D RO1_20190 transcription antitermination protein nusG K02601 nusG; transcription termination/antitermination protein NusG
D RO1_14040 ribosomal small subunit pseudouridine synthase A K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D RO1_00950 dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D RO1_39410 ribosomal RNA small subunit methyltransferase RsmB K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D RO1_13980 RNA methyltransferase, RsmD family K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D RO1_24370 16S rRNA m(7)G-527 methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D RO1_19480 S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D RO1_31060 conserved hypothetical protein TIGR00096 K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D RO1_14870 conserved hypothetical protein TIGR00246 K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D RO1_42750 SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D RO1_02360 Predicted SAM-dependent methyltransferases K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D RO1_39420 23S rRNA m(2)A-2503 methyltransferase K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D RO1_42790 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D RO1_01890 23S rRNA m(5)U-1939 methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D RO1_26620 23S rRNA m(5)U-1939 methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D RO1_14060 Pseudouridylate synthases, 23S RNA-specific K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D RO1_09210 pseudouridine synthase, RluA family K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D RO1_36940 ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D RO1_12350 ribosomal large subunit pseudouridine synthase F K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
D RO1_38760 ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D RO1_22880 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D RO1_13950 SSU ribosomal protein S12P methylthiotransferase K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D RO1_23020 [LSU ribosomal protein L11P]-lysine N-methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D RO1_14210 Ribonucleases G and E K08301 rng; ribonuclease G [EC:3.1.26.-]
D RO1_23090 conserved hypothetical protein TIGR00250 K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D RO1_22460 Uncharacterized protein conserved in bacteria K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-]
D RO1_01000 Superfamily II DNA and RNA helicases K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D RO1_39450 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D RO1_23440 ribosome-associated GTPase EngA K03977 engA; GTPase
D RO1_23330 ribosome biogenesis GTP-binding protein YlqF K14540 rbgA; ribosome biogenesis GTPase A
D RO1_21790 GTP-binding protein HflX K03665 hflX; GTPase
D RO1_31400 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D RO1_21850 (p)ppGpp synthetase, RelA/SpoT family K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D RO1_10160 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D RO1_10110 Uncharacterized protein conserved in bacteria K09748 rimP; ribosome maturation factor RimP
D RO1_24460 Uncharacterized conserved protein K14761 rlbA; ribosome-associated protein
D RO1_14300 iojap-related protein K09710 ybeB; ribosome-associated protein
D RO1_14710 conserved hypothetical protein TIGR00043 K07042 ybeY; probable rRNA maturation factor
D RO1_14270 conserved hypothetical protein TIGR00253 K07574 yhbY; RNA-binding protein
D RO1_38130 SSU ribosomal protein S30P/sigma 54 modulation protein K05808 hpf; ribosome hibernation promoting factor
D RO1_39500 GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase
C 03016 Transfer RNA biogenesis [BR:rix03016]
D RO1_38780 RNAse Z K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D RO1_36970 uncharacterized domain HDIG K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D RO1_08230 prolyl-tRNA synthetase, family II K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D RO1_36950 prolyl-tRNA synthetase, family I K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D RO1_03810 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D RO1_13160 leucyl-tRNA synthetase, eubacterial and mitochondrial family K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RO1_00860 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D RO1_06210 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D RO1_11980 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RO1_32990 Lysyl-tRNA synthetase (class II) K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D RO1_21980 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RO1_38570 Predicted metal-dependent hydrolases related to alanyl-tRNA synthetase HxxxH domain K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D RO1_03970 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D RO1_05390 glycyl-tRNA synthetase, dimeric type K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D RO1_31770 threonyl-tRNA synthetase/Ser-tRNA(Thr) hydrolase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D RO1_17450 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D RO1_22450 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D RO1_03050 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D RO1_21970 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D RO1_15240 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D RO1_15230 phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D RO1_00380 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RO1_23300 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D RO1_32150 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D RO1_30720 tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D RO1_17880 pseudouridylate synthase I K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D RO1_10180 tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D RO1_42280 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RO1_07430 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RO1_31400 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D RO1_14630 tRNA isopentenyltransferase (miaA) K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D RO1_24390 tRNA modification GTPase trmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D RO1_24380 glucose-inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D RO1_42540 selenophosphate synthase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D RO1_24420 ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D RO1_44070 Bacterial RNase P class A K01978 rnpB; M1 RNA
D RO1_38980 aspartyl-tRNA synthetase, archaeal type K09759 aspC; nondiscriminating aspartyl-tRNA synthetase [EC:6.1.1.23]
D RO1_09160 glutamyl-tRNA synthetase, bacterial family K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D RO1_37290 ybaK/ebsC protein K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D RO1_01110 Cytosine/adenosine deaminases K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D RO1_13330 tRNA-i(6)A37 thiotransferase enzyme MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D RO1_23070 MiaB-like tRNA modifying enzyme K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
D RO1_22890 tRNA (guanine-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D RO1_39270 Predicted SAM-dependent methyltransferase K06967 trmK; tRNA (adenine22-N1)-methyltransferase [EC:2.1.1.217]
D RO1_37470 Predicted rRNA methylase (SpoU class) K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D RO1_25710 rRNA methylases K03437 spoU; RNA methyltransferase, TrmH family
D RO1_22380 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D RO1_08460 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D RO1_15220 S-adenosylmethionine--tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D RO1_12960 Uncharacterized protein conserved in bacteria K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6]
D RO1_05180 tRNA-guanine transglycosylase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D RO1_23050 thiazole biosynthesis/tRNA modification protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D RO1_37110 tRNA(Ile)-lysidine synthetase, N-terminal domain/tRNA(Ile)-lysidine synthetase, C-terminal domain K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D RO1_38750 Inactive homolog of metal-dependent proteases, putative molecular chaperone K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D RO1_38800 O-sialoglycoprotein endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D RO1_38740 conserved hypothetical nucleotide-binding protein K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D RO1_19190 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D RO1_22660 Predicted nucleotidyltransferase K27343 tmcAL; tRNAmet cytidine acetate ligase [EC:6.3.1.22]
D RO1_27190 RNAse R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D RO1_10220 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:rix03012]
D RO1_10150 bacterial translation initiation factor 2 (bIF-2) K02519 infB; translation initiation factor IF-2
D RO1_09980 bacterial translation initiation factor 3 (bIF-3) K02520 infC; translation initiation factor IF-3
D RO1_15020 ATPase components of ABC transporters with duplicated ATPase domains K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D RO1_05870 ATPase components of ABC transporters with duplicated ATPase domains K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D RO1_09720 translation elongation factor Ts (EF-Ts) K02357 tsf; elongation factor Ts
D RO1_02560 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu
D RO1_15110 translation elongation factor 2 (EF-2/EF-G) K02355 fusA; elongation factor G
D RO1_06190 bacterial peptide chain release factor 1 (bRF-1) K02835 prfA; peptide chain release factor 1
D RO1_09810 ribosome recycling factor K02838 frr; ribosome recycling factor
D RO1_06180 protein-(glutamine-N5) methyltransferase, release factor-specific K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D RO1_36770 peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D RO1_02060 translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D RO1_39570 translation elongation factor P (EF-P) K02356 efp; elongation factor P
D RO1_16400 bacterial peptide chain release factor 2 (bRF-2) K02836 prfB; peptide chain release factor 2
C 03110 Chaperones and folding catalysts [BR:rix03110]
D RO1_25580 ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D RO1_04150 ATPases with chaperone activity, ATP-binding subunit K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D RO1_02890 endopeptidase Clp ATP-binding regulatory subunit (clpX) K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D RO1_17340 endopeptidase Clp ATP-binding regulatory subunit (clpX) K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D RO1_07880 Molecular chaperone, HSP90 family K04079 HSP90A; molecular chaperone HtpG
D RO1_35670 Molecular chaperone, HSP90 family K04079 HSP90A; molecular chaperone HtpG
D RO1_05450 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D RO1_10070 Molecular chaperone K04045 hscC; molecular chaperone HscC
D RO1_09010 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RO1_05460 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D RO1_39320 DnaJ-class molecular chaperone with C-terminal Zn finger domain K03686 dnaJ; molecular chaperone DnaJ
D RO1_17200 Disulfide bond chaperones of the HSP33 family K04083 hslO; molecular chaperone Hsp33
D RO1_05440 Molecular chaperone GrpE (heat shock protein) K03687 GRPE; molecular chaperone GrpE
D RO1_03350 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein
D RO1_09000 Co-chaperonin GroES (HSP10) K04078 groES; chaperonin GroES
D RO1_21080 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain K04771 degP; serine protease Do [EC:3.4.21.107]
D RO1_01920 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain K04771 degP; serine protease Do [EC:3.4.21.107]
D RO1_33930 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D RO1_24960 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D RO1_31470 ATP synthase F0 subcomplex A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D RO1_07810 Zn finger protein HypA/HybF (possibly regulating hydrogenase expression) K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF
D RO1_07790 hydrogenase accessory protein HypB K04652 hypB; hydrogenase nickel incorporation protein HypB
D RO1_06510 Subtilisin-like serine proteases K14647 vpr; minor extracellular serine protease Vpr [EC:3.4.21.-]
D RO1_41420 N-acetyl-beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D RO1_17460 Peptidyl-prolyl cis-trans isomerase (rotamase)-cyclophilin family K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D RO1_04620 PPIC-type PPIASE domain. K07533 prsA; foldase protein PrsA [EC:5.2.1.8]
D RO1_36800 hypothetical protein K07533 prsA; foldase protein PrsA [EC:5.2.1.8]
D RO1_41720 Thioredoxin domain-containing protein K03671 TXN; thioredoxin
D RO1_12120 thioredoxin K03671 TXN; thioredoxin
C 04131 Membrane trafficking [BR:rix04131]
D RO1_08700 Alpha-mannosidase K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24]
D RO1_41300 Alpha-mannosidase K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24]
D RO1_41390 Alpha-mannosidase K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24]
D RO1_27430 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RO1_16940 Fructose-2,6-bisphosphatase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D RO1_02930 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RO1_07880 Molecular chaperone, HSP90 family K04079 HSP90A; molecular chaperone HtpG
D RO1_35670 Molecular chaperone, HSP90 family K04079 HSP90A; molecular chaperone HtpG
D RO1_00570 Permeases of the major facilitator superfamily K06902 UMF1; MFS transporter, UMF1 family
C 04121 Ubiquitin system
C 03051 Proteasome [BR:rix03051]
D RO1_07880 Molecular chaperone, HSP90 family K04079 HSP90A; molecular chaperone HtpG
D RO1_35670 Molecular chaperone, HSP90 family K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:rix03032]
