+D GENES KO #

  KEGG Orthology (KO) - Rickettsia montanensis

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A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:rmo00010] D MCI_00490 pyruvate phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D MCI_05940 pyruvate dehydrogenase e1 component, alpha subunit precursor K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D MCI_05945 pyruvate dehydrogenase subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D MCI_00630 branched-chain alpha-keto acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D MCI_03450 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D MCI_00970 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 00020 Citrate cycle (TCA cycle) [PATH:rmo00020] D MCI_03810 gltA; type II citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D MCI_03420 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D MCI_05965 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D MCI_05375 sucA; 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D MCI_05370 dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D MCI_03450 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D MCI_00970 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D MCI_00100 succinyl-CoA synthetase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D MCI_00105 sucC; succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D MCI_05055 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D MCI_04530 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D MCI_05045 succinate dehydrogenase cytochrome b-556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D MCI_05050 succinate dehydrogenase hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D MCI_02265 fumC; fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D MCI_06790 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D MCI_05940 pyruvate dehydrogenase e1 component, alpha subunit precursor K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D MCI_05945 pyruvate dehydrogenase subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D MCI_00630 branched-chain alpha-keto acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] C 00030 Pentose phosphate pathway D MCI_06190 ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] C 00040 Pentose and glucuronate interconversions D MCI_03300 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] C 00051 Fructose and mannose metabolism [PATH:rmo00051] D MCI_00385 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D MCI_06190 ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] C 00052 Galactose metabolism D MCI_06495 putative nucleoside-diphosphate sugar epimerase capD K17716 capD; UDP-glucose 4-epimerase [EC:5.1.3.2] C 00053 Ascorbate and aldarate metabolism D MCI_03300 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] C 00500 Starch and sucrose metabolism [PATH:rmo00500] D MCI_02720 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:rmo00520] D MCI_00905 UDP-N-acetylglucosamine pyrophosphorylase K11528 glmU; UDP-N-acetylglucosamine pyrophosphorylase [EC:2.7.7.23] D MCI_01620 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D MCI_05870 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D MCI_06500 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D MCI_03300 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D MCI_06495 putative nucleoside-diphosphate sugar epimerase capD K17716 capD; UDP-glucose 4-epimerase [EC:5.1.3.2] D MCI_00385 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] C 00620 Pyruvate metabolism [PATH:rmo00620] D MCI_05940 pyruvate dehydrogenase e1 component, alpha subunit precursor K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D MCI_05945 pyruvate dehydrogenase subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D MCI_00630 branched-chain alpha-keto acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D MCI_03450 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D MCI_00970 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D MCI_06760 bifunctional malic enzyme oxidoreductase/phosphotransacetylase K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D MCI_06790 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D MCI_02265 fumC; fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D MCI_00490 pyruvate phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D MCI_02925 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:rmo00630] D MCI_06790 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D MCI_03810 gltA; type II citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D MCI_03420 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D MCI_02925 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MCI_04445 acetoacetyl-CoA reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36] D MCI_01970 acetyl-CoA carboxylase, biotin carboxylase K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3] D MCI_01975 propionyl-CoA carboxylase beta chain precursor K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15] D MCI_00445 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D MCI_02980 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D MCI_03450 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D MCI_00970 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 00640 Propanoate metabolism [PATH:rmo00640] D MCI_03450 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D MCI_00970 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D MCI_01970 acetyl-CoA carboxylase, biotin carboxylase K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3] D MCI_01975 propionyl-CoA carboxylase beta chain precursor K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15] D MCI_00105 sucC; succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D MCI_00100 succinyl-CoA synthetase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] C 00650 Butanoate metabolism [PATH:rmo00650] D MCI_02925 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MCI_02930 poly-beta-hydroxybutyrate polymerase K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304] D MCI_04445 acetoacetyl-CoA reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36] D MCI_05055 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D MCI_04530 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D MCI_05045 succinate dehydrogenase cytochrome b-556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D MCI_05050 succinate dehydrogenase hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D MCI_00220 succinate semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D MCI_01730 Succinyl-CoA:3-ketoacid-coenzyme A transferase K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5] D MCI_01735 Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] D MCI_04110 oxidoreductase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30] C 00660 C5-Branched dibasic acid metabolism D MCI_00105 sucC; succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D MCI_00100 succinyl-CoA synthetase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] C 00562 Inositol phosphate metabolism [PATH:rmo00562] D MCI_05810 extragenic suppressor protein suhB K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:rmo00190] D MCI_06645 NADH:ubiquinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2] D MCI_06640 NADH dehydrogenase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2] D MCI_06635 NADH dehydrogenase subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2] D MCI_06630 NADH dehydrogenase subunit D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2] D MCI_06620 NADH dehydrogenase subunit E K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2] D MCI_04975 NADH dehydrogenase I subunit F K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2] D MCI_03410 NADH dehydrogenase subunit G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2] D MCI_03405 NADH:ubiquinone oxidoreductase subunit H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2] D MCI_03400 NADH dehydrogenase subunit I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2] D MCI_03365 NADH:ubiquinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2] D MCI_03370 NADH:ubiquinone oxidoreductase subunit K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2] D MCI_03375 NADH:ubiquinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2] D MCI_03380 NADH:ubiquinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2] D MCI_01215 NADH:ubiquinone oxidoreductase subunit N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2] D MCI_05055 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D MCI_04530 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D MCI_05045 succinate dehydrogenase cytochrome b-556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D MCI_05050 succinate dehydrogenase hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D MCI_05990 Ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D MCI_05995 cytochrome b K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D MCI_06005 cytochrome c1, heme protein precursor K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D MCI_06555 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D MCI_05440 cytochrome c oxidase subunit III K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9] D MCI_06980 cytochrome c oxidase polypeptide I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9] D MCI_06990 cytochrome c oxidase polypeptide II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9] D MCI_06225 cytochrome C oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11 D MCI_05920 cytochrome c oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9] D MCI_05640 cytochrome d ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D MCI_05645 cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D MCI_05895 cytochrome c K08738 CYC; cytochrome c D MCI_03440 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D MCI_03430 F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D MCI_03435 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D MCI_03445 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D MCI_03425 atpC; F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D MCI_04310 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D MCI_04290 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D MCI_04295 F0F1 ATP synthase subunit B' K02109 ATPF0B; F-type H+-transporting ATPase subunit b D MCI_04300 F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D MCI_01695 inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation by Calvin cycle [PATH:rmo00710] D MCI_06190 ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D MCI_00490 pyruvate phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D MCI_06760 bifunctional malic enzyme oxidoreductase/phosphotransacetylase K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D MCI_06790 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] C 00720 Other carbon fixation pathways [PATH:rmo00720] D MCI_00490 pyruvate phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D MCI_06790 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D MCI_02265 fumC; fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D MCI_05055 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D MCI_04530 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D MCI_05045 succinate dehydrogenase cytochrome b-556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D MCI_05050 succinate dehydrogenase hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D MCI_00100 succinyl-CoA synthetase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D MCI_00105 sucC; succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D MCI_02925 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MCI_05965 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D MCI_03420 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D MCI_00300 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] C 00680 Methane metabolism [PATH:rmo00680] D MCI_02980 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D MCI_06790 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] C 00910 Nitrogen metabolism [PATH:rmo00910] D MCI_03115 NAD-specific glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D MCI_00445 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] C 00920 Sulfur metabolism D MCI_06180 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:rmo00061] D MCI_03165 acpP; acyl carrier protein K02078 acpP; acyl carrier protein D MCI_02875 acyl-carrier-protein S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D MCI_03230 3-oxoacyl-(acyl carrier protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D MCI_03170 3-oxoacyl-(acyl carrier protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D MCI_03160 fabG; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D MCI_04190 fabZ; (3R)-hydroxymyristoyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D MCI_06690 enoyl-(acyl carrier protein) reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:rmo00071] D MCI_02925 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MCI_01985 acylglycerophosphoethanolamine acyltransferase K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism D MCI_01055 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 00564 Glycerophospholipid metabolism [PATH:rmo00564] D MCI_00185 gpsA; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D MCI_01055 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D MCI_03585 phospholipase D superfamily protein PLD K17717 pld; phospholipase D [EC:3.1.4.4] D MCI_01985 acylglycerophosphoethanolamine acyltransferase K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20] D MCI_00060 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D MCI_05825 CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D MCI_05820 phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D MCI_04560 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D MCI_03045 phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27] C 00565 Ether lipid metabolism D MCI_03585 phospholipase D superfamily protein PLD K17717 pld; phospholipase D [EC:3.1.4.4] C 00600 Sphingolipid metabolism