+D GENES KO #

  KEGG Orthology (KO) - Ruminococcus lactaris

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A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:rlr00010] D NQ541_08205 ROK family glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D NQ541_00355 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D NQ541_10985 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D NQ541_11260 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D NQ541_00145 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D NQ541_03060 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D NQ541_01340 fba; class II fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D NQ541_07235 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D NQ541_07245 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D NQ541_07240 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D NQ541_07195 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D NQ541_04255 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D NQ541_03925 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D NQ541_02480 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D NQ541_09645 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D NQ541_04165 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D NQ541_11220 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D NQ541_02100 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D NQ541_03380 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D NQ541_07105 galactose mutarotase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D NQ541_11040 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D NQ541_03695 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D NQ541_11420 glucose PTS transporter subunit IIA K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199] C 00020 Citrate cycle (TCA cycle) [PATH:rlr00020] D NQ541_01255 citrate/2-methylcitrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D NQ541_11740 citrate/2-methylcitrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D NQ541_00870 hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D NQ541_06770 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D NQ541_00280 FAD-binding protein K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D NQ541_00285 2Fe-2S iron-sulfur cluster-binding protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D NQ541_12380 fumarate hydratase K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2] D NQ541_12375 Fe-S-containing hydro-lyase K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2] D NQ541_03695 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D NQ541_09645 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] C 00030 Pentose phosphate pathway [PATH:rlr00030] D NQ541_00355 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D NQ541_09770 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D NQ541_00170 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D NQ541_00175 transketolase family protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D NQ541_00165 fsa; fructose-6-phosphate aldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D NQ541_10560 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D NQ541_07205 rbsK; ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15] D NQ541_11040 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D NQ541_07075 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D NQ541_10790 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D NQ541_01340 fba; class II fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D NQ541_10985 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D NQ541_11260 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D NQ541_00145 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D NQ541_03060 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] C 00040 Pentose and glucuronate interconversions [PATH:rlr00040] D NQ541_12815 mannitol dehydrogenase family protein K00040 uxuB; fructuronate reductase [EC:1.1.1.57] D NQ541_09770 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D NQ541_00570 alcohol dehydrogenase catalytic domain-containing protein K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14] C 00051 Fructose and mannose metabolism [PATH:rlr00051] D NQ541_00585 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D NQ541_10985 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D NQ541_11260 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D NQ541_00145 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D NQ541_03060 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D NQ541_04455 pfkB; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] D NQ541_00570 alcohol dehydrogenase catalytic domain-containing protein K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14] D NQ541_01340 fba; class II fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D NQ541_07235 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D NQ541_10560 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D NQ541_04460 fructose-specific PTS transporter subunit EIIC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D NQ541_08950 PTS N-acetylglucosamine transporter subunit IIBC K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D NQ541_08960 PTS sugar transporter subunit IIC K02795 manY; mannose PTS system EIIC component D NQ541_08955 PTS system mannose/fructose/sorbose family transporter subunit IID K02796 manZ; mannose PTS system EIID component C 00052 Galactose metabolism [PATH:rlr00052] D NQ541_07105 galactose mutarotase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D NQ541_04295 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D NQ541_04290 galT; UDP-glucose--hexose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] D NQ541_04275 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D NQ541_11040 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D NQ541_08205 ROK family glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D NQ541_08655 DUF4981 domain-containing protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D NQ541_03735 beta-galactosidase K12308 bgaB; beta-galactosidase [EC:3.2.1.23] D NQ541_09515 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D NQ541_10985 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D NQ541_11260 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D NQ541_00145 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D NQ541_03060 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D NQ541_08945 alpha-glucosidase K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10] C 00053 Ascorbate and aldarate metabolism D NQ541_03380 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00500 Starch and sucrose metabolism [PATH:rlr00500] D NQ541_10765 glgD; glucose-1-phosphate adenylyltransferase subunit GlgD K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D NQ541_10770 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D NQ541_11840 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D NQ541_11845 glgD; glucose-1-phosphate adenylyltransferase subunit GlgD K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D NQ541_05175 glgA; glycogen synthase GlgA K00703 glgA; starch synthase [EC:2.4.1.21] D NQ541_00910 glgB; 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D NQ541_03455 glgP; glycogen/starch/alpha-glucan family phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D NQ541_12460 glycogen/starch/alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D NQ541_10335 alpha-amylase family glycosyl hydrolase K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135] D NQ541_08945 alpha-glucosidase K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10] D NQ541_03460 malQ; 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25] D NQ541_04105 alpha-amylase family glycosyl hydrolase K01214 ISA; isoamylase [EC:3.2.1.68] D NQ541_11040 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D NQ541_08205 ROK family glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D NQ541_00355 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D NQ541_00585 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:rlr00520] D NQ541_09895 nagE; N-acetylglucosamine-specific PTS transporter subunit IIBC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193] D NQ541_09050 nagA; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25] D NQ541_09910 nagB; glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6] D NQ541_00585 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D NQ541_02780 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D NQ541_01280 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D NQ541_07090 UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D NQ541_11815 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D NQ541_01310 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D NQ541_07610 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D NQ541_11420 glucose PTS transporter subunit IIA K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199] D NQ541_08205 ROK family glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D NQ541_11040 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D NQ541_04295 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D NQ541_04290 galT; UDP-glucose--hexose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] D NQ541_04275 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D NQ541_09515 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D NQ541_08950 PTS N-acetylglucosamine transporter subunit IIBC K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D NQ541_08960 PTS sugar transporter subunit IIC K02795 manY; mannose PTS system EIIC component D NQ541_08955 PTS system mannose/fructose/sorbose family transporter subunit IID K02796 manZ; mannose PTS system EIID component D NQ541_00355 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D NQ541_10765 glgD; glucose-1-phosphate adenylyltransferase subunit GlgD K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D NQ541_10770 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D NQ541_11840 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D NQ541_11845 glgD; glucose-1-phosphate adenylyltransferase subunit GlgD K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] C 00620 Pyruvate metabolism [PATH:rlr00620] D NQ541_09645 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D NQ541_03210 pflB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D NQ541_02100 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D NQ541_06750 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D NQ541_06755 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D NQ541_03925 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D NQ541_01880 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D NQ541_01890 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D NQ541_10480 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D NQ541_03380 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D NQ541_08620 propionate CoA-transferase K01026 pct; propionate CoA-transferase [EC:2.8.3.1] D NQ541_04165 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D NQ541_11220 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D NQ541_10100 aldo/keto reductase K23257 yvgN; methylglyoxal/glyoxal reductase [EC:1.1.1.283 1.1.1.-] D NQ541_00575 VOC family protein K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D NQ541_09145 MBL fold metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D NQ541_04325 NADP-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D NQ541_05780 oxaloacetate decarboxylase subunit alpha K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2] D NQ541_05785 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D NQ541_12380 fumarate hydratase K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2] D NQ541_12375 Fe-S-containing hydro-lyase K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2] D NQ541_03695 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D NQ541_02480 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D NQ541_05805 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:rlr00630] D NQ541_01255 citrate/2-methylcitrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D NQ541_11740 citrate/2-methylcitrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D NQ541_00870 hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D NQ541_07165 HAD family hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D NQ541_07185 HAD family hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D NQ541_07440 HAD-IIIA family hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D NQ541_01345 glutamine synthetase III K01915 glnA; glutamine synthetase [EC:6.3.1.2] D NQ541_01670 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D NQ541_04395 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D NQ541_11105 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D NQ541_02515 fucO; lactaldehyde reductase K00048 fucO; lactaldehyde reductase [EC:1.1.1.77] C 00640 Propanoate metabolism [PATH:rlr00640] D NQ541_08620 propionate CoA-transferase K01026 pct; propionate CoA-transferase [EC:2.8.3.1] D NQ541_06750 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D NQ541_06755 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D NQ541_03210 pflB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D NQ541_01880 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D NQ541_01890 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D NQ541_04165 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D NQ541_11220 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D NQ541_05380 methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3] D NQ541_10100 aldo/keto reductase K23257 yvgN; methylglyoxal/glyoxal reductase [EC:1.1.1.283 1.1.1.-] D NQ541_02515 fucO; lactaldehyde reductase K00048 fucO; lactaldehyde reductase [EC:1.1.1.77] C 00650 Butanoate metabolism [PATH:rlr00650] D NQ541_02100 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D NQ541_05785 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D NQ541_05790 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma D NQ541_00280 FAD-binding protein K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D NQ541_00285 2Fe-2S iron-sulfur cluster-binding protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D NQ541_03210 pflB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D NQ541_09645 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D NQ541_05050 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D NQ541_09060 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D NQ541_06885 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D NQ541_09055 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] C 00660 C5-Branched dibasic acid metabolism [PATH:rlr00660] D NQ541_05050 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D NQ541_09060 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D NQ541_06885 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D NQ541_09055 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D NQ541_03570 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D NQ541_03575 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D NQ541_05040 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism D NQ541_07235 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:rlr00190] D NQ541_11710 NAD(P)H-dependent oxidoreductase subunit E K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2] D NQ541_11705 nuoF; NADH-quinone oxidoreductase subunit NuoF K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2] D NQ541_11700 [FeFe] hydrogenase, group A K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2] D NQ541_00280 FAD-binding protein K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D NQ541_00285 2Fe-2S iron-sulfur cluster-binding protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D NQ541_01390 atpA; F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D NQ541_01400 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D NQ541_01395 atpG; ATP synthase F1 subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D NQ541_01405 atpC; ATP synthase F1 subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D NQ541_01375 atpE; ATP synthase F0 subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D NQ541_10935 V-type ATP synthase subunit A K02117 ATPVA; V/A-type H+/Na+-transporting ATPase subunit A [EC:7.1.2.2 7.2.2.1] D NQ541_10940 V-type ATP synthase subunit B K02118 ATPVB; V/A-type H+/Na+-transporting ATPase subunit B D NQ541_10945 V-type ATP synthase subunit D K02120 ATPVD; V/A-type H+/Na+-transporting ATPase subunit D D NQ541_10925 V-type ATP synthase subunit F K02122 ATPVF; V/A-type H+/Na+-transporting ATPase subunit F D NQ541_10915 ATPase K02123 ATPVI; V/A-type H+/Na+-transporting ATPase subunit I D NQ541_10920 ATP synthase subunit C K02124 ATPVK; V/A-type H+/Na+-transporting ATPase subunit K D NQ541_04240 putative manganese-dependent inorganic diphosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1] D NQ541_08275 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D NQ541_07110 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation by Calvin cycle [PATH:rlr00710] D NQ541_07240 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D NQ541_07245 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D NQ541_01340 fba; class II fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D NQ541_00170 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D NQ541_00175 transketolase family protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D NQ541_10560 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D NQ541_07235 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D NQ541_09770 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D NQ541_00165 fsa; fructose-6-phosphate aldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D NQ541_03695 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D NQ541_02480 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] C 00720 Other carbon fixation pathways [PATH:rlr00720] D NQ541_09645 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D NQ541_02480 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D NQ541_12380 fumarate hydratase K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2] D NQ541_12375 Fe-S-containing hydro-lyase K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2] D NQ541_00280 FAD-binding protein K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D NQ541_00285 2Fe-2S iron-sulfur cluster-binding protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D NQ541_06770 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D NQ541_00870 hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D NQ541_01880 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D NQ541_01890 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D NQ541_06655 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3] D NQ541_06650 folD; bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D NQ541_05180 metF; methylenetetrahydrofolate reductase [NAD(P)H] K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D NQ541_06755 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D NQ541_06750 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] C 00680 Methane metabolism [PATH:rlr00680] D NQ541_04395 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D NQ541_04255 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D