+E	Messenger RNA Biogenesis	KO
#<h2><a href="/kegg/brite.html"><img src="/Fig/bget/kegg3.gif" align="middle" border=0></a>&nbsp; Messenger RNA Biogenesis - Ruditapes philippinarum (Manila clam)</h2>
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A<b>Eukaryotic type</b>
B  mRNA processing factors
C    5' end processing
D      Capping factors
E        132752849 mRNA cap guanine-N7 methyltransferase-like	K00565 RNMT; mRNA (guanine-N7-)-methyltransferase [EC:2.1.1.56] 
E        132748005 mRNA-capping enzyme-like	K13917 RNGTT; mRNA-capping enzyme [EC:2.7.7.50 3.6.1.74] 
E        132724977 mRNA-capping enzyme-like isoform X1	K13917 RNGTT; mRNA-capping enzyme [EC:2.7.7.50 3.6.1.74] 
E        132734745 ovarian-specific serine/threonine-protein kinase Lok-like	K04563 CDC28; cyclin-dependent kinase [EC:2.7.11.22] 
E        132731757 cyclin-dependent kinase 7-like isoform X1	K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23] 
E        132715100 cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1-like isoform X1	K14589 CMTR1; cap1 methyltransferase [EC:2.1.1.57] 
E        132719928 cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 2-like	K14590 CMTR2; cap2 methyltransferase [EC:2.1.1.296] 
E        132727036 cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 2-like	K14590 CMTR2; cap2 methyltransferase [EC:2.1.1.296] 
E        132737093 U1 small nuclear ribonucleoprotein 70 kDa-like	K18708 FAM103A1; RNMT-activating mini protein 
D      Cap binding complex
E        132753882 nuclear cap-binding protein subunit 1-like isoform X1	K12882 NCBP1; nuclear cap-binding protein subunit 1 
E        132732496 nuclear cap-binding protein subunit 1-like isoform X1	K12882 NCBP1; nuclear cap-binding protein subunit 1 
E        132731895 nuclear cap-binding protein subunit 2-like	K12883 NCBP2; nuclear cap-binding protein subunit 2 
C    3' end processing
D      Pre-mRNA cleavage factor Im (CFIm)
E        132760228 cleavage and polyadenylation specificity factor subunit 5-like	K14397 NUDT21; cleavage and polyadenylation specificity factor subunit 5 
E        132745827 cleavage and polyadenylation specificity factor subunit 6-like isoform X1	K14398 CPSF6_7; cleavage and polyadenylation specificity factor subunit 6/7 
D      Pre-mRNA cleavage factor IIm (CFIIm)
E        132734737 polyribonucleotide 5'-hydroxyl-kinase Clp1-like	K14399 CLP1; polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78] 
E        132714446 polyribonucleotide 5'-hydroxyl-kinase Clp1-like	K14399 CLP1; polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78] 
D      Cleavage and polyadenylation specificity factor (CPSF) complex
E        132742543 cleavage and polyadenylation specificity factor subunit 1-like	K14401 CPSF1; cleavage and polyadenylation specificity factor subunit 1 
E        132746513 cleavage and polyadenylation specificity factor subunit 2-like	K14402 CPSF2; cleavage and polyadenylation specificity factor subunit 2 
E        132758854 cleavage and polyadenylation specificity factor subunit 3-like	K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-] 
E        132737909 cleavage and polyadenylation specificity factor subunit 4-like isoform X1	K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4 
E        132744545 cleavage and polyadenylation specificity factor subunit 4-like	K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4 
E        132716054 pre-mRNA 3' end processing protein WDR33-like	K15542 PFS2; polyadenylation factor subunit 2 
E        132723314 LOW QUALITY PROTEIN: WD repeat-containing protein 82-like	K14962 WDR82; COMPASS component SWD2 
E        132758497 WD repeat-containing protein 82-like	K14962 WDR82; COMPASS component SWD2 
E        132724180 uncharacterized protein LOC132724180	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        132753348 serine/threonine-protein phosphatase alpha-2 isoform	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        132758609 serine/threonine-protein phosphatase PP1-beta catalytic subunit isoform X1	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        132758610 serine/threonine-protein phosphatase alpha-2 isoform-like	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        132716055 RNA polymerase II subunit A C-terminal domain phosphatase SSU72-like	K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16] 
D      Cleavage stimulation factor (CSTF) complex
E        132725437 cleavage stimulation factor subunit 1-like	K14406 CSTF1; cleavage stimulation factor subunit 1 
E        132752114 cleavage stimulation factor subunit 2-like	K14407 CSTF2; cleavage stimulation factor subunit 2 
E        132741857 cleavage stimulation factor subunit 2-like	K14407 CSTF2; cleavage stimulation factor subunit 2 
E        132726720 LOW QUALITY PROTEIN: cleavage stimulation factor subunit 3-like	K14408 CSTF3; cleavage stimulation factor subunit 3 
E        132759349 cleavage stimulation factor subunit 3-like	K14408 CSTF3; cleavage stimulation factor subunit 3 
E        132719895 symplekin-like isoform X1	K06100 SYMPK; symplekin 
D      U7-dependent histone pre-mRNA processing factors
E        132723953 small nuclear ribonucleoprotein Sm D3-like	K11088 SNRPD3; small nuclear ribonucleoprotein D3 
E        132723524 small nuclear ribonucleoprotein E-like	K11097 SNRPE; small nuclear ribonucleoprotein E 
E        132736940 small nuclear ribonucleoprotein F-like	K11098 SNRPF; small nuclear ribonucleoprotein F 
E        132751249 small nuclear ribonucleoprotein F	K11098 SNRPF; small nuclear ribonucleoprotein F 
E        132713291 probable small nuclear ribonucleoprotein G	K11099 SNRPG; small nuclear ribonucleoprotein G 
E        132724268 U7 snRNA-associated Sm-like protein LSm11 isoform X1	K25592 LSM11; U7 snRNA-associated Sm-like protein LSm11 
E        132746513 cleavage and polyadenylation specificity factor subunit 2-like	K14402 CPSF2; cleavage and polyadenylation specificity factor subunit 2 
E        132758854 cleavage and polyadenylation specificity factor subunit 3-like	K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-] 
E        132752114 cleavage stimulation factor subunit 2-like	K14407 CSTF2; cleavage stimulation factor subunit 2 
E        132741857 cleavage stimulation factor subunit 2-like	K14407 CSTF2; cleavage stimulation factor subunit 2 
E        132719895 symplekin-like isoform X1	K06100 SYMPK; symplekin 
E        132725785 histone RNA hairpin-binding protein-like	K18710 SLBP; histone RNA hairpin-binding protein 
