+D GENES KO
#
KEGG Orthology (KO) - Roseovarius sp. AK1035
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:rok00010]
D RAK1035_1433 Glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D RAK1035_3415 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RAK1035_3826 Fructose-1,6-bisphosphatase, GlpX type K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D RAK1035_3539 Fructose-bisphosphate aldolase class I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D RAK1035_3230 Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D RAK1035_2424 NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RAK1035_2427 NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RAK1035_2648 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RAK1035_4112 NAD(P)-dependent glyceraldehyde 3-phosphate dehydrogenase archaeal K00150 gap2; glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) [EC:1.2.1.59]
D RAK1035_3538 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D RAK1035_3720 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D RAK1035_3647 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RAK1035_0708 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RAK1035_2475 Pyruvate,phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D RAK1035_2330 Pyruvate dehydrogenase E1 component alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D RAK1035_2331 Pyruvate dehydrogenase E1 component beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D RAK1035_2332 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D RAK1035_0666 Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RAK1035_3780 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RAK1035_0835 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D RAK1035_1699 S-(hydroxymethyl) glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D RAK1035_0502 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RAK1035_1522 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RAK1035_0225 Aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D RAK1035_0532 Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RAK1035_3098 Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RAK1035_0191 Phosphoglucosamine mutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D RAK1035_2125 Phosphoenolpyruvate carboxykinase, ATP K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D RAK1035_2348 Phosphoenolpyruvate carboxykinase, ATP K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
C 00020 Citrate cycle (TCA cycle) [PATH:rok00020]
D RAK1035_3376 Citrate synthase (si) K01647 CS; citrate synthase [EC:2.3.3.1]
D RAK1035_3660 Aconitate hydratase K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D RAK1035_1450 Isocitrate dehydrogenase, NADP K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D RAK1035_0669 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D RAK1035_0668 Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D RAK1035_0666 Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RAK1035_3780 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RAK1035_0670 Succinyl-CoA ligase, ADP-forming alpha chain K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D RAK1035_3886 Succinyl-CoA ligase, ADP-forming alpha chain K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D RAK1035_3889 Succinyl-CoA ligase, ADP-forming alpha chain K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D RAK1035_0671 Succinyl-CoA ligase, ADP-forming beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D RAK1035_3885 Succinyl-CoA ligase, ADP-forming beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D RAK1035_0843 Succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D RAK1035_0841 Succinate dehydrogenase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D RAK1035_0845 Succinate dehydrogenase cytochrome b-556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D RAK1035_0844 Succinate dehydrogenase hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D RAK1035_1141 Succinate dehydrogenase flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D RAK1035_1138 Succinate dehydrogenase iron-sulfur protein K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D RAK1035_1139 Succinate dehydrogenase hydrophobic anchor protein K00246 frdC; succinate dehydrogenase subunit C
D RAK1035_1140 Succinate dehydrogenase cytochrome b-556 subunit K00247 frdD; succinate dehydrogenase subunit D
D RAK1035_2917 Fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D RAK1035_0673 Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D RAK1035_3695 Pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D RAK1035_2125 Phosphoenolpyruvate carboxykinase, ATP K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D RAK1035_2348 Phosphoenolpyruvate carboxykinase, ATP K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D RAK1035_2330 Pyruvate dehydrogenase E1 component alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D RAK1035_2331 Pyruvate dehydrogenase E1 component beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D RAK1035_2332 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:rok00030]
D RAK1035_3415 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RAK1035_1783 Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D RAK1035_3413 Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D RAK1035_3414 6-phosphogluconolactonase, eukaryotic type K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D RAK1035_3347 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D RAK1035_0660 Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D RAK1035_3563 Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RAK1035_2694 Transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D RAK1035_0236 Ribose 5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D RAK1035_1108 Ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D RAK1035_0191 Phosphoglucosamine mutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D RAK1035_0269 ATP-binding protein PhnN K05774 phnN; ribose 1,5-bisphosphokinase [EC:2.7.4.23]
D RAK1035_2003 Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D RAK1035_4096 Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D RAK1035_1784 Phosphogluconate dehydratase K01690 edd; phosphogluconate dehydratase [EC:4.2.1.12]
D RAK1035_1785 4-Hydroxy-2-oxoglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D RAK1035_0699 D-glycerate 2-kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D RAK1035_3539 Fructose-bisphosphate aldolase class I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D RAK1035_3826 Fructose-1,6-bisphosphatase, GlpX type K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
C 00040 Pentose and glucuronate interconversions [PATH:rok00040]
D RAK1035_0722 UDP-glucose dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D RAK1035_0998 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D RAK1035_0660 Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D RAK1035_2614 Ketoglutarate semialdehyde dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
D RAK1035_2548 Aldehyde dehydrogenase B K22187 xylA; alpha-ketoglutaric semialdehyde dehydrogenase [EC:1.2.1.-]
C 00051 Fructose and mannose metabolism [PATH:rok00051]
D RAK1035_3338 Mannose-1-phosphate guanylyltransferase (GDP) K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D RAK1035_0191 Phosphoglucosamine mutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D RAK1035_3327 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D RAK1035_3322 GDP-L-fucose synthetase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D RAK1035_0078 Fumarylacetoacetate hydrolase family protein K18336 lra6; 2,4-didehydro-3-deoxy-L-rhamnonate hydrolase [EC:3.7.1.26]
D RAK1035_3826 Fructose-1,6-bisphosphatase, GlpX type K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D RAK1035_3539 Fructose-bisphosphate aldolase class I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D RAK1035_3230 Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D RAK1035_2130 PTS system permease (IIAMan), nitrogen regulatory IIA protein K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
C 00052 Galactose metabolism [PATH:rok00052]
D RAK1035_0999 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RAK1035_0998 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D RAK1035_0191 Phosphoglucosamine mutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D RAK1035_1433 Glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D RAK1035_3332 Oxidoreductase, short chain dehydrogenase/reductase family K22215 galD; galactose dehydrogenase [EC:1.1.1.48 1.1.1.120]
D RAK1035_0057 Muconolactone isomerase,putative K01684 dgoD; galactonate dehydratase [EC:4.2.1.6]
C 00053 Ascorbate and aldarate metabolism [PATH:rok00053]
D RAK1035_0722 UDP-glucose dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D RAK1035_2065 UDP-glucuronate 5'-epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D RAK1035_0502 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RAK1035_1522 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RAK1035_2614 Ketoglutarate semialdehyde dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
C 00500 Starch and sucrose metabolism [PATH:rok00500]
D RAK1035_0998 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D RAK1035_0191 Phosphoglucosamine mutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D RAK1035_1433 Glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D RAK1035_3415 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00620 Pyruvate metabolism [PATH:rok00620]
D RAK1035_0532 Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RAK1035_3098 Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RAK1035_2330 Pyruvate dehydrogenase E1 component alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D RAK1035_2331 Pyruvate dehydrogenase E1 component beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D RAK1035_2332 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D RAK1035_0666 Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RAK1035_3780 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RAK1035_0835 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D RAK1035_1699 S-(hydroxymethyl) glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D RAK1035_0732 Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D RAK1035_0708 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RAK1035_3872 Acetyl-coenzyme A carboxyl transferase alpha chain K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D RAK1035_2563 Biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D RAK1035_2562 Biotin carboxylase of acetyl-CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D RAK1035_3867 Acetyl-coenzyme A carboxyl transferase beta chain K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D RAK1035_0502 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RAK1035_1522 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RAK1035_0225 Aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D RAK1035_3421 L-lactate dehydrogenase K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3]
D RAK1035_3694 L-lactate dehydrogenase K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3]
D RAK1035_2351 D-Lactate dehydrogenase, cytochrome c-dependent K00102 LDHD; D-lactate dehydrogenase (cytochrome) [EC:1.1.2.4]
D RAK1035_3405 Lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D RAK1035_3699 Lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D RAK1035_0175 Hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D RAK1035_0425 D-3-phosphoglycerate dehydrogenase K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D RAK1035_2654 NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D RAK1035_3695 Pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D RAK1035_0673 Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D RAK1035_2917 Fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D RAK1035_1141 Succinate dehydrogenase flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D RAK1035_1138 Succinate dehydrogenase iron-sulfur protein K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D RAK1035_1139 Succinate dehydrogenase hydrophobic anchor protein K00246 frdC; succinate dehydrogenase subunit C
D RAK1035_1140 Succinate dehydrogenase cytochrome b-556 subunit K00247 frdD; succinate dehydrogenase subunit D
D RAK1035_2125 Phosphoenolpyruvate carboxykinase, ATP K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D RAK1035_2348 Phosphoenolpyruvate carboxykinase, ATP K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D RAK1035_2475 Pyruvate,phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D RAK1035_3849 Malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9]
D RAK1035_0792 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAK1035_0815 Acetyl-CoA acetyltransferase of ethylmalonyl-CoA pathway K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAK1035_1340 Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAK1035_1986 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAK1035_2443 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D RAK1035_3356 (R)-citramalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:rok00630]
D RAK1035_3849 Malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9]
D RAK1035_0673 Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D RAK1035_3376 Citrate synthase (si) K01647 CS; citrate synthase [EC:2.3.3.1]
D RAK1035_3660 Aconitate hydratase K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D RAK1035_1037 Malyl-CoA lyase K08691 mcl; malyl-CoA/(S)-citramalyl-CoA lyase [EC:4.1.3.24 4.1.3.25]
D RAK1035_2340 Malyl-CoA lyase K08691 mcl; malyl-CoA/(S)-citramalyl-CoA lyase [EC:4.1.3.24 4.1.3.25]
D RAK1035_0677 L-malyl-CoA/beta-methylmalyl-CoA lyase K14451 mcl2; (3S)-malyl-CoA thioesterase [EC:3.1.2.30]
D RAK1035_2338 Succinyl-CoA ligase, ADP-forming alpha chain K08692 mtkB; malate-CoA ligase subunit alpha [EC:6.2.1.9]
D RAK1035_2339 Succinyl-CoA ligase, ADP-forming beta chain K14067 mtkA; malate-CoA ligase subunit beta [EC:6.2.1.9]
D RAK1035_3888 Succinyl-CoA ligase, ADP-forming beta chain K14067 mtkA; malate-CoA ligase subunit beta [EC:6.2.1.9]
D RAK1035_0532 Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RAK1035_3098 Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RAK1035_0792 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAK1035_0815 Acetyl-CoA acetyltransferase of ethylmalonyl-CoA pathway K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAK1035_1340 Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAK1035_1986 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAK1035_0816 Acetoacetyl-CoA reductase of ethylmalonyl-CoA pathway K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D RAK1035_3265 Acyl dehydratase K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55]
D RAK1035_1354 Crotonyl-CoA carboxylase/reductase, ethylmalonyl-CoA producing K14446 ccr; crotonyl-CoA carboxylase/reductase [EC:1.3.1.85]
D RAK1035_0473 Methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D RAK1035_1351 Ethylmalonyl-CoA mutase, methylsuccinyl-CoA-forming K14447 ecm; ethylmalonyl-CoA mutase [EC:5.4.99.63]
D RAK1035_0274 Methylsuccinyl-CoA dehydrogenase K14448 mcd; (2S)-methylsuccinyl-CoA dehydrogenase [EC:1.3.8.12]
D RAK1035_0680 Mesaconyl-CoA hydratase K14449 mch; 2-methylfumaryl-CoA hydratase [EC:4.2.1.148]
D RAK1035_3912 Propionyl-CoA carboxylase biotin-containing subunit K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3]
D RAK1035_3919 Propionyl-CoA carboxylase carboxyl transferase subunit K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D RAK1035_3908 Methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D RAK1035_0938 Low-specificity L-threonine aldolase K18425 dhaa; 3-hydroxy-D-aspartate aldolase [EC:4.1.3.41]
D RAK1035_0939 Threonine dehydratase, catabolic K28180 bhcB; beta-hydroxyaspartate dehydratase [EC:4.2.1.-]
D RAK1035_0937 Ornithine cyclodeaminase K28178 bhcD; iminosuccinate reductase [EC:1.4.1.-]
D RAK1035_0940 Serine--glyoxylate aminotransferase K28179 bhcA; glycine---oxaloacetate transaminase [EC:2.6.1.35]
D RAK1035_1396 Glycolate dehydrogenase, subunit GlcD K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]
D RAK1035_1397 Glycolate dehydrogenase, FAD-binding subunit GlcE K11472 glcE; glycolate dehydrogenase FAD-binding subunit [EC:1.1.99.14]
D RAK1035_1398 Glycolate dehydrogenase, iron-sulfur subunit GlcF K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14]
D RAK1035_2177 Catalase K03781 katE; catalase [EC:1.11.1.6]
D RAK1035_1528 Glyoxylate reductase K00015 gyaR; glyoxylate reductase [EC:1.1.1.26]
D RAK1035_0425 D-3-phosphoglycerate dehydrogenase K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D RAK1035_0659 Phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D RAK1035_1752 hypothetical protein K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D RAK1035_2712 HAD-superfamily hydrolase, subfamily IA, variant 1 family protein K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D RAK1035_3656 Phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D RAK1035_1251 Serine--glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D RAK1035_2341 Serine--glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D RAK1035_2561 Serine--glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D RAK1035_0947 Glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RAK1035_1865 Glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RAK1035_2880 Glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RAK1035_3437 Glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RAK1035_3439 Glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RAK1035_3454 Glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RAK1035_0118 Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RAK1035_2660 Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RAK1035_2541 Glycine dehydrogenase, decarboxylating (glycine cleavage system P protein) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D RAK1035_2452 Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D RAK1035_2525 Aminomethyltransferase (glycine cleavage system T protein) K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D RAK1035_2878 Sarcosine oxidase alpha subunit K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D RAK1035_2887 Sarcosine oxidase alpha subunit K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D RAK1035_0666 Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RAK1035_3780 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RAK1035_2526 Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D RAK1035_0699 D-glycerate 2-kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D RAK1035_1142 Fumarate hydratase class I, aerobic K03779 ttdA; L(+)-tartrate dehydratase alpha subunit [EC:4.2.1.32]
D RAK1035_1143 Fumarate hydratase class I, aerobic K03780 ttdB; L(+)-tartrate dehydratase beta subunit [EC:4.2.1.32]
D RAK1035_1785 4-Hydroxy-2-oxoglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D RAK1035_2781 NAD-dependent formate dehydrogenase delta subunit K00126 fdsD; formate dehydrogenase subunit delta [EC:1.17.1.9]
D RAK1035_2035 Formate dehydrogenase-O, major subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D RAK1035_2779 NAD-dependent formate dehydrogenase alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D RAK1035_3687 Tungsten-containing formate dehydrogenase alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D RAK1035_2497 Tungsten-containing formate dehydrogenase beta subunit K22515 fdwB; formate dehydrogenase beta subunit [EC:1.17.1.9]
D RAK1035_2036 Formate dehydrogenase-O, iron-sulfur subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D RAK1035_2778 NAD-dependent formate dehydrogenase beta subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D RAK1035_2037 Formate dehydrogenase -O, gamma subunit K00127 fdoI; formate dehydrogenase subunit gamma
D RAK1035_2777 NAD-dependent formate dehydrogenase gamma subunit K00127 fdoI; formate dehydrogenase subunit gamma
D RAK1035_0546 N-formylglutamate deformylase K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68]
D RAK1035_3882 Oxalyl-CoA decarboxylase K01577 oxc; oxalyl-CoA decarboxylase [EC:4.1.1.8]
D RAK1035_3881 Formyl-coenzyme A transferase K07749 frc; formyl-CoA transferase [EC:2.8.3.16]
C 00640 Propanoate metabolism [PATH:rok00640]
D RAK1035_0532 Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RAK1035_3098 Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RAK1035_2656 Acetyl-coenzyme A synthetase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D RAK1035_0732 Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D RAK1035_0666 Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RAK1035_3780 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RAK1035_2046 Alcohol dehydrogenase K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-]
D RAK1035_0791 Enoyl-CoA hydratase, isoleucine degradation K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D RAK1035_3872 Acetyl-coenzyme A carboxyl transferase alpha chain K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D RAK1035_2563 Biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D RAK1035_2562 Biotin carboxylase of acetyl-CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D RAK1035_3867 Acetyl-coenzyme A carboxyl transferase beta chain K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D RAK1035_1714 Malonyl-CoA decarboxylase K01578 MLYCD; malonyl-CoA decarboxylase [EC:4.1.1.9]
D RAK1035_3912 Propionyl-CoA carboxylase biotin-containing subunit K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3]
D RAK1035_3919 Propionyl-CoA carboxylase carboxyl transferase subunit K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D RAK1035_0473 Methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D RAK1035_3908 Methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D RAK1035_0671 Succinyl-CoA ligase, ADP-forming beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D RAK1035_3885 Succinyl-CoA ligase, ADP-forming beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D RAK1035_0670 Succinyl-CoA ligase, ADP-forming alpha chain K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D RAK1035_3886 Succinyl-CoA ligase, ADP-forming alpha chain K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D RAK1035_3889 Succinyl-CoA ligase, ADP-forming alpha chain K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D RAK1035_2420 Methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D RAK1035_3660 Aconitate hydratase K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
C 00650 Butanoate metabolism [PATH:rok00650]
D RAK1035_0792 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAK1035_0815 Acetyl-CoA acetyltransferase of ethylmalonyl-CoA pathway K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAK1035_1340 Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAK1035_1986 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAK1035_2133 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D RAK1035_2582 Enoyl-CoA hydratase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D RAK1035_0791 Enoyl-CoA hydratase, isoleucine degradation K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D RAK1035_1247 Enoyl-CoA hydratase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D RAK1035_1496 Enoyl-CoA hydratase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D RAK1035_3265 Acyl dehydratase K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55]
D RAK1035_0344 Polyhydroxyalkanoic acid synthase K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D RAK1035_0627 Polyhydroxyalkanoic acid synthase K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D RAK1035_0345 Polyhydroxyalkanoate depolymerase, intracellular K05973 phaZ; poly(3-hydroxybutyrate) depolymerase [EC:3.1.1.75]
D RAK1035_0816 Acetoacetyl-CoA reductase of ethylmalonyl-CoA pathway K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D RAK1035_3183 Asp/Glu/Hydantoin racemase family protein K01799 nicE; maleate isomerase [EC:5.2.1.1]
D RAK1035_0843 Succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D RAK1035_0841 Succinate dehydrogenase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D RAK1035_0845 Succinate dehydrogenase cytochrome b-556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D RAK1035_0844 Succinate dehydrogenase hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D RAK1035_1141 Succinate dehydrogenase flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D RAK1035_1138 Succinate dehydrogenase iron-sulfur protein K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D RAK1035_1139 Succinate dehydrogenase hydrophobic anchor protein K00246 frdC; succinate dehydrogenase subunit C
D RAK1035_1140 Succinate dehydrogenase cytochrome b-556 subunit K00247 frdD; succinate dehydrogenase subunit D
D RAK1035_1403 Aldehyde dehydrogenase B K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D RAK1035_3091 Hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D RAK1035_0317 Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D RAK1035_0318 Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D RAK1035_0125 D-beta-hydroxybutyrate dehydrogenase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30]
D RAK1035_3005 D-beta-hydroxybutyrate dehydrogenase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30]
D RAK1035_0915 Hypothetical protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RAK1035_1726 Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RAK1035_2163 Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RAK1035_2733 Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RAK1035_2732 Acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:rok00660]
D RAK1035_0915 Hypothetical protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RAK1035_1726 Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RAK1035_2163 Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RAK1035_2733 Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RAK1035_2732 Acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D RAK1035_0982 L-carnitine dehydratase/bile acid-inducible protein F K18289 ict-P; itaconate CoA-transferase [EC:2.8.3.- 2.8.3.22]
D RAK1035_0671 Succinyl-CoA ligase, ADP-forming beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D RAK1035_3885 Succinyl-CoA ligase, ADP-forming beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D RAK1035_0670 Succinyl-CoA ligase, ADP-forming alpha chain K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D RAK1035_3886 Succinyl-CoA ligase, ADP-forming alpha chain K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D RAK1035_3889 Succinyl-CoA ligase, ADP-forming alpha chain K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D RAK1035_1037 Malyl-CoA lyase K08691 mcl; malyl-CoA/(S)-citramalyl-CoA lyase [EC:4.1.3.24 4.1.3.25]
D RAK1035_2340 Malyl-CoA lyase K08691 mcl; malyl-CoA/(S)-citramalyl-CoA lyase [EC:4.1.3.24 4.1.3.25]
D RAK1035_0680 Mesaconyl-CoA hydratase K14449 mch; 2-methylfumaryl-CoA hydratase [EC:4.2.1.148]
D RAK1035_0220 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D RAK1035_0221 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D RAK1035_0224 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:rok00562]
D RAK1035_1913 Inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D RAK1035_2142 Inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D RAK1035_2420 Methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D RAK1035_3230 Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:rok00190]
D RAK1035_3089 NADH ubiquinone oxidoreductase chain A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D RAK1035_3088 NADH-ubiquinone oxidoreductase chain B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D RAK1035_3087 NADH-ubiquinone oxidoreductase chain C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D RAK1035_3086 NADH-ubiquinone oxidoreductase chain D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D RAK1035_3082 NADH-ubiquinone oxidoreductase chain E K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D RAK1035_3079 NADH-ubiquinone oxidoreductase chain F K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D RAK1035_3076 NADH-ubiquinone oxidoreductase chain G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D RAK1035_3074 NADH-ubiquinone oxidoreductase chain H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D RAK1035_3073 NADH-ubiquinone oxidoreductase chain I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D RAK1035_3071 NADH-ubiquinone oxidoreductase chain J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D RAK1035_3069 NADH-ubiquinone oxidoreductase chain K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D RAK1035_3068 NADH-ubiquinone oxidoreductase chain L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D RAK1035_3067 NADH-ubiquinone oxidoreductase chain M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D RAK1035_3066 NADH-ubiquinone oxidoreductase chain N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D RAK1035_0843 Succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D RAK1035_0841 Succinate dehydrogenase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D RAK1035_0845 Succinate dehydrogenase cytochrome b-556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D RAK1035_0844 Succinate dehydrogenase hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D RAK1035_1141 Succinate dehydrogenase flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D RAK1035_1138 Succinate dehydrogenase iron-sulfur protein K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D RAK1035_1139 Succinate dehydrogenase hydrophobic anchor protein K00246 frdC; succinate dehydrogenase subunit C
D RAK1035_1140 Succinate dehydrogenase cytochrome b-556 subunit K00247 frdD; succinate dehydrogenase subunit D
D RAK1035_1879 Ubiquinol-cytochrome C reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D RAK1035_4103 Ubiquinol-cytochrome C reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D RAK1035_1880 Ubiquinol--cytochrome c reductase, cytochrome B subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D RAK1035_1881 Ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D RAK1035_0310 Cytochrome c oxidase polypeptide I K02257 COX10; heme o synthase [EC:2.5.1.141]
D RAK1035_0307 Cytochrome c oxidase polypeptide III K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D RAK1035_2246 Cytochrome c oxidase polypeptide I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D RAK1035_0311 Cytochrome c oxidase polypeptide II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D RAK1035_0308 Cytochrome oxidase biogenesis protein Cox11-CtaG, copper delivery to Cox1 K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D RAK1035_3555 Heme A synthase, cytochrome oxidase biogenesis protein Cox15-CtaA K02259 COX15; heme a synthase [EC:1.17.99.9]
D RAK1035_1662 Cytochrome c oxidase subunit CcoN K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D RAK1035_1663 Cytochrome c oxidase subunit CcoO K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D RAK1035_1664 Cytochrome c oxidase subunit CcoQ K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D RAK1035_1665 Cytochrome c oxidase subunit CcoP K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D RAK1035_1164 Sulfite dehydrogenase cytochrome subunit SoxD K08738 CYC; cytochrome c
D RAK1035_2038 WD domain/cytochrome c family protein K08738 CYC; cytochrome c
D RAK1035_2515 Cytochrome c2 K08738 CYC; cytochrome c
D RAK1035_3764 Cytochrome c2 K08738 CYC; cytochrome c
D RAK1035_0168 ATP synthase alpha chain K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D RAK1035_0166 ATP synthase beta chain K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D RAK1035_0167 ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D RAK1035_0169 ATP synthase delta chain K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D RAK1035_0165 ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D RAK1035_0849 ATP synthase F0 sector subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D RAK1035_0846 ATP synthase F0 sector subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D RAK1035_0847 ATP synthase B' chain K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D RAK1035_0848 ATP synthase F0 sector subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D RAK1035_1733 Manganese-dependent inorganic pyrophosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1]
D RAK1035_0002 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D RAK1035_2817 Polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D RAK1035_3416 Polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:rok00710]
D RAK1035_3538 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D RAK1035_2424 NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RAK1035_2427 NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RAK1035_2648 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RAK1035_4112 NAD(P)-dependent glyceraldehyde 3-phosphate dehydrogenase archaeal K00150 gap2; glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) [EC:1.2.1.59]
D RAK1035_3539 Fructose-bisphosphate aldolase class I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D RAK1035_3826 Fructose-1,6-bisphosphatase, GlpX type K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D RAK1035_3563 Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RAK1035_0236 Ribose 5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D RAK1035_3230 Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D RAK1035_0660 Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D RAK1035_2694 Transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D RAK1035_2125 Phosphoenolpyruvate carboxykinase, ATP K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D RAK1035_2348 Phosphoenolpyruvate carboxykinase, ATP K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D RAK1035_2475 Pyruvate,phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D RAK1035_2654 NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D RAK1035_0673 Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
C 00720 Other carbon fixation pathways [PATH:rok00720]
D RAK1035_2475 Pyruvate,phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D RAK1035_3695 Pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D RAK1035_0673 Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D RAK1035_2917 Fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D RAK1035_0843 Succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D RAK1035_0841 Succinate dehydrogenase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D RAK1035_0845 Succinate dehydrogenase cytochrome b-556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D RAK1035_0844 Succinate dehydrogenase hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D RAK1035_1141 Succinate dehydrogenase flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D RAK1035_1138 Succinate dehydrogenase iron-sulfur protein K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D RAK1035_1139 Succinate dehydrogenase hydrophobic anchor protein K00246 frdC; succinate dehydrogenase subunit C
D RAK1035_1140 Succinate dehydrogenase cytochrome b-556 subunit K00247 frdD; succinate dehydrogenase subunit D
D RAK1035_0670 Succinyl-CoA ligase, ADP-forming alpha chain K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D RAK1035_3886 Succinyl-CoA ligase, ADP-forming alpha chain K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D RAK1035_3889 Succinyl-CoA ligase, ADP-forming alpha chain K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D RAK1035_0671 Succinyl-CoA ligase, ADP-forming beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D RAK1035_3885 Succinyl-CoA ligase, ADP-forming beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D RAK1035_0792 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAK1035_0815 Acetyl-CoA acetyltransferase of ethylmalonyl-CoA pathway K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAK1035_1340 Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAK1035_1986 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAK1035_1450 Isocitrate dehydrogenase, NADP K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D RAK1035_3660 Aconitate hydratase K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D RAK1035_3872 Acetyl-coenzyme A carboxyl transferase alpha chain K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D RAK1035_2563 Biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D RAK1035_2562 Biotin carboxylase of acetyl-CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D RAK1035_3867 Acetyl-coenzyme A carboxyl transferase beta chain K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D RAK1035_1037 Malyl-CoA lyase K08691 mcl; malyl-CoA/(S)-citramalyl-CoA lyase [EC:4.1.3.24 4.1.3.25]
D RAK1035_2340 Malyl-CoA lyase K08691 mcl; malyl-CoA/(S)-citramalyl-CoA lyase [EC:4.1.3.24 4.1.3.25]
D RAK1035_0680 Mesaconyl-CoA hydratase K14449 mch; 2-methylfumaryl-CoA hydratase [EC:4.2.1.148]
D RAK1035_2623 Mesaconyl-CoA C1-C4 CoA transferase K14470 mct; 2-methylfumaryl-CoA isomerase [EC:5.4.1.3]
D RAK1035_0985 Hydroxyacyl-ACP dehydratase HTD2, hotdog domain (Lipid transport and metabolism) K09709 meh; 3-methylfumaryl-CoA hydratase [EC:4.2.1.153]
D RAK1035_0473 Methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D RAK1035_3908 Methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D RAK1035_1210 Formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D RAK1035_1211 Methylenetetrahydrofolate dehydrogenase (NADP+) K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D RAK1035_0059 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D RAK1035_2855 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D RAK1035_0732 Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D RAK1035_0532 Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RAK1035_3098 Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
C 00680 Methane metabolism [PATH:rok00680]
D RAK1035_1700 Methanol dehydrogenase large subunit protein K23995 xoxF; lanthanide-dependent methanol dehydrogenase [EC:1.1.2.10]
D RAK1035_0835 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D RAK1035_1699 S-(hydroxymethyl) glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D RAK1035_0959 S-formylglutathione hydrolase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12]
D RAK1035_2035 Formate dehydrogenase-O, major subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D RAK1035_2779 NAD-dependent formate dehydrogenase alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D RAK1035_3687 Tungsten-containing formate dehydrogenase alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D RAK1035_2497 Tungsten-containing formate dehydrogenase beta subunit K22515 fdwB; formate dehydrogenase beta subunit [EC:1.17.1.9]
D RAK1035_2036 Formate dehydrogenase-O, iron-sulfur subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D RAK1035_2778 NAD-dependent formate dehydrogenase beta subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D RAK1035_2037 Formate dehydrogenase -O, gamma subunit K00127 fdoI; formate dehydrogenase subunit gamma
D RAK1035_2777 NAD-dependent formate dehydrogenase gamma subunit K00127 fdoI; formate dehydrogenase subunit gamma
D RAK1035_2781 NAD-dependent formate dehydrogenase delta subunit K00126 fdsD; formate dehydrogenase subunit delta [EC:1.17.1.9]
D RAK1035_0118 Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RAK1035_2660 Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RAK1035_1251 Serine--glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D RAK1035_2341 Serine--glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D RAK1035_2561 Serine--glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D RAK1035_0699 D-glycerate 2-kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D RAK1035_3647 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RAK1035_0673 Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D RAK1035_2338 Succinyl-CoA ligase, ADP-forming alpha chain K08692 mtkB; malate-CoA ligase subunit alpha [EC:6.2.1.9]
D RAK1035_2339 Succinyl-CoA ligase, ADP-forming beta chain K14067 mtkA; malate-CoA ligase subunit beta [EC:6.2.1.9]
D RAK1035_3888 Succinyl-CoA ligase, ADP-forming beta chain K14067 mtkA; malate-CoA ligase subunit beta [EC:6.2.1.9]
D RAK1035_1037 Malyl-CoA lyase K08691 mcl; malyl-CoA/(S)-citramalyl-CoA lyase [EC:4.1.3.24 4.1.3.25]
D RAK1035_2340 Malyl-CoA lyase K08691 mcl; malyl-CoA/(S)-citramalyl-CoA lyase [EC:4.1.3.24 4.1.3.25]
D RAK1035_3539 Fructose-bisphosphate aldolase class I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D RAK1035_3826 Fructose-1,6-bisphosphatase, GlpX type K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D RAK1035_2462 Histamine dehydrogenase K00317 dmd-tmd; dimethylamine/trimethylamine dehydrogenase [EC:1.5.8.1 1.5.8.2]
D RAK1035_2867 Flavin-containing monooxygenase K18277 tmm; trimethylamine monooxygenase [EC:1.14.13.148]
D RAK1035_2883 Glutamine amidotransferase protein GlxB K22081 mgsA; methylamine---glutamate N-methyltransferase subunit A [EC:2.1.1.21]
D RAK1035_2882 Glutamate synthase, NADPH putative GlxC chain K22082 mgsB; methylamine---glutamate N-methyltransferase subunit B [EC:2.1.1.21]
D RAK1035_2881 Glutamate synthase, NADPH large chain K22083 mgsC; methylamine---glutamate N-methyltransferase subunit C [EC:2.1.1.21]
D RAK1035_3178 Sarcosine oxidase beta subunit K22084 mgdA; methylglutamate dehydrogenase subunit A [EC:1.5.99.5]
D RAK1035_3815 Sarcosine oxidase beta subunit K22084 mgdA; methylglutamate dehydrogenase subunit A [EC:1.5.99.5]
D RAK1035_3179 Sarcosine oxidase delta subunit K22085 mgdB; methylglutamate dehydrogenase subunit B [EC:1.5.99.5]
D RAK1035_3814 Sarcosine oxidase delta subunit K22085 mgdB; methylglutamate dehydrogenase subunit B [EC:1.5.99.5]
D RAK1035_3180 Sarcosine oxidase alpha subunit K22086 mgdC; methylglutamate dehydrogenase subunit C [EC:1.5.99.5]
D RAK1035_3813 Sarcosine oxidase alpha subunit K22086 mgdC; methylglutamate dehydrogenase subunit C [EC:1.5.99.5]
D RAK1035_3181 Sarcosine oxidase gamma subunit K22087 mgdD; methylglutamate dehydrogenase subunit D [EC:1.5.99.5]
D RAK1035_3812 Sarcosine oxidase gamma subunit K22087 mgdD; methylglutamate dehydrogenase subunit D [EC:1.5.99.5]
D RAK1035_0732 Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D RAK1035_0532 Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RAK1035_3098 Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RAK1035_3720 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D RAK1035_1337 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D RAK1035_1336 Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D RAK1035_1335 Phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D RAK1035_1553 Trimethylamine methyltransferase family protein K14083 mttB; trimethylamine---corrinoid protein Co-methyltransferase [EC:2.1.1.250]
D RAK1035_2714 Trimethylamine methyltransferase family protein K14083 mttB; trimethylamine---corrinoid protein Co-methyltransferase [EC:2.1.1.250]
D RAK1035_2827 Trimethylamine methyltransferase family protein K14083 mttB; trimethylamine---corrinoid protein Co-methyltransferase [EC:2.1.1.250]
D RAK1035_3359 Trimethylamine methyltransferase family protein K14083 mttB; trimethylamine---corrinoid protein Co-methyltransferase [EC:2.1.1.250]
D RAK1035_3504 Trimethylamine methyltransferase family protein K14083 mttB; trimethylamine---corrinoid protein Co-methyltransferase [EC:2.1.1.250]
C 00910 Nitrogen metabolism [PATH:rok00910]
D RAK1035_0623 Nitrate ABC transporter, nitrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D RAK1035_1619 Cyanate ABC transporter, substrate binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D RAK1035_0622 Cyanate ABC transporter, permease protein K15577 nrtB; nitrate/nitrite transport system permease protein
D RAK1035_1620 Cyanate ABC transporter, permease protein K15577 nrtB; nitrate/nitrite transport system permease protein
D RAK1035_0621 Nitrate ABC transporter, ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D RAK1035_1621 Cyanate ABC transporter, ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D RAK1035_0618 Assimilatory nitrate reductase large subunit K00372 nasC; assimilatory nitrate reductase catalytic subunit [EC:1.7.99.-]
D RAK1035_0620 Nitrite reductase, NAD(P)H large subunit K26139 nasD; nitrite reductase [NAD(P)H] large subunit [EC:1.7.1.4]
D RAK1035_0619 Nitrite reductase, NAD(P)H small subunit K26138 nasE; nitrite reductase [NAD(P)H] small subunit [EC:1.7.1.4]
D RAK1035_2284 Nitrous-oxide reductase K00376 nosZ; nitrous-oxide reductase [EC:1.7.2.4]
D RAK1035_0658 Enoyl-acyl-carrier-protein reductase, FMN K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D RAK1035_3816 NAD-specific glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D RAK1035_0947 Glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RAK1035_1865 Glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RAK1035_2880 Glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RAK1035_3437 Glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RAK1035_3439 Glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RAK1035_3454 Glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RAK1035_1017 Glutamate synthase, NADPH large chain K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D RAK1035_1016 Glutamate synthase, NADPH small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D RAK1035_1622 Cyanate hydratase K01725 cynS; cyanate lyase [EC:4.2.1.104]
D RAK1035_4114 Carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D RAK1035_0790 Carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:rok00920]
D RAK1035_0808 Taurine-binding periplasmic protein TauA K15551 tauA; taurine transport system substrate-binding protein
D RAK1035_0810 Taurine transport system permease protein TauC K15552 tauC; taurine transport system permease protein
D RAK1035_0809 Taurine transport ATP-binding protein TauB K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7]
D RAK1035_1446 Sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D RAK1035_0996 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D RAK1035_3235 Phosphoadenylyl-sulfate reductase, thioredoxin K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D RAK1035_0733 Anaerobic dimethyl sulfoxide reductase chain A K21307 soeA; sulfite dehydrogenase (quinone) subunit SoeA [EC:1.8.5.6]
D RAK1035_0735 Anaerobic dimethyl sulfoxide reductase chain B K21308 soeB; sulfite dehydrogenase (quinone) subunit SoeB
D RAK1035_0736 Anaerobic dimethyl sulfoxide reductase chain C K21309 soeC; sulfite dehydrogenase (quinone) subunit SoeC
D RAK1035_1160 Sulfur oxidation protein SoxA K17222 soxA; L-cysteine S-thiosulfotransferase [EC:2.8.5.2]
D RAK1035_1157 Sulfur oxidation protein SoxX K17223 soxX; L-cysteine S-thiosulfotransferase [EC:2.8.5.2]
D RAK1035_1158 Sulfur oxidation protein SoxY K17226 soxY; sulfur-oxidizing protein SoxY
D RAK1035_1696 Hypothetical protein K17226 soxY; sulfur-oxidizing protein SoxY
D RAK1035_1704 Hypothetical protein K17226 soxY; sulfur-oxidizing protein SoxY
D RAK1035_1159 Sulfur oxidation protein SoxZ K17227 soxZ; sulfur-oxidizing protein SoxZ
D RAK1035_1161 Sulfur oxidation protein SoxB K17224 soxB; S-sulfosulfanyl-L-cysteine sulfohydrolase [EC:3.1.6.20]
D RAK1035_1162 Sulfur oxidation molybdopterin C protein K17225 soxC; sulfane dehydrogenase subunit SoxC
D RAK1035_1163 Sulfite dehydrogenase cytochrome subunit SoxD K22622 soxD; S-disulfanyl-L-cysteine oxidoreductase SoxD [EC:1.8.2.6]
D RAK1035_3234 Sulfite reductase, NADPH hemoprotein beta-component K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
D RAK1035_1165 Sulfide dehydrogenase, flavocytochrome C flavoprotein chain precursor K17229 fccB; sulfide dehydrogenase [flavocytochrome c] flavoprotein chain [EC:1.8.2.3]
D RAK1035_1707 Thiosulfate sulfurtransferase, rhodanese K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D RAK1035_3026 Rhodanese-related sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D RAK1035_0026 Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D RAK1035_2927 Cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D RAK1035_2819 Homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D RAK1035_3182 Cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D RAK1035_2504 O-acetylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
D RAK1035_3580 Metallopeptidase, family M24 K28067 dddP; dimethylpropiothetin dethiomethylase [EC:4.4.1.3]
D RAK1035_2045 DMSP demethylase (DmdA) K17486 dmdA; dimethylsulfoniopropionate demethylase [EC:2.1.1.269]
D RAK1035_0563 Medium-chain-fatty-acid--CoA ligase K20034 dmdB; 3-(methylthio)propionyl---CoA ligase [EC:6.2.1.44]
D RAK1035_0748 AMP-binding protein K20034 dmdB; 3-(methylthio)propionyl---CoA ligase [EC:6.2.1.44]
D RAK1035_2434 3-methylmercaptopropionyl-CoA ligase (DmdB) K20034 dmdB; 3-(methylthio)propionyl---CoA ligase [EC:6.2.1.44]
D RAK1035_0796 3-methylmercaptopropionyl-CoA dehydrogenase (DmdC) K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
D RAK1035_3713 3-methylmercaptopropionyl-CoA dehydrogenase (DmdC) K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:rok00061]
D RAK1035_3872 Acetyl-coenzyme A carboxyl transferase alpha chain K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D RAK1035_2563 Biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D RAK1035_2562 Biotin carboxylase of acetyl-CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D RAK1035_3867 Acetyl-coenzyme A carboxyl transferase beta chain K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D RAK1035_2835 Acyl carrier protein K02078 acpP; acyl carrier protein
D RAK1035_2952 Acyl carrier protein, putative K02078 acpP; acyl carrier protein
D RAK1035_3470 Acyl carrier protein K02078 acpP; acyl carrier protein
D RAK1035_3472 Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D RAK1035_3135 3-oxoacyl-acyl-carrier-protein synthase, KASIII K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D RAK1035_3807 3-oxoacyl-acyl-carrier-protein synthase, KASI K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D RAK1035_2262 3-oxoacyl-acyl-carrier-protein synthase, KASII K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D RAK1035_3143 Malonyl CoA-acyl carrier protein transacylase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D RAK1035_1523 Toluenesulfonate zinc-independent alcohol dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RAK1035_2790 Oxidoreductase, short chain dehydrogenase/reductase family K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RAK1035_3471 3-oxoacyl-acyl-carrier protein reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RAK1035_0045 3-hydroxyacyl-acyl-carrier-protein dehydratase, FabA form K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D RAK1035_3058 3-hydroxyacyl-acyl-carrier-protein dehydratase, FabZ form K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D RAK1035_2688 Enoyl-acyl-carrier-protein reductase, NADH K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D RAK1035_3806 Enoyl-acyl-carrier-protein reductase, NADH K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D RAK1035_4104 Enoyl-acyl-carrier-protein reductase, NADH K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D RAK1035_0378 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:rok00071]
D RAK1035_0792 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAK1035_0815 Acetyl-CoA acetyltransferase of ethylmalonyl-CoA pathway K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAK1035_1340 Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAK1035_1986 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAK1035_0791 Enoyl-CoA hydratase, isoleucine degradation K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D RAK1035_2582 Enoyl-CoA hydratase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D RAK1035_0488 Acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D RAK1035_0984 Butyryl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D RAK1035_1991 Butyryl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D RAK1035_0794 Butyryl-CoA dehydrogenase K00255 ACADL; long-chain-acyl-CoA dehydrogenase [EC:1.3.8.8]
D RAK1035_2996 Glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D RAK1035_0378 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D RAK1035_1884 Alkane-1 monooxygenase K00496 alkB1_2; alkane 1-monooxygenase [EC:1.14.15.3]
D RAK1035_2496 Alkane-1 monooxygenase K00496 alkB1_2; alkane 1-monooxygenase [EC:1.14.15.3]
D RAK1035_1873 Ferredoxin reductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D RAK1035_0835 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D RAK1035_1699 S-(hydroxymethyl) glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D RAK1035_0502 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RAK1035_1522 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00074 Mycolic acid biosynthesis [PATH:rok00074]
D RAK1035_0282 Holo-acyl-carrier protein synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D RAK1035_2835 Acyl carrier protein K02078 acpP; acyl carrier protein
D RAK1035_2952 Acyl carrier protein, putative K02078 acpP; acyl carrier protein
D RAK1035_3470 Acyl carrier protein K02078 acpP; acyl carrier protein
D RAK1035_3472 Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis [PATH:rok00121]