NQ541_01340 fba; class II fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D NQ541_10985 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D NQ541_11260 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D NQ541_00145 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D NQ541_03060 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D NQ541_06750 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D NQ541_06755 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D NQ541_07195 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D NQ541_05060 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D NQ541_05055 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D NQ541_11030 thrH; bifunctional phosphoserine phosphatase/homoserine phosphotransferase ThrH K02203 thrH; phosphoserine / homoserine phosphotransferase [EC:3.1.3.3 2.7.1.39] C 00910 Nitrogen metabolism [PATH:rlr00910] D NQ541_00220 hcp; hydroxylamine reductase K05601 hcp; hydroxylamine reductase [EC:1.7.99.1] D NQ541_05205 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D NQ541_01345 glutamine synthetase III K01915 glnA; glutamine synthetase [EC:6.3.1.2] D NQ541_01670 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D NQ541_08760 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D NQ541_06630 gltA; NADPH-dependent glutamate synthase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D NQ541_08755 glutamate synthase subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D NQ541_01620 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] C 00920 Sulfur metabolism [PATH:rlr00920] D NQ541_04550 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D NQ541_11810 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D NQ541_04670 metA; homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31] D NQ541_11795 PLP-dependent aspartate aminotransferase family protein K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:rlr00061] D NQ541_01880 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D NQ541_01890 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D NQ541_01855 acpP; acyl carrier protein K02078 acpP; acyl carrier protein D NQ541_06730 acpP; acyl carrier protein K02078 acpP; acyl carrier protein D NQ541_01865 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D NQ541_01850 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D NQ541_01875 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D NQ541_01870 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D NQ541_02205 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D NQ541_01885 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:rlr00071] D NQ541_02100 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D NQ541_03380 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis [PATH:rlr00121] D NQ541_03745 bsh; choloylglycine hydrolase K01442 cbh; choloylglycine hydrolase [EC:3.5.1.24] C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:rlr00561] D NQ541_11105 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D NQ541_03380 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D NQ541_01270 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30] D NQ541_06735 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D NQ541_07055 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D NQ541_10280 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 00564 Glycerophospholipid metabolism [PATH:rlr00564] D NQ541_07050 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D NQ541_07055 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D NQ541_10280 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D NQ541_08465 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D NQ541_02325 phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D NQ541_06955 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D NQ541_10960 cls; cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] D NQ541_12640 cls; cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] D NQ541_12635 phospholipase D family protein K06132 clsC; cardiolipin synthase C [EC:2.7.8.-] C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism D NQ541_08655 DUF4981 domain-containing protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23] C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism C 01040 Biosynthesis of unsaturated fatty acids B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:rlr00230] D NQ541_07285 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D NQ541_11040 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D NQ541_07075 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D NQ541_10790 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D NQ541_07355 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D NQ541_10115 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D NQ541_10120 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D NQ541_04500 phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] D NQ541_10125 purM; phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D NQ541_10130 purE; 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D NQ541_00830 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D NQ541_07350 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D NQ541_01730 phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D NQ541_01725 IMP cyclohydrolase K11176 purO; IMP cyclohydrolase [EC:3.5.4.10] D NQ541_07040 purine-nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1] D NQ541_11885 hpt; hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D NQ541_08820 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D NQ541_09480 XTP/dITP diphosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D NQ541_10525 xanthine phosphoribosyltransferase K03816 xpt; xanthine phosphoribosyltransferase [EC:2.4.2.22] D NQ541_00940 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D NQ541_06970 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D NQ541_03870 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D NQ541_01425 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1] D NQ541_09150 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D NQ541_02190 GTP pyrophosphokinase family protein K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5] D NQ541_03080 GTP pyrophosphokinase family protein K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5] D NQ541_10105 (p)ppGpp synthetase K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5] D NQ541_04640 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D NQ541_01485 amidohydrolase family protein K01486 ade; adenine deaminase [EC:3.5.4.2] D NQ541_01490 ade; adenine deaminase K01486 ade; adenine deaminase [EC:3.5.4.2] D NQ541_02055 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D NQ541_01620 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] C 00240 Pyrimidine metabolism [PATH:rlr00240] D NQ541_08430 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D NQ541_08435 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D NQ541_07005 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D NQ541_07010 aspartate carbamoyltransferase regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit D NQ541_01935 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D NQ541_10160 dihydroorotate dehydrogenase K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14] D NQ541_10165 dihydroorotate dehydrogenase electron transfer subunit K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit D NQ541_10155 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D NQ541_10170 pyrF; orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D NQ541_08480 pyrH; UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D NQ541_01355 Maf family protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D NQ541_08245 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2] D NQ541_05760 cmk; (d)CMP kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D NQ541_05000 nucleoside kinase K00876 udk; uridine kinase [EC:2.7.1.48] D NQ541_12390 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D NQ541_06590 pyrimidine-nucleoside phosphorylase K00756 pdp; pyrimidine-nucleoside phosphorylase [EC:2.4.2.2] D NQ541_04175 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5] D NQ541_03870 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D NQ541_12385 dCMP deaminase family protein K01493 comEB; dCMP deaminase [EC:3.5.4.12] D NQ541_04870 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D NQ541_09085 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:rlr00250] D NQ541_04365 pyridoxal phosphate-dependent aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D NQ541_12115 FAD-binding protein K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D NQ541_03435 asnA; aspartate--ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1] D NQ541_01610 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D NQ541_07530 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D NQ541_05250 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D NQ541_03980 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D NQ541_03560 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D NQ541_04640 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D NQ541_07350 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D NQ541_07005 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D NQ541_07010 aspartate carbamoyltransferase regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit D NQ541_08760 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D NQ541_06630 gltA; NADPH-dependent glutamate synthase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D NQ541_08755 glutamate synthase subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D NQ541_05205 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D NQ541_01345 glutamine synthetase III K01915 glnA; glutamine synthetase [EC:6.3.1.2] D NQ541_01670 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D NQ541_08430 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D NQ541_08435 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D NQ541_02780 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D NQ541_07355 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:rlr00260] D NQ541_05490 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D NQ541_03565 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D NQ541_08130 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D NQ541_09095 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D NQ541_11030 thrH; bifunctional phosphoserine phosphatase/homoserine phosphotransferase ThrH K02203 thrH; phosphoserine / homoserine phosphotransferase [EC:3.1.3.3 2.7.1.39] D NQ541_03585 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D NQ541_04250 low specificity L-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48] D NQ541_04395 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D NQ541_11105 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D NQ541_07195 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D NQ541_05060 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D NQ541_05055 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D NQ541_03390 sdaAB; L-serine ammonia-lyase, iron-sulfur-dependent subunit beta K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D NQ541_03395 sdaAA; L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D NQ541_06710 ilvA; threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D NQ541_02550 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D NQ541_02545 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] C 00270 Cysteine and methionine metabolism [PATH:rlr00270] D NQ541_04550 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D NQ541_11810 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D NQ541_11790 pyridoxal phosphate-dependent aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D NQ541_05190 homocysteine S-methyltransferase family protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D NQ541_03230 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D NQ541_11100 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D NQ541_01195 speE; polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16] D NQ541_07230 5'-methylthioadenosine/adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9] D NQ541_00815 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D NQ541_06055 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D NQ541_10295 S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21] D NQ541_05490 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D NQ541_03565 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D NQ541_08130 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D NQ541_09095 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D NQ541_04670 metA; homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31] D NQ541_11795 PLP-dependent aspartate aminotransferase family protein K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D NQ541_06670 O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] D NQ541_11805 O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] D NQ541_01290 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D NQ541_04365 pyridoxal phosphate-dependent aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D NQ541_04165 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D NQ541_11220 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D NQ541_03390 sdaAB; L-serine ammonia-lyase, iron-sulfur-dependent subunit beta K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D NQ541_03395 sdaAA; L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D NQ541_05060 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D NQ541_05055 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00280 Valine, leucine and isoleucine degradation [PATH:rlr00280] D NQ541_01290 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D NQ541_07085 NAD(P)-dependent oxidoreductase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] D NQ541_03380 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:rlr00290] D NQ541_06710 ilvA; threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D NQ541_03570 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D NQ541_03575 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D NQ541_05040 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D NQ541_05050 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D NQ541_09060 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D NQ541_06885 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D NQ541_09055 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D NQ541_06880 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D NQ541_05045 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D NQ541_01290 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D NQ541_05250 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D NQ541_05805 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:rlr00300] D NQ541_08130 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D NQ541_09095 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D NQ541_05490 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D NQ541_03565 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D NQ541_03195 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D NQ541_08170 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D NQ541_04030 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D NQ541_01680 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D NQ541_04865 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83] D NQ541_10075 LL-diaminopimelate aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83] D NQ541_07175 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D NQ541_08525 diaminopimelate dehydrogenase K03340 dapdh; diaminopimelate dehydrogenase [EC:1.4.1.16] D NQ541_09820 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D NQ541_00360 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation D NQ541_03380 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00220 Arginine biosynthesis [PATH:rlr00220] D NQ541_03980 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D NQ541_03560 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D NQ541_01345 glutamine synthetase III K01915 glnA; glutamine synthetase [EC:6.3.1.2] D NQ541_01670 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D NQ541_08430 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D NQ541_08435 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D NQ541_01620 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] D NQ541_05205 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D NQ541_04365 pyridoxal phosphate-dependent aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D NQ541_05250 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D NQ541_04020 argJ; bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] D NQ541_04015 GNAT family N-acetyltransferase K22477 argO; N-acetylglutamate synthase [EC:2.3.1.1] D NQ541_04025 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D NQ541_04010 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D NQ541_04030 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] C 00330 Arginine and proline metabolism [PATH:rlr00330] D NQ541_01190 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K01585 speA; arginine decarboxylase [EC:4.1.1.19] D NQ541_01200 speB; agmatinase K01480 speB; agmatinase [EC:3.5.3.11] D NQ541_01195 speE; polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16] D NQ541_01210 nspC; carboxynorspermidine decarboxylase K13747 nspC; carboxynorspermidine decarboxylase [EC:4.1.1.96] D NQ541_03380 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D NQ541_10475 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D NQ541_08305 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D NQ541_04005 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] D NQ541_04365 pyridoxal phosphate-dependent aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] C 00340 Histidine metabolism [PATH:rlr00340] D NQ541_05560 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D NQ541_05565 hisZ; ATP phosphoribosyltransferase regulatory subunit K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit D NQ541_09405 hisH; imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D NQ541_09400 hisF; imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D NQ541_05550 hisB; imidazoleglycerol-phosphate dehydratase HisB K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] D NQ541_04370 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D NQ541_05555 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] D NQ541_03380 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00350 Tyrosine metabolism [PATH:rlr00350] D NQ541_04365 pyridoxal phosphate-dependent aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D NQ541_04370 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D NQ541_02100 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] C 00360 Phenylalanine metabolism [PATH:rlr00360] D NQ541_04410 phenylacetate--CoA ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30] D NQ541_04430 phenylacetate--CoA ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30] D NQ541_08310 PaaI family thioesterase K02614 paaI; acyl-CoA thioesterase [EC:3.1.2.