+D GENES KO
#
KEGG Orthology (KO) - Rhodopseudomonas palustris TIE-1
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:rpt00010]
D Rpal_4155 transaldolase K13810 tal-pgi; transaldolase / glucose-6-phosphate isomerase [EC:2.2.1.2 5.3.1.9]
D Rpal_0383 1-phosphofructokinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
D Rpal_5126 Inositol phosphatase/fructose-16-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D Rpal_2784 fructose-1,6-bisphosphatase, class II K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D Rpal_1010 Fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D Rpal_5123 fructose-bisphosphate aldolase, class II, Calvin cycle subtype K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Rpal_3233 Triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D Rpal_1014 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Rpal_1013 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D Rpal_0343 phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D Rpal_3216 Phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Rpal_2513 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Rpal_4673 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Rpal_1243 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D Rpal_3209 pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D Rpal_3208 Transketolase central region K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D Rpal_3206 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D Rpal_3205 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Rpal_0180 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Rpal_5202 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D Rpal_1419 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Rpal_1420 thiamine pyrophosphate domain protein TPP-binding K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Rpal_4444 Alcohol dehydrogenase zinc-binding domain protein K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D Rpal_2166 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D Rpal_4176 Alcohol dehydrogenase GroES domain protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D Rpal_0378 zinc-binding alcohol dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D Rpal_1398 iron-containing alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
D Rpal_3477 Alcohol dehydrogenase GroES domain protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D Rpal_2445 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Rpal_1399 Aldehyde Dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D Rpal_0209 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Rpal_2545 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Rpal_3934 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Rpal_3244 HAD-superfamily hydrolase, subfamily IA, variant 3 K20866 yihX; glucose-1-phosphatase [EC:3.1.3.10]
D Rpal_1671 phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D Rpal_3744 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D Rpal_0363 Phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
C 00020 Citrate cycle (TCA cycle) [PATH:rpt00020]
D Rpal_3253 citrate synthase I K01647 CS; citrate synthase [EC:2.3.3.1]
D Rpal_0199 aconitate hydratase 1 K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D Rpal_4362 isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D Rpal_0184 2-oxoglutarate dehydrogenase, E1 subunit K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D Rpal_0183 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D Rpal_3205 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Rpal_0180 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Rpal_1419 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Rpal_1420 thiamine pyrophosphate domain protein TPP-binding K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Rpal_1421 pyruvate ferredoxin/flavodoxin oxidoreductase K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D Rpal_0185 succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D Rpal_0186 succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D Rpal_0538 succinate CoA transferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D Rpal_0216 succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D Rpal_0215 succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D Rpal_0218 succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D Rpal_0217 succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D Rpal_4397 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D Rpal_1545 fumarate hydratase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D Rpal_4014 fumarate hydratase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D Rpal_0187 malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D Rpal_1548 malate/quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D Rpal_0363 Phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D Rpal_3209 pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D Rpal_3208 Transketolase central region K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D Rpal_3206 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D Rpal_5202 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
C 00030 Pentose phosphate pathway [PATH:rpt00030]
D Rpal_4155 transaldolase K13810 tal-pgi; transaldolase / glucose-6-phosphate isomerase [EC:2.2.1.2 5.3.1.9]
D Rpal_4157 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D Rpal_4158 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D Rpal_4156 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D Rpal_4340 Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D Rpal_5124 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Rpal_1015 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Rpal_2194 ribose 5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D Rpal_1869 Phosphoketolase K01621 xfp; xylulose-5-phosphate/fructose-6-phosphate phosphoketolase [EC:4.1.2.9 4.1.2.22]
D Rpal_1671 phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D Rpal_3744 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D Rpal_0755 phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN K05774 phnN; ribose 1,5-bisphosphokinase [EC:2.7.4.23]
D Rpal_4626 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D Rpal_4846 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D Rpal_3825 membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family K00117 gcd; quinoprotein glucose dehydrogenase [EC:1.1.5.2]
D Rpal_4144 SMP-30/Gluconolaconase/LRE domain protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
D Rpal_4159 carbohydrate kinase, thermoresistant glucokinase family K00851 idnK; gluconokinase [EC:2.7.1.12]
D Rpal_2000 Hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D Rpal_1010 Fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D Rpal_5123 fructose-bisphosphate aldolase, class II, Calvin cycle subtype K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Rpal_5126 Inositol phosphatase/fructose-16-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D Rpal_2784 fructose-1,6-bisphosphatase, class II K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D Rpal_0383 1-phosphofructokinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions [PATH:rpt00040]
D Rpal_4548 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D Rpal_0955 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Rpal_4340 Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D Rpal_3962 Dihydroxy-acid dehydratase K22186 xylD; xylonate dehydratase [EC:4.2.1.82]
C 00051 Fructose and mannose metabolism [PATH:rpt00051]
D Rpal_3745 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D Rpal_3744 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D Rpal_4442 Nucleotidyl transferase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D Rpal_4472 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D Rpal_3963 short-chain dehydrogenase/reductase SDR K18335 E1.1.1.434; 2-dehydro-3-deoxy-L-fuconate 4-dehydrogenase [EC:1.1.1.434]
D Rpal_3964 short-chain dehydrogenase/reductase SDR K21883 lra5; 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD+) [EC:1.1.1.401]
D Rpal_0383 1-phosphofructokinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
D Rpal_5126 Inositol phosphatase/fructose-16-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D Rpal_2784 fructose-1,6-bisphosphatase, class II K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D Rpal_1010 Fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D Rpal_5123 fructose-bisphosphate aldolase, class II, Calvin cycle subtype K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Rpal_3233 Triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D Rpal_4473 NAD-dependent epimerase/dehydratase K15856 rmd; GDP-4-dehydro-6-deoxy-D-mannose reductase [EC:1.1.1.281]
