+D GENES KO
#
KEGG Orthology (KO) - Rhodoferax mekongensis
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:rmk00010]
D RAN89_18070 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D RAN89_17795 pgi; (GenBank) glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RAN89_16825 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D RAN89_04075 fba; (GenBank) class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RAN89_15725 tpiA; (GenBank) triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D RAN89_03425 gap; (GenBank) type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RAN89_04060 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D RAN89_07760 gpmA; (GenBank) 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D RAN89_18125 histidine phosphatase family protein K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D RAN89_15385 eno; (GenBank) phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RAN89_04070 pyk; (GenBank) pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RAN89_13325 ppsA; (GenBank) phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D RAN89_10960 aceE; (GenBank) pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D RAN89_10965 aceF; (GenBank) dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D RAN89_10970 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RAN89_11195 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RAN89_04450 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D RAN89_15070 zinc-dependent alcohol dehydrogenase family protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D RAN89_08250 NAD(P)-dependent alcohol dehydrogenase K12957 ahr; alcohol/geraniol dehydrogenase (NADP+) [EC:1.1.1.2 1.1.1.183]
D RAN89_11155 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RAN89_04175 aldehyde dehydrogenase family protein K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D RAN89_10350 acs; (GenBank) acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RAN89_16785 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RAN89_01935 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D RAN89_02160 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D RAN89_11520 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RAN89_16600 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D RAN89_03685 D-hexose-6-phosphate mutarotase K01792 E5.1.3.15; glucose-6-phosphate 1-epimerase [EC:5.1.3.15]
D RAN89_02100 phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
C 00020 Citrate cycle (TCA cycle) [PATH:rmk00020]
D RAN89_09060 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D RAN89_15240 acnA; (GenBank) aconitate hydratase AcnA K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D RAN89_09110 acnB; (GenBank) bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D RAN89_14130 icd; (GenBank) NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D RAN89_14140 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D RAN89_11185 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D RAN89_11190 odhB; (GenBank) 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D RAN89_10970 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RAN89_11195 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RAN89_03765 sucD; (GenBank) succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D RAN89_03760 sucC; (GenBank) ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D RAN89_05770 acetyl-CoA hydrolase/transferase family protein K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D RAN89_09075 sdhA; (GenBank) succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D RAN89_09070 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D RAN89_09085 sdhC; (GenBank) succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D RAN89_09080 sdhD; (GenBank) succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D RAN89_10345 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D RAN89_09095 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D RAN89_02100 phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D RAN89_10960 aceE; (GenBank) pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D RAN89_10965 aceF; (GenBank) dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:rmk00030]
D RAN89_17795 pgi; (GenBank) glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RAN89_17805 zwf; (GenBank) glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D RAN89_00730 rpe; (GenBank) ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D RAN89_03420 tkt; (GenBank) transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RAN89_17800 tal; (GenBank) transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D RAN89_10810 rpiA; (GenBank) ribose-5-phosphate isomerase RpiA K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D RAN89_11750 ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D RAN89_11520 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RAN89_16600 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D RAN89_16515 phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN K05774 phnN; ribose 1,5-bisphosphokinase [EC:2.7.4.23]
D RAN89_17480 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D RAN89_16395 edd; (GenBank) phosphogluconate dehydratase K01690 edd; phosphogluconate dehydratase [EC:4.2.1.12]
D RAN89_16390 eda; (GenBank) bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D RAN89_14085 D-glycerate dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D RAN89_15570 gluconokinase K00851 idnK; gluconokinase [EC:2.7.1.12]
D RAN89_11085 sugar kinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D RAN89_16995 glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D RAN89_04075 fba; (GenBank) class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RAN89_16825 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
C 00040 Pentose and glucuronate interconversions [PATH:rmk00040]
D RAN89_15490 pectinesterase family protein K01184 E3.2.1.15; polygalacturonase [EC:3.2.1.15]
D RAN89_11095 D-galactonate dehydratase family protein K08323 rspA; mannonate dehydratase [EC:4.2.1.8]
D RAN89_11090 mannitol dehydrogenase family protein K00040 uxuB; fructuronate reductase [EC:1.1.1.57]
D RAN89_07400 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D RAN89_12475 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D RAN89_00730 rpe; (GenBank) ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D RAN89_06830 xylB; (GenBank) xylulokinase K00854 xylB; xylulokinase [EC:2.7.1.17]
D RAN89_06825 xylA; (GenBank) xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D RAN89_03955 rhaI; (GenBank) L-rhamnose catabolism isomerase K01820 rhaA; L-rhamnose isomerase / sugar isomerase [EC:5.3.1.14 5.3.1.-]
D RAN89_02405 mannitol dehydrogenase family protein K00007 dalD; D-arabinitol 4-dehydrogenase [EC:1.1.1.11]
D RAN89_01290 SDR family oxidoreductase K22185 xylB; D-xylose 1-dehydrogenase [EC:1.1.1.175]
D RAN89_02960 SDR family oxidoreductase K22185 xylB; D-xylose 1-dehydrogenase [EC:1.1.1.175]
D RAN89_01295 SMP-30/gluconolactonase/LRE family protein K14274 xylC; xylono-1,5-lactonase [EC:3.1.1.110]
D RAN89_02995 aldehyde dehydrogenase family protein K22187 xylA; alpha-ketoglutaric semialdehyde dehydrogenase [EC:1.2.1.-]
D RAN89_02410 SDR family oxidoreductase K00039 rbtD; ribitol 2-dehydrogenase [EC:1.1.1.56]
C 00051 Fructose and mannose metabolism [PATH:rmk00051]
D RAN89_09520 PfkB family carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D RAN89_07525 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D RAN89_07395 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D RAN89_16600 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D RAN89_07520 NDP-sugar synthase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D RAN89_07465 gmd; (GenBank) GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D RAN89_07460 GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D RAN89_11635 SDR family oxidoreductase K18333 E1.1.1.435; L-fucose dehydrogenase [EC:1.1.1.435]
D RAN89_11630 amidohydrolase family protein K07046 E3.1.1.120; L-fucono-1,5-lactonase [EC:3.1.1.120]
D RAN89_11625 L-fuconate dehydratase K18334 fucD; L-fuconate dehydratase [EC:4.2.1.68]
D RAN89_11600 SDR family oxidoreductase K18335 E1.1.1.434; 2-dehydro-3-deoxy-L-fuconate 4-dehydrogenase [EC:1.1.1.434]
D RAN89_11620 fumarylacetoacetate hydrolase family protein K18336 lra6; 2,4-didehydro-3-deoxy-L-rhamnonate hydrolase [EC:3.7.1.26]
D RAN89_03955 rhaI; (GenBank) L-rhamnose catabolism isomerase K01820 rhaA; L-rhamnose isomerase / sugar isomerase [EC:5.3.1.14 5.3.1.-]
D RAN89_16825 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D RAN89_06825 xylA; (GenBank) xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D RAN89_02405 mannitol dehydrogenase family protein K00007 dalD; D-arabinitol 4-dehydrogenase [EC:1.1.1.11]
D RAN89_04075 fba; (GenBank) class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RAN89_15725 tpiA; (GenBank) triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D RAN89_01500 PTS fructose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
C 00052 Galactose metabolism [PATH:rmk00052]
D RAN89_01935 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D RAN89_02160 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D RAN89_05140 galE; (GenBank) UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RAN89_07515 galE; (GenBank) UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RAN89_11520 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RAN89_16600 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D RAN89_18070 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D RAN89_03105 glycoside hydrolase family 2 TIM barrel-domain containing protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D RAN89_03095 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D RAN89_01280 2-dehydro-3-deoxygalactonokinase K00883 dgoK; 2-dehydro-3-deoxygalactonokinase [EC:2.7.1.58]
D RAN89_01275 2-dehydro-3-deoxy-6-phosphogalactonate aldolase K01631 dgoA; 2-dehydro-3-deoxyphosphogalactonate aldolase [EC:4.1.2.21]
D RAN89_01305 alpha-glucosidase family protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D RAN89_08310 alpha-glucosidase K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10]
C 00053 Ascorbate and aldarate metabolism [PATH:rmk00053]
D RAN89_07400 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D RAN89_12475 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D RAN89_05135 NAD-dependent epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D RAN89_11155 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RAN89_17005 gudD; (GenBank) glucarate dehydratase K01706 gudD; glucarate dehydratase [EC:4.2.1.40]
D RAN89_17050 garL; (GenBank) 2-dehydro-3-deoxyglucarate aldolase K01630 garL; 2-dehydro-3-deoxyglucarate aldolase [EC:4.1.2.20]
D RAN89_02955 IlvD/Edd family dehydratase K13875 araC; L-arabonate dehydrase [EC:4.2.1.25]
D RAN89_02985 dihydrodipicolinate synthase family protein K13876 araD; 2-keto-3-deoxy-L-arabinonate dehydratase [EC:4.2.1.43]
D RAN89_17045 garD; (GenBank) galactarate dehydratase K01708 garD; galactarate dehydratase [EC:4.2.1.42]
D RAN89_17015 NAD(P)-dependent oxidoreductase K18981 udh; uronate dehydrogenase [EC:1.1.1.203]
C 00500 Starch and sucrose metabolism [PATH:rmk00500]
D RAN89_01305 alpha-glucosidase family protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D RAN89_02245 GH1 family beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D RAN89_12440 rfbF; (GenBank) glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D RAN89_11525 glgC; (GenBank) glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D RAN89_11530 glgA; (GenBank) glycogen synthase GlgA K00703 glgA; starch synthase [EC:2.4.1.21]
D RAN89_11510 glgB; (GenBank) 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D RAN89_11535 glycogen/starch/alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D RAN89_08310 alpha-glucosidase K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10]
D RAN89_11515 glgX; (GenBank) glycogen debranching protein GlgX K01214 ISA; isoamylase [EC:3.2.1.68]
D RAN89_11520 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RAN89_16600 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D RAN89_18070 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D RAN89_17795 pgi; (GenBank) glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RAN89_09520 PfkB family carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00620 Pyruvate metabolism [PATH:rmk00620]
D RAN89_10350 acs; (GenBank) acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RAN89_16785 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RAN89_10960 aceE; (GenBank) pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D RAN89_10965 aceF; (GenBank) dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D RAN89_10970 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RAN89_11195 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RAN89_15070 zinc-dependent alcohol dehydrogenase family protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D RAN89_04450 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D RAN89_08250 NAD(P)-dependent alcohol dehydrogenase K12957 ahr; alcohol/geraniol dehydrogenase (NADP+) [EC:1.1.1.2 1.1.1.183]
D RAN89_04070 pyk; (GenBank) pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RAN89_10920 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D RAN89_05700 accB; (GenBank) acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D RAN89_05705 accC; (GenBank) acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D RAN89_08995 accD; (GenBank) acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D RAN89_11155 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RAN89_04175 aldehyde dehydrogenase family protein K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D RAN89_05770 acetyl-CoA hydrolase/transferase family protein K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D RAN89_08610 alpha-hydroxy acid oxidase K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3]
D RAN89_02720 FAD-linked oxidase C-terminal domain-containing protein K00102 LDHD; D-lactate dehydrogenase (cytochrome) [EC:1.1.2.4]
D RAN89_10695 VOC family protein K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D RAN89_16370 gloA; (GenBank) lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D RAN89_10165 gloB; (GenBank) hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D RAN89_18410 glyoxylate/hydroxypyruvate reductase A K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D RAN89_14085 D-glycerate dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D RAN89_03350 NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D RAN89_09095 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D RAN89_10345 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D RAN89_08755 ppc; (GenBank) phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D RAN89_02100 phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D RAN89_13325 ppsA; (GenBank) phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D RAN89_04550 malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9]
D RAN89_11405 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAN89_12915 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAN89_16235 acetyl-CoA C-acyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAN89_18400 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAN89_18475 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAN89_07600 leuA; (GenBank) 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D RAN89_10295 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D RAN89_12190 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:rmk00630]
D RAN89_13015 aceA; (GenBank) isocitrate lyase K01637 ICL; isocitrate/methylisocitrate lyase [EC:4.1.3.1 4.1.3.30]
D RAN89_04550 malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9]
D RAN89_09095 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D RAN89_09060 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D RAN89_15240 acnA; (GenBank) aconitate hydratase AcnA K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D RAN89_09110 acnB; (GenBank) bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D RAN89_10350 acs; (GenBank) acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RAN89_16785 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RAN89_11405 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAN89_12915 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAN89_16235 acetyl-CoA C-acyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAN89_18400 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAN89_18475 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAN89_12910 phbB; (GenBank) acetoacetyl-CoA reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D RAN89_10690 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3]
D RAN89_10685 acyl-CoA carboxylase subunit beta K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D RAN89_10675 scpA; (GenBank) methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D RAN89_01130 FAD-linked oxidase C-terminal domain-containing protein K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]
D RAN89_01925 glcE; (GenBank) glycolate oxidase subunit GlcE K11472 glcE; glycolate dehydrogenase FAD-binding subunit [EC:1.1.99.14]
D RAN89_01920 glcF; (GenBank) glycolate oxidase subunit GlcF K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14]
D RAN89_18410 glyoxylate/hydroxypyruvate reductase A K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D RAN89_14085 D-glycerate dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D RAN89_00720 phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D RAN89_08795 HAD-IA family hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D RAN89_00435 PLP-dependent aminotransferase family protein K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D RAN89_12685 PLP-dependent aminotransferase family protein K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D RAN89_06800 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RAN89_09575 glnA; (GenBank) type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RAN89_13020 type III glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RAN89_13050 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RAN89_10865 glyA; (GenBank) serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RAN89_09740 gcvP; (GenBank) aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D RAN89_09750 gcvT; (GenBank) glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D RAN89_10970 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RAN89_11195 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RAN89_09745 gcvH; (GenBank) glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D RAN89_09190 NAD(P)-dependent oxidoreductase K00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60]
D RAN89_17055 2-hydroxy-3-oxopropionate reductase K00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60]
D RAN89_16995 glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D RAN89_16390 eda; (GenBank) bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D RAN89_08010 fdhF; (GenBank) formate dehydrogenase subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D RAN89_08005 NAD(P)H-dependent oxidoreductase subunit E K22515 fdwB; formate dehydrogenase beta subunit [EC:1.17.1.9]
D RAN89_01065 purU; (GenBank) formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D RAN89_15145 hutG; (GenBank) N-formylglutamate deformylase K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68]
C 00640 Propanoate metabolism [PATH:rmk00640]
D RAN89_10350 acs; (GenBank) acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RAN89_16785 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RAN89_10970 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RAN89_11195 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RAN89_18465 acyl-CoA dehydrogenase family protein K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D RAN89_05795 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RAN89_11400 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D RAN89_10920 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D RAN89_05700 accB; (GenBank) acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D RAN89_05705 accC; (GenBank) acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D RAN89_08995 accD; (GenBank) acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D RAN89_10380 malonyl-CoA decarboxylase family protein K01578 MLYCD; malonyl-CoA decarboxylase [EC:4.1.1.9]
D RAN89_02185 aspartate aminotransferase family protein K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D RAN89_10690 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3]
D RAN89_10685 acyl-CoA carboxylase subunit beta K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D RAN89_10675 scpA; (GenBank) methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D RAN89_03760 sucC; (GenBank) ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D RAN89_03765 sucD; (GenBank) succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D RAN89_02190 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D RAN89_06785 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D RAN89_15240 acnA; (GenBank) aconitate hydratase AcnA K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D RAN89_09110 acnB; (GenBank) bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D RAN89_13015 aceA; (GenBank) isocitrate lyase K01637 ICL; isocitrate/methylisocitrate lyase [EC:4.1.3.1 4.1.3.30]
D RAN89_08355 methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3]
C 00650 Butanoate metabolism [PATH:rmk00650]
D RAN89_11405 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAN89_12915 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAN89_16235 acetyl-CoA C-acyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAN89_18400 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAN89_18475 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAN89_05270 3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase family protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D RAN89_12195 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D RAN89_11400 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D RAN89_05795 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RAN89_18465 acyl-CoA dehydrogenase family protein K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D RAN89_12920 phaC; (GenBank) class I poly(R)-hydroxyalkanoic acid synthase K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D RAN89_09670 phaZ; (GenBank) polyhydroxyalkanoate depolymerase K05973 phaZ; poly(3-hydroxybutyrate) depolymerase [EC:3.1.1.75]
D RAN89_10710 phaZ; (GenBank) polyhydroxyalkanoate depolymerase K05973 phaZ; poly(3-hydroxybutyrate) depolymerase [EC:3.1.1.75]
D RAN89_12910 phbB; (GenBank) acetoacetyl-CoA reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D RAN89_09075 sdhA; (GenBank) succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D RAN89_09070 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D RAN89_09085 sdhC; (GenBank) succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D RAN89_09080 sdhD; (GenBank) succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D RAN89_14605 gabT; (GenBank) 4-aminobutyrate--2-oxoglutarate transaminase K14268 davT; 5-aminovalerate/4-aminobutyrate aminotransferase [EC:2.6.1.48 2.6.1.19]
D RAN89_14635 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D RAN89_05770 acetyl-CoA hydrolase/transferase family protein K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D RAN89_12070 iron-containing alcohol dehydrogenase K00043 gbd; 4-hydroxybutyrate dehydrogenase [EC:1.1.1.61]
D RAN89_18375 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D RAN89_14670 CoA transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D RAN89_14665 CoA transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D RAN89_12615 3-hydroxybutyrate dehydrogenase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30]
D RAN89_10275 acetolactate synthase 3 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RAN89_13130 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RAN89_10280 ilvN; (GenBank) acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D RAN89_12190 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00660 C5-Branched dibasic acid metabolism [PATH:rmk00660]
D RAN89_10275 acetolactate synthase 3 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RAN89_13130 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RAN89_10280 ilvN; (GenBank) acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D RAN89_07905 CaiB/BaiF CoA-transferase family protein K18289 ict-P; itaconate CoA-transferase [EC:2.8.3.- 2.8.3.22]
D RAN89_03760 sucC; (GenBank) ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D RAN89_03765 sucD; (GenBank) succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D RAN89_09050 leuC; (GenBank) 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D RAN89_09040 leuD; (GenBank) 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D RAN89_09035 leuB; (GenBank) 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:rmk00562]
D RAN89_15855 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D RAN89_06755 iolG; (GenBank) inositol 2-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D RAN89_06775 iolE; (GenBank) myo-inosose-2 dehydratase K03335 iolE; inosose dehydratase [EC:4.2.1.44]
D RAN89_06770 iolD; (GenBank) 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) K03336 iolD; 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) [EC:3.7.1.22]
D RAN89_06780 iolB; (GenBank) 5-deoxy-glucuronate isomerase K03337 iolB; 5-deoxy-glucuronate isomerase [EC:5.3.1.30]
D RAN89_06765 iolC; (GenBank) 5-dehydro-2-deoxygluconokinase K03338 iolC; 5-dehydro-2-deoxygluconokinase [EC:2.7.1.92]
D RAN89_02190 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D RAN89_06785 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D RAN89_15725 tpiA; (GenBank) triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:rmk00190]
D RAN89_15710 NADH-quinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D RAN89_17640 NADH-quinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D RAN89_15705 NADH-quinone oxidoreductase subunit B family protein K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D RAN89_15700 NADH-quinone oxidoreductase subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D RAN89_15695 NADH-quinone oxidoreductase subunit D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D RAN89_15690 nuoE; (GenBank) NADH-quinone oxidoreductase subunit NuoE K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D RAN89_15685 nuoF; (GenBank) NADH-quinone oxidoreductase subunit NuoF K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D RAN89_15680 nuoG; (GenBank) NADH-quinone oxidoreductase subunit NuoG K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D RAN89_15675 nuoH; (GenBank) NADH-quinone oxidoreductase subunit NuoH K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D RAN89_15670 nuoI; (GenBank) NADH-quinone oxidoreductase subunit NuoI K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D RAN89_15665 NADH-quinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D RAN89_15660 nuoK; (GenBank) NADH-quinone oxidoreductase subunit NuoK K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D RAN89_15655 nuoL; (GenBank) NADH-quinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D RAN89_15650 NADH-quinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D RAN89_15645 nuoN; (GenBank) NADH-quinone oxidoreductase subunit NuoN K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D RAN89_09075 sdhA; (GenBank) succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D RAN89_09070 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D RAN89_09085 sdhC; (GenBank) succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D RAN89_09080 sdhD; (GenBank) succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D RAN89_07275 petA; (GenBank) ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D RAN89_07280 cytochrome bc complex cytochrome b subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D RAN89_07285 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D RAN89_06590 cyoE; (GenBank) heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
D RAN89_11035 cyoD; (GenBank) cytochrome o ubiquinol oxidase subunit IV K02300 cyoD; cytochrome o ubiquinol oxidase subunit IV
D RAN89_06565 cytochrome c oxidase subunit 3 K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D RAN89_06545 ctaD; (GenBank) cytochrome c oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D RAN89_06540 coxB; (GenBank) cytochrome c oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D RAN89_06555 cytochrome c oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D RAN89_06585 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D RAN89_10430 ccoN; (GenBank) cytochrome-c oxidase, cbb3-type subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D RAN89_10435 ccoO; (GenBank) cytochrome-c oxidase, cbb3-type subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D RAN89_10440 CcoQ/FixQ family Cbb3-type cytochrome c oxidase assembly chaperone K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D RAN89_10445 ccoP; (GenBank) cytochrome-c oxidase, cbb3-type subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D RAN89_11040 cyoC; (GenBank) cytochrome o ubiquinol oxidase subunit III K02299 cyoC; cytochrome o ubiquinol oxidase subunit III
D RAN89_11045 cyoB; (GenBank) cytochrome o ubiquinol oxidase subunit I K02298 cyoB; cytochrome o ubiquinol oxidase subunit I [EC:7.1.1.3]
D RAN89_11050 cyoA; (GenBank) ubiquinol oxidase subunit II K02297 cyoA; cytochrome o ubiquinol oxidase subunit II [EC:7.1.1.3]
D RAN89_04545 c-type cytochrome K08738 CYC; cytochrome c
D RAN89_08690 c-type cytochrome K08738 CYC; cytochrome c
D RAN89_10355 c-type cytochrome K08738 CYC; cytochrome c
D RAN89_01430 atpA; (GenBank) F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D RAN89_01420 atpD; (GenBank) F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D RAN89_01425 atpG; (GenBank) F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D RAN89_01435 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D RAN89_01415 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D RAN89_01440 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D RAN89_01445 atpE; (GenBank) F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D RAN89_10210 ppa; (GenBank) inorganic diphosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D RAN89_10020 ppk1; (GenBank) polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D RAN89_16230 ppk2; (GenBank) polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:rmk00710]
D RAN89_04060 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D RAN89_03425 gap; (GenBank) type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RAN89_04075 fba; (GenBank) class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RAN89_16825 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D RAN89_03420 tkt; (GenBank) transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RAN89_10810 rpiA; (GenBank) ribose-5-phosphate isomerase RpiA K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D RAN89_15725 tpiA; (GenBank) triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D RAN89_00730 rpe; (GenBank) ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D RAN89_17800 tal; (GenBank) transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D RAN89_08755 ppc; (GenBank) phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D RAN89_03350 NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D RAN89_09095 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
C 00720 Other carbon fixation pathways [PATH:rmk00720]
D RAN89_13325 ppsA; (GenBank) phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D RAN89_08755 ppc; (GenBank) phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D RAN89_09095 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D RAN89_10345 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D RAN89_09075 sdhA; (GenBank) succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D RAN89_09070 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D RAN89_09085 sdhC; (GenBank) succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D RAN89_09080 sdhD; (GenBank) succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D RAN89_03765 sucD; (GenBank) succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D RAN89_03760 sucC; (GenBank) ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D RAN89_11405 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAN89_12915 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAN89_16235 acetyl-CoA C-acyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAN89_18400 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAN89_18475 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAN89_14130 icd; (GenBank) NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D RAN89_14140 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D RAN89_15240 acnA; (GenBank) aconitate hydratase AcnA K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D RAN89_09110 acnB; (GenBank) bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D RAN89_10920 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D RAN89_05700 accB; (GenBank) acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D RAN89_05705 accC; (GenBank) acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D RAN89_08995 accD; (GenBank) acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D RAN89_07910 MaoC family dehydratase N-terminal domain-containing protein K09709 meh; 3-methylfumaryl-CoA hydratase [EC:4.2.1.153]
D RAN89_10675 scpA; (GenBank) methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D RAN89_10945 folD; (GenBank) bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D RAN89_18250 metF; (GenBank) methylenetetrahydrofolate reductase [NAD(P)H] K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D RAN89_10350 acs; (GenBank) acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RAN89_16785 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
C 00680 Methane metabolism [PATH:rmk00680]
D RAN89_04450 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D RAN89_01040 fghA; (GenBank) S-formylglutathione hydrolase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12]
D RAN89_08010 fdhF; (GenBank) formate dehydrogenase subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D RAN89_08005 NAD(P)H-dependent oxidoreductase subunit E K22515 fdwB; formate dehydrogenase beta subunit [EC:1.17.1.9]
D RAN89_10865 glyA; (GenBank) serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RAN89_16995 glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D RAN89_15385 eno; (GenBank) phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RAN89_08755 ppc; (GenBank) phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D RAN89_09095 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D RAN89_04075 fba; (GenBank) class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RAN89_16825 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D RAN89_10350 acs; (GenBank) acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RAN89_16785 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RAN89_13325 ppsA; (GenBank) phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D RAN89_07760 gpmA; (GenBank) 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D RAN89_18125 histidine phosphatase family protein K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D RAN89_14195 D-2-hydroxyacid dehydrogenase family protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D RAN89_09405 serC; (GenBank) 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D RAN89_12665 serB; (GenBank) phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 00910 Nitrogen metabolism [PATH:rmk00910]
D RAN89_03030 CmpA/NrtA family ABC transporter substrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D RAN89_15765 CmpA/NrtA family ABC transporter substrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D RAN89_03035 ntrB; (GenBank) nitrate ABC transporter permease K15577 nrtB; nitrate/nitrite transport system permease protein
D RAN89_15770 ntrB; (GenBank) nitrate ABC transporter permease K15577 nrtB; nitrate/nitrite transport system permease protein
D RAN89_03040 ABC transporter ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D RAN89_15775 ABC transporter ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D RAN89_15795 molybdopterin-dependent oxidoreductase K00372 nasC; assimilatory nitrate reductase catalytic subunit [EC:1.7.99.-]
D RAN89_15780 nirB; (GenBank) nitrite reductase large subunit NirB K26139 nasD; nitrite reductase [NAD(P)H] large subunit [EC:1.7.1.4]
D RAN89_15790 nirD; (GenBank) nitrite reductase small subunit NirD K26138 nasE; nitrite reductase [NAD(P)H] small subunit [EC:1.7.1.4]
D RAN89_10725 nitronate monooxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D RAN89_14830 nitronate monooxygenase family protein K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D RAN89_16245 nitronate monooxygenase family protein K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D RAN89_15625 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D RAN89_06800 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RAN89_09575 glnA; (GenBank) type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RAN89_13020 type III glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RAN89_13050 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RAN89_07100 glutamate synthase-related protein K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D RAN89_07105 glutamate synthase subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D RAN89_03045 cynS; (GenBank) cyanase K01725 cynS; cyanate lyase [EC:4.2.1.104]
D RAN89_18515 can; (GenBank) carbonate dehydratase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
D RAN89_18145 carbonic anhydrase family protein K01674 cah; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:rmk00920]
D RAN89_02620 sulfate ABC transporter substrate-binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D RAN89_02435 sulfate ABC transporter substrate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D RAN89_02625 cysT; (GenBank) sulfate ABC transporter permease subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D RAN89_02630 cysW; (GenBank) sulfate ABC transporter permease subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D RAN89_02635 sulfate ABC transporter ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D RAN89_02500 ssuE; (GenBank) NADPH-dependent FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
D RAN89_11685 GTP-binding protein K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D RAN89_11690 cysD; (GenBank) sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D RAN89_11695 phosphoadenylyl-sulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D RAN89_11705 nitrite/sulfite reductase K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
D RAN89_09295 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D RAN89_07425 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D RAN89_15845 cysE; (GenBank) serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D RAN89_05445 cysK; (GenBank) cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D RAN89_03275 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D RAN89_16655 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
D RAN89_12200 3-(methylthio)propionyl-CoA ligase K20034 dmdB; 3-(methylthio)propionyl---CoA ligase [EC:6.2.1.44]
D RAN89_05260 acyl-CoA dehydrogenase C-terminal domain-containing protein K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
D RAN89_14835 acyl-CoA dehydrogenase K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
D RAN89_01095 crotonase/enoyl-CoA hydratase family protein K20036 dmdD; (methylthio)acryloyl-CoA hydratase [EC:4.2.1.155]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:rmk00061]
D RAN89_10920 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D RAN89_05700 accB; (GenBank) acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D RAN89_05705 accC; (GenBank) acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D RAN89_08995 accD; (GenBank) acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D RAN89_08850 acpP; (GenBank) acyl carrier protein K02078 acpP; acyl carrier protein
D RAN89_08840 fabD; (GenBank) ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D RAN89_08835 beta-ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D RAN89_08855 fabF; (GenBank) beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D RAN89_08290 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RAN89_08845 fabG; (GenBank) 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RAN89_09885 fabZ; (GenBank) 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D RAN89_11885 fabI; (GenBank) enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D RAN89_04265 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D RAN89_05050 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D RAN89_05335 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D RAN89_06610 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D RAN89_08230 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:rmk00071]
D RAN89_11405 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAN89_12915 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAN89_16235 acetyl-CoA C-acyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAN89_18400 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAN89_18475 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAN89_05280 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D RAN89_12190 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D RAN89_11400 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D RAN89_05795 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RAN89_05270 3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase family protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D RAN89_12195 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D RAN89_18465 acyl-CoA dehydrogenase family protein K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D RAN89_05305 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D RAN89_14215 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D RAN89_11410 acyl-CoA dehydrogenase family protein K00255 ACADL; long-chain-acyl-CoA dehydrogenase [EC:1.3.8.8]
D RAN89_02255 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D RAN89_04265 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D RAN89_05050 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D RAN89_05335 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D RAN89_06610 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D RAN89_08230 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D RAN89_03355 FAD-dependent oxidoreductase K05297 rubB; rubredoxin---NAD+ reductase [EC:1.18.1.1]
D RAN89_04450 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D RAN89_15070 zinc-dependent alcohol dehydrogenase family protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D RAN89_11155 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis [PATH:rmk00073]
D RAN89_05130 SDR family oxidoreductase K28138 acrB; alcohol-forming fatty acyl-CoA reductase [EC:1.2.1.84]
D RAN89_05105 wax ester/triacylglycerol synthase family O-acyltransferase K00635 tgs; diacylglycerol O-acyltransferase / wax synthase [EC:2.3.1.20 2.3.1.75]
C 00074 Mycolic acid biosynthesis [PATH:rmk00074]
D RAN89_08915 acpS; (GenBank) holo-ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D RAN89_08850 acpP; (GenBank) acyl carrier protein K02078 acpP; acyl carrier protein
D RAN89_08840 fabD; (GenBank) ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:rmk00561]
D RAN89_16995 glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D RAN89_11155 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RAN89_04595 glpK; (GenBank) glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30]
D RAN89_08830 plsX; (GenBank) phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D RAN89_16760 plsY; (GenBank) glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D RAN89_05945 lysophospholipid acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D RAN89_09755 1-acylglycerol-3-phosphate O-acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D RAN89_18545 lysophospholipid acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D RAN89_10250 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D RAN89_05105 wax ester/triacylglycerol synthase family O-acyltransferase K00635 tgs; diacylglycerol O-acyltransferase / wax synthase [EC:2.3.1.20 2.3.1.75]
D RAN89_17900 triacylglycerol lipase K01046 lip; triacylglycerol lipase [EC:3.1.1.3]
D RAN89_10015 glycosyltransferase family 1 protein K27597 K27597; 1,2-diacylglycerol 3-alpha-glucosyltransferase/glucuronosyltransferase [EC:2.4.1.337 2.4.1.-]
D RAN89_03095 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
C 00564 Glycerophospholipid metabolism [PATH:rmk00564]
D RAN89_07780 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D RAN89_04605 glycerol-3-phosphate dehydrogenase/oxidase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D RAN89_16760 plsY; (GenBank) glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D RAN89_05945 lysophospholipid acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D RAN89_09755 1-acylglycerol-3-phosphate O-acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D RAN89_18545 lysophospholipid acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D RAN89_10250 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D RAN89_00560 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D RAN89_07635 ugpQ; (GenBank) glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D RAN89_15500 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D RAN89_05435 ethanolamine ammonia-lyase subunit EutB K03735 eutB; ethanolamine ammonia-lyase large subunit [EC:4.3.1.7]
D RAN89_05440 eutC; (GenBank) ethanolamine ammonia-lyase subunit EutC K03736 eutC; ethanolamine ammonia-lyase small subunit [EC:4.3.1.7]
D RAN89_05615 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D RAN89_09855 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D RAN89_10290 pssA; (GenBank) CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D RAN89_01075 asd; (GenBank) archaetidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D RAN89_06480 asd; (GenBank) archaetidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D RAN89_14050 pgsA; (GenBank) CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D RAN89_00835 phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27]
D RAN89_07715 clsB; (GenBank) cardiolipin synthase ClsB K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
C 00565 Ether lipid metabolism [PATH:rmk00565]
D RAN89_00560 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00600 Sphingolipid metabolism [PATH:rmk00600]
D RAN89_03105 glycoside hydrolase family 2 TIM barrel-domain containing protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D RAN89_03095 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
C 00590 Arachidonic acid metabolism
D RAN89_00560 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00591 Linoleic acid metabolism