D      DRB sensitivity inducing factor (DSIF) complex
E        132717360 transcription elongation factor SPT4-like	K15171 SUPT4H1; transcription elongation factor SPT4 
E        132731742 transcription elongation factor SPT5-like	K15172 SUPT5H; transcription elongation factor SPT5 
D      N6-methyltransferase complex
E        132751102 N6-adenosine-methyltransferase catalytic subunit-like	K05925 METTL3; mRNA m6A methyltransferase catalytic subunit [EC:2.1.1.348] 
E        132732390 N6-adenosine-methyltransferase catalytic subunit-like	K05925 METTL3; mRNA m6A methyltransferase catalytic subunit [EC:2.1.1.348] 
E        132734820 N6-adenosine-methyltransferase non-catalytic subunit-like	K23960 METTL14; mRNA m6A methyltransferase non-catalytic subunit 
E        132758138 N(6)-adenine-specific methyltransferase METTL4-like	K24174 METTL4; N(6)-adenine-specific DNA methyltransferase [EC:2.1.1.72] 
E        132736299 RNA N6-adenosine-methyltransferase mettl16-like	K11393 METTL16; U6 snRNA m6A methyltransferase [EC:2.1.1.346] 
E        132735098 pre-mRNA-splicing regulator WTAP-like	K22824 WTAP; pre-mRNA-splicing regulator WTAP 
E        132735310 protein virilizer homolog	K22910 VIRMA; protein virilizer 
D      Poly(A) addition factors
E        132731942 poly(A) polymerase beta-like isoform X1	K14376 PAP; poly(A) polymerase [EC:2.7.7.19] 
E        132736519 poly(A) RNA polymerase GLD2-A-like	K14079 PAPD4; poly(A) RNA polymerase GLD2 [EC:2.7.7.19] 
D      Negative regulators of mRNA 3' end processing
E        132751671 BRCA1-associated RING domain protein 1-like isoform X1	K10683 BARD1; BRCA1-associated RING domain protein 1 
E        132756761 RNA demethylase ALKBH5-like	K10767 ALKBH5; mRNA N6-methyladenine demethylase [EC:1.14.11.53] 
E        132748699 TAR DNA-binding protein 43-like	K23600 TARDBP; TAR DNA-binding protein 43 
E        132757717 TAR DNA-binding protein 43-like	K23600 TARDBP; TAR DNA-binding protein 43 
E        132732315 TAR DNA-binding protein 43-like	K23600 TARDBP; TAR DNA-binding protein 43 
C    Other processing factors
D      132742059 DNA/RNA-binding protein KIN17-like	K13102 KIN; DNA/RNA-binding protein KIN17 
D      132731167 uncharacterized protein LOC132731167	K23040 METTL22; methyltransferase-like protein 22 [EC:2.1.1.-] 
D      132745775 uncharacterized protein LOC132745775	K23040 METTL22; methyltransferase-like protein 22 [EC:2.1.1.-] 
D      132728572 terminal nucleotidyltransferase 5C-like	K23034 TENT5C; terminal nucleotidyltransferase 5C [EC:2.7.7.19] 
D      132716159 serrate RNA effector molecule homolog	K27103 SRRT; serrate RNA effector molecule 
B  mRNA surveillance and transport factors
C    Transport factors
D      EJC complex
E        132754605 RNA-binding protein 8A-like	K12876 RBM8A; RNA-binding protein 8A 
E        132747280 protein mago nashi homolog 2	K12877 MAGOH; protein mago nashi 
E        132714079 THO complex subunit 4-like	K12881 THOC4; THO complex subunit 4 
E        132753691 spliceosome RNA helicase DDX39B	K12812 DDX39B; ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7] 
E        132715067 eukaryotic initiation factor 4A-III	K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7] 
E        132743674 coiled-coil domain-containing protein 174-like	K25178 CCDC174; coiled-coil domain-containing protein 174 
E        132727308 histone deacetylase complex subunit SAP18-like	K14324 SAP18; histone deacetylase complex subunit SAP18 
E        132719886 RNA-binding protein with serine-rich domain 1-like	K14325 RNPS1; RNA-binding protein with serine-rich domain 1 
D      TREX complex
E        132737718 THO complex subunit 1-like	K12878 THOC1; THO complex subunit 1 
E        132730442 THO complex subunit 2-like isoform X1	K12879 THOC2; THO complex subunit 2 
E        132725718 THO complex subunit 3-like	K12880 THOC3; THO complex subunit 3 
E        132714079 THO complex subunit 4-like	K12881 THOC4; THO complex subunit 4 
E        132715521 THO complex subunit 5 homolog	K13174 THOC5; THO complex subunit 5 
E        132732262 THO complex subunit 6 homolog	K13175 THOC6; THO complex subunit 6 
E        132729839 THO complex subunit 7 homolog	K13176 THOC7; THO complex subunit 7 
E        132759484 THO complex subunit 7 homolog	K13176 THOC7; THO complex subunit 7 
D      TREX-2 complex
E        132734470 PCI domain-containing protein 2-like	K23801 PCID2; nuclear mRNA export protein PCID2/THP1 
E        132749841 PCI domain-containing protein 2-like	K23801 PCID2; nuclear mRNA export protein PCID2/THP1 
E        132725396 26S proteasome complex subunit SEM1-like	K10881 SHFM1; 26 proteasome complex subunit DSS1 
E        132726821 transcription and mRNA export factor ENY2	K11368 ENY2; enhancer of yellow 2 transcription factor 
E        132722870 uncharacterized protein LOC132722870	K10840 CETN2; centrin-2 
E        132756041 uncharacterized protein LOC132756041	K10840 CETN2; centrin-2 
E        132723925 centrin-3-like	K16466 CETN3; centrin-3 
E        132730987 centrin-1-like	K16466 CETN3; centrin-3 
E        132731830 germinal-center associated nuclear protein-like	K24317 MCM3AP; germinal-center associated nuclear protein [EC:2.3.1.48] 
D      Nuclear pore complex
E        132714496 nucleoprotein TPR-like	K09291 TPR; nucleoprotein TPR 
E        132732423 mRNA export factor RAE1-like	K14298 RAE1; mRNA export factor 
E        132716500 protein SEC13 homolog	K14004 SEC13; protein transport protein SEC13 
E        132736070 nucleoporin Nup37-like	K14302 NUP37; nuclear pore complex protein Nup37 
E        132724486 nucleoporin Nup37-like	K14302 NUP37; nuclear pore complex protein Nup37 
E        132755043 nuclear pore complex protein Nup85-like	K14304 NUP85; nuclear pore complex protein Nup85 
E        132723841 nucleoporin Nup43-like	K14305 NUP43; nuclear pore complex protein Nup43 
E        132724579 nucleoporin Nup43-like	K14305 NUP43; nuclear pore complex protein Nup43 
E        132717042 nuclear pore complex protein Nup50-like	K14295 NUP50; nuclear pore complex protein Nup50 
E        132737471 LOW QUALITY PROTEIN: nuclear pore complex protein Nup54-like	K14308 NUP54; nuclear pore complex protein Nup54 
E        132723318 nuclear pore glycoprotein p62-like isoform X1	K14306 NUP62; nuclear pore complex protein Nup62 
E        132749090 nucleoporin 88-like	K14318 NUP88; nuclear pore complex protein Nup88 
E        132714442 nuclear pore complex protein Nup93-like	K14309 NUP93; nuclear pore complex protein Nup93 