D RAK1035_0580 7-alpha-hydroxysteroid dehydrogenase K00076 hdhA; 7-alpha-hydroxysteroid dehydrogenase [EC:1.1.1.159]
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:rok00561]
D RAK1035_0699 D-glycerate 2-kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D RAK1035_0502 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RAK1035_1522 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RAK1035_0460 Glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D RAK1035_1353 Acyltransferase family protein associated with ethylmalonyl-CoA pathway K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D RAK1035_3134 Phosphate:acyl-ACP acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D RAK1035_0431 Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D RAK1035_0664 Acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 00564 Glycerophospholipid metabolism [PATH:rok00564]
D RAK1035_1077 Glycerol-3-phosphate dehydrogenase, NAD(P)+ K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D RAK1035_0467 Aerobic glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D RAK1035_1353 Acyltransferase family protein associated with ethylmalonyl-CoA pathway K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D RAK1035_0431 Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D RAK1035_0664 Acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D RAK1035_0077 Lysophospholipase K01048 pldB; lysophospholipase [EC:3.1.1.5]
D RAK1035_3836 Phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D RAK1035_3861 Phosphatidylcholine synthase K01004 pcs; phosphatidylcholine synthase [EC:2.7.8.24]
D RAK1035_0647 CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D RAK1035_0648 Phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D RAK1035_1423 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D RAK1035_3033 Phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
D RAK1035_2546 Arylesterase precursor K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D RAK1035_2948 GDSL-like lipase/acylhydrolase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:rok00230]
D RAK1035_2926 Tellurite resistance protein TrgB K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D RAK1035_0191 Phosphoglucosamine mutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D RAK1035_2003 Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D RAK1035_4096 Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D RAK1035_3017 Amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D RAK1035_3852 Phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D RAK1035_2895 Phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D RAK1035_3514 Phosphoribosylformylglycinamidine synthase, synthetase subunit K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]
D RAK1035_2906 Phosphoribosylformylglycinamidine synthase, PurS subunit K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3]
D RAK1035_2907 Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D RAK1035_2894 Phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D RAK1035_1441 Phosphoribosylaminoimidazole carboxylase ATPase subunit K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D RAK1035_1442 Phosphoribosylaminoimidazole carboxylase catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D RAK1035_2905 Phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D RAK1035_3483 Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D RAK1035_1900 IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D RAK1035_2706 Adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D RAK1035_3021 5-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D RAK1035_0511 hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D RAK1035_3036 Hypoxanthine-guanine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D RAK1035_3115 Inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D RAK1035_2336 Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D RAK1035_1113 Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D RAK1035_2686 Xanthine-guanine phosphoribosyltransferase K00769 gpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D RAK1035_0638 Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A K13481 xdhA; xanthine dehydrogenase small subunit [EC:1.17.1.4]
D RAK1035_0640 Xanthine dehydrogenase, molybdenum binding subunit K13482 xdhB; xanthine dehydrogenase large subunit [EC:1.17.1.4]
D RAK1035_2824 GMP synthase, glutamine-hydrolyzing K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D RAK1035_2670 Guanine deaminase K01487 guaD; guanine deaminase [EC:3.5.4.3]
D RAK1035_2986 Guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D RAK1035_0630 Ribonucleotide reductase of class II (coenzyme B12-dependent) K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D RAK1035_2692 Ribonucleotide reductase of class II (coenzyme B12-dependent) K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D RAK1035_3154 Deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D RAK1035_1001 putative hydrolase of HD superfamily K06952 yfdR; 5'-nucleotidase [EC:3.1.3.89]
D RAK1035_0286 GTP pyrophosphokinase, (p)ppGpp synthetase II K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D RAK1035_0003 Exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D RAK1035_2857 Exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D RAK1035_3053 Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D RAK1035_0777 AMP nucleosidase K01241 amn; AMP nucleosidase [EC:3.2.2.4]
D RAK1035_1507 Adenine deaminase K01486 ade; adenine deaminase [EC:3.5.4.2]
D RAK1035_1650 2',3'-cyclic-nucleotide 2'-phosphodiesterase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D RAK1035_0542 Ser/Thr protein phosphatase family protein K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D RAK1035_0531 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D RAK1035_1218 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D RAK1035_3520 Nucleoside triphosphate pyrophosphohydrolase MazG K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D RAK1035_0768 3',5'-cyclic-nucleotide phosphodiesterase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
D RAK1035_3696 3',5'-cyclic-nucleotide phosphodiesterase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
D RAK1035_1446 Sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D RAK1035_0543 Transthyretin family protein K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
D RAK1035_0544 Uricase (urate oxidase) K13485 PRHOXNB; 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase [EC:4.1.1.97]
D RAK1035_0451 Hydantoin racemase K16841 hpxA; allantoin racemase [EC:5.1.99.3]
D RAK1035_1597 Hydantoin racemase K16841 hpxA; allantoin racemase [EC:5.1.99.3]
D RAK1035_0449 Uricase K16842 hpxB; allantoinase [EC:3.5.2.5]
D RAK1035_0447 Ureidoglycine aminohydrolase K14977 ylbA; (S)-ureidoglycine aminohydrolase [EC:3.5.3.26]
D RAK1035_0448 Ureidoglycolate hydrolase K01483 allA; ureidoglycolate lyase [EC:4.3.2.3]
D RAK1035_0102 Urease alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D RAK1035_0598 Urease alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D RAK1035_0599 Urease beta subunit K01429 ureB; urease subunit beta [EC:3.5.1.5]
D RAK1035_0601 Urease gamma subunit K01430 ureA; urease subunit gamma [EC:3.5.1.5]
D RAK1035_0103 Urease beta subunit K14048 ureAB; urease subunit gamma/beta [EC:3.5.1.5]
D RAK1035_1054 Gamma-glutamyltranspeptidase K22602 hpxW; oxamate amidohydrolase [EC:3.5.1.126]
D RAK1035_4114 Carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00240 Pyrimidine metabolism [PATH:rok00240]
D RAK1035_0356 Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D RAK1035_2277 Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D RAK1035_0436 Aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D RAK1035_0432 Dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D RAK1035_3399 Dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D RAK1035_0714 Dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D RAK1035_2794 Orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D RAK1035_0954 Orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D RAK1035_3839 Uridine monophosphate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D RAK1035_2336 Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D RAK1035_3520 Nucleoside triphosphate pyrophosphohydrolase MazG K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D RAK1035_1122 Septum formation protein Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D RAK1035_1849 Septum formation protein Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D RAK1035_3055 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D RAK1035_0716 Cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D RAK1035_3021 5-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D RAK1035_2652 Uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D RAK1035_1650 2',3'-cyclic-nucleotide 2'-phosphodiesterase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D RAK1035_0542 Ser/Thr protein phosphatase family protein K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D RAK1035_0993 Cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D RAK1035_1059 Cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D RAK1035_3138 Deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D RAK1035_0630 Ribonucleotide reductase of class II (coenzyme B12-dependent) K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D RAK1035_2692 Ribonucleotide reductase of class II (coenzyme B12-dependent) K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D RAK1035_1001 putative hydrolase of HD superfamily K06952 yfdR; 5'-nucleotidase [EC:3.1.3.89]
D RAK1035_2307 Thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D RAK1035_0188 Deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D RAK1035_4097 Thymidine phosphorylase K00758 deoA; thymidine phosphorylase [EC:2.4.2.4]
D RAK1035_3401 Thymidylate synthase thyX K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D RAK1035_0505 Pyridine nucleotide-disulfide oxidoreductase associated with reductive pyrimidine catabolism K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1]
D RAK1035_0504 Dihydropyrimidine dehydrogenase, NADP+ K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1]
D RAK1035_1677 Dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D RAK1035_1678 Beta-ureidopropionase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:rok00250]
D RAK1035_3410 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RAK1035_1706 Aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D RAK1035_2758 Aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D RAK1035_2930 Aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D RAK1035_2764 L-asparaginase I, cytoplasmic K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D RAK1035_1251 Serine--glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D RAK1035_2341 Serine--glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D RAK1035_2561 Serine--glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D RAK1035_1025 Alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D RAK1035_2160 Aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D RAK1035_2765 Aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D RAK1035_1105 Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D RAK1035_1232 Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D RAK1035_3053 Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D RAK1035_3483 Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D RAK1035_0436 Aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D RAK1035_1403 Aldehyde dehydrogenase B K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D RAK1035_1017 Glutamate synthase, NADPH large chain K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D RAK1035_1016 Glutamate synthase, NADPH small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D RAK1035_3816 NAD-specific glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D RAK1035_2147 Proline dehydrogenase (Proline oxidase) K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D RAK1035_0947 Glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RAK1035_1865 Glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RAK1035_2880 Glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RAK1035_3437 Glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RAK1035_3439 Glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RAK1035_3454 Glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RAK1035_0356 Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D RAK1035_2277 Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D RAK1035_3708 Glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D RAK1035_2907 Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D RAK1035_0867 Glucosamine--fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D RAK1035_3017 Amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:rok00260]
D RAK1035_0061 Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RAK1035_1010 Aspartokinase associated with ectoine biosynthesis K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RAK1035_1242 Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D RAK1035_3825 Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D RAK1035_0305 Threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D RAK1035_0444 Low-specificity L-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D RAK1035_1803 Low-specificity L-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D RAK1035_0118 Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RAK1035_2660 Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RAK1035_1251 Serine--glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D RAK1035_2341 Serine--glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D RAK1035_2561 Serine--glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D RAK1035_0425 D-3-phosphoglycerate dehydrogenase K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D RAK1035_0699 D-glycerate 2-kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D RAK1035_3720 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D RAK1035_1337 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D RAK1035_1336 Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D RAK1035_1335 Phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D RAK1035_1022 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D RAK1035_1023 L-threonine 3-dehydrogenase K00060 tdh; threonine 3-dehydrogenase [EC:1.1.1.103]
D RAK1035_3652 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37]
D RAK1035_3763 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37]
D RAK1035_2541 Glycine dehydrogenase, decarboxylating (glycine cleavage system P protein) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D RAK1035_2452 Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D RAK1035_2525 Aminomethyltransferase (glycine cleavage system T protein) K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D RAK1035_2878 Sarcosine oxidase alpha subunit K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D RAK1035_2887 Sarcosine oxidase alpha subunit K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D RAK1035_0666 Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RAK1035_3780 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RAK1035_2526 Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D RAK1035_0496 Creatinase K08688 E3.5.3.3; creatinase [EC:3.5.3.3]
D RAK1035_1299 Creatinase K08688 E3.5.3.3; creatinase [EC:3.5.3.3]
D RAK1035_0647 CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D RAK1035_2236 Choline dehydrogenase K00108 betA; choline dehydrogenase [EC:1.1.99.1]
D RAK1035_0653 Sarcosine dehydrogenase K00315 DMGDH; dimethylglycine dehydrogenase [EC:1.5.8.4]
D RAK1035_1554 Dimethylglycine dehydrogenase K00315 DMGDH; dimethylglycine dehydrogenase [EC:1.5.8.4]
D RAK1035_1955 Sarcosine dehydrogenase K00315 DMGDH; dimethylglycine dehydrogenase [EC:1.5.8.4]
D RAK1035_3049 Sarcosine dehydrogenase K00315 DMGDH; dimethylglycine dehydrogenase [EC:1.5.8.4]
D RAK1035_3051 Sarcosine dehydrogenase K00315 DMGDH; dimethylglycine dehydrogenase [EC:1.5.8.4]
D RAK1035_0017 Sarcosine oxidase alpha subunit K00302 soxA; sarcosine oxidase, subunit alpha [EC:1.5.3.24 1.5.3.1]
D RAK1035_0019 Sarcosine oxidase beta subunit K00303 soxB; sarcosine oxidase, subunit beta [EC:1.5.3.24 1.5.3.1]
D RAK1035_0016 Sarcosine oxidase gamma subunit K00305 soxG; sarcosine oxidase, subunit gamma [EC:1.5.3.24 1.5.3.1]
D RAK1035_0018 Sarcosine oxidase delta subunit K00304 soxD; sarcosine oxidase, subunit delta [EC:1.5.3.24 1.5.3.1]
D RAK1035_0712 L-serine dehydratase, beta subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D RAK1035_0052 Threonine dehydratase, catabolic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D RAK1035_0497 Threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D RAK1035_0629 Threonine dehydratase, catabolic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D RAK1035_0973 Threonine dehydratase, catabolic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D RAK1035_1102 Threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D RAK1035_2798 Tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D RAK1035_3523 Tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D RAK1035_1008 Diaminobutyrate-pyruvate aminotransferase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D RAK1035_1007 L-2,4-diaminobutyric acid acetyltransferase K06718 ectA; L-2,4-diaminobutyric acid acetyltransferase [EC:2.3.1.178]
D RAK1035_1009 L-ectoine synthase K06720 ectC; L-ectoine synthase [EC:4.2.1.108]
D RAK1035_0974 Xaa-Pro aminopeptidase K15783 doeA; ectoine hydrolase [EC:3.5.4.44]
D RAK1035_0969 Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase K15785 doeD; L-2,4-diaminobutyrate transaminase [EC:2.6.1.76]
D RAK1035_0970 Aldehyde dehydrogenase B K15786 doeC; aspartate-semialdehyde dehydrogenase [EC:1.2.1.-]
C 00270 Cysteine and methionine metabolism [PATH:rok00270]
D RAK1035_0026 Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D RAK1035_2927 Cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D RAK1035_2066 Bifunctional PLP-dependent enzyme K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D RAK1035_2854 Pterin-binding enzyme domain protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D RAK1035_2903 Betaine--homocysteine S-methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D RAK1035_3795 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D RAK1035_2707 5'-methylthioadenosine phosphorylase K00772 mtaP; 5'-methylthioadenosine phosphorylase [EC:2.4.2.28]
D RAK1035_0511 hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D RAK1035_1988 Hypothetical protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D RAK1035_1817 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RAK1035_3649 Modification methylase HhaI K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RAK1035_1003 Adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D RAK1035_0061 Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RAK1035_1010 Aspartokinase associated with ectoine biosynthesis K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RAK1035_1242 Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D RAK1035_3825 Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D RAK1035_2819 Homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D RAK1035_3182 Cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D RAK1035_0034 O-acetylhomoserine sulfhydrylase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D RAK1035_2504 O-acetylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
D RAK1035_0214 Branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RAK1035_1032 Aminotransferase, class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RAK1035_3735 Glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D RAK1035_0233 Glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D RAK1035_3410 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RAK1035_1706 Aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D RAK1035_1707 Thiosulfate sulfurtransferase, rhodanese K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D RAK1035_3026 Rhodanese-related sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D RAK1035_0673 Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D RAK1035_2264 Malate dehydrogenase K16844 comC; (2R)-3-sulfolactate dehydrogenase (NADP+) [EC:1.1.1.338]
D RAK1035_1044 Pyridoxal phosphate-dependent deaminase, putative K17950 cuyA; L-cysteate sulfo-lyase [EC:4.4.1.25]
D RAK1035_1283 Pyridoxal phosphate-dependent deaminase, putative K17950 cuyA; L-cysteate sulfo-lyase [EC:4.4.1.25]
D RAK1035_0712 L-serine dehydratase, beta subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D RAK1035_1337 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D RAK1035_1336 Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:rok00280]
D RAK1035_0214 Branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RAK1035_1032 Aminotransferase, class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RAK1035_0952 Leucine dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9]
D RAK1035_0666 Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RAK1035_3780 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RAK1035_0488 Acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D RAK1035_0984 Butyryl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D RAK1035_1991 Butyryl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D RAK1035_3101 Isovaleryl-CoA dehydrogenase K00253 IVD; isovaleryl-CoA dehydrogenase [EC:1.3.8.4]
D RAK1035_0791 Enoyl-CoA hydratase, isoleucine degradation K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D RAK1035_3912 Propionyl-CoA carboxylase biotin-containing subunit K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3]
D RAK1035_3919 Propionyl-CoA carboxylase carboxyl transferase subunit K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D RAK1035_0473 Methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D RAK1035_3908 Methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D RAK1035_1182 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D RAK1035_2358 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D RAK1035_2420 Methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D RAK1035_0502 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RAK1035_1522 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RAK1035_1715 Acetoacetyl-CoA synthetase, leucine K18661 matB; malonyl-CoA/methylmalonyl-CoA synthetase [EC:6.2.1.76 6.2.1.-]
D RAK1035_3093 Methylcrotonyl-CoA carboxylase biotin-containing subunit K01968 MCCC1; 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4]
D RAK1035_3095 Methylcrotonyl-CoA carboxylase carboxyl transferase subunit K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4]
D RAK1035_3090 Methylglutaconyl-CoA hydratase K13766 liuC; methylglutaconyl-CoA hydratase [EC:4.2.1.18]
D RAK1035_3091 Hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D RAK1035_0317 Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D RAK1035_0318 Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D RAK1035_0792 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAK1035_0815 Acetyl-CoA acetyltransferase of ethylmalonyl-CoA pathway K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAK1035_1340 Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAK1035_1986 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAK1035_3511 2-hydroxy-3-oxopropionate reductase
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:rok00290]
D RAK1035_0052 Threonine dehydratase, catabolic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D RAK1035_0497 Threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D RAK1035_0629 Threonine dehydratase, catabolic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D RAK1035_0973 Threonine dehydratase, catabolic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D RAK1035_1102 Threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D RAK1035_0220 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D RAK1035_0221 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D RAK1035_0224 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D RAK1035_0915 Hypothetical protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RAK1035_1726 Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RAK1035_2163 Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RAK1035_2733 Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RAK1035_2732 Acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D RAK1035_2269 Ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D RAK1035_3865 Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D RAK1035_0214 Branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RAK1035_1032 Aminotransferase, class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RAK1035_0952 Leucine dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9]
D RAK1035_2443 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D RAK1035_3356 (R)-citramalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:rok00300]
D RAK1035_3825 Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D RAK1035_0061 Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RAK1035_1010 Aspartokinase associated with ectoine biosynthesis K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RAK1035_1242 Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D RAK1035_1448 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D RAK1035_1904 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D RAK1035_3567 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D RAK1035_3349 Acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D RAK1035_0364 N-succinyl-L,L-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D RAK1035_0657 Acetylornithine deacetylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D RAK1035_1976 Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D RAK1035_1235 Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D RAK1035_3690 Saccharopine dehydrogenase, NAD+, L-lysine-forming K00290 LYS1; saccharopine dehydrogenase (NAD+, L-lysine forming) [EC:1.5.1.7]
D RAK1035_2484 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D RAK1035_2485 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:rok00310]
D RAK1035_3690 Saccharopine dehydrogenase, NAD+, L-lysine-forming K00290 LYS1; saccharopine dehydrogenase (NAD+, L-lysine forming) [EC:1.5.1.7]
D RAK1035_0668 Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D RAK1035_0666 Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RAK1035_3780 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RAK1035_2996 Glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D RAK1035_0791 Enoyl-CoA hydratase, isoleucine degradation K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D RAK1035_0792 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAK1035_0815 Acetyl-CoA acetyltransferase of ethylmalonyl-CoA pathway K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAK1035_1340 Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAK1035_1986 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAK1035_1403 Aldehyde dehydrogenase B K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D RAK1035_1034 D-alanine aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D RAK1035_2604 Ureidoglycolate/malate/sulfolactate dehydrogenase family K13609 dpkA; delta1-piperideine-2-carboxylate reductase [EC:1.5.1.21]
D RAK1035_2997 L-pipecolate oxidase K26065 amaA; L-pipecolate oxidase
D RAK1035_0502 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RAK1035_1522 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00220 Arginine biosynthesis [PATH:rok00220]
D RAK1035_3348 Ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D RAK1035_4115 Ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D RAK1035_1105 Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D RAK1035_1232 Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D RAK1035_2840 Arginase K01476 rocF; arginase [EC:3.5.3.1]
D RAK1035_0102 Urease alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D RAK1035_0598 Urease alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D RAK1035_0599 Urease beta subunit K01429 ureB; urease subunit beta [EC:3.5.1.5]
D RAK1035_0601 Urease gamma subunit K01430 ureA; urease subunit gamma [EC:3.5.1.5]
D RAK1035_0103 Urease beta subunit K14048 ureAB; urease subunit gamma/beta [EC:3.5.1.5]
D RAK1035_4116 Arginine deiminase K01478 arcA; arginine deiminase [EC:3.5.3.6]
D RAK1035_3708 Glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D RAK1035_2907 Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D RAK1035_0947 Glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RAK1035_1865 Glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RAK1035_2880 Glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RAK1035_3437 Glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RAK1035_3439 Glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RAK1035_3454 Glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RAK1035_0356 Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D RAK1035_2277 Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D RAK1035_4114 Carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D RAK1035_3816 NAD-specific glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D RAK1035_3410 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RAK1035_1706 Aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D RAK1035_1306 Glutamate N-acetyltransferase K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D RAK1035_1762 Acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D RAK1035_3384 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D RAK1035_3349 Acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D RAK1035_2256 Acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
D RAK1035_3793 Acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
C 00330 Arginine and proline metabolism [PATH:rok00330]
D RAK1035_0494 Creatinine amidohydrolase K01470 E3.5.2.10; creatinine amidohydrolase [EC:3.5.2.10]
D RAK1035_0993 Cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D RAK1035_1059 Cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D RAK1035_0496 Creatinase K08688 E3.5.3.3; creatinase [EC:3.5.3.3]
D RAK1035_1299 Creatinase K08688 E3.5.3.3; creatinase [EC:3.5.3.3]
D RAK1035_1864 Arginine decarboxylase K01584 adiA; arginine decarboxylase [EC:4.1.1.19]
D RAK1035_3518 Agmatinase K01480 speB; agmatinase [EC:3.5.3.11]
D RAK1035_0038 Ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D RAK1035_3371 Carboxynorspermidine decarboxylase K13747 nspC; carboxynorspermidine decarboxylase [EC:4.1.1.96]
D RAK1035_1168 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase K12256 spuC; putrescine---pyruvate transaminase [EC:2.6.1.113]
D RAK1035_0502 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RAK1035_1522 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RAK1035_0146 Aspartate aminotransferase K12252 aruH; arginine:pyruvate transaminase [EC:2.6.1.84]
D RAK1035_3857 putative acetolactate synthase large subunit K12253 aruI; 5-guanidino-2-oxopentanoate decarboxylase [EC:4.1.1.75]
D RAK1035_0099 Aliphatic amidase AmiE K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RAK1035_1050 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RAK1035_1646 Aliphatic amidase AmiE K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RAK1035_3440 Glycine/D-amino acid oxidase K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-]
D RAK1035_2840 Arginase K01476 rocF; arginase [EC:3.5.3.1]
D RAK1035_0692 Pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D RAK1035_3502 Pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D RAK1035_2147 Proline dehydrogenase (Proline oxidase) K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D RAK1035_2839 Ornithine cyclodeaminase K01750 ocd; ornithine cyclodeaminase [EC:4.3.1.12]
D RAK1035_3211 Glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D RAK1035_3210 Gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D RAK1035_1081 Proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D RAK1035_3410 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RAK1035_1706 Aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D RAK1035_1034 D-alanine aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D RAK1035_2603 2-methylaconitate racemase K22548 lhpL; trans-L-3-hydroxyproline dehydratase [EC:4.2.1.77]
D RAK1035_2606 2-Methylcitrate dehydratase AcnD K09123 lhpI; cis-L-3-hydroxyproline dehydratase [EC:4.2.1.171]
D RAK1035_2451 Omega-amino acid--pyruvate aminotransferase
C 00340 Histidine metabolism [PATH:rok00340]
D RAK1035_0633 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D RAK1035_0634 ATP phosphoribosyltransferase regulatory subunit K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit
D RAK1035_3703 Phosphoribosyl-ATP pyrophosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]
D RAK1035_2808 Phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D RAK1035_2680 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D RAK1035_3706 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D RAK1035_3709 Imidazole glycerol phosphate synthase amidotransferase subunit K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D RAK1035_3704 Imidazole glycerol phosphate synthase cyclase subunit K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D RAK1035_3710 Imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D RAK1035_0203 Biosynthetic Aromatic amino acid aminotransferase beta K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RAK1035_2552 Histidinol-phosphate aminotransferase, Biosynthetic Aromatic amino acid aminotransferase beta K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RAK1035_0419 Histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D RAK1035_1574 Histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D RAK1035_1585 Histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D RAK1035_1576 Urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49]
D RAK1035_1573 Imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7]
D RAK1035_1572 Formiminoglutamic iminohydrolase K05603 hutF; formimidoylglutamate deiminase [EC:3.5.3.13]
D RAK1035_0546 N-formylglutamate deformylase K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68]
D RAK1035_0502 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RAK1035_1522 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00350 Tyrosine metabolism [PATH:rok00350]
D RAK1035_3410 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RAK1035_1706 Aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D RAK1035_0203 Biosynthetic Aromatic amino acid aminotransferase beta K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RAK1035_2552 Histidinol-phosphate aminotransferase, Biosynthetic Aromatic amino acid aminotransferase beta K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RAK1035_0835 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D RAK1035_1699 S-(hydroxymethyl) glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D RAK1035_1432 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase K02510 hpaI; 4-hydroxy-2-oxoheptanedioate aldolase [EC:4.1.2.52]
D RAK1035_1403 Aldehyde dehydrogenase B K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D RAK1035_0272 Fumarylacetoacetase K16165 nagK; fumarylpyruvate hydrolase [EC:3.7.1.20]
C 00360 Phenylalanine metabolism [PATH:rok00360]
D RAK1035_1421 Phenylacetate-coenzyme A ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30]
D RAK1035_3378 Enoyl-CoA hydratase K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18]
D RAK1035_2133 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D RAK1035_3410 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RAK1035_1706 Aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D RAK1035_0203 Biosynthetic Aromatic amino acid aminotransferase beta K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RAK1035_2552 Histidinol-phosphate aminotransferase, Biosynthetic Aromatic amino acid aminotransferase beta K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RAK1035_3274 D-amino acid dehydrogenase small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D RAK1035_1034 D-alanine aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D RAK1035_0566 Catalase K03782 katG; catalase-peroxidase [EC:1.11.1.21]
D RAK1035_0099 Aliphatic amidase AmiE K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RAK1035_1050 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RAK1035_1646 Aliphatic amidase AmiE K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RAK1035_1873 Ferredoxin reductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D RAK1035_1245 2-keto-4-pentenoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
C 00380 Tryptophan metabolism [PATH:rok00380]
D RAK1035_0668 Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D RAK1035_0666 Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RAK1035_3780 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RAK1035_2996 Glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D RAK1035_0791 Enoyl-CoA hydratase, isoleucine degradation K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D RAK1035_0792 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAK1035_0815 Acetyl-CoA acetyltransferase of ethylmalonyl-CoA pathway K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAK1035_1340 Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAK1035_1986 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAK1035_0502 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RAK1035_1522 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RAK1035_0576 Cobalt-containing nitrile hydratase subunit alpha K01721 nthA; nitrile hydratase subunit alpha [EC:4.2.1.84]
D RAK1035_0574 putative nitrile hydratase subunit beta protein K20807 nthB; nitrile hydratase subunit beta [EC:4.2.1.84]
D RAK1035_0575 Nitrile hydratase beta subunit protein K20807 nthB; nitrile hydratase subunit beta [EC:4.2.1.84]
D RAK1035_0099 Aliphatic amidase AmiE K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RAK1035_1050 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RAK1035_1646 Aliphatic amidase AmiE K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RAK1035_2177 Catalase K03781 katE; catalase [EC:1.11.1.6]
D RAK1035_0566 Catalase K03782 katG; catalase-peroxidase [EC:1.11.1.21]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:rok00400]
D RAK1035_2983 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase II K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D RAK1035_3186 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D RAK1035_2999 3-dehydroquinate dehydratase II K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D RAK1035_1123 Shikimate 5-dehydrogenase I alpha K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D RAK1035_3187 Shikimate kinase I K00891 aroK; shikimate kinase [EC:2.7.1.71]
D RAK1035_1503 5-Enolpyruvylshikimate-3-phosphate synthase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D RAK1035_1741 Chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D RAK1035_2683 Anthranilate synthase, aminase component K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D RAK1035_2677 Anthranilate synthase, amidotransferase component, Para-aminobenzoate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D RAK1035_2676 Anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D RAK1035_3526 Phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D RAK1035_2675 Indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D RAK1035_2798 Tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D RAK1035_3523 Tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D RAK1035_0858 Chorismate mutase I K04092 tyrA1; chorismate mutase [EC:5.4.99.5]
D RAK1035_0204 Cyclohexadienyl dehydrogenase K00220 tyrC; cyclohexadieny/prephenate dehydrogenase [EC:1.3.1.43 1.3.1.12]
D RAK1035_1653 Prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D RAK1035_3410 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RAK1035_1706 Aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D RAK1035_0203 Biosynthetic Aromatic amino acid aminotransferase beta K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RAK1035_2552 Histidinol-phosphate aminotransferase, Biosynthetic Aromatic amino acid aminotransferase beta K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:rok00410]
D RAK1035_0502 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RAK1035_1522 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RAK1035_0656 Pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D RAK1035_0505 Pyridine nucleotide-disulfide oxidoreductase associated with reductive pyrimidine catabolism K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1]
D RAK1035_0504 Dihydropyrimidine dehydrogenase, NADP+ K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1]
D RAK1035_1677 Dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D RAK1035_1678 Beta-ureidopropionase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D RAK1035_0791 Enoyl-CoA hydratase, isoleucine degradation K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D RAK1035_1714 Malonyl-CoA decarboxylase K01578 MLYCD; malonyl-CoA decarboxylase [EC:4.1.1.9]
D RAK1035_2420 Methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
C 00430 Taurine and hypotaurine metabolism [PATH:rok00430]
D RAK1035_1530 Gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RAK1035_1983 Gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RAK1035_0806 Taurine--pyruvate aminotransferase K03851 tpa; taurine-pyruvate aminotransferase [EC:2.6.1.77]
D RAK1035_1025 Alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D RAK1035_0731 Sulfoacetaldehyde acetyltransferase K03852 xsc; sulfoacetaldehyde acetyltransferase [EC:2.3.3.15]
D RAK1035_0732 Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D RAK1035_0766 Long-chain-fatty-acid--CoA ligase K26005 sauT; sulfoacetate-CoA ligase [EC:6.2.1.-]
D RAK1035_0765 Aldehyde dehydrogenase K15515 sauS; sulfoacetaldehyde dehydrogenase [EC:1.2.1.81]
C 00440 Phosphonate and phosphinate metabolism [PATH:rok00440]
D RAK1035_0263 PhnI protein K06164 phnI; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI [EC:2.7.8.37]
D RAK1035_0261 PhnG protein K06166 phnG; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnG [EC:2.7.8.37]
D RAK1035_0262 PhnH protein K06165 phnH; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnH [EC:2.7.8.37]
D RAK1035_0268 Phosphonates transport ATP-binding protein PhnL K05780 phnL; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnL [EC:2.7.8.37]
D RAK1035_0271 Metal-dependent hydrolase involved in phosphonate metabolism K06162 phnM; alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase [EC:3.6.1.63]
D RAK1035_0759 Metal-dependent hydrolase involved in phosphonate metabolism K06162 phnM; alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase [EC:3.6.1.63]
D RAK1035_1724 Amidohydrolase 3 K06162 phnM; alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase [EC:3.6.1.63]
D RAK1035_0265 PhnJ protein K06163 phnJ; alpha-D-ribose 1-methylphosphonate 5-phosphate C-P lyase [EC:4.7.1.1]
D RAK1035_2310 Metal-dependent hydrolase of the beta-lactamase superfamily I K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]
C 00450 Selenocompound metabolism [PATH:rok00450]
D RAK1035_3182 Cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D RAK1035_2066 Bifunctional PLP-dependent enzyme K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D RAK1035_2854 Pterin-binding enzyme domain protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D RAK1035_2903 Betaine--homocysteine S-methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D RAK1035_3037 Cysteine desulfurase, SufS subfamily K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D RAK1035_0833 Thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D RAK1035_1446 Sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D RAK1035_2865 NADH dehydrogenase-like protein K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D RAK1035_0337 Methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:rok00460]
D RAK1035_1530 Gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RAK1035_1983 Gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RAK1035_2764 L-asparaginase I, cytoplasmic K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D RAK1035_0118 Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RAK1035_2660 Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:rok00470]
D RAK1035_3008 Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D RAK1035_1034 D-alanine aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D RAK1035_3894 D-alanine--D-alanine ligase B K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RAK1035_3708 Glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D RAK1035_2907 Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D RAK1035_3385 Glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D RAK1035_0009 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D RAK1035_1036 Protein often near L-alanine-DL-glutamate epimerase (cell wall recycling) K26272 dgcN; D-glutamate N-acetyltransferase [EC:2.3.1.312]
D RAK1035_1035 Mandelate racemase/muconate lactonizing enzyme family protein K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25]
D RAK1035_2758 Aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D RAK1035_2930 Aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D RAK1035_1976 Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D RAK1035_1235 Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D RAK1035_1254 Oxidoreductase, FAD-binding K19746 dauA; D-arginine dehydrogenase [EC:1.4.99.6]
D RAK1035_2608 4-hydroxyproline epimerase K12658 lhpA; 4-hydroxyproline epimerase [EC:5.1.1.8]
D RAK1035_2607 1-pyrroline-4-hydroxy-2-carboxylate deaminase K21062 lhpC; 1-pyrroline-4-hydroxy-2-carboxylate deaminase [EC:3.5.4.22]
D RAK1035_2614 Ketoglutarate semialdehyde dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
D RAK1035_3274 D-amino acid dehydrogenase small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
C 00480 Glutathione metabolism [PATH:rok00480]
D RAK1035_1530 Gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RAK1035_1983 Gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RAK1035_0180 Cation transport protein chaC K07232 CHAC; glutathione-specific gamma-glutamylcyclotransferase [EC:4.3.2.7]
D RAK1035_1133 5-oxoprolinase K01469 OPLAH; 5-oxoprolinase (ATP-hydrolysing) [EC:3.5.2.9]
D RAK1035_3735 Glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D RAK1035_0233 Glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D RAK1035_0788 Peptidase B K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D RAK1035_2323 Cytosol aminopeptidase PepA K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D RAK1035_0131 Membrane alanine aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D RAK1035_0182 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RAK1035_0711 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RAK1035_0793 Maleylacetoacetate isomerase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RAK1035_1019 Glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RAK1035_2020 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RAK1035_3092 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RAK1035_3305 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RAK1035_3689 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RAK1035_0237 Glutathione reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D RAK1035_1450 Isocitrate dehydrogenase, NADP K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D RAK1035_3347 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D RAK1035_1783 Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D RAK1035_3413 Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D RAK1035_1178 Glutathione peroxidase family protein K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D RAK1035_1872 Antioxidant, AhpC/Tsa family K24138 prx3; glutaredoxin/glutathione-dependent peroxiredoxin [EC:1.11.1.25 1.11.1.27]
D RAK1035_0038 Ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D RAK1035_1878 Glutathione S-transferase family protein
B
B 09107 Glycan biosynthesis and metabolism
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:rok00520]
D RAK1035_3184 Anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D RAK1035_0899 putative phosphotransferase related to Ser/Thr protein kinases K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221]
D RAK1035_0898 Nucleotidyltransferase K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99]
D RAK1035_0866 N-acetylglucosamine-1-phosphate uridyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D RAK1035_0417 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D RAK1035_3895 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D RAK1035_3150 Beta N-acetyl-glucosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D RAK1035_0721 Phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D RAK1035_0867 Glucosamine--fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D RAK1035_3415 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RAK1035_3338 Mannose-1-phosphate guanylyltransferase (GDP) K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D RAK1035_2065 UDP-glucuronate 5'-epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D RAK1035_1433 Glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D RAK1035_0191 Phosphoglucosamine mutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D RAK1035_0998 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D RAK1035_0722 UDP-glucose dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D RAK1035_0999 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RAK1035_2130 PTS system permease (IIAMan), nitrogen regulatory IIA protein K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D RAK1035_1683 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
C 00541 Biosynthesis of various nucleotide sugars [PATH:rok00541]
D RAK1035_0866 N-acetylglucosamine-1-phosphate uridyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D RAK1035_3737 Arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D RAK1035_0192 2-Keto-3-deoxy-D-manno-octulosonate-8-phosphate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D RAK1035_0997 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D RAK1035_0998 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D RAK1035_0722 UDP-glucose dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D RAK1035_1683 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RAK1035_1681 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D RAK1035_1680 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D RAK1035_1682 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D RAK1035_3338 Mannose-1-phosphate guanylyltransferase (GDP) K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D RAK1035_3327 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D RAK1035_3322 GDP-L-fucose synthetase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis [PATH:rok00540]
D RAK1035_1895 Tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D RAK1035_1894 Lipid IVA 3-deoxy-D-manno-octulosonic acid transferase, often with also K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D RAK1035_2957 Lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D RAK1035_2959 Lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
C 00542 O-Antigen repeat unit biosynthesis
C 00550 Peptidoglycan biosynthesis [PATH:rok00550]
D RAK1035_0417 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D RAK1035_3895 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D RAK1035_3897 UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D RAK1035_0009 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D RAK1035_2484 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D RAK1035_3894 D-alanine--D-alanine ligase B K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RAK1035_2485 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D RAK1035_3837 Undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D RAK1035_1015 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D RAK1035_2486 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D RAK1035_3898 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D RAK1035_1018 Monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D RAK1035_3168 Penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D RAK1035_3899 Cell division protein FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D RAK1035_0424 Rod shape-determining protein RodA K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D RAK1035_0423 Penicillin-binding protein 2 (PBP-2) K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D RAK1035_2483 Cell division protein FtsI, Peptidoglycan synthetase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D RAK1035_2306 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D RAK1035_2507 D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
C 00552 Teichoic acid biosynthesis [PATH:rok00552]
D RAK1035_1015 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:rok00543]
D RAK1035_0026 Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:rok00730]