D RO1_42050 DNA-methyltransferase (dcm) K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RO1_01720 DNA-methyltransferase (dcm) K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RO1_23890 DNA-methyltransferase (dcm) K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RO1_23900 Site-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RO1_24320 Site-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RO1_37020 Bacterial nucleoid DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D RO1_24440 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D RO1_31330 primary replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D RO1_33320 phage DNA replication protein (predicted replicative helicase loader) K02315 dnaC; DNA replication protein DnaC
D RO1_36690 replicative DNA helicase loader DnaI K02315 dnaC; DNA replication protein DnaC
D RO1_33440 phage DNA replication protein (predicted replicative helicase loader) K02315 dnaC; DNA replication protein DnaC
D RO1_39250 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D RO1_31160 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D RO1_33540 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D RO1_25690 DNA polymerase III catalytic subunit, DnaE type K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RO1_09870 exonuclease, DNA polymerase III, epsilon subunit family K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D RO1_09880 DNA polymerase III, alpha subunit (gram-positive type) K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D RO1_24450 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RO1_30810 DNA polymerase III, gamma/tau subunits K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RO1_01330 exonuclease, DNA polymerase III, epsilon subunit family K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RO1_37390 exonuclease, DNA polymerase III, epsilon subunit family K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RO1_01230 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RO1_22570 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RO1_12360 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D RO1_23560 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D RO1_24490 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D RO1_23550 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D RO1_24480 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
C 03036 Chromosome and associated proteins [BR:rix03036]
D RO1_42050 DNA-methyltransferase (dcm) K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RO1_01720 DNA-methyltransferase (dcm) K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RO1_23890 DNA-methyltransferase (dcm) K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RO1_23900 Site-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RO1_24320 Site-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RO1_22760 RNAse III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D RO1_37020 Bacterial nucleoid DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D RO1_24440 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D RO1_22770 condensin subunit Smc K03529 smc; chromosome segregation protein
D RO1_15680 Uncharacterized conserved protein K05896 scpA; segregation and condensation protein A
D RO1_15670 segregation and condensation protein B K06024 scpB; segregation and condensation protein B
D RO1_16340 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D RO1_11480 Septum formation initiator. K03586 ftsL; cell division protein FtsL
D RO1_11540 Cell division septal protein K03589 ftsQ; cell division protein FtsQ
D RO1_11530 Bacterial cell division membrane protein K03588 ftsW; cell division protein FtsW
D RO1_16350 cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D RO1_13380 cell division protein ZapA K09888 zapA; cell division protein ZapA
D RO1_20310 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D RO1_40940 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D RO1_31910 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D RO1_24980 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D RO1_12690 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D RO1_12700 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D RO1_14550 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D RO1_12710 cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D RO1_14540 Septum formation topological specificity factor MinE. K03608 minE; cell division topological specificity factor
D RO1_14450 Uncharacterized protein conserved in bacteria K09772 sepF; cell division inhibitor SepF
D RO1_34540 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D RO1_14600 Actin-like ATPase involved in cell morphogenesis K03569 mreB; rod shape-determining protein MreB and related proteins
D RO1_14590 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D RO1_14580 rod shape-determining protein MreD. K03571 mreD; rod shape-determining protein MreD
D RO1_14530 Bacterial cell division membrane protein K05837 rodA; rod shape determining protein RodA
D RO1_42810 ATPases involved in chromosome partitioning K03496 parA; chromosome partitioning protein
D RO1_06520 CobQ/CobB/MinD/ParA nucleotide binding domain. K03496 parA; chromosome partitioning protein
D RO1_33020 ATPases involved in chromosome partitioning K03496 parA; chromosome partitioning protein
D RO1_35740 ATPases involved in chromosome partitioning K03496 parA; chromosome partitioning protein
D RO1_28660 ParB-like partition proteins K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RO1_29550 ParB-like partition proteins K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RO1_33030 ParB-like partition proteins K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RO1_35750 ParB-like partition proteins K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RO1_24380 glucose-inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D RO1_24370 16S rRNA m(7)G-527 methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D RO1_14340 Site-specific recombinase XerD K03733 xerC; integrase/recombinase XerC
D RO1_12240 tyrosine recombinase XerD subunit K04763 xerD; integrase/recombinase XerD
D RO1_29460 Site-specific recombinase XerD K04763 xerD; integrase/recombinase XerD
D RO1_21670 Site-specific recombinase XerD K04763 xerD; integrase/recombinase XerD
D RO1_25730 Protein involved in cell division K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D RO1_02910 ribosome biogenesis GTP-binding protein YsxC/EngB K03978 engB; GTP-binding protein
D RO1_24900 conserved hypothetical protein K09762 whiA; cell division protein WhiA
C 03400 DNA repair and recombination proteins [BR:rix03400]
D RO1_22360 Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D RO1_21310 A/G-specific DNA glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D RO1_14830 Predicted EndoIII-related endonuclease K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D RO1_27320 DEAD_2. K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
D RO1_02850 ADP-ribose pyrophosphatase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D RO1_04290 ADP-ribose pyrophosphatase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D RO1_11250 ADP-ribose pyrophosphatase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D RO1_23470 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D RO1_12730 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D RO1_05580 Endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D RO1_17890 exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D RO1_12360 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D RO1_22570 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RO1_39900 Excinuclease ATPase subunit K03701 uvrA; excinuclease ABC subunit A
D RO1_34490 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D RO1_34480 excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B
D RO1_24950 excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C
D RO1_09170 Superfamily I DNA and RNA helicases K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RO1_26600 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RO1_06010 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RO1_02610 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D RO1_02600 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D RO1_13940 RNA polymerase Rpb6. K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D RO1_14660 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D RO1_01930 Mismatch repair ATPase (MutS family) K07456 mutS2; DNA mismatch repair protein MutS2
D RO1_14640 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D RO1_12430 exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D RO1_12440 Exonuclease VII small subunit. K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D RO1_25690 DNA polymerase III catalytic subunit, DnaE type K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RO1_09870 exonuclease, DNA polymerase III, epsilon subunit family K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D RO1_09880 DNA polymerase III, alpha subunit (gram-positive type) K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D RO1_24450 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RO1_30810 DNA polymerase III, gamma/tau subunits K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RO1_01330 exonuclease, DNA polymerase III, epsilon subunit family K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RO1_37390 exonuclease, DNA polymerase III, epsilon subunit family K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RO1_01230 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RO1_31160 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D RO1_33540 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D RO1_34580 helicase, putative, RecD/TraA family K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D RO1_12150 protein RecA K03553 recA; recombination protein RecA
D RO1_13360 Holliday junction DNA helicase subunit RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D RO1_13370 Holliday junction DNA helicase, RuvB subunit K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D RO1_08020 hypothetical protein K03546 sbcC; DNA repair protein SbcC/Rad50
D RO1_08010 exonuclease SbcD K03547 sbcD; DNA repair protein SbcD/Mre11
D RO1_24470 recF protein K03629 recF; DNA replication and repair protein RecF
D RO1_13720 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D RO1_14150 hypothetical protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D RO1_37590 Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D RO1_37790 hypothetical protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D RO1_01540 recombination protein RecR K06187 recR; recombination protein RecR
D RO1_12500 DNA replication and repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D RO1_14070 Penicillin-binding protein-related factor A, putative recombinase K03700 recU; recombination protein U
D RO1_04580 recombination helicase AddA, Firmicutes type K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
D RO1_04570 ATP-dependent nuclease subunit B K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
D RO1_25820 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1
D RO1_23560 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D RO1_24490 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D RO1_23550 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D RO1_24480 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D RO1_37020 Bacterial nucleoid DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D RO1_05970 ATP-dependent DNA helicase, RecQ family K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D RO1_13080 Nucleotidyltransferase/DNA polymerase involved in DNA repair K03502 umuC; DNA polymerase V
D RO1_14310 SOS-response transcriptional repressor, LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D RO1_12160 Uncharacterized protein conserved in bacteria K03565 recX; regulatory protein
D RO1_07280 Rad3-related DNA helicases K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D RO1_10170 Exopolyphosphatase-related proteins K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:rix03029]
D RO1_10150 bacterial translation initiation factor 2 (bIF-2) K02519 infB; translation initiation factor IF-2
D RO1_09980 bacterial translation initiation factor 3 (bIF-3) K02520 infC; translation initiation factor IF-3
D RO1_09720 translation elongation factor Ts (EF-Ts) K02357 tsf; elongation factor Ts
D RO1_02560 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu
D RO1_15110 translation elongation factor 2 (EF-2/EF-G) K02355 fusA; elongation factor G
D RO1_05360 GTP-binding protein Era K03595 era; GTPase
D RO1_00380 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RO1_13160 leucyl-tRNA synthetase, eubacterial and mitochondrial family K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RO1_21980 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RO1_05390 glycyl-tRNA synthetase, dimeric type K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D RO1_11980 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RO1_39010 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D RO1_39020 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D RO1_31160 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D RO1_33540 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D RO1_05450 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D RO1_05440 Molecular chaperone GrpE (heat shock protein) K03687 GRPE; molecular chaperone GrpE
D RO1_09010 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RO1_09000 Co-chaperonin GroES (HSP10) K04078 groES; chaperonin GroES
D RO1_05460 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D RO1_39320 DnaJ-class molecular chaperone with C-terminal Zn finger domain K03686 dnaJ; molecular chaperone DnaJ
D RO1_42280 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RO1_07430 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RO1_24410 membrane protein insertase, YidC/Oxa1 family, C-terminal domain K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RO1_07880 Molecular chaperone, HSP90 family K04079 HSP90A; molecular chaperone HtpG
D RO1_35670 Molecular chaperone, HSP90 family K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:rix02000]