E        132717994 nuclear pore complex protein Nup98-Nup96-like	K14297 NUP98; nuclear pore complex protein Nup98-Nup96 
E        132736385 LOW QUALITY PROTEIN: nuclear pore complex protein Nup107-like	K14301 NUP107; nuclear pore complex protein Nup107 
E        132755105 nuclear pore complex protein Nup107-like	K14301 NUP107; nuclear pore complex protein Nup107 
E        132743449 LOW QUALITY PROTEIN: nuclear pore complex protein Nup133-like	K14300 NUP133; nuclear pore complex protein Nup133 
E        132737560 nucleoporin NUP188-like	K14311 NUP188; nuclear pore complex protein Nup188 
E        132750991 nuclear pore complex protein Nup155-like	K14312 NUP155; nuclear pore complex protein Nup155 
E        132714790 nuclear pore complex protein Nup160-like	K14303 NUP160; nuclear pore complex protein Nup160 
E        132734093 nucleoporin NUP35-like	K14313 NUP35; nuclear pore complex protein Nup53 
E        132729634 nuclear pore complex protein Nup205-like	K14310 NUP205; nuclear pore complex protein Nup205 
E        132759255 nuclear pore complex protein Nup205-like	K14310 NUP205; nuclear pore complex protein Nup205 
E        132745759 nuclear pore membrane glycoprotein 210-like	K14314 NUP210; nuclear pore complex protein Nup210 
E        132715381 nucleoporin p58/p45-like	K14307 NUPL1; nucleoporin p58/p45 
E        132757363 nucleoporin NUP42-like	K14321 NUPL2; nucleoporin-like protein 2 
E        132714181 nucleoporin NDC1-like	K14315 NDC1; nucleoporin NDC1 
E        132717698 nucleoporin SEH1-like isoform X1	K14299 SEH1; nucleoporin SEH1 
E        132720156 aladin-like	K14320 AAAS; aladin 
E        132723381 LOW QUALITY PROTEIN: aladin-like	K14320 AAAS; aladin 
E        132723925 centrin-3-like	K16466 CETN3; centrin-3 
E        132730987 centrin-1-like	K16466 CETN3; centrin-3 
E        132715296 mRNA export factor GLE1-like	K18723 GLE1; nucleoporin GLE1 
E        132721883 nuclear RNA export factor 1-like	K14284 NXF; nuclear RNA export factor 
E        132752151 NTF2-related export protein 2-like isoform X1	K14285 NXT1_2; NTF2-related export protein 1/2 
E        132715389 NTF2-related export protein 2-like isoform X1	K14285 NXT1_2; NTF2-related export protein 1/2 
D      Ran-mediated transport factors
E        132714209 GTP-binding nuclear protein Ran	K07936 RAN; GTP-binding nuclear protein Ran 
E        132718244 GTP-binding nuclear protein Ran	K07936 RAN; GTP-binding nuclear protein Ran 
E        132735222 acidic leucine-rich nuclear phosphoprotein 32 family member A-like	K18646 ANP32A_C_D; acidic leucine-rich nuclear phosphoprotein 32 family member A/C/D 
E        132758171 ELAV-like protein 1-B	K13088 ELAVL1; ELAV-like protein 1 
E        132734307 ELAV-like protein 3 isoform X1	K13208 ELAVL2_3_4; ELAV like protein 2/3/4 
E        132758169 ELAV-like protein 1-B isoform X1	K13208 ELAVL2_3_4; ELAV like protein 2/3/4 
E        132736262 FAS-associated factor 2-like isoform X1	K18726 FAF2; FAS-associated factor 2 
E        132743610 transitional endoplasmic reticulum ATPase isoform X1	K13525 VCP; transitional endoplasmic reticulum ATPase 
E        132733948 protein N-lysine methyltransferase METTL21D-like	K21806 VCPKMT; protein N-lysine methyltransferase METTL21D [EC:2.1.1.-] 
E        132748736 protein N-lysine methyltransferase METTL21D-like	K21806 VCPKMT; protein N-lysine methyltransferase METTL21D [EC:2.1.1.-] 
E        132720747 exportin-1-like isoform X1	K14290 XPO1; exportin-1 
E        132757370 exportin-7-like	K18460 XPO7; exportin-7 
E        132738502 ran GTPase-activating protein 1-like	K14319 RANGAP1; Ran GTPase-activating protein 1 
E        132753771 ran GTPase-activating protein 1-like	K14319 RANGAP1; Ran GTPase-activating protein 1 
E        132731686 RNA-binding protein cabeza-like	K14651 TAF15; transcription initiation factor TFIID subunit 15 
D      eIF4F and regulatory proteins
E        132730656 eukaryotic translation initiation factor 4E type 2-like	K03259 EIF4E; translation initiation factor 4E 
E        132731717 eukaryotic translation initiation factor 4E-like	K03259 EIF4E; translation initiation factor 4E 
E        132736667 eukaryotic initiation factor 4A-I-like	K03257 EIF4A; translation initiation factor 4A 
E        132739421 uncharacterized protein LOC132739421	K03257 EIF4A; translation initiation factor 4A 
E        132740603 eukaryotic translation initiation factor 4 gamma 1-like	K03260 EIF4G; translation initiation factor 4G 
E        132730738 eukaryotic translation initiation factor 4 gamma 2-like	K03260 EIF4G; translation initiation factor 4G 
E        132732338 eukaryotic translation initiation factor 4B-like isoform X1	K03258 EIF4B; translation initiation factor 4B 
E        132731558 eukaryotic translation initiation factor 4H-like	K24086 EIF4H; translation initiation factor 4H 
E        132729674 eukaryotic translation initiation factor 4E-binding protein 1-like	K07205 EIF4EBP1; eukaryotic translation initiation factor 4E binding protein 1 
E        132719710 protein angel homolog 2-like	K18729 ANGEL; protein angel 
E        132735870 RNA-binding protein FXR1-like isoform X1	K15516 FMR; fragile X mental retardation protein 
E        132747547 cytoplasmic FMR1-interacting protein-like isoform X1	K05749 CYFIP; cytoplasmic FMR1 interacting protein 
E        132747548 cytoplasmic FMR1-interacting protein-like isoform X1	K05749 CYFIP; cytoplasmic FMR1 interacting protein 
E        132749396 cytoplasmic polyadenylation element-binding protein 1-like	K02602 CPEB; cytoplasmic polyadenylation element-binding protein 
E        132756240 cytoplasmic polyadenylation element-binding protein 2-like isoform X1	K02602 CPEB; cytoplasmic polyadenylation element-binding protein 
E        132744308 ATP-dependent RNA helicase DDX3Y-like isoform X1	K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7] 
E        132736716 GRB10-interacting GYF protein 2-like	K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein 
E        132744958 polyadenylate-binding protein 1A-like	K13126 PABPC; polyadenylate-binding protein 
E        132754247 polyadenylate-binding protein-interacting protein 1-like	K14322 PAIP1; polyadenylate-binding protein-interacting protein 1 
E        132754256 polyadenylate-binding protein-interacting protein 1-like	K14322 PAIP1; polyadenylate-binding protein-interacting protein 1 
E        132739732 superkiller complex protein 2-like	K12599 SKI2; antiviral helicase SKI2 [EC:5.6.2.6] 
E        132759528 deformed epidermal autoregulatory factor 1 homolog	K23041 DEAF1; deformed epidermal autoregulatory factor 1 