-] D NQ541_04365 pyridoxal phosphate-dependent aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D NQ541_04370 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00380 Tryptophan metabolism [PATH:rlr00380] D NQ541_03380 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:rlr00400] D NQ541_07015 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D NQ541_08495 aroF; 3-deoxy-7-phosphoheptulonate synthase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D NQ541_08500 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D NQ541_02935 aroD; type I 3-dehydroquinate dehydratase K03785 aroD; 3-dehydroquinate dehydratase I [EC:4.2.1.10] D NQ541_11820 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D NQ541_03815 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D NQ541_05020 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D NQ541_02520 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D NQ541_02530 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D NQ541_02535 trpC; indole-3-glycerol phosphate synthase TrpC K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48] D NQ541_02550 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D NQ541_02545 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D NQ541_06995 pheA; prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51] D NQ541_03820 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D NQ541_04365 pyridoxal phosphate-dependent aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D NQ541_04370 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:rlr00410] D NQ541_02445 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D NQ541_03380 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D NQ541_02440 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] C 00430 Taurine and hypotaurine metabolism [PATH:rlr00430] D NQ541_06755 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D NQ541_06750 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] C 00440 Phosphonate and phosphinate metabolism C 00450 Selenocompound metabolism [PATH:rlr00450] D NQ541_11795 PLP-dependent aspartate aminotransferase family protein K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D NQ541_11790 pyridoxal phosphate-dependent aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D NQ541_05190 homocysteine S-methyltransferase family protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D NQ541_03230 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D NQ541_10470 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D NQ541_12725 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D NQ541_00895 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:rlr00460] D NQ541_03435 asnA; aspartate--ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1] D NQ541_04395 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:rlr00470] D NQ541_06685 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D NQ541_00365 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D NQ541_10980 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D NQ541_07480 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D NQ541_01680 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D NQ541_07175 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] C 00480 Glutathione metabolism [PATH:rlr00480] D NQ541_09030 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-] D NQ541_06770 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D NQ541_01195 speE; polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation [PATH:rlr00511] D NQ541_08655 DUF4981 domain-containing protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23] C 00540 Lipopolysaccharide biosynthesis C 00542 O-Antigen repeat unit biosynthesis C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:rlr00541] D NQ541_04275 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D NQ541_09515 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D NQ541_02720 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D NQ541_07090 UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D NQ541_07610 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] C 00550 Peptidoglycan biosynthesis [PATH:rlr00550] D NQ541_11815 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D NQ541_01310 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D NQ541_10775 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D NQ541_07480 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D NQ541_09820 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D NQ541_00365 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D NQ541_00360 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D NQ541_04125 diacylglycerol kinase family protein K00887 dgkA; undecaprenol kinase [EC:2.7.1.66] D NQ541_08470 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D NQ541_02120 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D NQ541_07485 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D NQ541_00115 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D NQ541_05830 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] C 00552 Teichoic acid biosynthesis [PATH:rlr00552] D NQ541_02120 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D NQ541_07585 WecB/TagA/CpsF family glycosyltransferase K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187] D NQ541_07650 glycosyltransferase family 2 protein K25617 csbB; lipoteichoic acid polyisoprenyl-phosphate beta-N-acetylglucosaminyltransferase [EC:2.4.-.-] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:rlr00543] D NQ541_10385 MBOAT family protein K19294 algI; alginate O-acetyltransferase complex protein AlgI D NQ541_04550 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:rlr00730] D NQ541_10420 thiC; phosphomethylpyrimidine synthase ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17] D NQ541_10425 thiD; bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D NQ541_11125 thiF; sulfur carrier protein ThiS adenylyltransferase ThiF K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73] D NQ541_07265 nifS; cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D NQ541_08915 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D NQ541_08910 thiI; tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D NQ541_10500 hydG; [FeFe] hydrogenase H-cluster radical SAM maturase HydG K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19] D NQ541_11115 thiH; 2-iminoacetate synthase ThiH K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19] D NQ541_05140 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D NQ541_05300 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D NQ541_11120 thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10] D NQ541_09775 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D NQ541_09765 thiamine diphosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2] D NQ541_02055 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism D NQ541_07285 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] C 00750 Vitamin B6 metabolism [PATH:rlr00750] D NQ541_03370 pyridoxamine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35] D NQ541_05055 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D NQ541_03585 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D NQ541_03500 pdxS; pyridoxal 5'-phosphate synthase lyase subunit PdxS K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6] D NQ541_03495 pdxT; pyridoxal 5'-phosphate synthase glutaminase subunit PdxT K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6] C 00760 Nicotinate and nicotinamide metabolism [PATH:rlr00760] D NQ541_12115 FAD-binding protein K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D NQ541_12120 nadA; quinolinate synthase NadA K03517 nadA; quinolinate synthase [EC:2.5.1.72] D NQ541_12110 nadC; carboxylating nicotinate-nucleotide diphosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] D NQ541_11000 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D NQ541_07040 purine-nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1] D NQ541_05455 nadD; nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D NQ541_10340 nudC; NAD(+) diphosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22] D NQ541_09000 NAD(+) synthase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1] D NQ541_06950 nicotinamide-nucleotide amidohydrolase family protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42] D NQ541_01910 NAD-dependent protein deacylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313] C 00770 Pantothenate and CoA biosynthesis [PATH:rlr00770] D NQ541_05050 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D NQ541_09060 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D NQ541_06885 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D NQ541_09055 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D NQ541_06880 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D NQ541_05045 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D NQ541_02440 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D NQ541_11850 type III pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33] D NQ541_11855 coaBC; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D NQ541_05620 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D NQ541_01290 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D NQ541_02445 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D NQ541_03380 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00780 Biotin metabolism [PATH:rlr00780] D NQ541_01875 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D NQ541_01870 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D NQ541_02205 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D NQ541_01885 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D NQ541_10495 hydE; [FeFe] hydrogenase H-cluster radical SAM maturase HydE K01012 bioB; biotin synthase [EC:2.8.1.6] D NQ541_11785 bioB; biotin synthase BioB K01012 bioB; biotin synthase [EC:2.8.1.6] D NQ541_11760 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism C 00790 Folate biosynthesis [PATH:rlr00790] D NQ541_03790 folE; GTP cyclohydrolase I FolE K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16] D NQ541_06330 folE; GTP cyclohydrolase I FolE K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16] D NQ541_03805 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K13940 sulD; dihydroneopterin aldolase / 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:4.1.2.25 2.7.6.3] D NQ541_03800 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D NQ541_09080 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D NQ541_02525 aminodeoxychorismate/anthranilate synthase component II K01664 pabA; para-aminobenzoate synthetase component II [EC:2.6.1.85] D NQ541_06340 queD; 6-carboxytetrahydropterin synthase QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D NQ541_06335 queE; putative 7-carboxy-7-deazaguanine synthase QueE K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D NQ541_06325 queC; 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D NQ541_06320 queF; preQ(1) synthase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] C 00670 One carbon pool by folate [PATH:rlr00670] D NQ541_09080 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D NQ541_06655 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3] D NQ541_06650 folD; bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D NQ541_04395 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D NQ541_10120 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D NQ541_01730 phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D NQ541_09805 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D NQ541_05190 homocysteine S-methyltransferase family protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D NQ541_09085 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D NQ541_05180 metF; methylenetetrahydrofolate reductase [NAD(P)H] K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:rlr00860] D NQ541_07335 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D NQ541_09980 sirohydrochlorin cobaltochelatase K02190 cbiK; sirohydrochlorin cobaltochelatase [EC:4.99.1.3] D NQ541_03660 cobJ; precorrin-3B C(17)-methyltransferase K05934 cobJ; precorrin-3B C17-methyltransferase / cobalt-factor III methyltransferase [EC:2.1.1.131 2.1.1.272] D NQ541_03655 cobM; precorrin-4 C(11)-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271] D NQ541_03645 cbiD; cobalt-precorrin-5B (C(1))-methyltransferase CbiD K02188 cbiD; cobalt-precorrin-5B (C1)-methyltransferase [EC:2.1.1.195] D NQ541_03765 precorrin-8X methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60] D NQ541_03640 cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D NQ541_03730 cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10] D NQ541_03715 cbiB; adenosylcobinamide-phosphate synthase CbiB K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10] D NQ541_03700 cobT; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:rlr00900] D NQ541_05140 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D NQ541_05300 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D NQ541_08460 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D NQ541_01760 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] D NQ541_10265 ispE; 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D NQ541_04540 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] D NQ541_04385 ispG; flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D NQ541_05755 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D NQ541_05135 polyprenyl synthetase family protein K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D NQ541_08470 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation D NQ541_03380 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00907 Pinene, camphor and geraniol degradation C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D NQ541_00170 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D NQ541_00175 transketolase family protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis D NQ541_02720 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides C 01055 Biosynthesis of vancomycin group antibiotics D NQ541_02720 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis C 00332 Carbapenem biosynthesis [PATH:rlr00332] D NQ541_08305 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D NQ541_04005 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00261 Monobactam biosynthesis [PATH:rlr00261] D NQ541_05490 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D NQ541_03565 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D NQ541_03195 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D NQ541_08170 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:rlr00521] D NQ541_08205 ROK family glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D NQ541_11040 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D NQ541_02720 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00524 Neomycin, kanamycin and gentamicin biosynthesis D NQ541_08205 ROK family glucokinase K25026 glk; glucokinase [EC:2.7.1.2] C 00525 Acarbose and validamycin biosynthesis D NQ541_02720 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis [PATH:rlr00401] D NQ541_03820 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D NQ541_04365 pyridoxal phosphate-dependent aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D NQ541_04370 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis D NQ541_02520 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis D NQ541_01865 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D NQ541_01870 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D NQ541_02205 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D NQ541_01855 acpP; acyl carrier protein K02078 acpP; acyl carrier protein D NQ541_06730 acpP; acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites D NQ541_11100 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:rlr00362] D NQ541_00545 carboxymuconolactone decarboxylase family protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44] D NQ541_12655 carboxymuconolactone decarboxylase family protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44] D NQ541_05785 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D NQ541_05790 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma C 00627 Aminobenzoate degradation D NQ541_10480 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] C 00364 Fluorobenzoate degradation C 00625 Chloroalkane and chloroalkene degradation [PATH:rlr00625] D NQ541_02100 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D NQ541_03380 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00361 Chlorocyclohexane and chlorobenzene degradation C 00623 Toluene degradation C 00622 Xylene degradation C 00633 Nitrotoluene degradation C 00642 Ethylbenzene degradation C 00643 Styrene degradation D NQ541_08620 propionate CoA-transferase K01026 pct; propionate CoA-transferase [EC:2.8.3.1] C 00791 Atrazine degradation C 00930 Caprolactam degradation C 00363 Bisphenol degradation C 00621 Dioxin degradation C 00626 Naphthalene degradation [PATH:rlr00626] D NQ541_02100 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:rlr03020] D NQ541_10855 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D NQ541_10850 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D NQ541_02090 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D NQ541_06965 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors D NQ541_04485 ATP-dependent DNA helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:rlr03010] D NQ541_04235 S1 RNA-binding domain-containing protein K02945 RP-S1; small subunit ribosomal protein S1 D NQ541_08685 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D NQ541_01980 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D NQ541_02085 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D NQ541_02035 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D NQ541_00440 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D NQ541_10730 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D NQ541_02020 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D NQ541_10325 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D NQ541_01945 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D NQ541_02080 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D NQ541_10735 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D NQ541_02075 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D NQ541_02015 type Z 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D NQ541_06800 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D NQ541_08375 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D NQ541_01995 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D NQ541_00450 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D NQ541_01970 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D NQ541_06870 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D NQ541_05200 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D NQ541_10870 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D NQ541_01965 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D NQ541_01950 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D NQ541_01955 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D NQ541_02010 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D NQ541_02025 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D NQ541_10860 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D NQ541_00460 