D RAK1035_2426 Hydroxymethylpyrimidine phosphate synthase ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D RAK1035_1274 Hydroxymethylpyrimidine phosphate kinase ThiD K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D RAK1035_3045 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RAK1035_0508 Oxidoreductase, FAD-binding K03153 thiO; glycine oxidase [EC:1.4.3.19]
D RAK1035_1273 Glycine oxidase ThiO K03153 thiO; glycine oxidase [EC:1.4.3.19]
D RAK1035_2980 1-deoxy-D-xylulose 5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D RAK1035_3765 1-deoxy-D-xylulose 5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D RAK1035_1271 Thiazole biosynthesis protein ThiG K03149 thiG; thiazole synthase [EC:2.8.1.10]
D RAK1035_1270 Thiamin-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D RAK1035_3205 Thiamine-phosphate pyrophosphorylase, putative K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D RAK1035_2946 putative GTPase related to EngC K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D RAK1035_0742 Hypothetical protein K07251 thiK; thiamine kinase [EC:2.7.1.89]
D RAK1035_1388 thiamine pyrophosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2]
D RAK1035_0531 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D RAK1035_1218 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D RAK1035_1267 thiaminease II involved in salvage of thiamine pyrimidine moiety K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D RAK1035_2718 Thiaminase II K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
C 00740 Riboflavin metabolism [PATH:rok00740]
D RAK1035_3479 3,4-dihydroxy-2-butanone 4-phosphate synthase K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D RAK1035_0115 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D RAK1035_0042 Diaminohydroxyphosphoribosylaminopyrimidine deaminase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D RAK1035_3173 5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D RAK1035_0114 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D RAK1035_0153 Riboflavin synthase eubacterial/eukaryotic K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D RAK1035_2018 Hypothetical protein K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D RAK1035_0442 Riboflavin kinase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D RAK1035_0860 Cobalamin biosynthesis protein BluB K04719 bluB; 5,6-dimethylbenzimidazole synthase [EC:1.13.11.79]
D RAK1035_2926 Tellurite resistance protein TrgB K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
C 00750 Vitamin B6 metabolism [PATH:rok00750]
D RAK1035_2689 Pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D RAK1035_1336 Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D RAK1035_2328 4-hydroxythreonine-4-phosphate dehydrogenase K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D RAK1035_0284 Pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D RAK1035_0305 Threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:rok00760]
D RAK1035_1377 Aspartate dehydrogenase-like protein K06989 nadX; aspartate dehydrogenase [EC:1.4.1.21]
D RAK1035_0929 Nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D RAK1035_3021 5-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D RAK1035_2508 Nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D RAK1035_3520 Nucleoside triphosphate pyrophosphohydrolase MazG K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D RAK1035_1651 NADH pyrophosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D RAK1035_2447 NAD synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D RAK1035_3034 C-terminal domain of CinA-like protein, YdeJ K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D RAK1035_0428 Nicotinamidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D RAK1035_2659 NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D RAK1035_0958 Soluble pyridine nucleotide transhydrogenase K00322 sthA; NAD(P) transhydrogenase [EC:1.6.1.1]
D RAK1035_0123 NAD(P) transhydrogenase alpha subunit K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D RAK1035_0122 NAD(P) transhydrogenase subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
D RAK1035_3616 N-carbamoylsarcosine amidase K13995 nicF; maleamate amidohydrolase [EC:3.5.1.107]
D RAK1035_3183 Asp/Glu/Hydantoin racemase family protein K01799 nicE; maleate isomerase [EC:5.2.1.1]
D RAK1035_1403 Aldehyde dehydrogenase B K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:rok00770]
D RAK1035_0915 Hypothetical protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RAK1035_1726 Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RAK1035_2163 Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RAK1035_2733 Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RAK1035_2732 Acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D RAK1035_2269 Ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D RAK1035_3865 Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D RAK1035_0655 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D RAK1035_0656 Pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D RAK1035_3345 Pantothenate kinase type III, CoaX-like K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D RAK1035_0187 Phosphopantothenoylcysteine decarboxylase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D RAK1035_3520 Nucleoside triphosphate pyrophosphohydrolase MazG K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D RAK1035_2423 Phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D RAK1035_1124 Dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D RAK1035_0282 Holo-acyl-carrier protein synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D RAK1035_0214 Branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RAK1035_1032 Aminotransferase, class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RAK1035_0505 Pyridine nucleotide-disulfide oxidoreductase associated with reductive pyrimidine catabolism K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1]
D RAK1035_0504 Dihydropyrimidine dehydrogenase, NADP+ K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1]
D RAK1035_1677 Dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D RAK1035_1678 Beta-ureidopropionase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D RAK1035_0502 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RAK1035_1522 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00780 Biotin metabolism [PATH:rok00780]
D RAK1035_3807 3-oxoacyl-acyl-carrier-protein synthase, KASI K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D RAK1035_2262 3-oxoacyl-acyl-carrier-protein synthase, KASII K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D RAK1035_3143 Malonyl CoA-acyl carrier protein transacylase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D RAK1035_1523 Toluenesulfonate zinc-independent alcohol dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RAK1035_2790 Oxidoreductase, short chain dehydrogenase/reductase family K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RAK1035_3471 3-oxoacyl-acyl-carrier protein reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RAK1035_3058 3-hydroxyacyl-acyl-carrier-protein dehydratase, FabZ form K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D RAK1035_2688 Enoyl-acyl-carrier-protein reductase, NADH K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D RAK1035_3806 Enoyl-acyl-carrier-protein reductase, NADH K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D RAK1035_4104 Enoyl-acyl-carrier-protein reductase, NADH K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D RAK1035_2953 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D RAK1035_3346 Biotin--protein ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:rok00785]
D RAK1035_2516 Octanoate-acyl-carrier-protein-protein-N-octan oyltransferase K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D RAK1035_2832 Lipoate synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D RAK1035_0666 Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RAK1035_3780 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RAK1035_2330 Pyruvate dehydrogenase E1 component alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D RAK1035_2331 Pyruvate dehydrogenase E1 component beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D RAK1035_2332 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D RAK1035_0669 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D RAK1035_0668 Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D RAK1035_2541 Glycine dehydrogenase, decarboxylating (glycine cleavage system P protein) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D RAK1035_2452 Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D RAK1035_2525 Aminomethyltransferase (glycine cleavage system T protein) K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D RAK1035_2878 Sarcosine oxidase alpha subunit K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D RAK1035_2887 Sarcosine oxidase alpha subunit K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D RAK1035_2526 Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:rok00790]
D RAK1035_2503 GTP cyclohydrolase I type 2 K09007 folE2; GTP cyclohydrolase IB [EC:3.5.4.16]
D RAK1035_2252 Dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D RAK1035_0288 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D RAK1035_2267 Dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D RAK1035_3868 Dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D RAK1035_3479 3,4-dihydroxy-2-butanone 4-phosphate synthase K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D RAK1035_0115 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D RAK1035_0353 Para-aminobenzoate synthase, aminase component K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85]
D RAK1035_2567 6-carboxytetrahydropterin synthase, Queuosine biosynthesis QueD, PTPS-I K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D RAK1035_2121 Pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D RAK1035_2568 Queuosine Biosynthesis QueE Radical SAM K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D RAK1035_2566 Queuosine Biosynthesis QueC ATPase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D RAK1035_2569 NADPH dependent preQ0 reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D RAK1035_3658 Molybdenum cofactor biosynthesis protein MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D RAK1035_2674 Molybdenum cofactor biosynthesis protein MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D RAK1035_1425 Molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D RAK1035_0439 Molybdenum cofactor biosynthesis protein MoaB K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D RAK1035_2673 Molybdopterin biosynthesis protein MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D RAK1035_3738 putative molybdopterin biosynthesis related methylmutase domain K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D RAK1035_3740 Molybdopterin-guanine dinucleotide biosynthesis protein MobA K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
D RAK1035_3200 CTP:molybdopterin cytidylyltransferase
D RAK1035_3394 putative MobA-related protein
C 00670 One carbon pool by folate [PATH:rok00670]
D RAK1035_1210 Formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D RAK1035_1211 Methylenetetrahydrofolate dehydrogenase (NADP+) K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D RAK1035_0118 Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RAK1035_2660 Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RAK1035_2895 Phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D RAK1035_1900 IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D RAK1035_2452 Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D RAK1035_2525 Aminomethyltransferase (glycine cleavage system T protein) K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D RAK1035_2878 Sarcosine oxidase alpha subunit K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D RAK1035_2887 Sarcosine oxidase alpha subunit K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D RAK1035_2854 Pterin-binding enzyme domain protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D RAK1035_2903 Betaine--homocysteine S-methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D RAK1035_3401 Thymidylate synthase thyX K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D RAK1035_0059 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D RAK1035_2855 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D RAK1035_0172 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
D RAK1035_2672 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
D RAK1035_3795 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D RAK1035_1003 Adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D RAK1035_0653 Sarcosine dehydrogenase K00315 DMGDH; dimethylglycine dehydrogenase [EC:1.5.8.4]
D RAK1035_1554 Dimethylglycine dehydrogenase K00315 DMGDH; dimethylglycine dehydrogenase [EC:1.5.8.4]
D RAK1035_1955 Sarcosine dehydrogenase K00315 DMGDH; dimethylglycine dehydrogenase [EC:1.5.8.4]
D RAK1035_3049 Sarcosine dehydrogenase K00315 DMGDH; dimethylglycine dehydrogenase [EC:1.5.8.4]
D RAK1035_3051 Sarcosine dehydrogenase K00315 DMGDH; dimethylglycine dehydrogenase [EC:1.5.8.4]
D RAK1035_2541 Glycine dehydrogenase, decarboxylating (glycine cleavage system P protein) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D RAK1035_0666 Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RAK1035_3780 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RAK1035_2526 Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D RAK1035_2236 Choline dehydrogenase K00108 betA; choline dehydrogenase [EC:1.1.99.1]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:rok00860]
D RAK1035_3652 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37]
D RAK1035_3763 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37]
D RAK1035_2521 Glutamyl-tRNA(Gln) synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RAK1035_3375 Glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RAK1035_1565 Glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D RAK1035_3542 Porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D RAK1035_3582 Porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D RAK1035_1075 Uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D RAK1035_3581 Uroporphyrinogen III decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D RAK1035_0581 Coproporphyrinogen III oxidase, aerobic K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D RAK1035_1659 Coproporphyrinogen III oxidase, oxygen-independent K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D RAK1035_1121 Protoporphyrinogen IX oxidase, HemJ-like K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-]
D RAK1035_1088 Ferrochelatase, protoheme ferro-lyase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D RAK1035_3232 Siroheme synthase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4]
D RAK1035_3507 Uroporphyrinogen-III methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D RAK1035_0310 Cytochrome c oxidase polypeptide I K02257 COX10; heme o synthase [EC:2.5.1.141]
D RAK1035_3555 Heme A synthase, cytochrome oxidase biogenesis protein Cox15-CtaA K02259 COX15; heme a synthase [EC:1.17.99.9]
D RAK1035_1946 Sirohydrochlorin cobaltochelatase K03795 cbiX; sirohydrochlorin cobaltochelatase [EC:4.99.1.3]
D RAK1035_1949 Cobalt-precorrin-2 C20-methyltransferase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151]
D RAK1035_1950 Cobalamin biosynthesis protein CbiG K13541 cbiGH-cobJ; cobalt-precorrin 5A hydrolase / cobalt-factor III methyltransferase / precorrin-3B C17-methyltransferase [EC:3.7.1.12 2.1.1.272 2.1.1.131]
D RAK1035_1951 Cobalt-precorrin-4 C11-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271]
D RAK1035_3685 Cobalt-precorrin-6x reductase K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106]
D RAK1035_3686 Cobalt-precorrin-6 synthase, anaerobic K02188 cbiD; cobalt-precorrin-5B (C1)-methyltransferase [EC:2.1.1.195]
D RAK1035_1948 Cobalt-precorrin-6y C5-methyltransferase K00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase / cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196]
D RAK1035_1947 Cobalt-precorrin-8x methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60]
D RAK1035_3508 Cobyrinic acid A,C-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D RAK1035_0890 CobN component of cobalt chelatase involved in B12 biosynthesis K02230 cobN; cobaltochelatase CobN [EC:6.6.1.2]
D RAK1035_2356 Aerobic cobaltochelatase CobS subunit K09882 cobS; cobaltochelatase CobS [EC:6.6.1.2]
D RAK1035_2355 Aerobic cobaltochelatase CobT subunit K09883 cobT; cobaltochelatase CobT [EC:6.6.1.2]
D RAK1035_2137 ATP:Cob(I)alamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D RAK1035_1685 Cob(I)alamin adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D RAK1035_2786 Cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D RAK1035_3723 Adenosylcobinamide-phosphate synthase K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D RAK1035_3722 L-threonine 3-O-phosphate decarboxylase K02225 cobC1; cobalamin biosynthesis protein CobC
D RAK1035_0184 Adenosylcobinamide kinase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D RAK1035_0070 Cobalamin synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D RAK1035_0069 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D RAK1035_0183 Phosphoglycerate mutase family protein K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73]
D RAK1035_3753 Protoporphyrin IX Mg-chelatase subunit H K03403 chlH; magnesium chelatase subunit H [EC:6.6.1.1]
D RAK1035_2723 Protoporphyrin IX Mg-chelatase subunit D K03404 chlD; magnesium chelatase subunit D [EC:6.6.1.1]
D RAK1035_2724 Protoporphyrin IX Mg-chelatase subunit I K03405 chlI; magnesium chelatase subunit I [EC:6.6.1.1]
D RAK1035_3755 Mg-protoporphyrin O-methyltransferase K03428 bchM; magnesium-protoporphyrin O-methyltransferase [EC:2.1.1.11]
D RAK1035_0539 Mg-protoporphyrin IX monomethyl ester oxidative cyclase (anaerobic) K04034 bchE; anaerobic magnesium-protoporphyrin IX monomethyl ester cyclase [EC:1.21.98.3]
D RAK1035_3761 Mg protoporphyrin IX monomethyl ester oxidative cyclase (aerobic) K04035 E1.14.13.81; magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase [EC:1.14.13.81]
D RAK1035_0027 Divinyl protochlorophyllide a 8-vinyl-reductase K19073 DVR; divinyl chlorophyllide a 8-vinyl-reductase [EC:1.3.1.75]
D RAK1035_0540 Protein BchJ, involved in reduction of C-8 vinyl of divinyl protochlorophyllide K04036 bchJ; divinyl protochlorophyllide a 8-vinyl-reductase [EC:1.-.-.-]
D RAK1035_3754 Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein ChlL K04037 chlL; light-independent protochlorophyllide reductase subunit L [EC:1.3.7.7]
D RAK1035_3751 Light-independent protochlorophyllide reductase subunit N K04038 chlN; light-independent protochlorophyllide reductase subunit N [EC:1.3.7.7]
D RAK1035_3752 Light-independent protochlorophyllide reductase subunit B K04039 chlB; light-independent protochlorophyllide reductase subunit B [EC:1.3.7.7]
D RAK1035_3747 Chlorophyll a synthase ChlG K04040 chlG; chlorophyll/bacteriochlorophyll a synthase [EC:2.5.1.62 2.5.1.133]
D RAK1035_3774 Chlorophyllide reductase subunit BchX K11333 bchX; 3,8-divinyl chlorophyllide a/chlorophyllide a reductase subunit X [EC:1.3.7.14 1.3.7.15]
D RAK1035_3772 Chlorophyllide reductase subunit BchY K11334 bchY; 3,8-divinyl chlorophyllide a/chlorophyllide a reductase subunit Y [EC:1.3.7.14 1.3.7.15]
D RAK1035_3771 Chlorophyllide reductase subunit BchZ K11335 bchZ; 3,8-divinyl chlorophyllide a/chlorophyllide a reductase subunit Z [EC:1.3.7.14 1.3.7.15]
D RAK1035_3750 2-vinyl bacteriochlorophyllide hydratase BchF K11336 bchF; 3-vinyl bacteriochlorophyllide hydratase [EC:4.2.1.165]
D RAK1035_3775 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase BchC K11337 bchC; bacteriochlorophyllide a dehydrogenase [EC:1.1.1.396]
D RAK1035_3745 Geranylgeranyl hydrogenase BchP K10960 chlP; geranylgeranyl diphosphate/geranylgeranyl-bacteriochlorophyllide a reductase [EC:1.3.1.83 1.3.1.111]
D RAK1035_0028 Bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:rok00130]
D RAK1035_3732 4-hydroxybenzoate polyprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D RAK1035_1082 3-demethylubiquinone-9 3-methyltransferase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
D RAK1035_1875 2-octaprenyl-6-methoxyphenol hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
D RAK1035_2273 2-octaprenyl-6-methoxyphenol hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
D RAK1035_1498 Ubiquinone/menaquinone biosynthesis methyltransferase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D RAK1035_4073 NADPH:quinone oxidoreductase 2 possible protective/detoxification role K19267 qorB; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:rok00900]
D RAK1035_2980 1-deoxy-D-xylulose 5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D RAK1035_3765 1-deoxy-D-xylulose 5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D RAK1035_3835 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D RAK1035_3032 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K12506 ispDF; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase / 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:2.7.7.60 4.6.1.12]
D RAK1035_1319 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D RAK1035_3650 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D RAK1035_0291 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D RAK1035_0792 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAK1035_0815 Acetyl-CoA acetyltransferase of ethylmalonyl-CoA pathway K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAK1035_1340 Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAK1035_1986 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAK1035_3744 Isopentenyl-diphosphate delta-isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D RAK1035_2979 Octaprenyl diphosphate synthase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D RAK1035_3777 Geranylgeranyl pyrophosphate synthetase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D RAK1035_1318 Decaprenyl diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D RAK1035_3837 Undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D RAK1035_3745 Geranylgeranyl hydrogenase BchP K10960 chlP; geranylgeranyl diphosphate/geranylgeranyl-bacteriochlorophyllide a reductase [EC:1.3.1.83 1.3.1.111]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis [PATH:rok00906]
D RAK1035_2727 Phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D RAK1035_3355 Phytoene/squalene synthetase-like protein K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D RAK1035_2726 Phytoene dehydrogenase K10027 crtI; phytoene desaturase [EC:1.3.99.26 1.3.99.28 1.3.99.29 1.3.99.31]
D RAK1035_3779 Hydroxyneurosporene dehydrogenase K09844 crtC; carotenoid 1,2-hydratase [EC:4.2.1.131]
D RAK1035_3778 Methoxyneurosporene dehydrogenase K09845 crtD; 1-hydroxycarotenoid 3,4-desaturase [EC:1.3.99.27]
D RAK1035_3776 Hydroxyneurosporene methyltransferase K09846 crtF; demethylspheroidene O-methyltransferase [EC:2.1.1.210]
D RAK1035_2725 Spheroidene monooxygenase K09847 crtA; spheroidene monooxygenase [EC:1.14.15.9]
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation [PATH:rok00903]
D RAK1035_0502 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RAK1035_1522 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RAK1035_0234 6-hexanolactone hydrolase
C 00907 Pinene, camphor and geraniol degradation [PATH:rok00907]
D RAK1035_0791 Enoyl-CoA hydratase, isoleucine degradation K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D RAK1035_3091 Hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D RAK1035_3563 Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:rok00523]
D RAK1035_1683 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RAK1035_1681 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D RAK1035_1680 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D RAK1035_1682 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures [PATH:rok01054]
D RAK1035_2758 Aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D RAK1035_2930 Aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
D RAK1035_1681 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis [PATH:rok00311]
D RAK1035_3512 Penicillin amidase family protein K01434 pac; penicillin G amidase [EC:3.5.1.11]
D RAK1035_4044 Penicillin amidase family protein K01434 pac; penicillin G amidase [EC:3.5.1.11]
D RAK1035_2199 Beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
C 00332 Carbapenem biosynthesis [PATH:rok00332]
D RAK1035_3211 Glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D RAK1035_3210 Gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:rok00261]
D RAK1035_1446 Sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D RAK1035_0061 Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RAK1035_1010 Aspartokinase associated with ectoine biosynthesis K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RAK1035_1242 Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D RAK1035_1448 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D RAK1035_1904 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:rok00521]
D RAK1035_1433 Glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D RAK1035_0191 Phosphoglucosamine mutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D RAK1035_1913 Inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D RAK1035_2142 Inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D RAK1035_1683 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RAK1035_1681 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D RAK1035_1680 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D RAK1035_1682 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D RAK1035_1433 Glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:rok00525]
D RAK1035_1683 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RAK1035_1681 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:rok00401]
D RAK1035_0204 Cyclohexadienyl dehydrogenase K00220 tyrC; cyclohexadieny/prephenate dehydrogenase [EC:1.3.1.43 1.3.1.12]
D RAK1035_3410 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RAK1035_1706 Aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D RAK1035_0203 Biosynthetic Aromatic amino acid aminotransferase beta K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RAK1035_2552 Histidinol-phosphate aminotransferase, Biosynthetic Aromatic amino acid aminotransferase beta K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D RAK1035_2683 Anthranilate synthase, aminase component K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D RAK1035_2677 Anthranilate synthase, amidotransferase component, Para-aminobenzoate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D RAK1035_3472 Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D RAK1035_1523 Toluenesulfonate zinc-independent alcohol dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RAK1035_2790 Oxidoreductase, short chain dehydrogenase/reductase family K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RAK1035_3471 3-oxoacyl-acyl-carrier protein reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RAK1035_2688 Enoyl-acyl-carrier-protein reductase, NADH K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D RAK1035_3806 Enoyl-acyl-carrier-protein reductase, NADH K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D RAK1035_4104 Enoyl-acyl-carrier-protein reductase, NADH K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D RAK1035_2835 Acyl carrier protein K02078 acpP; acyl carrier protein
D RAK1035_2952 Acyl carrier protein, putative K02078 acpP; acyl carrier protein
D RAK1035_3470 Acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:rok00999]
D RAK1035_3795 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D RAK1035_1123 Shikimate 5-dehydrogenase I alpha K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:rok00362]
D RAK1035_2578 Benzoate 1,2-dioxygenase alpha subunit K05549 benA-xylX; benzoate/toluate 1,2-dioxygenase subunit alpha [EC:1.14.12.10 1.14.12.-]
D RAK1035_2577 Benzoate 1,2-dioxygenase beta subunit K05550 benB-xylY; benzoate/toluate 1,2-dioxygenase subunit beta [EC:1.14.12.10 1.14.12.-]
D RAK1035_2576 Benzoate dioxygenase, ferredoxin reductase component K05784 benC-xylZ; benzoate/toluate 1,2-dioxygenase reductase component [EC:1.18.1.-]
D RAK1035_2575 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase K05783 benD-xylL; dihydroxycyclohexadiene carboxylate dehydrogenase [EC:1.3.1.25 1.3.1.-]
D RAK1035_2594 Catechol 1,2-dioxygenase 1 K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1]
D RAK1035_2579 Muconate cycloisomerase K01856 catB; muconate cycloisomerase [EC:5.5.1.1]
D RAK1035_0054 Beta-ketoadipate enol-lactone hydrolase K01055 pcaD; 3-oxoadipate enol-lactonase [EC:3.1.1.24]
D RAK1035_2598 Hypothetical protein K27848 E2.3.1.318; 3-oxoadipate:acetyl-CoA acetyltransferase [EC:2.3.1.318]
D RAK1035_1033 Biphenyl-2,3-diol 1,2-dioxygenase K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
D RAK1035_1245 2-keto-4-pentenoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
D RAK1035_0143 4-carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D RAK1035_3072 4-carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D RAK1035_1873 Ferredoxin reductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D RAK1035_3854 Ferredoxin, 2Fe-2S K04755 fdx; ferredoxin, 2Fe-2S
D RAK1035_0791 Enoyl-CoA hydratase, isoleucine degradation K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D RAK1035_2582 Enoyl-CoA hydratase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D RAK1035_2996 Glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D RAK1035_2133 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D RAK1035_0792 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAK1035_0815 Acetyl-CoA acetyltransferase of ethylmalonyl-CoA pathway K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAK1035_1340 Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAK1035_1986 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation [PATH:rok00627]
D RAK1035_0576 Cobalt-containing nitrile hydratase subunit alpha K01721 nthA; nitrile hydratase subunit alpha [EC:4.2.1.84]
D RAK1035_0574 putative nitrile hydratase subunit beta protein K20807 nthB; nitrile hydratase subunit beta [EC:4.2.1.84]
D RAK1035_0575 Nitrile hydratase beta subunit protein K20807 nthB; nitrile hydratase subunit beta [EC:4.2.1.84]
D RAK1035_0099 Aliphatic amidase AmiE K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RAK1035_1050 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RAK1035_1646 Aliphatic amidase AmiE K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00364 Fluorobenzoate degradation [PATH:rok00364]
D RAK1035_2578 Benzoate 1,2-dioxygenase alpha subunit K05549 benA-xylX; benzoate/toluate 1,2-dioxygenase subunit alpha [EC:1.14.12.10 1.14.12.-]
D RAK1035_2577 Benzoate 1,2-dioxygenase beta subunit K05550 benB-xylY; benzoate/toluate 1,2-dioxygenase subunit beta [EC:1.14.12.10 1.14.12.-]
D RAK1035_2576 Benzoate dioxygenase, ferredoxin reductase component K05784 benC-xylZ; benzoate/toluate 1,2-dioxygenase reductase component [EC:1.18.1.-]
D RAK1035_2575 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase K05783 benD-xylL; dihydroxycyclohexadiene carboxylate dehydrogenase [EC:1.3.1.25 1.3.1.-]
D RAK1035_2594 Catechol 1,2-dioxygenase 1 K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1]
D RAK1035_2579 Muconate cycloisomerase K01856 catB; muconate cycloisomerase [EC:5.5.1.1]
D RAK1035_0576 Cobalt-containing nitrile hydratase subunit alpha K01721 nthA; nitrile hydratase subunit alpha [EC:4.2.1.84]
D RAK1035_0574 putative nitrile hydratase subunit beta protein K20807 nthB; nitrile hydratase subunit beta [EC:4.2.1.84]
D RAK1035_0575 Nitrile hydratase beta subunit protein K20807 nthB; nitrile hydratase subunit beta [EC:4.2.1.84]
C 00625 Chloroalkane and chloroalkene degradation [PATH:rok00625]
D RAK1035_0835 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D RAK1035_1699 S-(hydroxymethyl) glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D RAK1035_0502 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RAK1035_1522 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RAK1035_0050 Haloacid dehalogenase, type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
D RAK1035_1569 (S)-2-haloacid dehalogenase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
D RAK1035_0264 Hydrolase, haloacid dehalogenase-like family
C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:rok00361]
D RAK1035_2594 Catechol 1,2-dioxygenase 1 K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1]
D RAK1035_2579 Muconate cycloisomerase K01856 catB; muconate cycloisomerase [EC:5.5.1.1]
D RAK1035_1033 Biphenyl-2,3-diol 1,2-dioxygenase K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
D RAK1035_0050 Haloacid dehalogenase, type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
D RAK1035_1569 (S)-2-haloacid dehalogenase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
D RAK1035_0264 Hydrolase, haloacid dehalogenase-like family
C 00623 Toluene degradation [PATH:rok00623]
D RAK1035_2594 Catechol 1,2-dioxygenase 1 K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1]
D RAK1035_2579 Muconate cycloisomerase K01856 catB; muconate cycloisomerase [EC:5.5.1.1]
C 00622 Xylene degradation [PATH:rok00622]
D RAK1035_2578 Benzoate 1,2-dioxygenase alpha subunit K05549 benA-xylX; benzoate/toluate 1,2-dioxygenase subunit alpha [EC:1.14.12.10 1.14.12.-]
D RAK1035_2577 Benzoate 1,2-dioxygenase beta subunit K05550 benB-xylY; benzoate/toluate 1,2-dioxygenase subunit beta [EC:1.14.12.10 1.14.12.-]
D RAK1035_2576 Benzoate dioxygenase, ferredoxin reductase component K05784 benC-xylZ; benzoate/toluate 1,2-dioxygenase reductase component [EC:1.18.1.-]
D RAK1035_2575 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase K05783 benD-xylL; dihydroxycyclohexadiene carboxylate dehydrogenase [EC:1.3.1.25 1.3.1.-]
D RAK1035_1033 Biphenyl-2,3-diol 1,2-dioxygenase K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
D RAK1035_1245 2-keto-4-pentenoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
C 00633 Nitrotoluene degradation [PATH:rok00633]
D RAK1035_3223 NADH-dependent flavin oxidoreductase, Oye family K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-]
D RAK1035_3641 Uptake hydrogenase large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6]
D RAK1035_3642 Uptake hydrogenase small subunit precursor K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
D RAK1035_3644 Uptake hydrogenase large subunit K23549 hupV; uptake hydrogenase large subunit [EC:1.12.99.6]
D RAK1035_3645 Uptake hydrogenase small subunit precursor K23548 hupU; uptake hydrogenase small subunit [EC:1.12.99.6]
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation [PATH:rok00643]
D RAK1035_0576 Cobalt-containing nitrile hydratase subunit alpha K01721 nthA; nitrile hydratase subunit alpha [EC:4.2.1.84]
D RAK1035_0574 putative nitrile hydratase subunit beta protein K20807 nthB; nitrile hydratase subunit beta [EC:4.2.1.84]
D RAK1035_0575 Nitrile hydratase beta subunit protein K20807 nthB; nitrile hydratase subunit beta [EC:4.2.1.84]
D RAK1035_0099 Aliphatic amidase AmiE K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RAK1035_1050 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RAK1035_1646 Aliphatic amidase AmiE K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RAK1035_1033 Biphenyl-2,3-diol 1,2-dioxygenase K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
C 00791 Atrazine degradation
D RAK1035_0102 Urease alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D RAK1035_0598 Urease alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D RAK1035_0599 Urease beta subunit K01429 ureB; urease subunit beta [EC:3.5.1.5]
D RAK1035_0601 Urease gamma subunit K01430 ureA; urease subunit gamma [EC:3.5.1.5]
D RAK1035_0103 Urease beta subunit K14048 ureAB; urease subunit gamma/beta [EC:3.5.1.5]
C 00930 Caprolactam degradation [PATH:rok00930]
D RAK1035_1884 Alkane-1 monooxygenase K00496 alkB1_2; alkane 1-monooxygenase [EC:1.14.15.3]
D RAK1035_2496 Alkane-1 monooxygenase K00496 alkB1_2; alkane 1-monooxygenase [EC:1.14.15.3]
D RAK1035_0791 Enoyl-CoA hydratase, isoleucine degradation K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D RAK1035_0234 6-hexanolactone hydrolase
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
D RAK1035_1245 2-keto-4-pentenoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
C 00626 Naphthalene degradation [PATH:rok00626]
D RAK1035_0835 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D RAK1035_1699 S-(hydroxymethyl) glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
D RAK1035_1410 Alpha-methylacyl-CoA racemase K01796 AMACR; alpha-methylacyl-CoA racemase [EC:5.1.99.4]
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:rok03020]
D RAK1035_2633 DNA-directed RNA polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D RAK1035_2634 DNA-directed RNA polymerase beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D RAK1035_1221 DNA-directed RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D RAK1035_0287 DNA-directed RNA polymerase omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:rok03010]
D RAK1035_0720 SSU ribosomal protein S1p K02945 RP-S1; small subunit ribosomal protein S1
D RAK1035_3002 SSU ribosomal protein S2p (SAe) K02967 RP-S2; small subunit ribosomal protein S2
D RAK1035_1928 SSU ribosomal protein S3p (S3e) K02982 RP-S3; small subunit ribosomal protein S3
D RAK1035_0202 SSU ribosomal protein S4p (S9e) K02986 RP-S4; small subunit ribosomal protein S4
D RAK1035_1941 SSU ribosomal protein S5p (S2e) K02988 RP-S5; small subunit ribosomal protein S5
D RAK1035_3445 SSU ribosomal protein S6p K02990 RP-S6; small subunit ribosomal protein S6
D RAK1035_1917 SSU ribosomal protein S7p (S5e) K02992 RP-S7; small subunit ribosomal protein S7
D RAK1035_1938 SSU ribosomal protein S8p (S15Ae) K02994 RP-S8; small subunit ribosomal protein S8
D RAK1035_2814 SSU ribosomal protein S9p (S16e) K02996 RP-S9; small subunit ribosomal protein S9
D RAK1035_1920 SSU ribosomal protein S10p (S20e) K02946 RP-S10; small subunit ribosomal protein S10
D RAK1035_1220 SSU ribosomal protein S11p (S14e) K02948 RP-S11; small subunit ribosomal protein S11
D RAK1035_1916 SSU ribosomal protein S12p (S23e) K02950 RP-S12; small subunit ribosomal protein S12
D RAK1035_1219 SSU ribosomal protein S13p (S18e) K02952 RP-S13; small subunit ribosomal protein S13
D RAK1035_1937 SSU ribosomal protein S14p (S29e), zinc-independent K02954 RP-S14; small subunit ribosomal protein S14
D RAK1035_1180 SSU ribosomal protein S15p (S13e) K02956 RP-S15; small subunit ribosomal protein S15
D RAK1035_0859 SSU ribosomal protein S16p K02959 RP-S16; small subunit ribosomal protein S16
D RAK1035_1933 SSU ribosomal protein S17p (S11e) K02961 RP-S17; small subunit ribosomal protein S17
D RAK1035_3446 SSU ribosomal protein S18p, zinc-independent K02963 RP-S18; small subunit ribosomal protein S18
D RAK1035_1926 SSU ribosomal protein S19p (S15e) K02965 RP-S19; small subunit ribosomal protein S19
D RAK1035_1291 SSU ribosomal protein S20p K02968 RP-S20; small subunit ribosomal protein S20
D RAK1035_0781 SSU ribosomal protein S21p K02970 RP-S21; small subunit ribosomal protein S21
D RAK1035_2629 LSU ribosomal protein L1p (L10Ae) K02863 RP-L1; large subunit ribosomal protein L1
D RAK1035_1925 LSU ribosomal protein L2p (L8e) K02886 RP-L2; large subunit ribosomal protein L2
D RAK1035_1921 LSU ribosomal protein L3p (L3e) K02906 RP-L3; large subunit ribosomal protein L3
D RAK1035_1922 LSU ribosomal protein L4p (L1e) K02926 RP-L4; large subunit ribosomal protein L4
D RAK1035_1936 LSU ribosomal protein L5p (L11e) K02931 RP-L5; large subunit ribosomal protein L5
D RAK1035_1939 LSU ribosomal protein L6p (L9e) K02933 RP-L6; large subunit ribosomal protein L6
D RAK1035_2631 LSU ribosomal protein L7/L12 (P1/P2) K02935 RP-L7; large subunit ribosomal protein L7/L12
D RAK1035_3447 LSU ribosomal protein L9p K02939 RP-L9; large subunit ribosomal protein L9
D RAK1035_2630 LSU ribosomal protein L10p (P0) K02864 RP-L10; large subunit ribosomal protein L10
D RAK1035_2628 LSU ribosomal protein L11p (L12e) K02867 RP-L11; large subunit ribosomal protein L11
D RAK1035_2813 LSU ribosomal protein L13p (L13Ae) K02871 RP-L13; large subunit ribosomal protein L13
D RAK1035_1934 LSU ribosomal protein L14p (L23e) K02874 RP-L14; large subunit ribosomal protein L14
D RAK1035_1215 LSU ribosomal protein L15p (L27Ae) K02876 RP-L15; large subunit ribosomal protein L15
D RAK1035_1929 LSU ribosomal protein L16p (L10e) K02878 RP-L16; large subunit ribosomal protein L16
D RAK1035_1222 LSU ribosomal protein L17p K02879 RP-L17; large subunit ribosomal protein L17
D RAK1035_1940 LSU ribosomal protein L18p (L5e) K02881 RP-L18; large subunit ribosomal protein L18
D RAK1035_0863 LSU ribosomal protein L19p K02884 RP-L19; large subunit ribosomal protein L19
D RAK1035_0705 LSU ribosomal protein L20p K02887 RP-L20; large subunit ribosomal protein L20
D RAK1035_3215 LSU ribosomal protein L21p K02888 RP-L21; large subunit ribosomal protein L21
D RAK1035_1927 LSU ribosomal protein L22p (L17e) K02890 RP-L22; large subunit ribosomal protein L22
D RAK1035_1923 LSU ribosomal protein L23p (L23Ae) K02892 RP-L23; large subunit ribosomal protein L23
D RAK1035_1935 LSU ribosomal protein L24p (L26e) K02895 RP-L24; large subunit ribosomal protein L24
D RAK1035_3423 LSU ribosomal protein L25p K02897 RP-L25; large subunit ribosomal protein L25
D RAK1035_3214 LSU ribosomal protein L27p K02899 RP-L27; large subunit ribosomal protein L27
D RAK1035_3727 LSU ribosomal protein L28p, zinc-independent K02902 RP-L28; large subunit ribosomal protein L28
D RAK1035_1932 LSU ribosomal protein L29p (L35e) K02904 RP-L29; large subunit ribosomal protein L29
D RAK1035_1942 LSU ribosomal protein L30p (L7e) K02907 RP-L30; large subunit ribosomal protein L30
D RAK1035_0864 LSU ribosomal protein L31p, zinc-independent K02909 RP-L31; large subunit ribosomal protein L31
D RAK1035_3133 LSU ribosomal protein L32p K02911 RP-L32; large subunit ribosomal protein L32
D RAK1035_2477 LSU ribosomal protein L33p, zinc-independent K02913 RP-L33; large subunit ribosomal protein L33
D RAK1035_3118 LSU ribosomal protein L34p K02914 RP-L34; large subunit ribosomal protein L34
D RAK1035_0706 LSU ribosomal protein L35p K02916 RP-L35; large subunit ribosomal protein L35
D RAK1035_3566 LSU ribosomal protein L36p K02919 RP-L36; large subunit ribosomal protein L36
D RAK1035_3932 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RAK1035_3938 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RAK1035_3935 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RAK1035_3941 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RAK1035_3936 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D RAK1035_3942 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:rok00970]
D RAK1035_3934 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RAK1035_3940 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RAK1035_3971 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RAK1035_3930 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RAK1035_3957 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RAK1035_3961 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RAK1035_3962 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RAK1035_3966 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D RAK1035_3949 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D RAK1035_3950 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D RAK1035_3956 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D RAK1035_3931 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D RAK1035_3972 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D RAK1035_3927 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RAK1035_3948 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RAK1035_3970 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RAK1035_3923 tRNA-His K14226 tRNA-His; tRNA His
D RAK1035_3933 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D RAK1035_3939 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D RAK1035_3928 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RAK1035_3946 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RAK1035_3951 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RAK1035_3958 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RAK1035_3967 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RAK1035_3945 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D RAK1035_3937 tRNA-Met K14230 tRNA-Met; tRNA Met
D RAK1035_3943 tRNA-Met K14230 tRNA-Met; tRNA Met
D RAK1035_3959 tRNA-Met K14230 tRNA-Met; tRNA Met
D RAK1035_3969 tRNA-Met K14230 tRNA-Met; tRNA Met
D RAK1035_3944 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D RAK1035_3924 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D RAK1035_3954 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D RAK1035_3964 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D RAK1035_3947 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RAK1035_3955 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RAK1035_3960 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RAK1035_3965 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RAK1035_3925 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RAK1035_3929 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RAK1035_3963 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RAK1035_3953 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D RAK1035_3926 tRNA-Val K14237 tRNA-Val; tRNA Val
D RAK1035_3952 tRNA-Val K14237 tRNA-Val; tRNA Val
D RAK1035_3968 tRNA-Val K14237 tRNA-Val; tRNA Val
D RAK1035_2521 Glutamyl-tRNA(Gln) synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RAK1035_3375 Glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RAK1035_1876 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D RAK1035_2240 Aspartyl-tRNA(Asn) amidotransferase subunit A, Glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D RAK1035_2430 Aspartyl-tRNA(Asn) amidotransferase subunit B, Glutamyl-tRNA(Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D RAK1035_2239 Aspartyl-tRNA(Asn) amidotransferase subunit C, Glutamyl-tRNA(Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D RAK1035_3110 Alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D RAK1035_0351 Aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RAK1035_2471 Glycyl-tRNA synthetase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D RAK1035_2473 Glycyl-tRNA synthetase beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D RAK1035_0349 Threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D RAK1035_3672 Seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D RAK1035_3357 Cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D RAK1035_0337 Methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D RAK1035_2069 Methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D RAK1035_3880 Aldehyde dehydrogenase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D RAK1035_0040 Valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D RAK1035_2015 Leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RAK1035_3426 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D RAK1035_1490 Lysyl-tRNA synthetase (class I) K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D RAK1035_3152 Arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RAK1035_2255 Prolyl-tRNA synthetase, bacterial type K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D RAK1035_0635 Histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D RAK1035_1297 Phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D RAK1035_1284 Phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D RAK1035_3185 Tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RAK1035_1868 Tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
D RAK1035_0280 Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:rok03060]
D RAK1035_1217 Preprotein translocase secY subunit K03076 secY; preprotein translocase subunit SecY
D RAK1035_2626 Preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D RAK1035_3054 Preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D RAK1035_3670 Protein-export membrane protein SecD K12257 secDF; SecD/SecF fusion protein
D RAK1035_3671 Preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D RAK1035_1357 Inner membrane protein translocase component YidC, long form K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RAK1035_1308 Protein export cytoplasm protein SecA ATPase RNA helicase K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RAK1035_1126 Export cytoplasm chaperone protein, SecB K03071 secB; preprotein translocase subunit SecB
D RAK1035_0856 Signal recognition particle, subunit Ffh SRP54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D RAK1035_2498 Signal recognition particle receptor protein FtsY (alpha subunit) K03110 ftsY; fused signal recognition particle receptor
D RAK1035_3166 Twin-arginine translocation protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D RAK1035_3165 Twin-arginine translocation protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D RAK1035_3164 Twin-arginine translocation protein TatC K03118 tatC; sec-independent protein translocase protein TatC
D RAK1035_0281 Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D RAK1035_1899 Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D RAK1035_4041 Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D RAK1035_4057 Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:rok04122]
D RAK1035_3045 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RAK1035_1707 Thiosulfate sulfurtransferase, rhodanese K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D RAK1035_3026 Rhodanese-related sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D RAK1035_2911 tRNA 5-methylaminomethyl-2-thiouridine synthase TusA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D RAK1035_2800 tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D RAK1035_1425 Molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D RAK1035_3658 Molybdenum cofactor biosynthesis protein MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D RAK1035_1424 Molybdenum cofactor biosynthesis protein MoaD K03636 moaD; sulfur-carrier protein
D RAK1035_2864 Hypothetical protein K03636 moaD; sulfur-carrier protein
D RAK1035_1269 Thiamine biosynthesis protein ThiF K21147 moeZR; sulfur-carrier protein adenylyltransferase/sulfurtransferase [EC:2.7.7.80 2.7.7.- 2.8.1.11 2.8.1.-]
D RAK1035_2674 Molybdenum cofactor biosynthesis protein MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D RAK1035_0439 Molybdenum cofactor biosynthesis protein MoaB K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D RAK1035_1272 Sulfur carrier protein ThiS K03154 thiS; sulfur carrier protein
C 03050 Proteasome
C 03018 RNA degradation [PATH:rok03018]
D RAK1035_1869 Adenosine (5')-pentaphospho-(5'')-adenosine pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D RAK1035_2910 Ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D RAK1035_3647 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RAK1035_1179 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D RAK1035_3533 ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D RAK1035_0572 3'-to-5' exoribonuclease RNase R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D RAK1035_2615 Helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D RAK1035_1344 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D RAK1035_1120 Transcription termination factor Rho K03628 rho; transcription termination factor Rho
D RAK1035_3344 Metallo-beta-lactamase family protein, RNA-specific K12574 rnj; ribonuclease J [EC:3.1.-.-]
D RAK1035_1313 Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D RAK1035_1731 Heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RAK1035_3340 RNA-binding protein Hfq K03666 hfq; host factor-I protein
D RAK1035_0002 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D RAK1035_2817 Polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D RAK1035_3416 Polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D RAK1035_1096 tRNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:rok03030]
D RAK1035_0525 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RAK1035_1125 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RAK1035_1833 Polymerase epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RAK1035_0637 DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RAK1035_1748 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RAK1035_2308 DNA polymerase III delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RAK1035_2017 DNA polymerase II K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RAK1035_2322 DNA polymerase III chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D RAK1035_1289 DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RAK1035_2793 Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D RAK1035_3810 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D RAK1035_3105 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RAK1035_2073 Ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D RAK1035_1277 Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D RAK1035_1013 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RAK1035_2803 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:rok03410]