E        132733572 malignant T-cell-amplified sequence 1-like	K07575 MCTS; malignant T-cell-amplified sequence 
E        132721371 density-regulated protein homolog isoform X1	K24272 DENR; density-regulated protein 
D      APOBEC1-ACF complex
E        132716615 APOBEC1 complementation factor-like	K24978 A1CF; APOBEC1 complementation factor 
D      Other transport factors
E        132719859 partner of Y14 and mago-like	K14294 WIBG; partner of Y14 and mago 
E        132748898 heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog	K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
E        132739966 heterogeneous nuclear ribonucleoprotein A1-like	K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
E        132757688 RNA-binding protein Musashi homolog 2-like isoform X1	K14411 MSI; RNA-binding protein Musashi 
E        132746833 heterogeneous nuclear ribonucleoprotein A2 homolog 1-like isoform X1	K14411 MSI; RNA-binding protein Musashi 
E        132738239 DAZ-associated protein 1-like isoform X1	K14411 MSI; RNA-binding protein Musashi 
E        132718794 protein pelota-like	K06965 PELO; protein pelota 
E        132752937 polyadenylate-binding protein 2-B-like	K14396 PABPN1; polyadenylate-binding protein 2 
E        132740169 ATP-dependent RNA helicase DDX19A-like	K18655 DDX19; ATP-dependent RNA helicase DDX19/DBP5 [EC:5.6.2.7] 
E        132759290 pre-mRNA-splicing factor SYF1-like	K12867 SYF1; pre-mRNA-splicing factor SYF1 
E        132747891 SAP domain-containing ribonucleoprotein-like isoform X1	K18732 SARNP; SAP domain-containing ribonucleoprotein 
E        132748759 regulator of chromosome condensation-like isoform X1	K11493 RCC1; regulator of chromosome condensation 
E        132718462 regulator of chromosome condensation-like isoform X1	K11493 RCC1; regulator of chromosome condensation 
E        132733068 la-related protein 6-like	K18733 LARP6; la-related protein 6 
E        132750757 LOW QUALITY PROTEIN: la-related protein 6-like	K18733 LARP6; la-related protein 6 
E        132738811 transcriptional activator protein Pur-beta-like isoform X1	K21772 PURA; transcriptional activator protein Pur-alpha 
E        132746752 leukocyte receptor cluster member 8 homolog isoform X1	K23802 LENG8; SAC3 family protein LENG8/THP3 
C    Surveillance factors
D      Surveillance complex
E        132741342 eukaryotic peptide chain release factor subunit 1	K03265 ETF1; peptide chain release factor subunit 1 
E        132746978 eukaryotic peptide chain release factor GTP-binding subunit ERF3A-like	K03267 ERF3; peptide chain release factor subunit 3 
E        132722569 regulator of nonsense transcripts 1-like	K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3] 
E        132753914 regulator of nonsense transcripts 2-like	K14327 UPF2; regulator of nonsense transcripts 2 
E        132718274 regulator of nonsense transcripts 3B-like	K14328 UPF3; regulator of nonsense transcripts 3 
D      Protein phosphatase 2A
E        132734808 serine/threonine-protein phosphatase 2A catalytic subunit beta isoform-like	K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16] 
E        132715794 serine/threonine-protein phosphatase 2A catalytic subunit beta isoform	K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16] 
E        132713339 serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform-like isoform X1	K03456 PPP2R1; serine/threonine-protein phosphatase 2A regulatory subunit A 
E        132728733 serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform-like isoform X1	K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B 
E        132739417 serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta-like isoform X1	K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B'' 
E        132739432 serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma-like isoform X1	K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B'' 
E        132718330 serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta-like	K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B'' 
E        132740242 serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform-like	K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B' 
E        132729560 serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit gamma isoform-like isoform X1	K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B' 
D      Other surveillance factors
E        132746503 LOW QUALITY PROTEIN: serine/threonine-protein kinase SMG1-like	K08873 SMG1; serine/threonine-protein kinase SMG1 [EC:2.7.11.1] 
E        132733236 nonsense-mediated mRNA decay factor SMG5-like	K11125 SMG5; protein SMG5 
E        132719019 telomerase-binding protein EST1A-like	K11124 SMG6; protein SMG6 [EC:3.1.-.-] 
E        132743092 nonsense-mediated mRNA decay factor SMG7-like	K14409 SMG7; protein SMG7 
E        132730672 nonsense-mediated mRNA decay factor SMG7-like	K14409 SMG7; protein SMG7 
E        132740503 nonsense-mediated mRNA decay factor SMG8-like isoform X1	K18734 SMG8; protein SMG8 
E        132746660 nonsense-mediated mRNA decay factor SMG8-like isoform X1	K18734 SMG8; protein SMG8 
E        132758252 nonsense-mediated mRNA decay factor SMG9-like	K18735 SMG9; protein SMG9 
E        132736716 GRB10-interacting GYF protein 2-like	K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein 
E        132729788 probable ATP-dependent RNA helicase DHX34	K20101 DHX34; ATP-dependent RNA helicase DHX34 [EC:5.6.2.6] 
E        132716251 probable ATP-dependent RNA helicase DHX34	K20101 DHX34; ATP-dependent RNA helicase DHX34 [EC:5.6.2.6] 
E        132729676 GTP-binding protein 1-like	K24887 GTPBP1; GTP-binding protein 1 
C    Factors involved in mRNA localization
D      Cargo complex
E        132732768 pumilio homolog 3-like	K14844 PUF6; pumilio homology domain family member 6 
E        132731005 unconventional myosin-Va-like isoform X1	K10357 MYO5; myosin V 
E        132742761 protein bicaudal D-like isoform X1	K18739 BICD; protein bicaudal D 
D      Factors that have mRNA localization signals
E        132733594 actin, clone 302-like	K05692 ACTB_G1; actin beta/gamma 1 
E        132733597 actin, cytoplasmic-like	K05692 ACTB_G1; actin beta/gamma 1 
E        132733605 actin, cytoplasmic-like	K05692 ACTB_G1; actin beta/gamma 1 
E        132733610 actin-5-like	K05692 ACTB_G1; actin beta/gamma 1 
E        132733611 actin-5-like	K05692 ACTB_G1; actin beta/gamma 1 
E        132733614 actin, cytoplasmic-like	K05692 ACTB_G1; actin beta/gamma 1 