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D NQ541_10865 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D NQ541_10875 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D NQ541_10330 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D NQ541_02000 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D NQ541_02045 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D NQ541_01985 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D NQ541_02095 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D NQ541_02030 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D NQ541_08355 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D NQ541_04960 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D NQ541_05480 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D NQ541_01975 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D NQ541_01960 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D NQ541_02005 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D NQ541_05470 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D NQ541_05650 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D NQ541_01990 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D NQ541_02040 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D NQ541_04340 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D NQ541_06740 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D NQ541_10890 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D NQ541_12890 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D NQ541_04955 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D NQ541_02070 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D NQ541_03475 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D NQ541_01775 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D NQ541_01795 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:rlr00970] D NQ541_04510 tRNA-Met K14230 tRNA-Met; tRNA Met D NQ541_07535 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D NQ541_07335 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D NQ541_10000 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D NQ541_09995 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D NQ541_10005 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D NQ541_04630 glutamine--tRNA ligase/YqeY domain fusion protein K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D NQ541_05195 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D NQ541_09130 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D NQ541_10020 aspS; aspartate--tRNA(Asn) ligase K09759 aspC; nondiscriminating aspartyl-tRNA synthetase [EC:6.1.1.23] D NQ541_11950 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D NQ541_02460 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D NQ541_05260 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D NQ541_12830 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D NQ541_04555 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D NQ541_00895 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D NQ541_09805 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D NQ541_02230 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D NQ541_03885 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D NQ541_12465 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D NQ541_11680 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D NQ541_08775 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D NQ541_10740 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D NQ541_09135 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D NQ541_03610 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D NQ541_03615 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D NQ541_09885 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D NQ541_02165 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:rlr03060] D NQ541_02050 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D NQ541_09640 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D NQ541_09160 protein translocase subunit SecDF K12257 secDF; SecD/SecF fusion protein D NQ541_05035 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D NQ541_12875 YidC/Oxa1 family membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase D NQ541_08140 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D NQ541_08380 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D NQ541_01445 ffs; signal recognition particle sRNA large type K01983 ffs; SRP RNA D NQ541_06715 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D NQ541_03000 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D NQ541_08340 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D NQ541_12340 S24/S26 family peptidase K13280 SEC11; signal peptidase I [EC:3.4.21.89] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:rlr04122] D NQ541_07265 nifS; cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D NQ541_08915 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D NQ541_07255 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D NQ541_08910 thiI; tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D NQ541_11130 thiS; sulfur carrier protein ThiS K03154 thiS; sulfur carrier protein D NQ541_11125 thiF; sulfur carrier protein ThiS adenylyltransferase ThiF K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73] C 03050 Proteasome C 03018 RNA degradation [PATH:rlr03018] D NQ541_04255 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D NQ541_05065 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D NQ541_09635 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D NQ541_04335 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D NQ541_07290 rny; ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-] D NQ541_08875 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-] D NQ541_10985 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D NQ541_11260 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D NQ541_04090 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D NQ541_08825 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D NQ541_08275 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D NQ541_07110 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] B B 09124 Replication and repair C 03030 DNA replication [PATH:rlr03030] D NQ541_10990 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D NQ541_04390 PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D NQ541_00150 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D NQ541_12270 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D NQ541_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D NQ541_00465 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D NQ541_04980 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D NQ541_00445 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D NQ541_07030 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D NQ541_08335 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D NQ541_07160 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D NQ541_10370 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:rlr03410] D NQ541_10550 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D NQ541_09395 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D NQ541_01655 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D NQ541_08780 deoxyribonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D NQ541_07160 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D NQ541_09155 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D NQ541_10370 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:rlr03420] D NQ541_07420 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D NQ541_07785 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A D NQ541_07790 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B D NQ541_08215 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C D NQ541_03280 pcrA; DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D NQ541_07160 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D NQ541_10370 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D NQ541_04485 ATP-dependent DNA helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] C 03430 Mismatch repair [PATH:rlr03430] D NQ541_05305 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D NQ541_00500 endonuclease MutS2 K07456 mutS2; DNA mismatch repair protein MutS2 D NQ541_03280 pcrA; DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D NQ541_05125 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D NQ541_05130 xseB; exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D NQ541_09155 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D NQ541_00445 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D NQ541_10990 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D NQ541_04390 PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D NQ541_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D NQ541_00150 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D NQ541_12270 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D NQ541_10370 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D NQ541_10685 Dam family site-specific DNA-(adenine-N6)-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72] C 03440 Homologous recombination [PATH:rlr03440] D NQ541_09155 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D NQ541_00445 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D NQ541_00020 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF D NQ541_00160 recR; recombination mediator RecR K06187 recR; recombination protein RecR D NQ541_07300 recA; recombinase RecA K03553 recA; recombination protein RecA D NQ541_07160 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D NQ541_05700 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA D NQ541_05695 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D NQ541_03090 putative DNA binding domain-containing protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D NQ541_05635 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D NQ541_07775 ATP-dependent RecD-like DNA helicase K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D NQ541_10990 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D NQ541_04390 PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D NQ541_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D NQ541_00150 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D NQ541_12270 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D NQ541_09815 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:rlr02010] D NQ541_05005 extracellular solute-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein D NQ541_05010 ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein D NQ541_05015 ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D NQ541_10440 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D NQ541_12250 ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D NQ541_10580 sugar ABC transporter permease K10201 ngcF; N-acetylglucosamine transport system permease protein D NQ541_10575 carbohydrate ABC transporter permease K10202 ngcG; N-acetylglucosamine transport system permease protein D NQ541_01500 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein D NQ541_01505 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein D NQ541_01495 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein D NQ541_10845 substrate-binding domain-containing protein K10540 mglB; methyl-galactoside transport system substrate-binding protein D NQ541_10835 galactoside ABC transporter permease K10541 mglC; methyl-galactoside transport system permease protein D NQ541_10840 sugar ABC transporter ATP-binding protein K10542 mglA; methyl-galactoside transport system ATP-binding protein [EC:7.5.2.11] D NQ541_02785 substrate-binding domain-containing protein K02040 pstS; phosphate transport system substrate-binding protein D NQ541_02790 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein D NQ541_02795 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein D NQ541_02800 pstB; phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D NQ541_02125 transporter substrate-binding domain-containing protein K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein D NQ541_02130 amino acid ABC transporter permease K17077 artQ; arginine/lysine/histidine transport system permease protein D NQ541_02135 amino acid ABC transporter ATP-binding protein K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1] D NQ541_02965 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D NQ541_02970 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D NQ541_02975 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D NQ541_02980 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D NQ541_09610 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein D NQ541_09615 ABC transporter permease K02072 metI; D-methionine transport system permease protein D NQ541_09620 ATP-binding cassette domain-containing protein K02071 metN; D-methionine transport system ATP-binding protein D NQ541_09065 metal ABC transporter permease K09816 znuB; zinc transport system permease protein D NQ541_09070 metal ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D NQ541_09955 energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein D NQ541_09965 energy-coupling factor transporter ATPase K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D NQ541_09960 energy-coupling factor transporter ATPase K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D NQ541_04525 ABC transporter permease K09690 wzm; homopolymeric O-antigen transport system permease protein D NQ541_07635 ABC transporter permease K09690 wzm; homopolymeric O-antigen transport system permease protein D NQ541_04530 ABC transporter ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14] D NQ541_07630 ABC transporter ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14] D NQ541_11670 lantibiotic immunity ABC transporter MutE/EpiE family permease subunit K20491 nisE; lantibiotic transport system permease protein D NQ541_11665 lantibiotic immunity ABC transporter MutG family permease subunit K20492 nisG; lantibiotic transport system permease protein D NQ541_11675 lantibiotic protection ABC transporter ATP-binding protein K20490 nisF; lantibiotic transport system ATP-binding protein D NQ541_09290 ABC transporter ATP-binding protein K19083 braD; bacitracin transport system ATP-binding protein D NQ541_10035 ftsX; permease-like cell division protein FtsX K09811 ftsX; cell division transport system permease protein D NQ541_10040 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D NQ541_02875 ABC transporter ATP-binding protein/permease K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-] D NQ541_02880 ABC transporter ATP-binding protein/permease K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-] D NQ541_02860 ABC transporter ATP-binding protein/permease K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D NQ541_03185 ABC transporter ATP-binding protein/permease K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D NQ541_08735 ABC transporter ATP-binding protein/permease K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D NQ541_02865 ABC transporter ATP-binding protein/permease K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D NQ541_03190 ABC transporter ATP-binding protein/permease K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D NQ541_08730 ABC transporter ATP-binding protein/permease K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump C 02060 Phosphotransferase system (PTS) [PATH:rlr02060] D NQ541_04470 ptsP; phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D NQ541_04465 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr D NQ541_07740 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr D NQ541_11420 glucose PTS transporter subunit IIA K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199] D NQ541_09895 nagE; N-acetylglucosamine-specific PTS transporter subunit IIBC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193] D NQ541_08950 PTS N-acetylglucosamine transporter subunit IIBC K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D NQ541_08960 PTS sugar transporter subunit IIC K02795 manY; mannose PTS system EIIC component D NQ541_08955 PTS system mannose/fructose/sorbose family transporter subunit IID K02796 manZ; mannose PTS system EIID component D NQ541_11295 PTS sugar transporter subunit IIB K19507 gfrB; fructoselysine/glucoselysine PTS system EIIB component [EC:2.7.1.-] D NQ541_11290 PTS sugar transporter subunit IIC K19508 gfrC; fructoselysine/glucoselysine PTS system EIIC component D NQ541_11285 PTS system mannose/fructose/sorbose family transporter subunit IID K19509 gfrD; fructoselysine/glucoselysine PTS system EIID component D NQ541_04460 fructose-specific PTS transporter subunit EIIC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D NQ541_04455 pfkB; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] C 03070 Bacterial secretion system [PATH:rlr03070] D NQ541_09160 protein translocase subunit SecDF K12257 secDF; SecD/SecF fusion protein D NQ541_09640 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D NQ541_02050 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D NQ541_05035 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D NQ541_12875 YidC/Oxa1 family membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase D NQ541_08140 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D NQ541_06715 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D NQ541_08380 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] B B 09132 Signal transduction C 02020 Two-component system [PATH:rlr02020] D NQ541_02810 response regulator transcription factor K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP D NQ541_02785 substrate-binding domain-containing protein K02040 pstS; phosphate transport system substrate-binding protein D NQ541_10800 response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D NQ541_09415 response regulator transcription factor K07775 resD; two-component system, OmpR family, response regulator ResD D NQ541_00005 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D NQ541_09290 ABC transporter ATP-binding protein K19083 braD; bacitracin transport system ATP-binding protein D NQ541_09300 response regulator transcription factor K19082 braR; two-component system, OmpR family, response regulator protein BraR/BceR D NQ541_11655 HAMP domain-containing histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3] D NQ541_11660 response regulator transcription factor K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR D NQ541_11675 lantibiotic protection ABC transporter ATP-binding protein K20490 nisF; lantibiotic transport system ATP-binding protein D NQ541_11670 lantibiotic immunity ABC transporter MutE/EpiE family permease subunit K20491 nisE; lantibiotic transport system permease protein D NQ541_11665 lantibiotic immunity ABC transporter MutG family permease subunit K20492 nisG; lantibiotic transport system permease protein D NQ541_05170 spo0A; sporulation transcription factor Spo0A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A D NQ541_04325 NADP-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D NQ541_00050 ATPase, T2SS/T4P/T4SS family K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D NQ541_09255 P-II family nitrogen regulator K04751 glnB; nitrogen regulatory protein P-II 1 D NQ541_01345 glutamine synthetase III K01915 glnA; glutamine