D RAN89_00560 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00592 alpha-Linolenic acid metabolism [PATH:rmk00592]
D RAN89_00560 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D RAN89_05280 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D RAN89_12190 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids [PATH:rmk01040]
D RAN89_08435 fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D RAN89_11345 arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D RAN89_05360 acyl-CoA thioesterase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:rmk00230]
D RAN89_15635 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D RAN89_11520 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RAN89_16600 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D RAN89_17480 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D RAN89_16660 purF; (GenBank) amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D RAN89_12520 purD; (GenBank) phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D RAN89_08405 purN; (GenBank) phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D RAN89_01170 purT; (GenBank) formate-dependent phosphoribosylglycinamide formyltransferase K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21]
D RAN89_12255 purL; (GenBank) phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D RAN89_14980 purM; (GenBank) phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D RAN89_04125 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D RAN89_04120 purE; (GenBank) 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D RAN89_04080 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D RAN89_03845 purB; (GenBank) adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D RAN89_05865 purH; (GenBank) bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D RAN89_03205 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D RAN89_17915 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D RAN89_08215 ushA; (GenBank) bifunctional UDP-sugar hydrolase/5'-nucleotidase UshA K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D RAN89_13450 surE; (GenBank) 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D RAN89_16685 pyrimidine/purine nucleoside phosphorylase K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
D RAN89_12930 pgeF; (GenBank) peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D RAN89_11985 guaB; (GenBank) IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D RAN89_11245 ndk; (GenBank) nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D RAN89_17305 non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D RAN89_16980 xdhA; (GenBank) xanthine dehydrogenase small subunit K13481 xdhA; xanthine dehydrogenase small subunit [EC:1.17.1.4]
D RAN89_16985 xdhB; (GenBank) xanthine dehydrogenase molybdopterin binding subunit K13482 xdhB; xanthine dehydrogenase large subunit [EC:1.17.1.4]
D RAN89_11990 guaA; (GenBank) glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D RAN89_09195 GMP reductase K00364 guaC; GMP reductase [EC:1.7.1.7]
D RAN89_16930 guaD; (GenBank) guanine deaminase K01487 guaD; guanine deaminase [EC:3.5.4.3]
D RAN89_17330 gmk; (GenBank) guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D RAN89_05730 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D RAN89_05725 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D RAN89_07070 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D RAN89_17340 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D RAN89_10045 Ppx/GppA phosphatase family protein K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D RAN89_12605 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5]
D RAN89_03790 adenylate/guanylate cyclase domain-containing protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D RAN89_12015 adenylate/guanylate cyclase domain-containing protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D RAN89_11320 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D RAN89_16945 adenosine deaminase K21053 ade; adenine deaminase [EC:3.5.4.2]
D RAN89_14180 adk; (GenBank) adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D RAN89_16905 symmetrical bis(5'-nucleosyl)-tetraphosphatase K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41]
D RAN89_11685 GTP-binding protein K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D RAN89_11690 cysD; (GenBank) sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D RAN89_17085 uraH; (GenBank) hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
D RAN89_02870 aspartate/glutamate racemase family protein K16841 hpxA; allantoin racemase [EC:5.1.99.3]
D RAN89_17095 puuE; (GenBank) allantoinase PuuE K16842 hpxB; allantoinase [EC:3.5.2.5]
D RAN89_17250 ureC; (GenBank) urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D RAN89_17245 urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5]
D RAN89_17235 ureA; (GenBank) urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5]
D RAN89_04515
D RAN89_17100 uraD; (GenBank) 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
C 00240 Pyrimidine metabolism [PATH:rmk00240]
D RAN89_09920 carB; (GenBank) carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D RAN89_09910 carA; (GenBank) glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D RAN89_05935 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D RAN89_05390 pyrC; (GenBank) dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D RAN89_05940 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D RAN89_10805 quinone-dependent dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D RAN89_01755 pyrE; (GenBank) orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D RAN89_04155 pyrF; (GenBank) orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D RAN89_09840 pyrH; (GenBank) UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D RAN89_11245 ndk; (GenBank) nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D RAN89_12490 Maf family protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D RAN89_08980 DUF45 domain-containing protein K07043 upp; UTP pyrophosphatase [EC:3.6.1.-]
D RAN89_15375 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D RAN89_16000 udk; (GenBank) uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D RAN89_17915 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D RAN89_08215 ushA; (GenBank) bifunctional UDP-sugar hydrolase/5'-nucleotidase UshA K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D RAN89_13450 surE; (GenBank) 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D RAN89_16685 pyrimidine/purine nucleoside phosphorylase K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
D RAN89_12535 upp; (GenBank) uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D RAN89_05930 pyrR; (GenBank) bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D RAN89_11755 carbohydrate kinase family protein K16328 psuK; pseudouridine kinase [EC:2.7.1.83]
D RAN89_11760 pseudouridine-5'-phosphate glycosidase K16329 psuG; pseudouridylate synthase [EC:4.2.1.70]
D RAN89_12540 amidohydrolase family protein K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D RAN89_05730 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D RAN89_05725 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D RAN89_16920 dCMP deaminase family protein K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D RAN89_12040 tmk; (GenBank) dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D RAN89_15365 dut; (GenBank) dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D RAN89_12965 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D RAN89_09610 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D RAN89_02280 NAD(P)-dependent oxidoreductase K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1]
D RAN89_02285 preA; (GenBank) NAD-dependent dihydropyrimidine dehydrogenase subunit PreA K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1]
D RAN89_02290 hydA; (GenBank) dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D RAN89_02295 Zn-dependent hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D RAN89_17100 uraD; (GenBank) 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:rmk00250]
D RAN89_07925 nadB; (GenBank) L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D RAN89_14185 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D RAN89_05165 asnB; (GenBank) asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D RAN89_13275 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D RAN89_16690 argG; (GenBank) argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D RAN89_08735 argH; (GenBank) argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D RAN89_11320 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D RAN89_03845 purB; (GenBank) adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D RAN89_05935 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D RAN89_14605 gabT; (GenBank) 4-aminobutyrate--2-oxoglutarate transaminase K14268 davT; 5-aminovalerate/4-aminobutyrate aminotransferase [EC:2.6.1.48 2.6.1.19]
D RAN89_14635 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D RAN89_07100 glutamate synthase-related protein K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D RAN89_07105 glutamate synthase subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D RAN89_15625 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D RAN89_01215 L-glutamate gamma-semialdehyde dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D RAN89_06800 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RAN89_09575 glnA; (GenBank) type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RAN89_13020 type III glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RAN89_13050 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RAN89_09920 carB; (GenBank) carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D RAN89_09910 carA; (GenBank) glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D RAN89_15955 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D RAN89_03680 SIS domain-containing protein K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D RAN89_17960 glmS; (GenBank) glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D RAN89_16660 purF; (GenBank) amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:rmk00260]
D RAN89_11015 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RAN89_09030 asd; (GenBank) aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D RAN89_03480 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D RAN89_13270 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D RAN89_09235 homoserine kinase K02204 thrB2; homoserine kinase type II [EC:2.7.1.39]
D RAN89_13265 thrC; (GenBank) threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D RAN89_00685 ltaE; (GenBank) low-specificity L-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D RAN89_08730 low specificity L-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D RAN89_10865 glyA; (GenBank) serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RAN89_18410 glyoxylate/hydroxypyruvate reductase A K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D RAN89_14085 D-glycerate dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D RAN89_16995 glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D RAN89_07760 gpmA; (GenBank) 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D RAN89_18125 histidine phosphatase family protein K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D RAN89_14195 D-2-hydroxyacid dehydrogenase family protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D RAN89_09405 serC; (GenBank) 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D RAN89_12665 serB; (GenBank) phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D RAN89_09740 gcvP; (GenBank) aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D RAN89_09750 gcvT; (GenBank) glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D RAN89_10970 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RAN89_11195 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RAN89_09745 gcvH; (GenBank) glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D RAN89_10290 pssA; (GenBank) CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D RAN89_09730 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D RAN89_00460 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D RAN89_17840 ilvA; (GenBank) threonine ammonia-lyase, biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D RAN89_13205 pyridoxal-phosphate dependent enzyme K17989 SDS; L-serine/L-threonine ammonia-lyase [EC:4.3.1.17 4.3.1.19]
D RAN89_09005 trpA; (GenBank) tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D RAN89_09010 trpB; (GenBank) tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:rmk00270]
D RAN89_07425 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D RAN89_15845 cysE; (GenBank) serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D RAN89_05445 cysK; (GenBank) cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D RAN89_11330 PLP-dependent transferase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D RAN89_04540 mmuM; (GenBank) homocysteine S-methyltransferase K00547 mmuM; homocysteine S-methyltransferase [EC:2.1.1.10]
D RAN89_02055 metH; (GenBank) methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D RAN89_02070 homocysteine S-methyltransferase family protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D RAN89_16295 methionine synthase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D RAN89_06975 metK; (GenBank) methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D RAN89_04270 5'-methylthioadenosine/adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D RAN89_12930 pgeF; (GenBank) peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D RAN89_10720 amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D RAN89_16710 dcm; (GenBank) DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RAN89_18260 ahcY; (GenBank) adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D RAN89_11015 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RAN89_09030 asd; (GenBank) aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D RAN89_03480 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D RAN89_13270 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D RAN89_03275 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D RAN89_02485 O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D RAN89_09660 O-acetylhomoserine aminocarboxypropyltransferase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D RAN89_16655 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
D RAN89_01830 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RAN89_04370 gshA; (GenBank) glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D RAN89_16105 gshA; (GenBank) glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D RAN89_04385 gshB; (GenBank) glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D RAN89_09295 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D RAN89_09095 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D RAN89_09730 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D RAN89_13205 pyridoxal-phosphate dependent enzyme K17989 SDS; L-serine/L-threonine ammonia-lyase [EC:4.3.1.17 4.3.1.19]
D RAN89_08525 cysM; (GenBank) cysteine synthase CysM K12339 cysM; S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) [EC:2.5.1.144]
D RAN89_14195 D-2-hydroxyacid dehydrogenase family protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D RAN89_09405 serC; (GenBank) 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:rmk00280]
D RAN89_01830 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RAN89_10970 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RAN89_11195 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RAN89_18465 acyl-CoA dehydrogenase family protein K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D RAN89_05305 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D RAN89_14215 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D RAN89_18525 isovaleryl-CoA dehydrogenase K00253 IVD; isovaleryl-CoA dehydrogenase [EC:1.3.8.4]
D RAN89_05795 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RAN89_11400 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D RAN89_05280 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D RAN89_12190 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D RAN89_10690 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3]
D RAN89_10685 acyl-CoA carboxylase subunit beta K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D RAN89_10675 scpA; (GenBank) methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D RAN89_02190 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D RAN89_06785 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D RAN89_11155 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RAN89_10395 malonyl-CoA synthase K18661 matB; malonyl-CoA/methylmalonyl-CoA synthetase [EC:6.2.1.76 6.2.1.-]
D RAN89_02185 aspartate aminotransferase family protein K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D RAN89_18415 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha K01968 MCCC1; 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4]
D RAN89_18430 carboxyl transferase domain-containing protein K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4]
D RAN89_18375 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D RAN89_14670 CoA transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D RAN89_14665 CoA transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D RAN89_11405 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAN89_12915 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAN89_16235 acetyl-CoA C-acyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAN89_18400 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAN89_18475 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAN89_01250
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:rmk00290]
D RAN89_00460 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D RAN89_17840 ilvA; (GenBank) threonine ammonia-lyase, biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D RAN89_13205 pyridoxal-phosphate dependent enzyme K17989 SDS; L-serine/L-threonine ammonia-lyase [EC:4.3.1.17 4.3.1.19]
D RAN89_09050 leuC; (GenBank) 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D RAN89_09040 leuD; (GenBank) 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D RAN89_09035 leuB; (GenBank) 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D RAN89_10275 acetolactate synthase 3 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RAN89_13130 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RAN89_10280 ilvN; (GenBank) acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D RAN89_10285 ilvC; (GenBank) ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D RAN89_10365 ilvD; (GenBank) dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D RAN89_01830 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RAN89_13275 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D RAN89_07600 leuA; (GenBank) 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D RAN89_10295 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:rmk00300]
D RAN89_03480 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D RAN89_13270 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D RAN89_11015 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RAN89_09030 asd; (GenBank) aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D RAN89_13250 dapA; (GenBank) 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D RAN89_14575 dihydrodipicolinate synthase family protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D RAN89_15340 dapA; (GenBank) 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D RAN89_04310 dapB; (GenBank) 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D RAN89_12305 dapD; (GenBank) 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D RAN89_15015 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D RAN89_12300 dapC; (GenBank) succinyldiaminopimelate transaminase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
D RAN89_12315 dapE; (GenBank) succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D RAN89_05470 dapF; (GenBank) diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D RAN89_07020 lysA; (GenBank) diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D RAN89_00435 PLP-dependent aminotransferase family protein K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D RAN89_12685 PLP-dependent aminotransferase family protein K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D RAN89_05540 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D RAN89_05545 murF; (GenBank) UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:rmk00310]
D RAN89_11190 odhB; (GenBank) 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D RAN89_10970 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RAN89_11195 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RAN89_02255 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D RAN89_05795 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RAN89_11400 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D RAN89_11405 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAN89_12915 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAN89_16235 acetyl-CoA C-acyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAN89_18400 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAN89_18475 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAN89_02260 FAD-dependent oxidoreductase K00468 davB; lysine 2-monooxygenase [EC:1.13.12.2]
D RAN89_02265 carbon-nitrogen hydrolase family protein K01506 davA; 5-aminopentanamidase [EC:3.5.1.30]
D RAN89_14605 gabT; (GenBank) 4-aminobutyrate--2-oxoglutarate transaminase K14268 davT; 5-aminovalerate/4-aminobutyrate aminotransferase [EC:2.6.1.48 2.6.1.19]
D RAN89_14635 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D RAN89_02240 CaiB/BaiF CoA-transferase family protein K01041 gcdG; glutaryl-CoA transferase [EC:2.8.3.-]
D RAN89_11155 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RAN89_12190 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00220 Arginine biosynthesis [PATH:rmk00220]
D RAN89_15020 argF; (GenBank) ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D RAN89_16690 argG; (GenBank) argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D RAN89_08735 argH; (GenBank) argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D RAN89_01160 rocF; (GenBank) arginase K01476 rocF; arginase [EC:3.5.3.1]
D RAN89_04345 arginase K01476 rocF; arginase [EC:3.5.3.1]
D RAN89_17250 ureC; (GenBank) urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D RAN89_17245 urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5]
D RAN89_17235 ureA; (GenBank) urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5]
D RAN89_15955 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D RAN89_06800 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RAN89_09575 glnA; (GenBank) type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RAN89_13020 type III glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RAN89_13050 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RAN89_09920 carB; (GenBank) carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D RAN89_09910 carA; (GenBank) glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D RAN89_15625 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D RAN89_13275 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D RAN89_11805 argA; (GenBank) amino-acid N-acetyltransferase K14682 argAB; amino-acid N-acetyltransferase [EC:2.3.1.1]
D RAN89_07320 argJ; (GenBank) bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D RAN89_15755 GNAT family N-acetyltransferase K22476 K22476; N-acetylglutamate synthase [EC:2.3.1.1]
D RAN89_05235 argB; (GenBank) acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D RAN89_03755 argC; (GenBank) N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D RAN89_15015 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:rmk00330]
D RAN89_00515 creatininase family protein K01470 E3.5.2.10; creatinine amidohydrolase [EC:3.5.2.10]
D RAN89_12540 amidohydrolase family protein K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D RAN89_11880 arginine/lysine/ornithine decarboxylase K01584 adiA; arginine decarboxylase [EC:4.1.1.19]
D RAN89_13065 speB; (GenBank) agmatinase K01480 speB; agmatinase [EC:3.5.3.11]
D RAN89_13045 aspartate aminotransferase family protein K12256 spuC; putrescine---pyruvate transaminase [EC:2.6.1.113]
D RAN89_11155 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RAN89_14630 speB; (GenBank) agmatinase K12255 gbuA; guanidinobutyrase [EC:3.5.3.7]
D RAN89_11070 FAD-binding oxidoreductase K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-]
D RAN89_13060 FAD-binding oxidoreductase K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-]
D RAN89_11065 aldehyde dehydrogenase K09472 puuC; 4-(gamma-glutamylamino)butanal dehydrogenase [EC:1.2.1.99]
D RAN89_01160 rocF; (GenBank) arginase K01476 rocF; arginase [EC:3.5.3.1]
D RAN89_04345 arginase K01476 rocF; arginase [EC:3.5.3.1]
D RAN89_04590 proC; (GenBank) pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D RAN89_01215 L-glutamate gamma-semialdehyde dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D RAN89_04340 ornithine cyclodeaminase K01750 ocd; ornithine cyclodeaminase [EC:4.3.1.12]
D RAN89_07560 proB; (GenBank) glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D RAN89_04360 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00340 Histidine metabolism [PATH:rmk00340]
D RAN89_07155 hisG; (GenBank) ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D RAN89_11315 ATP phosphoribosyltransferase regulatory subunit K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit
D RAN89_07220 phosphoribosyl-ATP diphosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]
D RAN89_07215 hisI; (GenBank) phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D RAN89_07205 hisA; (GenBank) 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D RAN89_07200 hisH; (GenBank) imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D RAN89_07210 hisF; (GenBank) imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D RAN89_07195 hisB; (GenBank) imidazoleglycerol-phosphate dehydratase HisB K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D RAN89_07190 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RAN89_07160 hisD; (GenBank) histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D RAN89_15120 hutH; (GenBank) histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D RAN89_15125 hutU; (GenBank) urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49]
D RAN89_15140 hutI; (GenBank) imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7]
D RAN89_15150 formimidoylglutamate deiminase K05603 hutF; formimidoylglutamate deiminase [EC:3.5.3.13]
D RAN89_15145 hutG; (GenBank) N-formylglutamate deformylase K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68]
D RAN89_11155 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00350 Tyrosine metabolism [PATH:rmk00350]
D RAN89_07190 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RAN89_10720 amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D RAN89_13165 hppD; (GenBank) 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D RAN89_14720 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D RAN89_12935 maiA; (GenBank) maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2]
D RAN89_13155 fahA; (GenBank) fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
D RAN89_01045 fumarylacetoacetate hydrolase family protein K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2]
D RAN89_04450 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D RAN89_15070 zinc-dependent alcohol dehydrogenase family protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D RAN89_04815 Gfo/Idh/MocA family oxidoreductase K10219 ligC; 2-hydroxy-4-carboxymuconate semialdehyde hemiacetal dehydrogenase [EC:1.1.1.312]
D RAN89_03460 5-carboxymethyl-2-hydroxymuconate isomerase K01826 hpaF; 5-carboxymethyl-2-hydroxymuconate isomerase [EC:5.3.3.10]
D RAN89_14635 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D RAN89_12945 fumarylacetoacetate hydrolase family protein K16165 nagK; fumarylpyruvate hydrolase [EC:3.7.1.20]
C 00360 Phenylalanine metabolism [PATH:rmk00360]
D RAN89_13150 phhA; (GenBank) phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
D RAN89_05800 enoyl-CoA hydratase-related protein K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18]
D RAN89_05795 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RAN89_07190 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RAN89_10720 amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D RAN89_13165 hppD; (GenBank) 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D RAN89_14720 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D RAN89_02175 D-amino acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D RAN89_09735 D-amino acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D RAN89_09825 FAD-dependent oxidoreductase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D RAN89_10600 D-amino acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D RAN89_17600 katG; (GenBank) catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21]
C 00380 Tryptophan metabolism [PATH:rmk00380]
D RAN89_15045 kynA; (GenBank) tryptophan 2,3-dioxygenase K00453 TDO2; tryptophan 2,3-dioxygenase [EC:1.13.11.11]
D RAN89_15040 kynU; (GenBank) kynureninase K01556 KYNU; kynureninase [EC:3.7.1.3]
D RAN89_11190 odhB; (GenBank) 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D RAN89_10970 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RAN89_11195 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RAN89_02255 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D RAN89_05795 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RAN89_11400 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D RAN89_11405 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAN89_12915 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAN89_16235 acetyl-CoA C-acyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAN89_18400 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAN89_18475 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAN89_11155 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RAN89_17600 katG; (GenBank) catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:rmk00400]
D RAN89_03050 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D RAN89_05675 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D RAN89_07065 aroB; (GenBank) 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D RAN89_06950 aroQ; (GenBank) type II 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D RAN89_14775 shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D RAN89_07060 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D RAN89_09390 bifunctional 3-phosphoshikimate 1-carboxyvinyltransferase/cytidylate kinase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D RAN89_09685 aroC; (GenBank) chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D RAN89_00700 chorismate-binding protein K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D RAN89_00690 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D RAN89_00675 trpD; (GenBank) anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D RAN89_09015 phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D RAN89_00670 trpC; (GenBank) indole-3-glycerol phosphate synthase TrpC K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D RAN89_09005 trpA; (GenBank) tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D RAN89_09010 trpB; (GenBank) tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D RAN89_09400 pheA; (GenBank) prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D RAN89_09395 prephenate dehydrogenase/arogenate dehydrogenase family protein K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D RAN89_07190 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RAN89_10720 amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D RAN89_13150 phhA; (GenBank) phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:rmk00410]
D RAN89_11155 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RAN89_07810 panC; (GenBank) pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D RAN89_02280 NAD(P)-dependent oxidoreductase K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1]
D RAN89_02285 preA; (GenBank) NAD-dependent dihydropyrimidine dehydrogenase subunit PreA K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1]
D RAN89_02290 hydA; (GenBank) dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D RAN89_02295 Zn-dependent hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D RAN89_17100 uraD; (GenBank) 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D RAN89_02185 aspartate aminotransferase family protein K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D RAN89_05795 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RAN89_11400 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D RAN89_18465 acyl-CoA dehydrogenase family protein K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D RAN89_10380 malonyl-CoA decarboxylase family protein K01578 MLYCD; malonyl-CoA decarboxylase [EC:4.1.1.9]
D RAN89_02190 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D RAN89_06785 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
C 00430 Taurine and hypotaurine metabolism
D RAN89_14755 gamma-glutamyltransferase family protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
C 00440 Phosphonate and phosphinate metabolism [PATH:rmk00440]
D RAN89_16540 carbon-phosphorus lyase complex subunit PhnI K06164 phnI; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI [EC:2.7.8.37]
D RAN89_16530 phnG; (GenBank) phosphonate C-P lyase system protein PhnG K06166 phnG; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnG [EC:2.7.8.37]
D RAN89_16535 phnH; (GenBank) phosphonate C-P lyase system protein PhnH K06165 phnH; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnH [EC:2.7.8.37]
D RAN89_16560 phnL; (GenBank) phosphonate C-P lyase system protein PhnL K05780 phnL; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnL [EC:2.7.8.37]
D RAN89_16565 alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase K06162 phnM; alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase [EC:3.6.1.63]
D RAN89_16545 alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase PhnJ K06163 phnJ; alpha-D-ribose 1-methylphosphonate 5-phosphate C-P lyase [EC:4.7.1.1]
C 00450 Selenocompound metabolism [PATH:rmk00450]
D RAN89_11330 PLP-dependent transferase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D RAN89_02055 metH; (GenBank) methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D RAN89_02070 homocysteine S-methyltransferase family protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D RAN89_16295 methionine synthase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D RAN89_08450 trxB; (GenBank) thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D RAN89_11675 NAD(P)/FAD-dependent oxidoreductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D RAN89_11685 GTP-binding protein K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D RAN89_11690 cysD; (GenBank) sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D RAN89_07940 metG; (GenBank) methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:rmk00460]
D RAN89_02245 GH1 family beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D RAN89_14755 gamma-glutamyltransferase family protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RAN89_14185 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D RAN89_10865 glyA; (GenBank) serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:rmk00470]
D RAN89_01885 alr; (GenBank) alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D RAN89_05575 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RAN89_15955 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D RAN89_10340 murI; (GenBank) glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D RAN89_05555 murD; (GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D RAN89_05470 dapF; (GenBank) diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D RAN89_07020 lysA; (GenBank) diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D RAN89_02175 D-amino acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D RAN89_09735 D-amino acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D RAN89_09825 FAD-dependent oxidoreductase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D RAN89_10600 D-amino acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
C 00480 Glutathione metabolism [PATH:rmk00480]
D RAN89_14755 gamma-glutamyltransferase family protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RAN89_04370 gshA; (GenBank) glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D RAN89_16105 gshA; (GenBank) glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D RAN89_04385 gshB; (GenBank) glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D RAN89_11850 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D RAN89_16820 pepN; (GenBank) aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D RAN89_00440 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RAN89_02800 gstA; (GenBank) glutathione transferase GstA K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RAN89_09675 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RAN89_15265 MAPEG family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RAN89_16010 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RAN89_18020 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RAN89_14130 icd; (GenBank) NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D RAN89_14140 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D RAN89_17805 zwf; (GenBank) glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D RAN89_01900 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D RAN89_02095 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D RAN89_01530 peroxiredoxin K24138 prx3; glutaredoxin/glutathione-dependent peroxiredoxin [EC:1.11.1.25 1.11.1.27]
D RAN89_03850
B
B 09107 Glycan biosynthesis and metabolism
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:rmk00520]
D RAN89_18210 anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D RAN89_09425 gph; (GenBank) phosphoglycolate phosphatase K22292 mupP; N-acetyl-D-muramate 6-phosphate phosphatase [EC:3.1.3.105]
D RAN89_03315 phosphotransferase K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221]
D RAN89_03395 nucleotidyltransferase family protein K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99]
D RAN89_17985 glmU; (GenBank) bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D RAN89_18310 murA; (GenBank) UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D RAN89_16740 murB; (GenBank) UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D RAN89_08920 nagZ; (GenBank) beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D RAN89_03610 nagA; (GenBank) N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D RAN89_03675 BadF/BadG/BcrA/BcrD ATPase family protein K18676 gspK; glucosamine kinase [EC:2.7.1.8]
D RAN89_09955 glmM; (GenBank) phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D RAN89_03680 SIS domain-containing protein K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D RAN89_17960 glmS; (GenBank) glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D RAN89_09520 PfkB family carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D RAN89_17795 pgi; (GenBank) glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RAN89_07525 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D RAN89_12470 SDR family oxidoreductase K08678 UXS1; UDP-glucuronate decarboxylase [EC:4.1.1.35]
D RAN89_05135 NAD-dependent epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D RAN89_18070 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D RAN89_11520 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RAN89_16600 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D RAN89_07400 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D RAN89_12475 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D RAN89_05140 galE; (GenBank) UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RAN89_07515 galE; (GenBank) UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RAN89_01500 PTS fructose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D RAN89_07395 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D RAN89_07520 NDP-sugar synthase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D RAN89_12440 rfbF; (GenBank) glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D RAN89_11525 glgC; (GenBank) glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D RAN89_07370 rfbA; (GenBank) glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
C 00541 Biosynthesis of various nucleotide sugars [PATH:rmk00541]
D RAN89_17985 glmU; (GenBank) bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D RAN89_05195 polysaccharide biosynthesis protein K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.115]
D RAN89_05200 NAD-dependent epimerase/dehydratase family protein K19068 wbjC; UDP-2-acetamido-2,6-beta-L-arabino-hexul-4-ose reductase [EC:1.1.1.367]
D RAN89_05205 wecB; (GenBank) UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K24258 wbjD; UDP-N-acetyl-L-fucosamine synthase [EC:5.1.3.28]
D RAN89_05230 nucleoside-diphosphate sugar epimerase/dehydratase K24300 wbpM; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135]
D RAN89_05215 SDR family oxidoreductase K24310 wbpV; UDP-N-acetyl-alpha-D-quinovosamine dehydrogenase [EC:1.1.1.426]
D RAN89_03215 KpsF/GutQ family sugar-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D RAN89_15380 kdsA; (GenBank) 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D RAN89_03220 HAD hydrolase family protein K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D RAN89_14175 kdsB; (GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D RAN89_01260 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D RAN89_05870 SIS domain-containing protein K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D RAN89_18550 gmhB; (GenBank) D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D RAN89_09365 rfaE1; (GenBank) D-glycero-beta-D-manno-heptose-7-phosphate kinase K21344 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase [EC:2.7.1.167]
D RAN89_03910 rfaE2; (GenBank) D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase K21345 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase [EC:2.7.7.70]
D RAN89_09360 rfaD; (GenBank) ADP-glyceromanno-heptose 6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D RAN89_07400 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D RAN89_12475 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D RAN89_12440 rfbF; (GenBank) glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D RAN89_12435 rfbG; (GenBank) CDP-glucose 4,6-dehydratase K01709 rfbG; CDP-glucose 4,6-dehydratase [EC:4.2.1.45]
D RAN89_08505 CDP-6-deoxy-delta-3,4-glucoseen reductase K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1]
D RAN89_07370 rfbA; (GenBank) glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RAN89_07380 rfbB; (GenBank) dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D RAN89_07365 rfbC; (GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D RAN89_12430 dTDP-4-dehydrorhamnose 3,5-epimerase family protein K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D RAN89_07375 rfbD; (GenBank) dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D RAN89_07520 NDP-sugar synthase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D RAN89_07525 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D RAN89_07465 gmd; (GenBank) GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D RAN89_07460 GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:rmk00511]
D RAN89_03105 glycoside hydrolase family 2 TIM barrel-domain containing protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
C 00540 Lipopolysaccharide biosynthesis [PATH:rmk00540]
D RAN89_09890 lpxA; (GenBank) acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D RAN89_05595 lpxC; (GenBank) UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D RAN89_10885 UDP-2,3-diacylglucosamine diphosphatase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D RAN89_09895 lpxB; (GenBank) lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D RAN89_14165 lpxK; (GenBank) tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D RAN89_16590 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D RAN89_06980 lysophospholipid acyltransferase family protein K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D RAN89_06985 lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D RAN89_16595 waaC; (GenBank) lipopolysaccharide heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D RAN89_01820 waaF; (GenBank) lipopolysaccharide heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
C 00542 O-Antigen repeat unit biosynthesis
C 00550 Peptidoglycan biosynthesis [PATH:rmk00550]
D RAN89_18310 murA; (GenBank) UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D RAN89_16740 murB; (GenBank) UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D RAN89_05570 murC; (GenBank) UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D RAN89_05555 murD; (GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D RAN89_05540 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D RAN89_05575 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RAN89_05545 murF; (GenBank) UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D RAN89_09850 uppS; (GenBank) polyprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D RAN89_15895 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D RAN89_05550 mraY; (GenBank) phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D RAN89_05565 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D RAN89_05625 mtgA; (GenBank) monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D RAN89_03405 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D RAN89_07030 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D RAN89_08620 pbpC; (GenBank) penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D RAN89_05560 ftsW; (GenBank) putative lipid II flippase FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D RAN89_05660 rodA; (GenBank) rod shape-determining protein RodA K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D RAN89_01715 mrdA; (GenBank) penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D RAN89_05535 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D RAN89_01610 D-alanyl-D-alanine carboxypeptidase family protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D RAN89_04135 dacB; (GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
C 00552 Teichoic acid biosynthesis [PATH:rmk00552]
D RAN89_15895 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D RAN89_07410 WecB/TagA/CpsF family glycosyltransferase K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D RAN89_05230 nucleoside-diphosphate sugar epimerase/dehydratase K24300 wbpM; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:rmk00543]
D RAN89_07425 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D RAN89_15845 cysE; (GenBank) serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:rmk00730]