E        132734781 actin-1-like	K05692 ACTB_G1; actin beta/gamma 1 
E        132744407 actin, adductor muscle	K05692 ACTB_G1; actin beta/gamma 1 
E        132746293 actin, cytoskeletal 3-like	K05692 ACTB_G1; actin beta/gamma 1 
D      Trans-acting binding proteins
E        132727612 far upstream element-binding protein 1-like isoform X1	K13210 FUBP; far upstream element-binding protein 
E        132712989 elongation factor 1-alpha isoform X1	K03231 EEF1A; elongation factor 1-alpha 
E        132713582 elongation factor 1-alpha-like	K03231 EEF1A; elongation factor 1-alpha 
E        132713584 elongation factor 1-alpha-like	K03231 EEF1A; elongation factor 1-alpha 
E        132713585 elongation factor 1-alpha-like	K03231 EEF1A; elongation factor 1-alpha 
E        132716770 elongation factor 1-alpha-like	K03231 EEF1A; elongation factor 1-alpha 
E        132714237 elongation factor 1-gamma-like	K03233 EEF1G; elongation factor 1-gamma 
E        132743285 heterogeneous nuclear ribonucleoprotein A1-like	K13158 HNRNPA2B1; heterogeneous nuclear ribonucleoprotein A2/B1 
E        132731588 arf-GAP domain and FG repeat-containing protein 1-like isoform X1	K15044 AGFG1; Arf-GAP domain and FG repeats-containing protein 1 
E        132723046 double-stranded RNA-binding protein Staufen homolog	K17597 STAU; double-stranded RNA-binding protein Staufen 
E        132757494 double-stranded RNA-binding protein Staufen homolog isoform X1	K17597 STAU; double-stranded RNA-binding protein Staufen 
E        132749396 cytoplasmic polyadenylation element-binding protein 1-like	K02602 CPEB; cytoplasmic polyadenylation element-binding protein 
E        132756240 cytoplasmic polyadenylation element-binding protein 2-like isoform X1	K02602 CPEB; cytoplasmic polyadenylation element-binding protein 
D      Other mRNA localization factors
E        132735870 RNA-binding protein FXR1-like isoform X1	K15516 FMR; fragile X mental retardation protein 
E        132747547 cytoplasmic FMR1-interacting protein-like isoform X1	K05749 CYFIP; cytoplasmic FMR1 interacting protein 
E        132747548 cytoplasmic FMR1-interacting protein-like isoform X1	K05749 CYFIP; cytoplasmic FMR1 interacting protein 
E        132735586 poly(rC)-binding protein 3-like isoform X1	K21444 PCBP3_4; poly(rC)-binding protein 3/4 
E        132734595 caprin-1-like	K18743 CAPRIN1; caprin-1 
E        132721810 Y-box factor homolog	K09276 YBX1; Y-box-binding protein 1 
C    mRNA cycle factors
D      Common to processing body (P body) and stress granule
E        132721509 LOW QUALITY PROTEIN: 5'-3' exoribonuclease 1-like	K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-] 
E        132724356 LOW QUALITY PROTEIN: protein argonaute-2-like	K11593 ELF2C; eukaryotic translation initiation factor 2C 
E        132730656 eukaryotic translation initiation factor 4E type 2-like	K03259 EIF4E; translation initiation factor 4E 
E        132731717 eukaryotic translation initiation factor 4E-like	K03259 EIF4E; translation initiation factor 4E 
E        132722569 regulator of nonsense transcripts 1-like	K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3] 
E        132744308 ATP-dependent RNA helicase DDX3Y-like isoform X1	K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7] 
E        132746410 ATP-dependent RNA helicase me31b-like	K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7] 
E        132759616 LOW QUALITY PROTEIN: RNA-binding protein MEX3B-like	K15686 MEX3; RNA-binding protein MEX3 [EC:2.3.2.27] 
E        132749825 protein LSM14 homolog A-like isoform X1	K18749 LSM14; protein LSM14 
E        132721810 Y-box factor homolog	K09276 YBX1; Y-box-binding protein 1 
E        132738909 Wilms tumor protein 1-interacting protein homolog	K16682 AJUBA; LIM domain-containing protein 
E        132752412 putative helicase mov-10-B.1	K18422 MOV10; helicase MOV-10 [EC:5.6.2.5] 
E        132752420 putative helicase MOV-10	K18422 MOV10; helicase MOV-10 [EC:5.6.2.5] 
E        132716504 putative helicase MOV-10	K18422 MOV10; helicase MOV-10 [EC:5.6.2.5] 
E        132716947 putative helicase mov-10-B.1	K18422 MOV10; helicase MOV-10 [EC:5.6.2.5] 
E        132737079 uncharacterized protein LOC132737079	K18751 PNRC2; proline-rich nuclear receptor coactivator 2 
E        132720370 transportin-1-like	K18752 TNPO1; transportin-1 
E        132746503 LOW QUALITY PROTEIN: serine/threonine-protein kinase SMG1-like	K08873 SMG1; serine/threonine-protein kinase SMG1 [EC:2.7.11.1] 
E        132733236 nonsense-mediated mRNA decay factor SMG5-like	K11125 SMG5; protein SMG5 
E        132719019 telomerase-binding protein EST1A-like	K11124 SMG6; protein SMG6 [EC:3.1.-.-] 
E        132743092 nonsense-mediated mRNA decay factor SMG7-like	K14409 SMG7; protein SMG7 
E        132730672 nonsense-mediated mRNA decay factor SMG7-like	K14409 SMG7; protein SMG7 
E        132753196 mRNA decay activator protein ZFP36L2-like	K18753 ZFP36L; butyrate response factor 
E        132756513 protein lin-28 homolog isoform X1	K18754 LIN28; protein lin-28 
E        132726770 huntingtin-like isoform X1	K04533 HD; huntingtin 
E        132735919 protein bicaudal C homolog 1-B-like	K18756 BICC1; protein bicaudal C 
E        132748898 heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog	K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
E        132739966 heterogeneous nuclear ribonucleoprotein A1-like	K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
E        132730947 cAMP-dependent protein kinase catalytic subunit 1	K04345 PKA; protein kinase A [EC:2.7.11.11] 
E        132740770 la-related protein 1-like	K18757 LARP1; la-related protein 1 
E        132759872 la-related protein 1-like isoform X1	K18757 LARP1; la-related protein 1 
D      P-body specific factors
E        132757523 m7GpppN-mRNA hydrolase-like	K12613 DCP2; mRNA-decapping enzyme subunit 2 [EC:3.6.1.62] 
E        132733882 U6 snRNA-associated Sm-like protein LSm1	K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1 
E        132748249 U6 snRNA-associated Sm-like protein LSm2	K12621 LSM2; U6 snRNA-associated Sm-like protein LSm2 
E        132730842 U6 snRNA-associated Sm-like protein LSm3	K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3 
E        132747779 U6 snRNA-associated Sm-like protein LSm4	K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4 
E        132750531 U6 snRNA-associated Sm-like protein LSm5	K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5 
E        132756608 U6 snRNA-associated Sm-like protein LSm5	K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5 
