+E Ribosome biogenesis KO #

  Ribosome Biogenesis - Rhizobium leguminosarum bv. trifolii CB782

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AEukaryotic type B Sno RNPs C Box C/D snoRNPs C Box H/ACA snoRNPs B 90S particles C U3 small nucleolar RNA-associated proteins C Helicases C GTPase C RNase D RLEG12_16360 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] C Kinase C Other 90S particles B Pre-40S particles C Kinases C Export and cytoplasmic maturation factors C Other pre-40S particles B Pre-60S particles C Helicases C GTPases C RNases D RNase MRP C Kinases C Export and cytoplasmic maturation factors C 5-FMC complex C Ribosome quality control proteins C Other pre-60S particles B Other ribosome biogenesis factors C RLEG12_16365 GTPase Era K03595 era; GTPase C RLEG12_30950 obgE; GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-] # AProkaryotic type B Sno RNPs C Box C/D snoRNPs C Box H/ACA snoRNPs B rRNA transcription factors C RLEG12_21245 molecular chaperone DnaK K06204 dksA; RNA polymerase-binding transcription factor C RLEG12_31900 transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA C RLEG12_17005 transcription antitermination protein NusB K03625 nusB; transcription antitermination protein NusB C RLEG12_17705 nusG; transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG B rRNA modification factors C 16S rRNA modification factors D RLEG12_16655 16S rRNA methyltransferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D RLEG12_31170 MFS transporter K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D RLEG12_32880 MFS transporter K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D RLEG12_31860 methyltransferase K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172] D RLEG12_13785 DNA methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D RLEG12_13600 16S rRNA methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D RLEG12_31250 16S rRNA methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D RLEG12_24120 16S rRNA methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D RLEG12_32950 16S rRNA methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D RLEG12_14160 hemolysin K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] C 23S rRNA modification factors D RLEG12_17665 23S rRNA (guanosine-2'-O-)-methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D RLEG12_13530 23S rRNA methyltransferase K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] D RLEG12_31000 50S rRNA methyltransferase K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D RLEG12_11510 SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D RLEG12_16795 lactate dehydrogenase K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266] D RLEG12_30130 50S rRNA methyltransferase K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D RLEG12_14160 hemolysin K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D RLEG12_14155 RNA methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D RLEG12_13780 pseudouridylate synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D RLEG12_27230 pseudouridylate synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D RLEG12_20730 pseudouridine synthase K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D RLEG12_26715 ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] B ribosomal protein modification factors C RLEG12_11430 alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] C RLEG12_19095 acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] C RLEG12_14495 GCN5 family N-acetyltransferase K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267] C RLEG12_30280 16S rRNA-processing protein RimM K02860 rimM; 16S rRNA processing protein RimM C RLEG12_23980 ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] B rRNA processing factors C RLEG12_16360 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] C RLEG12_17600 ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12] C RLEG12_19040 Holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] B rRNA helicases C RLEG12_20430 helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] B GTPases C RLEG12_16365 GTPase Era K03595 era; GTPase C RLEG12_25475 GTP-binding protein Der K03977 engA; GTPase C RLEG12_30950 obgE; GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-] C RLEG12_19600 GTP-binding protein HflX K03665 hflX; GTPase B Other maturation factors C RLEG12_14105 translation factor Sua5 K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] C RLEG12_16335 GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] C RLEG12_31885 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A C RLEG12_31905 ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP C RLEG12_30995 hypothetical protein K09710 ybeB; ribosome-associated protein C RLEG12_11405 rRNA maturation factor K07042 ybeY; probable rRNA maturation factor C RLEG12_11570 hypothetical protein K05808 hpf; ribosome hibernation promoting factor C RLEG12_25065 ychF; GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase # ARelated small nucleolar RNAs B Box C/D snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for 2'-O-ribose methylation B Box H/ACA snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for pseudouridynation B Other snoRNA ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: August 22, 2025