D RO1_03640 ABC-type multidrug transport system, ATPase and permease components K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D RO1_08060 ABC-type multidrug transport system, ATPase and permease components K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D RO1_10310 ABC-type multidrug transport system, ATPase and permease components K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D RO1_02840 ABC-type multidrug transport system, ATPase and permease components K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D RO1_08070 ABC-type multidrug transport system, ATPase and permease components K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D RO1_10320 ABC-type multidrug transport system, ATPase and permease components K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D RO1_20870 ABC-type multidrug transport system, ATPase and permease components K24846 pglK; ATP-binding cassette, subfamily B, bacterial PglK [EC:7.5.2.-]
D RO1_12280 ABC-type multidrug transport system, ATPase and permease components K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D RO1_39050 ABC-type multidrug transport system, ATPase and permease components K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D RO1_18980 ABC-type multidrug transport system, ATPase and permease components K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D RO1_26960 ABC-type multidrug transport system, ATPase and permease components K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D RO1_26980 ABC-type multidrug transport system, ATPase and permease components K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D RO1_39040 ABC-type multidrug transport system, ATPase and permease components K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D RO1_18990 ABC-type multidrug transport system, ATPase and permease components K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D RO1_12290 ABC-type multidrug transport system, ATPase and permease components K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D RO1_11020 ABC-type multidrug transport system, ATPase and permease components K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D RO1_15600 ABC-type multidrug transport system, ATPase and permease components K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D RO1_37970 ABC-type multidrug transport system, ATPase and permease components K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D RO1_37980 ABC-type multidrug transport system, ATPase and permease components K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D RO1_25980 ATPase components of ABC transporters with duplicated ATPase domains K15738 uup; ABC transport system ATP-binding/permease protein
D RO1_37140 sulfate/thiosulfate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D RO1_37150 sulfate ABC transporter, permease protein CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D RO1_37160 sulfate ABC transporter, permease protein CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D RO1_37170 sulfate ABC transporter, ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D RO1_42610 molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D RO1_42620 molybdate ABC transporter, permease protein K02018 modB; molybdate transport system permease protein
D RO1_42630 ABC-type sulfate/molybdate transport systems, ATPase component K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D RO1_18850 ABC-type Fe3+ transport system, periplasmic component K02012 afuA; iron(III) transport system substrate-binding protein
D RO1_18870 ABC-type Fe3+ transport system, permease component K02011 afuB; iron(III) transport system permease protein
D RO1_18860 ABC-type spermidine/putrescine transport systems, ATPase components K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D RO1_12560 Spermidine/putrescine-binding periplasmic protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D RO1_12570 ABC-type spermidine/putrescine transport system, permease component II K11070 potC; spermidine/putrescine transport system permease protein
D RO1_12580 ABC-type spermidine/putrescine transport system, permease component I K11071 potB; spermidine/putrescine transport system permease protein
D RO1_12590 spermidine/putrescine ABC transporter ATP-binding subunit K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D RO1_31030 ABC transporter, substrate-binding protein, aliphatic sulfonates family K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D RO1_36580 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D RO1_31040 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D RO1_36570 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D RO1_31050 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D RO1_36560 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D RO1_23520 carbohydrate ABC transporter ATP-binding protein, CUT1 family (TC 3.A.1.1.-) K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D RO1_10820 carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-) K25086 musE; maltose transport system substrate-binding protein
D RO1_31200 carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-) K25086 musE; maltose transport system substrate-binding protein
D RO1_31230 carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-) K25088 musG; maltose transport system permease protein
D RO1_10840 carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-) K25088 musG; maltose transport system permease protein
D RO1_09140 carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-) K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D RO1_06370 hypothetical protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D RO1_26420 Maltose-binding periplasmic proteins/domains K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D RO1_26430 carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-) K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D RO1_26440 carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-) K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D RO1_25120 carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-) K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D RO1_18050 carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-) K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D RO1_18060 carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-) K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D RO1_18070 carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-) K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D RO1_02990 carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-) K10240 cebE; cellobiose transport system substrate-binding protein
D RO1_08820 carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-) K10240 cebE; cellobiose transport system substrate-binding protein
D RO1_08840 carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-) K10241 cebF; cellobiose transport system permease protein
D RO1_08850 carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-) K10242 cebG; cellobiose transport system permease protein
D RO1_13230 carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-) K10188 lacE; lactose/L-arabinose transport system substrate-binding protein
D RO1_13240 carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-) K10189 lacF; lactose/L-arabinose transport system permease protein
D RO1_13250 carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-) K10190 lacG; lactose/L-arabinose transport system permease protein
D RO1_13570 ABC-type sugar transport system, periplasmic component K17318 lplA; putative aldouronate transport system substrate-binding protein
D RO1_41350 carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-) K17318 lplA; putative aldouronate transport system substrate-binding protein
D RO1_12840 ABC-type sugar transport system, periplasmic component K17318 lplA; putative aldouronate transport system substrate-binding protein
D RO1_26330 carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-) K17318 lplA; putative aldouronate transport system substrate-binding protein
D RO1_12780 carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-) K17318 lplA; putative aldouronate transport system substrate-binding protein
D RO1_19030 ABC-type sugar transport system, periplasmic component K17318 lplA; putative aldouronate transport system substrate-binding protein
D RO1_30020 hypothetical protein K17318 lplA; putative aldouronate transport system substrate-binding protein
D RO1_22080 ABC-type sugar transport system, periplasmic component K17318 lplA; putative aldouronate transport system substrate-binding protein
D RO1_13590 ABC-type polysaccharide transport system, permease component K17319 lplB; putative aldouronate transport system permease protein
D RO1_19050 ABC-type polysaccharide transport system, permease component K17319 lplB; putative aldouronate transport system permease protein
D RO1_41330 carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-) K17319 lplB; putative aldouronate transport system permease protein
D RO1_26340 carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-) K17319 lplB; putative aldouronate transport system permease protein
D RO1_12760 carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-) K17319 lplB; putative aldouronate transport system permease protein
D RO1_30000 carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-) K17319 lplB; putative aldouronate transport system permease protein
D RO1_26350 carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-) K17320 lplC; putative aldouronate transport system permease protein
D RO1_13600 carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-) K17320 lplC; putative aldouronate transport system permease protein
D RO1_41340 carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-) K17320 lplC; putative aldouronate transport system permease protein
D RO1_22060 ABC-type sugar transport system, permease component K17320 lplC; putative aldouronate transport system permease protein
D RO1_12770 carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-) K17320 lplC; putative aldouronate transport system permease protein
D RO1_30010 carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-) K17320 lplC; putative aldouronate transport system permease protein
D RO1_17740 monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-) K10540 mglB; methyl-galactoside transport system substrate-binding protein
D RO1_17820 monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-) K10540 mglB; methyl-galactoside transport system substrate-binding protein
D RO1_17760 monosaccharide ABC transporter membrane protein, CUT2 family (TC 3.A.1.2.-) K10541 mglC; methyl-galactoside transport system permease protein
D RO1_17750 monosaccharide ABC transporter ATP-binding protein, CUT2 family (TC 3.A.1.2.-) K10542 mglA; methyl-galactoside transport system ATP-binding protein [EC:7.5.2.11]
D RO1_03480 hypothetical protein K10439 rbsB; ribose transport system substrate-binding protein
D RO1_03470 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components K10440 rbsC; ribose transport system permease protein
D RO1_03460 ABC-type sugar transport system, ATPase component K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D RO1_23670 monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-) K23508 ytfQ; galactofuranose transport system substrate-binding protein
D RO1_23720 monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-) K23508 ytfQ; galactofuranose transport system substrate-binding protein
D RO1_23710 monosaccharide ABC transporter membrane protein, CUT2 family (TC 3.A.1.2.-) K23509 ytfT; galactofuranose transport system permease protein
D RO1_23700 monosaccharide ABC transporter membrane protein, CUT2 family (TC 3.A.1.2.-) K23509 ytfT; galactofuranose transport system permease protein
D RO1_23680 monosaccharide ABC transporter ATP-binding protein, CUT2 family (TC 3.A.1.2.-) K10820 ytfR; galactofuranose transport system ATP-binding protein [EC:7.5.2.9]
D RO1_38310 carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-) K17234 araN; arabinooligosaccharide transport system substrate-binding protein
D RO1_38320 carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-) K17235 araP; arabinooligosaccharide transport system permease protein
D RO1_38330 carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-) K17236 araQ; arabinooligosaccharide transport system permease protein
D RO1_11230 nucleoside-binding protein K07335 bmpA; basic membrane protein A and related proteins
D RO1_23190 nucleoside-binding protein K07335 bmpA; basic membrane protein A and related proteins
D RO1_23210 nucleoside ABC transporter membrane protein K23535 nupB; general nucleoside transport system permease protein
D RO1_23220 nucleoside ABC transporter membrane protein K23536 nupC; general nucleoside transport system permease protein
D RO1_08650 ABC-type sugar transport system, periplasmic component K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D RO1_18840 ABC-type sugar transport system, periplasmic component K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D RO1_22180 ABC-type sugar transport system, periplasmic component K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D RO1_39750 ABC-type sugar transport system, periplasmic component K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D RO1_39680 carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-) K02025 ABC.MS.P; multiple sugar transport system permease protein
D RO1_22200 carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-) K02025 ABC.MS.P; multiple sugar transport system permease protein
D RO1_22220 ABC-type sugar transport system, permease component K02026 ABC.MS.P1; multiple sugar transport system permease protein
D RO1_00600 phosphate ABC transporter substrate-binding protein, PhoT family (TC 3.A.1.7.1) K02040 pstS; phosphate transport system substrate-binding protein
D RO1_33510 hypothetical protein K02040 pstS; phosphate transport system substrate-binding protein
D RO1_00610 phosphate ABC transporter membrane protein 1, PhoT family (TC 3.A.1.7.1) K02037 pstC; phosphate transport system permease protein
D RO1_00620 phosphate ABC transporter membrane protein 2, PhoT family (TC 3.A.1.7.1) K02038 pstA; phosphate transport system permease protein
D RO1_00630 phosphate ABC transporter ATP-binding protein, PhoT family (TC 3.A.1.7.1) K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D RO1_31720 phosphate/phosphite/phosphonate ABC transporters, periplasmic binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D RO1_31740 phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein
D RO1_31750 phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein
D RO1_31730 phosphonate ABC transporter, ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D RO1_41160 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain K02424 tcyA; L-cystine transport system substrate-binding protein