D Rpal_0358 PTS system fructose subfamily IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
C 00052 Galactose metabolism [PATH:rpt00052]
D Rpal_4513 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Rpal_5062 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Rpal_0955 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Rpal_1671 phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D Rpal_3744 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D Rpal_0383 1-phosphofructokinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
D Rpal_5242 alpha amylase catalytic region K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
C 00053 Ascorbate and aldarate metabolism [PATH:rpt00053]
D Rpal_4548 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D Rpal_4144 SMP-30/Gluconolaconase/LRE domain protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
D Rpal_4503 NAD-dependent epimerase/dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D Rpal_2445 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00500 Starch and sucrose metabolism [PATH:rpt00500]
D Rpal_5242 alpha amylase catalytic region K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D Rpal_0955 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Rpal_1936 beta-galactosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D Rpal_5064 glycoside hydrolase family 5 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D Rpal_0385 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D Rpal_0386 glycogen/starch synthase, ADP-glucose type K00703 glgA; starch synthase [EC:2.4.1.21]
D Rpal_4165 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D Rpal_5208 glycogen/starch/alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D Rpal_4164 trehalose synthase K05343 treS; maltose alpha-D-glucosyltransferase / alpha-amylase [EC:5.4.99.16 3.2.1.1]
D Rpal_4162 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D Rpal_4163 alpha amylase catalytic region K16147 glgE; starch synthase (maltosyl-transferring) [EC:2.4.99.16]
D Rpal_3733 glycogen debranching enzyme GlgX K01214 ISA; isoamylase [EC:3.2.1.68]
D Rpal_4166 glycogen debranching enzyme GlgX K01214 ISA; isoamylase [EC:3.2.1.68]
D Rpal_4168 malto-oligosyltrehalose synthase K06044 treY; (1->4)-alpha-D-glucan 1-alpha-D-glucosylmutase [EC:5.4.99.15]
D Rpal_4167 malto-oligosyltrehalose trehalohydrolase K01236 treZ; maltooligosyltrehalose trehalohydrolase [EC:3.2.1.141]
D Rpal_3836 Alpha,alpha-trehalose-phosphate synthase (UDP-forming) K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
D Rpal_5141 alpha,alpha-trehalose-phosphate synthase (UDP-forming) K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
D Rpal_5142 HAD-superfamily hydrolase, subfamily IIB K01087 otsB; trehalose 6-phosphate phosphatase [EC:3.1.3.12]
D Rpal_1671 phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D Rpal_3744 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D Rpal_4155 transaldolase K13810 tal-pgi; transaldolase / glucose-6-phosphate isomerase [EC:2.2.1.2 5.3.1.9]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:rpt00520]
D Rpal_3192 Beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D Rpal_2934 glucosamine/fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D Rpal_4798 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D Rpal_2933 UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D Rpal_2739 protein of unknown function UPF0075 K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D Rpal_0081 protein of unknown function UPF0079 K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221]
D Rpal_0079 Nucleotidyl transferase K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99]
D Rpal_5024 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D Rpal_4046 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D Rpal_4578 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D Rpal_4586 polysaccharide biosynthesis protein CapD K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-]
D Rpal_0168 NAD-dependent epimerase/dehydratase K08678 UXS1; UDP-glucuronate decarboxylase [EC:4.1.1.35]
D Rpal_1671 phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D Rpal_3744 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D Rpal_0955 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Rpal_4548 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D Rpal_4513 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Rpal_5062 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Rpal_4503 NAD-dependent epimerase/dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D Rpal_0358 PTS system fructose subfamily IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D Rpal_4155 transaldolase K13810 tal-pgi; transaldolase / glucose-6-phosphate isomerase [EC:2.2.1.2 5.3.1.9]
D Rpal_4442 Nucleotidyl transferase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D Rpal_3745 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D Rpal_4472 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D Rpal_4473 NAD-dependent epimerase/dehydratase K15856 rmd; GDP-4-dehydro-6-deoxy-D-mannose reductase [EC:1.1.1.281]
D Rpal_0385 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:rpt00620]
D Rpal_0209 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Rpal_2545 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Rpal_3934 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Rpal_5202 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D Rpal_1419 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Rpal_1420 thiamine pyrophosphate domain protein TPP-binding K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Rpal_3209 pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D Rpal_3208 Transketolase central region K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D Rpal_3206 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D Rpal_3205 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Rpal_0180 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Rpal_4176 Alcohol dehydrogenase GroES domain protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D Rpal_0378 zinc-binding alcohol dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D Rpal_1398 iron-containing alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
D Rpal_3477 Alcohol dehydrogenase GroES domain protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D Rpal_4444 Alcohol dehydrogenase zinc-binding domain protein K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D Rpal_2166 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D Rpal_5046 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D Rpal_2513 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Rpal_4673 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Rpal_0509 acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D Rpal_2714 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D Rpal_2713 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D Rpal_0074 acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D Rpal_3583 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D Rpal_2445 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Rpal_1399 Aldehyde Dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D Rpal_0538 succinate CoA transferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D Rpal_4800 L-lactate dehydrogenase (cytochrome) K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3]
D Rpal_1531 thiamine pyrophosphate protein TPP binding domain protein K00156 poxB; pyruvate dehydrogenase (quinone) [EC:1.2.5.1]
D Rpal_4018 FAD linked oxidase domain protein K00102 LDHD; D-lactate dehydrogenase (cytochrome) [EC:1.1.2.4]
D Rpal_2799 Glyoxalase/bleomycin resistance protein/dioxygenase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D Rpal_0614 hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D Rpal_0571 beta-lactamase domain protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D Rpal_3452 Malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)), Phosphate acetyltransferase K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D Rpal_3584 putative carboxy-phosphonoenolpyruvate mutase K01003 bcpA; oxaloacetate decarboxylase [EC:4.1.1.112]
D Rpal_0187 malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D Rpal_1548 malate/quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D Rpal_4397 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D Rpal_1545 fumarate hydratase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D Rpal_4014 fumarate hydratase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D Rpal_1972 Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D Rpal_0363 Phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D Rpal_1243 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D Rpal_4697 malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9]