D RAK1035_1494 Endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D RAK1035_1885 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D RAK1035_1497 Formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D RAK1035_3684 DNA-3-methyladenine glycosylase II K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D RAK1035_0813 DNA-3-methyladenine glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D RAK1035_0437 Uracil-DNA glycosylase, family 4 K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D RAK1035_3156 Exodeoxyribonuclease III K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2]
D RAK1035_3477 Exodeoxyribonuclease III K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2]
D RAK1035_1013 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RAK1035_3827 Single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D RAK1035_2803 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:rok03420]
D RAK1035_3540 Transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D RAK1035_3160 Excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D RAK1035_0536 Excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D RAK1035_1419 Excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D RAK1035_3693 ATP-dependent DNA helicase UvrD/PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RAK1035_1013 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RAK1035_2803 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:rok03430]
D RAK1035_1109 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D RAK1035_0295 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D RAK1035_3693 ATP-dependent DNA helicase UvrD/PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RAK1035_3851 Exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D RAK1035_2978 Exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D RAK1035_3827 Single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D RAK1035_3105 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RAK1035_0637 DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RAK1035_1289 DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RAK1035_1748 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RAK1035_2017 DNA polymerase II K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RAK1035_2308 DNA polymerase III delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RAK1035_0525 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RAK1035_1125 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RAK1035_1833 Polymerase epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RAK1035_2322 DNA polymerase III chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D RAK1035_2803 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:rok03440]
D RAK1035_3827 Single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D RAK1035_3105 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RAK1035_1288 DNA recombination and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D RAK1035_0276 DNA recombination and repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D RAK1035_1746 Recombination protein RecR K06187 recR; recombination protein RecR
D RAK1035_3111 RecA protein K03553 recA; recombination protein RecA
D RAK1035_1013 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RAK1035_2701 Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D RAK1035_2702 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D RAK1035_2700 Crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D RAK1035_2804 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D RAK1035_0637 DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RAK1035_1289 DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RAK1035_1748 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RAK1035_2017 DNA polymerase II K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RAK1035_2308 DNA polymerase III delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RAK1035_0525 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RAK1035_1125 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RAK1035_1833 Polymerase epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RAK1035_2322 DNA polymerase III chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D RAK1035_2695 Helicase PriA essential for oriC/DnaA-independent DNA replication K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus and Alphavirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03273 Virion - Lassa virus and SFTS virus
C 03272 Virion - Hepatitis viruses
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:rok02010]
D RAK1035_0978 ABC-type tungstate transport system, periplasmic binding protein K05772 tupA; tungstate transport system substrate-binding protein
D RAK1035_0980 ABC-type tungstate transport system, permease protein K05773 tupB; tungstate transport system permease protein
D RAK1035_0979 ABC-type tungstate transport system, ATP-binding protein K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6]
D RAK1035_0623 Nitrate ABC transporter, nitrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D RAK1035_1619 Cyanate ABC transporter, substrate binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D RAK1035_0622 Cyanate ABC transporter, permease protein K15577 nrtB; nitrate/nitrite transport system permease protein
D RAK1035_1620 Cyanate ABC transporter, permease protein K15577 nrtB; nitrate/nitrite transport system permease protein
D RAK1035_0621 Nitrate ABC transporter, ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D RAK1035_1621 Cyanate ABC transporter, ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D RAK1035_0808 Taurine-binding periplasmic protein TauA K15551 tauA; taurine transport system substrate-binding protein
D RAK1035_0810 Taurine transport system permease protein TauC K15552 tauC; taurine transport system permease protein
D RAK1035_0809 Taurine transport ATP-binding protein TauB K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7]
D RAK1035_1268 Hydroxymethylpyrimidine ABC transporter, substrate-binding component K15598 thiY; putative hydroxymethylpyrimidine transport system substrate-binding protein
D RAK1035_2717 Hydroxymethylpyrimidine ABC transporter, transmembrane component K15599 thiX; putative hydroxymethylpyrimidine transport system permease protein
D RAK1035_2719 Hydroxymethylpyrimidine ABC transporter, ATPase component K15600 thiZ; putative hydroxymethylpyrimidine transport system ATP-binding protein
D RAK1035_0455 Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA K02020 modA; molybdate transport system substrate-binding protein
D RAK1035_0454 Molybdenum transport system permease protein ModB K02018 modB; molybdate transport system permease protein
D RAK1035_0453 Molybdenum transport ATP-binding protein ModC K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D RAK1035_2437 Ferric iron ABC transporter, iron-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D RAK1035_0068 Ferric iron ABC transporter, permease protein K02011 afuB; iron(III) transport system permease protein
D RAK1035_3056 Ferric iron ABC transporter, ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D RAK1035_0493 ABC transporter, periplasmic spermidine putrescine-binding protein PotD K11069 potD; spermidine/putrescine transport system substrate-binding protein
D RAK1035_0591 ABC transporter, periplasmic spermidine putrescine-binding protein PotD K11069 potD; spermidine/putrescine transport system substrate-binding protein
D RAK1035_0613 ABC transporter, periplasmic spermidine putrescine-binding protein PotD K11069 potD; spermidine/putrescine transport system substrate-binding protein
D RAK1035_1260 ABC transporter, periplasmic spermidine putrescine-binding protein PotD K11069 potD; spermidine/putrescine transport system substrate-binding protein
D RAK1035_1633 ABC transporter, periplasmic spermidine putrescine-binding protein PotD K11069 potD; spermidine/putrescine transport system substrate-binding protein
D RAK1035_2457 ABC transporter,binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D RAK1035_0491 ABC transporter permease component K11070 potC; spermidine/putrescine transport system permease protein
D RAK1035_0588 Spermidine Putrescine ABC transporter permease component potC K11070 potC; spermidine/putrescine transport system permease protein
D RAK1035_0610 Spermidine Putrescine ABC transporter permease component potC K11070 potC; spermidine/putrescine transport system permease protein
D RAK1035_1261 Spermidine Putrescine ABC transporter permease component potC K11070 potC; spermidine/putrescine transport system permease protein
D RAK1035_1635 Spermidine Putrescine ABC transporter permease component potC K11070 potC; spermidine/putrescine transport system permease protein
D RAK1035_2459 Spermidine Putrescine ABC transporter permease component potC K11070 potC; spermidine/putrescine transport system permease protein
D RAK1035_0492 ABC transporter permease protein K11071 potB; spermidine/putrescine transport system permease protein
D RAK1035_0589 Spermidine Putrescine ABC transporter permease component PotB K11071 potB; spermidine/putrescine transport system permease protein
D RAK1035_0611 Spermidine Putrescine ABC transporter permease component PotB K11071 potB; spermidine/putrescine transport system permease protein
D RAK1035_1262 Spermidine Putrescine ABC transporter permease component PotB K11071 potB; spermidine/putrescine transport system permease protein
D RAK1035_1634 Spermidine Putrescine ABC transporter permease component PotB K11071 potB; spermidine/putrescine transport system permease protein
D RAK1035_2458 Spermidine Putrescine ABC transporter permease component PotB K11071 potB; spermidine/putrescine transport system permease protein
D RAK1035_0490 Maltose/maltodextrin transport ATP-binding protein MalK K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D RAK1035_0590 Putrescine transport ATP-binding protein PotA K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D RAK1035_0612 Putrescine transport ATP-binding protein PotA K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D RAK1035_1259 Putrescine transport ATP-binding protein PotA K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D RAK1035_1632 Putrescine transport ATP-binding protein PotA K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D RAK1035_2460 Putrescine transport ATP-binding protein PotA K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D RAK1035_1170 Putrescine ABC transporter putrescine-binding protein PotF K11073 potF; putrescine transport system substrate-binding protein
D RAK1035_1173 Putrescine transport system permease protein PotI K11074 potI; putrescine transport system permease protein
D RAK1035_1172 Putrescine transport system permease protein PotH K11075 potH; putrescine transport system permease protein
D RAK1035_1171 Putrescine transport ATP-binding protein PotG K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16]
D RAK1035_1549 Glycine betaine/proline ABC transporter, periplasmic substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D RAK1035_1861 L-proline glycine betaine binding ABC transporter protein ProX K02002 proX; glycine betaine/proline transport system substrate-binding protein
D RAK1035_2232 L-proline glycine betaine binding ABC transporter protein ProX K02002 proX; glycine betaine/proline transport system substrate-binding protein
D RAK1035_1551 L-proline glycine betaine ABC transport system permease protein ProW K02001 proW; glycine betaine/proline transport system permease protein
D RAK1035_1863 L-proline glycine betaine ABC transport system permease protein ProW K02001 proW; glycine betaine/proline transport system permease protein
D RAK1035_2230 L-proline glycine betaine ABC transport system permease protein ProW K02001 proW; glycine betaine/proline transport system permease protein
D RAK1035_1550 L-proline glycine betaine ABC transport system permease protein ProV K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D RAK1035_1862 L-proline glycine betaine ABC transport system permease protein ProV K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D RAK1035_2229 L-proline glycine betaine ABC transport system permease protein ProV K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D RAK1035_1586 L-proline glycine betaine binding ABC transporter protein ProX K05845 opuC; osmoprotectant transport system substrate-binding protein
D RAK1035_1583 L-proline glycine betaine binding ABC transporter protein ProX K05846 opuBD; osmoprotectant transport system permease protein
D RAK1035_1584 Binding-protein-dependent transport systems inner membrane component K05846 opuBD; osmoprotectant transport system permease protein
D RAK1035_1582 L-proline glycine betaine ABC transport system permease protein ProV K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D RAK1035_1780 Dihydroxyacetone ABC transport system, ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D RAK1035_1781 Dihydroxyacetone ABC transport system, ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D RAK1035_0299 ABC-type transport system auxiliary component K07323 mlaC; phospholipid transport system substrate-binding protein
D RAK1035_0482 ABC-type transport system periplasmic component K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D RAK1035_3009 ABC-type transport system permease component K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D RAK1035_3010 Histidine ABC transporter, ATP-binding protein HisP K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D RAK1035_0645 Nucleoside ABC transporter, periplasmic nucleoside-binding protein K07335 bmpA; basic membrane protein A and related proteins
D RAK1035_0989 Nucleoside ABC transporter, periplasmic nucleoside-binding protein K07335 bmpA; basic membrane protein A and related proteins
D RAK1035_0643 Nucleoside ABC transporter, permease protein 1 K23535 nupB; general nucleoside transport system permease protein
D RAK1035_0991 Nucleoside ABC transporter, permease protein 1 K23535 nupB; general nucleoside transport system permease protein
D RAK1035_0644 Nucleoside ABC transporter, permease protein 2 K23536 nupC; general nucleoside transport system permease protein
D RAK1035_0992 Nucleoside ABC transporter, permease protein 2 K23536 nupC; general nucleoside transport system permease protein
D RAK1035_0642 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D RAK1035_0990 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D RAK1035_0461 Glycerol-3-phosphate ABC transporter, permease protein UgpA K17321 glpV; glycerol transport system substrate-binding protein
D RAK1035_0464 Glycerol-3-phosphate ABC transporter, permease protein UgpA K17322 glpP; glycerol transport system permease protein
D RAK1035_0463 Glycerol-3-phosphate ABC transporter, permease protein UgpE K17323 glpQ; glycerol transport system permease protein
D RAK1035_0466 Glycerol-3-phosphate ABC transporter, ATP-binding protein UgpC K17324 glpS; glycerol transport system ATP-binding protein
D RAK1035_0465 Glycerol-3-phosphate ABC transporter, ATP-binding protein UgpC K17325 glpT; glycerol transport system ATP-binding protein
D RAK1035_0771 Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D RAK1035_0935 Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D RAK1035_0770 Glycerol-3-phosphate ABC transporter, permease protein UgpA K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D RAK1035_0934 Glycerol-3-phosphate ABC transporter, permease protein UgpA K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D RAK1035_0769 Glycerol-3-phosphate ABC transporter, permease protein UgpE K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D RAK1035_0933 Glycerol-3-phosphate ABC transporter, permease protein UgpE K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D RAK1035_0772 Glycerol-3-phosphate ABC transporter, ATP-binding protein UgpC K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D RAK1035_0932 Glycerol-3-phosphate ABC transporter, ATP-binding protein UgpC K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D RAK1035_1310 OmpA domain protein K02040 pstS; phosphate transport system substrate-binding protein
D RAK1035_2989 Phosphate ABC transporter, periplasmic phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D RAK1035_2990 Phosphate transport system permease protein PstC K02037 pstC; phosphate transport system permease protein
D RAK1035_2991 Phosphate transport system permease protein PstA K02038 pstA; phosphate transport system permease protein
D RAK1035_2992 Phosphate transport ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D RAK1035_0256 Phosphonate ABC transporter phosphate-binding periplasmic component K02044 phnD; phosphonate transport system substrate-binding protein
D RAK1035_0758 Phosphonate ABC transporter phosphate-binding periplasmic component K02044 phnD; phosphonate transport system substrate-binding protein
D RAK1035_4048 Phosphonate ABC transporter phosphate-binding periplasmic component K02044 phnD; phosphonate transport system substrate-binding protein
D RAK1035_0257 Phosphonate ABC transporter permease protein phnE2 K02042 phnE; phosphonate transport system permease protein
D RAK1035_0258 Phosphonate ABC transporter permease protein phnE1 K02042 phnE; phosphonate transport system permease protein
D RAK1035_0756 Phosphonate ABC transporter permease protein phnE1 K02042 phnE; phosphonate transport system permease protein
D RAK1035_4050 Phosphonate ABC transporter permease protein phnE K02042 phnE; phosphonate transport system permease protein
D RAK1035_0255 Phosphonate ABC transporter ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D RAK1035_0757 Phosphonate ABC transporter ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D RAK1035_4049 Phosphonate ABC transporter ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D RAK1035_1045 Glutamate Aspartate periplasmic binding protein precursor GltI K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D RAK1035_1047 Glutamate Aspartate transport system permease protein GltK K10002 gltK; glutamate/aspartate transport system permease protein
D RAK1035_1046 Glutamate Aspartate transport system permease protein GltJ K10003 gltJ; glutamate/aspartate transport system permease protein
D RAK1035_1048 Glutamate Aspartate transport ATP-binding protein GltL K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D RAK1035_1755 Glutamate Aspartate periplasmic binding protein precursor GltI K09969 aapJ; general L-amino acid transport system substrate-binding protein
D RAK1035_1756 Glutamate/glutamine/aspartate/asparagine transport system permease protein bztB K09970 aapQ; general L-amino acid transport system permease protein
D RAK1035_1757 Glutamate/glutamine/aspartate/asparagine transport system permease protein bztC K09971 aapM; general L-amino acid transport system permease protein
D RAK1035_1758 Glutamate/glutamine/aspartate/asparagine ABC transporter, ATP-binding protein K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1]
D RAK1035_2172 Amino acid ABC transporter, periplasmic amino acid-binding portion K16961 yxeM; putative S-methylcysteine transport system substrate-binding protein
D RAK1035_2173 Amino acid ABC transporter, permease protein K16962 yxeN; putative S-methylcysteine transport system permease protein
D RAK1035_2174 ABC-type polar amino acid transport system, ATPase component K16963 yxeO; putative S-methylcysteine transport system ATP-binding protein
D RAK1035_2613 ABC transporter, substrate binding protein K23061 lhpP; hydroxyproline transporter system substrate-binding protein
D RAK1035_2612 Putative transport system permease protein K23062 lhpM; hydroxyproline transport system permease protein
D RAK1035_2611 putative permease of ABC transporter K23063 lhpN; hydroxyproline transport system permease protein
D RAK1035_2610 Glutamate transport ATP-binding protein K23064 lhpO; hydroxyproline transport system ATP-binding protein [EC:7.4.2.1]
D RAK1035_0108 Urea ABC transporter, urea binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RAK1035_0373 Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RAK1035_1056 Branched-chain amino acid ABC transporter, amino acid-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RAK1035_1385 High-affinity leucine-specific transport system, periplasmic binding protein LivK K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RAK1035_1648 Urea ABC transporter, urea binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RAK1035_2574 Benzoate transport, extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RAK1035_2759 Branched-chain amino acid ABC transporter, amino acid-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RAK1035_2868 ABC transporter, periplasmic protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RAK1035_2871 ABC transporter, periplasmic protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RAK1035_3289 ABC-type branched-chain amino acid transport systems, periplasmic component K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RAK1035_3506 Branched-chain amino acid ABC transporter, amino acid-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RAK1035_0376 Branched-chain amino acid ABC transporter, permease protein K01997 livH; branched-chain amino acid transport system permease protein
D RAK1035_1057 High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein
D RAK1035_1383 High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein
D RAK1035_2573 Benzoate transport, inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D RAK1035_2641 High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein
D RAK1035_2760 High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein
D RAK1035_2872 High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein
D RAK1035_3286 High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein
D RAK1035_0374 Branched-chain amino acid transport system permease protein LivM K01998 livM; branched-chain amino acid transport system permease protein
D RAK1035_1058 ABC transporter ATP-binding/permease protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RAK1035_1382 Branched-chain amino acid transport system permease protein LivM K01998 livM; branched-chain amino acid transport system permease protein
D RAK1035_2572 Benzoate transport, inner-membrane translocator precursor K01998 livM; branched-chain amino acid transport system permease protein
D RAK1035_2640 Branched-chain amino acid transport system permease protein LivM K01998 livM; branched-chain amino acid transport system permease protein
D RAK1035_2761 Branched-chain amino acid transport system permease protein LivM K01998 livM; branched-chain amino acid transport system permease protein
D RAK1035_2873 Branched-chain amino acid transport system permease protein LivM K01998 livM; branched-chain amino acid transport system permease protein
D RAK1035_3285 Branched-chain amino acid transport system permease protein LivM K01998 livM; branched-chain amino acid transport system permease protein
D RAK1035_0377 Branched-chain amino acid transport ATP-binding protein LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RAK1035_1381 Branched-chain amino acid transport ATP-binding protein LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RAK1035_2571 Benzoate transport, ATPase component K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RAK1035_2639 Urea ABC transporter, ATPase protein UrtD K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RAK1035_2762 Branched-chain amino acid transport ATP-binding protein LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RAK1035_2874 Branched-chain amino acid transport ATP-binding protein LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RAK1035_3288 Branched-chain amino acid transport ATP-binding protein LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RAK1035_0372 Branched-chain amino acid ABC transporter, ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RAK1035_1380 Branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RAK1035_2570 Benzoate transport, ATP binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RAK1035_2638 Branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RAK1035_2763 Branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RAK1035_2875 Branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RAK1035_3287 Branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RAK1035_0095 Urea ABC transporter, substrate binding protein UrtA K11959 urtA; urea transport system substrate-binding protein
D RAK1035_0608 Urea ABC transporter, urea binding protein K11959 urtA; urea transport system substrate-binding protein
D RAK1035_1641 Urea ABC transporter, urea binding protein K11959 urtA; urea transport system substrate-binding protein
D RAK1035_0094 Urea ABC transporter, permease protein UrtB K11960 urtB; urea transport system permease protein
D RAK1035_0607 Urea ABC transporter, permease protein UrtB K11960 urtB; urea transport system permease protein
D RAK1035_1642 Urea ABC transporter, permease protein UrtB K11960 urtB; urea transport system permease protein
D RAK1035_0093 Urea ABC transporter, permease protein UrtC K11961 urtC; urea transport system permease protein
D RAK1035_0606 Urea ABC transporter, permease protein UrtC K11961 urtC; urea transport system permease protein
D RAK1035_1643 Urea ABC transporter, permease protein UrtC K11961 urtC; urea transport system permease protein
D RAK1035_0092 Urea ABC transporter, ATPase protein UrtD K11962 urtD; urea transport system ATP-binding protein
D RAK1035_0605 Urea ABC transporter, ATPase protein UrtD K11962 urtD; urea transport system ATP-binding protein
D RAK1035_1644 Urea ABC transporter, ATPase protein UrtD K11962 urtD; urea transport system ATP-binding protein
D RAK1035_0091 Urea ABC transporter, ATPase protein UrtE K11963 urtE; urea transport system ATP-binding protein
D RAK1035_0604 Urea ABC transporter, ATPase protein UrtE K11963 urtE; urea transport system ATP-binding protein
D RAK1035_1645 Urea ABC transporter, ATPase protein UrtE K11963 urtE; urea transport system ATP-binding protein
D RAK1035_0753 Dipeptide-binding ABC transporter, periplasmic substrate-binding component K12368 dppA; dipeptide transport system substrate-binding protein
D RAK1035_0752 Dipeptide transport system permease protein DppB K12369 dppB; dipeptide transport system permease protein
D RAK1035_0751 Dipeptide transport system permease protein DppC K12370 dppC; dipeptide transport system permease protein
D RAK1035_0750 Dipeptide transport ATP-binding protein DppD K12371 dppD; dipeptide transport system ATP-binding protein
D RAK1035_0749 Dipeptide transport ATP-binding protein DppF K12372 dppF; dipeptide transport system ATP-binding protein
D RAK1035_1655 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA K13893 yejA; microcin C transport system substrate-binding protein
D RAK1035_1656 Oligopeptide transport system permease protein OppB K13894 yejB; microcin C transport system permease protein
D RAK1035_1657 Oligopeptide/dipeptide uptake family ABC transporter, permease protein K13895 yejE; microcin C transport system permease protein
D RAK1035_1658 Oligopeptide transport system permease protein OppB K13896 yejF; microcin C transport system ATP-binding protein
D RAK1035_2441 Zinc ABC transporter, periplasmic-binding protein ZnuA K09815 znuA; zinc transport system substrate-binding protein
D RAK1035_2438 Zinc ABC transporter, inner membrane permease protein ZnuB K09816 znuB; zinc transport system permease protein
D RAK1035_2439 Zinc ABC transporter, ATP-binding protein ZnuC K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D RAK1035_0562 Manganese ABC transporter, periplasmic-binding protein SitA K11707 troA; manganese/zinc/iron transport system substrate-binding protein
D RAK1035_0560 Manganese ABC transporter, inner membrane permease protein SitC K11708 troC; manganese/zinc/iron transport system permease protein
D RAK1035_0559 Manganese ABC transporter, inner membrane permease protein SitD K11709 troD; manganese/zinc/iron transport system permease protein
D RAK1035_0561 Manganese ABC transporter, ATP-binding protein SitB K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5]
D RAK1035_3019 Substrate-specific component BioY of biotin ECF transporter K03523 bioY; biotin transport system substrate-specific component
D RAK1035_0193 Capsule polysaccharide export inner-membrane protein K10107 kpsE; capsular polysaccharide transport system permease protein
D RAK1035_0871 Capsule polysaccharide export inner-membrane protein K10107 kpsE; capsular polysaccharide transport system permease protein
D RAK1035_0873 Structural element protein K09688 kpsM; capsular polysaccharide transport system permease protein
D RAK1035_0194 Capsular polysaccharide ABC transporter, ATP-binding protein KpsT K09689 kpsT; capsular polysaccharide transport system ATP-binding protein [EC:7.6.2.12]
D RAK1035_0870 Capsular polysaccharide ABC transporter, ATP-binding protein KpsT K09689 kpsT; capsular polysaccharide transport system ATP-binding protein [EC:7.6.2.12]
D RAK1035_2254 Lipoprotein releasing system transmembrane protein LolC K09808 lolC_E_F; lipoprotein-releasing system permease protein
D RAK1035_2600 Hypothetical protein K09808 lolC_E_F; lipoprotein-releasing system permease protein
D RAK1035_2253 Lipoprotein releasing system ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D RAK1035_2599 Lipoprotein releasing system ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D RAK1035_3665 Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE K02195 ccmC; heme exporter protein C
D RAK1035_3666 ABC transporter involved in cytochrome c biogenesis, CcmB subunit K02194 ccmB; heme exporter protein B
D RAK1035_3667 ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D RAK1035_2324 putative permease K07091 lptF; lipopolysaccharide export system permease protein
D RAK1035_2325 Permease, YjgP/YjgQ family K11720 lptG; lipopolysaccharide export system permease protein
D RAK1035_0919 Lipopolysaccharide ABC transporter, ATP-binding protein LptB K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D RAK1035_2281 Nitrous oxide reductase maturation transmembrane protein NosY K19341 nosY; Cu-processing system permease protein
D RAK1035_2282 Nitrous oxide reductase maturation protein NosF (ATPase) K19340 nosF; Cu-processing system ATP-binding protein
D RAK1035_0663 Cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D RAK1035_0662 Cell division transporter, ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D RAK1035_0011 Lipid A export ATP-binding/permease protein MsbA K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
D RAK1035_2621 Lipid A export ATP-binding/permease protein MsbA K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D RAK1035_3790 putative ATP-binding/permease fusion ABC transporter K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D RAK1035_0301 Type I secretion system ATPase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D RAK1035_1809 ABC transporter HlyB/MsbA family K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
C 02060 Phosphotransferase system (PTS) [PATH:rok02060]
D RAK1035_2131 Phosphocarrier protein, nitrogen regulation associated K02784 ptsH; phosphocarrier protein HPr
D RAK1035_2130 PTS system permease (IIAMan), nitrogen regulatory IIA protein K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D RAK1035_0062 Phosphoenolpyruvate-protein phosphotransferase, nitrogen regulation associated K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D RAK1035_0921 PTS system nitrogen-specific IIA component, PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
C 03070 Bacterial secretion system [PATH:rok03070]
D RAK1035_2784 Type I secretion outer membrane protein, TolC precursor K12340 tolC; outer membrane protein
D RAK1035_3670 Protein-export membrane protein SecD K12257 secDF; SecD/SecF fusion protein
D RAK1035_2626 Preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D RAK1035_3054 Preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D RAK1035_1217 Preprotein translocase secY subunit K03076 secY; preprotein translocase subunit SecY
D RAK1035_3671 Preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D RAK1035_1357 Inner membrane protein translocase component YidC, long form K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RAK1035_1308 Protein export cytoplasm protein SecA ATPase RNA helicase K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RAK1035_2498 Signal recognition particle receptor protein FtsY (alpha subunit) K03110 ftsY; fused signal recognition particle receptor
D RAK1035_1126 Export cytoplasm chaperone protein, SecB K03071 secB; preprotein translocase subunit SecB
D RAK1035_0856 Signal recognition particle, subunit Ffh SRP54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D RAK1035_3166 Twin-arginine translocation protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D RAK1035_3165 Twin-arginine translocation protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D RAK1035_3164 Twin-arginine translocation protein TatC K03118 tatC; sec-independent protein translocase protein TatC
D RAK1035_4017 Major pilus subunit of type IV secretion complex, VirB2 K03197 virB2; type IV secretion system protein VirB2
D RAK1035_4013 Minor pilin of type IV secretion complex, VirB5 K03200 virB5; type IV secretion system protein VirB5
D RAK1035_4011 Outer membrane and periplasm component, has secretin-like domain, VirB9 K03204 virB9; type IV secretion system protein VirB9
D RAK1035_4006 Inner membrane protein of type IV secretion of T-DNA complex, VirB6 K03201 virB6; type IV secretion system protein VirB6
D RAK1035_4012 Inner membrane protein forms channel for type IV secretion of T-DNA complex (VirB8) K03203 virB8; type IV secretion system protein VirB8
D RAK1035_4010 Inner membrane protein forms channel for type IV secretion of T-DNA complex (VirB10) K03195 virB10; type IV secretion system protein VirB10
D RAK1035_4015 ATPase K03199 virB4; type IV secretion system protein VirB4 [EC:7.4.2.8]
D RAK1035_4009 ATPase K03196 virB11; type IV secretion system protein VirB11 [EC:7.4.2.8]
D RAK1035_4001 Coupling protein VirD4, ATPase required for T-DNA transfer K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:rok02020]
D RAK1035_2988 Phosphate regulon sensor protein PhoR (SphS) K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D RAK1035_2994 Phosphate regulon transcriptional regulatory protein PhoB (SphR) K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D RAK1035_1310 OmpA domain protein K02040 pstS; phosphate transport system substrate-binding protein
D RAK1035_2989 Phosphate ABC transporter, periplasmic phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D RAK1035_3268 Sensor histidine kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D RAK1035_0216 DNA-binding response regulator PetR K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D RAK1035_0241 HtrA protease/chaperone protein K04771 degP; serine protease Do [EC:3.4.21.107]
D RAK1035_2745 HtrA protease/chaperone protein K04771 degP; serine protease Do [EC:3.4.21.107]
D RAK1035_1512 Flagellin protein FlaA K02406 fliC; flagellin
D RAK1035_2113 RNA polymerase sigma factor for flagellar operon K02405 fliA; RNA polymerase sigma factor FliA
D RAK1035_1471 Flagellar motor rotation protein MotA K02556 motA; chemotaxis protein MotA
D RAK1035_2109 Flagellar motor rotation protein MotA K02556 motA; chemotaxis protein MotA
D RAK1035_1859 Sensor protein torS K07647 torS; two-component system, OmpR family, sensor histidine kinase TorS [EC:2.7.13.3]
D RAK1035_1860 DNA-binding response regulator TorR K07772 torR; two-component system, OmpR family, torCAD operon response regulator TorR
D RAK1035_0762 Tricarboxylate transport membrane protein TctA K07793 tctA; putative tricarboxylic transport membrane protein
D RAK1035_1148 Tricarboxylate transport membrane protein TctA K07793 tctA; putative tricarboxylic transport membrane protein
D RAK1035_3875 Tricarboxylate transport membrane protein TctA K07793 tctA; putative tricarboxylic transport membrane protein
D RAK1035_1147 Tricarboxylate transport protein TctB K07794 tctB; putative tricarboxylic transport membrane protein
D RAK1035_3876 Tricarboxylate transport protein TctB K07794 tctB; putative tricarboxylic transport membrane protein
D RAK1035_0764 Tricarboxylate transport protein TctC K07795 tctC; putative tricarboxylic transport membrane protein
D RAK1035_1146 Tricarboxylate transport protein TctC K07795 tctC; putative tricarboxylic transport membrane protein
D RAK1035_3877 Tricarboxylate transport protein TctC K07795 tctC; putative tricarboxylic transport membrane protein
D RAK1035_3555 Heme A synthase, cytochrome oxidase biogenesis protein Cox15-CtaA K02259 COX15; heme a synthase [EC:1.17.99.9]
D RAK1035_1290 Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D RAK1035_2127 Sensor histidine kinase ChvG K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3]
D RAK1035_2126 DNA-binding response regulator ChvI K14981 chvI; two-component system, OmpR family, response regulator ChvI
D RAK1035_1141 Succinate dehydrogenase flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D RAK1035_1138 Succinate dehydrogenase iron-sulfur protein K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D RAK1035_1139 Succinate dehydrogenase hydrophobic anchor protein K00246 frdC; succinate dehydrogenase subunit C
D RAK1035_1140 Succinate dehydrogenase cytochrome b-556 subunit K00247 frdD; succinate dehydrogenase subunit D
D RAK1035_1883 Beta-carotene ketolase K10255 FAD6; acyl-lipid omega-6 desaturase (Delta-12 desaturase) [EC:1.14.19.23 1.14.19.45]
D RAK1035_3675 Fatty acid desaturase K10255 FAD6; acyl-lipid omega-6 desaturase (Delta-12 desaturase) [EC:1.14.19.23 1.14.19.45]
D RAK1035_0321 Flp pilus assembly protein, pilin Flp K02651 flp; pilus assembly protein Flp/PilA
D RAK1035_0322 Flp pilus assembly protein RcpC/CpaB K02279 cpaB; pilus assembly protein CpaB
D RAK1035_0323 Type II/IV secretion system secretin RcpA/CpaC, associated with Flp pilus assembly K02280 cpaC; pilus assembly protein CpaC
D RAK1035_0325 Type II/IV secretion system ATPase TadZ/CpaE, associated with Flp pilus assembly K02282 cpaE; pilus assembly protein CpaE
D RAK1035_0326 Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D RAK1035_0327 Flp pilus assembly protein TadB K12510 tadB; tight adherence protein B
D RAK1035_0328 Type II/IV secretion system protein TadC, associated with Flp pilus assembly K12511 tadC; tight adherence protein C
D RAK1035_0229 Protein-PII uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D RAK1035_3453 Nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1
D RAK1035_3030 Nitrogen regulation protein NtrB K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D RAK1035_3029 Nitrogen regulation protein NtrC K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D RAK1035_0947 Glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RAK1035_1865 Glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RAK1035_2880 Glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RAK1035_3437 Glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RAK1035_3439 Glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RAK1035_3454 Glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RAK1035_3028 Nitrogen regulation protein NtrY K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D RAK1035_3027 Nitrogen regulation protein NtrX K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D RAK1035_0792 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAK1035_0815 Acetyl-CoA acetyltransferase of ethylmalonyl-CoA pathway K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAK1035_1340 Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAK1035_1986 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAK1035_1798 Two component sensor kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D RAK1035_2908 C4-dicarboxylate transport sensor protein DctB K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D RAK1035_1799 Response regulator of zinc sigma-54-dependent two-component system K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
D RAK1035_3645 Uptake hydrogenase small subunit precursor K23548 hupU; uptake hydrogenase small subunit [EC:1.12.99.6]
D RAK1035_3644 Uptake hydrogenase large subunit K23549 hupV; uptake hydrogenase large subunit [EC:1.12.99.6]
D RAK1035_3646 Signal transduction histidine kinase HoxJ (hydrogenase regulation) K19661 hupT; two-component system, NtrC family, sensor histidine kinase HupT/HoxJ [EC:2.7.13.3]
D RAK1035_3630 Hydrogenase transcriptional regulatory protein hoxA K19641 hupR; two-component system, NtrC family, response regulator HupR/HoxA
D RAK1035_3642 Uptake hydrogenase small subunit precursor K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
D RAK1035_3641 Uptake hydrogenase large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6]
D RAK1035_3639 Ni,Fe-hydrogenase I cytochrome b subunit K03620 hyaC; Ni/Fe-hydrogenase 1 B-type cytochrome subunit
D RAK1035_2087 Chemotaxis protein methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D RAK1035_3362 Chemotaxis protein methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D RAK1035_2090 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D RAK1035_2756 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RAK1035_3364 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D RAK1035_3369 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RAK1035_2089 Positive regulator of CheA protein activity (CheW) K03408 cheW; purine-binding chemotaxis protein CheW
D RAK1035_3363 Putative CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D RAK1035_3365 Positive regulator of CheA protein activity (CheW) K03408 cheW; purine-binding chemotaxis protein CheW
D RAK1035_2086 Signal transduction histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RAK1035_2092 Signal transduction histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RAK1035_3366 Signal transduction histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RAK1035_3367 Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RAK1035_2088 Chemotaxis response regulator protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RAK1035_2091 Chemotaxis response regulator protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RAK1035_3361 Chemotaxis response regulator protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RAK1035_2710 Pole remodelling regulatory diguanylate cyclase K02488 pleD; two-component system, cell cycle response regulator [EC:2.7.7.65]
D RAK1035_3113 Sensory box histidine kinase/response regulator K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
D RAK1035_3209 Signal transduction histidine kinase K13588 chpT; histidine phosphotransferase ChpT
D RAK1035_2802 DNA-binding response regulator CtrA K13584 ctrA; two-component system, cell cycle response regulator CtrA
D RAK1035_0585 TRAP-type C4-dicarboxylate transport system, periplasmic component K11688 dctP; TRAP-type transport system periplasmic protein
D RAK1035_0697 TRAP-type C4-dicarboxylate transport system, periplasmic component K11688 dctP; TRAP-type transport system periplasmic protein
D RAK1035_0819 TRAP-type C4-dicarboxylate transport system, periplasmic component K11688 dctP; TRAP-type transport system periplasmic protein
D RAK1035_0927 TRAP-type C4-dicarboxylate transport system, periplasmic component K11688 dctP; TRAP-type transport system periplasmic protein
D RAK1035_0946 TRAP-type C4-dicarboxylate transport system, periplasmic component K11688 dctP; TRAP-type transport system periplasmic protein
D RAK1035_1053 TRAP-type C4-dicarboxylate transport system, periplasmic component K11688 dctP; TRAP-type transport system periplasmic protein
D RAK1035_1132 TRAP transporter solute receptor, unknown substrate 5 K11688 dctP; TRAP-type transport system periplasmic protein
D RAK1035_1250 TRAP-type C4-dicarboxylate transport system, periplasmic component K11688 dctP; TRAP-type transport system periplasmic protein
D RAK1035_1452 TRAP-type C4-dicarboxylate transport system, periplasmic component K11688 dctP; TRAP-type transport system periplasmic protein
D RAK1035_1711 TRAP transporter solute receptor, unknown substrate 4 K11688 dctP; TRAP-type transport system periplasmic protein
D RAK1035_1792 TRAP-type C4-dicarboxylate transport system, periplasmic component K11688 dctP; TRAP-type transport system periplasmic protein
D RAK1035_2057 TRAP-type transport system, periplasmic component, predicted N-acetylneuraminate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D RAK1035_2737 TRAP-type C4-dicarboxylate transport system, periplasmic component K11688 dctP; TRAP-type transport system periplasmic protein
D RAK1035_3617 TRAP transporter solute receptor, unknown substrate 7 K11688 dctP; TRAP-type transport system periplasmic protein
D RAK1035_4067 TRAP-type C4-dicarboxylate transport system, periplasmic component K11688 dctP; TRAP-type transport system periplasmic protein
D RAK1035_0584 TRAP-type transport system, small permease component, predicted N-acetylneuraminate transporter K11689 dctQ; TRAP-type transport system small permease protein
D RAK1035_0696 TRAP-type transport system, small permease component, predicted N-acetylneuraminate transporter K11689 dctQ; TRAP-type transport system small permease protein
D RAK1035_0820 TRAP-type transport system, small permease component, predicted N-acetylneuraminate transporter K11689 dctQ; TRAP-type transport system small permease protein
D RAK1035_0926 TRAP-type transport system, small permease component, predicted N-acetylneuraminate transporter K11689 dctQ; TRAP-type transport system small permease protein
D RAK1035_0944 TRAP-type transport system, small permease component, predicted N-acetylneuraminate transporter K11689 dctQ; TRAP-type transport system small permease protein
D RAK1035_1052 TRAP-type transport system, small permease component, predicted N-acetylneuraminate transporter K11689 dctQ; TRAP-type transport system small permease protein
D RAK1035_1131 TRAP dicarboxylate transporter, DctQ subunit, unknown substrate 5 K11689 dctQ; TRAP-type transport system small permease protein
D RAK1035_1249 TRAP-type transport system, small permease component, predicted N-acetylneuraminate transporter K11689 dctQ; TRAP-type transport system small permease protein
D RAK1035_1453 TRAP-type transport system, small permease component, predicted N-acetylneuraminate transporter K11689 dctQ; TRAP-type transport system small permease protein
D RAK1035_1712 TRAP dicarboxylate transporter, DctQ subunit, unknown substrate 4 K11689 dctQ; TRAP-type transport system small permease protein
D RAK1035_1793 TRAP-type transport system, small permease component, predicted N-acetylneuraminate transporter K11689 dctQ; TRAP-type transport system small permease protein
D RAK1035_2058 TRAP-type transport system, large permease component, predicted N-acetylneuraminate transporter K11689 dctQ; TRAP-type transport system small permease protein
D RAK1035_3618 TRAP dicarboxylate transporter, DctQ subunit, unknown substrate 7 K11689 dctQ; TRAP-type transport system small permease protein
D RAK1035_4058 TRAP dicarboxylate transporter, DctQ subunit, unknown substrate 6 K11689 dctQ; TRAP-type transport system small permease protein
D RAK1035_4065 TRAP-type transport system, small permease component, predicted N-acetylneuraminate transporter K11689 dctQ; TRAP-type transport system small permease protein
D RAK1035_0583 TRAP-type C4-dicarboxylate transport system, large permease component K11690 dctM; TRAP-type transport system large permease protein
D RAK1035_0695 TRAP-type C4-dicarboxylate transport system, large permease component K11690 dctM; TRAP-type transport system large permease protein
D RAK1035_0821 TRAP-type C4-dicarboxylate transport system, large permease component K11690 dctM; TRAP-type transport system large permease protein
D RAK1035_0925 TRAP-type C4-dicarboxylate transport system, large permease component K11690 dctM; TRAP-type transport system large permease protein
D RAK1035_0945 TRAP-type C4-dicarboxylate transport system, large permease component K11690 dctM; TRAP-type transport system large permease protein
D RAK1035_1051 TRAP-type C4-dicarboxylate transport system, large permease component K11690 dctM; TRAP-type transport system large permease protein
D RAK1035_1130 TRAP dicarboxylate transporter, DctM subunit, unknown substrate 5 K11690 dctM; TRAP-type transport system large permease protein
D RAK1035_1248 TRAP-type C4-dicarboxylate transport system, large permease component K11690 dctM; TRAP-type transport system large permease protein
D RAK1035_1454 TRAP-type C4-dicarboxylate transport system, large permease component K11690 dctM; TRAP-type transport system large permease protein
D RAK1035_1713 TRAP dicarboxylate transporter, DctM subunit, unknown substrate 4 K11690 dctM; TRAP-type transport system large permease protein
D RAK1035_1794 TRAP-type C4-dicarboxylate transport system, large permease component K11690 dctM; TRAP-type transport system large permease protein
D RAK1035_2059 TRAP-type transport system, large permease component, predicted N-acetylneuraminate transporter K11690 dctM; TRAP-type transport system large permease protein
D RAK1035_3619 TRAP dicarboxylate transporter, DctM subunit, unknown substrate 7 K11690 dctM; TRAP-type transport system large permease protein
D RAK1035_4066 TRAP-type C4-dicarboxylate transport system, large permease component K11690 dctM; TRAP-type transport system large permease protein
D RAK1035_2084 Flagellar regulatory protein FleQ K10943 flrC; two-component system, response regulator FlrC
D RAK1035_1048 Glutamate Aspartate transport ATP-binding protein GltL K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D RAK1035_1047 Glutamate Aspartate transport system permease protein GltK K10002 gltK; glutamate/aspartate transport system permease protein
D RAK1035_1046 Glutamate Aspartate transport system permease protein GltJ K10003 gltJ; glutamate/aspartate transport system permease protein
D RAK1035_1045 Glutamate Aspartate periplasmic binding protein precursor GltI K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D RAK1035_2657 cAMP-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RAK1035_2741 Transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RAK1035_3708 Glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D RAK1035_0902 Sensor histidine kinase PrrB (RegB) K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D RAK1035_0904 Dna binding response regulator PrrA (RegA) K15012 regA; two-component system, response regulator RegA
D RAK1035_3767 Photosynthetic reaction center M subunit K08929 pufM; photosynthetic reaction center M subunit
D RAK1035_3768 Photosynthetic reaction center L subunit K08928 pufL; photosynthetic reaction center L subunit
D RAK1035_3769 Light-harvesting LHI, alpha subunit K08926 pufA; light-harvesting complex 1 alpha chain
D RAK1035_3757 Photosynthetic reaction center H subunit K13991 puhA; photosynthetic reaction center H subunit
D RAK1035_1879 Ubiquinol-cytochrome C reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D RAK1035_4103 Ubiquinol-cytochrome C reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D RAK1035_1880 Ubiquinol--cytochrome c reductase, cytochrome B subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D RAK1035_1881 Ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D RAK1035_1164 Sulfite dehydrogenase cytochrome subunit SoxD K08738 CYC; cytochrome c
D RAK1035_2038 WD domain/cytochrome c family protein K08738 CYC; cytochrome c
D RAK1035_2515 Cytochrome c2 K08738 CYC; cytochrome c
D RAK1035_3764 Cytochrome c2 K08738 CYC; cytochrome c
D RAK1035_1662 Cytochrome c oxidase subunit CcoN K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D RAK1035_1663 Cytochrome c oxidase subunit CcoO K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D RAK1035_1664 Cytochrome c oxidase subunit CcoQ K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D RAK1035_1665 Cytochrome c oxidase subunit CcoP K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D RAK1035_2784 Type I secretion outer membrane protein, TolC precursor K12340 tolC; outer membrane protein
D RAK1035_0155 Capsular polysaccharide biosynthesis/export periplasmic protein WcbA K01991 wza; polysaccharide biosynthesis/export protein
D RAK1035_3550 Capsular polysaccharide biosynthesis/export periplasmic protein WcbA K01991 wza; polysaccharide biosynthesis/export protein
D RAK1035_1723 Signal transduction histidine kinase K20975 K20975; two-component system, sensor histidine kinase [EC:2.7.13.3]
D RAK1035_1101 Chemotaxis protein histidine kinase K20976 hptB; histidine phosphotransfer protein HptB
D RAK1035_2119 Negative regulator of flagellin synthesis flgM K02398 flgM; negative regulator of flagellin synthesis FlgM
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04082 Neuroactive ligand signaling
C 04081 Hormone signaling
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome [PATH:rok04146]