C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism C 01040 Biosynthesis of unsaturated fatty acids [PATH:rmo01040] D MCI_04480 Acyl-CoA desaturase 1 K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1] B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:rmo00230] D MCI_05670 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D MCI_00450 putative cytoplasmic protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D MCI_04610 ndk; mulitfunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-phosphodiesterase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D MCI_03195 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D MCI_00340 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D MCI_00350 nrdF; ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D MCI_04670 deoxyguanosinetriphosphate triphosphohydrolase-like protein K01129 dgt; dGTPase [EC:3.1.5.1] D MCI_00790 guanosine polyphosphate pyrophosphohydrolase/synthetase K21138 HDDC3; guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [EC:3.1.7.2] D MCI_06160 guanosine pentaphosphate phosphohydrolase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D MCI_02135 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00240 Pyrimidine metabolism [PATH:rmo00240] D MCI_05195 pyrH; uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D MCI_04610 ndk; mulitfunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-phosphodiesterase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D MCI_03565 Maf-like protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D MCI_06810 pyrG; CTP synthetase K01937 pyrG; CTP synthase [EC:6.3.4.2] D MCI_00825 cmk; cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D MCI_04700 dcd; deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D MCI_00340 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D MCI_00350 nrdF; ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D MCI_02500 tmk; thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D MCI_06940 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D MCI_06210 thyX; FAD-dependent thymidylate synthase K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:rmo00250] D MCI_04800 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D MCI_00220 succinate semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D MCI_03115 NAD-specific glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D MCI_00445 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] C 00260 Glycine, serine and threonine metabolism [PATH:rmo00260] D MCI_03060 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D MCI_06340 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D MCI_02980 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D MCI_03790 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37] D MCI_03450 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D MCI_00970 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D MCI_05825 CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] C 00270 Cysteine and methionine metabolism [PATH:rmo00270] D MCI_00450 putative cytoplasmic protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D MCI_03060 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D MCI_06340 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D MCI_00080 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D MCI_04800 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D MCI_06790 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] C 00280 Valine, leucine and isoleucine degradation [PATH:rmo00280] D MCI_00080 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D MCI_03450 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D MCI_00970 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D MCI_01970 acetyl-CoA carboxylase, biotin carboxylase K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3] D MCI_01975 propionyl-CoA carboxylase beta chain precursor K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15] D MCI_01730 Succinyl-CoA:3-ketoacid-coenzyme A transferase K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5] D MCI_01735 Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] D MCI_02925 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:rmo00290] D MCI_00080 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] C 00300 Lysine biosynthesis [PATH:rmo00300] D MCI_03060 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D MCI_06340 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D MCI_00085 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D MCI_05155 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D MCI_05455 dapD; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117] D MCI_04035 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D MCI_07110 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D MCI_01765 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D MCI_01760 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:rmo00310] D MCI_05370 dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D MCI_03450 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D MCI_00970 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D MCI_02925 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MCI_00220 succinate semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00220 Arginine biosynthesis [PATH:rmo00220] D MCI_00445 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D MCI_03115 NAD-specific glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D MCI_04800 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D MCI_04895 acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8] C 00330 Arginine and proline metabolism D MCI_04800 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] C 00340 Histidine metabolism C 00350 Tyrosine metabolism [PATH:rmo00350] D MCI_04800 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D MCI_00220 succinate semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00360 Phenylalanine metabolism D MCI_04800 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] C 00380 Tryptophan metabolism [PATH:rmo00380] D MCI_05370 dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D MCI_03450 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D MCI_00970 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D MCI_02925 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:rmo00400] D MCI_04800 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism C 00430 Taurine and hypotaurine metabolism D MCI_03115 NAD-specific glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] C 00440 Phosphonate and phosphinate metabolism D MCI_04000 beta-lactamase K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55] C 00450 Selenocompound metabolism [PATH:rmo00450] D MCI_00305 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D MCI_00210 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D MCI_02495 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:rmo00460] D MCI_02720 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D MCI_02980 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:rmo00470] D MCI_04845 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D MCI_05875 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D MCI_07015 murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D MCI_07110 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] C 00480 Glutathione metabolism [PATH:rmo00480] D MCI_05125 multifunctional aminopeptidase A K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D MCI_00495 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D MCI_05965 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation C 00540 Lipopolysaccharide biosynthesis [PATH:rmo00540] D MCI_04185 UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D MCI_05905 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D MCI_04195 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D MCI_02840 hypothetical protein K09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D MCI_06400 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D MCI_02755 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D MCI_00405 kpsF protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D MCI_04645 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D MCI_06815 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D MCI_04790 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D MCI_02750 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] C 00542 O-Antigen repeat unit biosynthesis C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:rmo00541] D MCI_06495 putative nucleoside-diphosphate sugar epimerase capD K17716 capD; UDP-glucose 4-epimerase [EC:5.1.3.2] D MCI_03300 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D MCI_06490 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D MCI_00385 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D MCI_06500 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] C 00550 Peptidoglycan biosynthesis [PATH:rmo00550] D MCI_01620 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D MCI_05870 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D MCI_05865 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D MCI_07015 murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D MCI_01765 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D MCI_05875 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D MCI_01760 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D MCI_00065 undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D MCI_01755 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D MCI_07025 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D MCI_03475 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D MCI_05475 bifunctional penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28] D MCI_01490 penicillin-binding protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D MCI_01500 penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D MCI_06890 Penicillin-binding protein dacF precursor K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] C 00552 Teichoic acid biosynthesis C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:rmo00730] D MCI_01155 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D MCI_01160 NifS-like protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D MCI_02135 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism D MCI_01240 aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00750 Vitamin B6 metabolism C 00760 Nicotinate and nicotinamide metabolism [PATH:rmo00760] D MCI_00175 ppnK; inorganic polyphosphate/ATP-NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] D MCI_03935 NAD(P) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D MCI_03940 NAD(P) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D MCI_04725 NAD(p) transhydrogenase subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1] D MCI_00220 succinate semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00770 Pantothenate and CoA biosynthesis [PATH:rmo00770] D MCI_02845 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D MCI_01610 acpS; 4'-phosphopantetheinyl transferase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D MCI_00080 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] C 00780 Biotin metabolism [PATH:rmo00780] D MCI_03170 3-oxoacyl-(acyl carrier protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D MCI_03160 fabG; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D MCI_04190 fabZ; (3R)-hydroxymyristoyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D MCI_06690 enoyl-(acyl carrier protein) reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D MCI_00525 biotin--protein ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:rmo00785] D MCI_04075 lipoate-protein ligase B K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181] D MCI_02975 lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8] D MCI_03450 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D MCI_00970 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D MCI_05940 pyruvate dehydrogenase e1 component, alpha subunit precursor K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D MCI_05945 pyruvate dehydrogenase subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D MCI_00630 branched-chain alpha-keto acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D MCI_05375 sucA; 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D MCI_05370 dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] C 00790 Folate biosynthesis [PATH:rmo00790] D MCI_06835 folE; GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16] D MCI_04350 folate synthesis bifunctional protein K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D MCI_04355 folate synthesis bifunctional protein K13941 folKP; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase / dihydropteroate synthase [EC:2.7.6.3 2.5.1.15] D MCI_04345 Dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D MCI_00510 folylpolyglutamate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D MCI_05365 6-carboxy-5,6,7,8-tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D MCI_01865 organic radical activating protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D MCI_02625 trans-regulatory protein exsB K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D MCI_04715 queF; 7-cyano-7-deazaguanine reductase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] C 00670 One carbon pool by folate [PATH:rmo00670] D MCI_04345 Dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D MCI_00300 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D MCI_02980 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D MCI_05590 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D MCI_06210 thyX; FAD-dependent thymidylate synthase K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] D MCI_00975 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:rmo00860] D MCI_03790 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37] D MCI_02010 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D MCI_06445 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D MCI_01225 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D MCI_01035 hemC; porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D