D Rpal_3607 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rpal_0886 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rpal_1903 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rpal_4830 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rpal_0532 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rpal_2547 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rpal_3956 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rpal_1956 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rpal_4236 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rpal_2211 2-isopropylmalate synthase/homocitrate synthase family protein K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D Rpal_2259 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D Rpal_5146 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D Rpal_5088 homocitrate synthase K02594 nifV; homocitrate synthase NifV [EC:2.3.3.14]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:rpt00630]
D Rpal_4878 isocitrate lyase and phosphorylmutase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1]
D Rpal_0209 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Rpal_2545 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Rpal_3934 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Rpal_4697 malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9]
D Rpal_0187 malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D Rpal_3253 citrate synthase I K01647 CS; citrate synthase [EC:2.3.3.1]
D Rpal_0199 aconitate hydratase 1 K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D Rpal_3607 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rpal_0886 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rpal_1903 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rpal_4830 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rpal_0532 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rpal_2547 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rpal_3956 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rpal_1956 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rpal_4236 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rpal_0533 acetoacetyl-CoA reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D Rpal_3282 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D Rpal_3585 Carbamoyl-phosphate synthase L chain ATP-binding K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3]
D Rpal_3618 carboxyl transferase K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D Rpal_2039 methylmalonyl-CoA mutase, large subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D Rpal_2041 Methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D Rpal_1321 FAD linked oxidase domain protein K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]
D Rpal_1322 FAD linked oxidase domain protein K11472 glcE; glycolate dehydrogenase FAD-binding subunit [EC:1.1.99.14]
D Rpal_1323 protein of unknown function DUF224 cysteine-rich region domain protein K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14]
D Rpal_3732 Catalase K03781 katE; catalase [EC:1.11.1.6]
D Rpal_0426 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding K00015 gyaR; glyoxylate reductase [EC:1.1.1.26]
D Rpal_2193 phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D Rpal_5122 Ribulose-bisphosphate carboxylase K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39]
D Rpal_1747 Ribulose-bisphosphate carboxylase K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39]
D Rpal_0263 RiBisCO-like protein K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39]
D Rpal_1748 Ribulose-bisphosphate carboxylase K01602 rbcS; ribulose-bisphosphate carboxylase small chain [EC:4.1.1.39]
D Rpal_0857 aminotransferase class V K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D Rpal_1176 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Rpal_3315 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Rpal_4690 Glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Rpal_3135 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Rpal_3004 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Rpal_4375 glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D Rpal_4373 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Rpal_3205 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Rpal_0180 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Rpal_4374 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D Rpal_2000 Hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D Rpal_1942 tartrate dehydrogenase K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83]
D Rpal_1526 bicupin, oxalate decarboxylase family K01569 oxdD; oxalate decarboxylase [EC:4.1.1.2]
D Rpal_0807 putative NAD-dependent formate dehydrogenase K00126 fdsD; formate dehydrogenase subunit delta [EC:1.17.1.9]
D Rpal_0805 formate dehydrogenase, alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D Rpal_0804 NADH dehydrogenase (quinone) K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D Rpal_0803 NADH dehydrogenase (ubiquinone) 24 kDa subunit K00127 fdoI; formate dehydrogenase subunit gamma
D Rpal_2955 conserved hypothetical protein K01432 AFMID; arylformamidase [EC:3.5.1.9]
D Rpal_3396 conserved hypothetical protein K01432 AFMID; arylformamidase [EC:3.5.1.9]
D Rpal_4562 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D Rpal_1448 Formamidase K01455 E3.5.1.49; formamidase [EC:3.5.1.49]
D Rpal_2134 Formamidase K01455 E3.5.1.49; formamidase [EC:3.5.1.49]
C 00640 Propanoate metabolism [PATH:rpt00640]
D Rpal_0209 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Rpal_2545 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Rpal_3934 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Rpal_4996 AMP-dependent synthetase and ligase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D Rpal_5046 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D Rpal_3205 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Rpal_0180 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Rpal_2548 acyl-CoA dehydrogenase domain protein K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D Rpal_1248 quinone oxidoreductase, YhdH/YhfP family K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-]
D Rpal_5139 quinone oxidoreductase, YhdH/YhfP family K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-]
D Rpal_2014 Enoyl-CoA hydratase/isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D Rpal_0887 3-hydroxyacyl-CoA dehydrogenase NAD-binding K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D Rpal_0509 acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D Rpal_2714 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D Rpal_2713 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D Rpal_0074 acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D Rpal_0562 Malonyl-CoA decarboxylase K01578 MLYCD; malonyl-CoA decarboxylase [EC:4.1.1.9]
D Rpal_2567 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D Rpal_1370 Beta-alanine--pyruvate transaminase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D Rpal_3585 Carbamoyl-phosphate synthase L chain ATP-binding K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3]
D Rpal_3618 carboxyl transferase K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D Rpal_3282 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D Rpal_2039 methylmalonyl-CoA mutase, large subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D Rpal_2041 Methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D Rpal_0186 succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D Rpal_0185 succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D Rpal_3940 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D Rpal_2647 2-methylcitrate synthase/citrate synthase II K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D Rpal_2646 2-methylcitrate dehydratase K01720 prpD; 2-methylcitrate dehydratase [EC:4.2.1.79]
D Rpal_2648 methylisocitrate lyase K03417 prpB; methylisocitrate lyase [EC:4.1.3.30]
C 00650 Butanoate metabolism [PATH:rpt00650]