D RO1_41130 ABC-type polar amino acid transport system, ATPase component K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D RO1_22990 amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family K17077 artQ; arginine/lysine/histidine transport system permease protein
D RO1_23000 amino acid ABC transporter ATP-binding protein, PAAT family (TC 3.A.1.3.-) K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D RO1_20500 amino acid/amide ABC transporter substrate-binding protein, HAAT family (TC 3.A.1.4.-) K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RO1_20510 amino acid/amide ABC transporter membrane protein 1, HAAT family (TC 3.A.1.4.-) K01997 livH; branched-chain amino acid transport system permease protein
D RO1_20520 amino acid/amide ABC transporter membrane protein 2, HAAT family (TC 3.A.1.4.-) K01998 livM; branched-chain amino acid transport system permease protein
D RO1_20530 amino acid/amide ABC transporter ATP-binding protein 1, HAAT family (TC 3.A.1.4.-) K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RO1_20540 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family (TC 3.A.1.4.-) K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RO1_34230 ABC-type metal ion transport system, periplasmic component/surface antigen K02073 metQ; D-methionine transport system substrate-binding protein
D RO1_34220 ABC-type metal ion transport system, permease component K02072 metI; D-methionine transport system permease protein
D RO1_34210 ABC-type metal ion transport system, ATPase component K02071 metN; D-methionine transport system ATP-binding protein
D RO1_11070 ABC-type uncharacterized transport system, periplasmic component K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein
D RO1_34610 ABC-type uncharacterized transport system, periplasmic component K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein
D RO1_11080 ABC-type uncharacterized transport system, permease component K05832 K05832; putative tryptophan/tyrosine transport system permease protein
D RO1_34600 ABC-type uncharacterized transport system, permease component K05832 K05832; putative tryptophan/tyrosine transport system permease protein
D RO1_11090 ABC-type uncharacterized transport system, ATPase component K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein
D RO1_34590 ABC-type uncharacterized transport system, ATPase component K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein
D RO1_01370 amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-) K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D RO1_19210 ABC-type oligopeptide transport system, periplasmic component K15580 oppA; oligopeptide transport system substrate-binding protein
D RO1_19230 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K15582 oppC; oligopeptide transport system permease protein
D RO1_19240 oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain K15583 oppD; oligopeptide transport system ATP-binding protein
D RO1_19250 ATPase components of various ABC-type transport systems, contain duplicated ATPase K10823 oppF; oligopeptide transport system ATP-binding protein
D RO1_20430 Bacterial extracellular solute-binding proteins, family 5 Middle. K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RO1_06250 ABC-type dipeptide transport system, periplasmic component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RO1_20440 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RO1_06280 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RO1_20450 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RO1_06290 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RO1_20460 oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RO1_06260 oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RO1_06270 oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain K02032 ddpF; peptide/nickel transport system ATP-binding protein
D RO1_30860 ABC-type Fe3+-hydroxamate transport system, periplasmic component K25308 fhuD; ferric hydroxamate/heme transport system substrate-binding protein
D RO1_30870 ABC-type Fe3+-siderophore transport system, permease component K25288 fhuB; ferric hydroxamate/heme transport system permease protein
D RO1_30880 ABC-type Fe3+-siderophore transport system, permease component K25289 fhuG; ferric hydroxamate/heme transport system permease protein
D RO1_30890 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components K25290 fhuA; ferric hydroxamate/heme transport system ATP-binding protein [EC:7.2.2.16]
D RO1_41560 ABC-type Fe3+-siderophore transport system, permease component K02015 ABC.FEV.P; iron complex transport system permease protein
D RO1_41550 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D RO1_19350 ABC-type Fe3+-hydroxamate transport system, periplasmic component K25034 btuF; cobalamin transport system substrate-binding protein
D RO1_19360 ABC-type Fe3+-siderophore transport system, permease component K25027 btuC; cobalamin transport system permease protein
D RO1_19370 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8]
D RO1_20360 cobalt ABC transporter, permease protein CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein
D RO1_20350 ABC-type Co2+ transport system, permease component K02007 cbiM; cobalt/nickel transport system permease protein
D RO1_20370 ABC-type cobalt transport system, ATPase component K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D RO1_10780 Uncharacterized conserved protein K03523 bioY; biotin transport system substrate-specific component
D RO1_00450 Uncharacterized conserved protein K03523 bioY; biotin transport system substrate-specific component
D RO1_37510 ABC-type cobalt transport system, permease component CbiQ and related transporters K16785 ecfT; energy-coupling factor transport system permease protein
D RO1_37480 ABC-type cobalt transport system, ATPase component K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D RO1_37500 ABC-type cobalt transport system, ATPase component K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D RO1_35100 ABC-type polysaccharide/polyol phosphate export systems, permease component K09690 wzm; homopolymeric O-antigen transport system permease protein
D RO1_35380 ABC-type polysaccharide/polyol phosphate export systems, permease component K09690 wzm; homopolymeric O-antigen transport system permease protein
D RO1_35400 ABC-type polysaccharide/polyol phosphate transport system, ATPase component K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D RO1_35110 ABC-type polysaccharide/polyol phosphate transport system, ATPase component K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D RO1_34780 ABC-type polysaccharide/polyol phosphate export systems, permease component K09692 tagG; teichoic acid transport system permease protein
D RO1_34790 ABC-type polysaccharide/polyol phosphate transport system, ATPase component K09693 tagH; teichoic acid transport system ATP-binding protein [EC:7.5.2.4]
D RO1_21360 ABC-2 type transporter. K09696 natB; sodium transport system permease protein
D RO1_21350 ABC-type multidrug transport system, ATPase component K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D RO1_37830 ABC-type multidrug transport system, ATPase component K20459 nukF; lantibiotic transport system ATP-binding protein
D RO1_37840 Uncharacterized protein conserved in bacteria K20460 nukE; lantibiotic transport system permease protein
D RO1_37850 Uncharacterized protein conserved in bacteria K20461 nukG; lantibiotic transport system permease protein
D RO1_33970 hypothetical protein K20491 nisE; lantibiotic transport system permease protein
D RO1_33980 hypothetical protein K20492 nisG; lantibiotic transport system permease protein
D RO1_33960 ABC-type multidrug transport system, ATPase component K20490 nisF; lantibiotic transport system ATP-binding protein
D RO1_11330 ABC-type transport system involved in multi-copper enzyme maturation, permease component K25151 gldF; gliding motility-associated transport system permease protein
D RO1_32240 Predicted permease. K19084 braE; bacitracin transport system permease protein
D RO1_32220 ABC-type antimicrobial peptide transport system, ATPase component K19083 braD; bacitracin transport system ATP-binding protein
D RO1_23430 hypothetical protein K16919 ytrC_D; acetoin utilization transport system permease protein
D RO1_23420 ABC-type multidrug transport system, ATPase component K16921 ytrB; acetoin utilization transport system ATP-binding protein
D RO1_17420 ABC-type antimicrobial peptide transport system, permease component K24948 yknZ; antimicrobial peptide resistance transport system permease protein
D RO1_17400 ABC-type antimicrobial peptide transport system, ATPase component K24949 yknY; antimicrobial peptide resistance transport system ATP-binding protein [EC:7.6.2.-]
D RO1_16350 cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D RO1_16340 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D RO1_29690 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D RO1_05910 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D RO1_42680 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RO1_11140 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RO1_05900 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RO1_43110 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RO1_29710 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RO1_43120 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RO1_18790 ABC-type transport system, involved in lipoprotein release, permease component K02004 ABC.CD.P; putative ABC transport system permease protein
D RO1_30480 ABC-type antimicrobial peptide transport system, permease component K02004 ABC.CD.P; putative ABC transport system permease protein
D RO1_04850 ABC-type transport system, involved in lipoprotein release, permease component K02004 ABC.CD.P; putative ABC transport system permease protein
D RO1_05030 ABC-type antimicrobial peptide transport system, permease component K02004 ABC.CD.P; putative ABC transport system permease protein
D RO1_37660 ABC-type transport system, involved in lipoprotein release, permease component K02004 ABC.CD.P; putative ABC transport system permease protein
D RO1_05800 Predicted permease. K02004 ABC.CD.P; putative ABC transport system permease protein
D RO1_36520 Predicted permease. K02004 ABC.CD.P; putative ABC transport system permease protein
D RO1_18780 ABC-type antimicrobial peptide transport system, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D RO1_30460 ABC-type antimicrobial peptide transport system, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D RO1_26230 ABC-type antimicrobial peptide transport system, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D RO1_04840 ABC-type antimicrobial peptide transport system, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D RO1_05020 ABC-type antimicrobial peptide transport system, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D RO1_37650 ABC-type antimicrobial peptide transport system, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D RO1_05780 ABC-type antimicrobial peptide transport system, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D RO1_36510 ABC-type antimicrobial peptide transport system, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D RO1_25050 ABC-type transport system involved in Fe-S cluster assembly, ATPase component K09013 sufC; Fe-S cluster assembly ATP-binding protein
D RO1_30590 Di-and tricarboxylate transporters K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D RO1_29970 putative efflux protein, MATE family K26939 norM; MATE family, multidrug efflux pump
D RO1_01140 putative efflux protein, MATE family K26937 dinF; MATE family, multidrug efflux pump
D RO1_30090 putative efflux protein, MATE family K26937 dinF; MATE family, multidrug efflux pump
D RO1_02940 putative efflux protein, MATE family K26937 dinF; MATE family, multidrug efflux pump
D RO1_40080 putative efflux protein, MATE family K26937 dinF; MATE family, multidrug efflux pump
D RO1_13170 putative efflux protein, MATE family K26937 dinF; MATE family, multidrug efflux pump
D RO1_42110 putative efflux protein, MATE family K26937 dinF; MATE family, multidrug efflux pump
D RO1_19530 putative efflux protein, MATE family K26937 dinF; MATE family, multidrug efflux pump
D RO1_04630 putative efflux protein, MATE family K26937 dinF; MATE family, multidrug efflux pump
D RO1_29840 putative efflux protein, MATE family K26937 dinF; MATE family, multidrug efflux pump
D RO1_25590 putative efflux protein, MATE family K26937 dinF; MATE family, multidrug efflux pump
D RO1_21250 putative efflux protein, MATE family K26937 dinF; MATE family, multidrug efflux pump
D RO1_25250 putative efflux protein, MATE family K26937 dinF; MATE family, multidrug efflux pump
D RO1_05980 putative efflux protein, MATE family K26937 dinF; MATE family, multidrug efflux pump
D RO1_01010 putative efflux protein, MATE family K26937 dinF; MATE family, multidrug efflux pump
D RO1_11280 putative efflux protein, MATE family K26937 dinF; MATE family, multidrug efflux pump
D RO1_25230 putative efflux protein, MATE family K26937 dinF; MATE family, multidrug efflux pump
D RO1_30560 putative efflux protein, MATE family K26937 dinF; MATE family, multidrug efflux pump
D RO1_41640 putative efflux protein, MATE family K26937 dinF; MATE family, multidrug efflux pump
D RO1_31550 putative efflux protein, MATE family K26937 dinF; MATE family, multidrug efflux pump
D RO1_01490 Na+-driven multidrug efflux pump K26937 dinF; MATE family, multidrug efflux pump
D RO1_07360 putative efflux protein, MATE family K26937 dinF; MATE family, multidrug efflux pump
D RO1_08200 Fucose permease K08174 glcP; MFS transporter, FHS family, glucose/mannose:H+ symporter
D RO1_38460 Major Facilitator Superfamily. K26745 ydiM_N; MFS transporter, AAHS family, multidrug transporter
D RO1_00570 Permeases of the major facilitator superfamily K06902 UMF1; MFS transporter, UMF1 family
D RO1_31650 phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D RO1_07550 Phosphotransferase System HPr (HPr) Family K02784 ptsH; phosphocarrier protein HPr
D RO1_31640 Phosphotransferase System HPr (HPr) Family K02784 ptsH; phosphocarrier protein HPr
D RO1_34700 Phosphotransferase System HPr (HPr) Family K02784 ptsH; phosphocarrier protein HPr