MCI_04150 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] D MCI_04130 coproporphyrinogen III oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3] D MCI_04140 hypothetical protein K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-] D MCI_04145 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] D MCI_06555 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D MCI_05920 cytochrome c oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:rmo00130] D MCI_02510 ubiA; 4-hydroxybenzoate polyprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D MCI_03610 3-polyprenyl-4-hydroxybenzoate decarboxylase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98] D MCI_01240 aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D MCI_02005 bifunctional 3-demethylubiquinone-9 3-methyltransferase/2-octaprenyl-6-hydroxy phenol methylase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64] D MCI_01465 2-octaprenyl-6-methoxyphenyl hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-] D MCI_02415 ubiE; ubiquinone/menaquinone biosynthesis methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D MCI_05435 ubiquinone biosynthesis protein coq7 K06134 COQ7; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60] D MCI_01740 tryptophan repressor binding protein K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:rmo00900] D MCI_02925 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MCI_01240 aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D MCI_00875 isopentenyl pyrophosphate isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2] D MCI_01120 octaprenyl-diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D MCI_00065 undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation C 00907 Pinene, camphor and geraniol degradation C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis D MCI_06490 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides C 01055 Biosynthesis of vancomycin group antibiotics B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids [PATH:rmo00946] D MCI_02720 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis C 00332 Carbapenem biosynthesis C 00261 Monobactam biosynthesis [PATH:rmo00261] D MCI_03060 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D MCI_06340 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D MCI_00085 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D MCI_05155 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:rmo00521] D MCI_05810 extragenic suppressor protein suhB K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D MCI_06490 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 00524 Neomycin, kanamycin and gentamicin biosynthesis C 00525 Acarbose and validamycin biosynthesis C 00401 Novobiocin biosynthesis D MCI_04800 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis C 00333 Prodigiosin biosynthesis D MCI_02875 acyl-carrier-protein S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D MCI_03160 fabG; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D MCI_06690 enoyl-(acyl carrier protein) reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D MCI_03165 acpP; acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites D MCI_02720 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:rmo00362] D MCI_05500 ferredoxin K04755 fdx; ferredoxin, 2Fe-2S D MCI_02925 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00627 Aminobenzoate degradation D MCI_01240 aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00364 Fluorobenzoate degradation C 00625 Chloroalkane and chloroalkene degradation C 00361 Chlorocyclohexane and chlorobenzene degradation C 00623 Toluene degradation C 00622 Xylene degradation C 00633 Nitrotoluene degradation C 00642 Ethylbenzene degradation C 00643 Styrene degradation C 00791 Atrazine degradation C 00930 Caprolactam degradation C 00363 Bisphenol degradation C 00621 Dioxin degradation C 00626 Naphthalene degradation C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:rmo03020] D MCI_05110 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D MCI_05115 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D MCI_02120 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D MCI_01615 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:rmo03010] D MCI_00830 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D MCI_04775 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D MCI_02210 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D MCI_06550 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D MCI_02155 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D MCI_04495 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D MCI_05070 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D MCI_02170 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D MCI_05780 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D MCI_02245 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D MCI_02125 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D MCI_05065 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D MCI_02130 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D MCI_02175 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D MCI_00415 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D MCI_04085 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D MCI_02195 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D MCI_04500 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D MCI_02220 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D MCI_02110 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D MCI_01915 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D MCI_05095 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D MCI_02225 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D MCI_02240 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D MCI_02235 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D MCI_02180 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D MCI_02165 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D MCI_05105 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D MCI_04505 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D MCI_05100 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D MCI_05090 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D MCI_05775 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D MCI_02190 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D MCI_02145 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D MCI_02205 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D MCI_02115 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D MCI_02160 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D MCI_04960 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D MCI_01875 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D MCI_03050 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D MCI_02215 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D MCI_02230 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D MCI_02185 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D MCI_01850 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25 D MCI_03055 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D MCI_04880 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D MCI_02200 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D MCI_02150 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D MCI_04885 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D MCI_03235 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D MCI_04090 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D MCI_01880 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D MCI_01870 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D MCI_00915 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D MCI_r07190 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D MCI_r07192 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D MCI_r07188 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:rmo00970] D MCI_t07126 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D MCI_t07138 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D MCI_t07136 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D MCI_t07132 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D MCI_t07160 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D MCI_t07180 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D MCI_t07122 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D MCI_t07182 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D MCI_t07134 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D MCI_t07168 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D MCI_t07142 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D MCI_t07146 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D MCI_t07152 tRNA-His K14226 tRNA-His; tRNA His D MCI_t07186 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D MCI_t07140 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D MCI_t07150 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D MCI_t07162 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D MCI_t07184 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D MCI_t07178 tRNA-Met K14230 tRNA-Met; tRNA Met D MCI_t07156 tRNA-Met K14230 tRNA-Met; tRNA Met D MCI_t07172 tRNA-Met K14230 tRNA-Met; tRNA Met D MCI_t07166 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D MCI_t07158 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D MCI_t07128 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D MCI_t07154 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D MCI_t07130 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D MCI_t07176 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D MCI_t07164 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D MCI_t07170 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D MCI_t07174 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D MCI_t07148 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D MCI_t07144 tRNA-Val K14237 tRNA-Val; tRNA Val D MCI_t07124 tRNA-Val K14237 tRNA-Val; tRNA Val D MCI_02010 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D MCI_06445 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D MCI_05175 gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D MCI_05170 gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D MCI_05180 gatC; aspartyl/glutamyl-tRNA amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D MCI_03905 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D MCI_05140 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D MCI_03865 glyQ; glycyl-tRNA synthetase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D MCI_03860 glyS; glycyl-tRNA synthetase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D MCI_05680 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D MCI_03320 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D MCI_04770 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D MCI_02495 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D MCI_05590 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D MCI_02525 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D MCI_00035 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D MCI_01935 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D MCI_06750 lysK; lysyl-tRNA synthetase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6] D MCI_04675 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D MCI_06840 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D MCI_06245 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D MCI_00010 pheS; phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D MCI_00015 pheT; phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D MCI_01340 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D MCI_01050 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:rmo03060] D MCI_02140 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D MCI_05080 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D MCI_04755 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D MCI_01680 secD; preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D MCI_04970 secF; preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D MCI_01675 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D MCI_04555 membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase D MCI_01600 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D MCI_04705 preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB D MCI_05290 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D MCI_03245 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D MCI_03040 tatA; twin arginine translocase protein A K03116 tatA; sec-independent protein translocase protein TatA D MCI_03315 Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC D MCI_04980 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D MCI_07005 lspA; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:rmo04122] D MCI_01155 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D MCI_01160 NifS-like protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D MCI_06235 mnmA; tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] C 03050 Proteasome C 03018 RNA degradation [PATH:rmo03018] D MCI_05795 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D MCI_05915 ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] D MCI_00410 polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D MCI_02305 ATP-dependent RNA helicase RhlE K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D MCI_00650 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D MCI_00180 hypothetical protein K12574 rnj; ribonuclease J [EC:3.1.-.