D Rpal_3607 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rpal_0886 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rpal_1903 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rpal_4830 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rpal_0532 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rpal_2547 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rpal_3956 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rpal_1956 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rpal_4236 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rpal_5230 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D Rpal_4238 3-hydroxyacyl-CoA dehydrogenase NAD-binding K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D Rpal_0887 3-hydroxyacyl-CoA dehydrogenase NAD-binding K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D Rpal_2014 Enoyl-CoA hydratase/isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D Rpal_2548 acyl-CoA dehydrogenase domain protein K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D Rpal_5047 Phosphate butyryltransferase K00634 ptb; phosphate butyryltransferase [EC:2.3.1.19]
D Rpal_4722 Poly-beta-hydroxybutyrate polymerase domain protein K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D Rpal_2780 poly(R)-hydroxyalkanoic acid synthase, class I K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D Rpal_0578 polyhydroxyalkanoate depolymerase, intracellular K05973 phaZ; poly(3-hydroxybutyrate) depolymerase [EC:3.1.1.75]
D Rpal_0533 acetoacetyl-CoA reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D Rpal_2561 coenzyme A transferase K01039 gctA; glutaconate CoA-transferase, subunit A [EC:2.8.3.12]
D Rpal_5132 coenzyme A transferase K01039 gctA; glutaconate CoA-transferase, subunit A [EC:2.8.3.12]
D Rpal_1221 coenzyme A transferase K01039 gctA; glutaconate CoA-transferase, subunit A [EC:2.8.3.12]
D Rpal_5133 coenzyme A transferase K01040 gctB; glutaconate CoA-transferase, subunit B [EC:2.8.3.12]
D Rpal_2560 coenzyme A transferase K01040 gctB; glutaconate CoA-transferase, subunit B [EC:2.8.3.12]
D Rpal_1222 coenzyme A transferase K01040 gctB; glutaconate CoA-transferase, subunit B [EC:2.8.3.12]
D Rpal_1942 tartrate dehydrogenase K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83]
D Rpal_0216 succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D Rpal_0215 succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D Rpal_0218 succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D Rpal_0217 succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D Rpal_2567 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D Rpal_0465 succinic semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Rpal_2568 succinic semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Rpal_0538 succinate CoA transferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D Rpal_5202 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D Rpal_1419 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Rpal_1420 thiamine pyrophosphate domain protein TPP-binding K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Rpal_2810 pyruvate carboxyltransferase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D Rpal_4635 3-oxoacid CoA-transferase, A subunit K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D Rpal_4634 3-oxoacid CoA-transferase, B subunit K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D Rpal_4687 3-hydroxybutyrate dehydrogenase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30]
D Rpal_0463 beta-lactamase K18372 acmB; methyl acetate hydrolase [EC:3.1.1.114]
D Rpal_2212 thiamine pyrophosphate domain protein TPP-binding K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Rpal_2242 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Rpal_4440 thiamine pyrophosphate protein TPP binding domain protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Rpal_2570 thiamine pyrophosphate domain protein TPP-binding K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Rpal_1808 thiamine pyrophosphate domain protein TPP-binding K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Rpal_4284 thiamine pyrophosphate domain protein TPP-binding K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Rpal_2243 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D Rpal_0111 Alcohol dehydrogenase GroES domain protein K00004 BDH; (R,R)-butanediol dehydrogenase / meso-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.4 1.1.1.- 1.1.1.303]
D Rpal_0113 short-chain dehydrogenase/reductase SDR K18009 budC; meso-butanediol dehydrogenase / (S,S)-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.- 1.1.1.76 1.1.1.304]
C 00660 C5-Branched dibasic acid metabolism [PATH:rpt00660]
D Rpal_2212 thiamine pyrophosphate domain protein TPP-binding K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Rpal_2242 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Rpal_4440 thiamine pyrophosphate protein TPP binding domain protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Rpal_2570 thiamine pyrophosphate domain protein TPP-binding K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Rpal_1808 thiamine pyrophosphate domain protein TPP-binding K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Rpal_4284 thiamine pyrophosphate domain protein TPP-binding K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Rpal_2243 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D Rpal_1801 L-carnitine dehydratase/bile acid-inducible protein F K18289 ict-P; itaconate CoA-transferase [EC:2.8.3.- 2.8.3.22]
D Rpal_0186 succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D Rpal_0185 succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D Rpal_5179 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17]
D Rpal_0240 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D Rpal_0234 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D Rpal_0226 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:rpt00562]
D Rpal_1007 Inositol-phosphate phosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D Rpal_1347 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D Rpal_3940 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D Rpal_3233 Triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:rpt00190]
D Rpal_3300 NADH-ubiquinone/plastoquinone oxidoreductase chain 3 K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D Rpal_4743 NADH-ubiquinone/plastoquinone oxidoreductase chain 3 K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D Rpal_3299 NADH-quinone oxidoreductase, B subunit K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D Rpal_4742 NADH-quinone oxidoreductase, B subunit K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D Rpal_3298 NADH (or F420H2) dehydrogenase, subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D Rpal_3297 NADH dehydrogenase I, D subunit K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D Rpal_4741 NADH dehydrogenase I, D subunit K13378 nuoCD; NADH-quinone oxidoreductase subunit C/D [EC:7.1.1.2]
D Rpal_3295 NADH-quinone oxidoreductase, E subunit K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D Rpal_4740 NADH dehydrogenase (ubiquinone) 24 kDa subunit K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D Rpal_3293 NADH-quinone oxidoreductase, F subunit K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D Rpal_4739 NADH dehydrogenase (quinone) K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D Rpal_3292 NADH-quinone oxidoreductase, chain G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D Rpal_4738 NADH-quinone oxidoreductase, chain G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D Rpal_3291 NADH dehydrogenase (quinone) K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D Rpal_4737 NADH dehydrogenase (quinone) K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D Rpal_3290 NADH-quinone oxidoreductase, chain I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D Rpal_4736 NADH-quinone oxidoreductase, chain I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D Rpal_3289 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D Rpal_4735 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D Rpal_3288 NADH-ubiquinone oxidoreductase chain 4L K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D Rpal_4734 NADH-ubiquinone oxidoreductase chain 4L K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D Rpal_3287 proton-translocating NADH-quinone oxidoreductase, chain L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D Rpal_4733 proton-translocating NADH-quinone oxidoreductase, chain L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D Rpal_3286 proton-translocating NADH-quinone oxidoreductase, chain M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D Rpal_4732 proton-translocating NADH-quinone oxidoreductase, chain M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D Rpal_3285 proton-translocating NADH-quinone oxidoreductase, chain N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D Rpal_4731 NADH dehydrogenase (quinone) K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D Rpal_1294 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D Rpal_0216 succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D Rpal_0215 succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D Rpal_0218 succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D Rpal_0217 succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D Rpal_1384 ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D Rpal_1208 ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D Rpal_1385 cytochrome c1 K00410 fbcH; ubiquinol-cytochrome c reductase cytochrome b/c1 subunit