D RAN89_18505 thiC; (GenBank) phosphomethylpyrimidine synthase ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D RAN89_05880 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D RAN89_18485 thiE; (GenBank) thiamine phosphate synthase K14153 thiDE; hydroxymethylpyrimidine kinase / phosphomethylpyrimidine kinase / thiamine-phosphate diphosphorylase [EC:2.7.1.49 2.7.4.7 2.5.1.3]
D RAN89_10740 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RAN89_13135 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RAN89_18500 FAD-dependent oxidoreductase K03153 thiO; glycine oxidase [EC:1.4.3.19]
D RAN89_09320 dxs; (GenBank) 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D RAN89_18490 thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10]
D RAN89_00745 thiL; (GenBank) thiamine-phosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D RAN89_09165 rsgA; (GenBank) ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D RAN89_14180 adk; (GenBank) adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:rmk00740]
D RAN89_14380 ribBA; (GenBank) bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D RAN89_10820 ribD; (GenBank) bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D RAN89_14305 HAD-IA family hydrolase K20862 yigB; FMN hydrolase / 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.102 3.1.3.104]
D RAN89_14385 ribH; (GenBank) 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D RAN89_10815 riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D RAN89_08345 bifunctional riboflavin kinase/FAD synthetase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D RAN89_02500 ssuE; (GenBank) NADPH-dependent FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
D RAN89_15635 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
C 00750 Vitamin B6 metabolism [PATH:rmk00750]
D RAN89_04990 pyridoxamine 5'-phosphate oxidase family protein K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D RAN89_16410 pdxH; (GenBank) pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D RAN89_09405 serC; (GenBank) 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D RAN89_07265 pdxA; (GenBank) 4-hydroxythreonine-4-phosphate dehydrogenase PdxA K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D RAN89_08910 pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D RAN89_13265 thrC; (GenBank) threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:rmk00760]
D RAN89_07925 nadB; (GenBank) L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D RAN89_07840 nadA; (GenBank) quinolinate synthase NadA K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D RAN89_07835 nadC; (GenBank) carboxylating nicotinate-nucleotide diphosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D RAN89_14090 pncB; (GenBank) nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D RAN89_17915 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D RAN89_08215 ushA; (GenBank) bifunctional UDP-sugar hydrolase/5'-nucleotidase UshA K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D RAN89_13450 surE; (GenBank) 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D RAN89_12505 nadD; (GenBank) nicotinate (nicotinamide) nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D RAN89_10240 NAD+ synthase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D RAN89_00840 CinA family protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D RAN89_17430 NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D RAN89_04250 Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D RAN89_04255 NAD(P) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D RAN89_04260 NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
D RAN89_14230 reverse transcriptase domain-containing protein K20170 nicA1; nicotine oxidoreductase
D RAN89_14635 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:rmk00770]
D RAN89_10275 acetolactate synthase 3 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RAN89_13130 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RAN89_10280 ilvN; (GenBank) acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D RAN89_10285 ilvC; (GenBank) ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D RAN89_10365 ilvD; (GenBank) dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D RAN89_07815 panB; (GenBank) 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D RAN89_07810 panC; (GenBank) pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D RAN89_04840 type III pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D RAN89_15370 coaBC; (GenBank) bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D RAN89_17510 coaD; (GenBank) pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D RAN89_07345 coaE; (GenBank) dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D RAN89_08915 acpS; (GenBank) holo-ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D RAN89_08935 4'-phosphopantetheinyl transferase superfamily protein K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-]
D RAN89_01830 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RAN89_02280 NAD(P)-dependent oxidoreductase K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1]
D RAN89_02285 preA; (GenBank) NAD-dependent dihydropyrimidine dehydrogenase subunit PreA K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1]
D RAN89_02290 hydA; (GenBank) dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D RAN89_02295 Zn-dependent hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D RAN89_17100 uraD; (GenBank) 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D RAN89_11155 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00780 Biotin metabolism [PATH:rmk00780]
D RAN89_06530 biotin synthase K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197]
D RAN89_08855 fabF; (GenBank) beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D RAN89_08290 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RAN89_08845 fabG; (GenBank) 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RAN89_09885 fabZ; (GenBank) 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D RAN89_11885 fabI; (GenBank) enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D RAN89_03720 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:rmk00785]
D RAN89_01465 lipB; (GenBank) lipoyl(octanoyl) transferase LipB K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D RAN89_01470 lipA; (GenBank) lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D RAN89_10970 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RAN89_11195 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RAN89_10960 aceE; (GenBank) pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D RAN89_10965 aceF; (GenBank) dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D RAN89_11185 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D RAN89_11190 odhB; (GenBank) 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D RAN89_09740 gcvP; (GenBank) aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D RAN89_09750 gcvT; (GenBank) glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D RAN89_09745 gcvH; (GenBank) glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:rmk00790]
D RAN89_07720 folE; (GenBank) GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D RAN89_12670 alkaline phosphatase D family protein K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D RAN89_07705 nudB; (GenBank) dihydroneopterin triphosphate diphosphatase K08310 nudB; dihydroneopterin triphosphate diphosphatase [EC:3.6.1.67]
D RAN89_18105 dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D RAN89_18110 dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D RAN89_14955 folK; (GenBank) 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D RAN89_09950 folP; (GenBank) dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D RAN89_09605 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D RAN89_16675 folC; (GenBank) bifunctional tetrahydrofolate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D RAN89_14380 ribBA; (GenBank) bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D RAN89_14505 pabB; (GenBank) aminodeoxychorismate synthase component I K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38]
D RAN89_16935 6-carboxytetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D RAN89_09170 4a-hydroxytetrahydrobiopterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D RAN89_13150 phhA; (GenBank) phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
D RAN89_16940 queE; (GenBank) 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D RAN89_13965 7-cyano-7-deazaguanine synthase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D RAN89_17930 queC; (GenBank) 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D RAN89_08575 queF; (GenBank) NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D RAN89_10180 moaA; (GenBank) GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D RAN89_08550 moaC; (GenBank) cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D RAN89_13245 molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D RAN89_15840 mog; (GenBank) molybdopterin adenylyltransferase K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D RAN89_08040 molybdopterin-binding protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D RAN89_13260 molybdopterin molybdotransferase MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D RAN89_16400 NTP transferase domain-containing protein K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76]
D RAN89_08035 mobA; (GenBank) molybdenum cofactor guanylyltransferase MobA K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:rmk00670]
D RAN89_09605 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D RAN89_10945 folD; (GenBank) bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D RAN89_10865 glyA; (GenBank) serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RAN89_08405 purN; (GenBank) phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D RAN89_05865 purH; (GenBank) bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D RAN89_09750 gcvT; (GenBank) glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D RAN89_02055 metH; (GenBank) methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D RAN89_02070 homocysteine S-methyltransferase family protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D RAN89_09610 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D RAN89_01065 purU; (GenBank) formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D RAN89_18250 metF; (GenBank) methylenetetrahydrofolate reductase [NAD(P)H] K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D RAN89_18000 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
D RAN89_04540 mmuM; (GenBank) homocysteine S-methyltransferase K00547 mmuM; homocysteine S-methyltransferase [EC:2.1.1.10]
D RAN89_06975 metK; (GenBank) methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D RAN89_18260 ahcY; (GenBank) adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D RAN89_09740 gcvP; (GenBank) aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D RAN89_10970 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RAN89_11195 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RAN89_09745 gcvH; (GenBank) glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:rmk00860]
D RAN89_16650 gltX; (GenBank) glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RAN89_07620 hemA; (GenBank) glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D RAN89_05875 hemL; (GenBank) glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D RAN89_06485 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D RAN89_06795 aspartate aminotransferase family protein K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D RAN89_01635 hemB; (GenBank) porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D RAN89_08760 hemC; (GenBank) hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D RAN89_08765 uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D RAN89_00535 hemE; (GenBank) uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D RAN89_12510 hemF; (GenBank) oxygen-dependent coproporphyrinogen oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D RAN89_10470 hemN; (GenBank) oxygen-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D RAN89_01630 CopD family protein K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-]
D RAN89_14315 hemH; (GenBank) ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D RAN89_08770 uroporphyrinogen-III C-methyltransferase K02496 hemX; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D RAN89_15805 cobA; (GenBank) uroporphyrinogen-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D RAN89_06590 cyoE; (GenBank) heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
D RAN89_06585 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D RAN89_11835 CbiX/SirB N-terminal domain-containing protein K03795 cbiX; sirohydrochlorin cobaltochelatase [EC:4.99.1.3]
D RAN89_12775 precorrin-2 C(20)-methyltransferase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151]
D RAN89_12765 cobG; (GenBank) precorrin-3B synthase K02229 cobG; precorrin-3B synthase [EC:1.14.13.83]
D RAN89_12780 cobJ; (GenBank) precorrin-3B C(17)-methyltransferase K05934 cobJ; precorrin-3B C17-methyltransferase / cobalt-factor III methyltransferase [EC:2.1.1.131 2.1.1.272]
D RAN89_12800 cobM; (GenBank) precorrin-4 C(11)-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271]
D RAN89_12795 cobalamin biosynthesis protein K02189 cbiG; cobalt-precorrin 5A hydrolase [EC:3.7.1.12]
D RAN89_12805 cobF; (GenBank) precorrin-6A synthase (deacetylating) K02228 cobF; precorrin-6A synthase [EC:2.1.1.152]
D RAN89_12785 cobalt-precorrin-6A reductase K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106]
D RAN89_12790 cbiE; (GenBank) precorrin-6y C5,15-methyltransferase (decarboxylating) subunit CbiE K00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase / cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196]
D RAN89_12770 precorrin-8X methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60]
D RAN89_12885 cobyrinate a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D RAN89_12840 cobN; (GenBank) cobaltochelatase subunit CobN K02230 cobN; cobaltochelatase CobN [EC:6.6.1.2]
D RAN89_02715 cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D RAN89_12865 cobO; (GenBank) cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D RAN89_12750 cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D RAN89_09160 cobalamin biosynthesis protein K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D RAN89_12760 cbiB; (GenBank) adenosylcobinamide-phosphate synthase CbiB K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D RAN89_12875 bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D RAN89_12740 adenosylcobinamide-GDP ribazoletransferase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D RAN89_12745 cobT; (GenBank) nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D RAN89_12735 histidine phosphatase family protein K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73]
D RAN89_12835 ATP-binding protein K03405 chlI; magnesium chelatase subunit I [EC:6.6.1.1]
D RAN89_02935 pyridoxamine 5'-phosphate oxidase family protein K07226 hutZ; heme oxygenase (biliverdin-IX-beta and delta-forming) [EC:1.14.99.58]
D RAN89_13350 bfr; (GenBank) bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:rmk00130]
D RAN89_00935 ubiA; (GenBank) 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D RAN89_09420 ubiG; (GenBank) bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
D RAN89_07670 ubiE; (GenBank) bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D RAN89_17825 coq7; (GenBank) 2-polyprenyl-3-methyl-6-methoxy-1,4-benzoquinone monooxygenase K06134 coq7; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60]
D RAN89_02705 hotdog fold thioesterase K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28]
D RAN89_14450 flavodoxin family protein K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D RAN89_15235 SDR family oxidoreductase K19267 qorB; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D RAN89_13165 hppD; (GenBank) 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D RAN89_14720 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:rmk00900]
D RAN89_09320 dxs; (GenBank) 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D RAN89_12655 ispD; (GenBank) 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D RAN89_17470 ispE; (GenBank) 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D RAN89_12650 ispF; (GenBank) 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D RAN89_11265 ispG; (GenBank) flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D RAN89_08135 ispH; (GenBank) 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D RAN89_11405 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAN89_12915 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAN89_16235 acetyl-CoA C-acyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAN89_18400 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAN89_18475 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAN89_09315 polyprenyl synthetase family protein K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D RAN89_07540 polyprenyl synthetase family protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D RAN89_09850 uppS; (GenBank) polyprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D RAN89_09175 M48 family metallopeptidase K06013 STE24; STE24 endopeptidase [EC:3.4.24.84]
D RAN89_12190 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis [PATH:rmk00906]
D RAN89_14290 hpnD; (GenBank) presqualene diphosphate synthase HpnD K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
D RAN89_11155 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00907 Pinene, camphor and geraniol degradation [PATH:rmk00907]
D RAN89_05795 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RAN89_11400 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D RAN89_08250 NAD(P)-dependent alcohol dehydrogenase K12957 ahr; alcohol/geraniol dehydrogenase (NADP+) [EC:1.1.1.2 1.1.1.183]
D RAN89_05300 SDR family oxidoreductase K13774 atuB; citronellol/citronellal dehydrogenase
D RAN89_17370 acyl-CoA dehydrogenase family protein K11731 atuD; citronellyl-CoA dehydrogenase [EC:1.3.99.-]
D RAN89_17360 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha K13777 atuF; geranyl-CoA carboxylase alpha subunit [EC:6.4.1.5]
D RAN89_17375 carboxyl transferase domain-containing protein K13778 atuC; geranyl-CoA carboxylase beta subunit [EC:6.4.1.5]
D RAN89_17365 enoyl-CoA hydratase-related protein K13779 atuE; isohexenylglutaconyl-CoA hydratase [EC:4.2.1.57]
D RAN89_18375 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D RAN89_05280 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D RAN89_12190 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D RAN89_03420 tkt; (GenBank) transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:rmk00523]
D RAN89_07370 rfbA; (GenBank) glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RAN89_07380 rfbB; (GenBank) dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D RAN89_07365 rfbC; (GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D RAN89_12430 dTDP-4-dehydrorhamnose 3,5-epimerase family protein K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D RAN89_07375 rfbD; (GenBank) dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
D RAN89_00695 chorismate mutase K04782 pchB; isochorismate pyruvate lyase [EC:4.2.99.21]
C 01055 Biosynthesis of vancomycin group antibiotics
D RAN89_07380 rfbB; (GenBank) dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:rmk00946]
D RAN89_02245 GH1 family beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
D RAN89_14300 penicillin acylase family protein K01434 pac; penicillin G amidase [EC:3.5.1.11]
C 00332 Carbapenem biosynthesis [PATH:rmk00332]
D RAN89_07560 proB; (GenBank) glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D RAN89_04360 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:rmk00261]
D RAN89_11685 GTP-binding protein K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D RAN89_11690 cysD; (GenBank) sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D RAN89_11015 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RAN89_09030 asd; (GenBank) aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D RAN89_13250 dapA; (GenBank) 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D RAN89_14575 dihydrodipicolinate synthase family protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D RAN89_15340 dapA; (GenBank) 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D RAN89_04310 dapB; (GenBank) 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:rmk00521]
D RAN89_18070 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D RAN89_11520 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RAN89_16600 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D RAN89_15855 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D RAN89_06755 iolG; (GenBank) inositol 2-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D RAN89_07370 rfbA; (GenBank) glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RAN89_07380 rfbB; (GenBank) dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D RAN89_07365 rfbC; (GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D RAN89_12430 dTDP-4-dehydrorhamnose 3,5-epimerase family protein K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D RAN89_07375 rfbD; (GenBank) dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D RAN89_18070 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:rmk00525]
D RAN89_07370 rfbA; (GenBank) glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RAN89_07380 rfbB; (GenBank) dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:rmk00401]
D RAN89_09395 prephenate dehydrogenase/arogenate dehydrogenase family protein K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D RAN89_07190 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RAN89_10720 amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D RAN89_00700 chorismate-binding protein K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D RAN89_00690 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D RAN89_08840 fabD; (GenBank) ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D RAN89_08290 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RAN89_08845 fabG; (GenBank) 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RAN89_11885 fabI; (GenBank) enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D RAN89_08850 acpP; (GenBank) acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:rmk00999]
D RAN89_06975 metK; (GenBank) methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D RAN89_14775 shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D RAN89_02245 GH1 family beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:rmk00362]
D RAN89_10560 Rieske 2Fe-2S domain-containing protein K05549 benA-xylX; benzoate/toluate 1,2-dioxygenase subunit alpha [EC:1.14.12.10 1.14.12.-]
D RAN89_10555 benB; (GenBank) benzoate 1,2-dioxygenase small subunit K05550 benB-xylY; benzoate/toluate 1,2-dioxygenase subunit beta [EC:1.14.12.10 1.14.12.-]
D RAN89_10550 benC; (GenBank) benzoate 1,2-dioxygenase electron transfer component BenC K05784 benC-xylZ; benzoate/toluate 1,2-dioxygenase reductase component [EC:1.18.1.-]
D RAN89_10545 benD; (GenBank) benzoate diol dehydrogenase BenD K05783 benD-xylL; dihydroxycyclohexadiene carboxylate dehydrogenase [EC:1.3.1.25 1.3.1.-]
D RAN89_10565 catA; (GenBank) catechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1]
D RAN89_10570 muconate/chloromuconate family cycloisomerase K01856 catB; muconate cycloisomerase [EC:5.5.1.1]
D RAN89_10510 catC; (GenBank) muconolactone Delta-isomerase K03464 catC; muconolactone D-isomerase [EC:5.3.3.4]
D RAN89_10515 pcaD; (GenBank) 3-oxoadipate enol-lactonase K01055 pcaD; 3-oxoadipate enol-lactonase [EC:3.1.1.24]
D RAN89_10585 3-oxoacid CoA-transferase subunit A K01031 pcaI; 3-oxoadipate CoA-transferase, alpha subunit [EC:2.8.3.6]
D RAN89_10590 3-oxoacid CoA-transferase subunit B K01032 pcaJ; 3-oxoadipate CoA-transferase, beta subunit [EC:2.8.3.6]
D RAN89_05280 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D RAN89_12190 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D RAN89_10595 pcaF; (GenBank) 3-oxoadipyl-CoA thiolase K07823 pcaF; 3-oxoadipyl-CoA thiolase [EC:2.3.1.174]
D RAN89_00795 tautomerase family protein K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D RAN89_04400 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D RAN89_07895 adenylosuccinate lyase family protein K01857 pcaB; 3-carboxy-cis,cis-muconate cycloisomerase [EC:5.5.1.2]
D RAN89_14730 lyase family protein K01857 pcaB; 3-carboxy-cis,cis-muconate cycloisomerase [EC:5.5.1.2]
D RAN89_13495 carboxymuconolactone decarboxylase family protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D RAN89_14745 pcaC; (GenBank) 4-carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D RAN89_04805 ligA; (GenBank) protocatechuate 4,5-dioxygenase subunit alpha K04100 ligA; protocatechuate 4,5-dioxygenase, alpha chain [EC:1.13.11.8]
D RAN89_04810 class III extradiol dioxygenase subunit beta K04101 ligB; protocatechuate 4,5-dioxygenase, beta chain [EC:1.13.11.8]
D RAN89_04815 Gfo/Idh/MocA family oxidoreductase K10219 ligC; 2-hydroxy-4-carboxymuconate semialdehyde hemiacetal dehydrogenase [EC:1.1.1.312]
D RAN89_04800 amidohydrolase family protein K10221 ligI; 2-pyrone-4,6-dicarboxylate lactonase [EC:3.1.1.57]
D RAN89_04785 amidohydrolase family protein K10220 ligJ; 4-oxalmesaconate hydratase [EC:4.2.1.83]
D RAN89_10765 fdx; (GenBank) ISC system 2Fe-2S type ferredoxin K04755 fdx; ferredoxin, 2Fe-2S
D RAN89_01360 pobA; (GenBank) 4-hydroxybenzoate 3-monooxygenase K00481 pobA; p-hydroxybenzoate 3-monooxygenase [EC:1.14.13.2]
D RAN89_11400 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D RAN89_05270 3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase family protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D RAN89_12195 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D RAN89_02255 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D RAN89_05795 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RAN89_11405 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAN89_12915 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAN89_16235 acetyl-CoA C-acyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAN89_18400 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAN89_18475 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation [PATH:rmk00627]
D RAN89_01115 benzaldehyde dehydrogenase K00141 xylC; benzaldehyde dehydrogenase (NAD) [EC:1.2.1.28]
D RAN89_11135 aromatic ring-hydroxylating dioxygenase subunit alpha K03862 vanA; vanillate monooxygenase [EC:1.14.13.82]
D RAN89_11130 PDR/VanB family oxidoreductase K03863 vanB; vanillate monooxygenase ferredoxin subunit
D RAN89_04805 ligA; (GenBank) protocatechuate 4,5-dioxygenase subunit alpha K04100 ligA; protocatechuate 4,5-dioxygenase, alpha chain [EC:1.13.11.8]
D RAN89_04810 class III extradiol dioxygenase subunit beta K04101 ligB; protocatechuate 4,5-dioxygenase, beta chain [EC:1.13.11.8]
D RAN89_04815 Gfo/Idh/MocA family oxidoreductase K10219 ligC; 2-hydroxy-4-carboxymuconate semialdehyde hemiacetal dehydrogenase [EC:1.1.1.312]
D RAN89_04800 amidohydrolase family protein K10221 ligI; 2-pyrone-4,6-dicarboxylate lactonase [EC:3.1.1.57]
D RAN89_05795 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
C 00364 Fluorobenzoate degradation [PATH:rmk00364]
D RAN89_10560 Rieske 2Fe-2S domain-containing protein K05549 benA-xylX; benzoate/toluate 1,2-dioxygenase subunit alpha [EC:1.14.12.10 1.14.12.-]
D RAN89_10555 benB; (GenBank) benzoate 1,2-dioxygenase small subunit K05550 benB-xylY; benzoate/toluate 1,2-dioxygenase subunit beta [EC:1.14.12.10 1.14.12.-]
D RAN89_10550 benC; (GenBank) benzoate 1,2-dioxygenase electron transfer component BenC K05784 benC-xylZ; benzoate/toluate 1,2-dioxygenase reductase component [EC:1.18.1.-]
D RAN89_10545 benD; (GenBank) benzoate diol dehydrogenase BenD K05783 benD-xylL; dihydroxycyclohexadiene carboxylate dehydrogenase [EC:1.3.1.25 1.3.1.-]
D RAN89_10565 catA; (GenBank) catechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1]
D RAN89_01645 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D RAN89_02880 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D RAN89_03495 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D RAN89_06700 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D RAN89_09250 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D RAN89_10570 muconate/chloromuconate family cycloisomerase K01856 catB; muconate cycloisomerase [EC:5.5.1.1]
C 00625 Chloroalkane and chloroalkene degradation [PATH:rmk00625]
D RAN89_15070 zinc-dependent alcohol dehydrogenase family protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D RAN89_04450 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D RAN89_11155 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RAN89_00850 alpha/beta hydrolase K01561 dehH; haloacetate dehalogenase [EC:3.8.1.3]
C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:rmk00361]
D RAN89_10565 catA; (GenBank) catechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1]
D RAN89_01645 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D RAN89_02880 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D RAN89_03495 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D RAN89_06700 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D RAN89_09250 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D RAN89_10570 muconate/chloromuconate family cycloisomerase K01856 catB; muconate cycloisomerase [EC:5.5.1.1]
D RAN89_00850 alpha/beta hydrolase K01561 dehH; haloacetate dehalogenase [EC:3.8.1.3]
C 00623 Toluene degradation [PATH:rmk00623]
D RAN89_01115 benzaldehyde dehydrogenase K00141 xylC; benzaldehyde dehydrogenase (NAD) [EC:1.2.1.28]
D RAN89_10565 catA; (GenBank) catechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1]
D RAN89_10570 muconate/chloromuconate family cycloisomerase K01856 catB; muconate cycloisomerase [EC:5.5.1.1]
D RAN89_01645 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D RAN89_02880 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D RAN89_03495 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D RAN89_06700 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D RAN89_09250 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00622 Xylene degradation [PATH:rmk00622]
D RAN89_01115 benzaldehyde dehydrogenase K00141 xylC; benzaldehyde dehydrogenase (NAD) [EC:1.2.1.28]
D RAN89_10560 Rieske 2Fe-2S domain-containing protein K05549 benA-xylX; benzoate/toluate 1,2-dioxygenase subunit alpha [EC:1.14.12.10 1.14.12.-]
D RAN89_10555 benB; (GenBank) benzoate 1,2-dioxygenase small subunit K05550 benB-xylY; benzoate/toluate 1,2-dioxygenase subunit beta [EC:1.14.12.10 1.14.12.-]
D RAN89_10550 benC; (GenBank) benzoate 1,2-dioxygenase electron transfer component BenC K05784 benC-xylZ; benzoate/toluate 1,2-dioxygenase reductase component [EC:1.18.1.-]
D RAN89_10545 benD; (GenBank) benzoate diol dehydrogenase BenD K05783 benD-xylL; dihydroxycyclohexadiene carboxylate dehydrogenase [EC:1.3.1.25 1.3.1.-]
D RAN89_00795 tautomerase family protein K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D RAN89_04400 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00633 Nitrotoluene degradation [PATH:rmk00633]
D RAN89_16020 alkene reductase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-]
C 00642 Ethylbenzene degradation
D RAN89_05280 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D RAN89_12190 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation [PATH:rmk00643]
D RAN89_12935 maiA; (GenBank) maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2]
D RAN89_13155 fahA; (GenBank) fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
D RAN89_01045 fumarylacetoacetate hydrolase family protein K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2]
C 00791 Atrazine degradation
D RAN89_17250 ureC; (GenBank) urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D RAN89_17245 urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5]
D RAN89_17235 ureA; (GenBank) urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5]
C 00930 Caprolactam degradation [PATH:rmk00930]
D RAN89_05795 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RAN89_11400 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
D RAN89_00795 tautomerase family protein K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D RAN89_04400 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00626 Naphthalene degradation [PATH:rmk00626]
D RAN89_15070 zinc-dependent alcohol dehydrogenase family protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D RAN89_04450 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
D RAN89_04805 ligA; (GenBank) protocatechuate 4,5-dioxygenase subunit alpha K04100 ligA; protocatechuate 4,5-dioxygenase, alpha chain [EC:1.13.11.8]
D RAN89_04810 class III extradiol dioxygenase subunit beta K04101 ligB; protocatechuate 4,5-dioxygenase, beta chain [EC:1.13.11.8]
C 00365 Furfural degradation
C 00984 Steroid degradation [PATH:rmk00984]
D RAN89_08155 hypothetical protein K03333 choD; cholesterol oxidase [EC:1.1.3.6]
D RAN89_08160 GMC oxidoreductase K03333 choD; cholesterol oxidase [EC:1.1.3.6]
D RAN89_05280 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D RAN89_12190 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D RAN89_06515 MaoC family dehydratase K28224 scdD; enoyl-CoA hydratase [EC:4.2.1.-]
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:rmk03020]
D RAN89_00605 rpoB; (GenBank) DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D RAN89_00600 rpoC; (GenBank) DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D RAN89_04685 rpoA; (GenBank) DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D RAN89_17335 rpoZ; (GenBank) DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:rmk03010]
D RAN89_00025 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RAN89_00050 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RAN89_00075 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RAN89_00100 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RAN89_00010 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RAN89_00035 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RAN89_00060 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RAN89_00085 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RAN89_00005 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D RAN89_00030 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D RAN89_00055 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D RAN89_00080 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D RAN89_09385 rpsA; (GenBank) 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D RAN89_09830 rpsB; (GenBank) 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D RAN89_01550 rpsC; (GenBank) 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D RAN89_04680 rpsD; (GenBank) 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D RAN89_04645 rpsE; (GenBank) 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D RAN89_13315 rpsF; (GenBank) 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D RAN89_01600 rpsG; (GenBank) 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D RAN89_04630 rpsH; (GenBank) 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D RAN89_18230 rpsI; (GenBank) 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D RAN89_01585 rpsJ; (GenBank) 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D RAN89_04675 rpsK; (GenBank) 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D RAN89_01605 rpsL; (GenBank) 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D RAN89_04670 rpsM; (GenBank) 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D RAN89_04625 rpsN; (GenBank) 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D RAN89_15740 rpsO; (GenBank) 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D RAN89_09135 rpsP; (GenBank) 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D RAN89_01535 rpsQ; (GenBank) 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D RAN89_13305 rpsR; (GenBank) 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D RAN89_01560 rpsS; (GenBank) 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D RAN89_15005 rpsT; (GenBank) 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D RAN89_15820 rpsU; (GenBank) 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D RAN89_00620 rplA; (GenBank) 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D RAN89_01565 rplB; (GenBank) 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D RAN89_01580 rplC; (GenBank) 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D RAN89_01575 rplD; (GenBank) 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D RAN89_04620 rplE; (GenBank) 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D RAN89_04635 rplF; (GenBank) 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D RAN89_13300 rplI; (GenBank) 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D RAN89_00615 rplJ; (GenBank) 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D RAN89_00625 rplK; (GenBank) 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D RAN89_00610 rplL; (GenBank) 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D RAN89_18235 rplM; (GenBank) 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D RAN89_04610 rplN; (GenBank) 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D RAN89_04655 rplO; (GenBank) 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D RAN89_01545 rplP; (GenBank) 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D RAN89_04690 rplQ; (GenBank) 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D RAN89_04640 rplR; (GenBank) 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D RAN89_09150 rplS; (GenBank) 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D RAN89_12995 rplT; (GenBank) 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D RAN89_07545 rplU; (GenBank) 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D RAN89_01555 rplV; (GenBank) 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D RAN89_01570 rplW; (GenBank) 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D RAN89_04615 rplX; (GenBank) 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D RAN89_17485 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25
D RAN89_07550 rpmA; (GenBank) 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D RAN89_08445 rpmB; (GenBank) 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D RAN89_01540 rpmC; (GenBank) 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D RAN89_04650 rpmD; (GenBank) 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D RAN89_10100 type B 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D RAN89_08825 rpmF; (GenBank) 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D RAN89_08440 rpmG; (GenBank) 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D RAN89_03175 rpmH; (GenBank) 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D RAN89_13000 rpmI; (GenBank) 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D RAN89_04665 rpmJ; (GenBank) 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
C 00970 Aminoacyl-tRNA biosynthesis [PATH:rmk00970]
D RAN89_00015 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RAN89_00040 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RAN89_00065 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RAN89_00090 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RAN89_16645 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RAN89_01375 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RAN89_10325 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RAN89_17350 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RAN89_11670 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D RAN89_16625 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D RAN89_16635 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D RAN89_14240 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D RAN89_17475 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D RAN89_16630 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D RAN89_16640 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D RAN89_00655 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RAN89_05485 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RAN89_14245 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RAN89_14030 tRNA-His K14226 tRNA-His; tRNA His
D RAN89_00020 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D RAN89_00045 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D RAN89_00070 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D RAN89_00095 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D RAN89_08520 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RAN89_09800 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RAN89_14235 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RAN89_14270 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RAN89_15715 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RAN89_12330 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D RAN89_12335 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D RAN89_04695 tRNA-Met K14230 tRNA-Met; tRNA Met
D RAN89_05790 tRNA-Met K14230 tRNA-Met; tRNA Met
D RAN89_17420 tRNA-Ile K14230 tRNA-Met; tRNA Met
D RAN89_00570 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D RAN89_07535 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D RAN89_10320 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D RAN89_12970 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D RAN89_08145 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RAN89_10930 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RAN89_11865 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RAN89_17285 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RAN89_00650 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RAN89_07300 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RAN89_16830 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RAN89_00640 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D RAN89_00660 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D RAN89_09785 tRNA-Val K14237 tRNA-Val; tRNA Val
D RAN89_10775 tRNA-Val K14237 tRNA-Val; tRNA Val
D RAN89_14040 tRNA-Val K14237 tRNA-Val; tRNA Val
D RAN89_16650 gltX; (GenBank) glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RAN89_01740 gatA; (GenBank) Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D RAN89_01745 gatB; (GenBank) Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D RAN89_01735 gatC; (GenBank) Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D RAN89_15970 glutamine--tRNA ligase/YqeY domain fusion protein K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D RAN89_14565 alaS; (GenBank) alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D RAN89_07700 aspS; (GenBank) aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RAN89_18560 glyQ; (GenBank) glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D RAN89_18555 glyS; (GenBank) glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D RAN89_13010 thrS; (GenBank) threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D RAN89_08140 serS; (GenBank) serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D RAN89_10910 cysS; (GenBank) cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D RAN89_07940 metG; (GenBank) methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D RAN89_04045 fmt; (GenBank) methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D RAN89_08540 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D RAN89_04325 leuS; (GenBank) leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RAN89_08340 ileS; (GenBank) isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D RAN89_08985 lysS; (GenBank) lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D RAN89_00920 argS; (GenBank) arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RAN89_07575 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D RAN89_11270 hisS; (GenBank) histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D RAN89_12990 pheS; (GenBank) phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D RAN89_12985 pheT; (GenBank) phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D RAN89_18200 tyrS; (GenBank) tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RAN89_08185 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes [PATH:rmk03008]
D RAN89_08895 rnc; (GenBank) ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D RAN89_09180 orn; (GenBank) oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:rmk03060]
D RAN89_04660 secY; (GenBank) preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D RAN89_00635 secE; (GenBank) preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D RAN89_15720 secG; (GenBank) preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D RAN89_04010 secD; (GenBank) protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D RAN89_04015 secF; (GenBank) protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D RAN89_04005 yajC; (GenBank) preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D RAN89_03190 yidC; (GenBank) membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RAN89_07315 secA; (GenBank) preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RAN89_07775 secB; (GenBank) protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D RAN89_05760 ffh; (GenBank) signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D RAN89_10135 ffs; (GenBank) signal recognition particle sRNA small type K01983 ffs; signal recognition particle 4.5S RNA
D RAN89_17530 ftsY; (GenBank) signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D RAN89_09975 arsA; (GenBank) arsenical pump-driving ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D RAN89_07235 tatA; (GenBank) Sec-independent protein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA
D RAN89_07240 tatB; (GenBank) Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D RAN89_07245 tatC; (GenBank) twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
D RAN89_08885 lepB; (GenBank) signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D RAN89_08335 lspA; (GenBank) signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum [PATH:rmk04141]
D RAN89_05005 htpG; (GenBank) molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D RAN89_15745 Hsp20/alpha crystallin family protein K13993 HSP20; HSP20 family protein
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:rmk04122]
D RAN89_10740 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RAN89_13135 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RAN89_09295 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D RAN89_08535 sulfurtransferase TusA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D RAN89_04240 mnmA; (GenBank) tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D RAN89_13245 molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D RAN89_10180 moaA; (GenBank) GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D RAN89_13255 moaD; (GenBank) molybdopterin converting factor subunit 1 K03636 moaD; sulfur-carrier protein
D RAN89_07750 moeB; (GenBank) molybdopterin-synthase adenylyltransferase MoeB K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D RAN89_08550 moaC; (GenBank) cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D RAN89_15840 mog; (GenBank) molybdopterin adenylyltransferase K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D RAN89_18495 thiS; (GenBank) sulfur carrier protein ThiS K03154 thiS; sulfur carrier protein