E        132715171 U6 snRNA-associated Sm-like protein LSm6	K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6 
E        132715260 U6 snRNA-associated Sm-like protein LSm6	K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6 
E        132751994 U6 snRNA-associated Sm-like protein LSm7	K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7 
E        132737411 U6 snRNA-associated Sm-like protein LSm8	K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8 
E        132720122 kinesin light chain-like isoform X1	K10407 KLC; kinesin light chain 
E        132731005 unconventional myosin-Va-like isoform X1	K10357 MYO5; myosin V 
E        132747962 tubulin alpha-1A chain	K07374 TUBA; tubulin alpha 
E        132722045 tubulin alpha-8 chain-like	K07374 TUBA; tubulin alpha 
E        132736526 tubulin alpha-1A chain-like	K07374 TUBA; tubulin alpha 
E        132723471 tubulin alpha-1A chain-like	K07374 TUBA; tubulin alpha 
E        132723490 tubulin alpha-1A chain-like	K07374 TUBA; tubulin alpha 
E        132723491 tubulin alpha-1A chain-like	K07374 TUBA; tubulin alpha 
E        132751183 tubulin alpha-3 chain-like	K07374 TUBA; tubulin alpha 
E        132751276 tubulin alpha-1A chain-like	K07374 TUBA; tubulin alpha 
E        132739153 tubulin alpha-2/alpha-4 chain	K07374 TUBA; tubulin alpha 
E        132739155 tubulin alpha-3 chain-like	K07374 TUBA; tubulin alpha 
E        132740324 tubulin alpha-2/alpha-4 chain-like	K07374 TUBA; tubulin alpha 
E        132714783 tubulin alpha-1A chain-like	K07374 TUBA; tubulin alpha 
E        132714793 tubulin alpha-3 chain-like	K07374 TUBA; tubulin alpha 
E        132716096 tubulin alpha-1A chain-like	K07374 TUBA; tubulin alpha 
E        132759968 tubulin alpha chain-like	K07374 TUBA; tubulin alpha 
E        132760324 tubulin alpha-1A chain-like	K07374 TUBA; tubulin alpha 
E        132749396 cytoplasmic polyadenylation element-binding protein 1-like	K02602 CPEB; cytoplasmic polyadenylation element-binding protein 
E        132756240 cytoplasmic polyadenylation element-binding protein 2-like isoform X1	K02602 CPEB; cytoplasmic polyadenylation element-binding protein 
E        132721613 CCR4-NOT transcription complex subunit 1-like	K12604 CNOT1; CCR4-NOT transcription complex subunit 1 
E        132758125 CCR4-NOT transcription complex subunit 2-like	K12605 CNOT2; CCR4-NOT transcription complex subunit 2 
E        132758370 CCR4-NOT transcription complex subunit 3-like isoform X1	K12580 CNOT3; CCR4-NOT transcription complex subunit 3 
E        132736097 CCR4-NOT transcription complex subunit 4-like isoform X1	K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27] 
E        132713552 uncharacterized protein LOC132713552 isoform X1	K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4] 
E        132734154 CCR4-NOT transcription complex subunit 7-like	K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 
E        132723411 CCR4-NOT transcription complex subunit 8-like	K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 
E        132744499 DIS3-like exonuclease 2	K18758 DIS3L2; DIS3-like exonuclease 2 [EC:3.1.13.-] 
E        132747928 PAN2-PAN3 deadenylation complex catalytic subunit PAN2-like	K12571 PAN2; PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:3.1.13.4] 
E        132717201 PAN2-PAN3 deadenylation complex subunit pan3-like isoform X1	K12572 PAN3; PAB-dependent poly(A)-specific ribonuclease subunit 3 
E        132742382 protein BTG1-like	K14443 TOB; protein Tob/BTG 
E        132756831 protein BTG2-like	K14443 TOB; protein Tob/BTG 
E        132759504 protein Tob1-like	K14443 TOB; protein Tob/BTG 
E        132755008 enhancer of mRNA-decapping protein 3-like	K12615 EDC3; enhancer of mRNA-decapping protein 3 
E        132723292 LOW QUALITY PROTEIN: enhancer of mRNA-decapping protein 4-like	K12616 EDC4; enhancer of mRNA-decapping protein 4 
E        132713105 uncharacterized protein LOC132713105	K18760 NANOS2; protein nanos 2 
E        132753914 regulator of nonsense transcripts 2-like	K14327 UPF2; regulator of nonsense transcripts 2 
E        132718274 regulator of nonsense transcripts 3B-like	K14328 UPF3; regulator of nonsense transcripts 3 
E        132721084 E3 ubiquitin-protein ligase TRIM71-like	K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27] 
E        132734657 E3 ubiquitin-protein ligase TRIM71-like	K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27] 
E        132734704 DNA-directed RNA polymerase II subunit RPB7	K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7 
E        132749241 YTH domain-containing family protein 3-like	K20102 YTHDF; YTH domain-containing family protein 
D      Stress granule specific factors
E        132730605 nucleolysin TIAR-like isoform X1	K13201 TIA1; nucleolysin TIA-1/TIAR 
E        132744958 polyadenylate-binding protein 1A-like	K13126 PABPC; polyadenylate-binding protein 
E        132723046 double-stranded RNA-binding protein Staufen homolog	K17597 STAU; double-stranded RNA-binding protein Staufen 
E        132757494 double-stranded RNA-binding protein Staufen homolog isoform X1	K17597 STAU; double-stranded RNA-binding protein Staufen 
E        132735870 RNA-binding protein FXR1-like isoform X1	K15516 FMR; fragile X mental retardation protein 
E        132758171 ELAV-like protein 1-B	K13088 ELAVL1; ELAV-like protein 1 
E        132752755 ras GTPase-activating protein-binding protein 2-like	K24983 G3BP2; Ras GTPase-activating protein-binding protein 2 
E        132714431 eukaryotic translation initiation factor 2A-like	K15026 EIF2A; translation initiation factor 2A 
E        132720189 eukaryotic translation initiation factor 3 subunit B-like	K03253 EIF3B; translation initiation factor 3 subunit B 
E        132736667 eukaryotic initiation factor 4A-I-like	K03257 EIF4A; translation initiation factor 4A 
E        132739421 uncharacterized protein LOC132739421	K03257 EIF4A; translation initiation factor 4A 
E        132715067 eukaryotic initiation factor 4A-III	K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7] 
E        132732338 eukaryotic translation initiation factor 4B-like isoform X1	K03258 EIF4B; translation initiation factor 4B 
E        132740603 eukaryotic translation initiation factor 4 gamma 1-like	K03260 EIF4G; translation initiation factor 4G 
E        132730738 eukaryotic translation initiation factor 4 gamma 2-like	K03260 EIF4G; translation initiation factor 4G 
E        132730668 ribosomal protein S6 kinase alpha-1-like isoform X1	K04373 RPS6KA; ribosomal protein S6 kinase alpha-1/2/3/6 [EC:2.7.11.1] 