D Rpal_0901 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D Rpal_0904 cytochrome c oxidase subunit III K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D Rpal_0900 cytochrome c oxidase, subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D Rpal_0899 cytochrome c oxidase, subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D Rpal_0903 cytochrome c oxidase assembly protein CtaG/Cox11 K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D Rpal_3097 cytochrome oxidase assembly K02259 COX15; heme a synthase [EC:1.17.99.9]
D Rpal_0020 cytochrome c oxidase, cbb3-type, subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D Rpal_0019 cytochrome c oxidase, cbb3-type, subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D Rpal_0018 Cbb3-type cytochrome oxidase component K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D Rpal_0017 cytochrome c oxidase, cbb3-type, subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D Rpal_1533 cytochrome bd ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D Rpal_5279 cytochrome bd ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D Rpal_1534 cytochrome bd ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D Rpal_5280 cytochrome d ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D Rpal_1724 cytochrome c class I K08738 CYC; cytochrome c
D Rpal_4215 cytochrome c class I K08738 CYC; cytochrome c
D Rpal_0173 ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D Rpal_1050 ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D Rpal_0171 ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D Rpal_1057 ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D Rpal_0172 ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D Rpal_1049 H+transporting two-sector ATPase gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D Rpal_0174 ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D Rpal_0170 ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D Rpal_1056 alternate F1F0 ATPase, F1 subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D Rpal_0914 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D Rpal_1053 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D Rpal_0911 H+transporting two-sector ATPase B/B' subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D Rpal_0912 H+transporting two-sector ATPase B/B' subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D Rpal_1051 H+transporting two-sector ATPase B/B' subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D Rpal_0913 H+transporting two-sector ATPase C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D Rpal_1052 ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D Rpal_0415 Inorganic diphosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D Rpal_3458 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms [PATH:rpt00710]
D Rpal_5122 Ribulose-bisphosphate carboxylase K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39]
D Rpal_1747 Ribulose-bisphosphate carboxylase K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39]
D Rpal_0263 RiBisCO-like protein K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39]
D Rpal_1748 Ribulose-bisphosphate carboxylase K01602 rbcS; ribulose-bisphosphate carboxylase small chain [EC:4.1.1.39]
D Rpal_1013 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D Rpal_1014 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Rpal_1010 Fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D Rpal_5123 fructose-bisphosphate aldolase, class II, Calvin cycle subtype K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Rpal_5126 Inositol phosphatase/fructose-16-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D Rpal_2784 fructose-1,6-bisphosphatase, class II K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D Rpal_5124 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Rpal_1015 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Rpal_2194 ribose 5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D Rpal_5125 Phosphoribulokinase K00855 PRK; phosphoribulokinase [EC:2.7.1.19]
D Rpal_3233 Triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D Rpal_4340 Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D Rpal_1972 Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D Rpal_0363 Phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D Rpal_1243 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D Rpal_3452 Malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)), Phosphate acetyltransferase K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D Rpal_0187 malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
C 00720 Carbon fixation pathways in prokaryotes
C 00680 Methane metabolism [PATH:rpt00680]
D Rpal_4444 Alcohol dehydrogenase zinc-binding domain protein K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D Rpal_2166 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D Rpal_0805 formate dehydrogenase, alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D Rpal_0804 NADH dehydrogenase (quinone) K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D Rpal_0803 NADH dehydrogenase (ubiquinone) 24 kDa subunit K00127 fdoI; formate dehydrogenase subunit gamma
D Rpal_0807 putative NAD-dependent formate dehydrogenase K00126 fdsD; formate dehydrogenase subunit delta [EC:1.17.1.9]
D Rpal_0138 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K15022 fdhB; formate dehydrogenase (NADP+) beta subunit [EC:1.17.1.10]
D Rpal_3135 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Rpal_3004 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Rpal_0857 aminotransferase class V K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D Rpal_2000 Hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D Rpal_3216 Phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Rpal_1972 Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D Rpal_0187 malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D Rpal_1010 Fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D Rpal_5123 fructose-bisphosphate aldolase, class II, Calvin cycle subtype K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Rpal_5126 Inositol phosphatase/fructose-16-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D Rpal_2784 fructose-1,6-bisphosphatase, class II K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D Rpal_0383 1-phosphofructokinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
D Rpal_1688 coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein K00441 frhB; coenzyme F420 hydrogenase subunit beta [EC:1.12.98.1]
D Rpal_5046 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D Rpal_0209 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Rpal_2545 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Rpal_3934 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Rpal_0343 phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D Rpal_4789 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Rpal_1944 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Rpal_3323 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Rpal_4790 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D Rpal_2240 phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 00910 Nitrogen metabolism [PATH:rpt00910]
D Rpal_1448 Formamidase K01455 E3.5.1.49; formamidase [EC:3.5.1.49]
D Rpal_2134 Formamidase K01455 E3.5.1.49; formamidase [EC:3.5.1.49]
D Rpal_2403 ABC transporter nitrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D Rpal_2404 nitrate ABC transporter, inner membrane subunit K15577 nrtB; nitrate/nitrite transport system permease protein
D Rpal_2405 nitrate ABC transporter, ATPase subunits C and D K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D Rpal_4231 precorrin-3B synthase K00366 nirA; ferredoxin-nitrite reductase [EC:1.7.7.1]
D Rpal_4623 nitrite reductase, copper-containing K00368 nirK; nitrite reductase (NO-forming) [EC:1.7.2.1]
D Rpal_3727 nitrite reductase, copper-containing K00368 nirK; nitrite reductase (NO-forming) [EC:1.7.2.1]
D Rpal_1642 Nitric-oxide reductase K04561 norB; nitric oxide reductase subunit B [EC:1.7.2.5]