C 03050 Proteasome
C 03018 RNA degradation [PATH:rmk03018]
D RAN89_07570 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D RAN89_08785 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12]
D RAN89_15385 eno; (GenBank) phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RAN89_15735 pnp; (GenBank) polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D RAN89_01340 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D RAN89_16355 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D RAN89_16910 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D RAN89_09805 rnr; (GenBank) ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D RAN89_02075 recQ; (GenBank) DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D RAN89_10105 rho; (GenBank) transcription termination factor Rho K03628 rho; transcription termination factor Rho
D RAN89_14800 dnaK; (GenBank) molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D RAN89_00480 groL; (GenBank) chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RAN89_17775 groL; (GenBank) chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RAN89_11290 hfq; (GenBank) RNA chaperone Hfq K03666 hfq; host factor-I protein
D RAN89_10020 ppk1; (GenBank) polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D RAN89_16230 ppk2; (GenBank) polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D RAN89_14960 pcnB; (GenBank) polynucleotide adenylyltransferase PcnB K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:rmk03030]
D RAN89_10770 dnaQ; (GenBank) DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RAN89_11580 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RAN89_12955 exonuclease domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RAN89_14425 dnaE; (GenBank) DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RAN89_10140 dnaX; (GenBank) DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RAN89_12035 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RAN89_04350 holA; (GenBank) DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RAN89_11855 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D RAN89_03165 dnaN; (GenBank) DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RAN89_13295 dnaB; (GenBank) replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D RAN89_14760 dnaG; (GenBank) DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D RAN89_04195 ssb; (GenBank) single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RAN89_05980 ssb; (GenBank) single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RAN89_10175 rnhA; (GenBank) ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D RAN89_09900 rnhB; (GenBank) ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D RAN89_09240 polA; (GenBank) DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RAN89_12280 ligA; (GenBank) NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:rmk03410]
D RAN89_12695 nth; (GenBank) endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D RAN89_00665 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D RAN89_17445 mutY; (GenBank) A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D RAN89_17455 mutM; (GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D RAN89_10915 DNA-3-methyladenine glycosylase K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D RAN89_16605 Ada metal-binding domain-containing protein K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D RAN89_08705 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D RAN89_04150 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D RAN89_01760 exodeoxyribonuclease III K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2]
D RAN89_09595 exodeoxyribonuclease III K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2]
D RAN89_09240 polA; (GenBank) DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RAN89_16210 recJ; (GenBank) single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D RAN89_12280 ligA; (GenBank) NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:rmk03420]
D RAN89_04185 uvrA; (GenBank) excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D RAN89_18345 ATP-binding cassette domain-containing protein K03701 uvrA; excinuclease ABC subunit A
D RAN89_10730 uvrB; (GenBank) excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D RAN89_14055 uvrC; (GenBank) excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D RAN89_09200 3'-5' exonuclease K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RAN89_09240 polA; (GenBank) DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RAN89_12280 ligA; (GenBank) NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:rmk03430]
D RAN89_15870 mutS; (GenBank) DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D RAN89_15480 mutL; (GenBank) DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D RAN89_09200 3'-5' exonuclease K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RAN89_14150 xseA; (GenBank) exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D RAN89_09310 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D RAN89_16210 recJ; (GenBank) single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D RAN89_04195 ssb; (GenBank) single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RAN89_05980 ssb; (GenBank) single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RAN89_14425 dnaE; (GenBank) DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RAN89_03165 dnaN; (GenBank) DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RAN89_10140 dnaX; (GenBank) DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RAN89_04350 holA; (GenBank) DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RAN89_12035 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RAN89_10770 dnaQ; (GenBank) DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RAN89_11580 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RAN89_12955 exonuclease domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RAN89_11855 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D RAN89_12280 ligA; (GenBank) NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D RAN89_13520 Dam family site-specific DNA-(adenine-N6)-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C 03440 Homologous recombination [PATH:rmk03440]
D RAN89_16210 recJ; (GenBank) single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D RAN89_04195 ssb; (GenBank) single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RAN89_05980 ssb; (GenBank) single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RAN89_08905 recO; (GenBank) DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D RAN89_10150 recR; (GenBank) recombination mediator RecR K06187 recR; recombination protein RecR
D RAN89_03745 recA; (GenBank) recombinase RecA K03553 recA; recombination protein RecA
D RAN89_09240 polA; (GenBank) DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RAN89_18155 ruvA; (GenBank) Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D RAN89_18140 ruvB; (GenBank) Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D RAN89_05610 ruvC; (GenBank) crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D RAN89_00960 recG; (GenBank) ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D RAN89_09450 AAA family ATPase K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D RAN89_14425 dnaE; (GenBank) DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RAN89_03165 dnaN; (GenBank) DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RAN89_10140 dnaX; (GenBank) DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RAN89_04350 holA; (GenBank) DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RAN89_12035 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RAN89_10770 dnaQ; (GenBank) DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RAN89_11580 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RAN89_12955 exonuclease domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RAN89_11855 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D RAN89_00540 priA; (GenBank) primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D RAN89_13310 priB; (GenBank) primosomal replication protein N K02686 priB; primosomal replication protein N
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:rmk03250]
D RAN89_10895 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus and Alphavirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03273 Virion - Lassa virus and SFTS virus
C 03272 Virion - Hepatitis viruses
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:rmk02010]
D RAN89_02620 sulfate ABC transporter substrate-binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D RAN89_02435 sulfate ABC transporter substrate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D RAN89_02625 cysT; (GenBank) sulfate ABC transporter permease subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D RAN89_02630 cysW; (GenBank) sulfate ABC transporter permease subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D RAN89_02635 sulfate ABC transporter ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D RAN89_08030 extracellular solute-binding protein K05772 tupA; tungstate transport system substrate-binding protein
D RAN89_08020 ABC transporter permease K05773 tupB; tungstate transport system permease protein
D RAN89_08025 ATP-binding cassette domain-containing protein K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6]
D RAN89_03030 CmpA/NrtA family ABC transporter substrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D RAN89_15765 CmpA/NrtA family ABC transporter substrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D RAN89_03035 ntrB; (GenBank) nitrate ABC transporter permease K15577 nrtB; nitrate/nitrite transport system permease protein
D RAN89_15770 ntrB; (GenBank) nitrate ABC transporter permease K15577 nrtB; nitrate/nitrite transport system permease protein
D RAN89_03040 ABC transporter ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D RAN89_15775 ABC transporter ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D RAN89_04780 substrate-binding domain-containing protein K02020 modA; molybdate transport system substrate-binding protein
D RAN89_14345 modA; (GenBank) molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D RAN89_14340 modB; (GenBank) molybdate ABC transporter permease subunit K02018 modB; molybdate transport system permease protein
D RAN89_14335 modC; (GenBank) molybdenum ABC transporter ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D RAN89_04095 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D RAN89_16795 extracellular solute-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D RAN89_18090 iron ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D RAN89_04090 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D RAN89_16800 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D RAN89_18085 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D RAN89_04085 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D RAN89_04100 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D RAN89_15535 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D RAN89_16805 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D RAN89_18080 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D RAN89_15545 thiamine ABC transporter substrate-binding protein K02064 thiB; thiamine transport system substrate-binding protein
D RAN89_15540 iron ABC transporter permease K02063 thiP; thiamine transport system permease protein
D RAN89_13040 extracellular solute-binding protein K11073 potF; putrescine transport system substrate-binding protein
D RAN89_13025 ABC transporter permease subunit K11074 potI; putrescine transport system permease protein
D RAN89_13030 ABC transporter permease K11075 potH; putrescine transport system permease protein
D RAN89_13035 potA; (GenBank) polyamine ABC transporter ATP-binding protein K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16]
D RAN89_13215 ABC transporter substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D RAN89_13220 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein
D RAN89_13230 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein
D RAN89_13225 ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D RAN89_01325 ATP-binding cassette domain-containing protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D RAN89_02415 ABC transporter ATP-binding protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D RAN89_03670 ugpC; (GenBank) sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D RAN89_18045 ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D RAN89_03655 ABC transporter substrate-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D RAN89_03660 sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D RAN89_03665 carbohydrate ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D RAN89_03120 extracellular solute-binding protein K10188 lacE; lactose/L-arabinose transport system substrate-binding protein
D RAN89_03115 sugar ABC transporter permease K10189 lacF; lactose/L-arabinose transport system permease protein
D RAN89_03110 carbohydrate ABC transporter permease K10190 lacG; lactose/L-arabinose transport system permease protein
D RAN89_03100 ugpC; (GenBank) sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10191 lacK; lactose/L-arabinose transport system ATP-binding protein
D RAN89_02430 sugar ABC transporter substrate-binding protein K10227 smoE; polyol transport system substrate-binding protein
D RAN89_10975 sugar ABC transporter substrate-binding protein K10227 smoE; polyol transport system substrate-binding protein
D RAN89_02425 sugar ABC transporter permease K10228 smoF; polyol transport system permease protein
D RAN89_02420 carbohydrate ABC transporter permease K10229 smoG; polyol transport system permease protein
D RAN89_01320 ABC transporter substrate-binding protein K10232 aglE; alpha-glucoside transport system substrate-binding protein
D RAN89_01315 sugar ABC transporter permease K10233 aglF; alpha-glucoside transport system permease protein
D RAN89_01310 carbohydrate ABC transporter permease K10234 aglG; alpha-glucoside transport system permease protein
D RAN89_02970 chvE; (GenBank) sugar ABC transporter substrate-binding protein K10546 chvE; putative multiple sugar transport system substrate-binding protein
D RAN89_03000 chvE; (GenBank) sugar ABC transporter substrate-binding protein K10546 chvE; putative multiple sugar transport system substrate-binding protein
D RAN89_02980 gguB; (GenBank) sugar ABC transporter permease K10547 gguB; putative multiple sugar transport system permease protein
D RAN89_02975 gguA; (GenBank) sugar ABC transporter ATP-binding protein K10548 gguA; putative multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D RAN89_07130 ABC transporter substrate-binding protein K07323 mlaC; phospholipid transport system substrate-binding protein
D RAN89_01680 MlaD family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D RAN89_07120 mlaD; (GenBank) outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D RAN89_01690 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D RAN89_07115 mlaE; (GenBank) lipid asymmetry maintenance ABC transporter permease subunit MlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D RAN89_07135 STAS domain-containing protein K07122 mlaB; phospholipid transport system transporter-binding protein
D RAN89_01685 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D RAN89_07110 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D RAN89_11765 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D RAN89_16955 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D RAN89_11775 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D RAN89_16965 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D RAN89_11780 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D RAN89_16960 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D RAN89_11770 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D RAN89_16970 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D RAN89_03650 ABC transporter substrate-binding protein K17315 gtsA; glucose/mannose transport system substrate-binding protein
D RAN89_18060 ABC transporter substrate-binding protein K17315 gtsA; glucose/mannose transport system substrate-binding protein
D RAN89_18065 ABC transporter substrate-binding protein K17315 gtsA; glucose/mannose transport system substrate-binding protein
D RAN89_18055 sugar ABC transporter permease K17316 gtsB; glucose/mannose transport system permease protein
D RAN89_18050 carbohydrate ABC transporter permease K17317 gtsC; glucose/mannose transport system permease protein
D RAN89_11615 ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D RAN89_11610 ABC transporter permease K10440 rbsC; ribose transport system permease protein
D RAN89_11605 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D RAN89_02155 ABC transporter substrate-binding protein K23508 ytfQ; galactofuranose transport system substrate-binding protein
D RAN89_02140 yjfF; (GenBank) galactofuranose ABC transporter, permease protein YjfF K23509 ytfT; galactofuranose transport system permease protein
D RAN89_02145 ABC transporter permease K23509 ytfT; galactofuranose transport system permease protein
D RAN89_02150 sugar ABC transporter ATP-binding protein K10820 ytfR; galactofuranose transport system ATP-binding protein [EC:7.5.2.9]
D RAN89_12730 substrate-binding domain-containing protein K10543 xylF; D-xylose transport system substrate-binding protein
D RAN89_12725 ABC transporter permease K10544 xylH; D-xylose transport system permease protein
D RAN89_12720 ATP-binding cassette domain-containing protein K10545 xylG; D-xylose transport system ATP-binding protein [EC:7.5.2.10]
D RAN89_01805 substrate-binding domain-containing protein K10552 frcB; fructose transport system substrate-binding protein
D RAN89_01800 ABC transporter permease K10553 frcC; fructose transport system permease protein
D RAN89_01795 ATP-binding cassette domain-containing protein K10554 frcA; fructose transport system ATP-binding protein
D RAN89_03960 rhaS; (GenBank) rhamnose ABC transporter substrate-binding protein K10559 rhaS; rhamnose transport system substrate-binding protein
D RAN89_03970 ABC transporter permease K10560 rhaP; rhamnose transport system permease protein
D RAN89_03975 ABC transporter permease K10561 rhaQ; rhamnose transport system permease protein
D RAN89_03965 sugar ABC transporter ATP-binding protein K10562 rhaT; rhamnose transport system ATP-binding protein [EC:7.5.2.-]
D RAN89_07655 ugpB; (GenBank) sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D RAN89_07650 ugpA; (GenBank) sn-glycerol-3-phosphate ABC transporter permease UgpA K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D RAN89_07645 ugpE; (GenBank) sn-glycerol-3-phosphate ABC transporter permease UgpE K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D RAN89_07640 ugpC; (GenBank) sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D RAN89_10060 pstS; (GenBank) phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D RAN89_10065 pstC; (GenBank) phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D RAN89_10070 pstA; (GenBank) phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D RAN89_10075 pstB; (GenBank) phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D RAN89_16575 phnD; (GenBank) phosphonate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D RAN89_16570 phnC; (GenBank) phosphonate ABC transporter ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D RAN89_04525 transporter substrate-binding domain-containing protein K10013 argT; lysine/arginine/ornithine transport system substrate-binding protein
D RAN89_16300 amino acid ABC transporter substrate-binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein
D RAN89_16305 ABC transporter permease subunit K09970 aapQ; general L-amino acid transport system permease protein
D RAN89_16310 amino acid ABC transporter permease K09971 aapM; general L-amino acid transport system permease protein
D RAN89_16315 amino acid ABC transporter ATP-binding protein K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1]
D RAN89_11485 ABC transporter substrate-binding protein K10022 aotJ; arginine/ornithine transport system substrate-binding protein
D RAN89_11475 ABC transporter permease subunit K10023 aotM; arginine/ornithine transport system permease protein
D RAN89_11480 ABC transporter permease K10024 aotQ; arginine/ornithine transport system permease protein
D RAN89_11465 ATP-binding cassette domain-containing protein K10025 aotP; arginine/ornithine transport system ATP-binding protein [EC:7.4.2.1]
D RAN89_04530 ABC transporter permease subunit K23056 K23056; putative lysine/arginine/ornithine/histidine/octopine transport system permease protein
D RAN89_04535 ABC transporter permease subunit K23057 K23057; putative lysine/arginine/ornithine/histidine/octopine transport system permease protein
D RAN89_04725 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RAN89_04795 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RAN89_04900 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RAN89_05070 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RAN89_05330 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RAN89_10540 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RAN89_14695 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RAN89_15935 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RAN89_15945 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RAN89_16190 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RAN89_04730 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D RAN89_04895 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D RAN89_05060 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D RAN89_05355 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D RAN89_08480 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D RAN89_10535 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D RAN89_14700 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D RAN89_04735 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D RAN89_04890 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D RAN89_05065 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D RAN89_05350 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D RAN89_08485 ABC transporter ATP-binding protein K01998 livM; branched-chain amino acid transport system permease protein
D RAN89_10530 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D RAN89_14705 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D RAN89_04740 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RAN89_04885 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RAN89_05055 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RAN89_05345 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RAN89_08490 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RAN89_10525 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RAN89_14710 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RAN89_04745 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RAN89_04880 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RAN89_05075 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RAN89_05340 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RAN89_08495 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RAN89_10520 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RAN89_14715 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RAN89_17165 urtA; (GenBank) urea ABC transporter substrate-binding protein K11959 urtA; urea transport system substrate-binding protein
D RAN89_17160 urtB; (GenBank) urea ABC transporter permease subunit UrtB K11960 urtB; urea transport system permease protein
D RAN89_17155 urtC; (GenBank) urea ABC transporter permease subunit UrtC K11961 urtC; urea transport system permease protein
D RAN89_17150 urtD; (GenBank) urea ABC transporter ATP-binding protein UrtD K11962 urtD; urea transport system ATP-binding protein
D RAN89_17145 urtE; (GenBank) urea ABC transporter ATP-binding subunit UrtE K11963 urtE; urea transport system ATP-binding protein
D RAN89_13105 ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein
D RAN89_13085 ABC transporter permease subunit K12369 dppB; dipeptide transport system permease protein
D RAN89_13090 ABC transporter permease subunit K12370 dppC; dipeptide transport system permease protein
D RAN89_13095 ABC transporter ATP-binding protein K12371 dppD; dipeptide transport system ATP-binding protein
D RAN89_13100 peptide ABC transporter ATP-binding protein K12372 dppF; dipeptide transport system ATP-binding protein
D RAN89_11890 extracellular solute-binding protein K13893 yejA; microcin C transport system substrate-binding protein
D RAN89_11895 ABC transporter permease subunit K13894 yejB; microcin C transport system permease protein
D RAN89_11900 ABC transporter permease K13895 yejE; microcin C transport system permease protein
D RAN89_11905 dipeptide ABC transporter ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein
D RAN89_06850 biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component
D RAN89_18390 biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component
D RAN89_18385 energy-coupling factor transporter transmembrane protein EcfT K16783 bioN; biotin transport system permease protein
D RAN89_18380 ABC transporter ATP-binding protein K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-]
D RAN89_04490 ABC transporter permease K09694 nodJ; lipooligosaccharide transport system permease protein
D RAN89_04495 ATP-binding cassette domain-containing protein K09695 nodI; lipooligosaccharide transport system ATP-binding protein
D RAN89_16200 lipoprotein-releasing ABC transporter permease subunit K09808 lolC_E_F; lipoprotein-releasing system permease protein
D RAN89_16195 lolD; (GenBank) lipoprotein-releasing ABC transporter ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D RAN89_17200 ATP-binding cassette domain-containing protein K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D RAN89_11845 lptF; (GenBank) LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein
D RAN89_11840 lptG; (GenBank) LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein
D RAN89_00895 lptB; (GenBank) LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D RAN89_12370 msbA; (GenBank) lipid A export permease/ATP-binding protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D RAN89_05365 ABC transporter ATP-binding protein/permease K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
D RAN89_04230 type I secretion system permease/ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D RAN89_00255 type I secretion system permease/ATPase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D RAN89_17925 ABC transporter ATP-binding protein/permease K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein
C 02060 Phosphotransferase system (PTS) [PATH:rmk02060]
D RAN89_01490 ptsP; (GenBank) phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D RAN89_01495 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D RAN89_01500 PTS fructose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D RAN89_04290 PTS sugar transporter subunit IIA K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
C 03070 Bacterial secretion system [PATH:rmk03070]
D RAN89_16510 TolC family outer membrane protein K12340 tolC; outer membrane protein
D RAN89_17885 gspD; (GenBank) type II secretion system secretin GspD K02453 gspD; general secretion pathway protein D
D RAN89_17845 type II secretion system protein N K02452 gspC; general secretion pathway protein C
D RAN89_17905 gspF; (GenBank) type II secretion system inner membrane protein GspF K02455 gspF; general secretion pathway protein F
D RAN89_17850 gspG; (GenBank) type II secretion system major pseudopilin GspG K02456 gspG; general secretion pathway protein G
D RAN89_17855 prepilin-type N-terminal cleavage/methylation domain-containing protein K02457 gspH; general secretion pathway protein H
D RAN89_17860 gspI; (GenBank) type II secretion system minor pseudopilin GspI K02458 gspI; general secretion pathway protein I
D RAN89_17865 gspK; (GenBank) type II secretion system minor pseudopilin GspK K02460 gspK; general secretion pathway protein K
D RAN89_17870 gspL; (GenBank) type II secretion system protein GspL K02461 gspL; general secretion pathway protein L
D RAN89_17875 gspM; (GenBank) type II secretion system protein GspM K02462 gspM; general secretion pathway protein M
D RAN89_16175 ATPase, T2SS/T4P/T4SS family K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D RAN89_17890 ATPase, T2SS/T4P/T4SS family K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D RAN89_04010 secD; (GenBank) protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D RAN89_04015 secF; (GenBank) protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D RAN89_00635 secE; (GenBank) preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D RAN89_15720 secG; (GenBank) preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D RAN89_04660 secY; (GenBank) preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D RAN89_04005 yajC; (GenBank) preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D RAN89_03190 yidC; (GenBank) membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RAN89_07315 secA; (GenBank) preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RAN89_17530 ftsY; (GenBank) signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D RAN89_07775 secB; (GenBank) protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D RAN89_05760 ffh; (GenBank) signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D RAN89_07235 tatA; (GenBank) Sec-independent protein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA
D RAN89_07240 tatB; (GenBank) Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D RAN89_07245 tatC; (GenBank) twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:rmk02020]
D RAN89_10090 phoR; (GenBank) phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D RAN89_10085 phoB; (GenBank) phosphate regulon transcriptional regulator PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D RAN89_12670 alkaline phosphatase D family protein K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D RAN89_10060 pstS; (GenBank) phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D RAN89_12645 ATP-binding protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D RAN89_12640 ompR; (GenBank) two-component system response regulator OmpR K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D RAN89_08360 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107]
D RAN89_08875 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107]
D RAN89_18480 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107]
D RAN89_02385 efflux RND transporter periplasmic adaptor subunit K07799 mdtA; membrane fusion protein, multidrug efflux system
D RAN89_02380 efflux RND transporter permease subunit K07788 mdtB; multidrug efflux pump
D RAN89_01840 ATP-binding protein K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D RAN89_04105 HAMP domain-containing sensor histidine kinase K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D RAN89_01845 response regulator transcription factor K07666 qseB; two-component system, OmpR family, response regulator QseB
D RAN89_00285 flhD; (GenBank) flagellar transcriptional regulator FlhD K02403 flhD; flagellar transcriptional activator FlhD
D RAN89_00290 flhC; (GenBank) flagellar transcriptional regulator FlhC K02402 flhC; flagellar transcriptional activator FlhC
D RAN89_00275 flagellin K02406 fliC; flagellin
D RAN89_00280 flagellin K02406 fliC; flagellin
D RAN89_00335 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
D RAN89_03015 FliA/WhiG family RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA
D RAN89_00295 motA; (GenBank) flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D RAN89_11550 DUF4118 domain-containing protein K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D RAN89_11555 response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D RAN89_05245 ATP-binding protein K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D RAN89_11420 sensor histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D RAN89_14370 sensor histidine kinase N-terminal domain-containing protein K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D RAN89_04110 response regulator K07774 tctD; two-component system, OmpR family, response regulator TctD
D RAN89_11425 response regulator K07774 tctD; two-component system, OmpR family, response regulator TctD
D RAN89_14365 response regulator transcription factor K07774 tctD; two-component system, OmpR family, response regulator TctD
D RAN89_02685 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D RAN89_07885 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D RAN89_10500 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D RAN89_14350 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D RAN89_16165 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D RAN89_02680 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein
D RAN89_07890 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein
D RAN89_10505 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein
D RAN89_14355 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein
D RAN89_16170 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein
D RAN89_05400 tripartite tricarboxylate transporter substrate-binding protein K07795 tctC; putative tricarboxylic transport membrane protein
D RAN89_11415 tripartite tricarboxylate transporter substrate-binding protein K07795 tctC; putative tricarboxylic transport membrane protein
D RAN89_14360 tripartite tricarboxylate transporter substrate-binding protein K07795 tctC; putative tricarboxylic transport membrane protein
D RAN89_06585 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D RAN89_03170 dnaA; (GenBank) chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D RAN89_07900 CoA ester lyase K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D RAN89_09100 aldolase/citrate lyase family protein K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D RAN89_08740 histidine kinase K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3]
D RAN89_08745 LytTR family DNA-binding domain-containing protein K08083 algR; two-component system, LytTR family, response regulator AlgR
D RAN89_17755 response regulator transcription factor K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D RAN89_12265 [protein-PII] uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D RAN89_10245 P-II family nitrogen regulator K04751 glnB; nitrogen regulatory protein P-II 1
D RAN89_09585 glnL; (GenBank) nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D RAN89_09590 ntrC; (GenBank) nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D RAN89_06800 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RAN89_09575 glnA; (GenBank) type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RAN89_13020 type III glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RAN89_13050 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RAN89_00580 ATP-binding protein K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D RAN89_00575 response regulator K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D RAN89_11405 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAN89_12915 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAN89_16235 acetyl-CoA C-acyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAN89_18400 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAN89_18475 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAN89_06915 dicarboxylate/amino acid:cation symporter K11103 dctA; aerobic C4-dicarboxylate transport protein
D RAN89_05745 ATP-binding protein K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D RAN89_05740 sigma-54 dependent transcriptional regulator K02667 pilR; two-component system, NtrC family, response regulator PilR
D RAN89_00890 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D RAN89_03805 pilin K02650 pilA; type IV pilus assembly protein PilA
D RAN89_00115 CheR family methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D RAN89_17715 CheR family methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D RAN89_00415 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RAN89_00715 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RAN89_00995 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RAN89_01000 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RAN89_01070 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RAN89_01165 Cache 3/Cache 2 fusion domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D RAN89_01180 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RAN89_01220 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RAN89_02810 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RAN89_02950 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RAN89_05415 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RAN89_06875 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RAN89_07610 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RAN89_07855 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RAN89_07995 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RAN89_09245 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RAN89_09710 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RAN89_10230 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RAN89_10700 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RAN89_13515 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RAN89_13595 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RAN89_13660 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RAN89_13665 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RAN89_14475 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RAN89_14950 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RAN89_15160 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RAN89_16250 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RAN89_17725 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RAN89_17745 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RAN89_17940 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RAN89_08595 methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor
D RAN89_00120 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D RAN89_10225 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D RAN89_17720 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D RAN89_00125 chemotaxis protein CheW K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RAN89_17730 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RAN89_00130 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RAN89_00305 cheY; (GenBank) chemotaxis response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RAN89_06745 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RAN89_07870 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RAN89_17740 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RAN89_00105 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RAN89_17705 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RAN89_03940 chemotaxis protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D RAN89_11590 chemotaxis protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D RAN89_05905 methyl-accepting chemotaxis protein K02660 pilJ; twitching motility protein PilJ
D RAN89_05900 chemotaxis protein CheW K02659 pilI; twitching motility protein PilI
D RAN89_05910 Hpt domain-containing protein K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D RAN89_05890 response regulator K02657 pilG; twitching motility two-component system response regulator PilG
D RAN89_05895 response regulator K02658 pilH; twitching motility two-component system response regulator PilH
D RAN89_02670 PAS domain S-box protein K11711 dctS; two-component system, LuxR family, sensor histidine kinase DctS [EC:2.7.13.3]
D RAN89_02665 response regulator K11712 dctR; two-component system, LuxR family, response regulator DctR
D RAN89_02675 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D RAN89_06945 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D RAN89_08585 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D RAN89_09325 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D RAN89_11115 sialic acid TRAP transporter substrate-binding protein SiaP K11688 dctP; TRAP-type transport system periplasmic protein
D RAN89_14580 sialic acid TRAP transporter substrate-binding protein SiaP K11688 dctP; TRAP-type transport system periplasmic protein
D RAN89_15555 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D RAN89_17025 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D RAN89_17060 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D RAN89_06935 TRAP transporter small permease K11689 dctQ; TRAP-type transport system small permease protein
D RAN89_09340 TRAP transporter small permease subunit K11689 dctQ; TRAP-type transport system small permease protein
D RAN89_11110 TRAP transporter small permease K11689 dctQ; TRAP-type transport system small permease protein
D RAN89_14585 TRAP transporter small permease subunit K11689 dctQ; TRAP-type transport system small permease protein
D RAN89_15565 TRAP transporter small permease subunit K11689 dctQ; TRAP-type transport system small permease protein
D RAN89_17030 TRAP transporter small permease K11689 dctQ; TRAP-type transport system small permease protein
D RAN89_06940 TRAP transporter large permease subunit K11690 dctM; TRAP-type transport system large permease protein
D RAN89_09335 TRAP transporter large permease subunit K11690 dctM; TRAP-type transport system large permease protein
D RAN89_11105 TRAP transporter large permease K11690 dctM; TRAP-type transport system large permease protein
D RAN89_14590 TRAP transporter large permease K11690 dctM; TRAP-type transport system large permease protein
D RAN89_15560 TRAP transporter large permease subunit K11690 dctM; TRAP-type transport system large permease protein
D RAN89_17035 TRAP transporter large permease K11690 dctM; TRAP-type transport system large permease protein
D RAN89_06865 PAS domain-containing sensor histidine kinase K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3]
D RAN89_10410 response regulator K13815 rpfG; two-component system, response regulator RpfG
D RAN89_03430 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RAN89_05045 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RAN89_08455 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RAN89_14205 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RAN89_15955 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D RAN89_11025 ATP-binding protein K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D RAN89_11020 response regulator transcription factor K15012 regA; two-component system, response regulator RegA
D RAN89_07275 petA; (GenBank) ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D RAN89_07280 cytochrome bc complex cytochrome b subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D RAN89_07285 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D RAN89_04545 c-type cytochrome K08738 CYC; cytochrome c
D RAN89_08690 c-type cytochrome K08738 CYC; cytochrome c
D RAN89_10355 c-type cytochrome K08738 CYC; cytochrome c
D RAN89_10430 ccoN; (GenBank) cytochrome-c oxidase, cbb3-type subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D RAN89_10435 ccoO; (GenBank) cytochrome-c oxidase, cbb3-type subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D RAN89_10440 CcoQ/FixQ family Cbb3-type cytochrome c oxidase assembly chaperone K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D RAN89_10445 ccoP; (GenBank) cytochrome-c oxidase, cbb3-type subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D RAN89_16510 TolC family outer membrane protein K12340 tolC; outer membrane protein
D RAN89_07490 epsE; (GenBank) polysaccharide export protein EpsE K01991 wza; polysaccharide biosynthesis/export protein
D RAN89_01335 low molecular weight protein-tyrosine-phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D RAN89_01200 hybrid sensor histidine kinase/response regulator K20975 K20975; two-component system, sensor histidine kinase [EC:2.7.13.3]
D RAN89_10195 ATP-binding protein K20975 K20975; two-component system, sensor histidine kinase [EC:2.7.13.3]
D RAN89_00345 flgM; (GenBank) flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D RAN89_12190 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04082 Neuroactive ligand signaling
C 04081 Hormone signaling
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome [PATH:rmk04146]
D RAN89_01150 phytanoyl-CoA dioxygenase family protein K00477 PHYH; phytanoyl-CoA hydroxylase [EC:1.14.11.18]
D RAN89_04265 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D RAN89_05050 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D RAN89_05335 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D RAN89_06610 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D RAN89_08230 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D RAN89_10380 malonyl-CoA decarboxylase family protein K01578 MLYCD; malonyl-CoA decarboxylase [EC:4.1.1.9]
D RAN89_14130 icd; (GenBank) NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D RAN89_14140 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D RAN89_18375 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D RAN89_14145 Fe-Mn family superoxide dismutase K04564 SOD2; superoxide dismutase, Fe-Mn family [EC:1.15.1.1]
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis [PATH:rmk04148]
D RAN89_01160 rocF; (GenBank) arginase K01476 rocF; arginase [EC:3.5.3.1]
D RAN89_04345 arginase K01476 rocF; arginase [EC:3.5.3.1]
D RAN89_07275 petA; (GenBank) ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:rmk02024]
D RAN89_11290 hfq; (GenBank) RNA chaperone Hfq K03666 hfq; host factor-I protein
D RAN89_00700 chorismate-binding protein K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D RAN89_00690 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D RAN89_03050 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D RAN89_05675 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D RAN89_01840 ATP-binding protein K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D RAN89_04105 HAMP domain-containing sensor histidine kinase K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D RAN89_01845 response regulator transcription factor K07666 qseB; two-component system, OmpR family, response regulator QseB
D RAN89_00285 flhD; (GenBank) flagellar transcriptional regulator FlhD K02403 flhD; flagellar transcriptional activator FlhD
D RAN89_00290 flhC; (GenBank) flagellar transcriptional regulator FlhC K02402 flhC; flagellar transcriptional activator FlhC