synthetase [EC:6.3.1.2] D NQ541_01670 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D NQ541_05840 low molecular weight phosphotyrosine protein phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48] D NQ541_07610 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:rlr02024] D NQ541_10295 S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21] D NQ541_02520 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D NQ541_07015 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D NQ541_10800 response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D NQ541_02965 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D NQ541_02970 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D NQ541_02975 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D NQ541_02980 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D NQ541_12875 YidC/Oxa1 family membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase D NQ541_09160 protein translocase subunit SecDF K12257 secDF; SecD/SecF fusion protein D NQ541_09640 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D NQ541_02050 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D NQ541_05035 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D NQ541_08140 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D NQ541_06715 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D NQ541_08380 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D NQ541_05170 spo0A; sporulation transcription factor Spo0A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A D NQ541_11655 HAMP domain-containing histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3] D NQ541_11660 response regulator transcription factor K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR D NQ541_11675 lantibiotic protection ABC transporter ATP-binding protein K20490 nisF; lantibiotic transport system ATP-binding protein D NQ541_11670 lantibiotic immunity ABC transporter MutE/EpiE family permease subunit K20491 nisE; lantibiotic transport system permease protein D NQ541_11665 lantibiotic immunity ABC transporter MutG family permease subunit K20492 nisG; lantibiotic transport system permease protein C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis D NQ541_10845 substrate-binding domain-containing protein K10540 mglB; methyl-galactoside transport system substrate-binding protein C 02040 Flagellar assembly D NQ541_04985 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D NQ541_08155 sigma-70 family RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D NQ541_04255 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism D NQ541_05190 homocysteine S-methyltransferase family protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:rlr01501] D NQ541_07830 BlaR1 family beta-lactam sensor/signal transducer K02172 blaR1; bla regulator protein blaR1 D NQ541_07825 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor C 01502 Vancomycin resistance [PATH:rlr01502] D NQ541_00365 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D NQ541_06685 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D NQ541_00360 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D NQ541_07485 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D NQ541_00115 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:rlr01000] C 01001 Protein kinases [BR:rlr01001] D NQ541_11655 HAMP domain-containing histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:rlr01009] D NQ541_10985 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D NQ541_11260 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D NQ541_10410 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG D NQ541_09785 Stp1/IreP family PP2C-type Ser/Thr phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] C 01002 Peptidases and inhibitors [BR:rlr01002] D NQ541_06865 gpr; GPR endopeptidase K06012 gpr; spore protease [EC:3.4.24.78] D NQ541_00940 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D NQ541_07355 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D NQ541_08760 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D NQ541_02780 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D NQ541_01610 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D NQ541_07530 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D NQ541_08115 DJ-1/PfpI family protein K03152 thiJ; protein deglycase [EC:3.5.1.124] D NQ541_03745 bsh; choloylglycine hydrolase K01442 cbh; choloylglycine hydrolase [EC:3.5.1.24] D NQ541_02300 insulinase family protein K06972 PITRM1; presequence protease [EC:3.4.24.-] D NQ541_03960 dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D NQ541_09030 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-] D NQ541_01285 amidohydrolase K12941 abgB; aminobenzoyl-glutamate utilization protein B D NQ541_11835 methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D NQ541_05775 aminopeptidase P family protein K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D NQ541_05215 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D NQ541_08220 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D NQ541_11880 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D NQ541_08455 rseP; RIP metalloprotease RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D NQ541_07830 BlaR1 family beta-lactam sensor/signal transducer K02172 blaR1; bla regulator protein blaR1 D NQ541_11510 PrsW family glutamic-type intramembrane protease K24131 prsW; protease PrsW [EC:3.4.-.-] D NQ541_05830 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D NQ541_08105 clpP; ATP-dependent Clp endopeptidase proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D NQ541_08095 lon; endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D NQ541_11695 lon; endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D NQ541_05230 AAA family ATPase K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D NQ541_05440 lexA; transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88] D NQ541_03000 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D NQ541_08340 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D NQ541_12340 S24/S26 family peptidase K13280 SEC11; signal peptidase I [EC:3.4.21.89] D NQ541_05885 peptidase E K05995 pepE; dipeptidase E [EC:3.4.13.21] D NQ541_08865 U32 family peptidase K08303 prtC; U32 family peptidase [EC:3.4.-.-] C 01003 Glycosyltransferases [BR:rlr01003] D NQ541_05175 glgA; glycogen synthase GlgA K00703 glgA; starch synthase [EC:2.4.1.21] D NQ541_07585 WecB/TagA/CpsF family glycosyltransferase K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187] D NQ541_07650 glycosyltransferase family 2 protein K25617 csbB; lipoteichoic acid polyisoprenyl-phosphate beta-N-acetylglucosaminyltransferase [EC:2.4.-.-] D NQ541_02625 glycosyltransferase K19423 epsE; glycosyltransferase EpsE [EC:2.4.-.-] C 01005 Lipopolysaccharide biosynthesis proteins [BR:rlr01005] D NQ541_04855 glycosyltransferase family 2 protein K12999 rgpI; glucosyltransferase [EC:2.4.1.-] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:rlr01011] D NQ541_11815 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D NQ541_01310 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D NQ541_10775 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D NQ541_07480 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D NQ541_09820 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D NQ541_00365 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D NQ541_06685 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D NQ541_10980 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D NQ541_07485 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D NQ541_00115 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D NQ541_02120 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D NQ541_07850 penicillin-binding transpeptidase domain-containing protein K21467 pbpC; penicillin-binding protein 3 D NQ541_05830 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] C 01004 Lipid biosynthesis proteins [BR:rlr01004] D NQ541_01865 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D NQ541_01850 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D NQ541_01875 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D NQ541_01870 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D NQ541_02205 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D NQ541_01885 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D NQ541_06735 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D NQ541_07055 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D NQ541_10280 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins C 01006 Prenyltransferases [BR:rlr01006] D NQ541_05135 polyprenyl synthetase family protein K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D NQ541_08470 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D NQ541_05315 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] C 01007 Amino acid related enzymes [BR:rlr01007] D NQ541_07335 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D NQ541_04630 glutamine--tRNA ligase/YqeY domain fusion protein K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D NQ541_09885 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D NQ541_02165 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D NQ541_04555 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D NQ541_08775 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D NQ541_00895 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D NQ541_12465 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D NQ541_02230 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D NQ541_03885 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D NQ541_11680 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D NQ541_09130 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D NQ541_11950 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D NQ541_10020 aspS; aspartate--tRNA(Asn) ligase K09759 aspC; nondiscriminating aspartyl-tRNA synthetase [EC:6.1.1.23] D NQ541_09135 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D NQ541_02460 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D NQ541_12830 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D NQ541_10740 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D NQ541_05260 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D NQ541_05195 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D NQ541_03610 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D NQ541_03615 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D NQ541_04365 pyridoxal phosphate-dependent aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D NQ541_05250 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D NQ541_04865 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83] D NQ541_10075 LL-diaminopimelate aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83] D NQ541_04370 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D NQ541_11790 pyridoxal phosphate-dependent aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D NQ541_04030 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D NQ541_01290 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D NQ541_05055 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:rlr00194] D NQ541_01405 atpC; ATP synthase F1 subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D NQ541_01400 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D NQ541_01395 atpG; ATP synthase F1 subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D NQ541_01390 atpA; F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D NQ541_01375 atpE; ATP synthase F0 subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:rlr03000] D NQ541_00815 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D NQ541_06055 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D NQ541_08660 AraC family transcriptional regulator K02099 araC; AraC family transcriptional regulator, arabinose operon regulatory protein D NQ541_04450 DeoR/GlpR family DNA-binding transcription regulator K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor D NQ541_00925 spoIIID; sporulation transcriptional regulator SpoIIID K06283 spoIIID; putative DeoR family transcriptional regulator, stage III sporulation protein D D NQ541_05295 MerR family transcriptional regulator K21745 adhR; MerR family transcriptional regulator, aldehyde-responsive regulator D NQ541_08880 transcriptional repressor K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D NQ541_12430 transcriptional repressor K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator D NQ541_07270 Rrf2 family transcriptional regulator K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor D NQ541_00260 metalloregulator ArsR/SmtB family transcription factor K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor D NQ541_04170 metal-dependent transcriptional regulator K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator D NQ541_07825 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D NQ541_11760 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D NQ541_10045 helix-turn-helix domain-containing protein K02647 cdaR; carbohydrate diacid regulator D NQ541_06695 redox-sensing transcriptional repressor Rex K01926 rex; redox-sensing transcriptional repressor D NQ541_08840 codY; GTP-sensing pleiotropic transcriptional regulator CodY K03706 codY; transcriptional pleiotropic repressor D NQ541_04945 XRE family transcriptional regulator K07726 K07726; putative transcriptional regulator D NQ541_06095 helix-turn-helix transcriptional regulator K07727 K07727; putative transcriptional regulator D NQ541_01075 helix-turn-helix transcriptional regulator K07727 K07727; putative transcriptional regulator D NQ541_12045 helix-turn-helix transcriptional regulator K07729 K07729; putative transcriptional regulator D NQ541_12610 helix-turn-helix transcriptional regulator K07729 K07729; putative transcriptional regulator D NQ541_06435 helix-turn-helix transcriptional regulator K07729 K07729; putative transcriptional regulator D NQ541_09905 PRD domain-containing protein K03488 licT; beta-glucoside operon transcriptional antiterminator D NQ541_10290 metal-sensing transcriptional repressor K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor D NQ541_09180 AbrB/MazE/SpoVT family DNA-binding domain-containing protein K04769 spoVT; AbrB family transcriptional regulator, stage V sporulation protein T D NQ541_12840 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D NQ541_07930 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D NQ541_05155 arginine repressor K03402 argR; transcriptional regulator of arginine metabolism D NQ541_04080 hrcA; heat-inducible transcriptional repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor D NQ541_01645 nrdR; transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR D NQ541_07510 mraZ; division/cell wall cluster transcriptional repressor MraZ K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:rlr03021] D NQ541_04485 ATP-dependent DNA helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] D NQ541_02090 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D NQ541_10855 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D NQ541_10850 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D NQ541_06965 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D NQ541_04985 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D NQ541_08155 sigma-70 family RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor D NQ541_02265 sigF; RNA polymerase sporulation sigma factor SigF K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor D NQ541_07445 sigG; RNA polymerase sporulation sigma factor SigG K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor D NQ541_07455 sigE; RNA polymerase sporulation sigma factor SigE K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor D NQ541_08860 sigK; RNA polymerase sporulation sigma factor SigK K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor D NQ541_04570 sigma-70 family RNA polymerase sigma factor K27000 sigH; RNA polymerase sigma-H factor D NQ541_06840 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA D NQ541_05120 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB D NQ541_10880 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D NQ541_07190 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D NQ541_11685 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D NQ541_04335 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:rlr03019] D NQ541_06725 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D NQ541_08875 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-] D NQ541_07290 rny; ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-] D NQ541_09635 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D NQ541_00515 HD domain-containing protein K03698 cbf; 3'-5' exoribonuclease [EC:3.1.-.