D Rpal_1641 nitric-oxide reductase, small subunit K02305 norC; nitric oxide reductase subunit C
D Rpal_2351 Nitrous-oxide reductase K00376 nosZ; nitrous-oxide reductase [EC:1.7.2.4]
D Rpal_5100 nitrogenase molybdenum-iron protein alpha chain K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]
D Rpal_1622 nitrogenase alpha chain K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]
D Rpal_2592 Nitrogenase K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]
D Rpal_2607 Nitrogenase K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]
D Rpal_2908 Nitrogenase K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]
D Rpal_2591 Nitrogenase K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]
D Rpal_5099 nitrogenase molybdenum-iron protein beta chain K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]
D Rpal_2888 oxidoreductase/nitrogenase component 1 K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]
D Rpal_2909 Nitrogenase K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]
D Rpal_1620 Fe-only nitrogenase, beta subunit K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]
D Rpal_2597 nitrogenase iron protein K02588 nifH; nitrogenase iron protein NifH
D Rpal_2886 Nitrogenase K02588 nifH; nitrogenase iron protein NifH
D Rpal_2907 nitrogenase iron protein K02588 nifH; nitrogenase iron protein NifH
D Rpal_5101 nitrogenase iron protein K02588 nifH; nitrogenase iron protein NifH
D Rpal_1623 nitrogenase iron protein K02588 nifH; nitrogenase iron protein NifH
D Rpal_1621 Fe-only nitrogenase, delta subunit K00531 anfG; nitrogenase delta subunit [EC:1.18.6.1]
D Rpal_5189 2-nitropropane dioxygenase NPD K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D Rpal_3522 2-nitropropane dioxygenase NPD K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D Rpal_4177 2-nitropropane dioxygenase NPD K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D Rpal_1586 2-nitropropane dioxygenase NPD K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D Rpal_4645 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D Rpal_1751 Nitrilase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D Rpal_1176 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Rpal_3315 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Rpal_4690 Glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Rpal_0959 Glutamate synthase (ferredoxin) K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D Rpal_5203 oxidoreductase FAD/NAD(P)-binding domain protein K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D Rpal_0960 glutamate synthase, NADH/NADPH, small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D Rpal_2406 cyanate lyase K01725 cynS; cyanate lyase [EC:4.2.1.104]
D Rpal_0231 Carbonate dehydratase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
D Rpal_0867 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
D Rpal_2034 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
D Rpal_2035 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
D Rpal_0862 Carbonate dehydratase K01674 cah; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:rpt00920]
D Rpal_0821 sulfate ABC transporter, periplasmic sulfate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D Rpal_0820 sulfate ABC transporter, inner membrane subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D Rpal_0819 sulfate ABC transporter, inner membrane subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D Rpal_0818 sulfate ABC transporter, ATPase subunit K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D Rpal_2879 aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D Rpal_2889 extracellular solute-binding protein family 3 K15553 ssuA; sulfonate transport system substrate-binding protein
D Rpal_2884 aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D Rpal_2895 aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D Rpal_1571 putative sulfate ester transporter, periplasmic binding component K15553 ssuA; sulfonate transport system substrate-binding protein
D Rpal_2902 ABC nitrate/sulfonate/bicarbonate family transporter, periplasmic ligand binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D Rpal_0952 putative substrate-binding component of ABC transporter K15553 ssuA; sulfonate transport system substrate-binding protein
D Rpal_2686 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D Rpal_2255 NMT1/THI5 like domain protein K15553 ssuA; sulfonate transport system substrate-binding protein
D Rpal_2882 binding-protein-dependent transport systems inner membrane component K15554 ssuC; sulfonate transport system permease protein
D Rpal_2894 binding-protein-dependent transport systems inner membrane component K15554 ssuC; sulfonate transport system permease protein
D Rpal_1572 binding-protein-dependent transport systems inner membrane component K15554 ssuC; sulfonate transport system permease protein
D Rpal_2903 binding-protein-dependent transport systems inner membrane component K15554 ssuC; sulfonate transport system permease protein
D Rpal_0950 binding-protein-dependent transport systems inner membrane component K15554 ssuC; sulfonate transport system permease protein
D Rpal_1584 binding-protein-dependent transport systems inner membrane component K15554 ssuC; sulfonate transport system permease protein
D Rpal_2254 binding-protein-dependent transport systems inner membrane component K15554 ssuC; sulfonate transport system permease protein
D Rpal_2687 binding-protein-dependent transport systems inner membrane component K15554 ssuC; sulfonate transport system permease protein
D Rpal_2881 ABC transporter related K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D Rpal_2893 ABC transporter related K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D Rpal_1573 ABC transporter related K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D Rpal_1583 ABC transporter related K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D Rpal_2904 ABC transporter related K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D Rpal_0951 ABC transporter related K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D Rpal_2688 ABC transporter related K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D Rpal_2253 ABC transporter related K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D Rpal_2883 Alkanesulfonate monooxygenase K04091 ssuD; alkanesulfonate monooxygenase [EC:1.14.14.5 1.14.14.34]
D Rpal_0824 sulfate adenylyltransferase, large subunit K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D Rpal_0823 phosphoadenosine phosphosulfate reductase K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D Rpal_1815 inositol monophosphatase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D Rpal_0822 phosphoadenosine phosphosulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D Rpal_4961 conserved hypothetical protein K17222 soxA; L-cysteine S-thiosulfotransferase [EC:2.8.5.2]
D Rpal_4962 hypothetical protein K17223 soxX; L-cysteine S-thiosulfotransferase [EC:2.8.5.2]
D Rpal_4960 conserved hypothetical protein K17226 soxY; sulfur-oxidizing protein SoxY
D Rpal_1576 conserved hypothetical protein K17226 soxY; sulfur-oxidizing protein SoxY
D Rpal_4959 Sulphur oxidation protein SoxZ K17227 soxZ; sulfur-oxidizing protein SoxZ
D Rpal_1575 Sulphur oxidation protein SoxZ K17227 soxZ; sulfur-oxidizing protein SoxZ
D Rpal_4958 5'-Nucleotidase domain protein K17224 soxB; S-sulfosulfanyl-L-cysteine sulfohydrolase [EC:3.1.6.20]
D Rpal_4957 oxidoreductase molybdopterin binding K17225 soxC; sulfane dehydrogenase subunit SoxC
D Rpal_4956 putative sulfite oxidase cytochrome subunit (SoxD) K22622 soxD; S-disulfanyl-L-cysteine oxidoreductase SoxD [EC:1.8.2.6]
D Rpal_4232 oxidoreductase FAD/NAD(P)-binding domain protein K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
D Rpal_4694 nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
D Rpal_1577 Flavocytochrome c sulphide dehydrogenase flavin-binding K17229 fccB; sulfide dehydrogenase [flavocytochrome c] flavoprotein chain [EC:1.8.2.3]
D Rpal_4952 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K17229 fccB; sulfide dehydrogenase [flavocytochrome c] flavoprotein chain [EC:1.8.2.3]
D Rpal_4953 Flavocytochrome c sulphide dehydrogenase flavin-binding K17229 fccB; sulfide dehydrogenase [flavocytochrome c] flavoprotein chain [EC:1.8.2.3]
D Rpal_1578 cytochrome c, class I K17230 fccA; cytochrome subunit of sulfide dehydrogenase
D Rpal_4133 Rhodanese domain protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D Rpal_1609 Serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D Rpal_3916 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D Rpal_2837 Pyridoxal-5'-phosphate-dependent protein beta subunit K01738 cysK; cysteine synthase [EC:2.5.1.47]