D RO1_36660 Phosphotransferase System HPr (HPr) Family K02784 ptsH; phosphocarrier protein HPr
D RO1_07600 PTS system, glucose-like IIB component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D RO1_31630 PTS system D-fructose-specific IIA component (F1P-forming), Frc family (TC 4.A.2.1.4)/PTS system D-fructose-specific IIB component (F1P-forming), Frc family (TC 4.A.2.1.4)/PTS system D-fructose-specific IIC component (F1P-forming), Frc family (TC 4.A.2.1.4) K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D RO1_00780 MIP family channel proteins K02440 glpF; glycerol uptake facilitator
D RO1_24830 ammonium transporter K03320 amt; ammonium transporter, Amt family
D RO1_19580 Large-conductance mechanosensitive channel K03282 mscL; large conductance mechanosensitive channel
D RO1_05330 Small-conductance mechanosensitive channel K03442 mscS; small conductance mechanosensitive channel
D RO1_39910 Mg2+ transporter (mgtE) K06213 mgtE; magnesium transporter
D RO1_09440 Flagellar motor component K02556 motA; chemotaxis protein MotA
D RO1_02370 Mg2+ and Co2+ transporters K03284 corA; magnesium transporter
D RO1_36540 Mg2+ and Co2+ transporters K03284 corA; magnesium transporter
D RO1_42260 Hemolysins and related proteins containing CBS domains K03699 tlyC; magnesium and cobalt exporter, CNNM family
D RO1_34280 Putative effector of murein hydrolase LrgA K06518 cidA; holin-like protein
D RO1_10640 sugar (Glycoside-Pentoside-Hexuronide) transporter K11104 melB; melibiose permease
D RO1_39100 Predicted divalent heavy-metal cations transporter K07238 TC.ZIP; zinc transporter, ZIP family
D RO1_00700 K+-dependent Na+/Ca+ exchanger related-protein K07301 yrbG; cation:H+ antiporter
D RO1_14850 SSS sodium solute transporter superfamily K11928 putP; sodium/proline symporter
D RO1_34120 sodium--glutamate symport carrier (gltS) K03312 gltS; glutamate:Na+ symporter, ESS family
D RO1_39990 transporter, NhaC family (TC 2.A.35) K03315 nhaC; Na+:H+ antiporter, NhaC family
D RO1_08520 transporter, NhaC family (TC 2.A.35) K18218 tet35; tetracycline resistance efflux pump
D RO1_02350 Trk-type K+ transport systems, membrane components K03498 trkH; trk/ktr system potassium uptake protein
D RO1_20580 potassium uptake protein, TrkH family K03498 trkH; trk/ktr system potassium uptake protein
D RO1_02340 K+ transport systems, NAD-binding component K03499 trkA; trk/ktr system potassium uptake protein
D RO1_20570 K+ transport systems, NAD-binding component K03499 trkA; trk/ktr system potassium uptake protein
D RO1_38640 uracil-xanthine permease K02824 uraA; uracil permease
D RO1_10800 Chloride channel protein EriC K03281 clcA; chloride channel protein, CIC family
D RO1_42170 high affinity sulphate transporter 1 K03321 TC.SULP; sulfate permease, SulP family
D RO1_36170 Sulfate permease and related transporters (MFS superfamily) K03321 TC.SULP; sulfate permease, SulP family
D RO1_38490 TRAP-type C4-dicarboxylate transport system, small permease component K21394 yiaM; TRAP-type transport system small permease protein
D RO1_09760 Na/Pi-cotransporter K03324 yjbB; phosphate:Na+ symporter
D RO1_00650 Na/Pi-cotransporter K03324 yjbB; phosphate:Na+ symporter
D RO1_33500 Na/Pi-cotransporter K03324 yjbB; phosphate:Na+ symporter
D RO1_14700 Uncharacterized membrane protein, putative virulence factor K06409 spoVB; stage V sporulation protein B
D RO1_07410 Na+-driven multidrug efflux pump K06409 spoVB; stage V sporulation protein B
D RO1_17150 Predicted permeases K24180 mleP; malate permease and related proteins
D RO1_03910 Predicted branched-chain amino acid permease (azaleucine resistance) K26605 azlC; branched chain amino acid efflux pump
D RO1_03920 Predicted branched-chain amino acid permeases (azaleucine resistance) K26606 azlD; branched chain amino acid efflux pump
D RO1_38710 Predicted membrane protein K23675 fmnP; riboflavin transporter
D RO1_40050 Protein of unknown function (DUF1393). K23675 fmnP; riboflavin transporter
D RO1_41490 probable proton-coupled thiamine transporter YuaJ K16789 thiT; thiamine transporter
D RO1_11530 Bacterial cell division membrane protein K03588 ftsW; cell division protein FtsW
D RO1_37370 Predicted membrane protein K23242 mntP; manganese efflux pump family protein
D RO1_00690 Predicted membrane protein K23242 mntP; manganese efflux pump family protein
D RO1_15620 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D RO1_15610 Pyruvate/oxaloacetate carboxyltransferase K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D RO1_15650 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) K01604 mmdA; methylmalonyl-CoA decarboxylase subunit alpha [EC:7.2.4.3]
D RO1_15630 Biotin carboxyl carrier protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D RO1_15640 sodium pump decarboxylases, gamma subunit K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta
D RO1_17390 Membrane-fusion protein K24950 yknX; membrane fusion protein, antimicrobial resistance system
D RO1_08720 Fe2+ transport system protein A K04758 feoA; ferrous iron transport protein A
D RO1_08730 Fe2+ transport system protein A K04758 feoA; ferrous iron transport protein A
D RO1_08750 ferrous iron transporter FeoB K04759 feoB; ferrous iron transport protein B
D RO1_07370 ferrous iron transporter FeoB K04759 feoB; ferrous iron transport protein B
D RO1_18900 Uncharacterized membrane protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
C 02044 Secretion system [BR:rix02044]
D RO1_27760 Type II secretory pathway, component ExeA (predicted ATPase) K02450 gspA; general secretion pathway protein A
D RO1_01800 Flp pilus assembly protein, protease CpaA K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D RO1_32100 Type IV leader peptidase family. K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D RO1_43250 Flp pilus assembly protein, protease CpaA K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D RO1_32020 Type IV leader peptidase family. K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D RO1_32040 Flp pilus assembly protein, ATPase CpaF K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D RO1_32430 Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D RO1_04730 Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D RO1_32050 hypothetical protein K12510 tadB; tight adherence protein B
D RO1_32060 Bacterial type II secretion system protein F domain. K12511 tadC; tight adherence protein C
D RO1_06380 competence protein ComEA helix-hairpin-helix repeat region K02237 comEA; competence protein ComEA
D RO1_31430 Deoxycytidylate deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D RO1_06420 DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC
D RO1_22400 Predicted hydrolase (metallo-beta-lactamase superfamily) K02238 comEC; competence protein ComEC
D RO1_09550 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D RO1_23370 Uncharacterized homolog of the cytoplasmic domain of flagellar protein FhlB K04061 flhB2; flagellar biosynthesis protein
D RO1_09330 flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) K02409 fliF; flagellar M-ring protein FliF
D RO1_09360 type III secretion system ATPase, FliI/YscN K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D RO1_09480 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D RO1_09500 Flagellar biosynthesis protein, FliO. K02418 fliO; flagellar protein FliO/FliZ
D RO1_09510 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D RO1_09520 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D RO1_18350 Type IV secretory pathway, VirD4 components K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D RO1_42990 Type IV secretory pathway, VirD4 components K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D RO1_16010 Type IV secretory pathway, VirD4 components K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D RO1_18590 Domain of unknown function DUF87. K12053 comB4; ComB4 competence protein
D RO1_34460 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RO1_04040 protein translocase subunit secF/protein translocase subunit secD K12257 secDF; SecD/SecF fusion protein
D RO1_20180 protein translocase subunit secE/sec61 gamma K03073 secE; preprotein translocase subunit SecE
D RO1_02110 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY
D RO1_22820 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D RO1_22780 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D RO1_05190 protein translocase subunit yajC K03210 yajC; preprotein translocase subunit YajC
D RO1_24410 membrane protein insertase, YidC/Oxa1 family, C-terminal domain K03217 yidC; YidC/Oxa1 family membrane protein insertase
C 02042 Bacterial toxins [BR:rix02042]
D RO1_42260 Hemolysins and related proteins containing CBS domains K03699 tlyC; magnesium and cobalt exporter, CNNM family
D RO1_03980 channel protein, hemolysin III family K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:rix02022]
D RO1_00670 Signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D RO1_00660 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D RO1_15340 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07775 resD; two-component system, OmpR family, response regulator ResD
D RO1_18770 Signal transduction histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D RO1_32210 Signal transduction histidine kinase K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3]
D RO1_22280 His Kinase A (phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./HAMP domain. K18345 vanSB; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D RO1_28780 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K18349 vanRC; two-component system, OmpR family, response regulator VanR
D RO1_29680 His Kinase A (phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./HAMP domain. K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D RO1_10470 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02483 K02483; two-component system, OmpR family, response regulator
D RO1_33830 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02483 K02483; two-component system, OmpR family, response regulator
D RO1_24350 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./Histidine kinase. K07777 degS; two-component system, NarL family, sensor histidine kinase DegS [EC:2.7.13.3]
D RO1_12530 sporulation transcription factor Spo0A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A
D RO1_09610 Chemotaxis protein histidine kinase and related kinases K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RO1_09490 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RO1_15370 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RO1_09600 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RO1_22300 Chemotaxis signal transduction protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D RO1_22160 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./Histidine kinase./HAMP domain. K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D RO1_12830 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./Histidine kinase./HAMP domain. K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D RO1_08630 Predicted signal transduction protein with a C-terminal ATPase domain K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D RO1_23660 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./Histidine kinase./HAMP domain. K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D RO1_26310 Predicted signal transduction protein with a C-terminal ATPase domain K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D RO1_17790 Predicted signal transduction protein with a C-terminal ATPase domain K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D RO1_22170 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain K07720 yesN; two-component system, response regulator YesN
D RO1_08640 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain K07720 yesN; two-component system, response regulator YesN
D RO1_19070 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain K07720 yesN; two-component system, response regulator YesN
D RO1_10330 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain K07720 yesN; two-component system, response regulator YesN
D RO1_23650 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain K07720 yesN; two-component system, response regulator YesN
D RO1_26320 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain K07720 yesN; two-component system, response regulator YesN
D RO1_17780 two component transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN
D RO1_21490 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain K07720 yesN; two-component system, response regulator YesN
D RO1_13560 AraC-type DNA-binding domain-containing proteins K07720 yesN; two-component system, response regulator YesN
D RO1_08180 two component transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN
D RO1_41240 Signal transduction histidine kinase K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3]
C 02035 Bacterial motility proteins [BR:rix02035]
D RO1_09610 Chemotaxis protein histidine kinase and related kinases K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RO1_09620 Chemotaxis signal transduction protein K03408 cheW; purine-binding chemotaxis protein CheW
D RO1_09960 Chemotaxis signal transduction protein K03408 cheW; purine-binding chemotaxis protein CheW
D RO1_09630 Chemotaxis protein CheC, inhibitor of MCP methylation K03410 cheC; chemotaxis protein CheC