-] D MCI_05405 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D MCI_02030 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D MCI_04240 poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:rmo03030] D MCI_02850 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D MCI_03295 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D MCI_03950 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D MCI_05285 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D MCI_05430 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D MCI_04025 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D MCI_00020 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D MCI_01245 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D MCI_03920 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D MCI_03755 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D MCI_02830 rnhA; ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D MCI_05515 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D MCI_02770 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:rmo03410] D MCI_02995 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D MCI_06610 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] D MCI_02420 formamidopyrimidine/5-formyluracil/5-hydroxymethyluracil DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D MCI_03820 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D MCI_02355 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D MCI_05935 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D MCI_00640 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D MCI_02770 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:rmo03420] D MCI_01770 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D MCI_03750 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D MCI_05520 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D MCI_01545 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D MCI_00235 DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D MCI_02770 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03430 Mismatch repair [PATH:rmo03430] D MCI_06185 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D MCI_04095 mutL; DNA mismatch repair protein K03572 mutL; DNA mismatch repair protein MutL D MCI_00235 DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D MCI_02340 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D MCI_06595 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D MCI_00640 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D MCI_03755 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D MCI_03295 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D MCI_00020 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D MCI_03950 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D MCI_05430 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D MCI_05285 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D MCI_02850 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D MCI_04025 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D MCI_02770 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D MCI_00800 site-specific DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] C 03440 Homologous recombination [PATH:rmo03440] D MCI_00640 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D MCI_03755 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D MCI_04340 recF; recombination protein F K03629 recF; DNA replication and repair protein RecF D MCI_01290 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D MCI_00150 recR; recombination protein RecR K06187 recR; recombination protein RecR D MCI_03155 recA; recombinase A K03553 recA; recombination protein RecA D MCI_06855 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D MCI_06875 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D MCI_04995 ruvC; Holliday junction resolvase K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D MCI_01715 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D MCI_03295 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D MCI_00020 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D MCI_03950 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D MCI_05430 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D MCI_05285 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D MCI_02850 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D MCI_04025 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D MCI_01235 primosome assembly protein PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:rmo02010] D MCI_04825 hypothetical protein K07323 mlaC; phospholipid transport system substrate-binding protein D MCI_02820 ABC transporter substrate binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D MCI_04850 ABC transporter permease protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D MCI_04855 ribonucleotide ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D MCI_04235 zinc/manganese ABC transporter substrate binding protein K09815 znuA; zinc transport system substrate-binding protein D MCI_02000 Zinc/manganese ABC transporter permease protein K09816 znuB; zinc transport system permease protein D MCI_03725 zinc ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D MCI_00505 BioY family protein K03523 bioY; biotin transport system substrate-specific component D MCI_04170 O-antigen export system permease protein RfbA K09690 wzm; homopolymeric O-antigen transport system permease protein D MCI_04165 O-antigen export system ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14] D MCI_02655 lipoprotein releasing system, transmembrane protein K09808 lolC_E; lipoprotein-releasing system permease protein D MCI_02660 lipoprotein releasing system ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D MCI_03700 Heme exporter protein C K02195 ccmC; heme exporter protein C D MCI_05980 heme exporter protein B K02194 ccmB; heme exporter protein B D MCI_03390 cytochrome c biogenesis protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D MCI_04020 hypothetical protein K07091 lptF; lipopolysaccharide export system permease protein D MCI_03215 putative permease K11720 lptG; lipopolysaccharide export system permease protein D MCI_00390 ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D MCI_06880 multidrug resistance protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D MCI_06335 Alkaline protease secretion ATP-binding protein AprD K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase C 02060 Phosphotransferase system (PTS) C 03070 Bacterial secretion system [PATH:rmo03070] D MCI_05730 outer membrane protein tolC precursor K12340 tolC; outer membrane protein D MCI_01680 secD; preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D MCI_04970 secF; preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D MCI_05080 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D MCI_04755 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D MCI_02140 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D MCI_01675 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D MCI_04555 membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase D MCI_01600 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D MCI_03245 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D MCI_04705 preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB D MCI_05290 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D MCI_03040 tatA; twin arginine translocase protein A K03116 tatA; sec-independent protein translocase protein TatA D MCI_03315 Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC D MCI_04900 type IV secretion system protein VirB3 K03198 virB3; type IV secretion system protein VirB3 D MCI_06120 VirB9 K03204 virB9; type IV secretion system protein VirB9 D MCI_06140 VirB9 K03204 virB9; type IV secretion system protein VirB9 D MCI_04910 VirB6 K03201 virB6; type IV secretion system protein VirB6 D MCI_04915 trbL/virB6 plasmid Conjugative transfer protein K03201 virB6; type IV secretion system protein VirB6 D MCI_04920 trbL/virB6 plasmid Conjugative transfer protein K03201 virB6; type IV secretion system protein VirB6 D MCI_04925 channel protein K03201 virB6; type IV secretion system protein VirB6 D MCI_04930 hypothetical protein K03201 virB6; type IV secretion system protein VirB6 D MCI_06125 channel protein K03203 virB8; type IV secretion system protein VirB8 D MCI_06135 hypothetical protein K03203 virB8; type IV secretion system protein VirB8 D MCI_06145 VirB10 K03195 virB10; type IV secretion system protein VirB10 D MCI_03330 VirB4 K03199 virB4; type IV secretion system protein VirB4 [EC:7.4.2.8] D MCI_04905 type IV secretion system ATPase VirB4 K03199 virB4; type IV secretion system protein VirB4 [EC:7.4.2.8] D MCI_06150 type IV secretion system ATPase VirB11 K03196 virB11; type IV secretion system protein VirB11 [EC:7.4.2.8] D MCI_06155 type IV secretion system component VirD4 K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8] B B 09132 Signal transduction C 02020 Two-component system [PATH:rmo02020] D MCI_00070 osmolarity sensor protein EnvZ K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D MCI_00075 transcriptional regulatory protein K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR D MCI_05035 endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107] D MCI_05920 cytochrome c oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9] D MCI_01785 dnaA; chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein D MCI_00320 hypothetical protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D MCI_00325 hypothetical protein K07346 fimC; fimbrial chaperone protein D MCI_00445 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D MCI_01910 nitrogen regulation protein NtrY K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D MCI_01475 nitrogen assimilation regulatory protein NtrX K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX D MCI_02925 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MCI_05755 histidine kinase sensor protein K07716 pleC; two-component system, cell cycle sensor histidine kinase PleC [EC:2.7.13.3] D MCI_05800 pleD; response regulator PleD K02488 pleD; two-component system, cell cycle response regulator [EC:2.7.7.65] D MCI_04710 transcriptional activator protein CzcR K13584 ctrA; two-component system, cell cycle response regulator CtrA D MCI_05990 Ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D MCI_05995 cytochrome b K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D MCI_06005 cytochrome c1, heme protein precursor K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D MCI_05895 cytochrome c K08738 CYC; cytochrome c D MCI_05640 cytochrome d ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D MCI_05645 cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D MCI_05730 outer membrane protein tolC precursor K12340 tolC; outer membrane protein D MCI_06500 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis D MCI_05990 Ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:rmo02024] D MCI_04555 membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase D MCI_05080 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D MCI_04755 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D MCI_02140 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D MCI_01675 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D MCI_01600 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D MCI_03245 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D MCI_04705 preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB D MCI_05290 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis C 02040 Flagellar assembly D MCI_03915 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:rmo01501] D MCI_01095 AmpG protein K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D MCI_06885 ampG protein K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D MCI_05730 outer membrane protein tolC precursor K12340 tolC; outer membrane protein D MCI_03475 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D MCI_01490 penicillin-binding protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D MCI_01500 penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:rmo01502] D MCI_05875 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D MCI_04845 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D MCI_01760 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D MCI_01755 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D MCI_07025 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:rmo01503] D MCI_05035 endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107] D MCI_05730 outer membrane protein tolC precursor K12340 tolC; outer membrane protein D MCI_04185 UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:rmo01000] C 01001 Protein kinases [BR:rmo01001] D MCI_00070 osmolarity sensor protein EnvZ K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D MCI_01910 nitrogen regulation protein NtrY K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D MCI_05755 histidine kinase sensor protein K07716 pleC; two-component system, cell cycle sensor histidine kinase PleC [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:rmo01009] D MCI_03785 heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG C 01002 Peptidases and inhibitors [BR:rmo01002] D MCI_07005 lspA; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] D MCI_06975 putative glutamine amidotransferase K07010 K07010; putative glutamine amidotransferase D MCI_05125 multifunctional aminopeptidase A K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D MCI_04035 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D MCI_03660 methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D MCI_01125 aminopeptidase P K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D MCI_05380 thermostable carboxypeptidase K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19] D MCI_04515 cell division protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D MCI_05230 M50 family membrane endopeptidase K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D MCI_05035 endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107] D MCI_06085 protease II K01354 ptrB; oligopeptidase B [EC:3.4.21.83] D MCI_06890 Penicillin-binding protein dacF precursor K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D MCI_00835 clpP; ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D MCI_00260 ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D MCI_04980 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D MCI_05750 carboxyl-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D MCI_00655 signal peptide peptidase SppA K04773 sppA; protease IV [EC:3.4.21.