D Rpal_0559 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D Rpal_5070 Homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D Rpal_4925 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D Rpal_5251 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
D Rpal_3119 AMP-dependent synthetase and ligase K20034 dmdB; 3-(methylthio)propionyl---CoA ligase [EC:6.2.1.44]
D Rpal_4934 AMP-dependent synthetase and ligase K20034 dmdB; 3-(methylthio)propionyl---CoA ligase [EC:6.2.1.44]
D Rpal_1028 acyl-CoA dehydrogenase domain protein K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
D Rpal_0885 acyl-CoA dehydrogenase domain protein K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
D Rpal_1988 Enoyl-CoA hydratase/isomerase K20036 dmdD; (methylthio)acryloyl-CoA hydratase [EC:4.2.1.155]
D Rpal_3176 conserved hypothetical protein K21310 mddA; methanethiol S-methyltransferase [EC:2.1.1.334]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:rpt00061]
D Rpal_0509 acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D Rpal_2714 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D Rpal_2713 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D Rpal_0074 acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D Rpal_3483 acyl carrier protein K02078 acpP; acyl carrier protein
D Rpal_3485 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D Rpal_3020 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D Rpal_0430 Beta-ketoacyl synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D Rpal_2230 Beta-ketoacyl synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Rpal_2231 Beta-ketoacyl synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Rpal_3482 3-oxoacyl-(acyl-carrier-protein) synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Rpal_3484 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Rpal_3725 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Rpal_1879 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Rpal_2453 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Rpal_0963 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Rpal_0964 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Rpal_5077 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Rpal_5138 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Rpal_3838 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Rpal_0480 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Rpal_0429 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D Rpal_2232 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D Rpal_3258 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D Rpal_0431 short-chain dehydrogenase/reductase SDR K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D Rpal_1392 short-chain dehydrogenase/reductase SDR K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D Rpal_5048 short-chain dehydrogenase/reductase SDR K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D Rpal_4746 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Rpal_4572 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Rpal_1967 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Rpal_4237 dicarboxylate/CoA ligase PimA K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Rpal_1427 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Rpal_5310 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Rpal_2434 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Rpal_4908 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Rpal_1635 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:rpt00071]
D Rpal_3607 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rpal_0886 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rpal_1903 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rpal_4830 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rpal_0532 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rpal_2547 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rpal_3956 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rpal_1956 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rpal_4236 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rpal_0887 3-hydroxyacyl-CoA dehydrogenase NAD-binding K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D Rpal_2014 Enoyl-CoA hydratase/isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D Rpal_4238 3-hydroxyacyl-CoA dehydrogenase NAD-binding K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D Rpal_2548 acyl-CoA dehydrogenase domain protein K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D Rpal_0848 acyl-CoA dehydrogenase domain protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D Rpal_2429 acyl-CoA dehydrogenase domain protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D Rpal_4526 acyl-CoA dehydrogenase domain protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D Rpal_0481 acyl-CoA dehydrogenase domain protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D Rpal_1187 acyl-CoA dehydrogenase domain protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D Rpal_5033 acyl-CoA dehydrogenase domain protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D Rpal_5079 Acyl-CoA dehydrogenase type 2 domain K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D Rpal_0811 acyl-CoA dehydrogenase domain protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D Rpal_1908 acyl-CoA dehydrogenase domain protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D Rpal_1963 acyl-CoA dehydrogenase domain protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D Rpal_1802 acyl-CoA dehydrogenase domain protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D Rpal_3710 acyl-CoA dehydrogenase domain protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D Rpal_0482 acyl-CoA dehydrogenase domain protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D Rpal_1429 acyl-CoA dehydrogenase domain protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D Rpal_1284 acyl-CoA dehydrogenase domain protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D Rpal_4746 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Rpal_4572 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Rpal_1967 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Rpal_4237 dicarboxylate/CoA ligase PimA K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Rpal_1427 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Rpal_5310 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Rpal_2434 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Rpal_4908 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Rpal_1635 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Rpal_4303 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D Rpal_4444 Alcohol dehydrogenase zinc-binding domain protein K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D Rpal_2166 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D Rpal_4176 Alcohol dehydrogenase GroES domain protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D Rpal_0378 zinc-binding alcohol dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D Rpal_1398 iron-containing alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
D Rpal_3477 Alcohol dehydrogenase GroES domain protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D Rpal_2445 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:rpt00561]
D Rpal_2000 Hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D Rpal_2445 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Rpal_4226 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D Rpal_3019 fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D Rpal_3529 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D Rpal_5215 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D Rpal_2198 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D Rpal_4490 glycosyl transferase group 1 K27597 K27597; 1,2-diacylglycerol 3-alpha-glucosyltransferase/glucuronosyltransferase [EC:2.4.1.337 2.4.1.-]
C 00564 Glycerophospholipid metabolism [PATH:rpt00564]
D Rpal_0255 Glycerol-3-phosphate dehydrogenase (NAD(P)(+)) K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D Rpal_4895 FAD dependent oxidoreductase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D Rpal_3529 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D Rpal_5215 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D Rpal_2198 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D Rpal_0956 alpha/beta hydrolase fold K01048 pldB; lysophospholipase [EC:3.1.1.5]
D Rpal_4270 Ethanolamine ammonia lyase large subunit K03735 eutB; ethanolamine ammonia-lyase large subunit [EC:4.3.1.7]