D RAN89_11555 response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D RAN89_02850 extracellular solute-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D RAN89_14615 ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D RAN89_02860 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D RAN89_14625 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D RAN89_02855 ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D RAN89_14620 ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D RAN89_02845 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D RAN89_14610 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D RAN89_04725 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RAN89_04795 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RAN89_04900 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RAN89_05070 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RAN89_05330 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RAN89_10540 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RAN89_14695 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RAN89_15935 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RAN89_15945 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RAN89_16190 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RAN89_04730 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D RAN89_04895 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D RAN89_05060 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D RAN89_05355 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D RAN89_08480 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D RAN89_10535 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D RAN89_14700 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D RAN89_04735 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D RAN89_04890 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D RAN89_05065 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D RAN89_05350 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D RAN89_08485 ABC transporter ATP-binding protein K01998 livM; branched-chain amino acid transport system permease protein
D RAN89_10530 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D RAN89_14705 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D RAN89_04740 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RAN89_04885 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RAN89_05055 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RAN89_05345 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RAN89_08490 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RAN89_10525 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RAN89_14710 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RAN89_04745 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RAN89_04880 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RAN89_05075 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RAN89_05340 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RAN89_08495 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RAN89_10520 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RAN89_14715 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RAN89_04265 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D RAN89_05050 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D RAN89_05335 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D RAN89_06610 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D RAN89_08230 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D RAN89_10410 response regulator K13815 rpfG; two-component system, response regulator RpfG
D RAN89_03430 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RAN89_05045 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RAN89_08455 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RAN89_14205 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RAN89_10820 ribD; (GenBank) bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D RAN89_14645 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D RAN89_15295 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D RAN89_03190 yidC; (GenBank) membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RAN89_08930 S8 family serine peptidase K14645 K14645; serine protease [EC:3.4.21.-]
D RAN89_00635 secE; (GenBank) preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D RAN89_15720 secG; (GenBank) preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D RAN89_04660 secY; (GenBank) preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D RAN89_04005 yajC; (GenBank) preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D RAN89_07315 secA; (GenBank) preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RAN89_17530 ftsY; (GenBank) signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D RAN89_07775 secB; (GenBank) protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D RAN89_05760 ffh; (GenBank) signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:rmk02030]
D RAN89_00415 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RAN89_00715 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RAN89_00995 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RAN89_01000 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RAN89_01070 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RAN89_01165 Cache 3/Cache 2 fusion domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D RAN89_01180 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RAN89_01220 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RAN89_02810 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RAN89_02950 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RAN89_05415 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RAN89_06875 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RAN89_07610 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RAN89_07855 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RAN89_07995 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RAN89_09245 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RAN89_09710 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RAN89_10230 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RAN89_10700 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RAN89_13515 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RAN89_13595 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RAN89_13660 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RAN89_13665 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RAN89_14475 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RAN89_14950 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RAN89_15160 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RAN89_16250 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RAN89_17725 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RAN89_17745 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RAN89_17940 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RAN89_08595 methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor
D RAN89_11615 ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D RAN89_13105 ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein
D RAN89_00125 chemotaxis protein CheW K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RAN89_17730 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RAN89_00120 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D RAN89_10225 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D RAN89_17720 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D RAN89_00130 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RAN89_00305 cheY; (GenBank) chemotaxis response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RAN89_06745 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RAN89_07870 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RAN89_17740 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RAN89_00310 protein phosphatase CheZ K03414 cheZ; chemotaxis protein CheZ
D RAN89_12055 protein phosphatase CheZ K03414 cheZ; chemotaxis protein CheZ
D RAN89_00105 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RAN89_17705 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RAN89_03940 chemotaxis protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D RAN89_11590 chemotaxis protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D RAN89_17710 chemotaxis protein CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D RAN89_00115 CheR family methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D RAN89_17715 CheR family methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D RAN89_00205 fliG; (GenBank) flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D RAN89_00175 fliM; (GenBank) flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D RAN89_00170 fliN; (GenBank) flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D RAN89_00295 motA; (GenBank) flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D RAN89_00300 motB; (GenBank) flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:rmk02040]
D RAN89_00215 fliE; (GenBank) flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D RAN89_00210 fliF; (GenBank) flagellar basal-body MS-ring/collar protein FliF K02409 fliF; flagellar M-ring protein FliF
D RAN89_00205 fliG; (GenBank) flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D RAN89_00200 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D RAN89_00195 fliI; (GenBank) flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D RAN89_00190 fliJ; (GenBank) flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ
D RAN89_00185 flagellar hook-length control protein FliK K02414 fliK; flagellar hook-length control protein FliK
D RAN89_00180 flagellar basal body-associated FliL family protein K02415 fliL; flagellar protein FliL
D RAN89_00175 fliM; (GenBank) flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D RAN89_00170 fliN; (GenBank) flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D RAN89_00165 flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D RAN89_00160 fliP; (GenBank) flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D RAN89_00155 fliQ; (GenBank) flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D RAN89_00150 fliR; (GenBank) flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D RAN89_00315 EscU/YscU/HrcU family type III secretion system export apparatus switch protein K02401 flhB; flagellar biosynthesis protein FlhB
D RAN89_00350 flgA; (GenBank) flagellar basal body P-ring formation chaperone FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D RAN89_00355 flgB; (GenBank) flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D RAN89_00360 flgC; (GenBank) flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D RAN89_00365 flagellar hook capping FlgD N-terminal domain-containing protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D RAN89_00370 flgE; (GenBank) flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D RAN89_00375 flagellar basal body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D RAN89_00380 flgG; (GenBank) flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D RAN89_00385 flagellar basal body L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D RAN89_00390 flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D RAN89_00395 flgJ; (GenBank) flagellar assembly peptidoglycan hydrolase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ
D RAN89_00400 flgK; (GenBank) flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D RAN89_00405 flgL; (GenBank) flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D RAN89_00275 flagellin K02406 fliC; flagellin
D RAN89_00280 flagellin K02406 fliC; flagellin
D RAN89_00270 fliD; (GenBank) flagellar filament capping protein FliD K02407 fliD; flagellar hook-associated protein 2
D RAN89_00265 fliS; (GenBank) flagellar export chaperone FliS K02422 fliS; flagellar secretion chaperone FliS
D RAN89_00260 flagellar protein FliT K02423 fliT; flagellar protein FliT
D RAN89_00295 motA; (GenBank) flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D RAN89_00300 motB; (GenBank) flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D RAN89_00345 flgM; (GenBank) flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D RAN89_14770 rpoD; (GenBank) RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D RAN89_00285 flhD; (GenBank) flagellar transcriptional regulator FlhD K02403 flhD; flagellar transcriptional activator FlhD
D RAN89_00290 flhC; (GenBank) flagellar transcriptional regulator FlhC K02402 flhC; flagellar transcriptional activator FlhC
D RAN89_00890 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D RAN89_00335 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
D RAN89_03015 FliA/WhiG family RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D RAN89_15385 eno; (GenBank) phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04981 Folate transport and metabolism [PATH:rmk04981]
D RAN89_18000 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
D RAN89_09605 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D RAN89_10865 glyA; (GenBank) serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RAN89_09610 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D RAN89_04540 mmuM; (GenBank) homocysteine S-methyltransferase K00547 mmuM; homocysteine S-methyltransferase [EC:2.1.1.10]
D RAN89_02055 metH; (GenBank) methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D RAN89_02070 homocysteine S-methyltransferase family protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04980 Cobalamin transport and metabolism [PATH:rmk04980]
D RAN89_02715 cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D RAN89_10680 meaB; (GenBank) methylmalonyl Co-A mutase-associated GTPase MeaB K07588 MMAA; GTPase [EC:3.6.5.-]
D RAN89_10675 scpA; (GenBank) methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D RAN89_02055 metH; (GenBank) methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D RAN89_02070 homocysteine S-methyltransferase family protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
C 04382 Cornified envelope formation
D RAN89_15120 hutH; (GenBank) histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:rmk01501]
D RAN89_01770 AmpG family muropeptide MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D RAN89_08920 nagZ; (GenBank) beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D RAN89_09275 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D RAN89_15285 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D RAN89_16490 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D RAN89_09280 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D RAN89_15290 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D RAN89_16495 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D RAN89_14645 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D RAN89_15295 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D RAN89_16510 TolC family outer membrane protein K12340 tolC; outer membrane protein
D RAN89_03405 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D RAN89_07030 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D RAN89_01715 mrdA; (GenBank) penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D RAN89_05535 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:rmk01502]
D RAN89_05575 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RAN89_01885 alr; (GenBank) alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D RAN89_05545 murF; (GenBank) UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D RAN89_05550 mraY; (GenBank) phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D RAN89_05565 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:rmk01503]
D RAN89_08360 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107]
D RAN89_08875 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107]
D RAN89_18480 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107]
D RAN89_00910 thiol:disulfide interchange protein DsbA/DsbL K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D RAN89_10895 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D RAN89_09275 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D RAN89_15285 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D RAN89_16490 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D RAN89_09280 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D RAN89_15290 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D RAN89_16495 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D RAN89_16510 TolC family outer membrane protein K12340 tolC; outer membrane protein
D RAN89_09890 lpxA; (GenBank) acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:rmk01000]
C 01001 Protein kinases [BR:rmk01001]
D RAN89_13830 HipA domain-containing protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D RAN89_07480 epsG; (GenBank) chain length determinant protein tyrosine kinase EpsG K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D RAN89_10090 phoR; (GenBank) phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D RAN89_12645 ATP-binding protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D RAN89_01840 ATP-binding protein K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D RAN89_04105 HAMP domain-containing sensor histidine kinase K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D RAN89_11550 DUF4118 domain-containing protein K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D RAN89_05245 ATP-binding protein K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D RAN89_11420 sensor histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D RAN89_14370 sensor histidine kinase N-terminal domain-containing protein K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D RAN89_16880 HAMP domain-containing sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D RAN89_08740 histidine kinase K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3]
D RAN89_09585 glnL; (GenBank) nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D RAN89_00580 ATP-binding protein K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D RAN89_05745 ATP-binding protein K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D RAN89_00125 chemotaxis protein CheW K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RAN89_17730 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RAN89_05910 Hpt domain-containing protein K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D RAN89_02670 PAS domain S-box protein K11711 dctS; two-component system, LuxR family, sensor histidine kinase DctS [EC:2.7.13.3]
D RAN89_06865 PAS domain-containing sensor histidine kinase K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3]
D RAN89_11025 ATP-binding protein K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D RAN89_01200 hybrid sensor histidine kinase/response regulator K20975 K20975; two-component system, sensor histidine kinase [EC:2.7.13.3]
D RAN89_10195 ATP-binding protein K20975 K20975; two-component system, sensor histidine kinase [EC:2.7.13.3]
D RAN89_02325 response regulator K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:rmk01009]
D RAN89_18260 ahcY; (GenBank) adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D RAN89_05005 htpG; (GenBank) molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D RAN89_03780 Stp1/IreP family PP2C-type Ser/Thr phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D RAN89_11210 protein phosphatase 2C domain-containing protein K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D RAN89_17315 serine/threonine-protein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D RAN89_12665 serB; (GenBank) phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:rmk01002]
D RAN89_08335 lspA; (GenBank) signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D RAN89_07350 A24 family peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D RAN89_11990 guaA; (GenBank) glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D RAN89_16660 purF; (GenBank) amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D RAN89_07100 glutamate synthase-related protein K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D RAN89_03680 SIS domain-containing protein K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D RAN89_17960 glmS; (GenBank) glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D RAN89_05165 asnB; (GenBank) asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D RAN89_16820 pepN; (GenBank) aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D RAN89_10940 M3 family metallopeptidase K01414 prlC; oligopeptidase A [EC:3.4.24.70]
D RAN89_17520 pitrilysin family protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D RAN89_17525 pitrilysin family protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D RAN89_11850 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D RAN89_12315 dapE; (GenBank) succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D RAN89_10605 M20 aminoacylase family protein K01451 hipO; hippurate hydrolase [EC:3.5.1.32]
D RAN89_12260 map; (GenBank) type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D RAN89_03390 aminopeptidase P N-terminal domain-containing protein K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D RAN89_09945 ftsH; (GenBank) ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D RAN89_09175 M48 family metallopeptidase K06013 STE24; STE24 endopeptidase [EC:3.4.24.84]
D RAN89_05405 htpX; (GenBank) protease HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D RAN89_03820 M48 family metalloprotease K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-]
D RAN89_09865 rseP; (GenBank) RIP metalloprotease RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D RAN89_12550 HlyD family efflux transporter periplasmic adaptor subunit K16922 yydH; putative peptide zinc metalloprotease protein
D RAN89_02735 ImpA family metalloprotease K21429 impA; immunomodulating metalloprotease
D RAN89_16070 zinc-dependent peptidase K09933 mtfA; MtfA peptidase
D RAN89_08360 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107]
D RAN89_08875 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107]
D RAN89_18480 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107]
D RAN89_07250 trypsin-like peptidase domain-containing protein K04772 degQ; serine protease DegQ [EC:3.4.21.-]
D RAN89_08930 S8 family serine peptidase K14645 K14645; serine protease [EC:3.4.21.-]
D RAN89_01610 D-alanyl-D-alanine carboxypeptidase family protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D RAN89_10300 serine hydrolase K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-]
D RAN89_04135 dacB; (GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D RAN89_14260 clpP; (GenBank) ATP-dependent Clp endopeptidase proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D RAN89_14250 lon; (GenBank) endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D RAN89_14190 lexA; (GenBank) transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D RAN89_10485 umuD; (GenBank) translesion error-prone DNA polymerase V autoproteolytic subunit K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D RAN89_08885 lepB; (GenBank) signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D RAN89_07755 S41 family peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D RAN89_14300 penicillin acylase family protein K01434 pac; penicillin G amidase [EC:3.5.1.11]
D RAN89_08805 S49 family peptidase K04773 sppA; protease IV [EC:3.4.21.-]
D RAN89_08925 rrtA; (GenBank) rhombosortase K28165 rrtA; rhombosortase
D RAN89_12005 LD-carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D RAN89_05510 hslV; (GenBank) ATP-dependent protease subunit HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D RAN89_14755 gamma-glutamyltransferase family protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RAN89_12240 U32 family peptidase K24847 rlhA; 23S rRNA 5-hydroxycytidine C2501 synthase
D RAN89_15830 pmbA; (GenBank) metalloprotease PmbA K03592 pmbA; PmbA protein
D RAN89_05670 tldD; (GenBank) metalloprotease TldD K03568 tldD; TldD protein
D RAN89_08655 MG2 domain-containing protein K06894 yfhM; alpha-2-macroglobulin
D RAN89_11305 hflC; (GenBank) protease modulator HflC K04087 hflC; modulator of FtsH protease HflC
D RAN89_11300 hflK; (GenBank) FtsH protease activity modulator HflK K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases [BR:rmk01003]
D RAN89_10015 glycosyltransferase family 1 protein K27597 K27597; 1,2-diacylglycerol 3-alpha-glucosyltransferase/glucuronosyltransferase [EC:2.4.1.337 2.4.1.-]
D RAN89_11530 glgA; (GenBank) glycogen synthase GlgA K00703 glgA; starch synthase [EC:2.4.1.21]
D RAN89_05625 mtgA; (GenBank) monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D RAN89_08620 pbpC; (GenBank) penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D RAN89_03405 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D RAN89_07030 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D RAN89_05560 ftsW; (GenBank) putative lipid II flippase FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D RAN89_05660 rodA; (GenBank) rod shape-determining protein RodA K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D RAN89_07410 WecB/TagA/CpsF family glycosyltransferase K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:rmk01005]
D RAN89_09890 lpxA; (GenBank) acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D RAN89_09895 lpxB; (GenBank) lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D RAN89_05595 lpxC; (GenBank) UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D RAN89_08515 phosphatase PAP2 family protein K12978 lpxF; lipid A 4'-phosphatase [EC:3.1.3.-]
D RAN89_10885 UDP-2,3-diacylglucosamine diphosphatase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D RAN89_14165 lpxK; (GenBank) tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D RAN89_06980 lysophospholipid acyltransferase family protein K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D RAN89_06985 lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D RAN89_16590 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D RAN89_15380 kdsA; (GenBank) 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D RAN89_14175 kdsB; (GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D RAN89_03220 HAD hydrolase family protein K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D RAN89_03215 KpsF/GutQ family sugar-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D RAN89_09365 rfaE1; (GenBank) D-glycero-beta-D-manno-heptose-7-phosphate kinase K21344 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase [EC:2.7.1.167]
D RAN89_03910 rfaE2; (GenBank) D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase K21345 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase [EC:2.7.7.70]
D RAN89_16595 waaC; (GenBank) lipopolysaccharide heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D RAN89_01820 waaF; (GenBank) lipopolysaccharide heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D RAN89_01260 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D RAN89_05870 SIS domain-containing protein K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D RAN89_18550 gmhB; (GenBank) D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D RAN89_09360 rfaD; (GenBank) ADP-glyceromanno-heptose 6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D RAN89_05175 glycosyltransferase family 2 protein K25198 rfbQ; O-antigen biosynthesis alpha-1,2-rahmnosyltransferase [EC:2.4.1.381]
D RAN89_05220 sugar transferase K13012 wbqP; O-antigen biosynthesis protein WbqP
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:rmk01011]
D RAN89_18310 murA; (GenBank) UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D RAN89_16740 murB; (GenBank) UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D RAN89_05570 murC; (GenBank) UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D RAN89_05555 murD; (GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D RAN89_05540 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D RAN89_05575 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RAN89_01885 alr; (GenBank) alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D RAN89_10340 murI; (GenBank) glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D RAN89_12005 LD-carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D RAN89_05550 mraY; (GenBank) phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D RAN89_05565 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D RAN89_15895 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D RAN89_14995 murJ; (GenBank) murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D RAN89_03405 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D RAN89_07030 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D RAN89_08620 pbpC; (GenBank) penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D RAN89_01715 mrdA; (GenBank) penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D RAN89_05535 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D RAN89_01610 D-alanyl-D-alanine carboxypeptidase family protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D RAN89_04135 dacB; (GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D RAN89_10300 serine hydrolase K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-]
D RAN89_05625 mtgA; (GenBank) monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D RAN89_05560 ftsW; (GenBank) putative lipid II flippase FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D RAN89_05660 rodA; (GenBank) rod shape-determining protein RodA K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D RAN89_18005 transglycosylase SLT domain-containing protein K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D RAN89_03935 MltA domain-containing protein K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29]
D RAN89_14880 mltB; (GenBank) lytic murein transglycosylase B K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D RAN89_10160 transglycosylase SLT domain-containing protein K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D RAN89_12045 mltG; (GenBank) endolytic transglycosylase MltG K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D RAN89_05735 ampD; (GenBank) 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:rmk01004]
D RAN89_08840 fabD; (GenBank) ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D RAN89_08835 beta-ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D RAN89_08855 fabF; (GenBank) beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D RAN89_08290 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RAN89_08845 fabG; (GenBank) 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RAN89_09885 fabZ; (GenBank) 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D RAN89_11885 fabI; (GenBank) enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D RAN89_11345 arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D RAN89_05360 acyl-CoA thioesterase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
D RAN89_08435 fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D RAN89_10350 acs; (GenBank) acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RAN89_16785 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RAN89_04265 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D RAN89_05050 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D RAN89_05335 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D RAN89_06610 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D RAN89_08230 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D RAN89_08830 plsX; (GenBank) phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D RAN89_16760 plsY; (GenBank) glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D RAN89_05945 lysophospholipid acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D RAN89_09755 1-acylglycerol-3-phosphate O-acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D RAN89_18545 lysophospholipid acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:rmk01006]
D RAN89_09315 polyprenyl synthetase family protein K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D RAN89_07540 polyprenyl synthetase family protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D RAN89_09850 uppS; (GenBank) polyprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D RAN89_14290 hpnD; (GenBank) presqualene diphosphate synthase HpnD K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D RAN89_00935 ubiA; (GenBank) 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D RAN89_06590 cyoE; (GenBank) heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:rmk01007]
D RAN89_16650 gltX; (GenBank) glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RAN89_15970 glutamine--tRNA ligase/YqeY domain fusion protein K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D RAN89_14470 gluQRS; (GenBank) tRNA glutamyl-Q(34) synthetase GluQRS K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D RAN89_18200 tyrS; (GenBank) tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RAN89_08185 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D RAN89_10910 cysS; (GenBank) cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D RAN89_00920 argS; (GenBank) arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RAN89_07940 metG; (GenBank) methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D RAN89_08340 ileS; (GenBank) isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D RAN89_08540 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D RAN89_04325 leuS; (GenBank) leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RAN89_08985 lysS; (GenBank) lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D RAN89_07700 aspS; (GenBank) aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RAN89_11270 hisS; (GenBank) histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D RAN89_18560 glyQ; (GenBank) glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D RAN89_18555 glyS; (GenBank) glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D RAN89_08140 serS; (GenBank) serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D RAN89_07575 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D RAN89_13010 thrS; (GenBank) threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D RAN89_14565 alaS; (GenBank) alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D RAN89_12990 pheS; (GenBank) phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D RAN89_12985 pheT; (GenBank) phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D RAN89_13275 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D RAN89_10720 amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D RAN89_11825 pyridoxal phosphate-dependent aminotransferase K14287 ybdL; methionine transaminase [EC:2.6.1.88]
D RAN89_12300 dapC; (GenBank) succinyldiaminopimelate transaminase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
D RAN89_07190 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RAN89_02185 aspartate aminotransferase family protein K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D RAN89_14605 gabT; (GenBank) 4-aminobutyrate--2-oxoglutarate transaminase K14268 davT; 5-aminovalerate/4-aminobutyrate aminotransferase [EC:2.6.1.48 2.6.1.19]
D RAN89_15015 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D RAN89_13045 aspartate aminotransferase family protein K12256 spuC; putrescine---pyruvate transaminase [EC:2.6.1.113]
D RAN89_05875 hemL; (GenBank) glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D RAN89_06485 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D RAN89_06795 aspartate aminotransferase family protein K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D RAN89_01830 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RAN89_14505 pabB; (GenBank) aminodeoxychorismate synthase component I K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38]
D RAN89_09405 serC; (GenBank) 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:rmk00194]
D RAN89_01415 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D RAN89_01420 atpD; (GenBank) F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D RAN89_01425 atpG; (GenBank) F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D RAN89_01430 atpA; (GenBank) F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D RAN89_01435 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D RAN89_01440 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D RAN89_01445 atpE; (GenBank) F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D RAN89_01455 ATP synthase subunit I K02116 atpI; ATP synthase protein I
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:rmk03000]
D RAN89_16710 dcm; (GenBank) DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RAN89_05425 helix-turn-helix domain-containing protein K04033 eutR; AraC family transcriptional regulator, ethanolamine operon transcriptional activator
D RAN89_03620 AraC family transcriptional regulator K13652 K13652; AraC family transcriptional regulator
D RAN89_13650 GyrI-like domain-containing protein K13652 K13652; AraC family transcriptional regulator
D RAN89_16605 Ada metal-binding domain-containing protein K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D RAN89_01125 LysR substrate-binding domain-containing protein K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D RAN89_15585 LysR substrate-binding domain-containing protein K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D RAN89_02605 nhaR; (GenBank) transcriptional activator NhaR K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA
D RAN89_17630 LysR family transcriptional regulator K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA
D RAN89_00940 LysR substrate-binding domain-containing protein K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D RAN89_02170 LysR family transcriptional regulator ArgP K05596 argP; LysR family transcriptional regulator, arginine and lysine transport system/DNA replication regulator
D RAN89_15255 LysR family transcriptional regulator ArgP K05596 argP; LysR family transcriptional regulator, arginine and lysine transport system/DNA replication regulator
D RAN89_11830 CysB family HTH-type transcriptional regulator K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator
D RAN89_02490 CysB family HTH-type transcriptional regulator K13635 cbl; LysR family transcriptional regulator, cys regulon transcriptional activator
D RAN89_04775 LysR substrate-binding domain-containing protein K19338 nac; LysR family transcriptional regulator, nitrogen assimilation regulatory protein
D RAN89_05380 LysR substrate-binding domain-containing protein K21645 hypT; LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT
D RAN89_02180 LysR family transcriptional regulator K21699 bauR; LysR family transcriptional regulator, transcriptional activator for bauABCD operon
D RAN89_03945 LysR family transcriptional regulator K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
D RAN89_04715 LysR family transcriptional regulator K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
D RAN89_10575 LysR family transcriptional regulator K21757 benM; LysR family transcriptional regulator, benzoate and cis,cis-muconate-responsive activator of ben and cat genes
D RAN89_04600 DeoR/GlpR family DNA-binding transcription regulator K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D RAN89_18265 substrate-binding domain-containing protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D RAN89_15575 LacI family DNA-binding transcriptional regulator K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
D RAN89_16525 phnF; (GenBank) phosphonate metabolism transcriptional regulator PhnF K02043 phnF; GntR family transcriptional regulator, phosphonate transport system regulatory protein
D RAN89_15130 hutC; (GenBank) histidine utilization repressor K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor
D RAN89_03605 GntR family transcriptional regulator K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
D RAN89_09090 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D RAN89_03500 PLP-dependent aminotransferase family protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D RAN89_13055 PLP-dependent aminotransferase family protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D RAN89_15280 TetR family transcriptional regulator K03577 acrR; TetR/AcrR family transcriptional regulator, acrAB operon repressor
D RAN89_02640 TetR/AcrR family transcriptional regulator K09017 rutR; TetR/AcrR family transcriptional regulator
D RAN89_05295 TetR/AcrR family transcriptional regulator K22108 kstR2; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator
D RAN89_09265 CerR family C-terminal domain-containing protein K23777 cecR; TetR/AcrR family transcriptional regulator, regulator of cefoperazone and chloramphenicol sensitivity
D RAN89_01225 Lrp/AsnC ligand binding domain-containing protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D RAN89_02930 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D RAN89_03995 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D RAN89_06685 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D RAN89_15035 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D RAN89_17965 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D RAN89_13140 Lrp/AsnC family transcriptional regulator K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
D RAN89_04475 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D RAN89_02835 cueR; (GenBank) Cu(I)-responsive transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D RAN89_04300 fur; (GenBank) ferric iron uptake transcriptional regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D RAN89_16450 Fur family transcriptional regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D RAN89_01355 IclR family transcriptional regulator C-terminal domain-containing protein K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein
D RAN89_10580 IclR family transcriptional regulator K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein
D RAN89_14690 IclR family transcriptional regulator C-terminal domain-containing protein K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein
D RAN89_03430 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RAN89_05045 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RAN89_08455 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RAN89_14205 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RAN89_10465 fnr; (GenBank) fumarate/nitrate reduction transcriptional regulator Fnr K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D RAN89_16990 Crp/Fnr family transcriptional regulator K21563 dnr; CRP/FNR family transcriptional regulator, dissimilatory nitrate respiration regulator
D RAN89_02600 Rrf2 family transcriptional regulator K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D RAN89_10735 iscR; (GenBank) Fe-S cluster assembly transcriptional regulator IscR K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D RAN89_10000 metalloregulator ArsR/SmtB family transcription factor K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D RAN89_02580 metalloregulator ArsR/SmtB family transcription factor K22042 hlyU; ArsR family transcriptional regulator, virulence genes transcriptional regulator
D RAN89_17810 SIS domain-containing protein K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator
D RAN89_03720 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D RAN89_05860 Fis family transcriptional regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D RAN89_04180 sigma-54-dependent Fis family transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D RAN89_01215 L-glutamate gamma-semialdehyde dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D RAN89_12220 BolA family protein K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D RAN89_02750 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RAN89_17425 hrcA; (GenBank) heat-inducible transcriptional repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D RAN89_05930 pyrR; (GenBank) bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D RAN89_09480 AlpA family phage regulatory protein K07733 alpA; prophage regulatory protein
D RAN89_06895 FMN-binding negative transcriptional regulator K07734 paiB; transcriptional regulator
D RAN89_05920 YqgE/AlgH family protein K07735 algH; putative transcriptional regulator
D RAN89_05500 dksA; (GenBank) RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D RAN89_10860 nrdR; (GenBank) transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR
D RAN89_05520 mraZ; (GenBank) division/cell wall cluster transcriptional repressor MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:rmk03021]
D RAN89_04685 rpoA; (GenBank) DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D RAN89_00605 rpoB; (GenBank) DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D RAN89_00600 rpoC; (GenBank) DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D RAN89_17335 rpoZ; (GenBank) DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D RAN89_14770 rpoD; (GenBank) RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D RAN89_13435 sigma-70 family RNA polymerase sigma factor K03087 rpoS; RNA polymerase nonessential primary-like sigma factor
D RAN89_08680 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D RAN89_08860 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D RAN89_10270 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D RAN89_11955 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D RAN89_06605 rpoH; (GenBank) RNA polymerase sigma factor RpoH K03089 rpoH; RNA polymerase sigma-32 factor
D RAN89_00890 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D RAN89_00335 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
D RAN89_03015 FliA/WhiG family RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA
D RAN89_11915 nusA; (GenBank) transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D RAN89_14390 nusB; (GenBank) transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D RAN89_00630 nusG; (GenBank) transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D RAN89_07290 glutathione S-transferase N-terminal domain-containing protein K03599 sspA; stringent starvation protein A
D RAN89_07295 ClpXP protease specificity-enhancing factor K03600 sspB; stringent starvation protein B
D RAN89_04915 alpha/beta hydrolase K19707 rsbQ; sigma-B regulation protein RsbQ
D RAN89_08870 MucB/RseB C-terminal domain-containing protein K03598 rseB; sigma-E factor negative regulatory protein RseB
D RAN89_05500 dksA; (GenBank) RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D RAN89_09925 greA; (GenBank) transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D RAN89_17345 greB; (GenBank) transcription elongation factor GreB K04760 greB; transcription elongation factor GreB
D RAN89_10105 rho; (GenBank) transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:rmk03019]
D RAN89_08785 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12]
D RAN89_12485 rng; (GenBank) ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D RAN89_08895 rnc; (GenBank) ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D RAN89_09805 rnr; (GenBank) ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D RAN89_03345 ribonuclease K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24]
D RAN89_09180 orn; (GenBank) oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D RAN89_01340 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D RAN89_16355 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D RAN89_16910 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D RAN89_02075 recQ; (GenBank) DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D RAN89_15385 eno; (GenBank) phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RAN89_15735 pnp; (GenBank) polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D RAN89_10105 rho; (GenBank) transcription termination factor Rho K03628 rho; transcription termination factor Rho