E        132734806 small ribosomal subunit protein RACK1-like	K14753 RACK1; guanine nucleotide-binding protein subunit beta-2-like 1 protein 
E        132725349 TNF receptor-associated factor 2-like	K03173 TRAF2; TNF receptor-associated factor 2 [EC:2.3.2.27] 
E        132721883 nuclear RNA export factor 1-like	K14284 NXF; nuclear RNA export factor 
E        132741727 tudor domain-containing protein 3-like	K18404 TDRD3; tudor domain-containing protein 3 
B  mRNA degradation factors
C    5'-3' decay
D      Decapping complex
E        132757523 m7GpppN-mRNA hydrolase-like	K12613 DCP2; mRNA-decapping enzyme subunit 2 [EC:3.6.1.62] 
E        132746410 ATP-dependent RNA helicase me31b-like	K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7] 
E        132755008 enhancer of mRNA-decapping protein 3-like	K12615 EDC3; enhancer of mRNA-decapping protein 3 
E        132723292 LOW QUALITY PROTEIN: enhancer of mRNA-decapping protein 4-like	K12616 EDC4; enhancer of mRNA-decapping protein 4 
D      Lsm complex
E        132733882 U6 snRNA-associated Sm-like protein LSm1	K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1 
E        132748249 U6 snRNA-associated Sm-like protein LSm2	K12621 LSM2; U6 snRNA-associated Sm-like protein LSm2 
E        132730842 U6 snRNA-associated Sm-like protein LSm3	K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3 
E        132747779 U6 snRNA-associated Sm-like protein LSm4	K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4 
E        132750531 U6 snRNA-associated Sm-like protein LSm5	K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5 
E        132756608 U6 snRNA-associated Sm-like protein LSm5	K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5 
E        132715171 U6 snRNA-associated Sm-like protein LSm6	K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6 
E        132715260 U6 snRNA-associated Sm-like protein LSm6	K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6 
E        132751994 U6 snRNA-associated Sm-like protein LSm7	K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7 
E        132737411 U6 snRNA-associated Sm-like protein LSm8	K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8 
D      5' exonucleases
E        132721509 LOW QUALITY PROTEIN: 5'-3' exoribonuclease 1-like	K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-] 
E        132721004 5'-3' exoribonuclease 2-like	K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-] 
E        132723837 5'-3' exoribonuclease 2-like isoform X1	K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-] 
E        132742214 U8 snoRNA-decapping enzyme-like	K16855 NUDT16; U8 snoRNA-decapping enzyme [EC:3.6.1.62 3.6.1.64] 
E        132742215 U8 snoRNA-decapping enzyme-like	K16855 NUDT16; U8 snoRNA-decapping enzyme [EC:3.6.1.62 3.6.1.64] 
D      Other 5'-3' decay factors
E        132757179 m7GpppX diphosphatase-like	K12584 DCPS; m7GpppX diphosphatase [EC:3.6.1.59] 
E        132737937 probable helicase with zinc finger domain	K25168 HELZ; helicase with zinc finger domain [EC:5.6.2.-] 
C    3'-5' decay
D      Core exosome factors
E        132734436 exosome complex component CSL4-like	K07573 CSL4; exosome complex component CSL4 
E        132712701 exosome complex component CSL4-like	K07573 CSL4; exosome complex component CSL4 
E        132712881 exosome complex component RRP4-like	K03679 RRP4; exosome complex component RRP4 
E        132759005 LOW QUALITY PROTEIN: exosome complex component RRP4-like	K03679 RRP4; exosome complex component RRP4 
E        132747980 exosome complex component RRP40-like	K03681 RRP40; exosome complex component RRP40 
E        132738977 exosome complex component RRP40-like	K03681 RRP40; exosome complex component RRP40 
E        132755403 exosome complex component RRP41-like	K11600 RRP41; exosome complex component RRP41 
E        132737954 exosome complex component RRP46-like	K12590 RRP46; exosome complex component RRP46 
E        132745337 exosome complex component MTR3-like	K12587 MTR3; exosome complex component MTR3 
E        132717980 exosome complex component RRP42-like	K12589 RRP42; exosome complex component RRP42 
E        132752127 exosome complex component RRP43-like	K12586 RRP43; exosome complex component RRP43 
E        132751377 exosome complex component RRP45-like	K03678 RRP45; exosome complex component RRP45 
D      Exosome cofactors
E        132756291 exosome complex exonuclease RRP44-like	K12585 DIS3; exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-] 
E        132758536 exosome complex exonuclease RRP44-like	K12585 DIS3; exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-] 
E        132747609 LOW QUALITY PROTEIN: DIS3-like exonuclease 1	K18681 DIS3L; DIS3-like exonuclease 1 [EC:3.1.13.-] 
E        132742249 exosome component 10-like	K12591 RRP6; exosome complex exonuclease RRP6 [EC:3.1.13.-] 
E        132736108 nuclear nucleic acid-binding protein C1D-like	K12592 C1D; exosome complex protein LRP1 
E        132750290 nuclear nucleic acid-binding protein C1D-like	K12592 C1D; exosome complex protein LRP1 
E        132738915 M-phase phosphoprotein 6-like	K12593 MPHOSPH6; M-phase phosphoprotein 6, animal type 
E        132715334 M-phase phosphoprotein 6-like	K12593 MPHOSPH6; M-phase phosphoprotein 6, animal type 
D      TRAMP complex
E        132739749 terminal nucleotidyltransferase 4B-like isoform X1	K03514 PAPD5_7; non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19] 
E        132755080 terminal nucleotidyltransferase 4B-like	K03514 PAPD5_7; non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19] 
E        132738025 uncharacterized protein LOC132738025 isoform X1	K12597 AIR1_2; protein AIR1/2 
E        132727311 exosome RNA helicase MTR4-like	K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6] 
D      Ski complex
E        132739732 superkiller complex protein 2-like	K12599 SKI2; antiviral helicase SKI2 [EC:5.6.2.6] 
E        132749631 tetratricopeptide repeat protein 37-like	K12600 SKI3; superkiller protein 3 
E        132749632 tetratricopeptide repeat protein 37-like	K12600 SKI3; superkiller protein 3 
E        132718401 LOW QUALITY PROTEIN: superkiller complex protein 8-like	K12602 WDR61; WD repeat-containing protein 61 
D      Ccr4-NOT complex
E        132713552 uncharacterized protein LOC132713552 isoform X1	K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4] 
E        132721613 CCR4-NOT transcription complex subunit 1-like	K12604 CNOT1; CCR4-NOT transcription complex subunit 1 