D RAK1035_1410 Alpha-methylacyl-CoA racemase K01796 AMACR; alpha-methylacyl-CoA racemase [EC:5.1.99.4]
D RAK1035_0378 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D RAK1035_1651 NADH pyrophosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D RAK1035_1714 Malonyl-CoA decarboxylase K01578 MLYCD; malonyl-CoA decarboxylase [EC:4.1.1.9]
D RAK1035_1251 Serine--glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D RAK1035_2341 Serine--glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D RAK1035_2561 Serine--glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D RAK1035_1450 Isocitrate dehydrogenase, NADP K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D RAK1035_3091 Hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D RAK1035_2177 Catalase K03781 katE; catalase [EC:1.11.1.6]
D RAK1035_0015 Superoxide dismutase, Fe K04564 SOD2; superoxide dismutase, Fe-Mn family [EC:1.15.1.1]
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis [PATH:rok04148]
D RAK1035_2840 Arginase K01476 rocF; arginase [EC:3.5.3.1]
D RAK1035_0038 Ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D RAK1035_1879 Ubiquinol-cytochrome C reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D RAK1035_4103 Ubiquinol-cytochrome C reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:rok02024]
D RAK1035_3340 RNA-binding protein Hfq K03666 hfq; host factor-I protein
D RAK1035_2683 Anthranilate synthase, aminase component K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D RAK1035_2677 Anthranilate synthase, amidotransferase component, Para-aminobenzoate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D RAK1035_2983 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase II K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D RAK1035_0967 Spermidine/putrescine-binding periplasmic protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D RAK1035_1600 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D RAK1035_1627 ABC transporter, binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D RAK1035_0965 Polyamine ABC transporter, permease protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D RAK1035_1598 Putrescine transport system permease protein potI K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D RAK1035_1624 ABC transporter permease protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D RAK1035_0966 Polyamine ABC transporter, permease protein K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D RAK1035_1599 ABC transporter permease protein K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D RAK1035_0968 Maltose/maltodextrin transport ATP-binding protein MalK K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D RAK1035_1601 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D RAK1035_1626 Putrescine transport ATP-binding protein PotA K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D RAK1035_0108 Urea ABC transporter, urea binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RAK1035_0373 Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RAK1035_1056 Branched-chain amino acid ABC transporter, amino acid-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RAK1035_1385 High-affinity leucine-specific transport system, periplasmic binding protein LivK K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RAK1035_1648 Urea ABC transporter, urea binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RAK1035_2574 Benzoate transport, extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RAK1035_2759 Branched-chain amino acid ABC transporter, amino acid-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RAK1035_2868 ABC transporter, periplasmic protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RAK1035_2871 ABC transporter, periplasmic protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RAK1035_3289 ABC-type branched-chain amino acid transport systems, periplasmic component K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RAK1035_3506 Branched-chain amino acid ABC transporter, amino acid-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RAK1035_0376 Branched-chain amino acid ABC transporter, permease protein K01997 livH; branched-chain amino acid transport system permease protein
D RAK1035_1057 High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein
D RAK1035_1383 High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein
D RAK1035_2573 Benzoate transport, inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D RAK1035_2641 High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein
D RAK1035_2760 High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein
D RAK1035_2872 High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein
D RAK1035_3286 High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein
D RAK1035_0374 Branched-chain amino acid transport system permease protein LivM K01998 livM; branched-chain amino acid transport system permease protein
D RAK1035_1058 ABC transporter ATP-binding/permease protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RAK1035_1382 Branched-chain amino acid transport system permease protein LivM K01998 livM; branched-chain amino acid transport system permease protein
D RAK1035_2572 Benzoate transport, inner-membrane translocator precursor K01998 livM; branched-chain amino acid transport system permease protein
D RAK1035_2640 Branched-chain amino acid transport system permease protein LivM K01998 livM; branched-chain amino acid transport system permease protein
D RAK1035_2761 Branched-chain amino acid transport system permease protein LivM K01998 livM; branched-chain amino acid transport system permease protein
D RAK1035_2873 Branched-chain amino acid transport system permease protein LivM K01998 livM; branched-chain amino acid transport system permease protein
D RAK1035_3285 Branched-chain amino acid transport system permease protein LivM K01998 livM; branched-chain amino acid transport system permease protein
D RAK1035_0377 Branched-chain amino acid transport ATP-binding protein LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RAK1035_1381 Branched-chain amino acid transport ATP-binding protein LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RAK1035_2571 Benzoate transport, ATPase component K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RAK1035_2639 Urea ABC transporter, ATPase protein UrtD K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RAK1035_2762 Branched-chain amino acid transport ATP-binding protein LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RAK1035_2874 Branched-chain amino acid transport ATP-binding protein LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RAK1035_3288 Branched-chain amino acid transport ATP-binding protein LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RAK1035_0372 Branched-chain amino acid ABC transporter, ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RAK1035_1380 Branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RAK1035_2570 Benzoate transport, ATP binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RAK1035_2638 Branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RAK1035_2763 Branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RAK1035_2875 Branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RAK1035_3287 Branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RAK1035_3792 T1SS secreted agglutinin RTX K20276 bapA; large repetitive protein
D RAK1035_0378 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D RAK1035_2657 cAMP-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RAK1035_2741 Transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RAK1035_2440 Zinc uptake regulation protein ZUR K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D RAK1035_3479 3,4-dihydroxy-2-butanone 4-phosphate synthase K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D RAK1035_0042 Diaminohydroxyphosphoribosylaminopyrimidine deaminase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D RAK1035_3173 5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D RAK1035_3016 Integral membrane protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D RAK1035_1225 ABC transporter, substrate binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RAK1035_1739 Oligopeptide/dipeptide ABC transporter, periplasmic substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RAK1035_2233 ABC transporter, substrate binding protein, oligopeptide, KO:K02035 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RAK1035_2258 Peptide/opine/nickel uptake family ABC transporter, periplasmic substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RAK1035_2343 Hypothetical Protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RAK1035_3006 ABC transporter, periplasmic substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RAK1035_3103 Oligopeptide/dipeptide ABC transporter, periplasmic substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RAK1035_1027 Oligopeptide/dipeptide ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RAK1035_1226 Ribose ABC transport system, permease protein RbsC K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RAK1035_2259 Peptide/nickel/opine uptake family ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RAK1035_2637 putative ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RAK1035_1028 Dipeptide transport system permease protein DppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RAK1035_1227 Ribose ABC transport system, permease protein RbsC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RAK1035_2260 Oligopeptide transport system permease protein OppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RAK1035_2636 Oligopeptide transport system permease protein OppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RAK1035_1029 Oligopeptide/dipeptide ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RAK1035_1228 Oligopeptide transport system permease protein OppB K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RAK1035_2257 Dipeptide transport ATP-binding protein DppD K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RAK1035_2635 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RAK1035_1357 Inner membrane protein translocase component YidC, long form K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RAK1035_3670 Protein-export membrane protein SecD K12257 secDF; SecD/SecF fusion protein
D RAK1035_2626 Preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D RAK1035_3054 Preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D RAK1035_1217 Preprotein translocase secY subunit K03076 secY; preprotein translocase subunit SecY
D RAK1035_3671 Preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D RAK1035_1308 Protein export cytoplasm protein SecA ATPase RNA helicase K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RAK1035_2498 Signal recognition particle receptor protein FtsY (alpha subunit) K03110 ftsY; fused signal recognition particle receptor
D RAK1035_1126 Export cytoplasm chaperone protein, SecB K03071 secB; preprotein translocase subunit SecB
D RAK1035_0856 Signal recognition particle, subunit Ffh SRP54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D RAK1035_1379 T1SS secreted agglutinin RTX
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:rok02030]
D RAK1035_2090 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D RAK1035_2756 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RAK1035_3364 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D RAK1035_3369 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RAK1035_0753 Dipeptide-binding ABC transporter, periplasmic substrate-binding component K12368 dppA; dipeptide transport system substrate-binding protein
D RAK1035_2086 Signal transduction histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RAK1035_2092 Signal transduction histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RAK1035_3366 Signal transduction histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RAK1035_2089 Positive regulator of CheA protein activity (CheW) K03408 cheW; purine-binding chemotaxis protein CheW
D RAK1035_3363 Putative CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D RAK1035_3365 Positive regulator of CheA protein activity (CheW) K03408 cheW; purine-binding chemotaxis protein CheW
D RAK1035_3367 Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RAK1035_2088 Chemotaxis response regulator protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RAK1035_2091 Chemotaxis response regulator protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RAK1035_3361 Chemotaxis response regulator protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RAK1035_2087 Chemotaxis protein methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D RAK1035_3362 Chemotaxis protein methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D RAK1035_0573 Flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D RAK1035_2081 Flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D RAK1035_0244 Flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D RAK1035_2585 Flagellar motor switch protein K02416 fliM; flagellar motor switch protein FliM
D RAK1035_0245 Flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D RAK1035_1465 Flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D RAK1035_1471 Flagellar motor rotation protein MotA K02556 motA; chemotaxis protein MotA
D RAK1035_2109 Flagellar motor rotation protein MotA K02556 motA; chemotaxis protein MotA
D RAK1035_1455 Flagellar motor rotation protein MotB K02557 motB; chemotaxis protein MotB
D RAK1035_2110 Flagellar motor rotation protein MotB K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:rok02040]
D RAK1035_1484 Flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D RAK1035_2083 Flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D RAK1035_1467 Flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D RAK1035_2082 Flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D RAK1035_0573 Flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D RAK1035_2081 Flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D RAK1035_2080 Flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D RAK1035_1488 Flagellum-specific ATP synthase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D RAK1035_2079 Flagellum-specific ATP synthase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D RAK1035_0242 TolA protein K02414 fliK; flagellar hook-length control protein FliK
D RAK1035_1515 Flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK
D RAK1035_0243 Flagellar protein K02415 fliL; flagellar protein FliL
D RAK1035_1468 Flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D RAK1035_1478 Hypothetical protein K02415 fliL; flagellar protein FliL
D RAK1035_0244 Flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D RAK1035_2585 Flagellar motor switch protein K02416 fliM; flagellar motor switch protein FliM
D RAK1035_0245 Flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D RAK1035_1465 Flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D RAK1035_0246 Hypothetical protein K02418 fliO; flagellar protein FliO/FliZ
D RAK1035_0247 Flagellar biosynthesis protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D RAK1035_1464 Flagellar biosynthesis protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D RAK1035_0248 Flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D RAK1035_1483 Flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D RAK1035_0249 Flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D RAK1035_1475 Flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D RAK1035_1474 Flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D RAK1035_2115 Flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D RAK1035_0250 Flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D RAK1035_1476 Flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D RAK1035_1480 Flagellar basal-body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D RAK1035_2118 Flagellar basal-body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D RAK1035_1486 Flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D RAK1035_3905 Flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D RAK1035_1485 Flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D RAK1035_3904 Flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D RAK1035_1516 Flagellar basal-body rod modification protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D RAK1035_3903 Flagellar basal-body rod modification protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D RAK1035_1456 Flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D RAK1035_3902 Flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D RAK1035_1482 Flagellar basal-body rod protein FlgG K02391 flgF; flagellar basal-body rod protein FlgF
D RAK1035_3901 Flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D RAK1035_1481 Flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D RAK1035_2099 Flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D RAK1035_1479 Flagellar L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D RAK1035_2100 Flagellar L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D RAK1035_1459 Flagellar P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D RAK1035_2101 Flagellar P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D RAK1035_1514 Flagellar protein flgJ, peptidoglycan hydrolase K02395 flgJ; peptidoglycan hydrolase FlgJ
D RAK1035_2102 Flagellar protein FlgJ, peptidoglycan hydrolase K02395 flgJ; peptidoglycan hydrolase FlgJ
D RAK1035_1457 Flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D RAK1035_2103 Flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D RAK1035_1458 Flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D RAK1035_2104 Flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D RAK1035_2116 Hypothetical protein K09860 flgP; outer membrane protein FlgP
D RAK1035_1512 Flagellin protein FlaA K02406 fliC; flagellin
D RAK1035_2111 Flagellar hook-associated protein FliD K02407 fliD; flagellar hook-associated protein 2
D RAK1035_2093 Flagellar biosynthesis protein FliS K02422 fliS; flagellar secretion chaperone FliS
D RAK1035_1471 Flagellar motor rotation protein MotA K02556 motA; chemotaxis protein MotA
D RAK1035_2109 Flagellar motor rotation protein MotA K02556 motA; chemotaxis protein MotA
D RAK1035_1455 Flagellar motor rotation protein MotB K02557 motB; chemotaxis protein MotB
D RAK1035_2110 Flagellar motor rotation protein MotB K02557 motB; chemotaxis protein MotB
D RAK1035_2119 Negative regulator of flagellin synthesis flgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D RAK1035_3809 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D RAK1035_2084 Flagellar regulatory protein FleQ K10943 flrC; two-component system, response regulator FlrC
D RAK1035_2113 RNA polymerase sigma factor for flagellar operon K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D RAK1035_3647 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04981 Folate transport and metabolism [PATH:rok04981]
D RAK1035_0172 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
D RAK1035_2672 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
D RAK1035_0118 Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RAK1035_2660 Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RAK1035_2854 Pterin-binding enzyme domain protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D RAK1035_2903 Betaine--homocysteine S-methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04980 Cobalamin transport and metabolism [PATH:rok04980]
D RAK1035_2137 ATP:Cob(I)alamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D RAK1035_0683 Putative periplasmic protein kinase ArgK K07588 MMAA; GTPase [EC:3.6.5.-]
D RAK1035_3908 Methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D RAK1035_2854 Pterin-binding enzyme domain protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D RAK1035_2903 Betaine--homocysteine S-methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
C 04382 Cornified envelope formation
D RAK1035_1574 Histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D RAK1035_1585 Histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:rok01501]
D RAK1035_3150 Beta N-acetyl-glucosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D RAK1035_2200 Transcriptional regulator, LysR family K17850 ampR; LysR family transcriptional regulator, regulator of gene expression of beta-lactamase
D RAK1035_2199 Beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D RAK1035_0593 RND efflux system, membrane fusion protein CmeA K03585 acrA; membrane fusion protein, multidrug efflux system
D RAK1035_2848 HlyD family secretion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D RAK1035_0592 RND efflux system, inner membrane transporter CmeB K18138 acrB; multidrug efflux pump
D RAK1035_2847 RND multidrug efflux transporter K18138 acrB; multidrug efflux pump
D RAK1035_2784 Type I secretion outer membrane protein, TolC precursor K12340 tolC; outer membrane protein
D RAK1035_3168 Penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D RAK1035_0423 Penicillin-binding protein 2 (PBP-2) K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D RAK1035_2483 Cell division protein FtsI, Peptidoglycan synthetase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:rok01502]
D RAK1035_3894 D-alanine--D-alanine ligase B K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RAK1035_3008 Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D RAK1035_2485 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D RAK1035_2486 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D RAK1035_3898 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:rok01503]
D RAK1035_0877 Alkaline phosphatase K01406 prtC; serralysin [EC:3.4.24.40]
D RAK1035_0878 Flagellar hook-length control protein FliK K01406 prtC; serralysin [EC:3.4.24.40]
D RAK1035_2775 Alkaline phosphatase K01406 prtC; serralysin [EC:3.4.24.40]
D RAK1035_2939 Alkaline phosphatase K01406 prtC; serralysin [EC:3.4.24.40]
D RAK1035_2971 Alkaline phosphatase K01406 prtC; serralysin [EC:3.4.24.40]
D RAK1035_3169 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D RAK1035_0241 HtrA protease/chaperone protein K04771 degP; serine protease Do [EC:3.4.21.107]
D RAK1035_2745 HtrA protease/chaperone protein K04771 degP; serine protease Do [EC:3.4.21.107]
D RAK1035_0593 RND efflux system, membrane fusion protein CmeA K03585 acrA; membrane fusion protein, multidrug efflux system
D RAK1035_2848 HlyD family secretion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D RAK1035_0592 RND efflux system, inner membrane transporter CmeB K18138 acrB; multidrug efflux pump
D RAK1035_2847 RND multidrug efflux transporter K18138 acrB; multidrug efflux pump
D RAK1035_2784 Type I secretion outer membrane protein, TolC precursor K12340 tolC; outer membrane protein
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:rok01000]
C 01001 Protein kinases [BR:rok01001]
D RAK1035_1984 Serine-protein kinase RsbW K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D RAK1035_0552 Exopolysaccharide biosynthesis domain protein K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D RAK1035_2988 Phosphate regulon sensor protein PhoR (SphS) K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D RAK1035_3268 Sensor histidine kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D RAK1035_1859 Sensor protein torS K07647 torS; two-component system, OmpR family, sensor histidine kinase TorS [EC:2.7.13.3]
D RAK1035_2127 Sensor histidine kinase ChvG K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3]
D RAK1035_2735 Sensor histidine kinase K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3]
D RAK1035_3030 Nitrogen regulation protein NtrB K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D RAK1035_3028 Nitrogen regulation protein NtrY K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D RAK1035_1798 Two component sensor kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D RAK1035_2908 C4-dicarboxylate transport sensor protein DctB K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D RAK1035_3646 Signal transduction histidine kinase HoxJ (hydrogenase regulation) K19661 hupT; two-component system, NtrC family, sensor histidine kinase HupT/HoxJ [EC:2.7.13.3]
D RAK1035_2436 Signal transduction histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D RAK1035_2086 Signal transduction histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RAK1035_2092 Signal transduction histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RAK1035_3366 Signal transduction histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RAK1035_3113 Sensory box histidine kinase/response regulator K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
D RAK1035_0902 Sensor histidine kinase PrrB (RegB) K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D RAK1035_1723 Signal transduction histidine kinase K20975 K20975; two-component system, sensor histidine kinase [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:rok01009]
D RAK1035_1003 Adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D RAK1035_1335 Phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:rok01002]
D RAK1035_1899 Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D RAK1035_4041 Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D RAK1035_4057 Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D RAK1035_0331 Type IV prepilin peptidase TadV/CpaA K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D RAK1035_3638 Hydrogenase maturation protease K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-]
D RAK1035_2824 GMP synthase, glutamine-hydrolyzing K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D RAK1035_0128 Glutamine amidotransferase, class I K07010 K07010; putative glutamine amidotransferase
D RAK1035_0783 Para-aminobenzoate synthase, amidotransferase component K07010 K07010; putative glutamine amidotransferase
D RAK1035_3017 Amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D RAK1035_1017 Glutamate synthase, NADPH large chain K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D RAK1035_0867 Glucosamine--fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D RAK1035_1092 ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein K16291 erfK; L,D-transpeptidase ErfK/SrfK
D RAK1035_2418 ErfK/YbiS/YcfS/YnhG family protein K16291 erfK; L,D-transpeptidase ErfK/SrfK
D RAK1035_2834 L,D-transpeptidase YcbB K21470 ycbB; L,D-transpeptidase YcbB
D RAK1035_2204 Conserved protein YyaK K07052 K07052; CAAX protease family protein
D RAK1035_3682 CAAX amino terminal protease family protein K07052 K07052; CAAX protease family protein
D RAK1035_3866 CAAX amino terminal protease family protein K07052 K07052; CAAX protease family protein
D RAK1035_0131 Membrane alanine aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D RAK1035_0190 Dipeptidyl carboxypeptidase Dcp K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5]
D RAK1035_0079 Oligoendopeptidase F K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D RAK1035_0877 Alkaline phosphatase K01406 prtC; serralysin [EC:3.4.24.40]
D RAK1035_0878 Flagellar hook-length control protein FliK K01406 prtC; serralysin [EC:3.4.24.40]
D RAK1035_2775 Alkaline phosphatase K01406 prtC; serralysin [EC:3.4.24.40]
D RAK1035_2939 Alkaline phosphatase K01406 prtC; serralysin [EC:3.4.24.40]
D RAK1035_2971 Alkaline phosphatase K01406 prtC; serralysin [EC:3.4.24.40]
D RAK1035_1896 Peptidase, M16 family K07263 pqqL; zinc protease [EC:3.4.24.-]
D RAK1035_1897 Peptidase, M16 family K07263 pqqL; zinc protease [EC:3.4.24.-]
D RAK1035_0788 Peptidase B K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D RAK1035_2323 Cytosol aminopeptidase PepA K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D RAK1035_2549 Microsomal dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D RAK1035_0364 N-succinyl-L,L-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D RAK1035_0657 Acetylornithine deacetylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D RAK1035_0162 Methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D RAK1035_2207 Methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D RAK1035_2354 Xaa-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D RAK1035_3554 Thermostable carboxypeptidase 1 K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19]
D RAK1035_1207 Cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D RAK1035_3292 Cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D RAK1035_2644 putative protease htpX-like protein K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D RAK1035_3834 Membrane-associated zinc metalloprotease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D RAK1035_1348 Murein endopeptidase K07261 mepA; penicillin-insensitive murein DD-endopeptidase [EC:3.4.24.-]
D RAK1035_1399 Trypsin domain protein K04775 ydgD; protease YdgD [EC:3.4.21.-]
D RAK1035_1400 Hypothetical protein K04775 ydgD; protease YdgD [EC:3.4.21.-]
D RAK1035_0241 HtrA protease/chaperone protein K04771 degP; serine protease Do [EC:3.4.21.107]
D RAK1035_2745 HtrA protease/chaperone protein K04771 degP; serine protease Do [EC:3.4.21.107]
D RAK1035_2202 Prolyl endopeptidase K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26]
D RAK1035_2306 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D RAK1035_2507 D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D RAK1035_0486 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D RAK1035_3221 ATP-dependent protease La Type I K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D RAK1035_3373 SOS-response repressor and protease LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D RAK1035_0281 Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D RAK1035_1081 Proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D RAK1035_3718 Carboxyl-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D RAK1035_3512 Penicillin amidase family protein K01434 pac; penicillin G amidase [EC:3.5.1.11]
D RAK1035_4044 Penicillin amidase family protein K01434 pac; penicillin G amidase [EC:3.5.1.11]
D RAK1035_2145 Rhomboid family serine protease K07059 K07059; rhomboid family protein
D RAK1035_3497 Gene Transfer Agent prohead protease K06904 GP4; Escherichia/Staphylococcus phage prohead protease
D RAK1035_0893 ATP-dependent protease HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D RAK1035_1530 Gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RAK1035_1983 Gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RAK1035_1054 Gamma-glutamyltranspeptidase K22602 hpxW; oxamate amidohydrolase [EC:3.5.1.126]
D RAK1035_1912 TldE protein, part of TldE/TldD proteolytic complex K03592 pmbA; PmbA protein
D RAK1035_0312 TldD protein, part of TldE/TldD proteolytic complex K03568 tldD; TldD protein
D RAK1035_0239 HflC protein K04087 hflC; modulator of FtsH protease HflC
D RAK1035_0238 HflK protein K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases [BR:rok01003]
D RAK1035_0209 Glycosyl transferase, group 1 family protein K13668 pimB; phosphatidyl-myo-inositol dimannoside synthase [EC:2.4.1.346]
D RAK1035_1018 Monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D RAK1035_3168 Penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D RAK1035_3899 Cell division protein FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D RAK1035_0424 Rod shape-determining protein RodA K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D RAK1035_0909 Glucans biosynthesis glucosyltransferase H K03669 mdoH; membrane glycosyltransferase [EC:2.4.1.-]
D RAK1035_3176 Glucans biosynthesis glucosyltransferase H K03669 mdoH; membrane glycosyltransferase [EC:2.4.1.-]
D RAK1035_0459 Glycosyltransferase involved in cell wall biogenesis K13693 gpgS; glucosyl-3-phosphoglycerate synthase [EC:2.4.1.266]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:rok01005]
D RAK1035_1895 Tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D RAK1035_2957 Lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D RAK1035_2959 Lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D RAK1035_1894 Lipid IVA 3-deoxy-D-manno-octulosonic acid transferase, often with also K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D RAK1035_0192 2-Keto-3-deoxy-D-manno-octulosonate-8-phosphate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D RAK1035_0997 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D RAK1035_3737 Arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D RAK1035_1788 Glycosyl transferase, family 2 K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:rok01011]
D RAK1035_0417 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D RAK1035_3895 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D RAK1035_3897 UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D RAK1035_0009 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D RAK1035_2484 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D RAK1035_3894 D-alanine--D-alanine ligase B K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RAK1035_3008 Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D RAK1035_3385 Glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D RAK1035_2486 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D RAK1035_3898 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D RAK1035_1015 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D RAK1035_1866 putative peptidoglycan lipid II flippase MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D RAK1035_2941 putative peptidoglycan lipid II flippase MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D RAK1035_3168 Penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D RAK1035_0423 Penicillin-binding protein 2 (PBP-2) K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D RAK1035_2483 Cell division protein FtsI, Peptidoglycan synthetase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D RAK1035_2306 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D RAK1035_2507 D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D RAK1035_1018 Monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D RAK1035_3899 Cell division protein FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D RAK1035_0424 Rod shape-determining protein RodA K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D RAK1035_1092 ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein K16291 erfK; L,D-transpeptidase ErfK/SrfK
D RAK1035_2418 ErfK/YbiS/YcfS/YnhG family protein K16291 erfK; L,D-transpeptidase ErfK/SrfK
D RAK1035_2834 L,D-transpeptidase YcbB K21470 ycbB; L,D-transpeptidase YcbB
D RAK1035_1348 Murein endopeptidase K07261 mepA; penicillin-insensitive murein DD-endopeptidase [EC:3.4.24.-]
D RAK1035_1449 Soluble lytic murein transglycosylase precursor K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D RAK1035_1039 Membrane-bound lytic murein transglycosylase A precursor K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29]
D RAK1035_0567 Membrane-bound lytic murein transglycosylase B precursor K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D RAK1035_2261 Protein YceG like K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D RAK1035_3169 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D RAK1035_2242 N-acetylmuramoyl-L-alanine amidase K11066 amiD; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:rok01004]
D RAK1035_3472 Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D RAK1035_3135 3-oxoacyl-acyl-carrier-protein synthase, KASIII K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D RAK1035_3807 3-oxoacyl-acyl-carrier-protein synthase, KASI K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D RAK1035_2262 3-oxoacyl-acyl-carrier-protein synthase, KASII K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D RAK1035_3143 Malonyl CoA-acyl carrier protein transacylase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D RAK1035_1523 Toluenesulfonate zinc-independent alcohol dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RAK1035_2790 Oxidoreductase, short chain dehydrogenase/reductase family K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RAK1035_3471 3-oxoacyl-acyl-carrier protein reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RAK1035_0045 3-hydroxyacyl-acyl-carrier-protein dehydratase, FabA form K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D RAK1035_3058 3-hydroxyacyl-acyl-carrier-protein dehydratase, FabZ form K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D RAK1035_2688 Enoyl-acyl-carrier-protein reductase, NADH K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D RAK1035_3806 Enoyl-acyl-carrier-protein reductase, NADH K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D RAK1035_4104 Enoyl-acyl-carrier-protein reductase, NADH K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D RAK1035_2546 Arylesterase precursor K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D RAK1035_2948 GDSL-like lipase/acylhydrolase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D RAK1035_1883 Beta-carotene ketolase K10255 FAD6; acyl-lipid omega-6 desaturase (Delta-12 desaturase) [EC:1.14.19.23 1.14.19.45]
D RAK1035_3675 Fatty acid desaturase K10255 FAD6; acyl-lipid omega-6 desaturase (Delta-12 desaturase) [EC:1.14.19.23 1.14.19.45]
D RAK1035_0532 Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RAK1035_3098 Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RAK1035_2656 Acetyl-coenzyme A synthetase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D RAK1035_0378 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D RAK1035_2442 Long-chain-fatty-acid--CoA ligase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D RAK1035_2950 Long-chain-fatty-acid--CoA ligase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D RAK1035_1353 Acyltransferase family protein associated with ethylmalonyl-CoA pathway K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D RAK1035_3134 Phosphate:acyl-ACP acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D RAK1035_0431 Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D RAK1035_0664 Acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:rok01008]
D RAK1035_2758 Aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D RAK1035_2930 Aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
C 01006 Prenyltransferases [BR:rok01006]
D RAK1035_2979 Octaprenyl diphosphate synthase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D RAK1035_3777 Geranylgeranyl pyrophosphate synthetase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D RAK1035_1318 Decaprenyl diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D RAK1035_3837 Undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D RAK1035_2727 Phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D RAK1035_3355 Phytoene/squalene synthetase-like protein K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D RAK1035_3840 tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D RAK1035_3732 4-hydroxybenzoate polyprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D RAK1035_0310 Cytochrome c oxidase polypeptide I K02257 COX10; heme o synthase [EC:2.5.1.141]
D RAK1035_3747 Chlorophyll a synthase ChlG K04040 chlG; chlorophyll/bacteriochlorophyll a synthase [EC:2.5.1.62 2.5.1.133]
C 01007 Amino acid related enzymes [BR:rok01007]
D RAK1035_1490 Lysyl-tRNA synthetase (class I) K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D RAK1035_2521 Glutamyl-tRNA(Gln) synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RAK1035_3375 Glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RAK1035_2809 Glutamyl-Q-tRNA synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D RAK1035_3185 Tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RAK1035_1868 Tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D RAK1035_3357 Cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D RAK1035_3152 Arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RAK1035_0337 Methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D RAK1035_3426 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D RAK1035_0040 Valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D RAK1035_2015 Leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RAK1035_0351 Aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RAK1035_0635 Histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D RAK1035_2471 Glycyl-tRNA synthetase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D RAK1035_2473 Glycyl-tRNA synthetase beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D RAK1035_3672 Seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D RAK1035_2255 Prolyl-tRNA synthetase, bacterial type K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D RAK1035_0349 Threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D RAK1035_3110 Alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D RAK1035_1297 Phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D RAK1035_1284 Phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D RAK1035_3410 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RAK1035_1706 Aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D RAK1035_0146 Aspartate aminotransferase K12252 aruH; arginine:pyruvate transaminase [EC:2.6.1.84]
D RAK1035_0203 Biosynthetic Aromatic amino acid aminotransferase beta K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RAK1035_2552 Histidinol-phosphate aminotransferase, Biosynthetic Aromatic amino acid aminotransferase beta K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RAK1035_1022 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D RAK1035_3652 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37]
D RAK1035_3763 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37]
D RAK1035_2953 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D RAK1035_2066 Bifunctional PLP-dependent enzyme K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D RAK1035_3349 Acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D RAK1035_1008 Diaminobutyrate-pyruvate aminotransferase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D RAK1035_1168 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase K12256 spuC; putrescine---pyruvate transaminase [EC:2.6.1.113]
D RAK1035_0806 Taurine--pyruvate aminotransferase K03851 tpa; taurine-pyruvate aminotransferase [EC:2.6.1.77]
D RAK1035_2212 Siderophore biosynthesis diaminobutyrate--2-oxoglutarate aminotransferase K00596 E4.1.1.64; 2,2-dialkylglycine decarboxylase (pyruvate) [EC:4.1.1.64]
D RAK1035_1565 Glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D RAK1035_1034 D-alanine aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D RAK1035_0214 Branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RAK1035_1032 Aminotransferase, class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RAK1035_1251 Serine--glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D RAK1035_2341 Serine--glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D RAK1035_2561 Serine--glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D RAK1035_1336 Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00199 Cytochrome P450 [BR:rok00199]
C 00194 Photosynthesis proteins [BR:rok00194]
D RAK1035_0165 ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D RAK1035_0166 ATP synthase beta chain K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D RAK1035_0167 ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D RAK1035_0168 ATP synthase alpha chain K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D RAK1035_0169 ATP synthase delta chain K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D RAK1035_0846 ATP synthase F0 sector subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D RAK1035_0847 ATP synthase B' chain K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D RAK1035_0848 ATP synthase F0 sector subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D RAK1035_0849 ATP synthase F0 sector subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D RAK1035_0850 ATP synthase protein I K02116 atpI; ATP synthase protein I
D RAK1035_3768 Photosynthetic reaction center L subunit K08928 pufL; photosynthetic reaction center L subunit
D RAK1035_3767 Photosynthetic reaction center M subunit K08929 pufM; photosynthetic reaction center M subunit
D RAK1035_3757 Photosynthetic reaction center H subunit K13991 puhA; photosynthetic reaction center H subunit
D RAK1035_3766 Photosynthetic reaction center cytochrome c subunit K13992 pufC; photosynthetic reaction center cytochrome c subunit
D RAK1035_3769 Light-harvesting LHI, alpha subunit K08926 pufA; light-harvesting complex 1 alpha chain
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:rok03000]
D RAK1035_1817 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RAK1035_3649 Modification methylase HhaI K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RAK1035_2179 Transcriptional regulator, AraC family K07506 K07506; AraC family transcriptional regulator
D RAK1035_1493 ADA regulatory protein K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D RAK1035_1995 Transcriptional regulator, AraC family K17736 cdhR; AraC family transcriptional regulator, carnitine catabolism transcriptional activator
D RAK1035_1555 Transcriptional regulator, AraC family K21826 gbdR; AraC family transcriptional regulator, glycine betaine-responsive activator
D RAK1035_2892 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain K21826 gbdR; AraC family transcriptional regulator, glycine betaine-responsive activator
D RAK1035_2982 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain K21826 gbdR; AraC family transcriptional regulator, glycine betaine-responsive activator
D RAK1035_3170 Transcriptional regulator, AraC family protein K21826 gbdR; AraC family transcriptional regulator, glycine betaine-responsive activator
D RAK1035_0117 Glycine cleavage system transcriptional activator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D RAK1035_1667 AHCY transcriptional activator hvrB K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D RAK1035_2995 Transcriptional regulator, LysR family K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D RAK1035_0058 Transcriptional activator MetR K03576 metR; LysR family transcriptional regulator, regulator for metE and metH
D RAK1035_1361 Transcriptional regulator, LysR family K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA
D RAK1035_2249 Hydrogen peroxide-inducible genes activator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D RAK1035_2831 Hydrogen peroxide-inducible genes activator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D RAK1035_2226 Transcriptional regulator, LysR family K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D RAK1035_2200 Transcriptional regulator, LysR family K17850 ampR; LysR family transcriptional regulator, regulator of gene expression of beta-lactamase
D RAK1035_0983 LysR-family transcriptional regulator K19338 nac; LysR family transcriptional regulator, nitrogen assimilation regulatory protein
D RAK1035_0698 Transcriptional regulator, LysR family K21645 hypT; LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT
D RAK1035_1043 Hypothetical protein K21645 hypT; LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT
D RAK1035_1282 Hypothetical protein K21645 hypT; LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT
D RAK1035_2050 Regulatory protein, LysR:LysR, substrate-binding K23773 hdfR; LysR family transcriptional regulator, flagellar master operon regulator
D RAK1035_0468 Glycerol-3-phosphate regulon repressor, DeoR family K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D RAK1035_0773 Glycerol-3-phosphate regulon repressor, DeoR family K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D RAK1035_0761 Transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D RAK1035_0817 Transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D RAK1035_1775 putative Xylose regulator from LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D RAK1035_1183 Transcriptional regulator, LacI family K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
D RAK1035_2055 Transcriptional regulator, LacI family K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
D RAK1035_0260 Transcriptional regulator PhnF K02043 phnF; GntR family transcriptional regulator, phosphonate transport system regulatory protein
D RAK1035_0760 Transcriptional regulator PhnF K02043 phnF; GntR family transcriptional regulator, phosphonate transport system regulatory protein
D RAK1035_1502 Histidine utilization repressor K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor
D RAK1035_1577 Histidine utilization repressor K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor
D RAK1035_1688 Glycolate utilization operon transcriptional activator GlcC K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D RAK1035_0730 Transcriptional regulator, MocR family, putative Taurine regulator tauR K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D RAK1035_1629 Transcriptional regulator, GntR family domain K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D RAK1035_2234 HTH-type transcriptional regulator BetI K02167 betI; TetR/AcrR family transcriptional regulator, transcriptional repressor of bet genes
D RAK1035_1679 Transcriptional regulator RutR of pyrimidine catabolism (TetR family) K09017 rutR; TetR/AcrR family transcriptional regulator
D RAK1035_0594 Transcriptional regulator, TetR family protein K19736 aefR; TetR/AcrR family transcriptional regulator, regulator of autoinduction and epiphytic fitness
D RAK1035_0951 Transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D RAK1035_1024 Transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D RAK1035_2148 PutR, transcriptional activator of PutA and PutP K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D RAK1035_3870 Transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D RAK1035_0744 Leucine-responsive regulatory protein K15782 doeX; Lrp/AsnC family transcriptional regulator, regulator of ectoine-degradation genes
D RAK1035_0971 Leucine-responsive regulatory protein K15782 doeX; Lrp/AsnC family transcriptional regulator, regulator of ectoine-degradation genes
D RAK1035_2270 Transcriptional regulator, AsnC family K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
D RAK1035_3231 Transcriptional regulator, AsnC family K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
D RAK1035_1531 Cu(I)-responsive transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D RAK1035_3749 PpaA, heme-binding SCHIC domain sensory protein, regulator for photosystem formation K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator
D RAK1035_3434 Manganese uptake regulation protein MUR K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D RAK1035_2440 Zinc uptake regulation protein ZUR K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D RAK1035_0046 Iron-responsive regulator Irr K09826 irr; Fur family transcriptional regulator, iron response regulator
D RAK1035_0941 Transcriptional regulator, IclR family K13641 iclR; IclR family transcriptional regulator, acetate operon repressor
D RAK1035_3850 Transcriptional regulator, IclR family K13641 iclR; IclR family transcriptional regulator, acetate operon repressor
D RAK1035_2657 cAMP-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RAK1035_2741 Transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RAK1035_1660 cAMP-binding protein K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D RAK1035_2357 Transcriptional regulator, Crp/Fnr family K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D RAK1035_3046 Iron-sulfur cluster regulator IscR K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D RAK1035_0173 Nitrite-sensitive transcriptional repressor NsrR K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
D RAK1035_2287 Nitrite-sensitive transcriptional repressor NsrR K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
D RAK1035_2524 Iron-responsive repressor RirA K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
D RAK1035_0986 Transcriptional regulator, ArsR family K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D RAK1035_2511 Arsenate reductase K23988 arsR-arsC; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor / arsenate reductase (thioredoxin) [EC:1.20.4.4]
D RAK1035_4055 Regulatory protein, ArsR K21885 cmtR; ArsR family transcriptional regulator, cadmium/lead-responsive transcriptional repressor
D RAK1035_0487 Transcriptional regulator SoxR K22042 hlyU; ArsR family transcriptional regulator, virulence genes transcriptional regulator
D RAK1035_1153 Transcriptional regulator SoxR K22042 hlyU; ArsR family transcriptional regulator, virulence genes transcriptional regulator
D RAK1035_1855 Transcriptional regulator, XRE family K21686 prpR; XRE family transcriptional regulator, fatty acid utilization regulator
D RAK1035_2589 Transcriptional regulator K21686 prpR; XRE family transcriptional regulator, fatty acid utilization regulator
D RAK1035_3874 Transcriptional regulator, XRE family K07110 ramB; XRE family transcriptional regulator, fatty acid utilization regulator
D RAK1035_4046 Mn-dependent transcriptional regulator MntR K11924 mntR; DtxR family transcriptional regulator, manganese transport regulator
D RAK1035_3346 Biotin--protein ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D RAK1035_1618 Formate hydrogenlyase transcriptional activator K12146 hyfR; hydrogenase-4 transcriptional activator
