+D Messenger RNA Biogenesis KO #

  Prokaryotic Defense System - Rhodopseudomonas palustris BisB18

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ACRISPR-Cas system B Universal Cas proteins C RPC_4488 CRISPR-associated protein, Cas1 family K15342 cas1; CRISP-associated protein Cas1 C RPC_4487 CRISPR-associated protein, Cas2 family K09951 cas2; CRISPR-associated protein Cas2 B Type I CRISPR-Cas system C Type I signiture cas proteins C Subtype I-A factors C Subtype I-B factors C Subtype I-C factors C Subtype I-D factors C Subtype I-E factors C Subtype I-F factors C Subtype I-U factors B Type II CRISPR-Cas system C Type II signiture cas proteins D RPC_4489 CRISPR-associated endonuclease, Csn1 family K09952 csn1; CRISPR-associated endonuclease Csn1 [EC:3.1.-.-] C Subtype II-A factors C Subtype II-B factors B Type III CRISPR-Cas system C Type III signiture cas proteins C Subtype III-A factors C Subtype III-B factors C Subtype III-U factors # ARestriction and modification system (R-M system) B Type I R-M system C RPC_3651 type III restriction enzyme, res subunit K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] C RPC_3653 type I restriction enzyme StySPI specificity protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] C RPC_3652 N-6 DNA methylase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] B Type II R-M system C Restriction endonucleases C DNA methyltransferases D RPC_4366 DNA methylase N-4/N-6 K13581 ccrM; modification methylase [EC:2.1.1.72] D RPC_4309 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] B Type III R-M system B Type IV R-M system C RPC_2379 hypothetical protein K07448 mrr; restriction system protein # AToxin-antitoxin system (TA system) B Type I TA system C Hok-Sok C SymE-SymR C Ldr-Rdl C TisB-IstR C Ibs-Sib C ShoB-OhsC C RalR-RalA B Type II TA system C MazF-MazE D RPC_3250 transcriptional modulator of MazE/toxin, MazF K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D RPC_0586 transcriptional modulator of MazE/toxin, MazF K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D RPC_0821 transcriptional modulator of MazE/toxin, MazF K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D RPC_4772 transcriptional modulator of MazE/toxin, MazF K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D RPC_3251 transcriptional regulator/antitoxin, MazE K07172 mazE; antitoxin MazE C ChpB-ChpS C YhaV-PrlF D RPC_3694 transcriptional regulator, AbrB family K19156 prlF; antitoxin PrlF C RelE/StbE-RelB/StbD D RPC_3073 plasmid stabilization system K06218 relE; mRNA interferase RelE/StbE C YafQ-dinJ D RPC_1376 Addiction module toxin, RelE/StbE K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-] D RPC_1377 RelB antitoxin K07473 dinJ; DNA-damage-inducible protein J C YoeB-YefM D RPC_0027 Addiction module toxin, Txe/YoeB K19158 yoeB; toxin YoeB [EC:3.1.-.-] D RPC_0028 Prevent-host-death protein K19159 yefM; antitoxin YefM C HipA-HipB D RPC_4145 HipA-like K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] C HicA-HicB D RPC_3983 protein of unknown function UPF0150 K18843 hicB; antitoxin HicB D RPC_3281 protein of unknown function UPF0150 K18843 hicB; antitoxin HicB C YafO-YafN C Hha-TomB C PspC-PspB C CcdB-CcdA C ParE-ParD D RPC_0159 plasmid stabilization system K19092 parE1_3_4; toxin ParE1/3/4 D RPC_2216 plasmid stabilization system K19092 parE1_3_4; toxin ParE1/3/4 D RPC_1531 plasmid stabilization system K19092 parE1_3_4; toxin ParE1/3/4 D RPC_4130 plasmid stabilization system K19092 parE1_3_4; toxin ParE1/3/4 D RPC_4802 Addiction module toxin, RelE/StbE K19092 parE1_3_4; toxin ParE1/3/4 D RPC_0160 putative transcriptional regulators, CopG/Arc/MetJ DNA-binding domain K07746 parD1_3_4; antitoxin ParD1/3/4 D RPC_2215 putative transcriptional regulators, CopG/Arc/MetJ DNA-binding domain K07746 parD1_3_4; antitoxin ParD1/3/4 C Doc-Phd D RPC_3971 Death-on-curing protein K07341 doc; death on curing protein D RPC_3345 Prevent-host-death protein K19165 phd; antitoxin Phd C HigB-HigA D RPC_0232 putative membrane protein K19166 higB; mRNA interferase HigB [EC:3.1.