-] D MCI_06960 microcin C7 self-immunity protein K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13] D MCI_06360 ATP-dependent protease subunit HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] D MCI_02290 ecotin K08276 eco; ecotin D MCI_01420 large extracellular alpha-helical protein K06894 yfhM; alpha-2-macroglobulin D MCI_05030 Membrane protease subunit, stomatin/prohibitin-like protein K04087 hflC; modulator of FtsH protease HflC D MCI_05025 Protease activity modulator HflK K04088 hflK; modulator of FtsH protease HflK C 01003 Glycosyltransferases [BR:rmo01003] D MCI_05475 bifunctional penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28] D MCI_03475 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] C 01005 Lipopolysaccharide biosynthesis proteins [BR:rmo01005] D MCI_04185 UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D MCI_06400 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D MCI_05905 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D MCI_04195 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D MCI_02840 hypothetical protein K09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D MCI_02755 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D MCI_02750 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D MCI_04790 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D MCI_04645 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D MCI_06815 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D MCI_00405 kpsF protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:rmo01011] D MCI_01620 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D MCI_05870 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D MCI_05865 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D MCI_07015 murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D MCI_01765 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D MCI_05875 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D MCI_04845 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D MCI_06960 microcin C7 self-immunity protein K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13] D MCI_01755 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D MCI_07025 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D MCI_01700 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase D MCI_03475 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D MCI_05475 bifunctional penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28] D MCI_01490 penicillin-binding protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D MCI_01500 penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D MCI_06890 Penicillin-binding protein dacF precursor K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D MCI_06945 soluble lytic murein transglycosylase precursor K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D MCI_06410 Aminodeoxychorismate lyase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D MCI_06895 rare lipoprotein A precursor K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D MCI_04080 N-acetylmuramoyl-L-alanine amidase K11066 amiD; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] C 01004 Lipid biosynthesis proteins [BR:rmo01004] D MCI_02875 acyl-carrier-protein S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D MCI_03230 3-oxoacyl-(acyl carrier protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D MCI_03170 3-oxoacyl-(acyl carrier protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D MCI_03160 fabG; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D MCI_04190 fabZ; (3R)-hydroxymyristoyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D MCI_06690 enoyl-(acyl carrier protein) reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D MCI_04480 Acyl-CoA desaturase 1 K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1] D MCI_01055 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins C 01006 Prenyltransferases [BR:rmo01006] D MCI_01120 octaprenyl-diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D MCI_00065 undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D MCI_00375 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D MCI_02510 ubiA; 4-hydroxybenzoate polyprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D MCI_06555 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] C 01007 Amino acid related enzymes [BR:rmo01007] D MCI_06750 lysK; lysyl-tRNA synthetase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6] D MCI_02010 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D MCI_06445 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D MCI_01340 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D MCI_01050 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D MCI_04770 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D MCI_04675 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D MCI_02495 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D MCI_01935 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D MCI_02525 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D MCI_00035 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D MCI_05140 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D MCI_06245 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D MCI_03865 glyQ; glycyl-tRNA synthetase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D MCI_03860 glyS; glycyl-tRNA synthetase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D MCI_03320 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D MCI_06840 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D MCI_05680 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D MCI_03905 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D MCI_00010 pheS; phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D MCI_00015 pheT; phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D MCI_04800 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D MCI_03790 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37] D MCI_00080 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:rmo00194] D MCI_03425 atpC; F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D MCI_03430 F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D MCI_03435 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D MCI_03440 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D MCI_03445 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D MCI_04290 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D MCI_04295 F0F1 ATP synthase subunit B' K02109 ATPF0B; F-type H+-transporting ATPase subunit b D MCI_04300 F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D MCI_04310 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D MCI_04315 hypothetical protein K02116 atpI; ATP synthase protein I B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:rmo03000] D MCI_01165 Rrf2 family protein K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor D MCI_01330 Putative transcriptional regulator K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor D MCI_00525 biotin--protein ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D MCI_01665 putative antitoxin of toxin-antitoxin K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB D MCI_05855 hypothetical protein K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator D MCI_04630 stage 0 sporulation protein J K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D MCI_04325 transcriptional regulator K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription D MCI_04380 hypothetical protein K07735 algH; putative transcriptional regulator D MCI_03570 DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor D MCI_01515 cell division protein MraZ K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:rmo03021] D MCI_02120 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D MCI_05110 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D MCI_05115 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D MCI_01615 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D MCI_03915 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D MCI_06220 RNA polymerase factor sigma-32 K03089 rpoH; RNA polymerase sigma-32 factor D MCI_01315 nusA; transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA D MCI_05235 nusB; transcription antitermination protein NusB K03625 nusB; transcription antitermination protein NusB D MCI_05085 nusG; transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D MCI_03570 DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor D MCI_03930 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D MCI_00650 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:rmo03019] D MCI_05915 ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] D MCI_04985 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D MCI_00180 hypothetical protein K12574 rnj; ribonuclease J [EC:3.1.-.-] D MCI_02305 ATP-dependent RNA helicase RhlE K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D MCI_00410 polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D MCI_00650 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D MCI_05405 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D MCI_02030 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D MCI_04240 poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D MCI_05795 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] C 03041 Spliceosome C 03011 Ribosome [BR:rmo03011] D MCI_00830 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D MCI_04775 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D MCI_02210 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D MCI_06550 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D MCI_02155 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D MCI_04495 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D MCI_05070 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D MCI_02170 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D MCI_05780 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D MCI_02245 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D MCI_02125 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D MCI_05065 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D MCI_02130 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D MCI_02175 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D MCI_00415 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D MCI_04085 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D MCI_02195 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D MCI_04500 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D MCI_02220 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D MCI_02110 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D MCI_01915 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D MCI_05095 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D MCI_02225 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D MCI_02240 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D MCI_02235 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D MCI_02180 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D MCI_02165 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D MCI_04505 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D MCI_05100 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D MCI_05090 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D MCI_05105 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D MCI_05775 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D MCI_02190 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D MCI_02145 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D MCI_02205 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D MCI_02115 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D MCI_02160 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D MCI_04960 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D MCI_01875 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D MCI_03050 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D MCI_02215 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D MCI_02230 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D MCI_02185 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D MCI_03055 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D MCI_04880 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D MCI_02200 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D MCI_02150 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D MCI_04885 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D MCI_03235 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D MCI_04090 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D MCI_01880 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D MCI_01870 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D MCI_00915 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D MCI_01850 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25 D MCI_r07188 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D MCI_r07190 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D MCI_r07192 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:rmo03009] D MCI_04985 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D MCI_04990 era; GTPase Era K03595 era; GTPase D MCI_03805 obgE; GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-] D MCI_03570 DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor D MCI_01315 nusA; transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA D MCI_05235 nusB; transcription antitermination protein NusB K03625 nusB; transcription antitermination protein NusB D MCI_05085 nusG; transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D MCI_02320 ksgA; 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D MCI_01275 N6-adenine-specific methylase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D MCI_05265 16S ribosomal RNA methyltransferase RsmE K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D MCI_04620 gidB; 16S rRNA methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D MCI_01510 16S rRNA m(4)C1402 methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D MCI_03030 Putative methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D MCI_01335 Hemolysin A K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D MCI_02255 tRNA/rRNA methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D MCI_05240 ribosomal RNA large subunit methyltransferase J K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] D MCI_02765 protein involved in external DNA uptake K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266] D MCI_01265 ribosomal large subunit pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D MCI_05925 ribosomal large subunit pseudouridine synthase C K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D MCI_03825 ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D MCI_06585 rimM; 16S rRNA-processing protein RimM K02860 rimM; 16S rRNA processing protein RimM D MCI_05915 ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] D MCI_06480 Holliday junction resolvase-like protein K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D MCI_02305 ATP-dependent RNA helicase RhlE K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D MCI_02365 GTP-binding protein Der K03977 engA; GTPase D MCI_03855 Sua5/YciO/YrdC/YwlC family putative translation factor protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D MCI_00135 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A D MCI_01320 ribosome maturation protein RimP K09748 rimP; ribosome maturation factor RimP D MCI_03510 Iojap-related protein K09710 ybeB; ribosome-associated protein D MCI_02960 metal-binding heat shock protein K07042 ybeY; probable rRNA maturation factor D MCI_01830 GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase C 03016 Transfer RNA biogenesis [BR:rmo03016] D MCI_02010 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D MCI_06445 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D MCI_06840 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D MCI_01935 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D MCI_00035 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D MCI_02495 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D MCI_04675 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D MCI_05140 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D MCI_03905 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D MCI_05680 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D MCI_03320 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D MCI_04770 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D MCI_02525 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D MCI_06245 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D MCI_00010 pheS; phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D MCI_00015 pheT; phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D MCI_01340 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D MCI_01050 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D MCI_06345 protein kinase C inhibitor 1 K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D MCI_03910 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D MCI_00420 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D MCI_01155 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D MCI_01160 NifS-like protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D MCI_03855 Sua5/YciO/YrdC/YwlC family putative translation factor protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D MCI_00375 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D MCI_03120 trmE; tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D MCI_04615 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D MCI_06180 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D MCI_01885 rnpA; ribonuclease P K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D MCI_02070 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56] D MCI_00050 ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5] D MCI_00980 ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5] D MCI_04635 putative ABC transporter ATP-binding protein K06020 ettA; energy-dependent translational throttle protein EttA D MCI_06750 lysK; lysyl-tRNA synthetase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6] D MCI_03865 glyQ; glycyl-tRNA synthetase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D MCI_03860 glyS; glycyl-tRNA synthetase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D MCI_03705 cytosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D MCI_04215 nifR3-like protein K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D MCI_03480 (dimethylallyl)adenosine tRNA methylthiotransferase K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D MCI_00005 miaB-like tRNA modifying protein K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5] D MCI_05000 tRNA/rRNA methyltransferase K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-] D MCI_04955 trmD; tRNA (guanine-N(1)-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D MCI_06235 mnmA; tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D MCI_01145 iron-sulfur cluster assembly accessory protein K13628 iscA; iron-sulfur cluster assembly protein D MCI_00990 putative aminomethyltransferase K06980 ygfZ; tRNA-modifying protein YgfZ D MCI_05615 S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D MCI_02625 trans-regulatory protein exsB K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D MCI_05365 6-carboxy-5,6,7,8-tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D MCI_01865 organic radical activating protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D MCI_04715 queF; 7-cyano-7-deazaguanine reductase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D MCI_03880 hypothetical protein K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6] D MCI_02780 tgt; queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D MCI_04510 tRNA(Ile)-lysidine synthase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D MCI_01300 glycoprotease family protein K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D MCI_04475 UGMP family protein K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D MCI_04230 Putative P-loop hydrolase K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D MCI_00410 polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:rmo03012] D MCI_01310 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D MCI_00625 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D MCI_04780 tsf; elongation factor Ts K02357 tsf; elongation factor Ts D MCI_02250 elongation factor Tu K02358 tuf; elongation factor Tu D MCI_05075 elongation factor G K02355 fusA; elongation factor G D MCI_00635 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D MCI_05190 frr; ribosome recycling factor K02838 frr; ribosome recycling factor D MCI_03850 bifunctional N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase/tRNA (m7G46) methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D MCI_01845 peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D MCI_03560 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D MCI_05805 elongation factor P K02356 efp; elongation factor P D MCI_06030 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2 C 03110 Chaperones and folding catalysts [BR:rmo03110] D MCI_04465 chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D MCI_02615 clpX; ATP-dependent protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D MCI_06365 hslU; ATP-dependent protease ATP-binding subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU D MCI_03785 heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG D MCI_05405 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D MCI_05505 hscA; chaperone protein HscA K04044 hscA; molecular chaperone HscA D MCI_02030 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D MCI_05400 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D MCI_05510 hscB; co-chaperone HscB K04082 hscB; molecular chaperone HscB D MCI_02075 heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE D MCI_02035 groES; co-chaperonin GroES K04078 groES; chaperonin GroES D MCI_05035 endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107] D MCI_04515 cell division protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D MCI_04310 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D MCI_00325 hypothetical protein K07346 fimC; fimbrial chaperone protein D MCI_04705 preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB D MCI_01550 copper(I)-binding protein K09796 pccA; periplasmic copper chaperone A D MCI_04160 thioredoxin K03671 TXN; thioredoxin D MCI_05525 glutaredoxin 3 K03676 grxC; glutaredoxin 3 D MCI_02990 glutaredoxin-like protein grla K07390 grxD; monothiol glutaredoxin C 04131 Membrane trafficking [BR:rmo04131] D MCI_04610 ndk; mulitfunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-phosphodiesterase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D MCI_03785 heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG C 04121 Ubiquitin system C 03051 Proteasome [BR:rmo03051] D MCI_03785 heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG C 03032 DNA replication proteins [BR:rmo03032] D MCI_02830 rnhA; ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D MCI_05280 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta D MCI_02730 Integration host factor alpha-subunit K04764 ihfA; integration host factor subunit alpha D MCI_00660 integration host factor beta-subunit K05788 ihfB; integration host factor subunit beta D MCI_01785 dnaA; chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein D MCI_01245 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D MCI_03920 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D MCI_03755 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D MCI_03295 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D MCI_00020 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D MCI_04025 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D MCI_05430 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D MCI_05285 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D MCI_02850 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D MCI_03950 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D MCI_05515 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D MCI_02770 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D MCI_00800 site-specific DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D MCI_05550 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D MCI_01625 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D MCI_04685 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D MCI_05745 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D MCI_06450 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:rmo03036] D MCI_04985 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D MCI_05280 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta D MCI_02730 Integration host factor alpha-subunit K04764 ihfA; integration host factor subunit alpha D MCI_00660 integration host factor beta-subunit K05788 ihfB; integration host factor subunit beta D MCI_01785 dnaA; chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein D MCI_05885 cell division protein FtsA K03590 ftsA; cell division protein FtsA D MCI_01500 penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D MCI_03645 cell division protein FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D MCI_01505 cell division protein FtsL K03586 ftsL; cell division protein FtsL D MCI_05880 cell division protein ftsQ K03589 ftsQ; cell division protein FtsQ D MCI_07020 cell division protein FtsW K03588 ftsW; cell division protein FtsW D MCI_02280 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D MCI_05610 ATPase n2B K06916 zapE; cell division protein ZapE D MCI_03210 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D MCI_03205 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC D MCI_06080 rod shape-determining protein rodA K05837 rodA; rod shape determining protein RodA D MCI_05130 Chromosome partitioning protein-like protein K03496 parA; chromosome partitioning protein D MCI_04625 chromosome partitioning ATPase K03496 parA; chromosome partitioning protein D MCI_04630 stage 0 sporulation protein J K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D MCI_04685 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D MCI_05745 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D MCI_04615 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D MCI_04620 gidB; 16S rRNA methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D MCI_03575 xerC; site-specific tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC D MCI_06670 xerD; site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD D MCI_05020 hypothetical protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D MCI_06845 cell filamentation protein Fic K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D MCI_04890 engB; GTP-binding protein YsxC K03978 engB; GTP-binding protein C 03400 DNA repair and recombination proteins [BR:rmo03400] D MCI_06610 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] D MCI_02995 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D MCI_06825 ADP-ribose pyrophosphatase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D MCI_06940 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D MCI_03820 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D MCI_02420 formamidopyrimidine/5-formyluracil/5-hydroxymethyluracil DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D MCI_02355 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D MCI_05935 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D MCI_00640 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D MCI_02770 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D MCI_03750 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D MCI_05520 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D MCI_01545 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D MCI_00235 DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D MCI_05110 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D MCI_05115 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D MCI_02120 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D