D RAK1035_0456 DNA-binding domain of ModE K02019 modE; molybdate transport system regulatory protein
D RAK1035_2147 Proline dehydrogenase (Proline oxidase) K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D RAK1035_2285 Nitrous oxide reductase maturation protein NosR K19339 nosR; NosR/NirI family transcriptional regulator, nitrous oxide reductase regulator
D RAK1035_1115 Chromosome (plasmid) partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RAK1035_2400 ParB-like nuclease domain protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RAK1035_3980 Putative plasmid stabilization protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RAK1035_0071 CarD-like transcriptional regulator K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D RAK1035_1111 Heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D RAK1035_1267 thiaminease II involved in salvage of thiamine pyrimidine moiety K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D RAK1035_2718 Thiaminase II K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D RAK1035_1877 Negative transcriptional regulator K07734 paiB; transcriptional regulator
D RAK1035_3262 UPF0301 protein YqgE K07735 algH; putative transcriptional regulator
D RAK1035_3244 C4-type zinc finger protein, DksA/TraR family K06204 dksA; RNA polymerase-binding transcription factor
D RAK1035_0043 Ribonucleotide reductase transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR
D RAK1035_2480 Cell division protein MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:rok03021]
D RAK1035_1221 DNA-directed RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D RAK1035_2633 DNA-directed RNA polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D RAK1035_2634 DNA-directed RNA polymerase beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D RAK1035_0287 DNA-directed RNA polymerase omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D RAK1035_3809 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D RAK1035_1971 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D RAK1035_1998 RNA polymerase sigma-70 factor, ECF family K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D RAK1035_3575 RNA polymerase sigma-70 factor, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D RAK1035_0082 RNA polymerase sigma factor RpoH K03089 rpoH; RNA polymerase sigma-32 factor
D RAK1035_0185 RNA polymerase sigma factor RpoH-related protein K03089 rpoH; RNA polymerase sigma-32 factor
D RAK1035_2113 RNA polymerase sigma factor for flagellar operon K02405 fliA; RNA polymerase sigma factor FliA
D RAK1035_1302 Transcription termination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D RAK1035_0113 Transcription termination protein NusB K03625 nusB; transcription antitermination protein NusB
D RAK1035_2627 Transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D RAK1035_1100 Serine phosphatase RsbU, regulator of sigma subunit K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D RAK1035_1985 Anti-sigma F factor antagonist (spoIIAA-2) K04749 rsbV; anti-sigma B factor antagonist
D RAK1035_1984 Serine-protein kinase RsbW K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D RAK1035_3244 C4-type zinc finger protein, DksA/TraR family K06204 dksA; RNA polymerase-binding transcription factor
D RAK1035_1323 Transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D RAK1035_1120 Transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:rok03019]
D RAK1035_2910 Ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D RAK1035_1848 Ribonuclease, Rne/Rng family K08301 rng; ribonuclease G [EC:3.1.26.-]
D RAK1035_0280 Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D RAK1035_3344 Metallo-beta-lactamase family protein, RNA-specific K12574 rnj; ribonuclease J [EC:3.1.-.-]
D RAK1035_0572 3'-to-5' exoribonuclease RNase R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D RAK1035_3533 ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D RAK1035_2615 Helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D RAK1035_1344 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D RAK1035_3647 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RAK1035_1179 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D RAK1035_1120 Transcription termination factor Rho K03628 rho; transcription termination factor Rho
D RAK1035_1313 Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D RAK1035_1731 Heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RAK1035_3340 RNA-binding protein Hfq K03666 hfq; host factor-I protein
D RAK1035_0002 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D RAK1035_2817 Polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D RAK1035_3416 Polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D RAK1035_1096 tRNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D RAK1035_1869 Adenosine (5')-pentaphospho-(5'')-adenosine pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D RAK1035_2129 ATP-binding protein ManX K06958 rapZ; RNase adapter protein RapZ
D RAK1035_0682 ATP-dependent helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:rok03011]
D RAK1035_0720 SSU ribosomal protein S1p K02945 RP-S1; small subunit ribosomal protein S1
D RAK1035_3002 SSU ribosomal protein S2p (SAe) K02967 RP-S2; small subunit ribosomal protein S2
D RAK1035_1928 SSU ribosomal protein S3p (S3e) K02982 RP-S3; small subunit ribosomal protein S3
D RAK1035_0202 SSU ribosomal protein S4p (S9e) K02986 RP-S4; small subunit ribosomal protein S4
D RAK1035_1941 SSU ribosomal protein S5p (S2e) K02988 RP-S5; small subunit ribosomal protein S5
D RAK1035_3445 SSU ribosomal protein S6p K02990 RP-S6; small subunit ribosomal protein S6
D RAK1035_1917 SSU ribosomal protein S7p (S5e) K02992 RP-S7; small subunit ribosomal protein S7
D RAK1035_1938 SSU ribosomal protein S8p (S15Ae) K02994 RP-S8; small subunit ribosomal protein S8
D RAK1035_2814 SSU ribosomal protein S9p (S16e) K02996 RP-S9; small subunit ribosomal protein S9
D RAK1035_1920 SSU ribosomal protein S10p (S20e) K02946 RP-S10; small subunit ribosomal protein S10
D RAK1035_1220 SSU ribosomal protein S11p (S14e) K02948 RP-S11; small subunit ribosomal protein S11
D RAK1035_1916 SSU ribosomal protein S12p (S23e) K02950 RP-S12; small subunit ribosomal protein S12
D RAK1035_1219 SSU ribosomal protein S13p (S18e) K02952 RP-S13; small subunit ribosomal protein S13
D RAK1035_1937 SSU ribosomal protein S14p (S29e), zinc-independent K02954 RP-S14; small subunit ribosomal protein S14
D RAK1035_1180 SSU ribosomal protein S15p (S13e) K02956 RP-S15; small subunit ribosomal protein S15
D RAK1035_0859 SSU ribosomal protein S16p K02959 RP-S16; small subunit ribosomal protein S16
D RAK1035_1933 SSU ribosomal protein S17p (S11e) K02961 RP-S17; small subunit ribosomal protein S17
D RAK1035_3446 SSU ribosomal protein S18p, zinc-independent K02963 RP-S18; small subunit ribosomal protein S18
D RAK1035_1926 SSU ribosomal protein S19p (S15e) K02965 RP-S19; small subunit ribosomal protein S19
D RAK1035_1291 SSU ribosomal protein S20p K02968 RP-S20; small subunit ribosomal protein S20
D RAK1035_0781 SSU ribosomal protein S21p K02970 RP-S21; small subunit ribosomal protein S21
D RAK1035_2629 LSU ribosomal protein L1p (L10Ae) K02863 RP-L1; large subunit ribosomal protein L1
D RAK1035_1925 LSU ribosomal protein L2p (L8e) K02886 RP-L2; large subunit ribosomal protein L2
D RAK1035_1921 LSU ribosomal protein L3p (L3e) K02906 RP-L3; large subunit ribosomal protein L3
D RAK1035_1922 LSU ribosomal protein L4p (L1e) K02926 RP-L4; large subunit ribosomal protein L4
D RAK1035_1936 LSU ribosomal protein L5p (L11e) K02931 RP-L5; large subunit ribosomal protein L5
D RAK1035_1939 LSU ribosomal protein L6p (L9e) K02933 RP-L6; large subunit ribosomal protein L6
D RAK1035_3447 LSU ribosomal protein L9p K02939 RP-L9; large subunit ribosomal protein L9
D RAK1035_2630 LSU ribosomal protein L10p (P0) K02864 RP-L10; large subunit ribosomal protein L10
D RAK1035_2628 LSU ribosomal protein L11p (L12e) K02867 RP-L11; large subunit ribosomal protein L11
D RAK1035_2631 LSU ribosomal protein L7/L12 (P1/P2) K02935 RP-L7; large subunit ribosomal protein L7/L12
D RAK1035_2813 LSU ribosomal protein L13p (L13Ae) K02871 RP-L13; large subunit ribosomal protein L13
D RAK1035_1934 LSU ribosomal protein L14p (L23e) K02874 RP-L14; large subunit ribosomal protein L14
D RAK1035_1215 LSU ribosomal protein L15p (L27Ae) K02876 RP-L15; large subunit ribosomal protein L15
D RAK1035_1929 LSU ribosomal protein L16p (L10e) K02878 RP-L16; large subunit ribosomal protein L16
D RAK1035_1222 LSU ribosomal protein L17p K02879 RP-L17; large subunit ribosomal protein L17
D RAK1035_1940 LSU ribosomal protein L18p (L5e) K02881 RP-L18; large subunit ribosomal protein L18
D RAK1035_0863 LSU ribosomal protein L19p K02884 RP-L19; large subunit ribosomal protein L19
D RAK1035_0705 LSU ribosomal protein L20p K02887 RP-L20; large subunit ribosomal protein L20
D RAK1035_3215 LSU ribosomal protein L21p K02888 RP-L21; large subunit ribosomal protein L21
D RAK1035_1927 LSU ribosomal protein L22p (L17e) K02890 RP-L22; large subunit ribosomal protein L22
D RAK1035_1923 LSU ribosomal protein L23p (L23Ae) K02892 RP-L23; large subunit ribosomal protein L23
D RAK1035_1935 LSU ribosomal protein L24p (L26e) K02895 RP-L24; large subunit ribosomal protein L24
D RAK1035_3214 LSU ribosomal protein L27p K02899 RP-L27; large subunit ribosomal protein L27
D RAK1035_3727 LSU ribosomal protein L28p, zinc-independent K02902 RP-L28; large subunit ribosomal protein L28
D RAK1035_1932 LSU ribosomal protein L29p (L35e) K02904 RP-L29; large subunit ribosomal protein L29
D RAK1035_1942 LSU ribosomal protein L30p (L7e) K02907 RP-L30; large subunit ribosomal protein L30
D RAK1035_0864 LSU ribosomal protein L31p, zinc-independent K02909 RP-L31; large subunit ribosomal protein L31
D RAK1035_3133 LSU ribosomal protein L32p K02911 RP-L32; large subunit ribosomal protein L32
D RAK1035_2477 LSU ribosomal protein L33p, zinc-independent K02913 RP-L33; large subunit ribosomal protein L33
D RAK1035_3118 LSU ribosomal protein L34p K02914 RP-L34; large subunit ribosomal protein L34
D RAK1035_0706 LSU ribosomal protein L35p K02916 RP-L35; large subunit ribosomal protein L35
D RAK1035_3566 LSU ribosomal protein L36p K02919 RP-L36; large subunit ribosomal protein L36
D RAK1035_3423 LSU ribosomal protein L25p K02897 RP-L25; large subunit ribosomal protein L25
D RAK1035_3936 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D RAK1035_3942 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D RAK1035_3932 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RAK1035_3938 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RAK1035_3935 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RAK1035_3941 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:rok03009]
D RAK1035_0280 Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D RAK1035_0278 GTP-binding protein Era K03595 era; GTPase
D RAK1035_3212 GTP-binding protein Obg K03979 obgE; GTPase [EC:3.6.5.-]
D RAK1035_3244 C4-type zinc finger protein, DksA/TraR family K06204 dksA; RNA polymerase-binding transcription factor
D RAK1035_1302 Transcription termination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D RAK1035_0113 Transcription termination protein NusB K03625 nusB; transcription antitermination protein NusB
D RAK1035_2627 Transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D RAK1035_2329 SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D RAK1035_1902 16S rRNA m(5)C 967 methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D RAK1035_3114 Sun protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D RAK1035_0579 Ribosomal RNA small subunit methyltransferase C K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D RAK1035_1874 16S rRNA (guanine(966)-N(2))-methyltransferase SSU rRNA m(2)G966 K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D RAK1035_3733 Ribosomal RNA small subunit methyltransferase E K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D RAK1035_1117 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D RAK1035_2481 rRNA small subunit methyltransferase H K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D RAK1035_0231 rRNA small subunit methyltransferase I K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D RAK1035_2315 23S rRNA (guanosine-2'-O-) -methyltransferase rlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D RAK1035_2859 Heat shock protein FtsJ/RrmJ, Ribosomal RNA large subunit methyltransferase E K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D RAK1035_1238 LSU m3Psi1915 methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D RAK1035_3254 LSU m5C1962 methyltransferase RlmI K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D RAK1035_2244 Protein involved in catabolism of external DNA K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266]
D RAK1035_0785 Ribosomal RNA large subunit methyltransferase N K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D RAK1035_1095 23S rRNA (Uracil-5-) -methyltransferase RumA K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D RAK1035_1959 Ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D RAK1035_0339 Ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D RAK1035_1751 Ribosomal large subunit pseudouridine synthase C K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D RAK1035_0084 Ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D RAK1035_2681 Ribosomal large subunit pseudouridine synthase E K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
D RAK1035_1328 Ribosomal-protein-S18p-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D RAK1035_1987 Hypothetical protein K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D RAK1035_0303 Ribosomal-protein-S5p-alanine acetyltransferase K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267]
D RAK1035_3227 Hypothetical protein K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
D RAK1035_0861 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D RAK1035_0702 Ribosomal protein S12p Asp88 methylthiotransferase K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D RAK1035_2697 Ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D RAK1035_2910 Ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D RAK1035_1848 Ribonuclease, Rne/Rng family K08301 rng; ribonuclease G [EC:3.1.26.-]
D RAK1035_0021 Putative Holliday junction resolvase YqgF K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D RAK1035_2615 Helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D RAK1035_2946 putative GTPase related to EngC K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D RAK1035_3676 GTP-binding protein EngA K03977 engA; GTPase
D RAK1035_3339 GTP-binding protein HflX K03665 hflX; GTPase
D RAK1035_3712 TsaC protein (YrdC-Sua5 domains) K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D RAK1035_0286 GTP pyrophosphokinase, (p)ppGpp synthetase II K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D RAK1035_1905 Ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D RAK1035_1301 Hypothetical protein K09748 rimP; ribosome maturation factor RimP
D RAK1035_1239 Ribosomal silencing factor RsfA (former Iojap) K09710 ybeB; ribosome-associated protein
D RAK1035_3798 Metal-dependent hydrolase YbeY, involved in rRNA and/or ribosome maturation and assembly K07042 ybeY; probable rRNA maturation factor
D RAK1035_0920 Ribosomal subunit interface protein K05808 hpf; ribosome hibernation promoting factor
D RAK1035_2799 GTP-binding and nucleic acid-binding protein YchF K06942 ychF; ribosome-binding ATPase
C 03016 Transfer RNA biogenesis [BR:rok03016]
D RAK1035_1743 Ribonuclease T2 family protein K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D RAK1035_2521 Glutamyl-tRNA(Gln) synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RAK1035_3375 Glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RAK1035_2255 Prolyl-tRNA synthetase, bacterial type K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D RAK1035_3426 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D RAK1035_2015 Leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RAK1035_0337 Methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D RAK1035_3152 Arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RAK1035_0351 Aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RAK1035_3110 Alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D RAK1035_0349 Threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D RAK1035_3672 Seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D RAK1035_3357 Cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D RAK1035_0040 Valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D RAK1035_0635 Histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D RAK1035_1297 Phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D RAK1035_1284 Phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D RAK1035_3185 Tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RAK1035_1868 Tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D RAK1035_2487 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D RAK1035_2929 Ser-tRNA(Ala) deacylase K07050 AARSD1; misacylated tRNA(Ala) deacylase [EC:3.1.1.-]
D RAK1035_1294 Bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D RAK1035_3794 tRNA (guanine46-N7-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D RAK1035_2792 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D RAK1035_1907 tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D RAK1035_3045 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RAK1035_3712 TsaC protein (YrdC-Sua5 domains) K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D RAK1035_3840 tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D RAK1035_1119 GTPase and tRNA-U34 5-formylation enzyme TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D RAK1035_1118 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D RAK1035_2865 NADH dehydrogenase-like protein K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D RAK1035_0996 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D RAK1035_3117 Ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D RAK1035_1112 Ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D RAK1035_0916 Ribonuclease D related protein K03684 rnd; ribonuclease D [EC:3.1.13.5]
D RAK1035_2896 Ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5]
D RAK1035_2509 ABC transporter, ATP-binding protein K06020 ettA; energy-dependent translational throttle protein EttA
D RAK1035_1490 Lysyl-tRNA synthetase (class I) K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D RAK1035_2471 Glycyl-tRNA synthetase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D RAK1035_2473 Glycyl-tRNA synthetase beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D RAK1035_2809 Glutamyl-Q-tRNA synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D RAK1035_0340 tRNA-specific adenosine-34 deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D RAK1035_2225 tRNA dihydrouridine synthase A K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
D RAK1035_3031 tRNA dihydrouridine synthase B K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D RAK1035_3802 tRNA-i(6)A37 methylthiotransferase K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D RAK1035_1977 tRNA-t(6)A37 methylthiotransferase K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
D RAK1035_3556 tRNA:Cm32/Um32 methyltransferase K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-]
D RAK1035_2810 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D RAK1035_0862 tRNA (Guanine37-N1) -methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D RAK1035_1959 Ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D RAK1035_2800 tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D RAK1035_1359 tRNA(Cytosine32)-2-thiocytidine synthetase K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D RAK1035_2911 tRNA 5-methylaminomethyl-2-thiouridine synthase TusA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D RAK1035_3229 Iron binding protein SufA for iron-sulfur cluster assembly K13628 iscA; iron-sulfur cluster assembly protein
D RAK1035_2558 Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress K06980 ygfZ; tRNA-modifying protein YgfZ
D RAK1035_3783 S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D RAK1035_2566 Queuosine Biosynthesis QueC ATPase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D RAK1035_2567 6-carboxytetrahydropterin synthase, Queuosine biosynthesis QueD, PTPS-I K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D RAK1035_2568 Queuosine Biosynthesis QueE Radical SAM K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D RAK1035_2569 NADPH dependent preQ0 reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D RAK1035_1020 Iron-sulfur cluster-binding protein K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D RAK1035_2866 Selenophosphate-dependent tRNA 2-selenouridine synthase K06917 selU; tRNA 2-selenouridine synthase [EC:2.9.1.3]
D RAK1035_3224 tRNA-guanine transglycosylase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D RAK1035_1206 tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D RAK1035_1327 TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D RAK1035_1076 TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D RAK1035_0900 TsaE protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D RAK1035_0572 3'-to-5' exoribonuclease RNase R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D RAK1035_1179 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:rok03012]
D RAK1035_1304 Translation initiation factor 2 K02519 infB; translation initiation factor IF-2
D RAK1035_3240 Translation initiation factor 3 K02520 infC; translation initiation factor IF-3
D RAK1035_2335 ABC transporter ATP-binding protein uup K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D RAK1035_3001 Translation elongation factor Ts K02357 tsf; elongation factor Ts
D RAK1035_1919 Translation elongation factor Tu K02358 tuf; elongation factor Tu
D RAK1035_2620 Translation elongation factor Tu K02358 tuf; elongation factor Tu
D RAK1035_1918 Translation elongation factor G K02355 fusA; elongation factor G
D RAK1035_3559 Peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D RAK1035_3838 Ribosome recycling factor K02838 frr; ribosome recycling factor
D RAK1035_3558 Protein-N(5)-glutamine methyltransferase PrmC K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D RAK1035_3424 Peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D RAK1035_1851 Translation initiation factor 1 K02518 infA; translation initiation factor IF-1
D RAK1035_2788 Translation elongation factor P K02356 efp; elongation factor P
D RAK1035_3167 Peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D RAK1035_3480 Peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
D RAK1035_0802 Hypothetical protein K15034 yaeJ; ribosome-associated protein
C 03110 Chaperones and folding catalysts [BR:rok03110]
D RAK1035_0176 ATP-dependent Clp protease ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D RAK1035_0957 ClpB protein K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D RAK1035_0485 ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D RAK1035_0892 ATP-dependent hsl protease ATP-binding subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D RAK1035_1313 Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D RAK1035_1731 Heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RAK1035_1312 Chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D RAK1035_0006 DnaJ-like protein DjlA K05801 djlA; DnaJ like chaperone protein
D RAK1035_1098 Chaperonin, 33 kDa K04083 hslO; molecular chaperone Hsp33
D RAK1035_1110 Heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE
D RAK1035_1401 16 kDa heat shock protein A K04080 ibpA; molecular chaperone IbpA
D RAK1035_0073 Ribosome-associated heat shock protein (S4-like protein) K04762 hslR; ribosome-associated heat shock protein Hsp15
D RAK1035_1732 Heat shock protein 60 family co-chaperone GroES K04078 groES; chaperonin GroES
D RAK1035_0241 HtrA protease/chaperone protein K04771 degP; serine protease Do [EC:3.4.21.107]
D RAK1035_2745 HtrA protease/chaperone protein K04771 degP; serine protease Do [EC:3.4.21.107]
D RAK1035_1207 Cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D RAK1035_3292 Cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D RAK1035_0849 ATP synthase F0 sector subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D RAK1035_1126 Export cytoplasm chaperone protein, SecB K03071 secB; preprotein translocase subunit SecB
D RAK1035_2693 Copper metallochaperone, Cox17-like protein K09796 pccA; periplasmic copper chaperone A
D RAK1035_3729 Copper metallochaperone, Cox17-like protein K09796 pccA; periplasmic copper chaperone A
D RAK1035_4036 DUF461 precursor K09796 pccA; periplasmic copper chaperone A
D RAK1035_3632 NiFe hydrogenase nickel incorporation protein HypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF
D RAK1035_3631 NiFe hydrogenase nickel incorporation-associated protein HypB K04652 hypB; hydrogenase nickel incorporation protein HypB
D RAK1035_2684 Peptidyl-prolyl cis-trans isomerase PpiD K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D RAK1035_1307 Peptidyl-prolyl cis-trans isomerase PpiC K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D RAK1035_2327 Survival protein SurA precursor (Peptidyl-prolyl cis-trans isomerase SurA) K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D RAK1035_0895 Thioredoxin K03671 TXN; thioredoxin
D RAK1035_3476 Thioredoxin domain-containing K05838 ybbN; putative thioredoxin
D RAK1035_1085 Glutaredoxin 3 (Grx2) K03676 grxC; glutaredoxin 3
D RAK1035_3517 putative monothiol glutaredoxin ycf64-like K07390 grxD; monothiol glutaredoxin
D RAK1035_3663 Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
C 04131 Membrane trafficking [BR:rok04131]
D RAK1035_2336 Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D RAK1035_3539 Fructose-bisphosphate aldolase class I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D RAK1035_2424 NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RAK1035_2427 NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RAK1035_2648 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RAK1035_0708 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RAK1035_1347 Arginine/ornithine antiporter ArcD K06902 UMF1; MFS transporter, UMF1 family
C 04121 Ubiquitin system
C 03051 Proteasome
C 03032 DNA replication proteins [BR:rok03032]
D RAK1035_2073 Ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D RAK1035_1817 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RAK1035_3649 Modification methylase HhaI K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RAK1035_0778 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D RAK1035_3136 Integration host factor alpha subunit K04764 ihfA; integration host factor subunit alpha
D RAK1035_3528 Integration host factor beta subunit K05788 ihfB; integration host factor subunit beta
D RAK1035_1290 Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D RAK1035_2793 Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D RAK1035_3810 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D RAK1035_3975 Plasmid replication protein RepC K18996 repC; replication initiation protein RepC
D RAK1035_3105 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RAK1035_0637 DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RAK1035_1289 DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RAK1035_2322 DNA polymerase III chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D RAK1035_2017 DNA polymerase II K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RAK1035_2308 DNA polymerase III delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RAK1035_0525 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RAK1035_1125 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RAK1035_1833 Polymerase epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RAK1035_1748 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RAK1035_1277 Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D RAK1035_1013 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RAK1035_2803 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D RAK1035_3547 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D RAK1035_1031 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D RAK1035_2141 Topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D RAK1035_1436 Topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D RAK1035_0316 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:rok03036]
D RAK1035_1817 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RAK1035_3649 Modification methylase HhaI K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RAK1035_0500 Hypothetical protein K20798 HENMT1; small RNA 2'-O-methyltransferase [EC:2.1.1.386]
D RAK1035_0280 Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D RAK1035_3539 Fructose-bisphosphate aldolase class I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D RAK1035_3987 Hypothetical protein K26273 SBNO; protein strawberry notch
D RAK1035_0778 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D RAK1035_3136 Integration host factor alpha subunit K04764 ihfA; integration host factor subunit alpha
D RAK1035_3528 Integration host factor beta subunit K05788 ihfB; integration host factor subunit beta
D RAK1035_1290 Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D RAK1035_1982 Hypothetical protein K11940 hspQ; heat shock protein HspQ
D RAK1035_3340 RNA-binding protein Hfq K03666 hfq; host factor-I protein
D RAK1035_2226 Transcriptional regulator, LysR family K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D RAK1035_0951 Transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D RAK1035_1024 Transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D RAK1035_2148 PutR, transcriptional activator of PutA and PutP K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D RAK1035_3870 Transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D RAK1035_0881 Chromosome partition protein smc K03529 smc; chromosome segregation protein
D RAK1035_3149 Segregation and condensation protein A K05896 scpA; segregation and condensation protein A
D RAK1035_3148 Segregation and condensation protein B K06024 scpB; segregation and condensation protein B
D RAK1035_3892 Cell division protein FtsA K03590 ftsA; cell division protein FtsA
D RAK1035_0662 Cell division transporter, ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D RAK1035_2483 Cell division protein FtsI, Peptidoglycan synthetase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D RAK1035_1979 Cell division protein FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D RAK1035_2482 Cell division protein FtsL K03586 ftsL; cell division protein FtsL
D RAK1035_3893 Cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ
D RAK1035_3899 Cell division protein FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D RAK1035_0663 Cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D RAK1035_3891 Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D RAK1035_3561 Hypothetical protein K09888 zapA; cell division protein ZapA
D RAK1035_1080 ATPase, AFG1 family K06916 zapE; cell division protein ZapE
D RAK1035_3169 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D RAK1035_0593 RND efflux system, membrane fusion protein CmeA K03585 acrA; membrane fusion protein, multidrug efflux system
D RAK1035_2848 HlyD family secretion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D RAK1035_0420 Rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D RAK1035_0421 Rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D RAK1035_0422 Rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D RAK1035_0424 Rod shape-determining protein RodA K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D RAK1035_1116 Chromosome (plasmid) partitioning protein ParA K03496 parA; chromosome partitioning protein
D RAK1035_1334 ATPase involved in chromosome partitioning K03496 parA; chromosome partitioning protein
D RAK1035_3973 Plasmid replication protein RepA K03496 parA; chromosome partitioning protein
D RAK1035_1115 Chromosome (plasmid) partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RAK1035_2400 ParB-like nuclease domain protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RAK1035_3980 Putative plasmid stabilization protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RAK1035_2141 Topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D RAK1035_1436 Topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D RAK1035_1118 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D RAK1035_1117 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D RAK1035_2810 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D RAK1035_0551 Tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D RAK1035_3190 Tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D RAK1035_2027 Scaffold protein for, 4Fe-4S cluster assembly ApbC, MRP-like K03593 mrp; ATP-binding protein involved in chromosome partitioning
D RAK1035_3830 Scaffold protein for, 4Fe-4S cluster assembly ApbC, MRP-like K03593 mrp; ATP-binding protein involved in chromosome partitioning
D RAK1035_1355 GTP-binding protein EngB K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:rok03400]
D RAK1035_0130 Deoxyribodipyrimidine photolyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D RAK1035_2923 Deoxyribodipyrimidine photolyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D RAK1035_1885 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D RAK1035_1494 Endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D RAK1035_1099 NTP pyrophosphohydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D RAK1035_1305 5-methyl-dCTP pyrophosphohydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D RAK1035_1727 Dihydroneopterin triphosphate pyrophosphohydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D RAK1035_0188 Deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D RAK1035_1493 ADA regulatory protein K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D RAK1035_2445 Deoxyribodipyrimidine photolyase-related protein K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13]
D RAK1035_1314 Alkylated DNA repair protein AlkB K03919 alkB; DNA oxidative demethylase [EC:1.14.11.33]
D RAK1035_0437 Uracil-DNA glycosylase, family 4 K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D RAK1035_3684 DNA-3-methyladenine glycosylase II K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D RAK1035_0813 DNA-3-methyladenine glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D RAK1035_1497 Formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D RAK1035_3156 Exodeoxyribonuclease III K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2]
D RAK1035_3477 Exodeoxyribonuclease III K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2]
D RAK1035_3827 Single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D RAK1035_2803 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D RAK1035_1013 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RAK1035_3160 Excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D RAK1035_0536 Excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D RAK1035_1419 Excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D RAK1035_3693 ATP-dependent DNA helicase UvrD/PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RAK1035_2633 DNA-directed RNA polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D RAK1035_2634 DNA-directed RNA polymerase beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D RAK1035_1221 DNA-directed RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D RAK1035_0287 DNA-directed RNA polymerase omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D RAK1035_3540 Transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D RAK1035_1109 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D RAK1035_0295 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D RAK1035_3851 Exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D RAK1035_2978 Exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D RAK1035_0637 DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RAK1035_1289 DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RAK1035_2322 DNA polymerase III chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D RAK1035_2017 DNA polymerase II K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RAK1035_2308 DNA polymerase III delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RAK1035_0525 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RAK1035_1125 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RAK1035_1833 Polymerase epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RAK1035_1748 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RAK1035_3105 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RAK1035_3111 RecA protein K03553 recA; recombination protein RecA
D RAK1035_2701 Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D RAK1035_2702 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D RAK1035_2700 Crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D RAK1035_2695 Helicase PriA essential for oriC/DnaA-independent DNA replication K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D RAK1035_3596 Chromosome partition protein smc K03546 sbcC; DNA repair protein SbcC/Rad50
D RAK1035_3014 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D RAK1035_1288 DNA recombination and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D RAK1035_2804 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D RAK1035_0276 DNA recombination and repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D RAK1035_1746 Recombination protein RecR K06187 recR; recombination protein RecR
D RAK1035_2350 DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D RAK1035_0896 ATP-dependent nuclease subunit A K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
D RAK1035_0897 ATP-dependent nuclease subunit B K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
D RAK1035_2838 ATPase component BioM of energizing module of biotin ECF transporter K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
D RAK1035_3547 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D RAK1035_1031 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D RAK1035_0316 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D RAK1035_0778 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D RAK1035_3136 Integration host factor alpha subunit K04764 ihfA; integration host factor subunit alpha
D RAK1035_3528 Integration host factor beta subunit K05788 ihfB; integration host factor subunit beta
D RAK1035_1344 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D RAK1035_3564 DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D RAK1035_3373 SOS-response repressor and protease LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D RAK1035_0333 Hypothetical protein K14160 imuA; protein ImuA
D RAK1035_0837 DNA polymerase IV K14161 imuB; protein ImuB
D RAK1035_1871 DNA polymerase III alpha subunit K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
D RAK1035_0475 ATP-dependent helicase, DEAD/DEAH box family, associated with Flp pilus assembly K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
D RAK1035_0630 Ribonucleotide reductase of class II (coenzyme B12-dependent) K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D RAK1035_2692 Ribonucleotide reductase of class II (coenzyme B12-dependent) K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:rok03029]
D RAK1035_1880 Ubiquinol--cytochrome c reductase, cytochrome B subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D RAK1035_1304 Translation initiation factor 2 K02519 infB; translation initiation factor IF-2
D RAK1035_3240 Translation initiation factor 3 K02520 infC; translation initiation factor IF-3
D RAK1035_3001 Translation elongation factor Ts K02357 tsf; elongation factor Ts
D RAK1035_1919 Translation elongation factor Tu K02358 tuf; elongation factor Tu
D RAK1035_2620 Translation elongation factor Tu K02358 tuf; elongation factor Tu
D RAK1035_1918 Translation elongation factor G K02355 fusA; elongation factor G
D RAK1035_0074 ATP-dependent DNA helicase K17675 SUPV3L1; ATP-dependent RNA helicase SUPV3L1/SUV3 [EC:5.6.2.6]
D RAK1035_0278 GTP-binding protein Era K03595 era; GTPase
D RAK1035_3185 Tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RAK1035_2015 Leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RAK1035_0351 Aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RAK1035_3152 Arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RAK1035_1876 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D RAK1035_2240 Aspartyl-tRNA(Asn) amidotransferase subunit A, Glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D RAK1035_2430 Aspartyl-tRNA(Asn) amidotransferase subunit B, Glutamyl-tRNA(Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D RAK1035_2239 Aspartyl-tRNA(Asn) amidotransferase subunit C, Glutamyl-tRNA(Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D RAK1035_3105 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RAK1035_3060 Outer membrane protein assembly factor YaeT precursor K07277 SAM50; outer membrane protein insertion porin family
D RAK1035_1313 Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D RAK1035_1110 Heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE
D RAK1035_1731 Heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RAK1035_1732 Heat shock protein 60 family co-chaperone GroES K04078 groES; chaperonin GroES
D RAK1035_1312 Chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D RAK1035_3045 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RAK1035_3517 putative monothiol glutaredoxin ycf64-like K07390 grxD; monothiol glutaredoxin
D RAK1035_2027 Scaffold protein for, 4Fe-4S cluster assembly ApbC, MRP-like K03593 mrp; ATP-binding protein involved in chromosome partitioning
D RAK1035_3830 Scaffold protein for, 4Fe-4S cluster assembly ApbC, MRP-like K03593 mrp; ATP-binding protein involved in chromosome partitioning
D RAK1035_0310 Cytochrome c oxidase polypeptide I K02257 COX10; heme o synthase [EC:2.5.1.141]
D RAK1035_0308 Cytochrome oxidase biogenesis protein Cox11-CtaG, copper delivery to Cox1 K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D RAK1035_3555 Heme A synthase, cytochrome oxidase biogenesis protein Cox15-CtaA K02259 COX15; heme a synthase [EC:1.17.99.9]
D RAK1035_1357 Inner membrane protein translocase component YidC, long form K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RAK1035_0306 Cytochrome oxidase biogenesis protein Surf1, facilitates heme A insertion K14998 SURF1; surfeit locus 1 family protein
D RAK1035_0903 Cytochrome oxidase biogenesis protein Sco1/SenC/PrrC, putative copper metallochaperone K07152 SCO1; protein SCO1
D RAK1035_1070 Cytochrome oxidase biogenesis protein Sco1/SenC/PrrC, putative copper metallochaperone K07152 SCO1; protein SCO1
D RAK1035_1373 SCO1/SenC family protein K07152 SCO1; protein SCO1
D RAK1035_4033 Hypothetical protein K07152 SCO1; protein SCO1
D RAK1035_4037 Cytochrome oxidase biogenesis protein Sco1/SenC/PrrC, putative copper metallochaperone K07152 SCO1; protein SCO1
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:rok02000]
D RAK1035_0011 Lipid A export ATP-binding/permease protein MsbA K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
D RAK1035_2621 Lipid A export ATP-binding/permease protein MsbA K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D RAK1035_2318 ABC transporter, ATP binding/permease protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D RAK1035_3790 putative ATP-binding/permease fusion ABC transporter K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D RAK1035_0301 Type I secretion system ATPase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D RAK1035_1809 ABC transporter HlyB/MsbA family K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D RAK1035_3129 ABC transporter, ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein
D RAK1035_0455 Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA K02020 modA; molybdate transport system substrate-binding protein
D RAK1035_0454 Molybdenum transport system permease protein ModB K02018 modB; molybdate transport system permease protein
D RAK1035_0453 Molybdenum transport ATP-binding protein ModC K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D RAK1035_0978 ABC-type tungstate transport system, periplasmic binding protein K05772 tupA; tungstate transport system substrate-binding protein
D RAK1035_0980 ABC-type tungstate transport system, permease protein K05773 tupB; tungstate transport system permease protein
D RAK1035_0979 ABC-type tungstate transport system, ATP-binding protein K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6]
D RAK1035_0623 Nitrate ABC transporter, nitrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D RAK1035_1619 Cyanate ABC transporter, substrate binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D RAK1035_0622 Cyanate ABC transporter, permease protein K15577 nrtB; nitrate/nitrite transport system permease protein
D RAK1035_1620 Cyanate ABC transporter, permease protein K15577 nrtB; nitrate/nitrite transport system permease protein
D RAK1035_0621 Nitrate ABC transporter, ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D RAK1035_1621 Cyanate ABC transporter, ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D RAK1035_0808 Taurine-binding periplasmic protein TauA K15551 tauA; taurine transport system substrate-binding protein
D RAK1035_0810 Taurine transport system permease protein TauC K15552 tauC; taurine transport system permease protein
D RAK1035_0809 Taurine transport ATP-binding protein TauB K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7]
D RAK1035_2437 Ferric iron ABC transporter, iron-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D RAK1035_0068 Ferric iron ABC transporter, permease protein K02011 afuB; iron(III) transport system permease protein
D RAK1035_3056 Ferric iron ABC transporter, ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D RAK1035_0493 ABC transporter, periplasmic spermidine putrescine-binding protein PotD K11069 potD; spermidine/putrescine transport system substrate-binding protein
D RAK1035_0591 ABC transporter, periplasmic spermidine putrescine-binding protein PotD K11069 potD; spermidine/putrescine transport system substrate-binding protein
D RAK1035_0613 ABC transporter, periplasmic spermidine putrescine-binding protein PotD K11069 potD; spermidine/putrescine transport system substrate-binding protein
D RAK1035_1260 ABC transporter, periplasmic spermidine putrescine-binding protein PotD K11069 potD; spermidine/putrescine transport system substrate-binding protein
D RAK1035_1633 ABC transporter, periplasmic spermidine putrescine-binding protein PotD K11069 potD; spermidine/putrescine transport system substrate-binding protein
D RAK1035_2457 ABC transporter,binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D RAK1035_0491 ABC transporter permease component K11070 potC; spermidine/putrescine transport system permease protein
D RAK1035_0588 Spermidine Putrescine ABC transporter permease component potC K11070 potC; spermidine/putrescine transport system permease protein
D RAK1035_0610 Spermidine Putrescine ABC transporter permease component potC K11070 potC; spermidine/putrescine transport system permease protein
D RAK1035_1261 Spermidine Putrescine ABC transporter permease component potC K11070 potC; spermidine/putrescine transport system permease protein
D RAK1035_1635 Spermidine Putrescine ABC transporter permease component potC K11070 potC; spermidine/putrescine transport system permease protein
D RAK1035_2459 Spermidine Putrescine ABC transporter permease component potC K11070 potC; spermidine/putrescine transport system permease protein
D RAK1035_0492 ABC transporter permease protein K11071 potB; spermidine/putrescine transport system permease protein
D RAK1035_0589 Spermidine Putrescine ABC transporter permease component PotB K11071 potB; spermidine/putrescine transport system permease protein
D RAK1035_0611 Spermidine Putrescine ABC transporter permease component PotB K11071 potB; spermidine/putrescine transport system permease protein
D RAK1035_1262 Spermidine Putrescine ABC transporter permease component PotB K11071 potB; spermidine/putrescine transport system permease protein
D RAK1035_1634 Spermidine Putrescine ABC transporter permease component PotB K11071 potB; spermidine/putrescine transport system permease protein
D RAK1035_2458 Spermidine Putrescine ABC transporter permease component PotB K11071 potB; spermidine/putrescine transport system permease protein
D RAK1035_0490 Maltose/maltodextrin transport ATP-binding protein MalK K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D RAK1035_0590 Putrescine transport ATP-binding protein PotA K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D RAK1035_0612 Putrescine transport ATP-binding protein PotA K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D RAK1035_1259 Putrescine transport ATP-binding protein PotA K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D RAK1035_1632 Putrescine transport ATP-binding protein PotA K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D RAK1035_2460 Putrescine transport ATP-binding protein PotA K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D RAK1035_1170 Putrescine ABC transporter putrescine-binding protein PotF K11073 potF; putrescine transport system substrate-binding protein
D RAK1035_1173 Putrescine transport system permease protein PotI K11074 potI; putrescine transport system permease protein
D RAK1035_1172 Putrescine transport system permease protein PotH K11075 potH; putrescine transport system permease protein
D RAK1035_1171 Putrescine transport ATP-binding protein PotG K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16]
D RAK1035_0967 Spermidine/putrescine-binding periplasmic protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D RAK1035_1600 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D RAK1035_1627 ABC transporter, binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D RAK1035_0965 Polyamine ABC transporter, permease protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D RAK1035_1598 Putrescine transport system permease protein potI K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D RAK1035_1624 ABC transporter permease protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D RAK1035_0966 Polyamine ABC transporter, permease protein K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D RAK1035_1599 ABC transporter permease protein K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D RAK1035_0968 Maltose/maltodextrin transport ATP-binding protein MalK K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D RAK1035_1601 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D RAK1035_1626 Putrescine transport ATP-binding protein PotA K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D RAK1035_1549 Glycine betaine/proline ABC transporter, periplasmic substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D RAK1035_1861 L-proline glycine betaine binding ABC transporter protein ProX K02002 proX; glycine betaine/proline transport system substrate-binding protein
D RAK1035_2232 L-proline glycine betaine binding ABC transporter protein ProX K02002 proX; glycine betaine/proline transport system substrate-binding protein
D RAK1035_1551 L-proline glycine betaine ABC transport system permease protein ProW K02001 proW; glycine betaine/proline transport system permease protein
D RAK1035_1863 L-proline glycine betaine ABC transport system permease protein ProW K02001 proW; glycine betaine/proline transport system permease protein
D RAK1035_2230 L-proline glycine betaine ABC transport system permease protein ProW K02001 proW; glycine betaine/proline transport system permease protein
D RAK1035_1550 L-proline glycine betaine ABC transport system permease protein ProV K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D RAK1035_1862 L-proline glycine betaine ABC transport system permease protein ProV K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D RAK1035_2229 L-proline glycine betaine ABC transport system permease protein ProV K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D RAK1035_1586 L-proline glycine betaine binding ABC transporter protein ProX K05845 opuC; osmoprotectant transport system substrate-binding protein
D RAK1035_1583 L-proline glycine betaine binding ABC transporter protein ProX K05846 opuBD; osmoprotectant transport system permease protein
D RAK1035_1584 Binding-protein-dependent transport systems inner membrane component K05846 opuBD; osmoprotectant transport system permease protein
D RAK1035_1582 L-proline glycine betaine ABC transport system permease protein ProV K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D RAK1035_1268 Hydroxymethylpyrimidine ABC transporter, substrate-binding component K15598 thiY; putative hydroxymethylpyrimidine transport system substrate-binding protein
D RAK1035_2717 Hydroxymethylpyrimidine ABC transporter, transmembrane component K15599 thiX; putative hydroxymethylpyrimidine transport system permease protein
D RAK1035_2719 Hydroxymethylpyrimidine ABC transporter, ATPase component K15600 thiZ; putative hydroxymethylpyrimidine transport system ATP-binding protein