-.-] D RPC_4241 conserved hypothetical protein K19166 higB; mRNA interferase HigB [EC:3.1.-.-] D RPC_4746 plasmid maintenance system killer K07334 higB-1; toxin HigB-1 D RPC_1257 plasmid maintenance system killer K07334 higB-1; toxin HigB-1 D RPC_4140 plasmid maintenance system killer K07334 higB-1; toxin HigB-1 D RPC_4369 plasmid maintenance system killer K07334 higB-1; toxin HigB-1 D RPC_4755 plasmid maintenance system killer K07334 higB-1; toxin HigB-1 D RPC_2830 plasmid maintenance system killer K07334 higB-1; toxin HigB-1 D RPC_3186 plasmid maintenance system killer K07334 higB-1; toxin HigB-1 D RPC_4242 transcriptional regulator, XRE family K18831 higA; HTH-type transcriptional regulator / antitoxin HigA D RPC_0231 transcriptional regulator K18831 higA; HTH-type transcriptional regulator / antitoxin HigA D RPC_1256 plasmid maintenance system antidote protein, XRE family K21498 higA-1; antitoxin HigA-1 D RPC_4745 putative plasmid maintenance system antidote protein, XRE family K21498 higA-1; antitoxin HigA-1 D RPC_4370 plasmid maintenance system antidote protein, XRE family K21498 higA-1; antitoxin HigA-1 D RPC_3187 plasmid maintenance system antidote protein, XRE family K21498 higA-1; antitoxin HigA-1 D RPC_4141 plasmid maintenance system antidote protein, XRE family K21498 higA-1; antitoxin HigA-1 D RPC_2829 plasmid maintenance system antidote protein, XRE family K21498 higA-1; antitoxin HigA-1 D RPC_4756 putative plasmid maintenance system antidote protein, XRE family K21498 higA-1; antitoxin HigA-1 C MqsR-MqsA C VapC-VapB D RPC_1578 virulence-associated protein K18829 mvpT; antitoxin VapB D RPC_1344 PilT protein-like K19686 vapC; ribonuclease VapC [EC:3.1.-.-] D RPC_3944 PilT protein K19686 vapC; ribonuclease VapC [EC:3.1.-.-] D RPC_1343 Rv0623-like transcription factor K19687 vapB; antitoxin VapB D RPC_3943 Rv0623-like transcription factor K19687 vapB; antitoxin VapB C PezT-PezA C YobL-YobK C YokI-YokJ C YqcG-YqcF C YxiD-YxxD C FitB-FitA D RPC_0805 PilT protein-like K07062 fitB; toxin FitB [EC:3.1.-.-] D RPC_2934 PilT protein-like K07062 fitB; toxin FitB [EC:3.1.-.-] D RPC_3346 PilT protein-like K07062 fitB; toxin FitB [EC:3.1.-.-] D RPC_4151 PilT protein-like K07062 fitB; toxin FitB [EC:3.1.-.-] D RPC_0804 hypothetical protein K21495 fitA; antitoxin FitA D RPC_4150 conserved hypothetical protein K21495 fitA; antitoxin FitA C BC_0920-BC_0921 C Type II TA system related factors D RPC_3298 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D RPC_2644 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D RPC_2827 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D RPC_2451 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] B Type III TA system C AbiQ system B Type IV TA system C YeeV-YeeU C CptA-CptB D RPC_2609 protein of unknown function DUF339 K09159 cptB; antitoxin CptB B Type V TA system C GhoT-GhoS # ADNA phosphothiolation system B Sulfur modification proteins C RPC_4451 aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C RPC_2842 aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7] B DNA phosphorothioation-dependent restriction proteins ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: November 7, 2023