D RO1_09640 Chemotaxis protein; stimulates methylation of MCP proteins K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D RO1_15540 Methylase of chemotaxis methyl-accepting proteins K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D RO1_09600 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RO1_09490 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RO1_15370 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RO1_22300 Chemotaxis signal transduction protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D RO1_00110 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RO1_09970 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RO1_19270 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RO1_19330 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RO1_10970 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RO1_11240 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RO1_20390 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RO1_31110 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RO1_41250 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RO1_00930 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RO1_31780 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RO1_02440 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RO1_34060 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RO1_15410 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RO1_05680 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RO1_17350 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RO1_27010 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RO1_37240 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RO1_17900 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RO1_37930 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RO1_09360 type III secretion system ATPase, FliI/YscN K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D RO1_09370 flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ
D RO1_09500 Flagellar biosynthesis protein, FliO. K02418 fliO; flagellar protein FliO/FliZ
D RO1_09510 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D RO1_09520 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D RO1_09550 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D RO1_09340 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D RO1_09470 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D RO1_09480 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D RO1_09330 flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) K02409 fliF; flagellar M-ring protein FliF
D RO1_09320 flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D RO1_09390 Flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK
D RO1_09300 flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D RO1_09310 flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D RO1_09400 Flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D RO1_34550 fagellar hook-basal body proteins K02391 flgF; flagellar basal-body rod protein FlgF
D RO1_34560 fagellar hook-basal body proteins K02392 flgG; flagellar basal-body rod protein FlgG
D RO1_34570 hypothetical protein K02395 flgJ; peptidoglycan hydrolase FlgJ
D RO1_09420 fagellar hook-basal body proteins K02390 flgE; flagellar hook protein FlgE
D RO1_19630 flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D RO1_19640 flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D RO1_19650 flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL
D RO1_04650 hypothetical protein K18475 fliB; lysine-N-methylase [EC:2.1.1.-]
D RO1_01290 hypothetical protein K18475 fliB; lysine-N-methylase [EC:2.1.1.-]
D RO1_39180 hypothetical protein K18475 fliB; lysine-N-methylase [EC:2.1.1.-]
D RO1_31980 Flagellin and related hook-associated proteins K02406 fliC; flagellin
D RO1_19740 Flagellin and related hook-associated proteins K02406 fliC; flagellin
D RO1_01280 Flagellin and related hook-associated proteins K02406 fliC; flagellin
D RO1_19690 Flagellar capping protein K02407 fliD; flagellar hook-associated protein 2
D RO1_20160 hypothetical protein K02407 fliD; flagellar hook-associated protein 2
D RO1_19700 flagellar biosynthetic protein FliS K02422 fliS; flagellar secretion chaperone FliS
D RO1_09660 RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG K02405 fliA; RNA polymerase sigma factor FliA
D RO1_09440 Flagellar motor component K02556 motA; chemotaxis protein MotA
D RO1_41160 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain K02424 tcyA; L-cystine transport system substrate-binding protein
D RO1_19610 Anti-sigma-28 factor, FlgM. K02398 flgM; negative regulator of flagellin synthesis FlgM
D RO1_09430 Uncharacterized protein, possibly involved in motility K02385 flbD; flagellar protein FlbD
D RO1_09560 flagellar biosynthetic protein FlhF K02404 flhF; flagellar biosynthesis protein FlhF
D RO1_09580 ATPases involved in chromosome partitioning K04562 flhG; flagellar biosynthesis protein FlhG
D RO1_01800 Flp pilus assembly protein, protease CpaA K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D RO1_32100 Type IV leader peptidase family. K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D RO1_43250 Flp pilus assembly protein, protease CpaA K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D RO1_32020 Type IV leader peptidase family. K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D RO1_32040 Flp pilus assembly protein, ATPase CpaF K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D RO1_32430 Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D RO1_04730 Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:rix04812]
D RO1_34540 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D RO1_14600 Actin-like ATPase involved in cell morphogenesis K03569 mreB; rod shape-determining protein MreB and related proteins
D RO1_18200 plasmid segregation actin-type ATPase ParM K18640 parM; plasmid segregation protein ParM
D RO1_23840 StbA protein. K18640 parM; plasmid segregation protein ParM
D RO1_12690 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D RO1_12700 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D RO1_14550 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D RO1_12710 cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D RO1_14540 Septum formation topological specificity factor MinE. K03608 minE; cell division topological specificity factor
D RO1_42810 ATPases involved in chromosome partitioning K03496 parA; chromosome partitioning protein
D RO1_06520 CobQ/CobB/MinD/ParA nucleotide binding domain. K03496 parA; chromosome partitioning protein
D RO1_33020 ATPases involved in chromosome partitioning K03496 parA; chromosome partitioning protein
D RO1_35740 ATPases involved in chromosome partitioning K03496 parA; chromosome partitioning protein
D RO1_28660 ParB-like partition proteins K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RO1_29550 ParB-like partition proteins K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RO1_33030 ParB-like partition proteins K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RO1_35750 ParB-like partition proteins K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:rix04147]
D RO1_07880 Molecular chaperone, HSP90 family K04079 HSP90A; molecular chaperone HtpG
D RO1_35670 Molecular chaperone, HSP90 family K04079 HSP90A; molecular chaperone HtpG
D RO1_36490 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RO1_27160 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RO1_27430 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RO1_27440 3-phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D RO1_02930 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RO1_21630 Zn-dependent dipeptidase, microsomal dipeptidase homolog K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D RO1_09010 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RO1_05450 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D RO1_19460 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RO1_02560 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu
D RO1_32150 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D RO1_41870 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D RO1_12300 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D RO1_02100 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D RO1_12970 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D RO1_06310 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D RO1_12820 Alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
D RO1_26510 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D RO1_31890 alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D RO1_00770 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D RO1_05130 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RO1_24860 Uncharacterized protein related to glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RO1_05310 Phosphoglycerate dehydrogenase and related dehydrogenases K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D RO1_22650 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D RO1_16610 Electron transfer flavoprotein, alpha subunit K03522 fixB; electron transfer flavoprotein alpha subunit
D RO1_16940 Fructose-2,6-bisphosphatase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:rix02048]
D RO1_25820 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1
D RO1_25840 CRISPR-associated protein Cas2 K09951 cas2; CRISPR-associated protein Cas2
D RO1_25740 CRISPR-associated protein Cas6 K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-]
D RO1_25750 CRISPR-associated protein, Csm1 family K07016 csm1; CRISPR-associated protein Csm1
D RO1_25760 CRISPR-associated protein, Csm2 family K19138 csm2; CRISPR-associated protein Csm2
D RO1_25770 CRISPR-associated protein, Csm3 family K09002 csm3; CRISPR-associated protein Csm3
D RO1_25780 CRISPR-associated RAMP protein, Csm4 family K19139 csm4; CRISPR-associated protein Csm4
D RO1_37770 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D RO1_29450 Restriction endonuclease S subunits K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D RO1_29470 Restriction endonuclease S subunits K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D RO1_37760 Restriction endonuclease S subunits K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D RO1_29490 Type I restriction-modification system methyltransferase subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D RO1_37750 Type I restriction-modification system methyltransferase subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D RO1_42050 DNA-methyltransferase (dcm) K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RO1_01720 DNA-methyltransferase (dcm) K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RO1_23890 DNA-methyltransferase (dcm) K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RO1_23900 Site-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RO1_24320 Site-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RO1_02680 Restriction endonuclease K07448 mrr; restriction system protein
D RO1_40250 Predicted endonuclease distantly related to archaeal Holliday junction resolvase and Mrr-like restriction enzymes K07448 mrr; restriction system protein
D RO1_25520 Growth inhibitor K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D RO1_14980 Growth inhibitor K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D RO1_43160 Growth inhibitor K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D RO1_33280 addiction module toxin, RelE/StbE family K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-]
D RO1_33290 addiction module antitoxin, RelB/DinJ family K07473 dinJ; DNA-damage-inducible protein J
D RO1_04350 addiction module antitoxin, RelB/DinJ family K07473 dinJ; DNA-damage-inducible protein J
D RO1_18610 Plasmid stabilization system protein K19092 parE1_3_4; toxin ParE1/3/4
D RO1_39480 Plasmid stabilization system protein K19092 parE1_3_4; toxin ParE1/3/4
D RO1_24690 Plasmid stabilization system protein K19092 parE1_3_4; toxin ParE1/3/4
D RO1_01480 death-on-curing family protein K07341 doc; death on curing protein
D RO1_01470 Phd_YefM. K19165 phd; antitoxin Phd
D RO1_34540 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D RO1_14600 Actin-like ATPase involved in cell morphogenesis K03569 mreB; rod shape-determining protein MreB and related proteins
D RO1_01970 hypothetical protein K19167 abiQ; protein AbiQ
D RO1_42280 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RO1_07430 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:rix01504]
D RO1_03230 Streptomycin adenylyltransferase. K05593 aadK; aminoglycoside 6-adenylyltransferase [EC:2.7.7.-]
D RO1_08520 transporter, NhaC family (TC 2.A.35) K18218 tet35; tetracycline resistance efflux pump
D RO1_28600 small GTP-binding protein domain K18220 tetM; ribosomal protection tetracycline resistance protein
D RO1_39930 small GTP-binding protein domain K18220 tetM; ribosomal protection tetracycline resistance protein
D RO1_07990 Erythromycin esterase homolog K06880 ereA_B; erythromycin esterase [EC:3.1.1.-]
D RO1_20970 Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component K02172 blaR1; bla regulator protein blaR1
D RO1_20960 Predicted transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D RO1_22280 His Kinase A (phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./HAMP domain. K18345 vanSB; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D RO1_43140 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D RO1_28780 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K18349 vanRC; two-component system, OmpR family, response regulator VanR
D RO1_39060 Transcriptional regulators K18909 mepR; MarR family transcriptional regulator, repressor for mepA
D RO1_41670 MarR family. K18909 mepR; MarR family transcriptional regulator, repressor for mepA
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:rix00537]
D RO1_21630 Zn-dependent dipeptidase, microsomal dipeptidase homolog K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:rix03100]
D RO1_T_43590 RO1_T_43590 K14219 tRNA-Arg; tRNA Arg
D RO1_T_44030 RO1_T_44030 K14219 tRNA-Arg; tRNA Arg
D RO1_T_43470 RO1_T_43470 K14219 tRNA-Arg; tRNA Arg
D RO1_T_43620 RO1_T_43620 K14219 tRNA-Arg; tRNA Arg
D RO1_T_43720 RO1_T_43720 K14219 tRNA-Arg; tRNA Arg
D RO1_T_43740 RO1_T_43740 K14219 tRNA-Arg; tRNA Arg
D RO1_T_43410 RO1_T_43410 K14220 tRNA-Asn; tRNA Asn
D RO1_T_43520 RO1_T_43520 K14220 tRNA-Asn; tRNA Asn
D RO1_T_43980 RO1_T_43980 K14220 tRNA-Asn; tRNA Asn
D RO1_T_43560 RO1_T_43560 K14221 tRNA-Asp; tRNA Asp
D RO1_T_43840 RO1_T_43840 K14221 tRNA-Asp; tRNA Asp
D RO1_T_44000 RO1_T_44000 K14221 tRNA-Asp; tRNA Asp
D RO1_T_43430 RO1_T_43430 K14222 tRNA-Cys; tRNA Cys
D RO1_T_43440 RO1_T_43440 K14222 tRNA-Cys; tRNA Cys
D RO1_T_43490 RO1_T_43490 K14223 tRNA-Gln; tRNA Gln
D RO1_T_43640 RO1_T_43640 K14223 tRNA-Gln; tRNA Gln
D RO1_T_43420 RO1_T_43420 K14224 tRNA-Glu; tRNA Glu
D RO1_T_43990 RO1_T_43990 K14224 tRNA-Glu; tRNA Glu
D RO1_T_43530 RO1_T_43530 K14224 tRNA-Glu; tRNA Glu
D RO1_T_43610 RO1_T_43610 K14225 tRNA-Gly; tRNA Gly
D RO1_T_43710 RO1_T_43710 K14225 tRNA-Gly; tRNA Gly
D RO1_T_43950 RO1_T_43950 K14225 tRNA-Gly; tRNA Gly
D RO1_T_43960 RO1_T_43960 K14225 tRNA-Gly; tRNA Gly
D RO1_T_43940 RO1_T_43940 K14225 tRNA-Gly; tRNA Gly
D RO1_T_43920 RO1_T_43920 K14225 tRNA-Gly; tRNA Gly
D RO1_T_43630 RO1_T_43630 K14226 tRNA-His; tRNA His
D RO1_T_43510 RO1_T_43510 K14228 tRNA-Leu; tRNA Leu