D RAK1035_1673 Pyrimidine ABC transporter, substrate-binding component K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D RAK1035_1674 Pyrimidine ABC transporter, transmembrane component 1 K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D RAK1035_1675 Pyrimidine ABC transporter, transmembrane component 2 K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D RAK1035_1676 Pyrimidine ABC transporter, ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D RAK1035_1780 Dihydroxyacetone ABC transport system, ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D RAK1035_1781 Dihydroxyacetone ABC transport system, ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D RAK1035_0461 Glycerol-3-phosphate ABC transporter, permease protein UgpA K17321 glpV; glycerol transport system substrate-binding protein
D RAK1035_0464 Glycerol-3-phosphate ABC transporter, permease protein UgpA K17322 glpP; glycerol transport system permease protein
D RAK1035_0463 Glycerol-3-phosphate ABC transporter, permease protein UgpE K17323 glpQ; glycerol transport system permease protein
D RAK1035_0466 Glycerol-3-phosphate ABC transporter, ATP-binding protein UgpC K17324 glpS; glycerol transport system ATP-binding protein
D RAK1035_0465 Glycerol-3-phosphate ABC transporter, ATP-binding protein UgpC K17325 glpT; glycerol transport system ATP-binding protein
D RAK1035_0771 Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D RAK1035_0935 Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D RAK1035_0770 Glycerol-3-phosphate ABC transporter, permease protein UgpA K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D RAK1035_0934 Glycerol-3-phosphate ABC transporter, permease protein UgpA K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D RAK1035_0769 Glycerol-3-phosphate ABC transporter, permease protein UgpE K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D RAK1035_0933 Glycerol-3-phosphate ABC transporter, permease protein UgpE K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D RAK1035_0772 Glycerol-3-phosphate ABC transporter, ATP-binding protein UgpC K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D RAK1035_0932 Glycerol-3-phosphate ABC transporter, ATP-binding protein UgpC K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D RAK1035_0645 Nucleoside ABC transporter, periplasmic nucleoside-binding protein K07335 bmpA; basic membrane protein A and related proteins
D RAK1035_0989 Nucleoside ABC transporter, periplasmic nucleoside-binding protein K07335 bmpA; basic membrane protein A and related proteins
D RAK1035_0643 Nucleoside ABC transporter, permease protein 1 K23535 nupB; general nucleoside transport system permease protein
D RAK1035_0991 Nucleoside ABC transporter, permease protein 1 K23535 nupB; general nucleoside transport system permease protein
D RAK1035_0644 Nucleoside ABC transporter, permease protein 2 K23536 nupC; general nucleoside transport system permease protein
D RAK1035_0992 Nucleoside ABC transporter, permease protein 2 K23536 nupC; general nucleoside transport system permease protein
D RAK1035_0642 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D RAK1035_0990 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D RAK1035_0482 ABC-type transport system periplasmic component K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D RAK1035_3009 ABC-type transport system permease component K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D RAK1035_3010 Histidine ABC transporter, ATP-binding protein HisP K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D RAK1035_0299 ABC-type transport system auxiliary component K07323 mlaC; phospholipid transport system substrate-binding protein
D RAK1035_1776 Dihydroxyacetone ABC transport system, substrate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D RAK1035_1777 Dihydroxyacetone ABC transport system, permease protein 2 K02025 ABC.MS.P; multiple sugar transport system permease protein
D RAK1035_1778 Dihydroxyacetone ABC transport system, permease protein K02026 ABC.MS.P1; multiple sugar transport system permease protein
D RAK1035_1310 OmpA domain protein K02040 pstS; phosphate transport system substrate-binding protein
D RAK1035_2989 Phosphate ABC transporter, periplasmic phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D RAK1035_2990 Phosphate transport system permease protein PstC K02037 pstC; phosphate transport system permease protein
D RAK1035_2991 Phosphate transport system permease protein PstA K02038 pstA; phosphate transport system permease protein
D RAK1035_2992 Phosphate transport ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D RAK1035_0256 Phosphonate ABC transporter phosphate-binding periplasmic component K02044 phnD; phosphonate transport system substrate-binding protein
D RAK1035_0758 Phosphonate ABC transporter phosphate-binding periplasmic component K02044 phnD; phosphonate transport system substrate-binding protein
D RAK1035_4048 Phosphonate ABC transporter phosphate-binding periplasmic component K02044 phnD; phosphonate transport system substrate-binding protein
D RAK1035_0257 Phosphonate ABC transporter permease protein phnE2 K02042 phnE; phosphonate transport system permease protein
D RAK1035_0258 Phosphonate ABC transporter permease protein phnE1 K02042 phnE; phosphonate transport system permease protein
D RAK1035_0756 Phosphonate ABC transporter permease protein phnE1 K02042 phnE; phosphonate transport system permease protein
D RAK1035_4050 Phosphonate ABC transporter permease protein phnE K02042 phnE; phosphonate transport system permease protein
D RAK1035_0255 Phosphonate ABC transporter ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D RAK1035_0757 Phosphonate ABC transporter ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D RAK1035_4049 Phosphonate ABC transporter ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D RAK1035_1045 Glutamate Aspartate periplasmic binding protein precursor GltI K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D RAK1035_1047 Glutamate Aspartate transport system permease protein GltK K10002 gltK; glutamate/aspartate transport system permease protein
D RAK1035_1046 Glutamate Aspartate transport system permease protein GltJ K10003 gltJ; glutamate/aspartate transport system permease protein
D RAK1035_1048 Glutamate Aspartate transport ATP-binding protein GltL K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D RAK1035_1755 Glutamate Aspartate periplasmic binding protein precursor GltI K09969 aapJ; general L-amino acid transport system substrate-binding protein
D RAK1035_1756 Glutamate/glutamine/aspartate/asparagine transport system permease protein bztB K09970 aapQ; general L-amino acid transport system permease protein
D RAK1035_1757 Glutamate/glutamine/aspartate/asparagine transport system permease protein bztC K09971 aapM; general L-amino acid transport system permease protein
D RAK1035_1758 Glutamate/glutamine/aspartate/asparagine ABC transporter, ATP-binding protein K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1]
D RAK1035_2613 ABC transporter, substrate binding protein K23061 lhpP; hydroxyproline transporter system substrate-binding protein
D RAK1035_2612 Putative transport system permease protein K23062 lhpM; hydroxyproline transport system permease protein
D RAK1035_2611 putative permease of ABC transporter K23063 lhpN; hydroxyproline transport system permease protein
D RAK1035_2610 Glutamate transport ATP-binding protein K23064 lhpO; hydroxyproline transport system ATP-binding protein [EC:7.4.2.1]
D RAK1035_0108 Urea ABC transporter, urea binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RAK1035_0373 Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RAK1035_1056 Branched-chain amino acid ABC transporter, amino acid-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RAK1035_1385 High-affinity leucine-specific transport system, periplasmic binding protein LivK K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RAK1035_1648 Urea ABC transporter, urea binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RAK1035_2574 Benzoate transport, extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RAK1035_2759 Branched-chain amino acid ABC transporter, amino acid-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RAK1035_2868 ABC transporter, periplasmic protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RAK1035_2871 ABC transporter, periplasmic protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RAK1035_3289 ABC-type branched-chain amino acid transport systems, periplasmic component K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RAK1035_3506 Branched-chain amino acid ABC transporter, amino acid-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RAK1035_0376 Branched-chain amino acid ABC transporter, permease protein K01997 livH; branched-chain amino acid transport system permease protein
D RAK1035_1057 High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein
D RAK1035_1383 High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein
D RAK1035_2573 Benzoate transport, inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D RAK1035_2641 High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein
D RAK1035_2760 High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein
D RAK1035_2872 High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein
D RAK1035_3286 High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein
D RAK1035_0374 Branched-chain amino acid transport system permease protein LivM K01998 livM; branched-chain amino acid transport system permease protein
D RAK1035_1058 ABC transporter ATP-binding/permease protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RAK1035_1382 Branched-chain amino acid transport system permease protein LivM K01998 livM; branched-chain amino acid transport system permease protein
D RAK1035_2572 Benzoate transport, inner-membrane translocator precursor K01998 livM; branched-chain amino acid transport system permease protein
D RAK1035_2640 Branched-chain amino acid transport system permease protein LivM K01998 livM; branched-chain amino acid transport system permease protein
D RAK1035_2761 Branched-chain amino acid transport system permease protein LivM K01998 livM; branched-chain amino acid transport system permease protein
D RAK1035_2873 Branched-chain amino acid transport system permease protein LivM K01998 livM; branched-chain amino acid transport system permease protein
D RAK1035_3285 Branched-chain amino acid transport system permease protein LivM K01998 livM; branched-chain amino acid transport system permease protein
D RAK1035_0377 Branched-chain amino acid transport ATP-binding protein LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RAK1035_1381 Branched-chain amino acid transport ATP-binding protein LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RAK1035_2571 Benzoate transport, ATPase component K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RAK1035_2639 Urea ABC transporter, ATPase protein UrtD K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RAK1035_2762 Branched-chain amino acid transport ATP-binding protein LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RAK1035_2874 Branched-chain amino acid transport ATP-binding protein LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RAK1035_3288 Branched-chain amino acid transport ATP-binding protein LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RAK1035_0372 Branched-chain amino acid ABC transporter, ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RAK1035_1380 Branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RAK1035_2570 Benzoate transport, ATP binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RAK1035_2638 Branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RAK1035_2763 Branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RAK1035_2875 Branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RAK1035_3287 Branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RAK1035_0095 Urea ABC transporter, substrate binding protein UrtA K11959 urtA; urea transport system substrate-binding protein
D RAK1035_0608 Urea ABC transporter, urea binding protein K11959 urtA; urea transport system substrate-binding protein
D RAK1035_1641 Urea ABC transporter, urea binding protein K11959 urtA; urea transport system substrate-binding protein
D RAK1035_0094 Urea ABC transporter, permease protein UrtB K11960 urtB; urea transport system permease protein
D RAK1035_0607 Urea ABC transporter, permease protein UrtB K11960 urtB; urea transport system permease protein
D RAK1035_1642 Urea ABC transporter, permease protein UrtB K11960 urtB; urea transport system permease protein
D RAK1035_0093 Urea ABC transporter, permease protein UrtC K11961 urtC; urea transport system permease protein
D RAK1035_0606 Urea ABC transporter, permease protein UrtC K11961 urtC; urea transport system permease protein
D RAK1035_1643 Urea ABC transporter, permease protein UrtC K11961 urtC; urea transport system permease protein
D RAK1035_0092 Urea ABC transporter, ATPase protein UrtD K11962 urtD; urea transport system ATP-binding protein
D RAK1035_0605 Urea ABC transporter, ATPase protein UrtD K11962 urtD; urea transport system ATP-binding protein
D RAK1035_1644 Urea ABC transporter, ATPase protein UrtD K11962 urtD; urea transport system ATP-binding protein
D RAK1035_0091 Urea ABC transporter, ATPase protein UrtE K11963 urtE; urea transport system ATP-binding protein
D RAK1035_0604 Urea ABC transporter, ATPase protein UrtE K11963 urtE; urea transport system ATP-binding protein
D RAK1035_1645 Urea ABC transporter, ATPase protein UrtE K11963 urtE; urea transport system ATP-binding protein
D RAK1035_2172 Amino acid ABC transporter, periplasmic amino acid-binding portion K16961 yxeM; putative S-methylcysteine transport system substrate-binding protein
D RAK1035_2173 Amino acid ABC transporter, permease protein K16962 yxeN; putative S-methylcysteine transport system permease protein
D RAK1035_2174 ABC-type polar amino acid transport system, ATPase component K16963 yxeO; putative S-methylcysteine transport system ATP-binding protein
D RAK1035_0149 Nucleoside ABC transporter, permease protein 1 K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D RAK1035_2156 Polar amino acid uptake family ABC transporter, periplasmic substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D RAK1035_2704 LysM domain protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D RAK1035_2705 LysM domain protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D RAK1035_3197 His/Glu/Gln/Arg/opine family ABC transporter K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D RAK1035_0150 Histidine ABC transporter, permease protein HisQ K02029 ABC.PA.P; polar amino acid transport system permease protein
D RAK1035_0151 ABC transporter, permease protein K02029 ABC.PA.P; polar amino acid transport system permease protein
D RAK1035_2157 Hypothetical protein K02029 ABC.PA.P; polar amino acid transport system permease protein
D RAK1035_2158 Polar amino acid uptake family ABC transporter, permease protein K02029 ABC.PA.P; polar amino acid transport system permease protein
D RAK1035_3198 ABC transporter, permease protein, HisMQ family K02029 ABC.PA.P; polar amino acid transport system permease protein
D RAK1035_0148 Histidine ABC transporter, ATP-binding protein HisP K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D RAK1035_3196 Histidine ABC transporter, ATP-binding protein HisP K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D RAK1035_0753 Dipeptide-binding ABC transporter, periplasmic substrate-binding component K12368 dppA; dipeptide transport system substrate-binding protein
D RAK1035_0752 Dipeptide transport system permease protein DppB K12369 dppB; dipeptide transport system permease protein
D RAK1035_0751 Dipeptide transport system permease protein DppC K12370 dppC; dipeptide transport system permease protein
D RAK1035_0750 Dipeptide transport ATP-binding protein DppD K12371 dppD; dipeptide transport system ATP-binding protein
D RAK1035_0749 Dipeptide transport ATP-binding protein DppF K12372 dppF; dipeptide transport system ATP-binding protein
D RAK1035_1225 ABC transporter, substrate binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RAK1035_1739 Oligopeptide/dipeptide ABC transporter, periplasmic substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RAK1035_2233 ABC transporter, substrate binding protein, oligopeptide, KO:K02035 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RAK1035_2258 Peptide/opine/nickel uptake family ABC transporter, periplasmic substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RAK1035_2343 Hypothetical Protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RAK1035_3006 ABC transporter, periplasmic substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RAK1035_3103 Oligopeptide/dipeptide ABC transporter, periplasmic substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RAK1035_1027 Oligopeptide/dipeptide ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RAK1035_1226 Ribose ABC transport system, permease protein RbsC K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RAK1035_2259 Peptide/nickel/opine uptake family ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RAK1035_2637 putative ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RAK1035_1028 Dipeptide transport system permease protein DppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RAK1035_1227 Ribose ABC transport system, permease protein RbsC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RAK1035_2260 Oligopeptide transport system permease protein OppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RAK1035_2636 Oligopeptide transport system permease protein OppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RAK1035_1029 Oligopeptide/dipeptide ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RAK1035_1228 Oligopeptide transport system permease protein OppB K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RAK1035_2257 Dipeptide transport ATP-binding protein DppD K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RAK1035_2635 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RAK1035_1655 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA K13893 yejA; microcin C transport system substrate-binding protein
D RAK1035_1656 Oligopeptide transport system permease protein OppB K13894 yejB; microcin C transport system permease protein
D RAK1035_1657 Oligopeptide/dipeptide uptake family ABC transporter, permease protein K13895 yejE; microcin C transport system permease protein
D RAK1035_1658 Oligopeptide transport system permease protein OppB K13896 yejF; microcin C transport system ATP-binding protein
D RAK1035_1519 Periplasmic hemin-binding protein K25132 hmuT; heme transport system substrate-binding protein
D RAK1035_1518 Hemin ABC transporter, permease protein K25133 hmuU; heme transport system permease protein
D RAK1035_1517 ABC-type hemin transport system, ATPase component K10834 hmuV; heme transport system ATP-binding protein [EC:7.6.2.5]
D RAK1035_1610 ABC transporter, solute-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D RAK1035_1609 Vitamin B12 ABC transporter, permease component BtuC K02015 ABC.FEV.P; iron complex transport system permease protein
D RAK1035_1608 Vitamin B12 ABC transporter, ATPase component BtuD K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D RAK1035_2441 Zinc ABC transporter, periplasmic-binding protein ZnuA K09815 znuA; zinc transport system substrate-binding protein
D RAK1035_2438 Zinc ABC transporter, inner membrane permease protein ZnuB K09816 znuB; zinc transport system permease protein
D RAK1035_2439 Zinc ABC transporter, ATP-binding protein ZnuC K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D RAK1035_0562 Manganese ABC transporter, periplasmic-binding protein SitA K11707 troA; manganese/zinc/iron transport system substrate-binding protein
D RAK1035_0560 Manganese ABC transporter, inner membrane permease protein SitC K11708 troC; manganese/zinc/iron transport system permease protein
D RAK1035_0559 Manganese ABC transporter, inner membrane permease protein SitD K11709 troD; manganese/zinc/iron transport system permease protein
D RAK1035_0561 Manganese ABC transporter, ATP-binding protein SitB K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5]
D RAK1035_3019 Substrate-specific component BioY of biotin ECF transporter K03523 bioY; biotin transport system substrate-specific component
D RAK1035_0873 Structural element protein K09688 kpsM; capsular polysaccharide transport system permease protein
D RAK1035_0193 Capsule polysaccharide export inner-membrane protein K10107 kpsE; capsular polysaccharide transport system permease protein
D RAK1035_0871 Capsule polysaccharide export inner-membrane protein K10107 kpsE; capsular polysaccharide transport system permease protein
D RAK1035_0194 Capsular polysaccharide ABC transporter, ATP-binding protein KpsT K09689 kpsT; capsular polysaccharide transport system ATP-binding protein [EC:7.6.2.12]
D RAK1035_0870 Capsular polysaccharide ABC transporter, ATP-binding protein KpsT K09689 kpsT; capsular polysaccharide transport system ATP-binding protein [EC:7.6.2.12]
D RAK1035_2324 putative permease K07091 lptF; lipopolysaccharide export system permease protein
D RAK1035_2325 Permease, YjgP/YjgQ family K11720 lptG; lipopolysaccharide export system permease protein
D RAK1035_0919 Lipopolysaccharide ABC transporter, ATP-binding protein LptB K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D RAK1035_2281 Nitrous oxide reductase maturation transmembrane protein NosY K19341 nosY; Cu-processing system permease protein
D RAK1035_2282 Nitrous oxide reductase maturation protein NosF (ATPase) K19340 nosF; Cu-processing system ATP-binding protein
D RAK1035_2254 Lipoprotein releasing system transmembrane protein LolC K09808 lolC_E_F; lipoprotein-releasing system permease protein
D RAK1035_2600 Hypothetical protein K09808 lolC_E_F; lipoprotein-releasing system permease protein
D RAK1035_2253 Lipoprotein releasing system ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D RAK1035_2599 Lipoprotein releasing system ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D RAK1035_3665 Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE K02195 ccmC; heme exporter protein C
D RAK1035_3666 ABC transporter involved in cytochrome c biogenesis, CcmB subunit K02194 ccmB; heme exporter protein B
D RAK1035_3667 ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D RAK1035_0663 Cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D RAK1035_0662 Cell division transporter, ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D RAK1035_0361 ABC-type multidrug transport system, permease component K01992 ABC-2.P; ABC-2 type transport system permease protein
D RAK1035_1414 ABC-type multidrug transport system, permease component K01992 ABC-2.P; ABC-2 type transport system permease protein
D RAK1035_1720 ABC transporter permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D RAK1035_4077 ABC-type multidrug transport system, permease component K01992 ABC-2.P; ABC-2 type transport system permease protein
D RAK1035_1011 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RAK1035_1413 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RAK1035_1719 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RAK1035_2544 ABC transporter, permease protein, putative K02004 ABC.CD.P; putative ABC transport system permease protein
D RAK1035_2545 ABC transporter ATP-binding protein YvcR K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D RAK1035_3041 Iron-sulfur cluster assembly ATPase protein SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D RAK1035_3420 Multidrug and toxin extrusion (MATE) family efflux pump YdhE/NorM-like protein K26939 norM; MATE family, multidrug efflux pump
D RAK1035_0801 DNA-damage-inducible protein F K26937 dinF; MATE family, multidrug efflux pump
D RAK1035_2149 Multidrug and toxin extrusion (MATE) family efflux pump YdhE/NorM-like protein K26937 dinF; MATE family, multidrug efflux pump
D RAK1035_2161 Multidrug and toxin extrusion (MATE) family efflux pump YdhE/NorM-like protein K26937 dinF; MATE family, multidrug efflux pump
D RAK1035_2998 Multidrug and toxin extrusion (MATE) family efflux pump YdhE/NorM-like protein K26937 dinF; MATE family, multidrug efflux pump
D RAK1035_2513 Permease of the major facilitator superfamily K25223 arsJ; MFS transporter, APGE family, 1-arseno-3-phosphoglycerate exporter
D RAK1035_3746 Bacteriochlorophyll synthase 44.5 kDa chain K08226 pucC; MFS transporter, BCD family, chlorophyll transporter
D RAK1035_3756 PucC protein K08226 pucC; MFS transporter, BCD family, chlorophyll transporter
D RAK1035_1451 MFS family multidrug efflux protein, similarity to bicyclomycin resistance protein Bcr K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D RAK1035_3920 Bicyclomycin resistance protein K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D RAK1035_3350 Hypothetical protein K08221 yitG; MFS transporter, ACDE family, multidrug resistance protein
D RAK1035_1347 Arginine/ornithine antiporter ArcD K06902 UMF1; MFS transporter, UMF1 family
D RAK1035_0062 Phosphoenolpyruvate-protein phosphotransferase, nitrogen regulation associated K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D RAK1035_2131 Phosphocarrier protein, nitrogen regulation associated K02784 ptsH; phosphocarrier protein HPr
D RAK1035_2130 PTS system permease (IIAMan), nitrogen regulatory IIA protein K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D RAK1035_0921 PTS system nitrogen-specific IIA component, PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D RAK1035_1730 Aquaporin Z K06188 aqpZ; aquaporin Z
D RAK1035_1295 Voltage-gated sodium channel subunit K08714 VGSC; voltage-gated sodium channel
D RAK1035_0296 Ammonium transporter K03320 amt; ammonium transporter, Amt family
D RAK1035_2885 Ammonium transporter K03320 amt; ammonium transporter, Amt family
D RAK1035_0182 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RAK1035_0711 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RAK1035_0793 Maleylacetoacetate isomerase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RAK1035_1019 Glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RAK1035_2020 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RAK1035_3092 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RAK1035_3305 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RAK1035_3689 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RAK1035_1212 Hypothetical protein K07114 yfbK; Ca-activated chloride channel homolog
D RAK1035_1237 Large-conductance mechanosensitive channel K03282 mscL; large conductance mechanosensitive channel
D RAK1035_2928 Potassium efflux system KefA protein K05802 mscK; potassium-dependent mechanosensitive channel
D RAK1035_0880 Potassium efflux system KefA protein K22044 ybiO; moderate conductance mechanosensitive channel
D RAK1035_2671 Magnesium transporter K06213 mgtE; magnesium transporter
D RAK1035_1471 Flagellar motor rotation protein MotA K02556 motA; chemotaxis protein MotA
D RAK1035_2109 Flagellar motor rotation protein MotA K02556 motA; chemotaxis protein MotA
D RAK1035_1455 Flagellar motor rotation protein MotB K02557 motB; chemotaxis protein MotB
D RAK1035_2110 Flagellar motor rotation protein MotB K02557 motB; chemotaxis protein MotB
D RAK1035_2466 Ferric siderophore transport system, biopolymer transport protein ExbB K03561 exbB; biopolymer transport protein ExbB
D RAK1035_2467 Biopolymer transport protein ExbD/TolR K03559 exbD; biopolymer transport protein ExbD
D RAK1035_2468 Biopolymer transport protein ExbD/TolR K03559 exbD; biopolymer transport protein ExbD
D RAK1035_1200 MotA/TolQ/ExbB proton channel family protein K03562 tolQ; biopolymer transport protein TolQ
D RAK1035_1201 Tol biopolymer transport system, TolR protein K03560 tolR; biopolymer transport protein TolR
D RAK1035_0267 Magnesium and cobalt transport protein CorA K03284 corA; magnesium transporter
D RAK1035_1750 CrcB-like protein K06199 crcB; fluoride exporter
D RAK1035_3191 Co2 transporter containing CBS domains K03699 tlyC; magnesium and cobalt exporter, CNNM family
D RAK1035_0632 Outer membrane protein, putative K16079 omp31; outer membrane immunogenic protein
D RAK1035_0157 OmpA domain protein K16191 K16191; peptidoglycan-binding protein ArfA
D RAK1035_3731 OmpA domain protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D RAK1035_2821 Outer membrane transporter, OMPP1/FadL/TodX family K06076 fadL; long-chain fatty acid transport protein
D RAK1035_2825 Putative facilitator of salicylate uptake K06076 fadL; long-chain fatty acid transport protein
D RAK1035_1521 TonB-dependent hemin, ferrichrome receptor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D RAK1035_2784 Type I secretion outer membrane protein, TolC precursor K12340 tolC; outer membrane protein
D RAK1035_3791 Type I secretion system, outer membrane component LapE K12543 lapE; outer membrane protein, adhesin transport system
D RAK1035_0155 Capsular polysaccharide biosynthesis/export periplasmic protein WcbA K01991 wza; polysaccharide biosynthesis/export protein
D RAK1035_3550 Capsular polysaccharide biosynthesis/export periplasmic protein WcbA K01991 wza; polysaccharide biosynthesis/export protein
D RAK1035_3060 Outer membrane protein assembly factor YaeT precursor K07277 SAM50; outer membrane protein insertion porin family
D RAK1035_3677 Outer membrane protein YfgL K17713 bamB; outer membrane protein assembly factor BamB
D RAK1035_2349 Competence lipoprotein ComL, putative K05807 bamD; outer membrane protein assembly factor BamD
D RAK1035_2846 Outer membrane protein assembly factor YaeT precursor K07278 tamA; translocation and assembly module TamA
D RAK1035_2845 Hypothetical protein K09800 tamB; translocation and assembly module TamB
D RAK1035_0918 Protein-glutamate methylesterase family protein K09774 lptA; lipopolysaccharide export system protein LptA
D RAK1035_0917 Hypothetical protein K11719 lptC; lipopolysaccharide export system protein LptC
D RAK1035_2326 Outer membrane protein Imp, required for envelope biogenesis K04744 lptD; LPS-assembly protein
D RAK1035_2016 Hypothetical protein K03643 lptE; LPS-assembly lipoprotein
D RAK1035_3797 Magnesium and cobalt efflux protein CorC K06189 corC; hemolysin (HlyC) family protein
D RAK1035_4024 Cobalt-zinc-cadmium resistance protein CzcD K16264 czcD; cobalt-zinc-cadmium efflux system protein
D RAK1035_0840 ZIP zinc transporter family protein K07238 TC.ZIP; zinc transporter, ZIP family
D RAK1035_4040 Metal transporter, ZIP family K07238 TC.ZIP; zinc transporter, ZIP family
D RAK1035_0592 RND efflux system, inner membrane transporter CmeB K18138 acrB; multidrug efflux pump
D RAK1035_2847 RND multidrug efflux transporter K18138 acrB; multidrug efflux pump
D RAK1035_3680 RND multidrug efflux transporter K18989 vexF; multidrug efflux pump
D RAK1035_0053 Hypothetical protein K03297 emrE; small multidrug resistance pump
D RAK1035_3435 Ethidium bromide-methyl viologen resistance protein EmrE K03297 emrE; small multidrug resistance pump
D RAK1035_2940 Quaternary ammonium compound-resistance protein SugE K11741 sugE; quaternary ammonium compound-resistance protein SugE
D RAK1035_0014 RarD K05786 rarD; chloramphenicol-sensitive protein RarD
D RAK1035_3016 Integral membrane protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D RAK1035_4027 Protein of unknown function UPF0060 K09771 TC.SMR3; small multidrug resistance family-3 protein
D RAK1035_0273 C4-dicarboxylate transporter/malic acid transport protein K03304 tehA; tellurite resistance protein
D RAK1035_1417 K+-dependent Na+/Ca+ exchanger related-protein K07301 yrbG; cation:H+ antiporter
D RAK1035_3625 K+-dependent Na+/Ca+ exchanger related-protein K07301 yrbG; cation:H+ antiporter
D RAK1035_0529 Acetate permease ActP (cation/acetate symporter) K14393 actP; cation/acetate symporter
D RAK1035_1567 Acetate permease ActP (cation/acetate symporter) K14393 actP; cation/acetate symporter
D RAK1035_3624 Putative sodium/hydrogen exchanger family K03316 nhaP; Na+:H+ antiporter
D RAK1035_0036 Glutathione-regulated potassium-efflux system protein KefC K11747 kefB; glutathione-regulated potassium-efflux system protein KefB
D RAK1035_2411 Potassium uptake protein, integral membrane component, KtrB K03498 trkH; trk/ktr system potassium uptake protein
D RAK1035_3341 Potassium uptake protein TrkH K03498 trkH; trk/ktr system potassium uptake protein
D RAK1035_3858 Potassium uptake protein TrkH K03498 trkH; trk/ktr system potassium uptake protein
D RAK1035_2412 Trk system potassium uptake protein TrkA K03499 trkA; trk/ktr system potassium uptake protein
D RAK1035_3342 Trk system potassium uptake protein TrkA K03499 trkA; trk/ktr system potassium uptake protein
D RAK1035_2945 Benzoate transport protein K05782 benE; benzoate membrane transport protein
D RAK1035_2352 Chloride channel protein K03281 clcA; chloride channel protein, CIC family
D RAK1035_2915 Chromate transport protein ChrA K07240 chrA; chromate transporter
D RAK1035_2736 Sulfate permease K03321 TC.SULP; sulfate permease, SulP family
D RAK1035_3623 Sulfate permease K03321 TC.SULP; sulfate permease, SulP family
D RAK1035_0585 TRAP-type C4-dicarboxylate transport system, periplasmic component K11688 dctP; TRAP-type transport system periplasmic protein
D RAK1035_0697 TRAP-type C4-dicarboxylate transport system, periplasmic component K11688 dctP; TRAP-type transport system periplasmic protein
D RAK1035_0819 TRAP-type C4-dicarboxylate transport system, periplasmic component K11688 dctP; TRAP-type transport system periplasmic protein
D RAK1035_0927 TRAP-type C4-dicarboxylate transport system, periplasmic component K11688 dctP; TRAP-type transport system periplasmic protein
D RAK1035_0946 TRAP-type C4-dicarboxylate transport system, periplasmic component K11688 dctP; TRAP-type transport system periplasmic protein
D RAK1035_1053 TRAP-type C4-dicarboxylate transport system, periplasmic component K11688 dctP; TRAP-type transport system periplasmic protein
D RAK1035_1132 TRAP transporter solute receptor, unknown substrate 5 K11688 dctP; TRAP-type transport system periplasmic protein
D RAK1035_1250 TRAP-type C4-dicarboxylate transport system, periplasmic component K11688 dctP; TRAP-type transport system periplasmic protein
D RAK1035_1452 TRAP-type C4-dicarboxylate transport system, periplasmic component K11688 dctP; TRAP-type transport system periplasmic protein
D RAK1035_1711 TRAP transporter solute receptor, unknown substrate 4 K11688 dctP; TRAP-type transport system periplasmic protein
D RAK1035_1792 TRAP-type C4-dicarboxylate transport system, periplasmic component K11688 dctP; TRAP-type transport system periplasmic protein
D RAK1035_2057 TRAP-type transport system, periplasmic component, predicted N-acetylneuraminate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D RAK1035_2737 TRAP-type C4-dicarboxylate transport system, periplasmic component K11688 dctP; TRAP-type transport system periplasmic protein
D RAK1035_3617 TRAP transporter solute receptor, unknown substrate 7 K11688 dctP; TRAP-type transport system periplasmic protein
D RAK1035_4067 TRAP-type C4-dicarboxylate transport system, periplasmic component K11688 dctP; TRAP-type transport system periplasmic protein
D RAK1035_0584 TRAP-type transport system, small permease component, predicted N-acetylneuraminate transporter K11689 dctQ; TRAP-type transport system small permease protein
D RAK1035_0696 TRAP-type transport system, small permease component, predicted N-acetylneuraminate transporter K11689 dctQ; TRAP-type transport system small permease protein
D RAK1035_0820 TRAP-type transport system, small permease component, predicted N-acetylneuraminate transporter K11689 dctQ; TRAP-type transport system small permease protein
D RAK1035_0926 TRAP-type transport system, small permease component, predicted N-acetylneuraminate transporter K11689 dctQ; TRAP-type transport system small permease protein
D RAK1035_0944 TRAP-type transport system, small permease component, predicted N-acetylneuraminate transporter K11689 dctQ; TRAP-type transport system small permease protein
D RAK1035_1052 TRAP-type transport system, small permease component, predicted N-acetylneuraminate transporter K11689 dctQ; TRAP-type transport system small permease protein
D RAK1035_1131 TRAP dicarboxylate transporter, DctQ subunit, unknown substrate 5 K11689 dctQ; TRAP-type transport system small permease protein
D RAK1035_1249 TRAP-type transport system, small permease component, predicted N-acetylneuraminate transporter K11689 dctQ; TRAP-type transport system small permease protein
D RAK1035_1453 TRAP-type transport system, small permease component, predicted N-acetylneuraminate transporter K11689 dctQ; TRAP-type transport system small permease protein
D RAK1035_1712 TRAP dicarboxylate transporter, DctQ subunit, unknown substrate 4 K11689 dctQ; TRAP-type transport system small permease protein
D RAK1035_1793 TRAP-type transport system, small permease component, predicted N-acetylneuraminate transporter K11689 dctQ; TRAP-type transport system small permease protein
D RAK1035_2058 TRAP-type transport system, large permease component, predicted N-acetylneuraminate transporter K11689 dctQ; TRAP-type transport system small permease protein
D RAK1035_3618 TRAP dicarboxylate transporter, DctQ subunit, unknown substrate 7 K11689 dctQ; TRAP-type transport system small permease protein
D RAK1035_4058 TRAP dicarboxylate transporter, DctQ subunit, unknown substrate 6 K11689 dctQ; TRAP-type transport system small permease protein
D RAK1035_4065 TRAP-type transport system, small permease component, predicted N-acetylneuraminate transporter K11689 dctQ; TRAP-type transport system small permease protein
D RAK1035_0583 TRAP-type C4-dicarboxylate transport system, large permease component K11690 dctM; TRAP-type transport system large permease protein
D RAK1035_0695 TRAP-type C4-dicarboxylate transport system, large permease component K11690 dctM; TRAP-type transport system large permease protein
D RAK1035_0821 TRAP-type C4-dicarboxylate transport system, large permease component K11690 dctM; TRAP-type transport system large permease protein
D RAK1035_0925 TRAP-type C4-dicarboxylate transport system, large permease component K11690 dctM; TRAP-type transport system large permease protein
D RAK1035_0945 TRAP-type C4-dicarboxylate transport system, large permease component K11690 dctM; TRAP-type transport system large permease protein
D RAK1035_1051 TRAP-type C4-dicarboxylate transport system, large permease component K11690 dctM; TRAP-type transport system large permease protein
D RAK1035_1130 TRAP dicarboxylate transporter, DctM subunit, unknown substrate 5 K11690 dctM; TRAP-type transport system large permease protein
D RAK1035_1248 TRAP-type C4-dicarboxylate transport system, large permease component K11690 dctM; TRAP-type transport system large permease protein
D RAK1035_1454 TRAP-type C4-dicarboxylate transport system, large permease component K11690 dctM; TRAP-type transport system large permease protein
D RAK1035_1713 TRAP dicarboxylate transporter, DctM subunit, unknown substrate 4 K11690 dctM; TRAP-type transport system large permease protein
D RAK1035_1794 TRAP-type C4-dicarboxylate transport system, large permease component K11690 dctM; TRAP-type transport system large permease protein
D RAK1035_2059 TRAP-type transport system, large permease component, predicted N-acetylneuraminate transporter K11690 dctM; TRAP-type transport system large permease protein
D RAK1035_3619 TRAP dicarboxylate transporter, DctM subunit, unknown substrate 7 K11690 dctM; TRAP-type transport system large permease protein
D RAK1035_4066 TRAP-type C4-dicarboxylate transport system, large permease component K11690 dctM; TRAP-type transport system large permease protein
D RAK1035_1128 Hypothetical protein K03325 ACR3; arsenite transporter
D RAK1035_2514 Arsenical-resistance protein ACR3 K03325 ACR3; arsenite transporter
D RAK1035_1196 Na(+) H(+) antiporter subunit A K05559 phaA; multicomponent K+:H+ antiporter subunit A
D RAK1035_1195 Na(+) H(+) antiporter subunit C K05560 phaC; multicomponent K+:H+ antiporter subunit C
D RAK1035_1194 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit K05561 phaD; multicomponent K+:H+ antiporter subunit D
D RAK1035_1193 Na(+) H(+) antiporter subunit E K05562 phaE; multicomponent K+:H+ antiporter subunit E
D RAK1035_1192 Na(+) H(+) antiporter subunit F K05563 phaF; multicomponent K+:H+ antiporter subunit F
D RAK1035_1191 Na(+) H(+) antiporter subunit G K05564 phaG; multicomponent K+:H+ antiporter subunit G
D RAK1035_1866 putative peptidoglycan lipid II flippase MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D RAK1035_2941 putative peptidoglycan lipid II flippase MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D RAK1035_0960 Malonate transporter K13936 mdcF; malonate transporter and related proteins
D RAK1035_2311 Malonate transporter K13936 mdcF; malonate transporter and related proteins
D RAK1035_2227 Transporter, LysE family K06895 lysE; L-lysine exporter family protein LysE/ArgO
D RAK1035_1953 Transporter, LysE family K05834 rhtB; homoserine/homoserine lactone efflux protein
D RAK1035_2687 L-lysine permease K05835 rhtC; threonine efflux protein
D RAK1035_3742 AzlC family protein K26605 azlC; branched chain amino acid efflux pump
D RAK1035_3743 Hypothetical protein K26606 azlD; branched chain amino acid efflux pump
D RAK1035_0762 Tricarboxylate transport membrane protein TctA K07793 tctA; putative tricarboxylic transport membrane protein
D RAK1035_1148 Tricarboxylate transport membrane protein TctA K07793 tctA; putative tricarboxylic transport membrane protein
D RAK1035_3875 Tricarboxylate transport membrane protein TctA K07793 tctA; putative tricarboxylic transport membrane protein
D RAK1035_1147 Tricarboxylate transport protein TctB K07794 tctB; putative tricarboxylic transport membrane protein
D RAK1035_3876 Tricarboxylate transport protein TctB K07794 tctB; putative tricarboxylic transport membrane protein
D RAK1035_0764 Tricarboxylate transport protein TctC K07795 tctC; putative tricarboxylic transport membrane protein
D RAK1035_1146 Tricarboxylate transport protein TctC K07795 tctC; putative tricarboxylic transport membrane protein
D RAK1035_3877 Tricarboxylate transport protein TctC K07795 tctC; putative tricarboxylic transport membrane protein
D RAK1035_0961 putative transmembrane iron-regulated protein K22737 mbfA; erythrin-vacuolar iron transport family protein
D RAK1035_3899 Cell division protein FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D RAK1035_3419 Putative membrane protein K08970 rcnA; nickel/cobalt transporter (NicO) family protein
D RAK1035_3691 Hypothetical protein K15383 K15383; MtN3 and saliva related transmembrane protein
D RAK1035_2469 Ferric siderophore transport system, periplasmic binding protein TonB K03832 tonB; periplasmic protein TonB
D RAK1035_0324 Outer membrane lipoprotein precursor, OmpA family K03640 pal; peptidoglycan-associated lipoprotein
D RAK1035_1204 Outer membrane lipoprotein omp16 precursor K03640 pal; peptidoglycan-associated lipoprotein
D RAK1035_1203 TolB protein precursor, periplasmic protein K03641 tolB; TolB protein
D RAK1035_1155 Cytochrome c-type biogenesis protein CcdA (DsbD-like protein) K06196 ccdA; cytochrome c-type biogenesis protein
D RAK1035_2912 Hypothetical protein K06196 ccdA; cytochrome c-type biogenesis protein
D RAK1035_4026 Cytochrome c-type biogenesis protein CcdA (DsbD-like protein) K06196 ccdA; cytochrome c-type biogenesis protein
D RAK1035_4029 Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase K08344 scsB; suppressor for copper-sensitivity B
D RAK1035_0302 Type I secretion membrane fusion protein, HlyD family K12537 hasE; membrane fusion protein, type I secretion system
D RAK1035_1811 Type I secretion membrane fusion protein, HlyD family K12537 hasE; membrane fusion protein, type I secretion system
D RAK1035_3789 HlyD family secretion protein K12542 lapC; membrane fusion protein, adhesin transport system
D RAK1035_0593 RND efflux system, membrane fusion protein CmeA K03585 acrA; membrane fusion protein, multidrug efflux system
D RAK1035_2848 HlyD family secretion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D RAK1035_3679 putative Co/Zn/Cd efflux system membrane fusion protein K18990 vexE; membrane fusion protein, multidrug efflux system
D RAK1035_0552 Exopolysaccharide biosynthesis domain protein K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D RAK1035_0522 Exopolysaccharide transport protein, putative K25590 epsF; protein tyrosine kinase modulator
D RAK1035_2728 Regulatory protein TspO K05770 TSPO; translocator protein
D RAK1035_1973 Hypothetical protein K16348 ecnB; entericidin B
D RAK1035_3380 Cytochrome c heme lyase subunit CcmF K02198 ccmF; cytochrome c-type biogenesis protein CcmF
D RAK1035_4032 Cytochrome c heme lyase subunit CcmF K02198 ccmF; cytochrome c-type biogenesis protein CcmF
D RAK1035_0543 Transthyretin family protein K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
C 02044 Secretion system [BR:rok02044]
D RAK1035_2784 Type I secretion outer membrane protein, TolC precursor K12340 tolC; outer membrane protein
D RAK1035_0301 Type I secretion system ATPase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D RAK1035_1809 ABC transporter HlyB/MsbA family K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D RAK1035_0302 Type I secretion membrane fusion protein, HlyD family K12537 hasE; membrane fusion protein, type I secretion system
D RAK1035_1811 Type I secretion membrane fusion protein, HlyD family K12537 hasE; membrane fusion protein, type I secretion system
D RAK1035_3790 putative ATP-binding/permease fusion ABC transporter K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D RAK1035_3789 HlyD family secretion protein K12542 lapC; membrane fusion protein, adhesin transport system
D RAK1035_3791 Type I secretion system, outer membrane component LapE K12543 lapE; outer membrane protein, adhesin transport system
D RAK1035_0331 Type IV prepilin peptidase TadV/CpaA K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D RAK1035_0322 Flp pilus assembly protein RcpC/CpaB K02279 cpaB; pilus assembly protein CpaB
D RAK1035_0323 Type II/IV secretion system secretin RcpA/CpaC, associated with Flp pilus assembly K02280 cpaC; pilus assembly protein CpaC
D RAK1035_0325 Type II/IV secretion system ATPase TadZ/CpaE, associated with Flp pilus assembly K02282 cpaE; pilus assembly protein CpaE
D RAK1035_0326 Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D RAK1035_0327 Flp pilus assembly protein TadB K12510 tadB; tight adherence protein B
D RAK1035_0328 Type II/IV secretion system protein TadC, associated with Flp pilus assembly K12511 tadC; tight adherence protein C
D RAK1035_3819 Flp pilus assembly protein TadG K12513 tadE; tight adherence protein E
D RAK1035_0321 Flp pilus assembly protein, pilin Flp K02651 flp; pilus assembly protein Flp/PilA
D RAK1035_1345 Integral membrane protein YggT, involved in response to extracytoplasmic stress (osmotic shock) K02221 yggT; YggT family protein
D RAK1035_1474 Flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D RAK1035_2115 Flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D RAK1035_0250 Flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D RAK1035_1476 Flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D RAK1035_1467 Flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D RAK1035_2082 Flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D RAK1035_2080 Flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D RAK1035_1488 Flagellum-specific ATP synthase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D RAK1035_2079 Flagellum-specific ATP synthase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D RAK1035_0245 Flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D RAK1035_1465 Flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D RAK1035_0246 Hypothetical protein K02418 fliO; flagellar protein FliO/FliZ
D RAK1035_0247 Flagellar biosynthesis protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D RAK1035_1464 Flagellar biosynthesis protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D RAK1035_0248 Flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D RAK1035_1483 Flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D RAK1035_0249 Flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D RAK1035_1475 Flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D RAK1035_4017 Major pilus subunit of type IV secretion complex, VirB2 K03197 virB2; type IV secretion system protein VirB2
D RAK1035_4015 ATPase K03199 virB4; type IV secretion system protein VirB4 [EC:7.4.2.8]
D RAK1035_4013 Minor pilin of type IV secretion complex, VirB5 K03200 virB5; type IV secretion system protein VirB5
D RAK1035_4006 Inner membrane protein of type IV secretion of T-DNA complex, VirB6 K03201 virB6; type IV secretion system protein VirB6
D RAK1035_4012 Inner membrane protein forms channel for type IV secretion of T-DNA complex (VirB8) K03203 virB8; type IV secretion system protein VirB8
D RAK1035_4011 Outer membrane and periplasm component, has secretin-like domain, VirB9 K03204 virB9; type IV secretion system protein VirB9
D RAK1035_4010 Inner membrane protein forms channel for type IV secretion of T-DNA complex (VirB10) K03195 virB10; type IV secretion system protein VirB10
D RAK1035_4009 ATPase K03196 virB11; type IV secretion system protein VirB11 [EC:7.4.2.8]
D RAK1035_4000 T-DNA border endonuclease VirD2, RP4 TraG-like relaxase K18434 virD2; type IV secretion system T-DNA border endonuclease VirD2
D RAK1035_4001 Coupling protein VirD4, ATPase required for T-DNA transfer K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D RAK1035_1308 Protein export cytoplasm protein SecA ATPase RNA helicase K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RAK1035_1126 Export cytoplasm chaperone protein, SecB K03071 secB; preprotein translocase subunit SecB
D RAK1035_3670 Protein-export membrane protein SecD K12257 secDF; SecD/SecF fusion protein
D RAK1035_2626 Preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D RAK1035_3054 Preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D RAK1035_1217 Preprotein translocase secY subunit K03076 secY; preprotein translocase subunit SecY
D RAK1035_0856 Signal recognition particle, subunit Ffh SRP54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D RAK1035_2498 Signal recognition particle receptor protein FtsY (alpha subunit) K03110 ftsY; fused signal recognition particle receptor
D RAK1035_3671 Preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D RAK1035_1357 Inner membrane protein translocase component YidC, long form K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RAK1035_3166 Twin-arginine translocation protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D RAK1035_3165 Twin-arginine translocation protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D RAK1035_3164 Twin-arginine translocation protein TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:rok02042]
D RAK1035_3191 Co2 transporter containing CBS domains K03699 tlyC; magnesium and cobalt exporter, CNNM family
D RAK1035_0688 putative membrane protein hemolysin III-like protein K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:rok02022]
D RAK1035_2988 Phosphate regulon sensor protein PhoR (SphS) K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D RAK1035_2994 Phosphate regulon transcriptional regulatory protein PhoB (SphR) K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D RAK1035_3268 Sensor histidine kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D RAK1035_0216 DNA-binding response regulator PetR K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D RAK1035_1859 Sensor protein torS K07647 torS; two-component system, OmpR family, sensor histidine kinase TorS [EC:2.7.13.3]
D RAK1035_1860 DNA-binding response regulator TorR K07772 torR; two-component system, OmpR family, torCAD operon response regulator TorR
D RAK1035_2127 Sensor histidine kinase ChvG K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3]
D RAK1035_2126 DNA-binding response regulator ChvI K14981 chvI; two-component system, OmpR family, response regulator ChvI
D RAK1035_0380 DNA-binding response regulator K02483 K02483; two-component system, OmpR family, response regulator
D RAK1035_1546 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02483 K02483; two-component system, OmpR family, response regulator
D RAK1035_2588 Response regulator K02483 K02483; two-component system, OmpR family, response regulator
D RAK1035_2746 DNA-binding heavy metal response regulator K02483 K02483; two-component system, OmpR family, response regulator
D RAK1035_2735 Sensor histidine kinase K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3]