-] D NQ541_04255 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D NQ541_05065 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D NQ541_04335 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D NQ541_10985 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D NQ541_11260 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D NQ541_04090 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D NQ541_08825 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D NQ541_08275 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D NQ541_07110 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D NQ541_01315 rapZ; RNase adapter RapZ K06958 rapZ; RNase adapter protein RapZ C 03041 Spliceosome C 03011 Ribosome [BR:rlr03011] D NQ541_04235 S1 RNA-binding domain-containing protein K02945 RP-S1; small subunit ribosomal protein S1 D NQ541_08685 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D NQ541_01980 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D NQ541_02085 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D NQ541_02035 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D NQ541_00440 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D NQ541_10730 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D NQ541_02020 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D NQ541_10325 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D NQ541_01945 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D NQ541_02080 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D NQ541_10735 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D NQ541_02075 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D NQ541_02015 type Z 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D NQ541_06800 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D NQ541_08375 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D NQ541_01995 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D NQ541_00450 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D NQ541_01970 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D NQ541_06870 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D NQ541_05200 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D NQ541_10870 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D NQ541_01965 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D NQ541_01950 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D NQ541_01955 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D NQ541_02010 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D NQ541_02025 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D NQ541_00460 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D NQ541_10865 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D NQ541_10875 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D NQ541_10860 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D NQ541_10330 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D NQ541_02000 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D NQ541_02045 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D NQ541_01985 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D NQ541_02095 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D NQ541_02030 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D NQ541_08355 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D NQ541_04960 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D NQ541_05480 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D NQ541_01975 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D NQ541_01960 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D NQ541_02005 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D NQ541_05470 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D NQ541_05650 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D NQ541_01990 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D NQ541_02040 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D NQ541_04340 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D NQ541_06740 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D NQ541_10890 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D NQ541_12890 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D NQ541_04955 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D NQ541_02070 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D NQ541_03475 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D NQ541_01775 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D NQ541_01795 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:rlr03009] D NQ541_06725 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D NQ541_02305 era; GTPase Era K03595 era; GTPase D NQ541_05465 obgE; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-] D NQ541_06840 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA D NQ541_05120 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB D NQ541_10880 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D NQ541_05595 rRNA pseudouridine synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] D NQ541_03465 pseudouridine synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] D NQ541_11745 rsmA; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D NQ541_05625 rsmD; 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D NQ541_08920 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D NQ541_12855 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D NQ541_07505 rsmH; 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D NQ541_11155 rsmH; 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D NQ541_12255 rsmI; 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D NQ541_05145 TlyA family RNA methyltransferase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D NQ541_04565 rlmB; 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D NQ541_06605 rlmH; 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D NQ541_01915 class I SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D NQ541_09790 rlmN; 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D NQ541_00525 rlmD; 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D NQ541_05420 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D NQ541_09045 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D NQ541_10375 rluF; 23S rRNA pseudouridine(2604) synthase RluF K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21] D NQ541_08365 rimM; ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM D NQ541_06960 rimO; 30S ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4] D NQ541_08925 prmA; 50S ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] D NQ541_08890 ruvX; Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D NQ541_04560 ribonuclease III K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-] D NQ541_09775 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D NQ541_07060 der; ribosome biogenesis GTPase Der K03977 engA; GTPase D NQ541_08345 ylqF; ribosome biogenesis GTPase YlqF K14540 rbgA; ribosome biogenesis GTPase A D NQ541_02200 hflX; GTPase HflX K03665 hflX; GTPase D NQ541_12395 L-threonylcarbamoyladenylate synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D NQ541_09150 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D NQ541_06820 rbfA; 30S ribosome-binding factor RbfA K02834 rbfA; ribosome-binding factor A D NQ541_06845 ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP D NQ541_00015 RNA-binding S4 domain-containing protein K14761 rlbA; ribosome-associated protein D NQ541_05445 rsfS; ribosome silencing factor K09710 ybeB; ribosome-associated protein D NQ541_06570 ybeY; rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor D NQ541_05460 yhbY; ribosome assembly RNA-binding protein YhbY K07574 yhbY; RNA-binding protein D NQ541_08190 raiA; ribosome-associated translation inhibitor RaiA K05808 hpf; ribosome hibernation promoting factor D NQ541_09745 ychF; redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase D NQ541_06745 DUF177 domain-containing protein K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:rlr03016] D NQ541_01750 ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11] D NQ541_03755 MBL fold metallo-hydrolase K00784 rnz; ribonuclease Z [EC:3.1.26.11] D NQ541_11935 CCA tRNA nucleotidyltransferase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] D NQ541_07335 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D NQ541_10740 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D NQ541_12465 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D NQ541_03885 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D NQ541_00895 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D NQ541_04630 glutamine--tRNA ligase/YqeY domain fusion protein K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D NQ541_08775 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D NQ541_11680 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D NQ541_09130 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D NQ541_05195 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D NQ541_11950 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D NQ541_02460 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D NQ541_05260 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D NQ541_12830 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D NQ541_04555 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D NQ541_02230 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D NQ541_09135 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D NQ541_03610 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D NQ541_03615 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D NQ541_09885 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D NQ541_02165 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D NQ541_04580 dtd; D-aminoacyl-tRNA deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D NQ541_00105 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D NQ541_10900 trmB; tRNA (guanosine(46)-N7)-methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D NQ541_01650 truA; tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D NQ541_09950 truA; tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D NQ541_06810 truB; tRNA pseudouridine(55) synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D NQ541_07265 nifS; cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D NQ541_08915 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D NQ541_12395 L-threonylcarbamoyladenylate synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D NQ541_05315 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D NQ541_12865 mnmE; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D NQ541_12860 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D NQ541_12885 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D NQ541_10020 aspS; aspartate--tRNA(Asn) ligase K09759 aspC; nondiscriminating aspartyl-tRNA synthetase [EC:6.1.1.23] D NQ541_05495 ybaK; Cys-tRNA(Pro) deacylase K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-] D NQ541_11210 prolyl-tRNA synthetase associated domain-containing protein K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-] D NQ541_01435 tadA; tRNA adenosine(34) deaminase TadA K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D NQ541_11690 dusB; tRNA dihydrouridine synthase DusB K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D NQ541_06545 miaB; tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D NQ541_08900 mtaB; tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase MtaB K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5] D NQ541_08360 trmD; tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D NQ541_01465 tRNA (cytidine(34)-2'-O)-methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D NQ541_07255 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D NQ541_08415 tRNA 2-thiocytidine biosynthesis TtcA family protein K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA D NQ541_03620 queA; tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D NQ541_06325 queC; 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D NQ541_06340 queD; 6-carboxytetrahydropterin synthase QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D NQ541_06335 queE; putative 7-carboxy-7-deazaguanine synthase QueE K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D NQ541_06320 queF; preQ(1) synthase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D NQ541_03555 epoxyqueuosine reductase QueH K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6] D NQ541_05030 tgt; tRNA guanosine(34) transglycosylase Tgt K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D NQ541_08910 thiI; tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D NQ541_01755 tsaD; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D NQ541_01735 tsaE; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D NQ541_01470 tRNA threonylcarbamoyladenosine dehydratase K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase D NQ541_06765 nucleotidyltransferase family protein K27343 tmcAL; tRNA(Met) cytidine acetate ligase [EC:6.3.4.-] D NQ541_09635 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D NQ541_05065 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D NQ541_00745 type II toxin-antitoxin system VapC family toxin K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] D NQ541_02405 PIN domain-containing protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] C 03012 Translation factors [BR:rlr03012] D NQ541_06825 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D NQ541_04950 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D NQ541_06700 abc-f; ABC-F type ribosomal protection protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3 D NQ541_08680 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts D NQ541_10720 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D NQ541_03825 elongation factor G K02355 fusA; elongation factor G D NQ541_10725 fusA; elongation factor G K02355 fusA; elongation factor G D NQ541_04355 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D NQ541_08475 frr; ribosome recycling factor K02838 frr; ribosome recycling factor D NQ541_07425 pth; aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D NQ541_02065 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D NQ541_08800 efp; elongation factor P K02356 efp; elongation factor P D NQ541_05110 peptide chain release factor 3 K02837 prfC; peptide chain release factor 3 C 03110 Chaperones and folding catalysts [BR:rlr03110] D NQ541_09830 clpB; ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D NQ541_02825 ATP-dependent Clp protease ATP-binding subunit K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC D NQ541_08100 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D NQ541_10365 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D NQ541_10410 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG D NQ541_04090 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D NQ541_08825 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D NQ541_04095 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D NQ541_09005 hslO; Hsp33 family molecular chaperone HslO K04083 hslO; molecular chaperone Hsp33 D NQ541_00410 Hsp20/alpha crystallin family protein K13993 HSP20; HSP20 family protein D NQ541_08830 co-chaperone GroES K04078 groES; chaperonin GroES D NQ541_05215 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D NQ541_08220 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D NQ541_11880 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D NQ541_10415 peptidylprolyl isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D NQ541_10095 trxA; thioredoxin K03671 TXN; thioredoxin C 04131 Membrane trafficking [BR:rlr04131] D NQ541_07245 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D NQ541_03925 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D NQ541_10410 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG C 04121 Ubiquitin system C 03051 Proteasome [BR:rlr03051] D NQ541_10410 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG C 03032 DNA replication proteins [BR:rlr03032] D NQ541_07030 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D NQ541_00815 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D NQ541_06055 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D NQ541_11925 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D NQ541_00005 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D NQ541_00465 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D NQ541_10785 ATP-binding protein K02315 dnaC; DNA replication protein DnaC D NQ541_04980 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D NQ541_00445 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D NQ541_10990 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D NQ541_04390 PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D NQ541_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D NQ541_12270 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D NQ541_00150 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D NQ541_08335 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D NQ541_07160 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D NQ541_10370 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D NQ541_10685 Dam family site-specific DNA-(adenine-N6)-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D NQ541_00030 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D NQ541_06850 DNA topoisomerase 4 subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D NQ541_00025 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D NQ541_06855 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D NQ541_08845 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D NQ541_07100 DNA topoisomerase K03169 topB; DNA topoisomerase III [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:rlr03036] D NQ541_00815 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D NQ541_06055 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D NQ541_06725 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D NQ541_11925 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D NQ541_00005 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D NQ541_06720 smc; chromosome segregation protein SMC K03529 smc; chromosome segregation protein D NQ541_05820 segregation/condensation protein A K05896 scpA; segregation and condensation protein A D NQ541_05815 scpB; SMC-Scp complex subunit ScpB K06024 scpB; segregation and condensation protein B D NQ541_10040 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D NQ541_06660 DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D NQ541_07475 putative lipid II flippase FtsW K03588 ftsW; cell division protein FtsW D NQ541_10035 ftsX; permease-like cell division protein FtsX K09811 ftsX; cell division transport system permease protein D NQ541_07465 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D NQ541_05690 zapA; cell division protein ZapA K09888 zapA; cell division protein ZapA D NQ541_05365 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D NQ541_07780 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D NQ541_05345 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC D NQ541_06130 AAA family ATPase K03496 parA; chromosome partitioning protein D NQ541_07935 AAA family ATPase K03496 parA; chromosome partitioning protein D NQ541_12845 AAA family ATPase K03496 parA; chromosome partitioning protein D NQ541_12840 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D NQ541_07930 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D NQ541_12860 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D NQ541_12855 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D NQ541_12595 Fic family protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D NQ541_08090 yihA; ribosome biogenesis GTP-binding protein YihA/YsxC K03978 engB; GTP-binding protein D NQ541_01320 whiA; DNA-binding protein WhiA K09762 whiA; cell division protein WhiA C 03400 DNA repair and recombination proteins [BR:rlr03400] D NQ541_01830 methylated-DNA--[protein]-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D NQ541_09395 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D NQ541_10550 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D NQ541_04485 ATP-dependent DNA helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] D NQ541_06455 8-oxo-dGTP diphosphatase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D NQ541_06485 mutT; 8-oxo-dGTP diphosphatase MutT K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D NQ541_04870 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D NQ541_01655 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D NQ541_08780 deoxyribonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D NQ541_09155 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D NQ541_10370 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D NQ541_07160 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D NQ541_07785 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A D NQ541_07790 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B D NQ541_08215 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C D NQ541_03280 pcrA; DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D NQ541_10855 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D NQ541_10850 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D NQ541_02090 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D NQ541_06965 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D NQ541_07420 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D NQ541_05305 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D NQ541_00500 endonuclease MutS2 K07456 mutS2; DNA mismatch repair protein MutS2 D NQ541_05125 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D NQ541_05130 xseB; exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D NQ541_10990 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D NQ541_04390 PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D