MCI_01615 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D MCI_01770 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D MCI_06185 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D MCI_04095 mutL; DNA mismatch repair protein K03572 mutL; DNA mismatch repair protein MutL D MCI_02340 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D MCI_06595 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D MCI_03295 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D MCI_00020 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D MCI_04025 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D MCI_05430 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D MCI_05285 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D MCI_02850 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D MCI_03950 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D MCI_03755 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D MCI_00800 site-specific DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D MCI_03155 recA; recombinase A K03553 recA; recombination protein RecA D MCI_06855 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D MCI_06875 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D MCI_04995 ruvC; Holliday junction resolvase K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D MCI_01235 primosome assembly protein PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D MCI_01280 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms D MCI_04340 recF; recombination protein F K03629 recF; DNA replication and repair protein RecF D MCI_01715 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D MCI_01290 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D MCI_00150 recR; recombination protein RecR K06187 recR; recombination protein RecR D MCI_05385 DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D MCI_02860 ATP-dependent helicase K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-] D MCI_06965 hypothetical protein K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-] D MCI_05550 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D MCI_01625 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D MCI_06450 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D MCI_05280 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta D MCI_02730 Integration host factor alpha-subunit K04764 ihfA; integration host factor subunit alpha D MCI_00660 integration host factor beta-subunit K05788 ihfB; integration host factor subunit beta D MCI_00340 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D MCI_00350 nrdF; ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] C 03029 Mitochondrial biogenesis [BR:rmo03029] D MCI_05995 cytochrome b K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D MCI_01310 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D MCI_00625 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D MCI_04780 tsf; elongation factor Ts K02357 tsf; elongation factor Ts D MCI_02250 elongation factor Tu K02358 tuf; elongation factor Tu D MCI_05075 elongation factor G K02355 fusA; elongation factor G D MCI_04990 era; GTPase Era K03595 era; GTPase D MCI_01340 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D MCI_00035 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D MCI_05140 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D MCI_04675 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D MCI_05175 gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D MCI_05170 gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D MCI_05180 gatC; aspartyl/glutamyl-tRNA amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D MCI_03755 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D MCI_05225 outer membrane protein omp1 K07277 SAM50; outer membrane protein insertion porin family D MCI_05405 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D MCI_02075 heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE D MCI_02030 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D MCI_02035 groES; co-chaperonin GroES K04078 groES; chaperonin GroES D MCI_05400 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D MCI_01155 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D MCI_01160 NifS-like protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D MCI_01150 scaffold protein K22068 ISCU; iron-sulfur cluster assembly enzyme ISCU, mitochondrial D MCI_05510 hscB; co-chaperone HscB K04082 hscB; molecular chaperone HscB D MCI_02990 glutaredoxin-like protein grla K07390 grxD; monothiol glutaredoxin D MCI_02295 NifU-like protein K22074 NFU1; NFU1 iron-sulfur cluster scaffold homolog, mitochondrial D MCI_04540 hypothetical protein K18164 NDUFAF7; NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 7 D MCI_05020 hypothetical protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D MCI_06555 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D MCI_06225 cytochrome C oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11 D MCI_05920 cytochrome c oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9] D MCI_04555 membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase D MCI_02855 Surfeit locus protein 1 K14998 SURF1; surfeit locus 1 family protein D MCI_01685 Sco2 protein precursor K07152 SCO1; protein SCO1 D MCI_04375 sco2 protein K07152 SCO1; protein SCO1 D MCI_03785 heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:rmo02000] D MCI_06880 multidrug resistance protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D MCI_02640 putative lipid A export ATP-binding/permease protein MsbA K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D MCI_05630 multidrug ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D MCI_06335 Alkaline protease secretion ATP-binding protein AprD K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase D MCI_03175 ABC transporter ATP-binding protein uup K15738 uup; ABC transport system ATP-binding/permease protein D MCI_02820 ABC transporter substrate binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D MCI_04850 ABC transporter permease protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D MCI_04855 ribonucleotide ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D MCI_04825 hypothetical protein K07323 mlaC; phospholipid transport system substrate-binding protein D MCI_06715 ABC-type transport system, periplasmic component K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein D MCI_06720 ABC transporter permease protein K05832 K05832; putative tryptophan/tyrosine transport system permease protein D MCI_06725 ABC transporter ATP-binding protein K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein D MCI_05165 amino acid ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D MCI_05060 amino acid ABC transporter permease protein K02029 ABC.PA.P; polar amino acid transport system permease protein D MCI_03995 glutamine ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D MCI_04235 zinc/manganese ABC transporter substrate binding protein K09815 znuA; zinc transport system substrate-binding protein D MCI_02000 Zinc/manganese ABC transporter permease protein K09816 znuB; zinc transport system permease protein D MCI_03725 zinc ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D MCI_00505 BioY family protein K03523 bioY; biotin transport system substrate-specific component D MCI_04170 O-antigen export system permease protein RfbA K09690 wzm; homopolymeric O-antigen transport system permease protein D MCI_04165 O-antigen export system ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14] D MCI_04020 hypothetical protein K07091 lptF; lipopolysaccharide export system permease protein D MCI_03215 putative permease K11720 lptG; lipopolysaccharide export system permease protein D MCI_00390 ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D MCI_02655 lipoprotein releasing system, transmembrane protein K09808 lolC_E; lipoprotein-releasing system permease protein D MCI_02660 lipoprotein releasing system ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D MCI_03700 Heme exporter protein C K02195 ccmC; heme exporter protein C D MCI_05980 heme exporter protein B K02194 ccmB; heme exporter protein B D MCI_03390 cytochrome c biogenesis protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D MCI_04125 proline/betaine transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter D MCI_03885 proline/betaine transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter D MCI_06780 proline/betaine transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter D MCI_04605 Sugar phosphate permease K02445 glpT; MFS transporter, OPA family, glycerol-3-phosphate transporter D MCI_01095 AmpG protein K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D MCI_06885 ampG protein K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D MCI_02650 MFS-type bicyclomycin resistance protein K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D MCI_01815 bicyclomycin resistance protein K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D MCI_05205 multidrug resistance protein B K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein D MCI_00495 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D MCI_04550 hypothetical protein K16053 ybdG; miniconductance mechanosensitive channel D MCI_01635 magnesium transporter K06213 mgtE; magnesium transporter D MCI_06305 TolQ K03562 tolQ; biopolymer transport protein TolQ D MCI_06310 TolR K03560 tolR; biopolymer transport protein TolR D MCI_02670 magnesium and cobalt efflux protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D MCI_05730 outer membrane protein tolC precursor K12340 tolC; outer membrane protein D MCI_05225 outer membrane protein omp1 K07277 SAM50; outer membrane protein insertion porin family D MCI_05390 ComL family lipoprotein K05807 bamD; outer membrane protein assembly factor BamD D MCI_00395 hypothetical protein K09774 lptA; lipopolysaccharide export system protein LptA D MCI_00400 hypothetical protein K11719 lptC; lipopolysaccharide export system protein LptC D MCI_02330 organic solvent tolerance protein-like protein K04744 lptD; LPS-assembly protein D MCI_02955 hemolysin C K06189 corC; hemolysin (HlyC) family protein D MCI_03710 cation diffusion facilitator family transporter K13283 fieF; ferrous-iron efflux pump FieF D MCI_04735 S-adenosylmethionine transporter K15270 sam; S-adenosylmethionine uptake transporter D MCI_04065 Na+/H+ antiporter NhaA K03313 nhaA; Na+:H+ antiporter, NhaA family D MCI_03505 glutathione-regulated potassium-efflux system protein K03455 KEA1_2_3; K+:H+ antiporter D MCI_05975 putative monovalent cation/H+ antiporter subunit B K05566 mnhB; multicomponent Na+:H+ antiporter subunit B D MCI_06115 putative monovalent cation/H+ antiporter subunit C K05567 mnhC; multicomponent Na+:H+ antiporter subunit C D MCI_06090 putative monovalent cation/H+ antiporter subunit D K05568 mnhD; multicomponent Na+:H+ antiporter subunit D D MCI_06105 putative monovalent cation/H+ antiporter subunit D K05568 mnhD; multicomponent Na+:H+ antiporter subunit D D MCI_06110 putative monovalent cation/H+ antiporter subunit D K05568 mnhD; multicomponent Na+:H+ antiporter subunit D D MCI_05200 putative monovalent cation/H+ antiporter subunit E K05569 mnhE; multicomponent Na+:H+ antiporter subunit E D MCI_05970 putative monovalent cation/H+ antiporter subunit G K05571 mnhG; multicomponent Na+:H+ antiporter subunit G D MCI_01700 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase D MCI_06755 putative permease K13936 mdcF; malonate transporter and related proteins D MCI_00200 permease K24180 mleP; malate permease and related proteins D MCI_01090 lysine efflux permease K06895 lysE; L-lysine exporter family protein LysE/ArgO D MCI_04760 hypothetical protein K09125 yhhQ; queuosine precursor transporter D MCI_07020 cell division protein FtsW K03588 ftsW; cell division protein FtsW D MCI_06910 FTR1 family protein K07243 FTR; high-affinity iron transporter D MCI_02360 hypothetical protein K15383 K15383; MtN3 and saliva related transmembrane protein D MCI_03220 peptidoglycan-associated lipoprotein precursor K03640 pal; peptidoglycan-associated lipoprotein D MCI_06215 tolB; translocation protein TolB K03641 tolB; TolB protein D MCI_05830 multidrug resistance protein A K03543 emrA; membrane fusion protein, multidrug efflux system D MCI_06330 HlyD family type I secretion adaptor protein K12537 hasE; membrane fusion protein, type I secretion system D MCI_03020 hypothetical protein K16348 ecnB; entericidin B D MCI_02675 Cytochrome c-type biogenesis protein ccmF K02198 ccmF; cytochrome c-type biogenesis protein CcmF C 02044 Secretion system [BR:rmo02044] D MCI_05730 outer membrane protein tolC precursor K12340 tolC; outer membrane protein D MCI_06335 Alkaline protease secretion ATP-binding protein AprD K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase D MCI_06330 HlyD family type I secretion adaptor protein K12537 hasE; membrane fusion protein, type I secretion system D MCI_04900 type IV secretion system protein VirB3 K03198 virB3; type IV secretion system protein VirB3 D MCI_03330 VirB4 K03199 virB4; type IV secretion system protein VirB4 [EC:7.4.2.8] D MCI_04905 type IV secretion system ATPase VirB4 K03199 virB4; type IV secretion system protein VirB4 [EC:7.4.2.8] D MCI_04910 VirB6 K03201 virB6; type IV secretion system protein VirB6 D MCI_04915 trbL/virB6 plasmid Conjugative transfer protein K03201 virB6; type IV secretion system protein VirB6 D MCI_04920 trbL/virB6 plasmid Conjugative transfer protein K03201 virB6; type IV secretion system protein VirB6 D MCI_04925 channel protein K03201 virB6; type IV secretion system protein VirB6 D MCI_04930 hypothetical protein K03201 virB6; type IV secretion system protein VirB6 D MCI_06125 channel protein K03203 virB8; type IV secretion system protein VirB8 D MCI_06135 hypothetical protein K03203 virB8; type IV secretion system protein VirB8 D MCI_06120 VirB9 K03204 virB9; type IV secretion system protein VirB9 D MCI_06140 VirB9 K03204 virB9; type IV secretion system protein VirB9 D MCI_06145 VirB10 K03195 virB10; type IV secretion system protein VirB10 D MCI_06150 