D RO1_T_43580 RO1_T_43580 K14228 tRNA-Leu; tRNA Leu
D RO1_T_44020 RO1_T_44020 K14228 tRNA-Leu; tRNA Leu
D RO1_T_43790 RO1_T_43790 K14228 tRNA-Leu; tRNA Leu
D RO1_T_43660 RO1_T_43660 K14228 tRNA-Leu; tRNA Leu
D RO1_T_43820 RO1_T_43820 K14228 tRNA-Leu; tRNA Leu
D RO1_T_43830 RO1_T_43830 K14228 tRNA-Leu; tRNA Leu
D RO1_T_43730 RO1_T_43730 K14229 tRNA-Lys; tRNA Lys
D RO1_T_43750 RO1_T_43750 K14229 tRNA-Lys; tRNA Lys
D RO1_T_43650 RO1_T_43650 K14229 tRNA-Lys; tRNA Lys
D RO1_T_43900 RO1_T_43900 K14229 tRNA-Lys; tRNA Lys
D RO1_T_43770 RO1_T_43770 K14230 tRNA-Met; tRNA Met
D RO1_T_43550 RO1_T_43550 K14230 tRNA-Met; tRNA Met
D RO1_T_43680 RO1_T_43680 K14230 tRNA-Met; tRNA Met
D RO1_T_43760 RO1_T_43760 K14230 tRNA-Met; tRNA Met
D RO1_T_43880 RO1_T_43880 K14230 tRNA-Met; tRNA Met
D RO1_T_43700 RO1_T_43700 K14231 tRNA-Phe; tRNA Phe
D RO1_T_43890 RO1_T_43890 K14231 tRNA-Phe; tRNA Phe
D RO1_T_43450 RO1_T_43450 K14232 tRNA-Pro; tRNA Pro
D RO1_T_43600 RO1_T_43600 K14232 tRNA-Pro; tRNA Pro
D RO1_T_44040 RO1_T_44040 K14232 tRNA-Pro; tRNA Pro
D RO1_T_43930 RO1_T_43930 K14233 tRNA-Ser; tRNA Ser
D RO1_T_43970 RO1_T_43970 K14233 tRNA-Ser; tRNA Ser
D RO1_T_43800 RO1_T_43800 K14233 tRNA-Ser; tRNA Ser
D RO1_T_43810 RO1_T_43810 K14233 tRNA-Ser; tRNA Ser
D RO1_T_43540 RO1_T_43540 K14234 tRNA-Thr; tRNA Thr
D RO1_T_43860 RO1_T_43860 K14234 tRNA-Thr; tRNA Thr
D RO1_T_43480 RO1_T_43480 K14234 tRNA-Thr; tRNA Thr
D RO1_T_43690 RO1_T_43690 K14234 tRNA-Thr; tRNA Thr
D RO1_T_43500 RO1_T_43500 K14235 tRNA-Trp; tRNA Trp
D RO1_T_43780 RO1_T_43780 K14236 tRNA-Tyr; tRNA Tyr
D RO1_T_43870 RO1_T_43870 K14236 tRNA-Tyr; tRNA Tyr
D RO1_T_43570 RO1_T_43570 K14237 tRNA-Val; tRNA Val
D RO1_T_44010 RO1_T_44010 K14237 tRNA-Val; tRNA Val
D RO1_T_43670 RO1_T_43670 K14237 tRNA-Val; tRNA Val
D RO1_T_43850 RO1_T_43850 K14237 tRNA-Val; tRNA Val
D RO1_R_44060 16S; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RO1_R_44050 23S; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RO1_44100 Bacterial signal recognition particle RNA K01983 ffs; SRP RNA
D RO1_44070 Bacterial RNase P class A K01978 rnpB; M1 RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D RO1_13540 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00046 idnO; gluconate 5-dehydrogenase [EC:1.1.1.69]
D RO1_26670 Aldo/keto reductases, related to diketogulonate reductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D RO1_37080 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-]
D RO1_07870 Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family K19955 adh2; alcohol dehydrogenase [EC:1.1.1.-]
D RO1_29810 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) K23107 yajO; 1-deoxyxylulose-5-phosphate synthase [EC:1.1.-.-]
D RO1_14790 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3]
D RO1_11100 sulfide dehydrogenase (flavoprotein) subunit SudB K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D RO1_39160 anaerobic ribonucleoside-triphosphate reductase activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D RO1_38110 pyruvate formate-lyase 1-activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D RO1_04130 Uncharacterized Fe-S protein PflX, homolog of pyruvate formate lyase activating proteins K04070 pflX; putative pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D RO1_20290 Predicted N6-adenine-specific DNA methylase K07444 ypsC; putative N6-adenine-specific DNA methylase [EC:2.1.1.-]
D RO1_23580 Acetyltransferase (GNAT) family. K03826 yiaC; putative acetyltransferase [EC:2.3.1.-]
D RO1_33580 Acetyltransferases K03826 yiaC; putative acetyltransferase [EC:2.3.1.-]
D RO1_02380 Sortase and related acyltransferases K24217 mnaT; L-amino acid N-acyltransferase [EC:2.3.1.-]
D RO1_13220 conserved hypothetical protein TIGR02336 K15533 K15533; 1,3-beta-galactosyl-N-acetylhexosamine phosphorylase [EC:2.4.1.211]
D RO1_18090 Predicted glycosylase K16212 mgp; 4-O-beta-D-mannosyl-D-glucose phosphorylase [EC:2.4.1.281]
D RO1_41360 Predicted glycosylase K18785 mp2; beta-1,4-mannooligosaccharide/beta-1,4-mannosyl-N-acetylglucosamine phosphorylase [EC:2.4.1.319 2.4.1.320]
D RO1_18100 Predicted glycosylase K18785 mp2; beta-1,4-mannooligosaccharide/beta-1,4-mannosyl-N-acetylglucosamine phosphorylase [EC:2.4.1.319 2.4.1.320]
D RO1_39780 Predicted glycosylase K18785 mp2; beta-1,4-mannooligosaccharide/beta-1,4-mannosyl-N-acetylglucosamine phosphorylase [EC:2.4.1.319 2.4.1.320]
D RO1_07060 Cellobiose phosphorylase K25764 E2.4.1.388; glucosylgalactose phosphorylase [EC:2.4.1.388]
D RO1_10600 NCAIR mutase (PurE)-related proteins K06898 larB; pyridinium-3,5-biscarboxylic acid mononucleotide synthase [EC:2.5.1.143]
D RO1_30840 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D RO1_13280 Membrane-associated lipoprotein involved in thiamine biosynthesis K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D RO1_17610 Uncharacterized conserved protein K23753 ppk2; AMP-polyphosphate phosphotransferase [EC:2.7.4.33]
D RO1_37670 Retron-type reverse transcriptase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D RO1_03110 anti-sigma F factor K06379 spoIIAB; stage II sporulation protein AB (anti-sigma F factor) [EC:2.7.11.1]
D RO1_24940 Hpr(Ser) kinase/phosphatase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-]
D RO1_33770 Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106]
D RO1_30070 Predicted esterase K03930 estA; putative tributyrin esterase [EC:3.1.1.-]
D RO1_30080 Predicted esterase K03930 estA; putative tributyrin esterase [EC:3.1.1.-]
D RO1_39090 Thioesterase superfamily K18700 flK; fluoroacetyl-CoA thioesterase [EC:3.1.2.29]
D RO1_22550 conserved hypothetical protein TIGR00051 K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D RO1_37100 Stage II sporulation protein E (SpoIIE). K06382 spoIIE; stage II sporulation protein E [EC:3.1.3.16]
D RO1_09950 Predicted metal-dependent phosphoesterases (PHP family) K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D RO1_39550 HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 K07015 yqeG; putative phosphatase [EC:3.1.3.-]
D RO1_31310 Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain K22927 gdpP; cyclic-di-AMP phosphodiesterase [EC:3.1.4.59]
D RO1_42340 Response regulator containing a CheY-like receiver domain and an HD-GYP domain K07814 K07814; cyclic di-GMP phosphodiesterase [EC:3.1.4.-]
D RO1_00340 Alkyl sulfatase and related hydrolases K25227 sdsA1; linear primary-alkylsulfatase [EC:3.1.6.21]
D RO1_00900 hydrolase, TatD family K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D RO1_31190 Listeria/Bacterioides repeat K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8]
D RO1_26490 Arabinogalactan endo-1,4-beta-galactosidase K01224 E3.2.1.89; arabinogalactan endo-1,4-beta-galactosidase [EC:3.2.1.89]
D RO1_38020 Beta-xylosidase K06113 abnA; arabinan endo-1,5-alpha-L-arabinosidase [EC:3.2.1.99]
D RO1_26360 Endoglucanase Y K15531 rexA; oligosaccharide reducing-end xylanase [EC:3.2.1.156]
D RO1_13740 Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins K15532 yteR; unsaturated rhamnogalacturonyl hydrolase [EC:3.2.1.172]
D RO1_10340 Alpha-glucosidases, family 31 of glycosyl hydrolases K01811 xylS; alpha-D-xyloside xylohydrolase [EC:3.2.1.177]
D RO1_07710 Alpha-glucosidases, family 31 of glycosyl hydrolases K01811 xylS; alpha-D-xyloside xylohydrolase [EC:3.2.1.177]
D RO1_22000 Glycosyl Hydrolase Family 88. K18581 ugl; unsaturated chondroitin disaccharide hydrolase [EC:3.2.1.180]
D RO1_04400 Protein of unknown function (DUF2961). K27494 exoMA1; D-arabinan exo alpha-(1,3)/(1,5)-arabinofuranosidase (non-reducing end) [EC:3.2.1.225]
D RO1_39200 N-acetylmuramoyl-L-alanine amidase K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D RO1_39380 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D RO1_21380 Predicted xylanase/chitin deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D RO1_09780 Predicted xylanase/chitin deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D RO1_07380 Predicted xylanase/chitin deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D RO1_05060 delta-lactam-biosynthetic de-N-acetylase K01567 pdaA; peptidoglycan-N-acetylmuramic acid deacetylase [EC:3.5.1.-]
D RO1_16220 endoribonuclease L-PSP K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D RO1_39980 endoribonuclease L-PSP, putative K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D RO1_31410 Protein-tyrosine-phosphatase K20201 ywlE; protein arginine phosphatase [EC:3.9.1.2]
D RO1_38380 Myosin-crossreactive antigen K10254 ohyA; oleate hydratase [EC:4.2.1.53]
D RO1_15000 yjeF C-terminal region, hydroxyethylthiazole kinase-related/yjeF N-terminal region K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D RO1_19180 conserved hypothetical protein TIGR00268 K06864 larE; pyridinium-3,5-biscarboxylic acid mononucleotide sulfurtransferase [EC:4.4.1.37]
D RO1_10590 conserved hypothetical protein TIGR00299 K09121 larC; pyridinium-3,5-bisthiocarboxylic acid mononucleotide nickel chelatase [EC:4.99.1.12]
D RO1_18080 N-acyl-D-glucosamine 2-epimerase K16213 cbe; cellobiose epimerase [EC:5.1.3.11]
D RO1_41840 acetyl-CoA carboxylase carboxyltransferase subunit alpha K04104 accD3; acyl-CoA carboxylase subunit beta [EC:6.4.1.-]
D RO1_15490 electron transport complex, RnfABCDGE type, C subunit K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2]
D RO1_15430 electron transport complex, RnfABCDGE type, B subunit K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D RO1_37260 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D RO1_36420 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D RO1_08910 heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
D RO1_11120 ATPase, P-type (transporting), HAD superfamily, subfamily IC K12952 ctpE; cation-transporting P-type ATPase E [EC:7.2.2.-]
C 99981 Carbohydrate metabolism
D RO1_24890 Phosphotransferase System HPr (HPr) Family K11184 chr; catabolite repression HPr-like protein
C 99982 Energy metabolism
D RO1_15460 electron transport complex, RnfABCDGE type, G subunit K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G
D RO1_15450 electron transport complex, RnfABCDGE type, E subunit K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E
D RO1_15440 electron transport complex, RnfABCDGE type, A subunit K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A
D RO1_42290 FeS cluster assembly scaffold protein NifU, Clostridium type K04488 iscU; nitrogen fixation protein NifU and related proteins
D RO1_16600 Electron transfer flavoprotein, beta subunit K03521 fixA; electron transfer flavoprotein beta subunit
C 99983 Lipid metabolism
D RO1_11270 EDD domain protein, DegV family K25232 fakB; fatty acid kinase fatty acid binding subunit
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D RO1_14460 pyridoxal phosphate enzyme, YggS family K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D RO1_11830 conserved hypothetical protein K07027 K07027; glycosyltransferase 2 family protein
D RO1_32890 Uncharacterised protein family (UPF0104). K07027 K07027; glycosyltransferase 2 family protein
D RO1_08450 Cell Wall Hydrolase. K01449 cwlJ; cell wall hydrolase
C 99987 Cofactor metabolism
C 99988 Secondary metabolism
C 99999 Others
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D RO1_27060 cold-shock DNA-binding protein family K03704 cspA; cold shock protein
D RO1_05340 cold-shock DNA-binding protein family K03704 cspA; cold shock protein
D RO1_40740 Phage anti-repressor protein K07741 antB; anti-repressor protein
D RO1_31010 nitrogen regulatory protein P-II K02589 nifHD1; nitrogen regulatory protein PII 1
D RO1_31020 Nitrogen regulatory protein PII K02590 nifHD2; nitrogen regulatory protein PII 2
D RO1_38680 Transcriptional accessory protein K06959 tex; protein Tex
D RO1_13920 Uncharacterized protein conserved in bacteria K09777 remA; extracellular matrix regulatory protein A
C 99974 Translation
D RO1_11580 Predicted exonuclease of the beta-lactamase fold involved in RNA processing K07576 K07576; metallo-beta-lactamase family protein
C 99975 Protein processing
D RO1_02870 trigger factor K03545 tig; trigger factor
D RO1_03960 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) K03545 tig; trigger factor
D RO1_27200 SsrA-binding protein K03664 smpB; SsrA-binding protein
D RO1_37440 Hydrogenase maturation factor K04655 hypE; hydrogenase expression/formation protein HypE
D RO1_42600 Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family K07402 xdhC; xanthine dehydrogenase accessory factor
D RO1_31960 Negative regulator of genetic competence, sporulation and motility K16511 mecA1_2; adapter protein MecA 1/2
D RO1_17490 Negative regulator of genetic competence, sporulation and motility K16511 mecA1_2; adapter protein MecA 1/2
C 99976 Replication and repair
D RO1_42180 O-6-methylguanine DNA methyltransferase K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein
D RO1_29170 DNA repair proteins K03630 radC; DNA repair protein RadC
D RO1_14610 DNA replication and repair protein RadC K03630 radC; DNA repair protein RadC
D RO1_16780 hypothetical protein K07459 ybjD; putative ATP-dependent endonuclease of the OLD family
D RO1_32720 Putative phage replication protein RstA K07467 nicK; putative DNA relaxase
D RO1_21130 ATPase related to the helicase subunit of the Holliday junction resolvase K07478 ycaJ; putative ATPase
D RO1_24740 phage/plasmid primase, P4 family, C-terminal domain K06919 K06919; putative DNA primase/helicase
D RO1_25290 Transposase and inactivated derivatives, IS5 family K07481 K07481; transposase, IS5 family
D RO1_00130 Transposase and inactivated derivatives, IS30 family K07482 K07482; transposase, IS30 family
D RO1_18520 Transposase. K07483 K07483; transposase
D RO1_35690 hypothetical protein K07483 K07483; transposase
D RO1_27740 Transposase and inactivated derivatives K07484 K07484; transposase
D RO1_27750 Transposase and inactivated derivatives K07484 K07484; transposase
D RO1_27960 Transposase. K07486 K07486; transposase
D RO1_06850 Transposase and inactivated derivatives K07491 rayT; REP-associated tyrosine transposase
D RO1_18530 Transposase and inactivated derivatives K07497 K07497; putative transposase
D RO1_27770 Mu transposase, C-terminal./Integrase core domain. K07497 K07497; putative transposase
D RO1_35680 Transposase and inactivated derivatives K07497 K07497; putative transposase
D RO1_18370 Site-specific recombinase XerD K14059 int; integrase