D RAN89_14800 dnaK; (GenBank) molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D RAN89_00480 groL; (GenBank) chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RAN89_17775 groL; (GenBank) chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RAN89_11290 hfq; (GenBank) RNA chaperone Hfq K03666 hfq; host factor-I protein
D RAN89_10020 ppk1; (GenBank) polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D RAN89_16230 ppk2; (GenBank) polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D RAN89_14960 pcnB; (GenBank) polynucleotide adenylyltransferase PcnB K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D RAN89_07570 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D RAN89_13075 rraA; (GenBank) ribonuclease E activity regulator RraA K02553 rraA; regulator of ribonuclease activity A
D RAN89_17440 rapZ; (GenBank) RNase adapter RapZ K06958 rapZ; RNase adapter protein RapZ
D RAN89_11810 hrpA; (GenBank) ATP-dependent RNA helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:rmk03011]
D RAN89_09385 rpsA; (GenBank) 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D RAN89_09830 rpsB; (GenBank) 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D RAN89_01550 rpsC; (GenBank) 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D RAN89_04680 rpsD; (GenBank) 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D RAN89_04645 rpsE; (GenBank) 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D RAN89_13315 rpsF; (GenBank) 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D RAN89_01600 rpsG; (GenBank) 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D RAN89_04630 rpsH; (GenBank) 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D RAN89_18230 rpsI; (GenBank) 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D RAN89_01585 rpsJ; (GenBank) 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D RAN89_04675 rpsK; (GenBank) 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D RAN89_01605 rpsL; (GenBank) 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D RAN89_04670 rpsM; (GenBank) 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D RAN89_04625 rpsN; (GenBank) 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D RAN89_15740 rpsO; (GenBank) 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D RAN89_09135 rpsP; (GenBank) 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D RAN89_01535 rpsQ; (GenBank) 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D RAN89_13305 rpsR; (GenBank) 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D RAN89_01560 rpsS; (GenBank) 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D RAN89_15005 rpsT; (GenBank) 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D RAN89_15820 rpsU; (GenBank) 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D RAN89_00620 rplA; (GenBank) 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D RAN89_01565 rplB; (GenBank) 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D RAN89_01580 rplC; (GenBank) 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D RAN89_01575 rplD; (GenBank) 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D RAN89_04620 rplE; (GenBank) 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D RAN89_04635 rplF; (GenBank) 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D RAN89_13300 rplI; (GenBank) 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D RAN89_00615 rplJ; (GenBank) 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D RAN89_00625 rplK; (GenBank) 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D RAN89_00610 rplL; (GenBank) 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D RAN89_18235 rplM; (GenBank) 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D RAN89_04610 rplN; (GenBank) 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D RAN89_04655 rplO; (GenBank) 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D RAN89_01545 rplP; (GenBank) 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D RAN89_04690 rplQ; (GenBank) 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D RAN89_04640 rplR; (GenBank) 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D RAN89_09150 rplS; (GenBank) 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D RAN89_12995 rplT; (GenBank) 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D RAN89_07545 rplU; (GenBank) 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D RAN89_01555 rplV; (GenBank) 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D RAN89_01570 rplW; (GenBank) 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D RAN89_04615 rplX; (GenBank) 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D RAN89_07550 rpmA; (GenBank) 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D RAN89_08445 rpmB; (GenBank) 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D RAN89_01540 rpmC; (GenBank) 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D RAN89_04650 rpmD; (GenBank) 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D RAN89_10100 type B 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D RAN89_08825 rpmF; (GenBank) 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D RAN89_08440 rpmG; (GenBank) 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D RAN89_03175 rpmH; (GenBank) 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D RAN89_13000 rpmI; (GenBank) 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D RAN89_04665 rpmJ; (GenBank) 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D RAN89_17485 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25
D RAN89_00025 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RAN89_00050 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RAN89_00075 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RAN89_00100 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RAN89_00010 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RAN89_00035 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RAN89_00060 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RAN89_00085 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RAN89_00005 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D RAN89_00030 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D RAN89_00055 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D RAN89_00080 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 03009 Ribosome biogenesis [BR:rmk03009]
D RAN89_08895 rnc; (GenBank) ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D RAN89_09180 orn; (GenBank) oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D RAN89_08900 era; (GenBank) GTPase Era K03595 era; GTPase
D RAN89_07555 obgE; (GenBank) GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-]
D RAN89_05500 dksA; (GenBank) RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D RAN89_11915 nusA; (GenBank) transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D RAN89_14390 nusB; (GenBank) transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D RAN89_00630 nusG; (GenBank) transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D RAN89_09560 16S rRNA pseudouridine(516) synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D RAN89_03330 rsmA; (GenBank) 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D RAN89_00590 rsmB; (GenBank) 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D RAN89_08430 RsmB/NOP family class I SAM-dependent RNA methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D RAN89_17515 rsmD; (GenBank) 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D RAN89_03310 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D RAN89_02775 rsmG; (GenBank) 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D RAN89_05525 rsmH; (GenBank) 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D RAN89_01270 rsmI; (GenBank) 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D RAN89_08810 SAM-dependent methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D RAN89_18255 TlyA family RNA methyltransferase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D RAN89_11360 rlmB; (GenBank) 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D RAN89_09940 RlmE family RNA methyltransferase K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D RAN89_12495 rlmH; (GenBank) 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D RAN89_05490 class I SAM-dependent rRNA methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D RAN89_17605 class I SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D RAN89_18245 rlmJ; (GenBank) 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266]
D RAN89_00885 THUMP domain-containing protein K25137 rlmL; 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.173]
D RAN89_11250 rlmN; (GenBank) 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D RAN89_13430 rlmD; (GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D RAN89_08205 RluA family pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D RAN89_14485 pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D RAN89_11240 pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D RAN89_08790 RluA family pseudouridine synthase K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D RAN89_11230 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D RAN89_08975 pseudouridine synthase K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
D RAN89_05025 pseudouridine synthase K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
D RAN89_05460 S4 domain-containing protein K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
D RAN89_04145 rimI; (GenBank) ribosomal protein S18-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D RAN89_09140 rimM; (GenBank) ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM
D RAN89_09795 rimO; (GenBank) 30S ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D RAN89_05710 prmA; (GenBank) 50S ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D RAN89_12320 prmB; (GenBank) 50S ribosomal protein L3 N(5)-glutamine methyltransferase K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298]
D RAN89_15355 cupin domain-containing protein K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47]
D RAN89_08785 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12]
D RAN89_12485 rng; (GenBank) ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D RAN89_05925 ruvX; (GenBank) Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D RAN89_04910 dbpA; (GenBank) ATP-dependent RNA helicase DbpA K05591 dbpA; ATP-dependent RNA helicase DbpA [EC:5.6.2.6]
D RAN89_09165 rsgA; (GenBank) ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D RAN89_11285 der; (GenBank) ribosome biogenesis GTPase Der K03977 engA; GTPase
D RAN89_16095 ylqF; (GenBank) ribosome biogenesis GTPase YlqF K14540 rbgA; ribosome biogenesis GTPase A
D RAN89_11295 hflX; (GenBank) GTPase HflX K03665 hflX; GTPase
D RAN89_04130 L-threonylcarbamoyladenylate synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D RAN89_17340 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D RAN89_11925 rbfA; (GenBank) 30S ribosome-binding factor RbfA K02834 rbfA; ribosome-binding factor A
D RAN89_11910 rimP; (GenBank) ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP
D RAN89_12500 rsfS; (GenBank) ribosome silencing factor K09710 ybeB; ribosome-associated protein
D RAN89_18165 ybeY; (GenBank) rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor
D RAN89_09935 YhbY family RNA-binding protein K07574 yhbY; RNA-binding protein
D RAN89_15835 yjgA; (GenBank) ribosome biogenesis factor YjgA K09889 yjgA; ribosome-associated protein
D RAN89_04285 raiA; (GenBank) ribosome-associated translation inhibitor RaiA K05808 hpf; ribosome hibernation promoting factor
D RAN89_05835 ychF; (GenBank) redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase
D RAN89_08820 YceD family protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:rmk03016]
D RAN89_03345 ribonuclease K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24]
D RAN89_18025 multifunctional CCA addition/repair protein K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D RAN89_16650 gltX; (GenBank) glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RAN89_07575 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D RAN89_08340 ileS; (GenBank) isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D RAN89_04325 leuS; (GenBank) leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RAN89_07940 metG; (GenBank) methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D RAN89_15970 glutamine--tRNA ligase/YqeY domain fusion protein K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D RAN89_00920 argS; (GenBank) arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RAN89_08985 lysS; (GenBank) lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D RAN89_07700 aspS; (GenBank) aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RAN89_14565 alaS; (GenBank) alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D RAN89_13010 thrS; (GenBank) threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D RAN89_08140 serS; (GenBank) serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D RAN89_10910 cysS; (GenBank) cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D RAN89_08540 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D RAN89_11270 hisS; (GenBank) histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D RAN89_12990 pheS; (GenBank) phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D RAN89_12985 pheT; (GenBank) phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D RAN89_18200 tyrS; (GenBank) tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RAN89_08185 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D RAN89_18175 dtd; (GenBank) D-aminoacyl-tRNA deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D RAN89_07230 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D RAN89_14480 trmB; (GenBank) tRNA (guanosine(46)-N7)-methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D RAN89_09020 truA; (GenBank) tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D RAN89_11930 truB; (GenBank) tRNA pseudouridine(55) synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D RAN89_10740 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RAN89_13135 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RAN89_04130 L-threonylcarbamoyladenylate synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D RAN89_03195 mnmE; (GenBank) tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D RAN89_02780 mnmG; (GenBank) tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D RAN89_03180 ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D RAN89_05450 rnpB; (GenBank) RNase P RNA component class A K01978 rnpB; RNase P catalytic RNA component
D RAN89_17310 rph; (GenBank) ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D RAN89_05635 RNB domain-containing ribonuclease K01147 rnb; exoribonuclease II [EC:3.1.13.1]
D RAN89_16345 ettA; (GenBank) energy-dependent translational throttle protein EttA K06020 ettA; energy-dependent translational throttle protein EttA
D RAN89_18560 glyQ; (GenBank) glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D RAN89_18555 glyS; (GenBank) glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D RAN89_14470 gluQRS; (GenBank) tRNA glutamyl-Q(34) synthetase GluQRS K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D RAN89_10620 dusA; (GenBank) tRNA dihydrouridine(20/20a) synthase DusA K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
D RAN89_05855 dusB; (GenBank) tRNA dihydrouridine synthase DusB K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D RAN89_16125 tRNA-dihydrouridine synthase K05541 dusC; tRNA-dihydrouridine synthase C [EC:1.-.-.-]
D RAN89_05780 miaB; (GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D RAN89_15850 RNA methyltransferase K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-]
D RAN89_09145 trmD; (GenBank) tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D RAN89_06520 trmL; (GenBank) tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D RAN89_09905 RNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family
D RAN89_08205 RluA family pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D RAN89_14485 pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D RAN89_04240 mnmA; (GenBank) tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D RAN89_18115 ttcA; (GenBank) tRNA 2-thiocytidine(32) synthetase TtcA K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D RAN89_08535 sulfurtransferase TusA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D RAN89_10750 iscA; (GenBank) iron-sulfur cluster assembly protein IscA K13628 iscA; iron-sulfur cluster assembly protein
D RAN89_12050 folate-binding protein K06980 ygfZ; tRNA-modifying protein YgfZ
D RAN89_11790 FAD-dependent oxidoreductase K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-]
D RAN89_00975 queA; (GenBank) tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D RAN89_13965 7-cyano-7-deazaguanine synthase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D RAN89_17930 queC; (GenBank) 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D RAN89_16935 6-carboxytetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D RAN89_16940 queE; (GenBank) 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D RAN89_08575 queF; (GenBank) NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D RAN89_15450 queG; (GenBank) tRNA epoxyqueuosine(34) reductase QueG K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D RAN89_05845 mnmH; (GenBank) tRNA 2-selenouridine(34) synthase MnmH K06917 selU; tRNA 2-selenouridine synthase [EC:2.9.1.3]
D RAN89_00990 tgt; (GenBank) tRNA guanosine(34) transglycosylase Tgt K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D RAN89_10925 tilS; (GenBank) tRNA lysidine(34) synthetase TilS K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D RAN89_04140 tsaB; (GenBank) tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D RAN89_15750 tsaD; (GenBank) tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D RAN89_15455 tsaE; (GenBank) tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D RAN89_12340 tRNA threonylcarbamoyladenosine dehydratase K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D RAN89_09805 rnr; (GenBank) ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D RAN89_15735 pnp; (GenBank) polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D RAN89_06715 type II toxin-antitoxin system VapC family toxin K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
C 03012 Translation factors [BR:rmk03012]
D RAN89_08960 translation initiation factor Sui1 K03113 EIF1; translation initiation factor 1
D RAN89_11920 infB; (GenBank) translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D RAN89_13005 infC; (GenBank) translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D RAN89_12325 ATP-binding cassette domain-containing protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D RAN89_09835 tsf; (GenBank) translation elongation factor Ts K02357 tsf; elongation factor Ts
D RAN89_00645 tuf; (GenBank) elongation factor Tu K02358 tuf; elongation factor Tu
D RAN89_01590 tuf; (GenBank) elongation factor Tu K02358 tuf; elongation factor Tu
D RAN89_01595 fusA; (GenBank) elongation factor G K02355 fusA; elongation factor G
D RAN89_09845 frr; (GenBank) ribosome recycling factor K02838 frr; ribosome recycling factor
D RAN89_07605 prmC; (GenBank) peptide chain release factor N(5)-glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D RAN89_17490 pth; (GenBank) aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D RAN89_02945 infA; (GenBank) translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D RAN89_14065 efp; (GenBank) elongation factor P K02356 efp; elongation factor P
D RAN89_16810 prfB; (GenBank) peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D RAN89_18270 peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
D RAN89_09510 arfB; (GenBank) alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB K15034 yaeJ; ribosome-associated protein
C 03110 Chaperones and folding catalysts [BR:rmk03110]
D RAN89_14120 clpA; (GenBank) ATP-dependent Clp protease ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D RAN89_13235 clpB; (GenBank) ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D RAN89_14255 clpX; (GenBank) ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D RAN89_05515 hslU; (GenBank) ATP-dependent protease ATPase subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D RAN89_05005 htpG; (GenBank) molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D RAN89_14800 dnaK; (GenBank) molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D RAN89_17570 Hsp70 family protein K04046 yegD; hypothetical chaperone protein
D RAN89_00480 groL; (GenBank) chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RAN89_17775 groL; (GenBank) chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RAN89_14805 dnaJ; (GenBank) molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D RAN89_10755 hscB; (GenBank) Fe-S protein assembly co-chaperone HscB K04082 hscB; molecular chaperone HscB
D RAN89_15400 Hsp33 family molecular chaperone HslO K04083 hslO; molecular chaperone Hsp33
D RAN89_14795 grpE; (GenBank) nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D RAN89_15745 Hsp20/alpha crystallin family protein K13993 HSP20; HSP20 family protein
D RAN89_14375 RNA-binding S4 domain-containing protein K04762 hslR; ribosome-associated heat shock protein Hsp15
D RAN89_00475 co-chaperone GroES K04078 groES; chaperonin GroES
D RAN89_17770 co-chaperone GroES K04078 groES; chaperonin GroES
D RAN89_08360 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107]
D RAN89_08875 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107]
D RAN89_18480 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107]
D RAN89_09945 ftsH; (GenBank) ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D RAN89_07775 secB; (GenBank) protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D RAN89_18335 Spy/CpxP family protein refolding chaperone K06006 cpxP; periplasmic protein CpxP/Spy
D RAN89_01015 copper chaperone PCu(A)C K09796 pccA; periplasmic copper chaperone A
D RAN89_01020 YcnI family protein K09796 pccA; periplasmic copper chaperone A
D RAN89_08930 S8 family serine peptidase K14645 K14645; serine protease [EC:3.4.21.-]
D RAN89_10895 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D RAN89_10890 peptidylprolyl isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D RAN89_14035 SurA N-terminal domain-containing protein K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D RAN89_04970 FKBP-type peptidyl-prolyl cis-trans isomerase K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8]
D RAN89_14790 FKBP-type peptidyl-prolyl cis-trans isomerase K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8]
D RAN89_08130 FKBP-type peptidyl-prolyl cis-trans isomerase K03774 slpA; FKBP-type peptidyl-prolyl cis-trans isomerase SlpA [EC:5.2.1.8]
D RAN89_07595 peptidylprolyl isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D RAN89_15360 FKBP-type peptidyl-prolyl cis-trans isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D RAN89_12225 peptidylprolyl isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D RAN89_03325 peptidylprolyl isomerase K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D RAN89_10110 trxA; (GenBank) thioredoxin TrxA K03671 TXN; thioredoxin
D RAN89_16030 trxC; (GenBank) thioredoxin TrxC K03672 trxC; thioredoxin 2 [EC:1.8.1.8]
D RAN89_04115 trxA; (GenBank) thioredoxin K05838 ybbN; putative thioredoxin
D RAN89_07770 grxC; (GenBank) glutaredoxin 3 K03676 grxC; glutaredoxin 3
D RAN89_07590 grxD; (GenBank) Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin
D RAN89_00910 thiol:disulfide interchange protein DsbA/DsbL K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D RAN89_11800 disulfide bond formation protein B K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9]
D RAN89_05810 DsbC family protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D RAN89_16060 DsbC family protein K03805 dsbG; thiol:disulfide interchange protein DsbG
C 04131 Membrane trafficking [BR:rmk04131]
D RAN89_11245 ndk; (GenBank) nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D RAN89_09285 TMEM165/GDT1 family protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D RAN89_09975 arsA; (GenBank) arsenical pump-driving ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D RAN89_03425 gap; (GenBank) type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RAN89_07760 gpmA; (GenBank) 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D RAN89_04070 pyk; (GenBank) pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RAN89_05005 htpG; (GenBank) molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system
C 03051 Proteasome [BR:rmk03051]
D RAN89_05005 htpG; (GenBank) molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:rmk03032]
D RAN89_10175 rnhA; (GenBank) ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D RAN89_16710 dcm; (GenBank) DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RAN89_13510 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D RAN89_14045 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D RAN89_12980 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D RAN89_09380 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D RAN89_03170 dnaA; (GenBank) chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D RAN89_13295 dnaB; (GenBank) replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D RAN89_14760 dnaG; (GenBank) DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D RAN89_04195 ssb; (GenBank) single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RAN89_05980 ssb; (GenBank) single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RAN89_14425 dnaE; (GenBank) DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RAN89_03165 dnaN; (GenBank) DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RAN89_11855 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D RAN89_04350 holA; (GenBank) DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RAN89_12035 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RAN89_10770 dnaQ; (GenBank) DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RAN89_11580 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RAN89_12955 exonuclease domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RAN89_10140 dnaX; (GenBank) DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RAN89_09900 rnhB; (GenBank) ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D RAN89_09240 polA; (GenBank) DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RAN89_12280 ligA; (GenBank) NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D RAN89_13520 Dam family site-specific DNA-(adenine-N6)-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D RAN89_14970 hda; (GenBank) DnaA regulatory inactivator Hda K10763 hda; DnaA-homolog protein
D RAN89_03160 gyrB; (GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D RAN89_15310 parC; (GenBank) DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D RAN89_15320 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
C 03036 Chromosome and associated proteins [BR:rmk03036]
D RAN89_16710 dcm; (GenBank) DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RAN89_08895 rnc; (GenBank) ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D RAN89_05225 H-NS histone family protein K03746 hns; DNA-binding protein H-NS
D RAN89_13525 H-NS histone family protein K03746 hns; DNA-binding protein H-NS
D RAN89_13510 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D RAN89_14045 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D RAN89_12980 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D RAN89_09380 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D RAN89_03170 dnaA; (GenBank) chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D RAN89_05860 Fis family transcriptional regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D RAN89_11290 hfq; (GenBank) RNA chaperone Hfq K03666 hfq; host factor-I protein
D RAN89_02170 LysR family transcriptional regulator ArgP K05596 argP; LysR family transcriptional regulator, arginine and lysine transport system/DNA replication regulator
D RAN89_15255 LysR family transcriptional regulator ArgP K05596 argP; LysR family transcriptional regulator, arginine and lysine transport system/DNA replication regulator
D RAN89_01225 Lrp/AsnC ligand binding domain-containing protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D RAN89_02930 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D RAN89_03995 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D RAN89_06685 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D RAN89_15035 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D RAN89_17965 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D RAN89_12290 smc; (GenBank) chromosome segregation protein SMC K03529 smc; chromosome segregation protein
D RAN89_07820 ScpA family protein K05896 scpA; segregation and condensation protein A
D RAN89_11235 scpB; (GenBank) SMC-Scp complex subunit ScpB K06024 scpB; segregation and condensation protein B
D RAN89_05585 ftsA; (GenBank) cell division protein FtsA K03590 ftsA; cell division protein FtsA
D RAN89_15390 septum formation initiator family protein K05589 ftsB; cell division protein FtsB
D RAN89_05535 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D RAN89_08460 DNA translocase FtsK 4TM domain-containing protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D RAN89_05530 ftsL; (GenBank) cell division protein FtsL K03586 ftsL; cell division protein FtsL
D RAN89_05580 cell division protein FtsQ/DivIB K03589 ftsQ; cell division protein FtsQ
D RAN89_05560 ftsW; (GenBank) putative lipid II flippase FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D RAN89_05590 ftsZ; (GenBank) cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D RAN89_12895 cell division protein ZapA K09888 zapA; cell division protein ZapA
D RAN89_12890 DUF904 domain-containing protein K09892 zapB; cell division protein ZapB
D RAN89_07340 zapD; (GenBank) cell division protein ZapD K18778 zapD; cell division protein ZapD
D RAN89_11200 zapE; (GenBank) cell division protein ZapE K06916 zapE; cell division protein ZapE
D RAN89_09275 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D RAN89_15285 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D RAN89_16490 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D RAN89_02910 minC; (GenBank) septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D RAN89_02915 minD; (GenBank) septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D RAN89_02920 minE; (GenBank) cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D RAN89_01730 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D RAN89_01720 mreD; (GenBank) rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D RAN89_05660 rodA; (GenBank) rod shape-determining protein RodA K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D RAN89_02765 ParA family protein K03496 parA; chromosome partitioning protein
D RAN89_03400 ParA family protein K03496 parA; chromosome partitioning protein
D RAN89_06510 ParA family protein K03496 parA; chromosome partitioning protein
D RAN89_14985 ParA family protein K03496 parA; chromosome partitioning protein
D RAN89_02750 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RAN89_15310 parC; (GenBank) DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D RAN89_15320 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D RAN89_02780 mnmG; (GenBank) tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D RAN89_02775 rsmG; (GenBank) 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D RAN89_05480 tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D RAN89_15420 xerD; (GenBank) site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D RAN89_07985 apbC; (GenBank) iron-sulfur cluster carrier protein ApbC K03593 mrp; ATP-binding protein involved in chromosome partitioning
D RAN89_16720 Fic family protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
C 03400 DNA repair and recombination proteins [BR:rmk03400]
D RAN89_16610 methylated-DNA--[protein]-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D RAN89_05915 deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D RAN89_09530 FAD-binding domain-containing protein K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D RAN89_00665 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D RAN89_17445 mutY; (GenBank) A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D RAN89_12695 nth; (GenBank) endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D RAN89_13500 S1/P1 nuclease K05986 NUCS; nuclease S1 [EC:3.1.30.1]
D RAN89_07330 NUDIX domain-containing protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D RAN89_15365 dut; (GenBank) dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D RAN89_09545 cryptochrome/photolyase family protein K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13]
D RAN89_11160 alkB; (GenBank) DNA oxidative demethylase AlkB K03919 alkB; DNA oxidative demethylase [EC:1.14.11.33]
D RAN89_04150 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D RAN89_10915 DNA-3-methyladenine glycosylase K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D RAN89_16605 Ada metal-binding domain-containing protein K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D RAN89_08705 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D RAN89_17455 mutM; (GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D RAN89_01760 exodeoxyribonuclease III K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2]
D RAN89_09595 exodeoxyribonuclease III K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2]
D RAN89_16210 recJ; (GenBank) single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D RAN89_12280 ligA; (GenBank) NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D RAN89_09240 polA; (GenBank) DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RAN89_04185 uvrA; (GenBank) excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D RAN89_18345 ATP-binding cassette domain-containing protein K03701 uvrA; excinuclease ABC subunit A
D RAN89_10730 uvrB; (GenBank) excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D RAN89_14055 uvrC; (GenBank) excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D RAN89_09200 3'-5' exonuclease K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RAN89_00605 rpoB; (GenBank) DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D RAN89_00600 rpoC; (GenBank) DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D RAN89_04685 rpoA; (GenBank) DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D RAN89_17335 rpoZ; (GenBank) DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D RAN89_15870 mutS; (GenBank) DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D RAN89_15480 mutL; (GenBank) DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D RAN89_14150 xseA; (GenBank) exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D RAN89_09310 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D RAN89_14425 dnaE; (GenBank) DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RAN89_03165 dnaN; (GenBank) DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RAN89_11855 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D RAN89_04350 holA; (GenBank) DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RAN89_12035 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RAN89_10770 dnaQ; (GenBank) DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RAN89_11580 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RAN89_12955 exonuclease domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RAN89_10140 dnaX; (GenBank) DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RAN89_04195 ssb; (GenBank) single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RAN89_05980 ssb; (GenBank) single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RAN89_13520 Dam family site-specific DNA-(adenine-N6)-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D RAN89_09450 AAA family ATPase K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D RAN89_03745 recA; (GenBank) recombinase RecA K03553 recA; recombination protein RecA
D RAN89_18155 ruvA; (GenBank) Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D RAN89_18140 ruvB; (GenBank) Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D RAN89_05610 ruvC; (GenBank) crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D RAN89_06050 RusA family crossover junction endodeoxyribonuclease K01160 rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]
D RAN89_00540 priA; (GenBank) primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D RAN89_13310 priB; (GenBank) primosomal replication protein N K02686 priB; primosomal replication protein N
D RAN89_01870 radA; (GenBank) DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D RAN89_00960 recG; (GenBank) ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D RAN89_08905 recO; (GenBank) DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D RAN89_10150 recR; (GenBank) recombination mediator RecR K06187 recR; recombination protein RecR
D RAN89_17435 recN; (GenBank) DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D RAN89_02885 recombination-associated protein RdgC K03554 rdgC; recombination associated protein RdgC
D RAN89_05965 rdgC; (GenBank) recombination-associated protein RdgC K03554 rdgC; recombination associated protein RdgC
D RAN89_10120 UvrD-helicase domain-containing protein K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
D RAN89_10115 PD-(D/E)XK nuclease family protein K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
D RAN89_12530 DUF853 family protein K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
D RAN89_03160 gyrB; (GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D RAN89_13510 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D RAN89_14045 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D RAN89_06005 recombinase RecT K07455 recT; recombination protein RecT
D RAN89_05860 Fis family transcriptional regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D RAN89_12980 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D RAN89_09380 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D RAN89_02075 recQ; (GenBank) DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D RAN89_05225 H-NS histone family protein K03746 hns; DNA-binding protein H-NS
D RAN89_13525 H-NS histone family protein K03746 hns; DNA-binding protein H-NS
D RAN89_08600 dinB; (GenBank) DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D RAN89_10490 Y-family DNA polymerase K03502 umuC; DNA polymerase V
D RAN89_10485 umuD; (GenBank) translesion error-prone DNA polymerase V autoproteolytic subunit K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D RAN89_14190 lexA; (GenBank) transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D RAN89_06655 imuA; (GenBank) translesion DNA synthesis-associated protein ImuA K14160 imuA; protein ImuA
D RAN89_06660 DNA polymerase Y family protein K14161 imuB; protein ImuB
D RAN89_06725 error-prone DNA polymerase K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
D RAN89_03750 recX; (GenBank) recombination regulator RecX K03565 recX; regulatory protein
D RAN89_00555 UvrD-helicase domain-containing protein K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4]
D RAN89_14515 dinG; (GenBank) ATP-dependent DNA helicase DinG K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D RAN89_05730 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D RAN89_05725 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:rmk03029]
D RAN89_07280 cytochrome bc complex cytochrome b subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D RAN89_11920 infB; (GenBank) translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D RAN89_13005 infC; (GenBank) translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D RAN89_09835 tsf; (GenBank) translation elongation factor Ts K02357 tsf; elongation factor Ts
D RAN89_00645 tuf; (GenBank) elongation factor Tu K02358 tuf; elongation factor Tu
D RAN89_01590 tuf; (GenBank) elongation factor Tu K02358 tuf; elongation factor Tu
D RAN89_01595 fusA; (GenBank) elongation factor G K02355 fusA; elongation factor G
D RAN89_08900 era; (GenBank) GTPase Era K03595 era; GTPase
D RAN89_18200 tyrS; (GenBank) tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RAN89_04325 leuS; (GenBank) leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RAN89_07700 aspS; (GenBank) aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RAN89_00920 argS; (GenBank) arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RAN89_01740 gatA; (GenBank) Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D RAN89_01745 gatB; (GenBank) Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D RAN89_01735 gatC; (GenBank) Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D RAN89_04195 ssb; (GenBank) single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RAN89_05980 ssb; (GenBank) single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RAN89_14800 dnaK; (GenBank) molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D RAN89_14795 grpE; (GenBank) nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D RAN89_00480 groL; (GenBank) chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RAN89_17775 groL; (GenBank) chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RAN89_00475 co-chaperone GroES K04078 groES; chaperonin GroES
D RAN89_17770 co-chaperone GroES K04078 groES; chaperonin GroES
D RAN89_14805 dnaJ; (GenBank) molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D RAN89_10740 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RAN89_13135 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RAN89_10755 hscB; (GenBank) Fe-S protein assembly co-chaperone HscB K04082 hscB; molecular chaperone HscB
D RAN89_07590 grxD; (GenBank) Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin
D RAN89_07985 apbC; (GenBank) iron-sulfur cluster carrier protein ApbC K03593 mrp; ATP-binding protein involved in chromosome partitioning
D RAN89_06590 cyoE; (GenBank) heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
D RAN89_06555 cytochrome c oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D RAN89_06585 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D RAN89_03190 yidC; (GenBank) membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RAN89_06575 SURF1 family protein K14998 SURF1; surfeit locus 1 family protein
D RAN89_11030 SURF1 family protein K14998 SURF1; surfeit locus 1 family protein
D RAN89_06595 SCO family protein K07152 SCO1; protein SCO1
D RAN89_05005 htpG; (GenBank) molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:rmk02000]
D RAN89_12370 msbA; (GenBank) lipid A export permease/ATP-binding protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D RAN89_05365 ABC transporter ATP-binding protein/permease K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
D RAN89_07795 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D RAN89_15610 ABC transporter transmembrane domain-containing protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D RAN89_04230 type I secretion system permease/ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D RAN89_00255 type I secretion system permease/ATPase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D RAN89_17925 ABC transporter ATP-binding protein/permease K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein
D RAN89_02225 ATP-binding cassette domain-containing protein K15738 uup; ABC transport system ATP-binding/permease protein
D RAN89_02620 sulfate ABC transporter substrate-binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D RAN89_02435 sulfate ABC transporter substrate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D RAN89_02625 cysT; (GenBank) sulfate ABC transporter permease subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D RAN89_02630 cysW; (GenBank) sulfate ABC transporter permease subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D RAN89_02635 sulfate ABC transporter ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D RAN89_04780 substrate-binding domain-containing protein K02020 modA; molybdate transport system substrate-binding protein
D RAN89_14345 modA; (GenBank) molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D RAN89_14340 modB; (GenBank) molybdate ABC transporter permease subunit K02018 modB; molybdate transport system permease protein
D RAN89_14335 modC; (GenBank) molybdenum ABC transporter ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D RAN89_08030 extracellular solute-binding protein K05772 tupA; tungstate transport system substrate-binding protein
D RAN89_08020 ABC transporter permease K05773 tupB; tungstate transport system permease protein
D RAN89_08025 ATP-binding cassette domain-containing protein K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6]
D RAN89_03030 CmpA/NrtA family ABC transporter substrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D RAN89_15765 CmpA/NrtA family ABC transporter substrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D RAN89_03035 ntrB; (GenBank) nitrate ABC transporter permease K15577 nrtB; nitrate/nitrite transport system permease protein
D RAN89_15770 ntrB; (GenBank) nitrate ABC transporter permease K15577 nrtB; nitrate/nitrite transport system permease protein
D RAN89_03040 ABC transporter ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D RAN89_15775 ABC transporter ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D RAN89_04095 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D RAN89_16795 extracellular solute-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D RAN89_18090 iron ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D RAN89_04090 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D RAN89_16800 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D RAN89_18085 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D RAN89_04085 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D RAN89_04100 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D RAN89_15535 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D RAN89_16805 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D RAN89_18080 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D RAN89_15545 thiamine ABC transporter substrate-binding protein K02064 thiB; thiamine transport system substrate-binding protein
D RAN89_15540 iron ABC transporter permease K02063 thiP; thiamine transport system permease protein
D RAN89_13040 extracellular solute-binding protein K11073 potF; putrescine transport system substrate-binding protein
D RAN89_13025 ABC transporter permease subunit K11074 potI; putrescine transport system permease protein
D RAN89_13030 ABC transporter permease K11075 potH; putrescine transport system permease protein
D RAN89_13035 potA; (GenBank) polyamine ABC transporter ATP-binding protein K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16]
D RAN89_02850 extracellular solute-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D RAN89_14615 ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D RAN89_02860 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D RAN89_14625 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D RAN89_02855 ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D RAN89_14620 ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D RAN89_02845 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D RAN89_14610 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D RAN89_13215 ABC transporter substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D RAN89_13220 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein
D RAN89_13230 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein
D RAN89_13225 ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D RAN89_17535 ABC transporter substrate-binding protein K05777 ynjB; putative thiamine transport system substrate-binding protein
D RAN89_17645 ABC transporter permease K05778 ynjC; putative thiamine transport system permease protein
D RAN89_17655 ATP-binding cassette domain-containing protein K05779 ynjD; putative thiamine transport system ATP-binding protein
D RAN89_02330 ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D RAN89_02645 ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D RAN89_17115 ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D RAN89_02460 ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D RAN89_02650 ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D RAN89_02655 ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D RAN89_17125 ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D RAN89_02465 ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D RAN89_02660 ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D RAN89_17120 ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D RAN89_01325 ATP-binding cassette domain-containing protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D RAN89_02415 ABC transporter ATP-binding protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D RAN89_03670 ugpC; (GenBank) sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D RAN89_18045 ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D RAN89_03655 ABC transporter substrate-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D RAN89_03660 sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D RAN89_03665 carbohydrate ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D RAN89_01320 ABC transporter substrate-binding protein K10232 aglE; alpha-glucoside transport system substrate-binding protein
D RAN89_01315 sugar ABC transporter permease K10233 aglF; alpha-glucoside transport system permease protein
D RAN89_01310 carbohydrate ABC transporter permease K10234 aglG; alpha-glucoside transport system permease protein
D RAN89_03650 ABC transporter substrate-binding protein K17315 gtsA; glucose/mannose transport system substrate-binding protein
D RAN89_18060 ABC transporter substrate-binding protein K17315 gtsA; glucose/mannose transport system substrate-binding protein
D RAN89_18065 ABC transporter substrate-binding protein K17315 gtsA; glucose/mannose transport system substrate-binding protein
D RAN89_18055 sugar ABC transporter permease K17316 gtsB; glucose/mannose transport system permease protein
D RAN89_18050 carbohydrate ABC transporter permease K17317 gtsC; glucose/mannose transport system permease protein
D RAN89_03120 extracellular solute-binding protein K10188 lacE; lactose/L-arabinose transport system substrate-binding protein
D RAN89_03115 sugar ABC transporter permease K10189 lacF; lactose/L-arabinose transport system permease protein
D RAN89_03110 carbohydrate ABC transporter permease K10190 lacG; lactose/L-arabinose transport system permease protein
D RAN89_03100 ugpC; (GenBank) sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10191 lacK; lactose/L-arabinose transport system ATP-binding protein
D RAN89_12730 substrate-binding domain-containing protein K10543 xylF; D-xylose transport system substrate-binding protein
D RAN89_12725 ABC transporter permease K10544 xylH; D-xylose transport system permease protein
D RAN89_12720 ATP-binding cassette domain-containing protein K10545 xylG; D-xylose transport system ATP-binding protein [EC:7.5.2.10]
D RAN89_02970 chvE; (GenBank) sugar ABC transporter substrate-binding protein K10546 chvE; putative multiple sugar transport system substrate-binding protein
D RAN89_03000 chvE; (GenBank) sugar ABC transporter substrate-binding protein K10546 chvE; putative multiple sugar transport system substrate-binding protein
D RAN89_02980 gguB; (GenBank) sugar ABC transporter permease K10547 gguB; putative multiple sugar transport system permease protein
D RAN89_02975 gguA; (GenBank) sugar ABC transporter ATP-binding protein K10548 gguA; putative multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D RAN89_01805 substrate-binding domain-containing protein K10552 frcB; fructose transport system substrate-binding protein
D RAN89_01800 ABC transporter permease K10553 frcC; fructose transport system permease protein
D RAN89_01795 ATP-binding cassette domain-containing protein K10554 frcA; fructose transport system ATP-binding protein
D RAN89_03960 rhaS; (GenBank) rhamnose ABC transporter substrate-binding protein K10559 rhaS; rhamnose transport system substrate-binding protein
D RAN89_03970 ABC transporter permease K10560 rhaP; rhamnose transport system permease protein
D RAN89_03975 ABC transporter permease K10561 rhaQ; rhamnose transport system permease protein
D RAN89_03965 sugar ABC transporter ATP-binding protein K10562 rhaT; rhamnose transport system ATP-binding protein [EC:7.5.2.-]
D RAN89_11615 ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D RAN89_11610 ABC transporter permease K10440 rbsC; ribose transport system permease protein
D RAN89_11605 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D RAN89_02155 ABC transporter substrate-binding protein K23508 ytfQ; galactofuranose transport system substrate-binding protein
D RAN89_02140 yjfF; (GenBank) galactofuranose ABC transporter, permease protein YjfF K23509 ytfT; galactofuranose transport system permease protein
D RAN89_02145 ABC transporter permease K23509 ytfT; galactofuranose transport system permease protein
D RAN89_02150 sugar ABC transporter ATP-binding protein K10820 ytfR; galactofuranose transport system ATP-binding protein [EC:7.5.2.9]
D RAN89_07655 ugpB; (GenBank) sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D RAN89_07650 ugpA; (GenBank) sn-glycerol-3-phosphate ABC transporter permease UgpA K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D RAN89_07645 ugpE; (GenBank) sn-glycerol-3-phosphate ABC transporter permease UgpE K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D RAN89_07640 ugpC; (GenBank) sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D RAN89_02430 sugar ABC transporter substrate-binding protein K10227 smoE; polyol transport system substrate-binding protein
D RAN89_10975 sugar ABC transporter substrate-binding protein K10227 smoE; polyol transport system substrate-binding protein
D RAN89_02425 sugar ABC transporter permease K10228 smoF; polyol transport system permease protein
D RAN89_02420 carbohydrate ABC transporter permease K10229 smoG; polyol transport system permease protein
D RAN89_11765 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D RAN89_16955 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D RAN89_11775 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D RAN89_16965 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D RAN89_11780 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D RAN89_16960 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D RAN89_11770 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D RAN89_16970 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D RAN89_01680 MlaD family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D RAN89_07120 mlaD; (GenBank) outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D RAN89_01690 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D RAN89_07115 mlaE; (GenBank) lipid asymmetry maintenance ABC transporter permease subunit MlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D RAN89_01685 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D RAN89_07110 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D RAN89_01675 ABC-type transport auxiliary lipoprotein family protein K18480 linN; cholesterol transport system auxiliary component
D RAN89_07130 ABC transporter substrate-binding protein K07323 mlaC; phospholipid transport system substrate-binding protein
D RAN89_07135 STAS domain-containing protein K07122 mlaB; phospholipid transport system transporter-binding protein
D RAN89_08605 extracellular solute-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D RAN89_10060 pstS; (GenBank) phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D RAN89_10065 pstC; (GenBank) phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D RAN89_10070 pstA; (GenBank) phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D RAN89_10075 pstB; (GenBank) phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D RAN89_16575 phnD; (GenBank) phosphonate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D RAN89_16570 phnC; (GenBank) phosphonate ABC transporter ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D RAN89_04525 transporter substrate-binding domain-containing protein K10013 argT; lysine/arginine/ornithine transport system substrate-binding protein
D RAN89_16300 amino acid ABC transporter substrate-binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein
D RAN89_16305 ABC transporter permease subunit K09970 aapQ; general L-amino acid transport system permease protein
D RAN89_16310 amino acid ABC transporter permease K09971 aapM; general L-amino acid transport system permease protein
D RAN89_16315 amino acid ABC transporter ATP-binding protein K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1]
D RAN89_11485 ABC transporter substrate-binding protein K10022 aotJ; arginine/ornithine transport system substrate-binding protein
D RAN89_11475 ABC transporter permease subunit K10023 aotM; arginine/ornithine transport system permease protein
D RAN89_11480 ABC transporter permease K10024 aotQ; arginine/ornithine transport system permease protein
D RAN89_11465 ATP-binding cassette domain-containing protein K10025 aotP; arginine/ornithine transport system ATP-binding protein [EC:7.4.2.1]
D RAN89_04725 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RAN89_04795 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RAN89_04900 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RAN89_05070 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RAN89_05330 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RAN89_10540 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RAN89_14695 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RAN89_15935 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RAN89_15945 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RAN89_16190 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RAN89_04730 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D RAN89_04895 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D RAN89_05060 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D RAN89_05355 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D RAN89_08480 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D RAN89_10535 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D RAN89_14700 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D RAN89_04735 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D RAN89_04890 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D RAN89_05065 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D RAN89_05350 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D RAN89_08485 ABC transporter ATP-binding protein K01998 livM; branched-chain amino acid transport system permease protein
D RAN89_10530 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D RAN89_14705 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D RAN89_04740 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RAN89_04885 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RAN89_05055 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RAN89_05345 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RAN89_08490 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RAN89_10525 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RAN89_14710 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RAN89_04745 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RAN89_04880 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RAN89_05075 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RAN89_05340 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RAN89_08495 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RAN89_10520 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RAN89_14715 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RAN89_17165 urtA; (GenBank) urea ABC transporter substrate-binding protein K11959 urtA; urea transport system substrate-binding protein
D RAN89_17160 urtB; (GenBank) urea ABC transporter permease subunit UrtB K11960 urtB; urea transport system permease protein
D RAN89_17155 urtC; (GenBank) urea ABC transporter permease subunit UrtC K11961 urtC; urea transport system permease protein
D RAN89_17150 urtD; (GenBank) urea ABC transporter ATP-binding protein UrtD K11962 urtD; urea transport system ATP-binding protein
D RAN89_17145 urtE; (GenBank) urea ABC transporter ATP-binding subunit UrtE K11963 urtE; urea transport system ATP-binding protein
D RAN89_04530 ABC transporter permease subunit K23056 K23056; putative lysine/arginine/ornithine/histidine/octopine transport system permease protein
D RAN89_04535 ABC transporter permease subunit K23057 K23057; putative lysine/arginine/ornithine/histidine/octopine transport system permease protein
D RAN89_00815 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D RAN89_00845 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D RAN89_00955 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D RAN89_08750 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D RAN89_09635 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D RAN89_12110 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D RAN89_13460 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D RAN89_13685 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D RAN89_14765 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D RAN89_15250 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D RAN89_15520 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D RAN89_00820 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D RAN89_00825 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D RAN89_00830 amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D RAN89_13105 ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein
D RAN89_13085 ABC transporter permease subunit K12369 dppB; dipeptide transport system permease protein
D RAN89_13090 ABC transporter permease subunit K12370 dppC; dipeptide transport system permease protein
D RAN89_13095 ABC transporter ATP-binding protein K12371 dppD; dipeptide transport system ATP-binding protein
D RAN89_13100 peptide ABC transporter ATP-binding protein K12372 dppF; dipeptide transport system ATP-binding protein
D RAN89_11890 extracellular solute-binding protein K13893 yejA; microcin C transport system substrate-binding protein
D RAN89_11895 ABC transporter permease subunit K13894 yejB; microcin C transport system permease protein
D RAN89_11900 ABC transporter permease K13895 yejE; microcin C transport system permease protein
D RAN89_11905 dipeptide ABC transporter ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein
D RAN89_12855 ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D RAN89_12880 ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D RAN89_12850 iron ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein
D RAN89_12860 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D RAN89_06850 biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component
D RAN89_18390 biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component
D RAN89_18385 energy-coupling factor transporter transmembrane protein EcfT K16783 bioN; biotin transport system permease protein
D RAN89_18380 ABC transporter ATP-binding protein K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-]
D RAN89_16470 metal ABC transporter substrate-binding protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein
D RAN89_16465 metal ABC transporter permease K02075 ABC.ZM.P; zinc/manganese transport system permease protein
D RAN89_16460 aztA; (GenBank) zinc ABC transporter ATP-binding protein AztA K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein
D RAN89_11845 lptF; (GenBank) LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein
D RAN89_11840 lptG; (GenBank) LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein
D RAN89_00895 lptB; (GenBank) LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D RAN89_04490 ABC transporter permease K09694 nodJ; lipooligosaccharide transport system permease protein
D RAN89_04495 ATP-binding cassette domain-containing protein K09695 nodI; lipooligosaccharide transport system ATP-binding protein
D RAN89_16200 lipoprotein-releasing ABC transporter permease subunit K09808 lolC_E_F; lipoprotein-releasing system permease protein
D RAN89_16195 lolD; (GenBank) lipoprotein-releasing ABC transporter ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D RAN89_17200 ATP-binding cassette domain-containing protein K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D RAN89_07145 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D RAN89_03695 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RAN89_07140 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RAN89_08065 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein
D RAN89_15550 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein
D RAN89_15900 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D RAN89_16440 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D RAN89_11350 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D RAN89_15515 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D RAN89_15905 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D RAN89_16445 ATP-binding cassette domain-containing protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D RAN89_08255 bile acid:sodium symporter family protein K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D RAN89_15505 MATE family efflux transporter K26939 norM; MATE family, multidrug efflux pump
D RAN89_01300 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D RAN89_09690 MFS transporter K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter
D RAN89_01890 lplT; (GenBank) lysophospholipid transporter LplT K08227 lplT; MFS transporter, LPLT family, lysophospholipid transporter
D RAN89_06470 lplT; (GenBank) lysophospholipid transporter LplT K08227 lplT; MFS transporter, LPLT family, lysophospholipid transporter
D RAN89_01770 AmpG family muropeptide MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D RAN89_03380 multidrug effflux MFS transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D RAN89_06635 multidrug effflux MFS transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D RAN89_16925 MFS transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D RAN89_14655 DHA2 family efflux MFS transporter permease subunit K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D RAN89_01490 ptsP; (GenBank) phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D RAN89_01495 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D RAN89_01500 PTS fructose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D RAN89_04290 PTS sugar transporter subunit IIA K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D RAN89_04465 potassium channel family protein K10716 kch; voltage-gated potassium channel
D RAN89_00495 ammonium transporter K03320 amt; ammonium transporter, Amt family
D RAN89_01940 amt; (GenBank) ammonium transporter K03320 amt; ammonium transporter, Amt family
D RAN89_03270 ammonium transporter K03320 amt; ammonium transporter, Amt family
D RAN89_00440 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RAN89_02800 gstA; (GenBank) glutathione transferase GstA K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RAN89_09675 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RAN89_15265 MAPEG family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RAN89_16010 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RAN89_18020 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RAN89_07290 glutathione S-transferase N-terminal domain-containing protein K03599 sspA; stringent starvation protein A
D RAN89_13420 Bax inhibitor-1/YccA family protein K19416 yccA; modulator of FtsH protease
D RAN89_07270 mscL; (GenBank) large conductance mechanosensitive channel protein MscL K03282 mscL; large conductance mechanosensitive channel
D RAN89_08470 mechanosensitive ion channel family protein K03442 mscS; small conductance mechanosensitive channel
D RAN89_00295 motA; (GenBank) flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D RAN89_00300 motB; (GenBank) flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D RAN89_04315 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D RAN89_13400 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D RAN89_14155 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D RAN89_04320 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD
D RAN89_13405 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD
D RAN89_14160 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD
D RAN89_14400 tolQ; (GenBank) protein TolQ K03562 tolQ; biopolymer transport protein TolQ
D RAN89_14405 biopolymer transporter ExbD K03560 tolR; biopolymer transport protein TolR
D RAN89_04275 magnesium and cobalt transport protein CorA K03284 corA; magnesium transporter
D RAN89_16220 transporter K16074 zntB; zinc transporter
D RAN89_09350 crcB; (GenBank) fluoride efflux transporter CrcB K06199 crcB; fluoride exporter
D RAN89_16900 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D RAN89_00860 outer membrane beta-barrel protein K16079 omp31; outer membrane immunogenic protein
D RAN89_09415 OmpA family protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D RAN89_15195 outer membrane beta-barrel protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D RAN89_13385 TonB-dependent siderophore receptor K16090 fiu; catecholate siderophore receptor
D RAN89_00245 TolC family outer membrane protein K12538 hasF; outer membrane protein, type I secretion system
D RAN89_16510 TolC family outer membrane protein K12340 tolC; outer membrane protein
D RAN89_04200 TolC family outer membrane protein K12543 lapE; outer membrane protein, adhesin transport system
D RAN89_14645 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D RAN89_15295 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D RAN89_09270 efflux transporter outer membrane subunit K18904 nodT; outer membrane protein, multidrug efflux system
D RAN89_07490 epsE; (GenBank) polysaccharide export protein EpsE K01991 wza; polysaccharide biosynthesis/export protein
D RAN89_11280 bamB; (GenBank) outer membrane protein assembly factor BamB K17713 bamB; outer membrane protein assembly factor BamB
D RAN89_15345 bamC; (GenBank) outer membrane protein assembly factor BamC K07287 bamC; outer membrane protein assembly factor BamC
D RAN89_11225 outer membrane protein assembly factor BamD K05807 bamD; outer membrane protein assembly factor BamD
D RAN89_04305 outer membrane protein assembly factor BamE K06186 bamE; outer membrane protein assembly factor BamE
D RAN89_00900 lptA; (GenBank) lipopolysaccharide transport periplasmic protein LptA K09774 lptA; lipopolysaccharide export system protein LptA
D RAN89_03225 lptC; (GenBank) LPS export ABC transporter periplasmic protein LptC K11719 lptC; lipopolysaccharide export system protein LptC
D RAN89_03320 lptD; (GenBank) LPS assembly protein LptD K04744 lptD; LPS-assembly protein
D RAN89_04330 lptE; (GenBank) LPS assembly lipoprotein LptE K03643 lptE; LPS-assembly lipoprotein
D RAN89_02615 MipA/OmpV family protein K07274 mipA; MipA family protein
D RAN89_18570 transporter associated domain-containing protein K06189 corC; hemolysin (HlyC) family protein
D RAN89_01135 CidA/LrgA family protein K06518 cidA; holin-like protein
D RAN89_05430 eat; (GenBank) ethanolamine permease K16238 eat; ethanolamine permease
D RAN89_09255 ZIP family metal transporter K16267 zipB; zinc and cadmium transporter
D RAN89_14275 efflux RND transporter permease subunit K18303 mexK; multidrug efflux pump
D RAN89_09280 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D RAN89_15290 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D RAN89_16495 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D RAN89_02380 efflux RND transporter permease subunit K07788 mdtB; multidrug efflux pump
D RAN89_06625 EamA family transporter K15268 eamA; O-acetylserine/cysteine efflux transporter
D RAN89_17560 EamA family transporter K11939 rhtA; inner membrane transporter RhtA
D RAN89_03450 rarD; (GenBank) EamA family transporter RarD K05786 rarD; chloramphenicol-sensitive protein RarD
D RAN89_02815 YnfA family protein K09771 TC.SMR3; small multidrug resistance family-3 protein
D RAN89_06665 L-lactate permease K03303 lutP; lactate permease
D RAN89_09705 ionic transporter y4hA K07300 chaA; Ca2+:H+ antiporter
D RAN89_13320 VC_2705 family sodium/solute symporter K14393 actP; cation/acetate symporter
D RAN89_06915 dicarboxylate/amino acid:cation symporter K11103 dctA; aerobic C4-dicarboxylate transport protein
D RAN89_06500 kefC; (GenBank) glutathione-regulated potassium-efflux system protein KefC K11745 kefC; glutathione-regulated potassium-efflux system protein KefC
D RAN89_06505 NAD(P)H-dependent oxidoreductase K11746 kefF; glutathione-regulated potassium-efflux system ancillary protein KefF
D RAN89_03210 monovalent cation:proton antiporter-2 (CPA2) family protein K03455 KEA1_2_3; K+:H+ antiporter
D RAN89_17110 nucleobase:cation symporter-2 family protein K24206 uacT; uric acid transporter
D RAN89_04380 benzoate/H(+) symporter BenE family transporter K05782 benE; benzoate membrane transport protein
D RAN89_07860 chrA; (GenBank) chromate efflux transporter K07240 chrA; chromate transporter
D RAN89_11380 chromate transporter K07240 chrA; chromate transporter
D RAN89_11385 chromate transporter K07240 chrA; chromate transporter
D RAN89_07930 SulP family inorganic anion transporter K03321 TC.SULP; sulfate permease, SulP family
D RAN89_02675 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D RAN89_06945 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D RAN89_08585 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D RAN89_09325 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D RAN89_11115 sialic acid TRAP transporter substrate-binding protein SiaP K11688 dctP; TRAP-type transport system periplasmic protein
D RAN89_14580 sialic acid TRAP transporter substrate-binding protein SiaP K11688 dctP; TRAP-type transport system periplasmic protein
D RAN89_15555 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D RAN89_17025 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D RAN89_17060 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D RAN89_06935 TRAP transporter small permease K11689 dctQ; TRAP-type transport system small permease protein
D RAN89_09340 TRAP transporter small permease subunit K11689 dctQ; TRAP-type transport system small permease protein
D RAN89_11110 TRAP transporter small permease K11689 dctQ; TRAP-type transport system small permease protein
D RAN89_14585 TRAP transporter small permease subunit K11689 dctQ; TRAP-type transport system small permease protein
D RAN89_15565 TRAP transporter small permease subunit K11689 dctQ; TRAP-type transport system small permease protein
D RAN89_17030 TRAP transporter small permease K11689 dctQ; TRAP-type transport system small permease protein
D RAN89_06940 TRAP transporter large permease subunit K11690 dctM; TRAP-type transport system large permease protein
D RAN89_09335 TRAP transporter large permease subunit K11690 dctM; TRAP-type transport system large permease protein
D RAN89_11105 TRAP transporter large permease K11690 dctM; TRAP-type transport system large permease protein
D RAN89_14590 TRAP transporter large permease K11690 dctM; TRAP-type transport system large permease protein
D RAN89_15560 TRAP transporter large permease subunit K11690 dctM; TRAP-type transport system large permease protein
D RAN89_17035 TRAP transporter large permease K11690 dctM; TRAP-type transport system large permease protein
D RAN89_08330 Na/Pi cotransporter family protein K03324 yjbB; phosphate:Na+ symporter
D RAN89_09975 arsA; (GenBank) arsenical pump-driving ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D RAN89_14995 murJ; (GenBank) murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D RAN89_00550 AEC family transporter K13936 mdcF; malonate transporter and related proteins
D RAN89_04760 AEC family transporter K13936 mdcF; malonate transporter and related proteins
D RAN89_15430 AEC family transporter K13936 mdcF; malonate transporter and related proteins
D RAN89_16425 AEC family transporter K13936 mdcF; malonate transporter and related proteins
D RAN89_04375 potassium transporter Kup K03549 kup; KUP system potassium uptake protein
D RAN89_11560 potassium transporter Kup K03549 kup; KUP system potassium uptake protein
D RAN89_15260 LysE family transporter K06895 lysE; L-lysine exporter family protein LysE/ArgO
D RAN89_05410 LysE family transporter K05834 rhtB; homoserine/homoserine lactone efflux protein
D RAN89_14325 LysE family translocator K05834 rhtB; homoserine/homoserine lactone efflux protein
D RAN89_00455 LysE family translocator K05835 rhtC; threonine efflux protein
D RAN89_02770 LysE family translocator K11250 leuE; leucine efflux protein
D RAN89_09915 leuE; (GenBank) leucine efflux protein LeuE K11250 leuE; leucine efflux protein
D RAN89_04050 AzlC family ABC transporter permease K26605 azlC; branched chain amino acid efflux pump
D RAN89_04055 AzlD domain-containing protein K26606 azlD; branched chain amino acid efflux pump
D RAN89_02685 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D RAN89_07885 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D RAN89_10500 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D RAN89_14350 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D RAN89_16165 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D RAN89_02680 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein
D RAN89_07890 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein
D RAN89_10505 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein
D RAN89_14355 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein
D RAN89_16170 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein
D RAN89_05400 tripartite tricarboxylate transporter substrate-binding protein K07795 tctC; putative tricarboxylic transport membrane protein
D RAN89_11415 tripartite tricarboxylate transporter substrate-binding protein K07795 tctC; putative tricarboxylic transport membrane protein
D RAN89_14360 tripartite tricarboxylate transporter substrate-binding protein K07795 tctC; putative tricarboxylic transport membrane protein
D RAN89_05560 ftsW; (GenBank) putative lipid II flippase FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D RAN89_09285 TMEM165/GDT1 family protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D RAN89_05630 TonB family protein K03832 tonB; periplasmic protein TonB
D RAN89_13395 energy transducer TonB K03832 tonB; periplasmic protein TonB
D RAN89_17080 hypothetical protein K03832 tonB; periplasmic protein TonB
D RAN89_12350 pal; (GenBank) peptidoglycan-associated lipoprotein Pal K03640 pal; peptidoglycan-associated lipoprotein
D RAN89_14410 tolA; (GenBank) cell envelope integrity protein TolA K03646 tolA; colicin import membrane protein
D RAN89_12355 tolB; (GenBank) Tol-Pal system beta propeller repeat protein TolB K03641 tolB; TolB protein
D RAN89_10205 sodium-translocating pyrophosphatase K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1]
D RAN89_14650 HlyD family efflux transporter periplasmic adaptor subunit K03543 emrA; membrane fusion protein, multidrug efflux system
D RAN89_00250 HlyD family type I secretion periplasmic adaptor subunit K12537 hasE; membrane fusion protein, type I secretion system
D RAN89_04225 HlyD family type I secretion periplasmic adaptor subunit K12542 lapC; membrane fusion protein, adhesin transport system
D RAN89_14280 efflux RND transporter periplasmic adaptor subunit K18302 mexJ; membrane fusion protein, multidrug efflux system
D RAN89_09275 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D RAN89_15285 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D RAN89_16490 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D RAN89_02385 efflux RND transporter periplasmic adaptor subunit K07799 mdtA; membrane fusion protein, multidrug efflux system
D RAN89_07480 epsG; (GenBank) chain length determinant protein tyrosine kinase EpsG K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D RAN89_07485 epsF; (GenBank) chain length determinant protein EpsF K25590 epsF; protein tyrosine kinase modulator
D RAN89_01255 BON domain-containing protein K28369 dolP; outer membrane lipoprotein DolP
D RAN89_14420 FeoA family protein K04758 feoA; ferrous iron transport protein A
D RAN89_14415 ferrous iron transporter B K04759 feoB; ferrous iron transport protein B
D RAN89_09045 entericidin A/B family lipoprotein K16348 ecnB; entericidin B
D RAN89_17085 uraH; (GenBank) hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
C 02044 Secretion system [BR:rmk02044]
D RAN89_16510 TolC family outer membrane protein K12340 tolC; outer membrane protein
D RAN89_00255 type I secretion system permease/ATPase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D RAN89_00250 HlyD family type I secretion periplasmic adaptor subunit K12537 hasE; membrane fusion protein, type I secretion system
D RAN89_00245 TolC family outer membrane protein K12538 hasF; outer membrane protein, type I secretion system
D RAN89_04230 type I secretion system permease/ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D RAN89_04225 HlyD family type I secretion periplasmic adaptor subunit K12542 lapC; membrane fusion protein, adhesin transport system
D RAN89_04200 TolC family outer membrane protein K12543 lapE; outer membrane protein, adhesin transport system
D RAN89_17845 type II secretion system protein N K02452 gspC; general secretion pathway protein C
D RAN89_17885 gspD; (GenBank) type II secretion system secretin GspD K02453 gspD; general secretion pathway protein D
D RAN89_16175 ATPase, T2SS/T4P/T4SS family K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D RAN89_17890 ATPase, T2SS/T4P/T4SS family K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D RAN89_17905 gspF; (GenBank) type II secretion system inner membrane protein GspF K02455 gspF; general secretion pathway protein F
D RAN89_17850 gspG; (GenBank) type II secretion system major pseudopilin GspG K02456 gspG; general secretion pathway protein G
D RAN89_17855 prepilin-type N-terminal cleavage/methylation domain-containing protein K02457 gspH; general secretion pathway protein H
D RAN89_17860 gspI; (GenBank) type II secretion system minor pseudopilin GspI K02458 gspI; general secretion pathway protein I
D RAN89_17865 gspK; (GenBank) type II secretion system minor pseudopilin GspK K02460 gspK; general secretion pathway protein K
D RAN89_17870 gspL; (GenBank) type II secretion system protein GspL K02461 gspL; general secretion pathway protein L
D RAN89_17875 gspM; (GenBank) type II secretion system protein GspM K02462 gspM; general secretion pathway protein M
D RAN89_17880 gspN; (GenBank) type II secretion system protein N K02463 gspN; general secretion pathway protein N
D RAN89_07350 A24 family peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D RAN89_03805 pilin K02650 pilA; type IV pilus assembly protein PilA
D RAN89_07360 pilB; (GenBank) type IV-A pilus assembly ATPase PilB K02652 pilB; type IV pilus assembly protein PilB
D RAN89_07355 type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC
D RAN89_10830 type IV pilin protein K02655 pilE; type IV pilus assembly protein PilE
D RAN89_11255 pilW; (GenBank) type IV pilus biogenesis/stability protein PilW K02656 pilF; type IV pilus assembly protein PilF
D RAN89_05890 response regulator K02657 pilG; twitching motility two-component system response regulator PilG
D RAN89_05895 response regulator K02658 pilH; twitching motility two-component system response regulator PilH
D RAN89_05900 chemotaxis protein CheW K02659 pilI; twitching motility protein PilI
D RAN89_05905 methyl-accepting chemotaxis protein K02660 pilJ; twitching motility protein PilJ
D RAN89_07035 pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
D RAN89_07040 PilN domain-containing protein K02663 pilN; type IV pilus assembly protein PilN
D RAN89_07045 type 4a pilus biogenesis protein PilO K02664 pilO; type IV pilus assembly protein PilO
D RAN89_07050 pilus assembly protein PilP K02665 pilP; type IV pilus assembly protein PilP
D RAN89_07055 type IV pilus secretin PilQ K02666 pilQ; type IV pilus assembly protein PilQ
D RAN89_01240 type IV pilus twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D RAN89_01245 PilT/PilU family type 4a pilus ATPase K02670 pilU; twitching motility protein PilU
D RAN89_12310 PilT/PilU family type 4a pilus ATPase K02670 pilU; twitching motility protein PilU
D RAN89_10850 pilV; (GenBank) type IV pilus modification protein PilV K02671 pilV; type IV pilus assembly protein PilV
D RAN89_10845 PilW family protein K02672 pilW; type IV pilus assembly protein PilW
D RAN89_10840 pilus assembly protein PilX K02673 pilX; type IV pilus assembly protein PilX
D RAN89_10835 PilC/PilY family type IV pilus protein K02674 pilY1; type IV pilus assembly protein PilY1
D RAN89_12030 pilus assembly protein PilZ K02676 pilZ; type IV pilus assembly protein PilZ
D RAN89_10855 GspH/FimT family protein K08084 fimT; type IV fimbrial biogenesis protein FimT
D RAN89_09025 FimV/HubP family polar landmark protein K08086 fimV; pilus assembly protein FimV
D RAN89_02025 prepilin-type N-terminal cleavage/methylation domain-containing protein K10924 mshA; MSHA pilin protein MshA
D RAN89_07385 type II secretion system protein K10924 mshA; MSHA pilin protein MshA
D RAN89_16285 prepilin-type N-terminal cleavage/methylation domain-containing protein K10924 mshA; MSHA pilin protein MshA
D RAN89_02010 prepilin-type N-terminal cleavage/methylation domain-containing protein K10926 mshC; MSHA pilin protein MshC
D RAN89_02005 type II secretion system protein K10927 mshD; MSHA pilin protein MshD
D RAN89_02040 GspE/PulE family protein K12276 mshE; MSHA biogenesis protein MshE
D RAN89_02035 type II secretion system F family protein K12278 mshG; MSHA biogenesis protein MshG
D RAN89_01980 PilN domain-containing protein K12279 mshI; MSHA biogenesis protein MshI
D RAN89_01985 hypothetical protein K12279 mshI; MSHA biogenesis protein MshI
D RAN89_01975 hypothetical protein K12280 mshJ; MSHA biogenesis protein MshJ
D RAN89_01970 hypothetical protein K12281 mshK; MSHA biogenesis protein MshK
D RAN89_01965 secretin N-terminal domain-containing protein K12282 mshL; MSHA biogenesis protein MshL
D RAN89_01960 AAA family ATPase K12283 mshM; MSHA biogenesis protein MshM
D RAN89_01955 hypothetical protein K12284 mshN; MSHA biogenesis protein MshN
D RAN89_02000 prepilin-type N-terminal cleavage/methylation domain-containing protein K12285 mshO; MSHA biogenesis protein MshO
D RAN89_01995 hypothetical protein K12286 mshP; MSHA biogenesis protein MshP
D RAN89_01990 hypothetical protein K12287 mshQ; MSHA biogenesis protein MshQ
D RAN89_08990 YggT family protein K02221 yggT; YggT family protein
D RAN89_09355 helix-hairpin-helix domain-containing protein K02237 comEA; competence protein ComEA
D RAN89_16920 dCMP deaminase family protein K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D RAN89_14905 DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC
D RAN89_00315 EscU/YscU/HrcU family type III secretion system export apparatus switch protein K02401 flhB; flagellar biosynthesis protein FlhB
D RAN89_00210 fliF; (GenBank) flagellar basal-body MS-ring/collar protein FliF K02409 fliF; flagellar M-ring protein FliF
D RAN89_00200 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D RAN89_00195 fliI; (GenBank) flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D RAN89_00170 fliN; (GenBank) flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D RAN89_00165 flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D RAN89_00160 fliP; (GenBank) flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D RAN89_00155 fliQ; (GenBank) flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D RAN89_00150 fliR; (GenBank) flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D RAN89_05810 DsbC family protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D RAN89_07315 secA; (GenBank) preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RAN89_07775 secB; (GenBank) protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D RAN89_04010 secD; (GenBank) protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D RAN89_00635 secE; (GenBank) preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D RAN89_04015 secF; (GenBank) protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D RAN89_15720 secG; (GenBank) preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D RAN89_04660 secY; (GenBank) preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D RAN89_05760 ffh; (GenBank) signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D RAN89_17530 ftsY; (GenBank) signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D RAN89_04005 yajC; (GenBank) preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D RAN89_03190 yidC; (GenBank) membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RAN89_07235 tatA; (GenBank) Sec-independent protein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA
D RAN89_07240 tatB; (GenBank) Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D RAN89_07245 tatC; (GenBank) twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:rmk02042]
D RAN89_16900 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
C 02022 Two-component system [BR:rmk02022]
D RAN89_10090 phoR; (GenBank) phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D RAN89_10085 phoB; (GenBank) phosphate regulon transcriptional regulator PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D RAN89_12645 ATP-binding protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D RAN89_12640 ompR; (GenBank) two-component system response regulator OmpR K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D RAN89_01840 ATP-binding protein K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D RAN89_04105 HAMP domain-containing sensor histidine kinase K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D RAN89_01845 response regulator transcription factor K07666 qseB; two-component system, OmpR family, response regulator QseB
D RAN89_11550 DUF4118 domain-containing protein K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D RAN89_11555 response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D RAN89_05245 ATP-binding protein K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D RAN89_11420 sensor histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D RAN89_14370 sensor histidine kinase N-terminal domain-containing protein K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D RAN89_04110 response regulator K07774 tctD; two-component system, OmpR family, response regulator TctD
D RAN89_11425 response regulator K07774 tctD; two-component system, OmpR family, response regulator TctD
D RAN89_14365 response regulator transcription factor K07774 tctD; two-component system, OmpR family, response regulator TctD
D RAN89_16880 HAMP domain-containing sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D RAN89_03645 response regulator K02483 K02483; two-component system, OmpR family, response regulator
D RAN89_03735 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator
D RAN89_05240 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator
D RAN89_08415 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator
D RAN89_18030 response regulator K02483 K02483; two-component system, OmpR family, response regulator
D RAN89_18325 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator
D RAN89_17755 response regulator transcription factor K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D RAN89_08740 histidine kinase K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3]
D RAN89_08745 LytTR family DNA-binding domain-containing protein K08083 algR; two-component system, LytTR family, response regulator AlgR
D RAN89_09585 glnL; (GenBank) nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D RAN89_09590 ntrC; (GenBank) nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D RAN89_00580 ATP-binding protein K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D RAN89_00575 response regulator K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D RAN89_05745 ATP-binding protein K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D RAN89_05740 sigma-54 dependent transcriptional regulator K02667 pilR; two-component system, NtrC family, response regulator PilR
D RAN89_00125 chemotaxis protein CheW K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RAN89_17730 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RAN89_00130 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RAN89_00305 cheY; (GenBank) chemotaxis response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RAN89_06745 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RAN89_07870 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RAN89_17740 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RAN89_00105 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RAN89_17705 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RAN89_03940 chemotaxis protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D RAN89_11590 chemotaxis protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D RAN89_05910 Hpt domain-containing protein K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D RAN89_05890 response regulator K02657 pilG; twitching motility two-component system response regulator PilG
D RAN89_05895 response regulator K02658 pilH; twitching motility two-component system response regulator PilH
D RAN89_02670 PAS domain S-box protein K11711 dctS; two-component system, LuxR family, sensor histidine kinase DctS [EC:2.7.13.3]
D RAN89_02665 response regulator K11712 dctR; two-component system, LuxR family, response regulator DctR
D RAN89_06865 PAS domain-containing sensor histidine kinase K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3]
D RAN89_10410 response regulator K13815 rpfG; two-component system, response regulator RpfG
D RAN89_11025 ATP-binding protein K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D RAN89_11020 response regulator transcription factor K15012 regA; two-component system, response regulator RegA
D RAN89_01200 hybrid sensor histidine kinase/response regulator K20975 K20975; two-component system, sensor histidine kinase [EC:2.7.13.3]
D RAN89_10195 ATP-binding protein K20975 K20975; two-component system, sensor histidine kinase [EC:2.7.13.3]
D RAN89_15760 ANTAR domain-containing protein K07183 nasT; two-component system, response regulator / RNA-binding antiterminator
D RAN89_02325 response regulator K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
C 02035 Bacterial motility proteins [BR:rmk02035]