type IV secretion system ATPase VirB11 K03196 virB11; type IV secretion system protein VirB11 [EC:7.4.2.8] D MCI_06155 type IV secretion system component VirD4 K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8] D MCI_00750 conjugative transfer protein TraW K12061 traW; conjugal transfer pilus assembly protein TraW D MCI_00745 conjugative transfer protein TraC K12063 traC; conjugal transfer ATP-binding protein TraC D MCI_00735 F pilus assembly protein TraB K12065 traB; conjugal transfer pilus assembly protein TraB D MCI_00325 hypothetical protein K07346 fimC; fimbrial chaperone protein D MCI_00320 hypothetical protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D MCI_01600 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D MCI_04705 preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB D MCI_01680 secD; preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D MCI_05080 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D MCI_04970 secF; preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D MCI_04755 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D MCI_02140 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D MCI_05290 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D MCI_03245 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D MCI_01675 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D MCI_04555 membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase D MCI_03040 tatA; twin arginine translocase protein A K03116 tatA; sec-independent protein translocase protein TatA D MCI_03315 Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC C 02042 Bacterial toxins [BR:rmo02042] D MCI_02670 magnesium and cobalt efflux protein K03699 tlyC; magnesium and cobalt exporter, CNNM family C 02022 Two-component system [BR:rmo02022] D MCI_00070 osmolarity sensor protein EnvZ K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D MCI_00075 transcriptional regulatory protein K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR D MCI_01910 nitrogen regulation protein NtrY K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D MCI_01475 nitrogen assimilation regulatory protein NtrX K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX D MCI_05755 histidine kinase sensor protein K07716 pleC; two-component system, cell cycle sensor histidine kinase PleC [EC:2.7.13.3] D MCI_05800 pleD; response regulator PleD K02488 pleD; two-component system, cell cycle response regulator [EC:2.7.7.65] D MCI_04710 transcriptional activator protein CzcR K13584 ctrA; two-component system, cell cycle response regulator CtrA C 02035 Bacterial motility proteins [BR:rmo02035] D MCI_00325 hypothetical protein K07346 fimC; fimbrial chaperone protein D MCI_00320 hypothetical protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:rmo04812] D MCI_03210 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D MCI_02280 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D MCI_05885 cell division protein FtsA K03590 ftsA; cell division protein FtsA D MCI_05130 Chromosome partitioning protein-like protein K03496 parA; chromosome partitioning protein D MCI_04625 chromosome partitioning ATPase K03496 parA; chromosome partitioning protein D MCI_04630 stage 0 sporulation protein J K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:rmo04147] D MCI_03785 heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG D MCI_06460 thioredoxin peroxidase 1 K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24] D MCI_02030 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D MCI_05405 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D MCI_02250 elongation factor Tu K02358 tuf; elongation factor Tu D MCI_06345 protein kinase C inhibitor 1 K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D MCI_02925 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MCI_02135 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D MCI_00445 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D MCI_01225 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D MCI_03450 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D MCI_00970 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 02048 Prokaryotic defense system [BR:rmo02048] D MCI_00800 site-specific DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D MCI_01665 putative antitoxin of toxin-antitoxin K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB D MCI_04015 hypothetical protein K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-] D MCI_01065 hypothetical protein K07473 dinJ; DNA-damage-inducible protein J D MCI_04010 DNA-damage-inducible protein J K07473 dinJ; DNA-damage-inducible protein J D MCI_04805 putative toxin of toxin-antitoxin (TA) system K19158 yoeB; toxin YoeB [EC:3.1.-.-] D MCI_05655 putative toxin of toxin-antitoxin (TA) system StbD K19158 yoeB; toxin YoeB [EC:3.1.-.-] D MCI_04810 antitoxin of toxin-antitoxin K19159 yefM; antitoxin YefM D MCI_05650 antitoxin of toxin-antitoxin (TA) system StbD K19159 yefM; antitoxin YefM D MCI_04225 antitoxin of toxin-antitoxin system StbD K19165 phd; antitoxin Phd D MCI_03875 Putative antitoxin of toxin-antitoxin (TA) system K19165 phd; antitoxin Phd D MCI_06485 plasmid maintenance system antidote protein K21498 higA-1; antitoxin HigA-1 D MCI_03870 toxin of toxin-antitoxin K07062 fitB; toxin FitB [EC:3.1.-.-] D MCI_02280 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D MCI_03210 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D MCI_04685 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D MCI_05745 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D MCI_02010 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D MCI_06445 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D MCI_01775 hypothetical protein K09159 cptB; antitoxin CptB D MCI_01155 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D MCI_01160 NifS-like protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors [BR:rmo04054] C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules C 01504 Antimicrobial resistance genes [BR:rmo01504] D MCI_00855 streptomycin 6-kinase K04343 strB; streptomycin 6-kinase [EC:2.7.1.72] D MCI_06985 acetyltransferase K18234 vat; virginiamycin A acetyltransferase [EC:2.3.1.-] D MCI_05730 outer membrane protein tolC precursor K12340 tolC; outer membrane protein C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:rmo03100] D MCI_t07126 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D MCI_t07138 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D MCI_t07136 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D MCI_t07132 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D MCI_t07160 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D MCI_t07180 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D MCI_t07122 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D MCI_t07182 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D MCI_t07134 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D MCI_t07168 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D MCI_t07142 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D MCI_t07146 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D MCI_t07152 tRNA-His K14226 tRNA-His; tRNA His D MCI_t07186 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D MCI_t07140 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D MCI_t07150 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D MCI_t07162 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D MCI_t07184 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D MCI_t07178 tRNA-Met K14230 tRNA-Met; tRNA Met D MCI_t07156 tRNA-Met K14230 tRNA-Met; tRNA Met D MCI_t07172 tRNA-Met K14230 tRNA-Met; tRNA Met D MCI_t07166 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D MCI_t07158 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D MCI_t07128 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D MCI_t07154 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D MCI_t07130 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D MCI_t07176 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D MCI_t07164 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D MCI_t07170 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D MCI_t07174 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D MCI_t07148 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D MCI_t07144 tRNA-Val K14237 tRNA-Val; tRNA Val D MCI_t07124 tRNA-Val K14237 tRNA-Val; tRNA Val D MCI_r07190 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D MCI_r07192 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D MCI_r07188 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D MCI_02745 bacterioferritin comigratory protein K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D MCI_06695 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D MCI_04545 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D MCI_04155 PEP synthetase regulatory protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33] D MCI_02490 TatD family deoxyribonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D MCI_06710 negative regulator of beta-lactamase expression K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D MCI_00455 polypeptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D MCI_05585 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D MCI_04595 polypeptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] C 99981 Carbohydrate metabolism C 99982 Energy metabolism D MCI_03695 ferredoxin K05524 fdxA; ferredoxin C 99983 Lipid metabolism C 99984 Nucleotide metabolism C 99985 Amino acid metabolism C 99986 Glycan metabolism D MCI_02570 glycosyltransferase K07270 K07270; glycosyl transferase, family 25 C 99987 Cofactor metabolism D MCI_02410 2-polyprenylphenol 6-hydroxylase K03688 ubiB; ubiquinone biosynthesis protein D MCI_01920 hypothetical protein K18587 COQ9; ubiquinone biosynthesis protein COQ9 D MCI_05255 oligoketide cyclase/lipid transport protein K18588 COQ10; coenzyme Q-binding protein COQ10 C 99988 Secondary metabolism C 99999 Others D MCI_02985 serine esterase K06999 K06999; phospholipase/carboxylesterase B B 09192 Unclassified: genetic information processing C 99973 Transcription D MCI_02310 cold shock-like protein K03704 cspA; cold shock protein C 99974 Translation C 99975 Protein processing D MCI_03800 tig; trigger factor K03545 tig; trigger factor D MCI_00090 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein C 99976 Replication and repair D MCI_03670 DNA repair protein RadC K03630 radC; DNA repair protein RadC D MCI_02555 RmuC family protein K09760 rmuC; DNA recombination protein RmuC D MCI_06625 excinuclease ABC subunit C K07461 K07461; putative endonuclease C 99979 Viral proteins C 99998 Others D MCI_03955 hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D MCI_01130 putrescine-ornithine antiporter K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D MCI_06240 cationic amino acid transporter-1 K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D MCI_05275 hydrophobe/amphiphile efflux-1 (HAE1) family protein K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family D MCI_04600 ADP,ATP carrier protein K03301 TC.AAA; ATP:ADP antiporter, AAA family D MCI_00425 ATP/ADP translocase K03301 TC.AAA; ATP:ADP antiporter, AAA family D MCI_02935 ADP,ATP carrier protein K03301 TC.AAA; ATP:ADP antiporter, AAA family C 99978 Cell growth D MCI_06905 intracellular septation protein A K06190 ispZ; intracellular septation protein C 99993 Cell motility C 99995 Signaling proteins D MCI_05950 GTP-binding protein K06207 typA; GTP-binding protein C 99992 Structural proteins D MCI_04820 VacJ lipoprotein precursor K04754 mlaA; phospholipid-binding lipoprotein MlaA D MCI_04730 OmpW family outer-membrane protein K07275 ompW; outer membrane protein D MCI_06580 outer membrane assembly protein K07289 asmA; AsmA protein D MCI_01690 cytochrome c-type biogenesis protein CcmE K02197 ccmE; cytochrome c-type biogenesis protein CcmE C 99994 Others D MCI_05360 divalent cation tolerance protein K03926 cutA; periplasmic divalent cation tolerance protein D MCI_06415 cyaY; frataxin-like protein K06202 cyaY; iron-sulfur cluster assembly protein CyaY B B 09194 Poorly characterized C 99996 General function prediction only D MCI_05395 cation transport regulator ChaB K06197 chaB; cation transport regulator D MCI_00520 putative esterase of the alpha/beta hydrolase superfamily protein K07001 K07001; NTE family protein D MCI_04665 HesB protein family protein K15724 erpA; iron-sulfur cluster insertion protein D MCI_00440 putative ribonuclease BN K07058 K07058; membrane protein D MCI_05040 hypothetical protein K07146 K07146; UPF0176 protein C 99997 Function unknown D MCI_05740 ankyrin K06867 K06867; uncharacterized protein D MCI_05330 ankyrin repeat-containing protein K06867 K06867; uncharacterized protein D MCI_06735 hypothetical protein K06867 K06867; uncharacterized protein D MCI_06530 putative hydrolase/acyltransferase K06889 K06889; uncharacterized protein D MCI_05150 stabilizing membrane protein K06890 K06890; uncharacterized protein D MCI_01070 alpha/beta hydrolase K07018 K07018; uncharacterized protein D MCI_05490 TRAP-type transport system, periplasmic protein K07080 K07080; uncharacterized protein D MCI_03190 Putative AAA+ superfamily ATPase K07133 K07133; uncharacterized protein D MCI_02375 Putative AAA+ superfamily ATPase K07133 K07133; uncharacterized protein D MCI_01040 ATPase AAA K07133 K07133; uncharacterized protein D MCI_06615 hypothetical protein K08998 K08998; uncharacterized protein D MCI_03780 hypothetical protein K09131 K09131; uncharacterized protein D MCI_05270 hypothetical protein K09779 K09779; uncharacterized protein D MCI_00680 putative cytoplasmic protein K09861 K09861; uncharacterized protein D MCI_02835 hypothetical protein K09985 K09985; uncharacterized protein D MCI_04720 putative cytoplasmic protein K09987 K09987; uncharacterized protein D MCI_05735 hypothetical protein K09991 K09991; uncharacterized protein D MCI_05015 putative nucleoside-diphosphate-sugar epimerase K07276 K07276; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 22, 2024