E        132758125 CCR4-NOT transcription complex subunit 2-like	K12605 CNOT2; CCR4-NOT transcription complex subunit 2 
E        132758370 CCR4-NOT transcription complex subunit 3-like isoform X1	K12580 CNOT3; CCR4-NOT transcription complex subunit 3 
E        132736097 CCR4-NOT transcription complex subunit 4-like isoform X1	K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27] 
E        132734154 CCR4-NOT transcription complex subunit 7-like	K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 
E        132723411 CCR4-NOT transcription complex subunit 8-like	K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 
E        132730182 CCR4-NOT transcription complex subunit 9-like	K12606 RCD1; CCR4-NOT transcription complex subunit 9 
E        132721086 CCR4-NOT transcription complex subunit 10-like	K12607 CNOT10; CCR4-NOT transcription complex subunit 10 
D      Pan complex
E        132747928 PAN2-PAN3 deadenylation complex catalytic subunit PAN2-like	K12571 PAN2; PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:3.1.13.4] 
E        132717201 PAN2-PAN3 deadenylation complex subunit pan3-like isoform X1	K12572 PAN3; PAB-dependent poly(A)-specific ribonuclease subunit 3 
D      Other 3'-5' decay factors
E        132751481 poly(A)-specific ribonuclease PARN-like	K01148 PARN; poly(A)-specific ribonuclease [EC:3.1.13.4] 
E        132726332 poly(A)-specific ribonuclease PNLDC1-like	K01148 PARN; poly(A)-specific ribonuclease [EC:3.1.13.4] 
E        132728051 poly(A)-specific ribonuclease PNLDC1-like	K01148 PARN; poly(A)-specific ribonuclease [EC:3.1.13.4] 
E        132729703 poly(A)-specific ribonuclease PNLDC1-like	K01148 PARN; poly(A)-specific ribonuclease [EC:3.1.13.4] 
E        132730684 ATP-dependent DNA/RNA helicase DHX36-like	K14442 DHX36; ATP-dependent RNA helicase DHX36 [EC:5.6.2.6] 
E        132742382 protein BTG1-like	K14443 TOB; protein Tob/BTG 
E        132756831 protein BTG2-like	K14443 TOB; protein Tob/BTG 
E        132759504 protein Tob1-like	K14443 TOB; protein Tob/BTG 
E        132724865 nocturnin-like	K18764 NOCT; nocturnin [EC:3.1.3.108] 
E        132719110 nocturnin-like	K18764 NOCT; nocturnin [EC:3.1.3.108] 
E        132732815 3'-5' exoribonuclease 1-like	K18416 THEX1; 3'-5' exoribonuclease 1 [EC:3.1.-.-] 
E        132758971 ERI1 exoribonuclease 2-like	K18417 ERI2; ERI1 exoribonuclease 2 [EC:3.1.-.-] 
E        132757179 m7GpppX diphosphatase-like	K12584 DCPS; m7GpppX diphosphatase [EC:3.6.1.59] 
E        132754660 2',5'-phosphodiesterase 12-like	K19612 PDE12; 2',5'-phosphodiesterase [EC:3.1.13.4 3.1.4.-] 
E        132737937 probable helicase with zinc finger domain	K25168 HELZ; helicase with zinc finger domain [EC:5.6.2.-] 
E        132725193 helicase with zinc finger domain 2-like	K25165 HELZ2; 3'-5' exoribonuclease HELZ2 [EC:3.1.13.1 5.6.2.6] 
E        132725201 helicase with zinc finger domain 2-like isoform X1	K25165 HELZ2; 3'-5' exoribonuclease HELZ2 [EC:3.1.13.1 5.6.2.6] 
E        132725205 helicase with zinc finger domain 2-like isoform X1	K25165 HELZ2; 3'-5' exoribonuclease HELZ2 [EC:3.1.13.1 5.6.2.6] 
E        132725207 helicase with zinc finger domain 2-like	K25165 HELZ2; 3'-5' exoribonuclease HELZ2 [EC:3.1.13.1 5.6.2.6] 
E        132733637 nuclear exosome regulator NRDE2-like isoform X1	K26109 NRDE2; nuclear exosome regulator NRDE2 
E        132747409 protein Smaug homolog 1-like isoform X1	K27396 SMG; protein Smaug 
E        132715409 focadhesin-like	K27498 FOCAD; focadhesin 
C    Other degradation factors
D      RNases
E        132756034 probable ribonuclease ZC3H12C	K18668 ZC3H12; ribonuclease ZC3H12 [EC:3.1.-.-] 
#
A<b>Prokaryotic type</b>
B  Bacterial mRNA degradation factors
C    RNA degradosome components
D      Ribonucreases
E        132741529 ribonuclease 3-like	K03685 rnc; ribonuclease III [EC:3.1.26.3] 
E        132742271 probable oligoribonuclease isoform X1	K13288 orn; oligoribonuclease [EC:3.1.-.-] 
D      Helicases
E        132733046 ATP-dependent DNA helicase RecQ-like	K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] 
E        132737158 uncharacterized protein LOC132737158	K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] 
E        132742208 ATP-dependent DNA helicase RecQ-like	K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] 
E        132742509 uncharacterized protein LOC132742509	K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] 
E        132729963 uncharacterized protein LOC132729963	K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] 
E        132715950 ATP-dependent DNA helicase RecQ-like	K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] 
E        132716695 putative ATP-dependent DNA helicase Q1	K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] 
E        132718053 uncharacterized protein LOC132718053	K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] 
E        132719355 uncharacterized protein LOC132719355	K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] 
D      Other RNA degradosome components
E        132726570 enolase-like	K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] 
E        132738328 polyribonucleotide nucleotidyltransferase 1, mitochondrial-like	K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] 
E        132732296 ATP-dependent 6-phosphofructokinase, muscle type-like isoform X1	K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] 
C    Other RNA degradation factors
D      Chaperones
E        132715294 stress-70 protein, mitochondrial-like	K04043 dnaK; molecular chaperone DnaK 
E        132727322 60 kDa heat shock protein, mitochondrial-like	K04077 groEL; chaperonin GroEL [EC:5.6.1.7] 
D      Others
D      Bacterial Small RNA Regulators
B  Archeal mRNA degradation factors
C    Exosome components
D      Core exosome
E        132712881 exosome complex component RRP4-like	K03679 RRP4; exosome complex component RRP4 
E        132759005 LOW QUALITY PROTEIN: exosome complex component RRP4-like	K03679 RRP4; exosome complex component RRP4 
E        132734436 exosome complex component CSL4-like	K07573 CSL4; exosome complex component CSL4 
E        132712701 exosome complex component CSL4-like	K07573 CSL4; exosome complex component CSL4 
D      Cofactors
E        132755403 exosome complex component RRP41-like	K11600 RRP41; exosome complex component RRP41 
E        132717980 exosome complex component RRP42-like	K12589 RRP42; exosome complex component RRP42 
D      Others
!
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#Last updated: April 25, 2024