D RAN89_00125 chemotaxis protein CheW K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RAN89_17730 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RAN89_00120 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D RAN89_10225 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D RAN89_17720 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D RAN89_17710 chemotaxis protein CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D RAN89_00115 CheR family methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D RAN89_17715 CheR family methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D RAN89_00105 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RAN89_17705 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RAN89_00130 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RAN89_00305 cheY; (GenBank) chemotaxis response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RAN89_06745 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RAN89_07870 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RAN89_17740 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RAN89_00310 protein phosphatase CheZ K03414 cheZ; chemotaxis protein CheZ
D RAN89_12055 protein phosphatase CheZ K03414 cheZ; chemotaxis protein CheZ
D RAN89_03940 chemotaxis protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D RAN89_11590 chemotaxis protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D RAN89_00415 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RAN89_00715 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RAN89_00995 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RAN89_01000 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RAN89_01070 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RAN89_01165 Cache 3/Cache 2 fusion domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D RAN89_01180 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RAN89_01220 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RAN89_02810 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RAN89_02950 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RAN89_05415 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RAN89_06875 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RAN89_07610 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RAN89_07855 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RAN89_07995 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RAN89_09245 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RAN89_09710 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RAN89_10230 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RAN89_10700 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RAN89_13515 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RAN89_13595 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RAN89_13660 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RAN89_13665 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RAN89_14475 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RAN89_14950 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RAN89_15160 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RAN89_16250 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RAN89_17725 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RAN89_17745 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RAN89_17940 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RAN89_08595 methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor
D RAN89_00200 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D RAN89_00195 fliI; (GenBank) flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D RAN89_00190 fliJ; (GenBank) flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ
D RAN89_00165 flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D RAN89_00160 fliP; (GenBank) flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D RAN89_00155 fliQ; (GenBank) flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D RAN89_00150 fliR; (GenBank) flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D RAN89_00315 EscU/YscU/HrcU family type III secretion system export apparatus switch protein K02401 flhB; flagellar biosynthesis protein FlhB
D RAN89_00205 fliG; (GenBank) flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D RAN89_00175 fliM; (GenBank) flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D RAN89_00170 fliN; (GenBank) flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D RAN89_00210 fliF; (GenBank) flagellar basal-body MS-ring/collar protein FliF K02409 fliF; flagellar M-ring protein FliF
D RAN89_00390 flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D RAN89_00350 flgA; (GenBank) flagellar basal body P-ring formation chaperone FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D RAN89_00385 flagellar basal body L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D RAN89_00180 flagellar basal body-associated FliL family protein K02415 fliL; flagellar protein FliL
D RAN89_00215 fliE; (GenBank) flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D RAN89_00185 flagellar hook-length control protein FliK K02414 fliK; flagellar hook-length control protein FliK
D RAN89_00355 flgB; (GenBank) flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D RAN89_00360 flgC; (GenBank) flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D RAN89_00365 flagellar hook capping FlgD N-terminal domain-containing protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D RAN89_00375 flagellar basal body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D RAN89_00380 flgG; (GenBank) flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D RAN89_00395 flgJ; (GenBank) flagellar assembly peptidoglycan hydrolase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ
D RAN89_00370 flgE; (GenBank) flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D RAN89_00400 flgK; (GenBank) flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D RAN89_00405 flgL; (GenBank) flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D RAN89_00275 flagellin K02406 fliC; flagellin
D RAN89_00280 flagellin K02406 fliC; flagellin
D RAN89_00270 fliD; (GenBank) flagellar filament capping protein FliD K02407 fliD; flagellar hook-associated protein 2
D RAN89_00265 fliS; (GenBank) flagellar export chaperone FliS K02422 fliS; flagellar secretion chaperone FliS
D RAN89_00260 flagellar protein FliT K02423 fliT; flagellar protein FliT
D RAN89_00285 flhD; (GenBank) flagellar transcriptional regulator FlhD K02403 flhD; flagellar transcriptional activator FlhD
D RAN89_00290 flhC; (GenBank) flagellar transcriptional regulator FlhC K02402 flhC; flagellar transcriptional activator FlhC
D RAN89_00335 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
D RAN89_03015 FliA/WhiG family RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA
D RAN89_00295 motA; (GenBank) flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D RAN89_00300 motB; (GenBank) flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D RAN89_00345 flgM; (GenBank) flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D RAN89_00325 flhF; (GenBank) flagellar biosynthesis protein FlhF K02404 flhF; flagellar biosynthesis protein FlhF
D RAN89_07740 MinD/ParA family protein K04562 flhG; flagellar biosynthesis protein FlhG
D RAN89_05890 response regulator K02657 pilG; twitching motility two-component system response regulator PilG
D RAN89_05895 response regulator K02658 pilH; twitching motility two-component system response regulator PilH
D RAN89_05900 chemotaxis protein CheW K02659 pilI; twitching motility protein PilI
D RAN89_05905 methyl-accepting chemotaxis protein K02660 pilJ; twitching motility protein PilJ
D RAN89_05910 Hpt domain-containing protein K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D RAN89_05740 sigma-54 dependent transcriptional regulator K02667 pilR; two-component system, NtrC family, response regulator PilR
D RAN89_05745 ATP-binding protein K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D RAN89_01240 type IV pilus twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D RAN89_01245 PilT/PilU family type 4a pilus ATPase K02670 pilU; twitching motility protein PilU
D RAN89_12310 PilT/PilU family type 4a pilus ATPase K02670 pilU; twitching motility protein PilU
D RAN89_03805 pilin K02650 pilA; type IV pilus assembly protein PilA
D RAN89_07360 pilB; (GenBank) type IV-A pilus assembly ATPase PilB K02652 pilB; type IV pilus assembly protein PilB
D RAN89_07355 type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC
D RAN89_07350 A24 family peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D RAN89_11255 pilW; (GenBank) type IV pilus biogenesis/stability protein PilW K02656 pilF; type IV pilus assembly protein PilF
D RAN89_07055 type IV pilus secretin PilQ K02666 pilQ; type IV pilus assembly protein PilQ
D RAN89_07050 pilus assembly protein PilP K02665 pilP; type IV pilus assembly protein PilP
D RAN89_07045 type 4a pilus biogenesis protein PilO K02664 pilO; type IV pilus assembly protein PilO
D RAN89_07040 PilN domain-containing protein K02663 pilN; type IV pilus assembly protein PilN
D RAN89_07035 pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
D RAN89_12030 pilus assembly protein PilZ K02676 pilZ; type IV pilus assembly protein PilZ
D RAN89_10850 pilV; (GenBank) type IV pilus modification protein PilV K02671 pilV; type IV pilus assembly protein PilV
D RAN89_10845 PilW family protein K02672 pilW; type IV pilus assembly protein PilW
D RAN89_10840 pilus assembly protein PilX K02673 pilX; type IV pilus assembly protein PilX
D RAN89_10835 PilC/PilY family type IV pilus protein K02674 pilY1; type IV pilus assembly protein PilY1
D RAN89_10830 type IV pilin protein K02655 pilE; type IV pilus assembly protein PilE
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:rmk04812]
D RAN89_01730 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D RAN89_05590 ftsZ; (GenBank) cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D RAN89_05585 ftsA; (GenBank) cell division protein FtsA K03590 ftsA; cell division protein FtsA
D RAN89_02910 minC; (GenBank) septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D RAN89_02915 minD; (GenBank) septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D RAN89_02920 minE; (GenBank) cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D RAN89_02765 ParA family protein K03496 parA; chromosome partitioning protein
D RAN89_03400 ParA family protein K03496 parA; chromosome partitioning protein
D RAN89_06510 ParA family protein K03496 parA; chromosome partitioning protein
D RAN89_14985 ParA family protein K03496 parA; chromosome partitioning protein
D RAN89_02750 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:rmk04147]
D RAN89_05005 htpG; (GenBank) molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D RAN89_15385 eno; (GenBank) phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RAN89_03425 gap; (GenBank) type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RAN89_04060 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D RAN89_04070 pyk; (GenBank) pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RAN89_10895 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D RAN89_00480 groL; (GenBank) chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RAN89_17775 groL; (GenBank) chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RAN89_14800 dnaK; (GenBank) molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D RAN89_17795 pgi; (GenBank) glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RAN89_11985 guaB; (GenBank) IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D RAN89_00645 tuf; (GenBank) elongation factor Tu K02358 tuf; elongation factor Tu
D RAN89_01590 tuf; (GenBank) elongation factor Tu K02358 tuf; elongation factor Tu
D RAN89_07230 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D RAN89_08255 bile acid:sodium symporter family protein K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D RAN89_04265 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D RAN89_05050 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D RAN89_05335 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D RAN89_06610 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D RAN89_08230 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D RAN89_11405 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAN89_12915 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAN89_16235 acetyl-CoA C-acyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAN89_18400 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAN89_18475 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAN89_18260 ahcY; (GenBank) adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D RAN89_14180 adk; (GenBank) adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D RAN89_03205 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D RAN89_08735 argH; (GenBank) argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D RAN89_16690 argG; (GenBank) argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D RAN89_02290 hydA; (GenBank) dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D RAN89_13155 fahA; (GenBank) fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
D RAN89_16825 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D RAN89_11510 glgB; (GenBank) 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D RAN89_04595 glpK; (GenBank) glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30]
D RAN89_06800 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RAN89_09575 glnA; (GenBank) type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RAN89_13020 type III glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RAN89_13050 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RAN89_01635 hemB; (GenBank) porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D RAN89_13165 hppD; (GenBank) 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D RAN89_14720 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D RAN89_09170 4a-hydroxytetrahydrobiopterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D RAN89_14195 D-2-hydroxyacid dehydrogenase family protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D RAN89_05865 purH; (GenBank) bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D RAN89_09175 M48 family metallopeptidase K06013 STE24; STE24 endopeptidase [EC:3.4.24.84]
D RAN89_10970 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RAN89_11195 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RAN89_14840 electron transfer flavoprotein subunit alpha/FixB family protein K03522 fixB; electron transfer flavoprotein alpha subunit
D RAN89_15625 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D RAN89_17805 zwf; (GenBank) glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D RAN89_15725 tpiA; (GenBank) triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D RAN89_07760 gpmA; (GenBank) 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D RAN89_14525 lipocalin family protein K03098 APOD; apolipoprotein D and lipocalin family protein
C 02048 Prokaryotic defense system [BR:rmk02048]
D RAN89_04855 DEAD/DEAH box helicase family protein K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D RAN89_04865 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D RAN89_04870 class I SAM-dependent DNA methyltransferase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D RAN89_13520 Dam family site-specific DNA-(adenine-N6)-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D RAN89_16710 dcm; (GenBank) DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RAN89_13870 type II toxin-antitoxin system YafQ family toxin K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-]
D RAN89_13875 type II toxin-antitoxin system RelB/DinJ family antitoxin K07473 dinJ; DNA-damage-inducible protein J
D RAN89_13830 HipA domain-containing protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D RAN89_17260 type II toxin-antitoxin system death-on-curing family toxin K07341 doc; death on curing protein
D RAN89_06715 type II toxin-antitoxin system VapC family toxin K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D RAN89_06720 AbrB/MazE/SpoVT family DNA-binding domain-containing protein K18829 mvpT; antitoxin VapB
D RAN89_05590 ftsZ; (GenBank) cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D RAN89_01730 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D RAN89_15310 parC; (GenBank) DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D RAN89_15320 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D RAN89_16650 gltX; (GenBank) glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RAN89_09065 succinate dehydrogenase assembly factor 2 K09159 cptB; antitoxin CptB
D RAN89_10740 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RAN89_13135 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides [BR:rmk04052]
D RAN89_05100 acyl-CoA-binding protein K08762 DBI; diazepam-binding inhibitor (GABA receptor modulator, acyl-CoA-binding protein)
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:rmk01504]
D RAN89_09275 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D RAN89_15285 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D RAN89_16490 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D RAN89_09280 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D RAN89_15290 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D RAN89_16495 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D RAN89_14645 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D RAN89_15295 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D RAN89_14280 efflux RND transporter periplasmic adaptor subunit K18302 mexJ; membrane fusion protein, multidrug efflux system
D RAN89_14275 efflux RND transporter permease subunit K18303 mexK; multidrug efflux pump
D RAN89_02835 cueR; (GenBank) Cu(I)-responsive transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D RAN89_16510 TolC family outer membrane protein K12340 tolC; outer membrane protein
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:rmk03100]
D RAN89_00015 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RAN89_00040 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RAN89_00065 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RAN89_00090 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RAN89_16645 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RAN89_01375 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RAN89_10325 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RAN89_17350 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RAN89_11670 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D RAN89_16625 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D RAN89_16635 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D RAN89_14240 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D RAN89_17475 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D RAN89_16630 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D RAN89_16640 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D RAN89_00655 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RAN89_05485 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RAN89_14245 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RAN89_14030 tRNA-His K14226 tRNA-His; tRNA His
D RAN89_00020 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D RAN89_00045 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D RAN89_00070 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D RAN89_00095 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D RAN89_08520 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RAN89_09800 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RAN89_14235 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RAN89_14270 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RAN89_15715 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RAN89_12330 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D RAN89_12335 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D RAN89_04695 tRNA-Met K14230 tRNA-Met; tRNA Met
D RAN89_05790 tRNA-Met K14230 tRNA-Met; tRNA Met
D RAN89_17420 tRNA-Ile K14230 tRNA-Met; tRNA Met
D RAN89_00570 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D RAN89_07535 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D RAN89_10320 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D RAN89_12970 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D RAN89_08145 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RAN89_10930 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RAN89_11865 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RAN89_17285 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RAN89_00650 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RAN89_07300 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RAN89_16830 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RAN89_00640 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D RAN89_00660 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D RAN89_09785 tRNA-Val K14237 tRNA-Val; tRNA Val
D RAN89_10775 tRNA-Val K14237 tRNA-Val; tRNA Val
D RAN89_14040 tRNA-Val K14237 tRNA-Val; tRNA Val
D RAN89_00025 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RAN89_00050 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RAN89_00075 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RAN89_00100 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RAN89_00010 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RAN89_00035 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RAN89_00060 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RAN89_00085 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RAN89_00005 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D RAN89_00030 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D RAN89_00055 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D RAN89_00080 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D RAN89_05450 rnpB; (GenBank) RNase P RNA component class A K01978 rnpB; RNase P catalytic RNA component
D RAN89_09430 ssrA; (GenBank) transfer-messenger RNA K15035 ssrA; transfer-messenger RNA
D RAN89_09460 ssrA; (GenBank) transfer-messenger RNA K15035 ssrA; transfer-messenger RNA
D RAN89_10135 ffs; (GenBank) signal recognition particle sRNA small type K01983 ffs; signal recognition particle 4.5S RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D RAN89_11120 L-idonate 5-dehydrogenase K00098 idnD; L-idonate 5-dehydrogenase [EC:1.1.1.264]
D RAN89_16225 SDR family NAD(P)-dependent oxidoreductase K16216 yueD; benzil reductase ((S)-benzoin forming) [EC:1.1.1.320]
D RAN89_05665 NAD(P)-dependent oxidoreductase K08319 ltnD; L-threonate 2-dehydrogenase [EC:1.1.1.411]
D RAN89_01480 mgrA; (GenBank) L-glyceraldehyde 3-phosphate reductase K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-]
D RAN89_11820 PQQ-dependent sugar dehydrogenase K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-]
D RAN89_08085 (2Fe-2S)-binding protein K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3]
D RAN89_08095 xanthine dehydrogenase family protein subunit M K03519 coxM; aerobic carbon-monoxide dehydrogenase medium subunit [EC:1.2.5.3]
D RAN89_08090 xanthine dehydrogenase family protein molybdopterin-binding subunit K03520 coxL; aerobic carbon-monoxide dehydrogenase large subunit [EC:1.2.5.3]
D RAN89_04000 indolepyruvate ferredoxin oxidoreductase family protein K04090 E1.2.7.8; indolepyruvate ferredoxin oxidoreductase [EC:1.2.7.8]
D RAN89_09765 electron transfer flavoprotein-ubiquinone oxidoreductase K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1]
D RAN89_14465 FAD-dependent oxidoreductase K18208 RNLS; renalase [EC:1.6.3.5]
D RAN89_08320 quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D RAN89_13455 NADPH:quinone oxidoreductase family protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D RAN89_07965 NAD(P)H-dependent oxidoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D RAN89_16140 ahpF; (GenBank) alkyl hydroperoxide reductase subunit F K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-]
D RAN89_16480 msrA; (GenBank) peptide-methionine (S)-S-oxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D RAN89_12210 msrB; (GenBank) peptide-methionine (R)-S-oxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D RAN89_02305 yghU; (GenBank) glutathione-dependent disulfide-bond oxidoreductase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D RAN89_07865 glutathione S-transferase N-terminal domain-containing protein K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D RAN89_07010 msrP; (GenBank) protein-methionine-sulfoxide reductase catalytic subunit MsrP K07147 msrP; methionine sulfoxide reductase catalytic subunit [EC:1.8.-.-]
D RAN89_13285 peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D RAN89_16150 ahpC; (GenBank) alkyl hydroperoxide reductase subunit C K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26]
D RAN89_04470 organic hydroperoxide resistance protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D RAN89_06900 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D RAN89_14455 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D RAN89_17590 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D RAN89_02475 TauD/TfdA family dioxygenase K22303 atsK; alkyl sulfatase [EC:1.14.11.77]
D RAN89_13390 Fe2+-dependent dioxygenase K07336 K07336; PKHD-type hydroxylase [EC:1.14.11.-]
D RAN89_02455 LLM class flavin-dependent oxidoreductase K24116 scmK; N-acetyl-S-(2-succino)cysteine monooxygenase [EC:1.14.-.-]
D RAN89_02535 copper oxidase K22348 moxA; manganese oxidase [EC:1.16.3.3]
D RAN89_14295 hpnE; (GenBank) hydroxysqualene dehydroxylase HpnE K21677 hpnE; hydroxysqualene dehydroxylase [EC:1.17.8.1]
D RAN89_14550 ferredoxin--NADP reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D RAN89_09985 arsC; (GenBank) arsenate reductase (glutaredoxin) K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D RAN89_09995 arsenate reductase ArsC K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D RAN89_13445 protein-L-isoaspartate(D-aspartate) O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D RAN89_16500 protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D RAN89_03885 cyclopropane-fatty-acyl-phospholipid synthase family protein K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D RAN89_08245 beta-ketoacyl-ACP synthase III K16872 E2.3.1.207; beta-ketodecanoyl-[acyl-carrier-protein] synthase [EC:2.3.1.207]
D RAN89_18565 lnt; (GenBank) apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D RAN89_13725 GNAT family N-acetyltransferase K03829 yedL; putative acetyltransferase [EC:2.3.1.-]
D RAN89_17255 GNAT family N-acetyltransferase K03829 yedL; putative acetyltransferase [EC:2.3.1.-]
D RAN89_10315 aat; (GenBank) leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D RAN89_14870 DUF3488 and transglutaminase-like domain-containing protein K22452 tgpA; protein-glutamine gamma-glutamyltransferase [EC:2.3.2.13]
D RAN89_10310 arginyltransferase K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29]
D RAN89_02335 tRNA-uridine aminocarboxypropyltransferase K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25]
D RAN89_03465 tRNA-uridine aminocarboxypropyltransferase K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25]
D RAN89_10370 lgt; (GenBank) prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D RAN89_13330 pyruvate, water dikinase regulatory protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D RAN89_03915 glnE; (GenBank) bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D RAN89_12205 YdiU family protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108]
D RAN89_18510 aceK; (GenBank) bifunctional isocitrate dehydrogenase kinase/phosphatase K00906 aceK; isocitrate dehydrogenase kinase/phosphatase [EC:2.7.11.5 3.1.3.-]
D RAN89_04295 hprK; (GenBank) HPr(Ser) kinase/phosphatase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-]
D RAN89_11445 ybgC; (GenBank) tol-pal system-associated acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D RAN89_14100 thioesterase family protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D RAN89_08200 3',5'-nucleoside bisphosphate phosphatase K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D RAN89_10025 histidine phosphatase family protein K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D RAN89_02320 two-component system response regulator K07814 K07814; cyclic di-GMP phosphodiesterase [EC:3.1.4.-]
D RAN89_02740 HD domain-containing phosphohydrolase K07814 K07814; cyclic di-GMP phosphodiesterase [EC:3.1.4.-]
D RAN89_14220 HD-GYP domain-containing protein K25135 K25135; cyclic di-GMP phosphodiesterase [EC:3.1.4.-]
D RAN89_12025 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D RAN89_16185 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D RAN89_04040 def; (GenBank) peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D RAN89_12275 def; (GenBank) peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D RAN89_03925 carbon-nitrogen hydrolase family protein K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128]
D RAN89_17000 8-oxoguanine deaminase K18456 E3.5.4.32; 8-oxoguanine deaminase [EC:3.5.4.32]
D RAN89_07405 NUDIX domain-containing protein K03207 gmm; GDP-mannose mannosyl hydrolase [EC:3.6.1.-]
D RAN89_08815 Maf family nucleotide pyrophosphatase K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-]
D RAN89_14860 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D RAN89_02450 alpha/beta hydrolase K07002 RBBP9; serine hydrolase [EC:3.-.-.-]
D RAN89_02760 alpha/beta fold hydrolase K07002 RBBP9; serine hydrolase [EC:3.-.-.-]
D RAN89_09525 transaldolase family protein K08313 fsaA; fructose-6-phosphate aldolase 1 [EC:4.1.2.-]
D RAN89_11100 altronate dehydratase family protein K26399 K26399; arabinonate dehydratase [EC:4.2.1.5]
D RAN89_09810 NAD(P)H-hydrate dehydratase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D RAN89_01790 RbsD/FucU domain-containing protein K02431 fucU; L-fucose mutarotase [EC:5.1.3.29]
D RAN89_03980 rhaM; (GenBank) L-rhamnose mutarotase K03534 rhaM; L-rhamnose mutarotase [EC:5.1.3.32]
D RAN89_11640 L-rhamnose mutarotase K03534 rhaM; L-rhamnose mutarotase [EC:5.1.3.32]
D RAN89_02370 hydroxypyruvate isomerase family protein K22131 otnI; 2-dehydrotetronate isomerase [EC:5.3.1.35]
D RAN89_04845 methylmalonyl-CoA mutase family protein K11942 icmF; isobutyryl-CoA mutase [EC:5.4.99.13]
D RAN89_01090 feruloyl-CoA synthase K12508 fcs; feruloyl-CoA synthase [EC:6.2.1.34]
D RAN89_07785 cphA; (GenBank) cyanophycin synthetase K03802 cphA; cyanophycin synthetase [EC:6.3.2.29 6.3.2.30]
D RAN89_07790 cphA; (GenBank) cyanophycin synthetase K03802 cphA; cyanophycin synthetase [EC:6.3.2.29 6.3.2.30]
D RAN89_05685 mpl; (GenBank) UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45]
D RAN89_02120 DNA ligase K26441 lig; DNA ligase [EC:6.5.1.1]
D RAN89_10705 rsxB; (GenBank) electron transport complex subunit RsxB K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D RAN89_10420 cation-translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D RAN89_01875 cation-translocating P-type ATPase K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
C 99981 Carbohydrate metabolism
C 99982 Energy metabolism
D RAN89_08015 formate dehydrogenase accessory sulfurtransferase FdhD K02379 fdhD; FdhD protein
D RAN89_11680 ferredoxin family protein K05524 fdxA; ferredoxin
D RAN89_10745 iscU; (GenBank) Fe-S cluster assembly scaffold IscU K04488 iscU; nitrogen fixation protein NifU and related proteins
D RAN89_14845 electron transfer flavoprotein subunit beta/FixA family protein K03521 fixA; electron transfer flavoprotein beta subunit
C 99983 Lipid metabolism
D RAN89_12165 isovaleryl-CoA dehydrogenase K09456 aidB; putative acyl-CoA dehydrogenase
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D RAN89_13125 VOC family protein K08234 yaeR; glyoxylase I family protein
D RAN89_16325 M14 family murein peptide amidase A K14054 mpaA; murein peptide amidase A
D RAN89_01235 YggS family pyridoxal phosphate-dependent enzyme K06997 yggS; PLP dependent protein
D RAN89_06445 GNAT family protein K22479 argA; N-acetyltransferase
C 99986 Glycan metabolism
D RAN89_09375 LapA family protein K08992 lapA; lipopolysaccharide assembly protein A
D RAN89_09370 lapB; (GenBank) lipopolysaccharide assembly protein LapB K19804 lapB; lipopolysaccharide assembly protein B
C 99987 Cofactor metabolism
D RAN89_12845 cobW; (GenBank) cobalamin biosynthesis protein CobW K02234 cobW; cobalamin biosynthesis protein CobW
D RAN89_08775 heme biosynthesis HemY N-terminal domain-containing protein K02498 hemY; HemY protein
D RAN89_07685 ubiB; (GenBank) ubiquinone biosynthesis regulatory protein kinase UbiB K03688 ubiB; ubiquinone biosynthesis protein
D RAN89_07680 hypothetical protein K03690 ubiJ; ubiquinone biosynthesis accessory factor UbiJ
D RAN89_17955 mobB; (GenBank) molybdopterin-guanine dinucleotide biosynthesis protein B K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein
D RAN89_12830 VWA domain-containing protein K13580 K13580; magnesium chelatase subunit ChlD-like protein
C 99988 Secondary metabolism
C 99999 Others
D RAN89_03265 DoxX family protein K15977 K15977; putative oxidoreductase
D RAN89_17585 DoxX family protein K15977 K15977; putative oxidoreductase
D RAN89_03385 ypfH; (GenBank) esterase K06999 K06999; phospholipase/carboxylesterase
D RAN89_17565 alpha/beta fold hydrolase K06999 K06999; phospholipase/carboxylesterase
D RAN89_08365 bifunctional acetate--CoA ligase family protein/GNAT family N-acetyltransferase K09181 yfiQ; acetyltransferase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D RAN89_01945 glnK; (GenBank) P-II family nitrogen regulator K04752 glnK; nitrogen regulatory protein P-II 2
D RAN89_12105 Tex family protein K06959 tex; protein Tex
C 99974 Translation
D RAN89_14810 MBL fold metallo-hydrolase K07576 K07576; metallo-beta-lactamase family protein
C 99975 Protein processing
D RAN89_14125 clpS; (GenBank) ATP-dependent Clp protease adapter ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D RAN89_14265 tig; (GenBank) trigger factor K03545 tig; trigger factor
D RAN89_07015 protein-methionine-sulfoxide reductase heme-binding subunit MsrQ K17247 msrQ; methionine sulfoxide reductase heme-binding subunit
D RAN89_17270 ureE; (GenBank) urease accessory protein UreE K03187 ureE; urease accessory protein
D RAN89_17275 urease accessory UreF family protein K03188 ureF; urease accessory protein
D RAN89_17280 ureG; (GenBank) urease accessory protein UreG K03189 ureG; urease accessory protein
D RAN89_17135 urease accessory protein UreD K03190 ureD; urease accessory protein
D RAN89_17240 HupE/UreJ family protein K03192 ureJ; urease accessory protein
D RAN89_11965 smpB; (GenBank) SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein
D RAN89_01950 YifB family Mg chelatase-like AAA ATPase K07391 comM; magnesium chelatase family protein
D RAN89_15875 proteasome-type protease K07395 K07395; putative proteasome-type protease
D RAN89_08710 DsbA family protein K07396 K07396; putative protein-disulfide isomerase
D RAN89_17835 OsmC family protein K07397 yhfA; putative redox protein
D RAN89_07000 cytochrome c biogenesis protein ResB K07399 resB; cytochrome c biogenesis protein
D RAN89_08115 XdhC family protein K07402 xdhC; xanthine dehydrogenase accessory factor
D RAN89_17075 xdhC; (GenBank) xanthine dehydrogenase accessory protein XdhC K07402 xdhC; xanthine dehydrogenase accessory factor
C 99976 Replication and repair
D RAN89_08125 radC; (GenBank) DNA repair protein RadC K03630 radC; DNA repair protein RadC
D RAN89_14080 rmuC; (GenBank) DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC
D RAN89_01265 YraN family protein K07460 yraN; putative endonuclease
D RAN89_04030 dprA; (GenBank) DNA-processing protein DprA K04096 smf; DNA processing protein
D RAN89_08475 replication-associated recombination protein A K07478 ycaJ; putative ATPase
D RAN89_05325 IS30 family transposase K07482 K07482; transposase, IS30 family
D RAN89_06820 IS30 family transposase K07482 K07482; transposase, IS30 family
D RAN89_10335 IS30 family transposase K07482 K07482; transposase, IS30 family
D RAN89_12075 IS30 family transposase K07482 K07482; transposase, IS30 family
D RAN89_12125 IS30 family transposase K07482 K07482; transposase, IS30 family
D RAN89_12810 IS30 family transposase K07482 K07482; transposase, IS30 family
D RAN89_05320 IS110 family transposase K07486 K07486; transposase
D RAN89_06815 IS110 family transposase K07486 K07486; transposase
D RAN89_07095 transposase K07491 rayT; REP-associated tyrosine transposase
C 99979 Viral proteins
C 99998 Others
D RAN89_03090 rhodanese-like domain-containing protein K03972 pspE; phage shock protein E
D RAN89_10145 YbaB/EbfC family nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC
D RAN89_09540 DASH family cryptochrome K25656 cry; cryptochrome
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D RAN89_09120 anion permease K03306 TC.PIT; inorganic phosphate transporter, PiT family
D RAN89_03440 bile acid:sodium symporter family protein K03453 TC.BASS; bile acid:Na+ symporter, BASS family
C 99978 Cell growth
D RAN89_12215 septation protein A K06190 ispZ; intracellular septation protein
C 99993 Cell motility
C 99995 Signaling proteins
D RAN89_11935 typA; (GenBank) translational GTPase TypA K06207 typA; GTP-binding protein
D RAN89_18160 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D RAN89_13290 PhoH family protein K07175 phoH2; PhoH-like ATPase
D RAN89_16745 YajQ family cyclic di-GMP-binding protein K09767 yajQ; cyclic-di-GMP-binding protein
C 99992 Structural proteins
D RAN89_08465 lolA; (GenBank) outer membrane lipoprotein chaperone LolA K03634 lolA; outer membrane lipoprotein carrier protein
D RAN89_17465 outer membrane lipoprotein LolB K02494 lolB; outer membrane lipoprotein LolB
D RAN89_07125 VacJ family lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA
D RAN89_07085 hypothetical protein K06077 slyB; outer membrane lipoprotein SlyB
D RAN89_09875 OmpH family outer membrane protein K06142 hlpA; outer membrane protein
D RAN89_13440 peptidoglycan DD-metalloendopeptidase family protein K06194 nlpD; lipoprotein NlpD
D RAN89_17390 AsmA family protein K07289 asmA; AsmA protein
D RAN89_15910 efflux RND transporter periplasmic adaptor subunit K02005 ABC.CD.TX; HlyD family secretion protein
D RAN89_09645 glycine zipper 2TM domain-containing protein K04062 osmB; osmotically inducible lipoprotein OsmB
D RAN89_11260 helix-turn-helix domain-containing protein K15539 rodZ; cytoskeleton protein RodZ
C 99994 Others
D RAN89_10080 phoU; (GenBank) phosphate signaling complex protein PhoU K02039 phoU; phosphate transport system protein
D RAN89_13380 (2Fe-2S)-binding protein K02192 bfd; bacterioferritin-associated ferredoxin
D RAN89_16555 phnK; (GenBank) phosphonate C-P lyase system protein PhnK K05781 phnK; putative phosphonate transport system ATP-binding protein
D RAN89_00735 apaG; (GenBank) Co2+/Mg2+ efflux protein ApaG K06195 apaG; ApaG protein
D RAN89_07025 cyaY; (GenBank) iron donor protein CyaY K06202 cyaY; iron-sulfur cluster assembly protein CyaY
D RAN89_16260 hemerythrin domain-containing protein K07216 hr; hemerythrin
D RAN89_13355 imelysin family protein K07231 K07231; putative iron-regulated protein
B
B 09194 Poorly characterized
C 99996 General function prediction only
D RAN89_16665 CvpA family protein K03558 cvpA; membrane protein required for colicin V production
D RAN89_12155 GNAT family N-acetyltransferase K02348 elaA; ElaA protein
D RAN89_08070 group II truncated hemoglobin K06886 glbN; hemoglobin
D RAN89_08665 group 1 truncated hemoglobin K06886 glbN; hemoglobin
D RAN89_07980 patatin-like phospholipase family protein K07001 K07001; NTE family protein
D RAN89_14110 patatin-like phospholipase family protein K07001 K07001; NTE family protein
D RAN89_17545 patatin-like phospholipase family protein K07001 K07001; NTE family protein
D RAN89_17595 patatin-like phospholipase family protein K07001 K07001; NTE family protein
D RAN89_17780 HAD family phosphatase K07025 K07025; putative hydrolase of the HAD superfamily
D RAN89_18215 erpA; (GenBank) iron-sulfur cluster insertion protein ErpA K15724 erpA; iron-sulfur cluster insertion protein
D RAN89_09640 YihY family inner membrane protein K07058 K07058; membrane protein
D RAN89_14435 sulfurtransferase K07146 K07146; UPF0176 protein
D RAN89_14815 rhodanese-related sulfurtransferase K07146 K07146; UPF0176 protein
D RAN89_13415 heme-binding protein K11477 glcG; glc operon protein GlcG
D RAN89_09980 arsH; (GenBank) arsenical resistance protein ArsH K11811 arsH; arsenical resistance protein ArsH
D RAN89_00595 LemA family protein K03744 lemA; LemA protein
D RAN89_01400 LemA family protein K03744 lemA; LemA protein
D RAN89_02725 LemA family protein K03744 lemA; LemA protein
D RAN89_14320 SlyX family protein K03745 slyX; SlyX protein
D RAN89_04025 DUF494 domain-containing protein K03747 smg; Smg protein
D RAN89_16670 SPOR domain-containing protein K03749 dedD; DedD protein
D RAN89_15475 VTT domain-containing protein K03975 dedA; membrane-associated protein
D RAN89_17690 YhgE/Pip domain-containing protein K01421 yhgE; putative membrane protein
D RAN89_03825 phage holin family protein K08972 K08972; putative membrane protein
D RAN89_08635 DUF1304 domain-containing protein K08987 K08987; putative membrane protein
D RAN89_18445 YchJ family metal-binding protein K09858 K09858; SEC-C motif domain protein
C 99997 Function unknown
D RAN89_12020 ankyrin repeat domain-containing protein K06867 K06867; uncharacterized protein
D RAN89_18195 ankyrin repeat domain-containing protein K06867 K06867; uncharacterized protein
D RAN89_01405 TPM domain-containing protein K06872 K06872; uncharacterized protein
D RAN89_07325 ATP-binding protein K06923 K06923; uncharacterized protein
D RAN89_00530 CoA-binding protein K06929 K06929; uncharacterized protein
D RAN89_18295 DNA-binding protein K06934 K06934; uncharacterized protein
D RAN89_03835 DUF3717 domain-containing protein K06938 K06938; uncharacterized protein
D RAN89_15025 YkgJ family cysteine cluster protein K06940 K06940; uncharacterized protein
D RAN89_05750 PP0621 family protein K06950 K06950; uncharacterized protein
D RAN89_11470 M14 family metallopeptidase K06987 K06987; uncharacterized protein
D RAN89_12120 VOC family protein K06991 K06991; uncharacterized protein
D RAN89_00785 VOC family protein K06996 K06996; uncharacterized protein
D RAN89_05640 YqiA/YcfP family alpha/beta fold hydrolase K07000 K07000; uncharacterized protein
D RAN89_03505 pyridoxamine 5'-phosphate oxidase family protein K07005 K07005; uncharacterized protein
D RAN89_03530 pyridoxamine 5'-phosphate oxidase family protein K07006 K07006; uncharacterized protein
D RAN89_01615 alpha/beta fold hydrolase K07018 K07018; uncharacterized protein
D RAN89_01390 alpha/beta fold hydrolase K07019 K07019; uncharacterized protein
D RAN89_00865 UPF0149 family protein K07039 K07039; uncharacterized protein
D RAN89_01100 amidohydrolase family protein K07045 K07045; uncharacterized protein
D RAN89_16915 neutral zinc metallopeptidase K07054 K07054; uncharacterized protein
D RAN89_04710 sodium-dependent bicarbonate transport family permease K07086 K07086; uncharacterized protein
D RAN89_01710 TSUP family transporter K07090 K07090; uncharacterized protein
D RAN89_11435 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D RAN89_11710 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D RAN89_12900 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D RAN89_09215 PhoX family phosphatase K07093 K07093; uncharacterized protein
D RAN89_11325 phosphoribosyltransferase K07101 K07101; uncharacterized protein
D RAN89_02585 YeeE/YedE family protein K07112 K07112; uncharacterized protein
D RAN89_02590 YeeE/YedE family protein K07112 K07112; uncharacterized protein
D RAN89_14915 AbrB family transcriptional regulator K07120 K07120; uncharacterized protein
D RAN89_13375 tetratricopeptide repeat protein K07126 K07126; uncharacterized protein
D RAN89_14010 tetratricopeptide repeat protein K07126 K07126; uncharacterized protein
D RAN89_05420 NAD(P)/FAD-dependent oxidoreductase K07137 K07137; uncharacterized protein
D RAN89_05820 MOSC N-terminal beta barrel domain-containing protein K07140 K07140; MOSC domain-containing protein
D RAN89_01670 LON peptidase substrate-binding domain-containing protein K07157 K07157; uncharacterized protein
D RAN89_08105 VWA domain-containing protein K07161 K07161; uncharacterized protein
D RAN89_03185 yidD; (GenBank) membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein
D RAN89_14135 DUF192 domain-containing protein K09005 K09005; uncharacterized protein
D RAN89_15825 GatB/YqeY domain-containing protein K09117 K09117; uncharacterized protein
D RAN89_01460 DUF493 family protein K09158 K09158; uncharacterized protein
D RAN89_08110 carbon monoxide dehydrogenase subunit G K09386 K09386; uncharacterized protein
D RAN89_03890 DUF1365 domain-containing protein K09701 K09701; uncharacterized protein
D RAN89_08280 DUF808 domain-containing protein K09781 K09781; uncharacterized protein
D RAN89_14170 Trm112 family protein K09791 K09791; uncharacterized protein
D RAN89_10475 sulfite exporter TauE/SafE family protein K09792 K09792; uncharacterized protein
D RAN89_11975 RnfH family protein K09801 K09801; uncharacterized protein
D RAN89_08565 yaaA; (GenBank) peroxide stress protein YaaA K09861 K09861; uncharacterized protein
D RAN89_07335 DNA gyrase inhibitor YacG K09862 K09862; uncharacterized protein
D RAN89_08400 YceH family protein K09915 K09915; uncharacterized protein
D RAN89_10235 GNAT family N-acetyltransferase K09919 K09919; uncharacterized protein
D RAN89_05475 DUF484 family protein K09921 K09921; uncharacterized protein
D RAN89_02300 DMT family protein K09922 K09922; uncharacterized protein
D RAN89_10455 FixH family protein K09926 K09926; uncharacterized protein
D RAN89_17790 crosslink repair DNA glycosylase YcaQ family protein K09927 K09927; uncharacterized protein
D RAN89_03255 DUF692 domain-containing protein K09930 K09930; uncharacterized protein
D RAN89_11310 DUF2065 domain-containing protein K09937 K09937; uncharacterized protein
D RAN89_07075 DUF1415 domain-containing protein K09941 K09941; uncharacterized protein
D RAN89_13370 DUF1513 domain-containing protein K09947 K09947; uncharacterized protein
D RAN89_08965 DUF3820 family protein K09954 K09954; uncharacterized protein
D RAN89_03525 nuclear transport factor 2 family protein K09958 K09958; uncharacterized protein
D RAN89_04170 DUF779 domain-containing protein K09959 K09959; uncharacterized protein
D RAN89_14530 DUF2237 domain-containing protein K09966 K09966; uncharacterized protein
D RAN89_11505 TraB/GumN family protein K09973 K09973; uncharacterized protein
D RAN89_15135 HutD family protein K09975 K09975; uncharacterized protein
D RAN89_17615 zf-TFIIB domain-containing protein K09981 K09981; uncharacterized protein
D RAN89_06670 DUF1993 domain-containing protein K09983 K09983; uncharacterized protein
D RAN89_06620 DUF1272 domain-containing protein K09984 K09984; uncharacterized protein
D RAN89_06440 VWA domain-containing protein K09989 K09989; uncharacterized protein
D RAN89_09115 DUF47 domain-containing protein K07220 K07220; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: August 30, 2025