NQ541_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D NQ541_12270 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D NQ541_00150 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D NQ541_00445 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D NQ541_10685 Dam family site-specific DNA-(adenine-N6)-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D NQ541_06090 very short patch repair endonuclease K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-] D NQ541_07775 ATP-dependent RecD-like DNA helicase K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D NQ541_07300 recA; recombinase RecA K03553 recA; recombination protein RecA D NQ541_05700 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA D NQ541_05695 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D NQ541_09815 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D NQ541_04400 exonuclease SbcCD subunit D K03547 sbcD; DNA repair protein SbcD/Mre11 D NQ541_02835 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms D NQ541_00020 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF D NQ541_03090 putative DNA binding domain-containing protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D NQ541_05635 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D NQ541_00160 recR; recombination mediator RecR K06187 recR; recombination protein RecR D NQ541_05570 Holliday junction resolvase RecU K03700 recU; recombination protein U D NQ541_00030 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D NQ541_06850 DNA topoisomerase 4 subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D NQ541_00025 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D NQ541_06855 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D NQ541_08845 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D NQ541_11925 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D NQ541_09825 DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D NQ541_01590 DNA methylase K03502 umuC; DNA polymerase V D NQ541_05440 lexA; transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88] C 03029 Mitochondrial biogenesis [BR:rlr03029] D NQ541_06825 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D NQ541_04950 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D NQ541_08680 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts D NQ541_10720 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D NQ541_03825 elongation factor G K02355 fusA; elongation factor G D NQ541_10725 fusA; elongation factor G K02355 fusA; elongation factor G D NQ541_02305 era; GTPase Era K03595 era; GTPase D NQ541_09885 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D NQ541_03885 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D NQ541_09130 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D NQ541_02460 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D NQ541_08775 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D NQ541_10000 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D NQ541_09995 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D NQ541_10005 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D NQ541_00445 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D NQ541_04090 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D NQ541_08825 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D NQ541_08830 co-chaperone GroES K04078 groES; chaperonin GroES D NQ541_04095 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D NQ541_07265 nifS; cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D NQ541_08915 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D NQ541_12875 YidC/Oxa1 family membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase D NQ541_10410 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:rlr02000] D NQ541_02875 ABC transporter ATP-binding protein/permease K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-] D NQ541_02880 ABC transporter ATP-binding protein/permease K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-] D NQ541_02860 ABC transporter ATP-binding protein/permease K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D NQ541_03185 ABC transporter ATP-binding protein/permease K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D NQ541_08735 ABC transporter ATP-binding protein/permease K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D NQ541_02865 ABC transporter ATP-binding protein/permease K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D NQ541_03190 ABC transporter ATP-binding protein/permease K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D NQ541_08730 ABC transporter ATP-binding protein/permease K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D NQ541_08260 ABC transporter ATP-binding protein/permease K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D NQ541_06890 ABC-F family ATP-binding cassette domain-containing protein K15738 uup; ABC transport system ATP-binding/permease protein D NQ541_05005 extracellular solute-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein D NQ541_05010 ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein D NQ541_05015 ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D NQ541_03225 ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D NQ541_03550 ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D NQ541_10440 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D NQ541_12250 ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D NQ541_10580 sugar ABC transporter permease K10201 ngcF; N-acetylglucosamine transport system permease protein D NQ541_10575 carbohydrate ABC transporter permease K10202 ngcG; N-acetylglucosamine transport system permease protein D NQ541_10845 substrate-binding domain-containing protein K10540 mglB; methyl-galactoside transport system substrate-binding protein D NQ541_10835 galactoside ABC transporter permease K10541 mglC; methyl-galactoside transport system permease protein D NQ541_10840 sugar ABC transporter ATP-binding protein K10542 mglA; methyl-galactoside transport system ATP-binding protein [EC:7.5.2.11] D NQ541_01500 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein D NQ541_01505 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein D NQ541_01495 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein D NQ541_02785 substrate-binding domain-containing protein K02040 pstS; phosphate transport system substrate-binding protein D NQ541_02790 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein D NQ541_02795 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein D NQ541_02800 pstB; phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D NQ541_02125 transporter substrate-binding domain-containing protein K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein D NQ541_02130 amino acid ABC transporter permease K17077 artQ; arginine/lysine/histidine transport system permease protein D NQ541_02135 amino acid ABC transporter ATP-binding protein K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1] D NQ541_02965 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D NQ541_02970 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D NQ541_02975 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D NQ541_02980 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D NQ541_09610 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein D NQ541_09615 ABC transporter permease K02072 metI; D-methionine transport system permease protein D NQ541_09620 ATP-binding cassette domain-containing protein K02071 metN; D-methionine transport system ATP-binding protein D NQ541_09125 ABC transporter substrate-binding protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein D NQ541_09120 ABC transporter permease K05832 K05832; putative tryptophan/tyrosine transport system permease protein D NQ541_09115 ATP-binding cassette domain-containing protein K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein D NQ541_07370 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D NQ541_07365 amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D NQ541_11140 iron ABC transporter permease K25027 btuC; cobalamin transport system permease protein D NQ541_11135 ABC transporter ATP-binding protein K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8] D NQ541_09065 metal ABC transporter permease K09816 znuB; zinc transport system permease protein D NQ541_09070 metal ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D NQ541_09955 energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein D NQ541_09965 energy-coupling factor transporter ATPase K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D NQ541_09960 energy-coupling factor transporter ATPase K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D NQ541_04525 ABC transporter permease K09690 wzm; homopolymeric O-antigen transport system permease protein D NQ541_07635 ABC transporter permease K09690 wzm; homopolymeric O-antigen transport system permease protein D NQ541_04530 ABC transporter ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14] D NQ541_07630 ABC transporter ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14] D NQ541_11670 lantibiotic immunity ABC transporter MutE/EpiE family permease subunit K20491 nisE; lantibiotic transport system permease protein D NQ541_11665 lantibiotic immunity ABC transporter MutG family permease subunit K20492 nisG; lantibiotic transport system permease protein D NQ541_11675 lantibiotic protection ABC transporter ATP-binding protein K20490 nisF; lantibiotic transport system ATP-binding protein D NQ541_10235 ABC transporter permease K25151 gldF; gliding motility-associated transport system permease protein D NQ541_10240 ABC transporter ATP-binding protein K25152 gldA; gliding motility-associated transport system ATP-binding protein D NQ541_09290 ABC transporter ATP-binding protein K19083 braD; bacitracin transport system ATP-binding protein D NQ541_05285 ABC transporter permease K24948 yknZ; antimicrobial peptide resistance transport system permease protein D NQ541_05275 ABC transporter ATP-binding protein K24949 yknY; antimicrobial peptide resistance transport system ATP-binding protein [EC:7.6.2.-] D NQ541_10035 ftsX; permease-like cell division protein FtsX K09811 ftsX; cell division transport system permease protein D NQ541_10040 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D NQ541_01000 ATP-binding cassette domain-containing protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D NQ541_06315 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D NQ541_09360 ATP-binding cassette domain-containing protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D NQ541_04845 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D NQ541_08535 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D NQ541_09420 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D NQ541_09525 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D NQ541_10190 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D NQ541_12535 ATP-binding cassette domain-containing protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D NQ541_03035 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump D NQ541_01245 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump D NQ541_00395 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump D NQ541_02285 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump D NQ541_03015 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump D NQ541_11335 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump D NQ541_11165 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump D NQ541_08990 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump D NQ541_12125 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump D NQ541_06520 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump D NQ541_05290 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump D NQ541_01835 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump D NQ541_04595 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump D NQ541_08985 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump D NQ541_02930 MFS transporter K26745 ydiM_N; MFS transporter, AAHS family, multidrug transporter D NQ541_04470 ptsP; phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D NQ541_04465 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr D NQ541_07740 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr D NQ541_11420 glucose PTS transporter subunit IIA K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199] D NQ541_09895 nagE; N-acetylglucosamine-specific PTS transporter subunit IIBC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193] D NQ541_04460 fructose-specific PTS transporter subunit EIIC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D NQ541_08950 PTS N-acetylglucosamine transporter subunit IIBC K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D NQ541_08960 PTS sugar transporter subunit IIC K02795 manY; mannose PTS system EIIC component D NQ541_08955 PTS system mannose/fructose/sorbose family transporter subunit IID K02796 manZ; mannose PTS system EIID component D NQ541_11295 PTS sugar transporter subunit IIB K19507 gfrB; fructoselysine/glucoselysine PTS system EIIB component [EC:2.7.1.-] D NQ541_11290 PTS sugar transporter subunit IIC K19508 gfrC; fructoselysine/glucoselysine PTS system EIIC component D NQ541_11285 PTS system mannose/fructose/sorbose family transporter subunit IID K19509 gfrD; fructoselysine/glucoselysine PTS system EIID component D NQ541_12020 formate/nitrite transporter family protein K21993 fdhC; formate transporter D NQ541_08600 mscL; large conductance mechanosensitive channel protein MscL K03282 mscL; large conductance mechanosensitive channel D NQ541_06760 mgtE; magnesium transporter K06213 mgtE; magnesium transporter D NQ541_09035 mgtE; magnesium transporter K06213 mgtE; magnesium transporter D NQ541_08270 cobalt transporter K03284 corA; magnesium transporter D NQ541_01305 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D NQ541_03860 ZIP family metal transporter K07238 TC.ZIP; zinc transporter, ZIP family D NQ541_10320 calcium/sodium antiporter K07301 yrbG; cation:H+ antiporter D NQ541_00480 putP; sodium/proline symporter PutP K11928 putP; sodium/proline symporter D NQ541_06615 gltS; sodium/glutamate symporter K03312 gltS; glutamate:Na+ symporter, ESS family D NQ541_10355 cation:proton antiporter K26730 napA; Na+:H+ antiporter D NQ541_03835 TrkH family potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein D NQ541_11780 potassium transporter KtrB K03498 trkH; trk/ktr system potassium uptake protein D NQ541_03830 trkA; Trk system potassium transporter TrkA K03499 trkA; trk/ktr system potassium uptake protein D NQ541_11775 TrkA family potassium uptake protein K03499 trkA; trk/ktr system potassium uptake protein D NQ541_03965 uraA; uracil permease K02824 uraA; uracil permease D NQ541_03810 NCS2 family permease K06901 pbuG; adenine/guanine/hypoxanthine permease D NQ541_11175 chloride channel protein K03281 clcA; chloride channel protein, CIC family D NQ541_03990 chloride channel protein K03281 clcA; chloride channel protein, CIC family D NQ541_11225 chromate transporter K07240 chrA; chromate transporter D NQ541_01260 SulP family inorganic anion transporter K03321 TC.SULP; sulfate permease, SulP family D NQ541_09220 Na/Pi cotransporter family protein K03324 yjbB; phosphate:Na+ symporter D NQ541_06565 polysaccharide biosynthesis protein K06409 spoVB; stage V sporulation protein B D NQ541_08740 AEC family transporter K24180 mleP; malate permease and related proteins D NQ541_08715 AzlC family ABC transporter permease K26605 azlC; branched chain amino acid efflux pump D NQ541_08720 branched-chain amino acid transporter permease K26606 azlD; branched chain amino acid efflux pump D NQ541_09345 ECF transporter S component K23675 fmnP; riboflavin transporter D NQ541_04145 queuosine precursor transporter K09125 yhhQ; queuosine precursor transporter D NQ541_07475 putative lipid II flippase FtsW K03588 ftsW; cell division protein FtsW D NQ541_09250 sodium-translocating pyrophosphatase K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1] D NQ541_05785 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D NQ541_05780 oxaloacetate decarboxylase subunit alpha K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2] D NQ541_05800 carboxyl transferase K01604 mmdA; methylmalonyl-CoA decarboxylase subunit alpha [EC:7.2.4.3] D NQ541_05790 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma D NQ541_04180 ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A D NQ541_04185 ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A D NQ541_04190 feoB; ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B D NQ541_00400 feoB; ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B C 02044 Secretion system [BR:rlr02044] D NQ541_00050 ATPase, T2SS/T4P/T4SS family K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D NQ541_12385 dCMP deaminase family protein K01493 comEB; dCMP deaminase [EC:3.5.4.12] D NQ541_08140 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D NQ541_09160 protein translocase subunit SecDF K12257 secDF; SecD/SecF fusion protein D NQ541_09640 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D NQ541_02050 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D NQ541_08380 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D NQ541_06715 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D NQ541_05035 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D NQ541_12875 YidC/Oxa1 family membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase C 02042 Bacterial toxins [BR:rlr02042] D NQ541_01305 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D NQ541_01615 hemolysin III family protein K11068 hlyIII; hemolysin III C 02022 Two-component system [BR:rlr02022] D NQ541_02810 response regulator transcription factor K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP D NQ541_10800 response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D NQ541_09415 response regulator transcription factor K07775 resD; two-component system, OmpR family, response regulator ResD D NQ541_09300 response regulator transcription factor K19082 braR; two-component system, OmpR family, response regulator protein BraR/BceR D NQ541_11655 HAMP domain-containing histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3] D NQ541_11660 response regulator transcription factor K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR D NQ541_06405 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator D NQ541_12630 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator D NQ541_05170 spo0A; sporulation transcription factor Spo0A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A C 02035 Bacterial motility proteins [BR:rlr02035] D NQ541_00050 ATPase, T2SS/T4P/T4SS family K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:rlr04812] D NQ541_07780 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D NQ541_07465 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D NQ541_05365 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D NQ541_06130 AAA family ATPase K03496 parA; chromosome partitioning protein D NQ541_07935 AAA family ATPase K03496 parA; chromosome partitioning protein D NQ541_12845 AAA family ATPase K03496 parA; chromosome partitioning protein D NQ541_12840 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D NQ541_07930 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:rlr04147] D NQ541_10410 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG D NQ541_04255 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D NQ541_07245 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D NQ541_07240 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D NQ541_03925 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D NQ541_03960 dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D NQ541_08825 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D NQ541_04090 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D NQ541_00355 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D NQ541_08820 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D NQ541_10720 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D NQ541_00105 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D NQ541_04165 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D NQ541_11220 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D NQ541_02055 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D NQ541_03560 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D NQ541_03980 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D NQ541_04295 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D NQ541_00910 glgB; 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D NQ541_01270 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30] D NQ541_01345 glutamine synthetase III K01915 glnA; glutamine synthetase [EC:6.3.1.2] D NQ541_01670 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D NQ541_05060 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D NQ541_01730 phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D NQ541_07235 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] C 02048 Prokaryotic defense system [BR:rlr02048] D NQ541_01550 cas2; CRISPR-associated endonuclease Cas2 K09951 cas2; CRISPR-associated protein Cas2 D NQ541_07990 cas2; CRISPR-associated endonuclease Cas2 K09951 cas2; CRISPR-associated protein Cas2 D NQ541_08045 CRISPR-associated helicase/endonuclease Cas3 K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] D NQ541_08010 cas4; CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] D NQ541_08015 cas7c; type I-C CRISPR-associated protein Cas7/Csd2 K19118 csd2; CRISPR-associated protein Csd2 D NQ541_08025 cas5c; type I-C CRISPR-associated protein Cas5c K19119 cas5d; CRISPR-associated protein Cas5d D NQ541_01540 cas9; type II CRISPR RNA-guided endonuclease Cas9 K09952 csn1; CRISPR-associated endonuclease Csn1 [EC:3.1.