D RAK1035_3030 Nitrogen regulation protein NtrB K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D RAK1035_3029 Nitrogen regulation protein NtrC K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D RAK1035_3028 Nitrogen regulation protein NtrY K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D RAK1035_3027 Nitrogen regulation protein NtrX K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D RAK1035_1798 Two component sensor kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D RAK1035_2908 C4-dicarboxylate transport sensor protein DctB K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D RAK1035_1799 Response regulator of zinc sigma-54-dependent two-component system K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
D RAK1035_3646 Signal transduction histidine kinase HoxJ (hydrogenase regulation) K19661 hupT; two-component system, NtrC family, sensor histidine kinase HupT/HoxJ [EC:2.7.13.3]
D RAK1035_3630 Hydrogenase transcriptional regulatory protein hoxA K19641 hupR; two-component system, NtrC family, response regulator HupR/HoxA
D RAK1035_2436 Signal transduction histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D RAK1035_2086 Signal transduction histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RAK1035_2092 Signal transduction histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RAK1035_3366 Signal transduction histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RAK1035_3367 Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RAK1035_2088 Chemotaxis response regulator protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RAK1035_2091 Chemotaxis response regulator protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RAK1035_3361 Chemotaxis response regulator protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RAK1035_2710 Pole remodelling regulatory diguanylate cyclase K02488 pleD; two-component system, cell cycle response regulator [EC:2.7.7.65]
D RAK1035_3113 Sensory box histidine kinase/response regulator K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
D RAK1035_2802 DNA-binding response regulator CtrA K13584 ctrA; two-component system, cell cycle response regulator CtrA
D RAK1035_2084 Flagellar regulatory protein FleQ K10943 flrC; two-component system, response regulator FlrC
D RAK1035_0902 Sensor histidine kinase PrrB (RegB) K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D RAK1035_0904 Dna binding response regulator PrrA (RegA) K15012 regA; two-component system, response regulator RegA
D RAK1035_1723 Signal transduction histidine kinase K20975 K20975; two-component system, sensor histidine kinase [EC:2.7.13.3]
D RAK1035_1101 Chemotaxis protein histidine kinase K20976 hptB; histidine phosphotransfer protein HptB
D RAK1035_0624 Nitrate ABC transporter, nitrate-binding protein K22067 nasS; two-component system, oxyanion-binding sensor
D RAK1035_0625 Response regulator NasT K07183 nasT; two-component system, response regulator / RNA-binding antiterminator
C 02035 Bacterial motility proteins [BR:rok02035]
D RAK1035_2086 Signal transduction histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RAK1035_2092 Signal transduction histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RAK1035_3366 Signal transduction histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RAK1035_2089 Positive regulator of CheA protein activity (CheW) K03408 cheW; purine-binding chemotaxis protein CheW
D RAK1035_3363 Putative CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D RAK1035_3365 Positive regulator of CheA protein activity (CheW) K03408 cheW; purine-binding chemotaxis protein CheW
D RAK1035_2087 Chemotaxis protein methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D RAK1035_3362 Chemotaxis protein methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D RAK1035_2088 Chemotaxis response regulator protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RAK1035_2091 Chemotaxis response regulator protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RAK1035_3361 Chemotaxis response regulator protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RAK1035_3367 Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RAK1035_2090 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D RAK1035_2756 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RAK1035_3364 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D RAK1035_3369 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RAK1035_2080 Flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D RAK1035_1488 Flagellum-specific ATP synthase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D RAK1035_2079 Flagellum-specific ATP synthase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D RAK1035_0246 Hypothetical protein K02418 fliO; flagellar protein FliO/FliZ
D RAK1035_0247 Flagellar biosynthesis protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D RAK1035_1464 Flagellar biosynthesis protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D RAK1035_0248 Flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D RAK1035_1483 Flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D RAK1035_0249 Flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D RAK1035_1475 Flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D RAK1035_1474 Flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D RAK1035_2115 Flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D RAK1035_0250 Flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D RAK1035_1476 Flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D RAK1035_0573 Flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D RAK1035_2081 Flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D RAK1035_0244 Flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D RAK1035_2585 Flagellar motor switch protein K02416 fliM; flagellar motor switch protein FliM
D RAK1035_0245 Flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D RAK1035_1465 Flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D RAK1035_1467 Flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D RAK1035_2082 Flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D RAK1035_1459 Flagellar P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D RAK1035_2101 Flagellar P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D RAK1035_1480 Flagellar basal-body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D RAK1035_2118 Flagellar basal-body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D RAK1035_1479 Flagellar L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D RAK1035_2100 Flagellar L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D RAK1035_0243 Flagellar protein K02415 fliL; flagellar protein FliL
D RAK1035_1468 Flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D RAK1035_1478 Hypothetical protein K02415 fliL; flagellar protein FliL
D RAK1035_1484 Flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D RAK1035_2083 Flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D RAK1035_0242 TolA protein K02414 fliK; flagellar hook-length control protein FliK
D RAK1035_1515 Flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK
D RAK1035_1486 Flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D RAK1035_3905 Flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D RAK1035_1485 Flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D RAK1035_3904 Flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D RAK1035_1516 Flagellar basal-body rod modification protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D RAK1035_3903 Flagellar basal-body rod modification protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D RAK1035_1482 Flagellar basal-body rod protein FlgG K02391 flgF; flagellar basal-body rod protein FlgF
D RAK1035_3901 Flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D RAK1035_1481 Flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D RAK1035_2099 Flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D RAK1035_1514 Flagellar protein flgJ, peptidoglycan hydrolase K02395 flgJ; peptidoglycan hydrolase FlgJ
D RAK1035_2102 Flagellar protein FlgJ, peptidoglycan hydrolase K02395 flgJ; peptidoglycan hydrolase FlgJ
D RAK1035_1456 Flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D RAK1035_3902 Flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D RAK1035_1457 Flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D RAK1035_2103 Flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D RAK1035_1458 Flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D RAK1035_2104 Flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D RAK1035_2116 Hypothetical protein K09860 flgP; outer membrane protein FlgP
D RAK1035_1512 Flagellin protein FlaA K02406 fliC; flagellin
D RAK1035_2111 Flagellar hook-associated protein FliD K02407 fliD; flagellar hook-associated protein 2
D RAK1035_2093 Flagellar biosynthesis protein FliS K02422 fliS; flagellar secretion chaperone FliS
D RAK1035_2113 RNA polymerase sigma factor for flagellar operon K02405 fliA; RNA polymerase sigma factor FliA
D RAK1035_1471 Flagellar motor rotation protein MotA K02556 motA; chemotaxis protein MotA
D RAK1035_2109 Flagellar motor rotation protein MotA K02556 motA; chemotaxis protein MotA
D RAK1035_1455 Flagellar motor rotation protein MotB K02557 motB; chemotaxis protein MotB
D RAK1035_2110 Flagellar motor rotation protein MotB K02557 motB; chemotaxis protein MotB
D RAK1035_2084 Flagellar regulatory protein FleQ K10943 flrC; two-component system, response regulator FlrC
D RAK1035_2119 Negative regulator of flagellin synthesis flgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D RAK1035_1511 Flagellar protein FlaF K06602 flaF; flagellar biosynthesis activator protein FlaF
D RAK1035_1510 Flagellar basal-body rod modification protein FlgD K06601 flbT; flagellar biosynthesis repressor protein FlbT
D RAK1035_0321 Flp pilus assembly protein, pilin Flp K02651 flp; pilus assembly protein Flp/PilA
D RAK1035_0331 Type IV prepilin peptidase TadV/CpaA K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D RAK1035_0322 Flp pilus assembly protein RcpC/CpaB K02279 cpaB; pilus assembly protein CpaB
D RAK1035_0323 Type II/IV secretion system secretin RcpA/CpaC, associated with Flp pilus assembly K02280 cpaC; pilus assembly protein CpaC
D RAK1035_0325 Type II/IV secretion system ATPase TadZ/CpaE, associated with Flp pilus assembly K02282 cpaE; pilus assembly protein CpaE
D RAK1035_0326 Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:rok04812]
D RAK1035_0420 Rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D RAK1035_3891 Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D RAK1035_3892 Cell division protein FtsA K03590 ftsA; cell division protein FtsA
D RAK1035_1116 Chromosome (plasmid) partitioning protein ParA K03496 parA; chromosome partitioning protein
D RAK1035_1334 ATPase involved in chromosome partitioning K03496 parA; chromosome partitioning protein
D RAK1035_3973 Plasmid replication protein RepA K03496 parA; chromosome partitioning protein
D RAK1035_1115 Chromosome (plasmid) partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RAK1035_2400 ParB-like nuclease domain protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RAK1035_3980 Putative plasmid stabilization protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:rok04147]
D RAK1035_3539 Fructose-bisphosphate aldolase class I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D RAK1035_3647 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RAK1035_2424 NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RAK1035_2427 NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RAK1035_2648 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RAK1035_3538 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D RAK1035_0708 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RAK1035_2549 Microsomal dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D RAK1035_1731 Heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RAK1035_1313 Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D RAK1035_3415 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RAK1035_3115 Inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D RAK1035_1919 Translation elongation factor Tu K02358 tuf; elongation factor Tu
D RAK1035_2620 Translation elongation factor Tu K02358 tuf; elongation factor Tu
D RAK1035_1294 Bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D RAK1035_0378 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D RAK1035_0792 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAK1035_0815 Acetyl-CoA acetyltransferase of ethylmalonyl-CoA pathway K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAK1035_1340 Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAK1035_1986 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAK1035_1003 Adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D RAK1035_0531 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D RAK1035_1218 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D RAK1035_2706 Adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D RAK1035_1232 Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D RAK1035_1105 Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D RAK1035_0145 NG,NG-dimethylarginine dimethylaminohydrolase 1 K01482 DDAH; dimethylargininase [EC:3.5.3.18]
D RAK1035_1677 Dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D RAK1035_0460 Glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D RAK1035_0947 Glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RAK1035_1865 Glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RAK1035_2880 Glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RAK1035_3437 Glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RAK1035_3439 Glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RAK1035_3454 Glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RAK1035_3542 Porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D RAK1035_2121 Pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D RAK1035_1337 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D RAK1035_1900 IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D RAK1035_0666 Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RAK1035_3780 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RAK1035_2135 Electron transfer flavoprotein, alpha subunit K03522 fixB; electron transfer flavoprotein alpha subunit
D RAK1035_3816 NAD-specific glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D RAK1035_1783 Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D RAK1035_3413 Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D RAK1035_3230 Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 02048 Prokaryotic defense system [BR:rok02048]
D RAK1035_0391 Type I restriction-modification system, restriction subunit R K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D RAK1035_1842 Type I restriction-modification system, restriction subunit R K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D RAK1035_2536 Type I restriction-modification system, restriction subunit R K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D RAK1035_0389 Type I restriction-modification system, specificity subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D RAK1035_1844 Type I restriction-modification system, specificity subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D RAK1035_2534 Type I restriction-modification system, specificity subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D RAK1035_0388 Type I restriction-modification system, DNA-methyltransferase subunit M K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D RAK1035_1843 Type I restriction-modification system, DNA-methyltransferase subunit M K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D RAK1035_2535 Type I restriction-modification system, DNA-methyltransferase subunit M K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D RAK1035_1276 Modification methylase K13581 ccrM; modification methylase [EC:2.1.1.72]
D RAK1035_1817 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RAK1035_3649 Modification methylase HhaI K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RAK1035_3984 Hypothetical protein K19155 yhaV; toxin YhaV [EC:3.1.-.-]
D RAK1035_3983 HtaR suppressor protein K19156 prlF; antitoxin PrlF
D RAK1035_1434 Hypothetical protein K18923 stbD; antitoxin StbD
D RAK1035_0121 YoeB toxin protein K19158 yoeB; toxin YoeB [EC:3.1.-.-]
D RAK1035_0120 YefM protein (antitoxin to YoeB) K19159 yefM; antitoxin YefM
D RAK1035_1435 Death on curing protein, Doc toxin K07341 doc; death on curing protein
D RAK1035_3891 Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D RAK1035_0420 Rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D RAK1035_2141 Topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D RAK1035_1436 Topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D RAK1035_2521 Glutamyl-tRNA(Gln) synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RAK1035_3375 Glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RAK1035_3408 YgfY K09159 cptB; antitoxin CptB
D RAK1035_1061 Hypothetical protein K28190 socB; DNA replication inhibitor toxin SocB
D RAK1035_3045 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:rok01504]
D RAK1035_2199 Beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D RAK1035_0593 RND efflux system, membrane fusion protein CmeA K03585 acrA; membrane fusion protein, multidrug efflux system
D RAK1035_2848 HlyD family secretion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D RAK1035_0592 RND efflux system, inner membrane transporter CmeB K18138 acrB; multidrug efflux pump
D RAK1035_2847 RND multidrug efflux transporter K18138 acrB; multidrug efflux pump
D RAK1035_1531 Cu(I)-responsive transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D RAK1035_2784 Type I secretion outer membrane protein, TolC precursor K12340 tolC; outer membrane protein
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:rok00537]
D RAK1035_2549 Microsomal dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:rok03100]
D RAK1035_3934 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RAK1035_3940 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RAK1035_3971 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RAK1035_3930 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RAK1035_3957 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RAK1035_3961 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RAK1035_3962 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RAK1035_3966 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D RAK1035_3949 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D RAK1035_3950 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D RAK1035_3956 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D RAK1035_3931 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D RAK1035_3972 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D RAK1035_3927 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RAK1035_3948 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RAK1035_3970 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RAK1035_3923 tRNA-His K14226 tRNA-His; tRNA His
D RAK1035_3933 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D RAK1035_3939 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D RAK1035_3928 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RAK1035_3946 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RAK1035_3951 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RAK1035_3958 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RAK1035_3967 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RAK1035_3945 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D RAK1035_3937 tRNA-Met K14230 tRNA-Met; tRNA Met
D RAK1035_3943 tRNA-Met K14230 tRNA-Met; tRNA Met
D RAK1035_3959 tRNA-Met K14230 tRNA-Met; tRNA Met
D RAK1035_3969 tRNA-Met K14230 tRNA-Met; tRNA Met
D RAK1035_3944 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D RAK1035_3924 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D RAK1035_3954 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D RAK1035_3964 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D RAK1035_3947 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RAK1035_3955 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RAK1035_3960 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RAK1035_3965 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RAK1035_3925 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RAK1035_3929 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RAK1035_3963 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RAK1035_3953 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D RAK1035_3926 tRNA-Val K14237 tRNA-Val; tRNA Val
D RAK1035_3952 tRNA-Val K14237 tRNA-Val; tRNA Val
D RAK1035_3968 tRNA-Val K14237 tRNA-Val; tRNA Val
D RAK1035_3932 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RAK1035_3938 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RAK1035_3935 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RAK1035_3941 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RAK1035_3936 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D RAK1035_3942 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D RAK1035_1992 3-hydroxyacyl-CoA dehydrogenase K27497 K27497; carnitine 3-dehydrogenase / betainyl-CoA thioesterase [EC:1.1.1.108 3.1.2.33]
D RAK1035_0822 Putative histidinol dehydrogenase K15509 hpsN; sulfopropanediol 3-dehydrogenase [EC:1.1.1.308]
D RAK1035_2931 Putative histidinol dehydrogenase K15509 hpsN; sulfopropanediol 3-dehydrogenase [EC:1.1.1.308]
D RAK1035_2056 Hypothetical protein K22025 denD; D-erythronate 2-dehydrogenase [EC:1.1.1.410]
D RAK1035_2060 D-beta-hydroxybutyrate dehydrogenase K08319 ltnD; L-threonate 2-dehydrogenase [EC:1.1.1.411]
D RAK1035_2981 PQQ-dependent oxidoreductase, gdhB family K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-]
D RAK1035_2512 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase K25224 gapdh; glyceraldehyde-3-phosphate dehydrogenase (arsenate-transferring) [EC:1.2.1.107]
D RAK1035_2346 Aldehyde dehydrogenase K23463 tgnC; (Z)-2-((N-methylformamido)methylene)-5-hydroxybutyrolactone dehydrogenase [EC:1.2.1.-]
D RAK1035_2862 Xanthine dehydrogenase iron-sulfur subunit K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3]
D RAK1035_3393 Carbon monoxide dehydrogenase small chain K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3]
D RAK1035_3842 Carbon monoxide dehydrogenase small chain K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3]
D RAK1035_3391 Carbon monoxide dehydrogenase medium chain K03519 coxM; aerobic carbon-monoxide dehydrogenase medium subunit [EC:1.2.5.3]
D RAK1035_3841 Carbon monoxide dehydrogenase medium chain K03519 coxM; aerobic carbon-monoxide dehydrogenase medium subunit [EC:1.2.5.3]
D RAK1035_3392 Carbon-monoxide dehydrogenase form II, large subunit K03520 coxL; aerobic carbon-monoxide dehydrogenase large subunit [EC:1.2.5.3]
D RAK1035_3843 Carbon monoxide dehydrogenase large chain K03520 coxL; aerobic carbon-monoxide dehydrogenase large subunit [EC:1.2.5.3]
D RAK1035_3387 Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits K04090 E1.2.7.8; indolepyruvate ferredoxin oxidoreductase [EC:1.2.7.8]
D RAK1035_1734 2,4-dienoyl-CoA reductase, NADPH K00219 fadH; 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34]
D RAK1035_1691 Pyrroloquinoline-quinone synthase K06137 pqqC; pyrroloquinoline-quinone synthase [EC:1.3.3.11]
D RAK1035_2152 Isoquinoline 1-oxidoreductase alpha subunit K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16]
D RAK1035_2753 Isoquinoline 1-oxidoreductase alpha subunit K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16]
D RAK1035_3125 Isoquinoline 1-oxidoreductase alpha subunit K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16]
D RAK1035_2151 Isoquinoline 1-oxidoreductase beta subunit K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16]
D RAK1035_2752 Isoquinoline 1-oxidoreductase beta subunit K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16]
D RAK1035_3126 Isoquinoline 1-oxidoreductase beta subunit K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16]
D RAK1035_3503 putative N-methylproline demethylase K22551 hpbA; N-methyl-L-proline demethylase [EC:1.5.3.-]
D RAK1035_1321 Electron transfer flavoprotein-ubiquinone oxidoreductase K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1]
D RAK1035_0047 Oxidoreductase, zinc-binding dehydrogenase family K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D RAK1035_0614 Quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D RAK1035_2165 Bifunctional protein: zinc-containing alcohol dehydrogenase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D RAK1035_2667 Oxidoreductase, zinc-binding dehydrogenase family K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D RAK1035_3890 Quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D RAK1035_1814 FMN-dependent NADH-azoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D RAK1035_1107 Peptide methionine sulfoxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D RAK1035_1176 Peptide methionine sulfoxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D RAK1035_1177 Peptide methionine sulfoxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D RAK1035_0834 Glutathione S-transferase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D RAK1035_2506 Glutathione S-transferase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D RAK1035_1944 Glutathione S-transferase, omega K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7]
D RAK1035_1766 Putative sulfite oxidase subunit YedY K07147 msrP; methionine sulfoxide reductase catalytic subunit [EC:1.8.-.-]
D RAK1035_0381 Hypothetical protein K17893 AOX1; ubiquinol oxidase [EC:1.10.3.11]
D RAK1035_1447 Cytochrome c551 peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D RAK1035_2169 Non-heme chloroperoxidase K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10]
D RAK1035_2192 Non-heme chloroperoxidase K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10]
D RAK1035_2222 Non-heme chloroperoxidase K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10]
D RAK1035_3785 Thiol peroxidase, Bcp-type K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D RAK1035_0201 Peroxiredoxin family protein/glutaredoxin K24157 prxII; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D RAK1035_0501 Alkyl hydroperoxide reductase subunit C-like protein K24158 prx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D RAK1035_3822 Pirin, N-terminal:Pirin, C-terminal K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D RAK1035_2890 Hypothetical protein K22342 dmmA; dimethylamine monooxygenase subunit A [EC:1.14.13.238]
D RAK1035_2889 Flavodoxin reductase (ferredoxin-NADPH reductase) family 1 K22343 dmmB; dimethylamine monooxygenase subunit B [EC:1.14.13.238]
D RAK1035_2888 Hypothetical protein K22344 dmmC; dimethylamine monooxygenase subunit C [EC:1.14.13.238]
D RAK1035_2345 Alkanal monooxygenase alpha chain K23464 tgnB; flavin-dependent trigonelline monooxygenase, oxygenase component [EC:1.14.14.-]
D RAK1035_2958 Fatty acid hydroxylase-like protein K19706 FAH; dihydroceramide fatty acyl 2-hydroxylase [EC:1.14.18.7]
D RAK1035_4084 Multicopper oxidase K22348 moxA; manganese oxidase [EC:1.16.3.3]
D RAK1035_1068 Hypothetical protein K22349 mnxG; manganese oxidase [EC:1.16.3.3]
D RAK1035_3237 Flavodoxin reductase (ferredoxin-NADPH reductase) family 1 K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D RAK1035_0713 Arsenate reductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D RAK1035_1689 Coenzyme PQQ synthesis protein E K06139 pqqE; PqqA peptide cyclase [EC:1.21.98.4]
D RAK1035_2783 Protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D RAK1035_3022 Protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D RAK1035_0352 Cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D RAK1035_2924 S-adenosyl-L-methionine dependent methyltransferase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D RAK1035_4111 Cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D RAK1035_1208 Trans-aconitate 2-methyltransferase K00598 tam; trans-aconitate 2-methyltransferase [EC:2.1.1.144]
D RAK1035_3417 Methyltransferase-like protein K05303 K05303; O-methyltransferase [EC:2.1.1.-]
D RAK1035_1529 Methyltransferase K07444 ypsC; putative N6-adenine-specific DNA methylase [EC:2.1.1.-]
D RAK1035_1066 putative carbamoyl transferase, NodU family K00612 nodU; carbamoyltransferase [EC:2.1.3.-]
D RAK1035_1185 Nodulation protein nolO K00612 nodU; carbamoyltransferase [EC:2.1.3.-]
D RAK1035_0803 3-oxoacyl-acyl-carrier-protein synthase, KASIII K16872 E2.3.1.207; beta-ketodecanoyl-[acyl-carrier-protein] synthase [EC:2.3.1.207]
D RAK1035_3796 Apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D RAK1035_4042 Apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D RAK1035_3206 1-acyl-sn-glycerol-3-phosphate acyltransferase K22617 olsA; lyso-ornithine lipid O-acyltransferase [EC:2.3.1.270]
D RAK1035_1994 Hypothetical protein K27837 cdhC; 3-dehydrocarnitine:acetyl-CoA trimethylamine transferase [EC:2.3.1.317]
D RAK1035_1257 Hypothetical protein K27838 E2.3.1.319; 3,5-dioxohexanoate:acetyl-CoA acetone transferase [EC:2.3.1.319]
D RAK1035_0888 IAA acetyltransferase K03829 yedL; putative acetyltransferase [EC:2.3.1.-]
D RAK1035_2836 3-oxoacyl-acyl-carrier-protein synthase, KASII K14660 nodE; nodulation protein E [EC:2.3.1.-]
D RAK1035_0007 Putative acetyltransferase K24217 mnaT; L-amino acid N-acyltransferase [EC:2.3.1.-]
D RAK1035_0480 Leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D RAK1035_3260 Arginine-tRNA-protein transferase K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29]
D RAK1035_3130 Putative hemolysin K22310 olsB; L-ornithine Nalpha-acyltransferase [EC:2.3.2.30]
D RAK1035_3207 Hypothetical protein K22310 olsB; L-ornithine Nalpha-acyltransferase [EC:2.3.2.30]
D RAK1035_0513 Prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D RAK1035_2279 Nitrous oxide reductase maturation periplasmic protein NosX K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D RAK1035_3462 Nitrous oxide reductase maturation periplasmic protein NosX K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D RAK1035_2061 Hypothetical protein K21948 otnK; 3-dehydrotetronate 4-kinase [EC:2.7.1.217]
D RAK1035_3257 Glutamate-ammonia ligase adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D RAK1035_3532 Selenoprotein O and cysteine-containing-like protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108]
D RAK1035_2005 Hydrolase, alpha/beta fold family functionally coupled to Phosphoribulokinase K19311 lipV; lipase [EC:3.1.1.-]
D RAK1035_1197 4-hydroxybenzoyl-CoA thioesterase family active site K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D RAK1035_2642 3-hydroxyacyl-CoA dehydrogenase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D RAK1035_1760 Phosphoglycerate mutase family protein K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D RAK1035_2743 Hypothetical protein K25227 sdsA1; linear primary-alkylsulfatase [EC:3.1.6.21]
D RAK1035_2309 Putative deoxyribonuclease YcfH K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D RAK1035_2662 Hydrolase, alpha/beta fold family functionally coupled to Phosphoribulokinase K01175 ybfF; esterase [EC:3.1.-.-]
D RAK1035_1672 D-alanyl-D-alanine carboxypeptidase K01286 E3.4.16.4; D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4]
D RAK1035_2067 Peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D RAK1035_2068 Peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D RAK1035_1084 Carbon-nitrogen hydrolase K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128]
D RAK1035_0786 Agmatinase K18459 gpuA; guanidinopropionase [EC:3.5.3.17]
D RAK1035_1390 ATPase, MoxR family K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D RAK1035_2062 Ribulose-5-phosphate 4-epimerase K22130 otnC; 3-dehydro-4-phosphotetronate decarboxylase [EC:4.1.1.104]
D RAK1035_3452 NAD(P)HX epimerase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D RAK1035_3390 Threonine dehydratase K01751 E4.3.1.15; diaminopropionate ammonia-lyase [EC:4.3.1.15]
D RAK1035_2063 Hydroxypyruvate isomerase K22131 otnI; 2-dehydrotetronate isomerase [EC:5.3.1.35]
D RAK1035_1670 Cu+ P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D RAK1035_4118 Lead, cadmium, zinc and mercury transporting ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D RAK1035_4052 Lead, cadmium, zinc and mercury transporting ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
C 99981 Carbohydrate metabolism
D RAK1035_0161 Sugar/maltose fermentation stimulation-like protein K06206 sfsA; sugar fermentation stimulation protein A
D RAK1035_1858 Hypothetical protein K11930 torT; periplasmic protein TorT
D RAK1035_1759 Deacetylase K04768 acuC; acetoin utilization protein AcuC
C 99982 Energy metabolism
D RAK1035_2780 Formate dehydrogenase chain D K02379 fdhD; FdhD protein
D RAK1035_3741 Formate dehydrogenase chain D K02379 fdhD; FdhD protein
D RAK1035_0072 4Fe-4S ferredoxin, iron-sulfur binding K05524 fdxA; ferredoxin
D RAK1035_0097 Rubisco activation protein CbbO K02448 norD; nitric oxide reductase NorD protein
D RAK1035_0098 Nitric oxide reductase activation protein NorQ K04748 norQ; nitric oxide reductase NorQ protein
D RAK1035_2136 Electron transfer flavoprotein, beta subunit K03521 fixA; electron transfer flavoprotein beta subunit
C 99983 Lipid metabolism
D RAK1035_2320 Acyl-CoA dehydrogenase K09456 aidB; putative acyl-CoA dehydrogenase
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D RAK1035_0471 Arginine/ornithine antiporter ArcD K06203 cysZ; CysZ protein
D RAK1035_2009 Hypothetical protein K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D RAK1035_3527 Phosphate transport regulator (PhoU-like protein) K08992 lapA; lipopolysaccharide assembly protein A
C 99987 Cofactor metabolism
D RAK1035_0887 CobW GTPase involved in cobalt insertion for B12 biosynthesis K02234 cobW; cobalamin biosynthesis protein CobW
D RAK1035_1073 Uncharacterized protein EC-HemY K02498 hemY; HemY protein
D RAK1035_1499 Ubiquinone biosynthesis monooxygenase UbiB K03688 ubiB; ubiquinone biosynthesis protein
D RAK1035_3739 Molybdopterin-guanine dinucleotide biosynthesis protein MobB K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein
D RAK1035_2722 Lip3/bchO family protein K06049 bchO; magnesium chelatase accessory protein
D RAK1035_0780 hypothetical protein K18587 COQ9; ubiquinone biosynthesis protein COQ9
D RAK1035_3035 Putative oligoketide cyclase/lipid transport protein K18588 COQ10; coenzyme Q-binding protein COQ10
C 99988 Secondary metabolism
D RAK1035_0740 putative esterase lipoprotein LpqC K03932 lpqC; polyhydroxybutyrate depolymerase
D RAK1035_0908 Putative polyhydroxybutyrate depolymerase K03932 lpqC; polyhydroxybutyrate depolymerase
D RAK1035_2448 putative esterase lipoprotein LpqC K03932 lpqC; polyhydroxybutyrate depolymerase
D RAK1035_1738 NADPH-dependent FMN reductase domain protein K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone)
C 99999 Others
D RAK1035_2185 Glyoxalase family protein K15975 K15975; glyoxalase family protein
D RAK1035_2171 Glyoxalase family protein K06999 K06999; phospholipase/carboxylesterase
D RAK1035_3683 Phospholipase/carboxylesterase family protein K06999 K06999; phospholipase/carboxylesterase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D RAK1035_0137 Cold shock protein CspA K03704 cspA; cold shock protein
D RAK1035_1931 Cold shock protein CspA K03704 cspA; cold shock protein
D RAK1035_2690 Cold shock protein CspB K03704 cspA; cold shock protein
D RAK1035_3922 Cold shock family protein K03704 cspA; cold shock protein
D RAK1035_2288 Transcription accessory protein (S1 RNA-binding domain) K06959 tex; protein Tex
C 99974 Translation
D RAK1035_4076 ABC-type multidrug transport system, permease component K13926 rbbA; ribosome-dependent ATPase
D RAK1035_4098 Metallo-beta-lactamase family protein, RNA-specific K07576 K07576; metallo-beta-lactamase family protein
C 99975 Protein processing
D RAK1035_0578 ATP-dependent Clp protease adaptor protein ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D RAK1035_3451 Cell division trigger factor K03545 tig; trigger factor
D RAK1035_1767 Membrane protein YedZ K17247 msrQ; methionine sulfoxide reductase heme-binding subunit
D RAK1035_4092 Hypothetical protein K17247 msrQ; methionine sulfoxide reductase heme-binding subunit
D RAK1035_0105 Urease accessory protein UreE K03187 ureE; urease accessory protein
D RAK1035_0597 Urease accessory protein UreE K03187 ureE; urease accessory protein
D RAK1035_0104 Urease accessory protein UreF K03188 ureF; urease accessory protein
D RAK1035_0596 Urease accessory protein UreF K03188 ureF; urease accessory protein
D RAK1035_0101 Urease accessory protein UreG K03189 ureG; urease accessory protein
D RAK1035_0595 Urease accessory protein UreG K03189 ureG; urease accessory protein
D RAK1035_0100 Urease accessory protein UreD K03190 ureD; urease accessory protein
D RAK1035_0602 Urease accessory protein UreD K03190 ureD; urease accessory protein
D RAK1035_0805 HupE-UreJ family metal transporter K03192 ureJ; urease accessory protein
D RAK1035_1709 tmRNA-binding protein SmpB K03664 smpB; SsrA-binding protein
D RAK1035_3629 NiFe hydrogenase metallocenter assembly protein HypC K04653 hypC; hydrogenase expression/formation protein HypC
D RAK1035_3637 Hydrogenase maturation protein HupF/HypC/HoxL K04653 hypC; hydrogenase expression/formation protein HypC
D RAK1035_3628 NiFe hydrogenase metallocenter assembly protein HypD K04654 hypD; hydrogenase expression/formation protein HypD
D RAK1035_3627 NiFe hydrogenase metallocenter assembly protein HypE K04655 hypE; hydrogenase expression/formation protein HypE
D RAK1035_3643 NiFe hydrogenase metallocenter assembly protein HypF K04656 hypF; hydrogenase maturation protein HypF
D RAK1035_0235 MG(2+) chelatase family protein K07391 comM; magnesium chelatase family protein
D RAK1035_1134 Hypothetical protein K07395 K07395; putative proteasome-type protease
D RAK1035_0641 XdhC protein (assists in molybdopterin insertion into xanthine dehydrogenase) K07402 xdhC; xanthine dehydrogenase accessory factor
D RAK1035_3395 Carbon monoxide dehydrogenase F protein K07402 xdhC; xanthine dehydrogenase accessory factor
D RAK1035_3846 Carbon monoxide dehydrogenase F protein K07402 xdhC; xanthine dehydrogenase accessory factor
C 99976 Replication and repair
D RAK1035_2938 Hypothetical protein K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein
D RAK1035_1311 DNA repair protein RadC K03630 radC; DNA repair protein RadC
D RAK1035_0294 DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC
D RAK1035_0410 Hypothetical protein K07459 ybjD; putative ATP-dependent endonuclease of the OLD family
D RAK1035_0232 Endonuclease K07460 yraN; putative endonuclease
D RAK1035_0314 Rossmann fold nucleotide-binding protein Smf K04096 smf; DNA processing protein
D RAK1035_1224 Holliday junction DNA helicase K07478 ycaJ; putative ATPase
D RAK1035_1835 Mobile element protein K07483 K07483; transposase
D RAK1035_3318 Mobile element protein K07483 K07483; transposase
D RAK1035_3319 Mobile element protein K07486 K07486; transposase
D RAK1035_4061 Mobile element protein K07486 K07486; transposase
D RAK1035_3400 transposase K07491 rayT; REP-associated tyrosine transposase
D RAK1035_1822 Mobile element protein K07497 K07497; putative transposase
D RAK1035_1823 Mobile element protein K07497 K07497; putative transposase
D RAK1035_2107 Mobile element protein K07497 K07497; putative transposase
D RAK1035_2108 Mobile element protein K07497 K07497; putative transposase
D RAK1035_2292 Mobile element protein K07497 K07497; putative transposase
D RAK1035_2293 Mobile element protein K07497 K07497; putative transposase
D RAK1035_2399 Hypothetical protein K07497 K07497; putative transposase
D RAK1035_2537 Mobile element protein K07497 K07497; putative transposase
D RAK1035_2538 Mobile element protein K07497 K07497; putative transposase
D RAK1035_2740 Mobile element protein K07497 K07497; putative transposase
D RAK1035_2852 Mobile element protein K07497 K07497; putative transposase
D RAK1035_2853 Mobile element protein K07497 K07497; putative transposase
D RAK1035_3296 Mobile element protein K07497 K07497; putative transposase
D RAK1035_3297 Mobile element protein K07497 K07497; putative transposase
D RAK1035_3320 Mobile element protein K07497 K07497; putative transposase
D RAK1035_3592 Mobile element protein K07497 K07497; putative transposase
D RAK1035_3606 Mobile element protein K07497 K07497; putative transposase
D RAK1035_4062 Mobile element protein K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D RAK1035_1747 Hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D RAK1035_3572 Sugar transporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family
D RAK1035_2921 High-affinity choline uptake protein BetT K03451 TC.BCT; betaine/carnitine transporter, BCCT family
D RAK1035_1607 putative low-affinity inorganic phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family
D RAK1035_1890 Sodium:alanine symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D RAK1035_0446 Cytosine/purine/uracil/thiamine/allantoin permease family protein K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family
D RAK1035_0450 Cytosine/purine/uracil/thiamine/allantoin permease family protein K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family
C 99978 Cell growth
D RAK1035_2500 Intracellular septation protein A K06190 ispZ; intracellular septation protein
D RAK1035_3719 Peptidase, M23/M37 family K22719 envC; murein hydrolase activator
C 99993 Cell motility
C 99995 Signaling proteins
D RAK1035_3465 Universal stress family protein K14061 uspF; universal stress protein F
D RAK1035_0851 Universal stress protein (Usp) K11932 uspG; universal stress protein G
D RAK1035_3106 GTP-binding protein TypA/BipA K06207 typA; GTP-binding protein
D RAK1035_3576 Hypothetical protein K07167 chrR; putative transcriptional regulator
D RAK1035_1639 CBS-domain-containing membrane protein K07168 K07168; CBS domain-containing membrane protein
D RAK1035_3799 Phosphate starvation-inducible protein PhoH, predicted ATPase K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D RAK1035_0528 putative signal-transduction protein K07182 K07182; CBS domain-containing protein
C 99992 Structural proteins
D RAK1035_0300 Lipoprotein VacJ K04754 mlaA; phospholipid-binding lipoprotein MlaA
D RAK1035_0154 Capsular polysaccharide export system protein KpsS K07265 kpsS; capsular polysaccharide export protein
D RAK1035_0156 Capsular polysaccharide biosynthesis/export periplasmic protein WcbA K07266 kpsC; capsular polysaccharide export protein
D RAK1035_0652 Lyzozyme M1 (1,4-beta-N-acetylmuramidase) K07273 acm; lysozyme
D RAK1035_3097 Outer membrane protein W precursor K07275 ompW; outer membrane protein
D RAK1035_0703 AsmA family protein K07289 asmA; AsmA protein
D RAK1035_4075 HlyD family secretion protein K01993 ABC-2.TX; HlyD family secretion protein
D RAK1035_2932 Transporter, permease K11744 tqsA; AI-2 transport protein TqsA
D RAK1035_3383 Cytochrome c-type biogenesis protein CcmE, heme chaperone K02197 ccmE; cytochrome c-type biogenesis protein CcmE
D RAK1035_0020 Hypothetical protein K02200 ccmH; cytochrome c-type biogenesis protein CcmH
D RAK1035_3379 Cytochrome c heme lyase subunit CcmL K02200 ccmH; cytochrome c-type biogenesis protein CcmH
D RAK1035_4030 Cytochrome c heme lyase subunit CcmH K02200 ccmH; cytochrome c-type biogenesis protein CcmH
C 99994 Others
D RAK1035_2993 Phosphate transport system regulatory protein PhoU K02039 phoU; phosphate transport system protein
D RAK1035_0910 Glucans biosynthesis protein G precursor K03670 mdoG; periplasmic glucans biosynthesis protein
D RAK1035_0266 Phosphonates transport ATP-binding protein PhnK K05781 phnK; putative phosphonate transport system ATP-binding protein
D RAK1035_2283 Nitrous oxide reductase maturation protein NosD K07218 nosD; nitrous oxidase accessory protein
D RAK1035_0977 Hypothetical protein K07219 K07219; putative molybdopterin biosynthesis protein
D RAK1035_1520 Hemin transport protein HmuS K07225 hmuS; putative hemin transport protein
D RAK1035_1612 Iron-regulated protein A precursor K07231 K07231; putative iron-regulated protein
D RAK1035_0171 NnrS protein involved in response to NO K07234 K07234; uncharacterized protein involved in response to NO
D RAK1035_2280 Nitrous oxide reductase maturation protein, outer-membrane lipoprotein NosL K19342 nosL; copper chaperone NosL
B
B 09194 Poorly characterized
C 99996 General function prediction only
D RAK1035_3015 Colicin V production protein K03558 cvpA; membrane protein required for colicin V production
D RAK1035_0570 Paraquat-inducible protein B K06192 pqiB; paraquat-inducible protein B
D RAK1035_1692 Coenzyme PQQ synthesis protein B K06136 pqqB; pyrroloquinoline quinone biosynthesis protein B
D RAK1035_1690 Coenzyme PQQ synthesis protein D K06138 pqqD; pyrroloquinoline quinone biosynthesis protein D
D RAK1035_0691 Protein secretion chaperonin CsaA K06878 K06878; tRNA-binding protein
D RAK1035_2879 Hemoglobin-like protein HbO K06886 glbN; hemoglobin
D RAK1035_3427 Hypothetical protein K06886 glbN; hemoglobin
D RAK1035_2064 Ferredoxin reductase K07001 K07001; NTE family protein
D RAK1035_2275 Pyridoxal-5'-phosphate phosphatase, Alphaproteobacterial type K07025 K07025; putative hydrolase of the HAD superfamily
D RAK1035_3155 putative iron binding protein from the HesB_IscA_SufA family K15724 erpA; iron-sulfur cluster insertion protein
D RAK1035_3044 Iron-sulfur cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D RAK1035_3040 Iron-sulfur cluster assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD
D RAK1035_1041 FxsA protein K07113 fxsA; UPF0716 protein FxsA
D RAK1035_2898 Sulfur acceptor protein SufE for iron-sulfur cluster assembly K02426 sufE; cysteine desulfuration protein SufE
D RAK1035_0430 Rhodanese domain protein UPF0176, cyanobacterial/alphaproteobacterial subgroup K07146 K07146; UPF0176 protein
D RAK1035_4045 Inner membrane protein K02351 K02351; putative membrane protein
D RAK1035_0636 Protein SlyX K03745 slyX; SlyX protein
D RAK1035_0568 Paraquat-inducible protein A K03808 pqiA; paraquat-inducible protein A
D RAK1035_0569 Paraquat-inducible protein A K03808 pqiA; paraquat-inducible protein A
D RAK1035_3202 GTP-binding protein K08990 ycjF; putative membrane protein
D RAK1035_3635 Hydrogenase maturation factor HoxQ K03618 hyaF; hydrogenase-1 operon protein HyaF
D RAK1035_3636 Hydrogenase maturation factor HoxO/HyaE K03619 hyaE; hydrogenase-1 operon protein HyaE
D RAK1035_2554 Alkylphosphonate utilization operon protein PhnA K06193 phnA; protein PhnA
C 99997 Function unknown
D RAK1035_2205 Hydrolase, alpha/beta fold family K06889 K06889; uncharacterized protein
D RAK1035_2664 Membrane protein K06890 K06890; uncharacterized protein
D RAK1035_2194 YeeL K06893 K06893; uncharacterized protein
D RAK1035_3204 Amino acid regulated cytosolic protein K06918 K06918; uncharacterized protein
D RAK1035_3163 ATP-dependent protease subunit K06923 K06923; uncharacterized protein
D RAK1035_0523 CoA-binding domain protein K06929 K06929; uncharacterized protein
D RAK1035_0022 Hypothetical protein K06938 K06938; uncharacterized protein
D RAK1035_0476 ICC-like protein phosphoesterase K06953 K06953; uncharacterized protein
D RAK1035_3574 Amine oxidase, flavin-containing K06954 K06954; uncharacterized protein
D RAK1035_0499 putative deacylase K06987 K06987; uncharacterized protein
D RAK1035_0033 Ring-cleaving dioxygenase, putative K06991 K06991; uncharacterized protein
D RAK1035_1623 Hypothetical protein K06995 K06995; uncharacterized protein
D RAK1035_2976 Flavodoxin reductase (ferredoxin-NADPH reductase) family 1 K07006 K07006; uncharacterized protein
D RAK1035_3047 Alpha/beta hydrolase K07018 K07018; uncharacterized protein
D RAK1035_1287 Lactoylglutathione lyase K07032 K07032; uncharacterized protein
D RAK1035_0547 TRAP transporter solute receptor, TAXI family precursor K07080 K07080; uncharacterized protein
D RAK1035_1801 TRAP transporter solute receptor, TAXI family precursor K07080 K07080; uncharacterized protein
D RAK1035_3276 TRAP transporter solute receptor, TAXI family precursor K07080 K07080; uncharacterized protein
D RAK1035_0987 Transporter K07089 K07089; uncharacterized protein
D RAK1035_0275 Membrane protein, putative K07090 K07090; uncharacterized protein
D RAK1035_0674 INTEGRAL MEMBRANE PROTEIN (Rhomboid family) K07090 K07090; uncharacterized protein
D RAK1035_1144 Arginine/ornithine antiporter ArcD K07090 K07090; uncharacterized protein
D RAK1035_1329 Membrane protein, putative K07090 K07090; uncharacterized protein
D RAK1035_3669 Hypothetical protein K07090 K07090; uncharacterized protein
D RAK1035_1149 putative transmembrane protein K07112 K07112; uncharacterized protein
D RAK1035_1150 Gene II and X protein K07112 K07112; uncharacterized protein
D RAK1035_1152 Lipocalin-related protein and Bos/Can/Equ allergen K07112 K07112; uncharacterized protein
D RAK1035_3025 Hypothetical protein K07112 K07112; uncharacterized protein
D RAK1035_3127 Hypothetical protein K07120 K07120; uncharacterized protein
D RAK1035_0087 Hypothetical protein K07126 K07126; uncharacterized protein
D RAK1035_0394 Hypothetical protein K07126 K07126; uncharacterized protein
D RAK1035_2098 TPR repeat, SEL1 subfamily K07126 K07126; uncharacterized protein
D RAK1035_4127 Hypothetical protein K07133 K07133; uncharacterized protein
D RAK1035_3697 Hypothetical protein K07136 K07136; uncharacterized protein
D RAK1035_1356 MOSC domain protein K07140 K07140; MOSC domain-containing protein
D RAK1035_3475 Uncharacterized protein, similar to the N-terminal domain of Lon protease K07157 K07157; uncharacterized protein
D RAK1035_3396 Carbon monoxide dehydrogenase E protein K07161 K07161; uncharacterized protein
D RAK1035_3845 Carbon monoxide dehydrogenase E protein K07161 K07161; uncharacterized protein
D RAK1035_3116 Protein YidD K08998 K08998; uncharacterized protein
D RAK1035_2691 Exported protein K09005 K09005; uncharacterized protein
D RAK1035_2278 Transamidase GatB domain protein K09117 K09117; uncharacterized protein
D RAK1035_0469 Uncharacterized conserved protein YggU, UPF0235/DUF167 family (Function unknown) K09131 K09131; uncharacterized protein
D RAK1035_0443 Putative YcgN protein K09160 K09160; uncharacterized protein
D RAK1035_1411 Carbon monoxide dehydrogenase G protein K09386 K09386; uncharacterized protein
D RAK1035_3847 Carbon monoxide dehydrogenase G protein K09386 K09386; uncharacterized protein
D RAK1035_3573 Hypothetical protein K09701 K09701; uncharacterized protein
D RAK1035_1409 ElaA protein K09768 K09768; uncharacterized protein
D RAK1035_1078 YciL protein K09780 K09780; uncharacterized protein
D RAK1035_0743 Membrane protein, putative K09781 K09781; uncharacterized protein
D RAK1035_3474 Protein YcaR in KDO2-Lipid A K09791 K09791; uncharacterized protein
D RAK1035_0338 Hypothetical protein K09794 K09794; uncharacterized protein
D RAK1035_1363 putative transmembrane protein coupled to NADH-ubiquinone oxidoreductase chain 5-like protein K09822 K09822; uncharacterized protein
D RAK1035_0571 Hypothetical protein K09857 K09857; uncharacterized protein
D RAK1035_1342 UPF0246 protein YaaA K09861 K09861; uncharacterized protein
D RAK1035_1847 Hypothetical protein K09862 K09862; uncharacterized protein
D RAK1035_2122 Hypothetical protein K09919 K09919; uncharacterized protein
D RAK1035_0550 Hypothetical protein K09921 K09921; uncharacterized protein
D RAK1035_0025 Membrane protein, putative K09922 K09922; uncharacterized protein
D RAK1035_0285 Hypothetical protein K09928 K09928; uncharacterized protein
D RAK1035_0363 Hypothetical protein K09931 K09931; uncharacterized protein
D RAK1035_0240 Putative inner membrane protein YjeT (clustered with HflC) K09937 K09937; uncharacterized protein
D RAK1035_1616 Putative exported protein K09947 K09947; uncharacterized protein
D RAK1035_0710 Protein of unknown function DUF1244 K09948 K09948; uncharacterized protein
D RAK1035_2975 putative conserved protein, nuclear transport factor 2 (NTF2) superfamily (Function unknown) K09958 K09958; uncharacterized protein
D RAK1035_3521 Hypothetical protein K09966 K09966; uncharacterized protein
D RAK1035_0811 Hypothetical protein K09967 K09967; uncharacterized protein
D RAK1035_3621 Urea carboxylase-related aminomethyltransferase K09967 K09967; uncharacterized protein
D RAK1035_1571 Conserved hypothetical protein (perhaps related to histidine degradation) K09975 K09975; uncharacterized protein
D RAK1035_3464 Hypothetical protein K09981 K09981; uncharacterized protein
D RAK1035_2916 Hypothetical protein K09985 K09985; uncharacterized protein
D RAK1035_1744 Hypothetical protein K09987 K09987; uncharacterized protein
D RAK1035_3249 Hypothetical protein K09989 K09989; uncharacterized protein
D RAK1035_2956 DUF1022 domain-containing protein K07276 K07276; uncharacterized protein
D RAK1035_2963 DUF1022 domain-containing protein K07276 K07276; uncharacterized protein
D RAK1035_2967 DUF1022 domain-containing protein K07276 K07276; uncharacterized protein
D RAK1035_1615 Iron-regulated protein A precursor K07338 K07338; uncharacterized protein
D RAK1035_1303 putative nucleic-acid-binding protein implicated in transcription termination K07742 ylxR; uncharacterized protein
!
#
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 19, 2025