D RO1_04750 Site-specific recombinase XerD K14059 int; integrase
C 99979 Viral proteins
C 99998 Others
D RO1_01240 conserved hypothetical protein TIGR00103 K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D RO1_21940 sugar (Glycoside-Pentoside-Hexuronide) transporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family
D RO1_28120 hypothetical protein K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family
D RO1_18720 sugar (Glycoside-Pentoside-Hexuronide) transporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family
D RO1_34340 sugar (Glycoside-Pentoside-Hexuronide) transporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family
D RO1_07070 Na+/melibiose symporter and related transporters K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family
D RO1_26840 sugar (Glycoside-Pentoside-Hexuronide) transporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family
D RO1_35920 sugar (Glycoside-Pentoside-Hexuronide) transporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family
D RO1_19290 Na+-dependent transporters of the SNF family K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D RO1_05960 Na+-dependent transporters of the SNF family K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D RO1_19280 amino acid carrier protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D RO1_26940 amino acid carrier protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D RO1_38030 amino acid carrier protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
C 99978 Cell growth
D RO1_19780 hypothetical protein K06320 cgeB; spore maturation protein CgeB
D RO1_19810 hypothetical protein K06320 cgeB; spore maturation protein CgeB
D RO1_19830 hypothetical protein K06320 cgeB; spore maturation protein CgeB
D RO1_20150 Uncharacterized protein conserved in bacteria K06320 cgeB; spore maturation protein CgeB
D RO1_09110 hypothetical protein K06333 cotJB; spore coat protein JB
D RO1_09100 Mn-containing catalase K06334 cotJC; spore coat protein JC
D RO1_24400 Predicted RNA-binding protein K06346 jag; spoIIIJ-associated protein
D RO1_31080 Uncharacterized membrane protein, required for spore maturation in B.subtilis. K06373 spmA; spore maturation protein A
D RO1_31100 Uncharacterized membrane protein K06374 spmB; spore maturation protein B
D RO1_03090 anti-anti-sigma factor K06378 spoIIAA; stage II sporulation protein AA (anti-sigma F factor antagonist)
D RO1_06460 stage II sporulation protein P K06385 spoIIP; stage II sporulation protein P
D RO1_21210 stage II sporulation protein R K06387 spoIIR; stage II sporulation protein R
D RO1_12020 stage III sporulation protein AA K06390 spoIIIAA; stage III sporulation protein AA
D RO1_12040 stage III sporulation protein AC K06392 spoIIIAC; stage III sporulation protein AC
D RO1_12050 Stage III sporulation protein AC/AD protein family. K06393 spoIIIAD; stage III sporulation protein AD
D RO1_12060 Stage III sporulation protein AE (spore_III_AE). K06394 spoIIIAE; stage III sporulation protein AE
D RO1_12080 hypothetical protein K06396 spoIIIAG; stage III sporulation protein AG
D RO1_10880 stage IV sporulation protein A K06398 spoIVA; stage IV sporulation protein A
D RO1_28690 Site-specific recombinases, DNA invertase Pin homologs K06400 spoIVCA; site-specific DNA recombinase
D RO1_40190 Site-specific recombinases, DNA invertase Pin homologs K06400 spoIVCA; site-specific DNA recombinase
D RO1_02640 Site-specific recombinases, DNA invertase Pin homologs K06400 spoIVCA; site-specific DNA recombinase
D RO1_33120 Site-specific recombinases, DNA invertase Pin homologs K06400 spoIVCA; site-specific DNA recombinase
D RO1_43180 Site-specific recombinases, DNA invertase Pin homologs K06400 spoIVCA; site-specific DNA recombinase
D RO1_03310 Site-specific recombinases, DNA invertase Pin homologs K06400 spoIVCA; site-specific DNA recombinase
D RO1_33460 Site-specific recombinases, DNA invertase Pin homologs K06400 spoIVCA; site-specific DNA recombinase
D RO1_33690 Site-specific recombinases, DNA invertase Pin homologs K06400 spoIVCA; site-specific DNA recombinase
D RO1_04210 Site-specific recombinases, DNA invertase Pin homologs K06400 spoIVCA; site-specific DNA recombinase
D RO1_04220 Site-specific recombinases, DNA invertase Pin homologs K06400 spoIVCA; site-specific DNA recombinase
D RO1_04240 Site-specific recombinases, DNA invertase Pin homologs K06400 spoIVCA; site-specific DNA recombinase
D RO1_04530 Site-specific recombinases, DNA invertase Pin homologs K06400 spoIVCA; site-specific DNA recombinase
D RO1_15730 Site-specific recombinases, DNA invertase Pin homologs K06400 spoIVCA; site-specific DNA recombinase
D RO1_15740 Site-specific recombinases, DNA invertase Pin homologs K06400 spoIVCA; site-specific DNA recombinase
D RO1_15750 Site-specific recombinases, DNA invertase Pin homologs K06400 spoIVCA; site-specific DNA recombinase
D RO1_25540 Site-specific recombinases, DNA invertase Pin homologs K06400 spoIVCA; site-specific DNA recombinase
D RO1_25550 Site-specific recombinases, DNA invertase Pin homologs K06400 spoIVCA; site-specific DNA recombinase
D RO1_25560 Site-specific recombinases, DNA invertase Pin homologs K06400 spoIVCA; site-specific DNA recombinase
D RO1_07310 Site-specific recombinases, DNA invertase Pin homologs K06400 spoIVCA; site-specific DNA recombinase
D RO1_07320 Site-specific recombinases, DNA invertase Pin homologs K06400 spoIVCA; site-specific DNA recombinase
D RO1_07330 Site-specific recombinases, DNA invertase Pin homologs K06400 spoIVCA; site-specific DNA recombinase
D RO1_16790 Site-specific recombinases, DNA invertase Pin homologs K06400 spoIVCA; site-specific DNA recombinase
D RO1_35620 Recombinase. K06400 spoIVCA; site-specific DNA recombinase
D RO1_26060 Stage V sporulation protein AA. K06403 spoVAA; stage V sporulation protein AA
D RO1_26070 hypothetical protein K06404 spoVAB; stage V sporulation protein AB
D RO1_26090 SpoVA protein. K06405 spoVAC; stage V sporulation protein AC
D RO1_17280 stage V sporulation protein AD K06406 spoVAD; stage V sporulation protein AD
D RO1_17290 stage V sporulation protein AE K06407 spoVAE; stage V sporulation protein AE
D RO1_34430 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain. K06410 spoVFA; dipicolinate synthase subunit A
D RO1_34440 dipicolinic acid synthetase, B subunit K06411 spoVFB; dipicolinate synthase subunit B
D RO1_36750 Uncharacterized protein, involved in the regulation of septum location K06412 spoVG; stage V sporulation protein G
D RO1_43380 Uncharacterized protein, involved in the regulation of septum location K06412 spoVG; stage V sporulation protein G
D RO1_20660 Small, acid-soluble spore proteins, alpha/beta type. K06421 sspD; small acid-soluble spore protein D (minor alpha/beta-type SASP)
D RO1_13730 Small, acid-soluble spore proteins, alpha/beta type. K06421 sspD; small acid-soluble spore protein D (minor alpha/beta-type SASP)
D RO1_14740 Putative stage IV sporulation protein YqfD. K06438 yqfD; similar to stage IV sporulation protein
D RO1_06410 Sporulation and spore germination. K06298 gerM; germination protein M
D RO1_21180 Bacillus/Clostridium GerA spore germination protein. K06310 yndD; spore germination protein
C 99993 Cell motility
C 99995 Signaling proteins
D RO1_36400 Uncharacterized proteins involved in stress response, homologs of TerZ and putative cAMP-binding protein CABP1 K05795 terD; tellurium resistance protein TerD
D RO1_36450 Uncharacterized proteins involved in stress response, homologs of TerZ and putative cAMP-binding protein CABP1 K05795 terD; tellurium resistance protein TerD
D RO1_16290 Carbon starvation protein, predicted membrane protein K06200 cstA; carbon starvation protein
D RO1_05530 GTP-binding protein TypA/BipA K06207 typA; GTP-binding protein
D RO1_22610 ACT domain-containing protein K07166 K07166; ACT domain-containing protein
D RO1_14730 Phosphate starvation-inducible protein PhoH, predicted ATPase K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
C 99992 Structural proteins
D RO1_26200 RND family efflux transporter, MFP subunit K02005 ABC.CD.TX; HlyD family secretion protein
D RO1_05010 RND family efflux transporter, MFP subunit K02005 ABC.CD.TX; HlyD family secretion protein
C 99994 Others
D RO1_00640 phosphate uptake regulator, PhoU K02039 phoU; phosphate transport system protein
D RO1_11050 hemerythrin-like metal-binding domain K07216 hr; hemerythrin
B
B 09194 Poorly characterized
C 99996 General function prediction only
D RO1_33080 EMAP domain K06878 K06878; tRNA-binding protein
D RO1_11310 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED K07025 K07025; putative hydrolase of the HAD superfamily
D RO1_32250 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED K07025 K07025; putative hydrolase of the HAD superfamily
D RO1_03140 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E K07025 K07025; putative hydrolase of the HAD superfamily
D RO1_15250 Predicted membrane protein K07058 K07058; membrane protein
D RO1_25950 Uncharacterized conserved protein K03744 lemA; LemA protein
D RO1_13100 YhgE/Pip N-terminal domain/YhgE/Pip C-terminal domain K01421 yhgE; putative membrane protein
D RO1_13120 YhgE/Pip N-terminal domain/YhgE/Pip C-terminal domain K01421 yhgE; putative membrane protein
D RO1_09770 Predicted membrane protein K08974 K08974; putative membrane protein
C 99997 Function unknown
D RO1_16440 Beta-propeller domains of methanol dehydrogenase type K06872 K06872; uncharacterized protein
D RO1_09910 Predicted ATPase (AAA+ superfamily) K06923 K06923; uncharacterized protein
D RO1_16720 Predicted ATPases K06926 K06926; uncharacterized protein
D RO1_25870 hypothetical protein K06926 K06926; uncharacterized protein
D RO1_34270 Uncharacterised protein family (UPF0153). K06940 K06940; uncharacterized protein
D RO1_39030 Predicted HD superfamily hydrolase K06950 K06950; uncharacterized protein
D RO1_22850 RNA-binding protein (KH domain) K06960 K06960; uncharacterized protein
D RO1_39400 Predicted Zn-dependent protease K06973 K06973; uncharacterized protein
D RO1_37350 Predicted exporters of the RND superfamily K07003 K07003; uncharacterized protein
D RO1_12920 Predicted flavin-nucleotide-binding protein K07005 K07005; uncharacterized protein
D RO1_25890 Predicted membrane protein, putative toxin regulator K07035 K07035; uncharacterized protein
D RO1_11400 Predicted metal-binding protein related to the C-terminal domain of SecA K07039 K07039; uncharacterized protein
D RO1_20560 Predicted oxidoreductases of the aldo/keto reductase family K07079 K07079; uncharacterized protein
D RO1_17220 Predicted oxidoreductases of the aldo/keto reductase family K07079 K07079; uncharacterized protein
D RO1_19150 Predicted oxidoreductases of the aldo/keto reductase family K07079 K07079; uncharacterized protein
D RO1_34110 TRAP transporter solute receptor, TAXI family K07080 K07080; uncharacterized protein
D RO1_08100 Predicted permeases K07090 K07090; uncharacterized protein
D RO1_41220 hypothetical protein K07090 K07090; uncharacterized protein
D RO1_20330 phosphoesterase, MJ0936 family K07095 K07095; uncharacterized protein
D RO1_38080 phosphoesterase, MJ0936 family K07095 K07095; uncharacterized protein
D RO1_13900 Predicted small molecule binding protein (contains 3H domain) K07105 K07105; uncharacterized protein
D RO1_08860 Short-chain dehydrogenases of various substrate specificities K07124 K07124; uncharacterized protein
D RO1_23990 Sel1 repeat. K07126 K07126; uncharacterized protein
D RO1_24000 FOG: TPR repeat, SEL1 subfamily K07126 K07126; uncharacterized protein
D RO1_16040 Sel1 repeat. K07126 K07126; uncharacterized protein
D RO1_18150 Predicted ATPase (AAA+ superfamily) K07133 K07133; uncharacterized protein
D RO1_10290 Predicted ATPase (AAA+ superfamily) K07133 K07133; uncharacterized protein
D RO1_30400 Predicted ATPase (AAA+ superfamily) K07133 K07133; uncharacterized protein
D RO1_31380 Predicted ATPase (AAA+ superfamily) K07133 K07133; uncharacterized protein
D RO1_06200 Predicted ATPase (AAA+ superfamily) K07133 K07133; uncharacterized protein
D RO1_04610 Uncharacterized FAD-dependent dehydrogenases K07137 K07137; uncharacterized protein
D RO1_14670 Uncharacterized FAD-dependent dehydrogenases K07137 K07137; uncharacterized protein
D RO1_23770 radical SAM protein, TIGR01212 family K07139 K07139; uncharacterized protein
D RO1_19570 hypothetical protein K07149 K07149; uncharacterized protein
D RO1_10890 Predicted membrane protein K07149 K07149; uncharacterized protein
D RO1_38230 Uncharacterized conserved protein K09117 K09117; uncharacterized protein
D RO1_22620 Uncharacterized conserved protein K09157 K09157; uncharacterized protein
D RO1_41610 Uncharacterized conserved protein K09702 K09702; uncharacterized protein
D RO1_41290 Uncharacterized conserved protein K09704 K09704; uncharacterized protein
D RO1_10790 Uncharacterized conserved protein K09706 K09706; uncharacterized protein
D RO1_03060 Predicted polymerase, most proteins contain PALM domain, HD hydrolase domain and Zn-ribbon domain K09749 K09749; uncharacterized protein
D RO1_06220 Uncharacterized protein conserved in bacteria K09766 K09766; uncharacterized protein
D RO1_28520 Uncharacterized protein conserved in bacteria K09768 K09768; uncharacterized protein
D RO1_33750 Uncharacterized protein conserved in bacteria K09768 K09768; uncharacterized protein
D RO1_14480 Uncharacterized conserved protein K09779 K09779; uncharacterized protein
D RO1_32570 Uncharacterized protein conserved in bacteria K09803 K09803; uncharacterized protein
D RO1_16210 Uncharacterized protein conserved in bacteria K00243 K00243; uncharacterized protein
D RO1_22240 Uncharacterized protein conserved in bacteria K09955 K09955; uncharacterized protein
D RO1_38290 Uncharacterized protein conserved in bacteria K09955 K09955; uncharacterized protein
D RO1_30960 urea carboxylase-associated protein 2 K09967 K09967; uncharacterized protein
D RO1_30970 urea carboxylase-associated protein 1 K09967 K09967; uncharacterized protein
D RO1_15500 DNA polymerase family B, exonuclease domain. K07502 yprB; uncharacterized protein
D RO1_14240 Predicted ribosomal protein K07584 ysxB; uncharacterized protein
D RO1_10130 Predicted nucleic-acid-binding protein implicated in transcription termination K07742 ylxR; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: September 18, 2024