-.-] D NQ541_11445 HsdR family type I site-specific deoxyribonuclease K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D NQ541_11465 type I restriction-modification system subunit M K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D NQ541_10685 Dam family site-specific DNA-(adenine-N6)-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D NQ541_00815 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D NQ541_06055 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D NQ541_05990 HNH endonuclease K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-] D NQ541_06680 type II toxin-antitoxin system PemK/MazF family toxin K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D NQ541_08065 type II toxin-antitoxin system RelE/ParE family toxin K19092 parE1_3_4; toxin ParE1/3/4 D NQ541_11540 type II toxin-antitoxin system RelE/ParE family toxin K19092 parE1_3_4; toxin ParE1/3/4 D NQ541_11645 type II toxin-antitoxin system RelE/ParE family toxin K19092 parE1_3_4; toxin ParE1/3/4 D NQ541_00745 type II toxin-antitoxin system VapC family toxin K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] D NQ541_02405 PIN domain-containing protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] D NQ541_00740 antitoxin K18829 mvpT; antitoxin VapB D NQ541_07465 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D NQ541_07780 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D NQ541_07335 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D NQ541_07265 nifS; cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D NQ541_08915 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules C 01504 Antimicrobial resistance genes [BR:rlr01504] D NQ541_10205 TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein K18220 tetM; ribosomal protection tetracycline resistance protein D NQ541_07830 BlaR1 family beta-lactam sensor/signal transducer K02172 blaR1; bla regulator protein blaR1 D NQ541_07825 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:rlr00537] D NQ541_03960 dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:rlr03100] D NQ541_04510 tRNA-Met K14230 tRNA-Met; tRNA Met D NQ541_07535 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D NQ541_03475 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D NQ541_01775 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D NQ541_01795 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D NQ541_01445 ffs; signal recognition particle sRNA large type K01983 ffs; SRP RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D NQ541_12650 aldo/keto reductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346] D NQ541_10300 mgrA; L-glyceraldehyde 3-phosphate reductase K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-] D NQ541_04415 iorA; indolepyruvate ferredoxin oxidoreductase subunit alpha K00179 iorA; indolepyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.8] D NQ541_04420 indolepyruvate oxidoreductase subunit beta K00180 iorB; indolepyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.8] D NQ541_01535 dihydrodipicolinate reductase K25950 amdH; secondary-alkyl amine dehydrogenase [NAD(P)+] [EC:1.4.1.28] D NQ541_01205 saccharopine dehydrogenase family protein K27502 capadh; carboxyaminopropylagmatine dehydrogenase [EC:1.5.1.55] D NQ541_06635 sulfide/dihydroorotate dehydrogenase-like FAD/NAD-binding protein K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D NQ541_03875 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4] D NQ541_03215 pflA; pyruvate formate-lyase-activating protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D NQ541_09485 class I SAM-dependent RNA methyltransferase K07444 ypsC; putative N6-adenine-specific DNA methylase [EC:2.1.1.-] D NQ541_09590 sugar O-acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79] D NQ541_09565 N-acetyltransferase K03826 yiaC; putative acetyltransferase [EC:2.3.1.-] D NQ541_10565 gnpA; 1,3-beta-galactosyl-N-acetylhexosamine phosphorylase K15533 K15533; 1,3-beta-galactosyl-N-acetylhexosamine phosphorylase [EC:2.4.1.211] D NQ541_09735 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D NQ541_05640 DAK2 domain-containing protein K07030 fakA; fatty acid kinase [EC:2.7.2.18] D NQ541_04975 pap; polyphosphate:AMP phosphotransferase K23753 ppk2; AMP-polyphosphate phosphotransferase [EC:2.7.4.33] D NQ541_06050 DNA polymerase K02334 dpo; DNA polymerase bacteriophage-type [EC:2.7.7.7] D NQ541_07750 cdaA; diadenylate cyclase CdaA K18672 dacA; diadenylate cyclase [EC:2.7.7.85] D NQ541_02260 spoIIAB; anti-sigma F factor K06379 spoIIAB; stage II sporulation protein AB (anti-sigma F factor) [EC:2.7.11.1] D NQ541_08210 hprK; HPr(Ser) kinase/phosphatase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-] D NQ541_08805 YqeG family HAD IIIA-type phosphatase K07015 yqeG; putative phosphatase [EC:3.1.3.-] D NQ541_00455 DHH family phosphoesterase K22927 gdpP; cyclic-di-AMP phosphodiesterase [EC:3.1.4.59] D NQ541_11750 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D NQ541_03490 endo-alpha-N-acetylgalactosaminidase family protein K17624 engCP; endo-alpha-N-acetylgalactosaminidase [EC:3.2.1.97] D NQ541_01575 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D NQ541_09810 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D NQ541_08520 pdaA; delta-lactam-biosynthetic de-N-acetylase K01567 pdaA; peptidoglycan-N-acetylmuramic acid deacetylase [EC:3.5.1.-] D NQ541_08995 RidA family protein K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10] D NQ541_07405 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D NQ541_03350 oleate hydratase K10254 ohyA; oleate hydratase [EC:4.2.1.53] D NQ541_01895 acetyl-CoA carboxylase carboxyl transferase subunit K04104 accD3; acyl-CoA carboxylase subunit beta [EC:6.4.1.-] D NQ541_05740 RnfABCDGE type electron transport complex subunit D K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2] D NQ541_05745 rsxC; electron transport complex subunit RsxC K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2] D NQ541_05720 RnfABCDGE type electron transport complex subunit B K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2] D NQ541_10285 heavy metal translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9] D NQ541_05210 cation-translocating P-type ATPase K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10] D NQ541_00265 heavy metal translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21] D NQ541_09855 heavy metal translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21] D NQ541_05220 cation-translocating P-type ATPase K12952 ctpE; cation-transporting P-type ATPase E [EC:7.2.2.-] C 99981 Carbohydrate metabolism D NQ541_01325 HPr family phosphocarrier protein K11184 chr; catabolite repression HPr-like protein D NQ541_11265 SIS domain-containing protein K19510 gfrF; fructoselysine-6-phosphate deglycase D NQ541_11280 SIS domain-containing protein K19510 gfrF; fructoselysine-6-phosphate deglycase C 99982 Energy metabolism D NQ541_05735 RnfABCDGE type electron transport complex subunit G K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G D NQ541_05730 electron transport complex subunit E K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E D NQ541_05725 RnfABCDGE type electron transport complex subunit A K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A D NQ541_07260 nifU; Fe-S cluster assembly scaffold protein NifU K04488 iscU; nitrogen fixation protein NifU and related proteins D NQ541_06415 4Fe-4S binding protein K02574 napH; ferredoxin-type protein NapH C 99983 Lipid metabolism D NQ541_03045 DegV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit D NQ541_07135 DegV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit C 99984 Nucleotide metabolism C 99985 Amino acid metabolism D NQ541_05400 YggS family pyridoxal phosphate-dependent enzyme K06997 yggS; PLP dependent protein C 99986 Glycan metabolism D NQ541_02315 flippase-like domain-containing protein K07027 K07027; glycosyltransferase 2 family protein C 99987 Cofactor metabolism C 99988 Secondary metabolism C 99999 Others B B 09192 Unclassified: genetic information processing C 99973 Transcription D NQ541_04445 cold shock domain-containing protein K03704 cspA; cold shock protein D NQ541_09040 RNA-binding transcriptional accessory protein K06959 tex; protein Tex C 99974 Translation D NQ541_07450 MBL fold metallo-hydrolase K07576 K07576; metallo-beta-lactamase family protein C 99975 Protein processing D NQ541_08110 tig; trigger factor K03545 tig; trigger factor D NQ541_09630 smpB; SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein D NQ541_08855 YifB family Mg chelatase-like AAA ATPase K07391 comM; magnesium chelatase family protein C 99976 Replication and repair D NQ541_10310 IS607 family transposase K07450 K07450; putative resolvase D NQ541_05335 radC; DNA repair protein RadC K03630 radC; DNA repair protein RadC D NQ541_08330 YraN family protein K07460 yraN; putative endonuclease D NQ541_12440 GIY-YIG nuclease family protein K07461 K07461; putative endonuclease D NQ541_08850 dprA; DNA-processing protein DprA K04096 smf; DNA processing protein D NQ541_01065 replication initiation factor domain-containing protein K07467 nicK; putative DNA relaxase D NQ541_04310 replication-associated recombination protein A K07478 ycaJ; putative ATPase D NQ541_06175 phage/plasmid primase, P4 family K06919 K06919; putative DNA primase/helicase D NQ541_06790 transposase K07483 K07483; transposase D NQ541_01160 transposase K07483 K07483; transposase D NQ541_03130 transposase K07483 K07483; transposase D NQ541_03340 transposase K07483 K07483; transposase D NQ541_04725 transposase K07483 K07483; transposase D NQ541_06250 helix-turn-helix domain-containing protein K07483 K07483; transposase D NQ541_07955 transposase K07483 K07483; transposase D NQ541_09755 helix-turn-helix domain-containing protein K07483 K07483; transposase D NQ541_10640 transposase K07483 K07483; transposase D NQ541_11980 helix-turn-helix domain-containing protein K07483 K07483; transposase D NQ541_00995 IS110 family transposase K07486 K07486; transposase D NQ541_02360 IS110 family transposase K07486 K07486; transposase D NQ541_02615 IS110 family transposase K07486 K07486; transposase D NQ541_11320 IS110 family transposase K07486 K07486; transposase D NQ541_11550 IS110 family transposase K07486 K07486; transposase D NQ541_02385 tnpA; IS200/IS605 family transposase K07491 rayT; REP-associated tyrosine transposase D NQ541_02390 tnpB; IS200/IS605 family element RNA-guided endonuclease TnpB K07496 K07496; putative transposase D NQ541_10305 transposase K07496 K07496; putative transposase D NQ541_01165 IS3 family transposase K07497 K07497; putative transposase D NQ541_03125 IS3 family transposase K07497 K07497; putative transposase D NQ541_03335 IS3 family transposase K07497 K07497; putative transposase D NQ541_04730 IS3 family transposase K07497 K07497; putative transposase D NQ541_04765 DDE-type integrase/transposase/recombinase K07497 K07497; putative transposase D NQ541_06240 DDE-type integrase/transposase/recombinase K07497 K07497; putative transposase D NQ541_07950 IS3 family transposase K07497 K07497; putative transposase D NQ541_10635 IS3 family transposase K07497 K07497; putative transposase D NQ541_12740 IS3 family transposase K07497 K07497; putative transposase D NQ541_09750 IS3 family transposase K07497 K07497; putative transposase D NQ541_11985 IS3 family transposase K07497 K07497; putative transposase D NQ541_12580 site-specific integrase K14059 int; integrase C 99979 Viral proteins C 99998 Others D NQ541_00155 YbaB/EbfC family nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D NQ541_08650 MFS transporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family D NQ541_07080 sodium/solute symporter K03307 TC.SSS; solute:Na+ symporter, SSS family D NQ541_00820 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family D NQ541_03535 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family D NQ541_01920 sodium:alanine symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D NQ541_03865 sodium:alanine symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D NQ541_10970 alanine:cation symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D NQ541_02435 bile acid:sodium symporter family protein K03453 TC.BASS; bile acid:Na+ symporter, BASS family D NQ541_11180 bile acid:sodium symporter family protein K03453 TC.BASS; bile acid:Na+ symporter, BASS family C 99978 Cell growth D NQ541_07545 spore coat protein CotJB K06333 cotJB; spore coat protein JB D NQ541_07550 manganese catalase family protein K06334 cotJC; spore coat protein JC D NQ541_12870 protein jag K06346 jag; spoIIIJ-associated protein D NQ541_12235 nucleoside recognition protein K06373 spmA; spore maturation protein A D NQ541_02255 anti-sigma factor antagonist K06378 spoIIAA; stage II sporulation protein AA (anti-sigma F factor antagonist) D NQ541_05070 spoIIIAA; stage III sporulation protein AA K06390 spoIIIAA; stage III sporulation protein AA D NQ541_05080 spoIIIAC; stage III sporulation protein AC K06392 spoIIIAC; stage III sporulation protein AC D NQ541_07045 spoIVA; stage IV sporulation protein A K06398 spoIVA; stage IV sporulation protein A D NQ541_00610 recombinase family protein K06400 spoIVCA; site-specific DNA recombinase D NQ541_04940 recombinase family protein K06400 spoIVCA; site-specific DNA recombinase D NQ541_09325 SpoVA/SpoVAEb family sporulation membrane protein K06405 spoVAC; stage V sporulation protein AC D NQ541_09320 stage V sporulation protein AD K06406 spoVAD; stage V sporulation protein AD D NQ541_09315 SpoVA/SpoVAEb family sporulation membrane protein K06407 spoVAE; stage V sporulation protein AE D NQ541_04875 spore germination protein K06408 spoVAF; stage V sporulation protein AF D NQ541_10760 spoVG; septation regulator SpoVG K06412 spoVG; stage V sporulation protein G D NQ541_05630 alpha/beta-type small acid-soluble spore protein K06421 sspD; small acid-soluble spore protein D (minor alpha/beta-type SASP) C 99993 Cell motility C 99995 Signaling proteins D NQ541_08185 typA; translational GTPase TypA K06207 typA; GTP-binding protein D NQ541_07145 ACT domain-containing protein K07166 K07166; ACT domain-containing protein D NQ541_06575 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins C 99992 Structural proteins C 99994 Others D NQ541_09890 copper homeostasis protein CutC K06201 cutC; copper homeostasis protein D NQ541_12745 hemerythrin family protein K07216 hr; hemerythrin D NQ541_12525 SdpI family protein K26996 sdpI; immunity protein, SdpI family B B 09194 Poorly characterized C 99996 General function prediction only C 99997 Function unknown D NQ541_09165 scfB; thioether cross-link-forming SCIFF peptide maturase K06871 K06871; uncharacterized protein D NQ541_06990 ATP-binding protein K06923 K06923; uncharacterized protein D NQ541_05855 ATP-binding protein K06926 K06926; uncharacterized protein D NQ541_00185 phosphohydrolase K06950 K06950; uncharacterized protein D NQ541_03795 HD domain-containing protein K06950 K06950; uncharacterized protein D NQ541_08370 KH domain-containing protein K06960 K06960; uncharacterized protein D NQ541_09800 zinc metallopeptidase K06973 K06973; uncharacterized protein D NQ541_10065 MMPL family transporter K07003 K07003; uncharacterized protein D NQ541_06595 pyridoxamine 5'-phosphate oxidase family protein K07005 K07005; uncharacterized protein D NQ541_02185 PTS sugar transporter subunit IIC K07035 K07035; uncharacterized protein D NQ541_12210 yfcE; phosphodiesterase K07095 K07095; uncharacterized protein D NQ541_12105 transcription repressor NadR K07105 K07105; uncharacterized protein D NQ541_10485 ATP-binding protein K07133 K07133; uncharacterized protein D NQ541_11410 ATP-binding protein K07133 K07133; uncharacterized protein D NQ541_12795 ATP-binding protein K07133 K07133; uncharacterized protein D NQ541_01480 ATP-binding protein K07133 K07133; uncharacterized protein D NQ541_05330 NAD(P)-binding protein K07137 K07137; uncharacterized protein D NQ541_08080 FAD-dependent oxidoreductase K07137 K07137; uncharacterized protein D NQ541_04320 TIGR01212 family radical SAM protein K07139 K07139; uncharacterized protein D NQ541_12880 yidD; membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein D NQ541_09265 GatB/YqeY domain-containing protein K09117 K09117; uncharacterized protein D NQ541_07140 PFL family protein K09157 K09157; uncharacterized protein D NQ541_05390 DUF378 domain-containing protein K09779 K09779; uncharacterized protein D NQ541_08385 YlxM family DNA-binding protein K09787 K09787; uncharacterized protein D NQ541_10995 S1-like domain-containing RNA-binding protein K00243 K00243; uncharacterized protein D NQ541_05475 ribosomal-processing cysteine protease Prp K07584 ysxB; uncharacterized protein D NQ541_06835 YlxR family protein K07742 ylxR; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 14, 2024