D Rpal_4268 Ethanolamine ammonia-lyase K03736 eutC; ethanolamine ammonia-lyase small subunit [EC:4.3.1.7]
D Rpal_0338 ribosomal RNA adenine methylase transferase K00570 pmtA; phosphatidylethanolamine/phosphatidyl-N-methylethanolamine N-methyltransferase [EC:2.1.1.17 2.1.1.71]
D Rpal_1497 Phosphatidylethanolamine N-methyltransferase K00570 pmtA; phosphatidylethanolamine/phosphatidyl-N-methylethanolamine N-methyltransferase [EC:2.1.1.17 2.1.1.71]
D Rpal_3263 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D Rpal_2947 Phosphatidylcholine synthase K01004 pcs; phosphatidylcholine synthase [EC:2.7.8.24]
D Rpal_2218 CDP-diacylglycerol/serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D Rpal_2217 phosphatidylserine decarboxylase related protein K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D Rpal_3460 CDP-alcohol phosphatidyltransferase K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41]
D Rpal_1361 CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41]
D Rpal_0798 S-adenosylmethionine-diacylglycerol 3-amino-3-carboxypropyl transferase K13622 btaA; S-adenosylmethionine-diacylglycerol 3-amino-3-carboxypropyl transferase
D Rpal_0797 Methyltransferase type 12 K13623 btaB; S-adenosylmethionine-diacylgycerolhomoserine-N-methlytransferase
C 00565 Ether lipid metabolism
D Rpal_1454 FAD linked oxidase domain protein K00803 AGPS; alkyldihydroxyacetonephosphate synthase [EC:2.5.1.26]
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids [PATH:rpt01040]
D Rpal_0190 lipolytic protein G-D-S-L family K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D Rpal_0272 acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:rpt00230]
D Rpal_4209 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D Rpal_1671 phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D Rpal_3744 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D Rpal_4626 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D Rpal_4846 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D Rpal_3501 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D Rpal_1353 phosphoribosylamine/glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D Rpal_3462 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D Rpal_1786 phosphoribosylformylglycinamidine synthase II K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]
D Rpal_4346 phosphoribosylformylglycinamidine synthase, purS K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3]
D Rpal_4344 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D Rpal_3461 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D Rpal_4655 phosphoribosylaminoimidazole carboxylase, ATPase subunit K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D Rpal_4654 phosphoribosylaminoimidazole carboxylase, catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D Rpal_4347 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D Rpal_0560 Phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D Rpal_4343 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D Rpal_0029 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D Rpal_4990 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D Rpal_1025 5'-Nucleotidase domain protein K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D Rpal_3182 stationary-phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D Rpal_4844 protein of unknown function DUF152 K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D Rpal_2495 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D Rpal_3466 Nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D Rpal_0331 non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D Rpal_2473 Xanthine phosphoribosyltransferase K00769 gpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D Rpal_0422 glutamine amidotransferase class-I K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D Rpal_2498 GMP synthase, large subunit K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D Rpal_5041 IMP dehydrogenase/GMP reductase K00364 guaC; GMP reductase [EC:1.7.1.7]
D Rpal_3254 CMP/dCMP deaminase zinc-binding K01487 guaD; guanine deaminase [EC:3.5.4.3]
D Rpal_3479 Guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D Rpal_2639 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D Rpal_3325 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D Rpal_2638 Ribonucleoside-diphosphate reductase K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D Rpal_2642 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D Rpal_3195 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D Rpal_1253 metal dependent phosphohydrolase K06952 yfdR; 5'-nucleotidase [EC:3.1.3.89]
D Rpal_2968 (p)ppGpp synthetase I, SpoT/RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D Rpal_4183 metal dependent phosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D Rpal_3457 Ppx/GppA phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D Rpal_2489 Ppx/GppA phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D Rpal_2534 adenylate/guanylate cyclase with Chase sensor K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D Rpal_1770 adenylate/guanylate cyclase K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D Rpal_1395 adenylate/guanylate cyclase K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D Rpal_1999 adenylate/guanylate cyclase K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D Rpal_2176 adenylate/guanylate cyclase with integral membrane sensor K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D Rpal_4774 Adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D Rpal_4945 metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D Rpal_3646 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D Rpal_3151 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D Rpal_0128 metallophosphoesterase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
D Rpal_1667 metallophosphoesterase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
D Rpal_0127 metallophosphoesterase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
D Rpal_0824 sulfate adenylyltransferase, large subunit K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D Rpal_0823 phosphoadenosine phosphosulfate reductase K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D Rpal_0555 allantoin catabolism protein K14977 ylbA; (S)-ureidoglycine aminohydrolase [EC:3.5.3.26]
D Rpal_0556 Ureidoglycolate hydrolase K01483 allA; ureidoglycolate lyase [EC:4.3.2.3]
D Rpal_4182 urease, alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D Rpal_4184 urease, beta subunit K01429 ureB; urease subunit beta [EC:3.5.1.5]
D Rpal_4185 urease, gamma subunit K01430 ureA; urease subunit gamma [EC:3.5.1.5]
C 00240 Pyrimidine metabolism [PATH:rpt00240]
D Rpal_4605 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D Rpal_1470 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D Rpal_3527 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D Rpal_1257 dihydroorotase, multifunctional complex type K01465 URA4; dihydroorotase [EC:3.5.2.3]
D Rpal_3528 dihydroorotase, multifunctional complex type K01465 URA4; dihydroorotase [EC:3.5.2.3]
D Rpal_0865 Dihydroorotate oxidase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D Rpal_5205 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D Rpal_0340 orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D Rpal_3266 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D Rpal_3466 Nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D Rpal_3151 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D Rpal_0301 Maf family protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D Rpal_5018 maf protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D Rpal_3231 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D Rpal_0066 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D Rpal_1025 5'-Nucleotidase domain protein K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D Rpal_3182 stationary-phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D Rpal_4945 metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D Rpal_1291 CMP/dCMP deaminase zinc-binding K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D Rpal_2642 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D Rpal_5250 2-deoxycytidine 5-triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D Rpal_2639 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D Rpal_3325 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D Rpal_2638 Ribonucleoside-diphosphate reductase K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D Rpal_1253 metal dependent phosphohydrolase K06952 yfdR; 5'-nucleotidase [EC:3.1.3.89]
D Rpal_3114 dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D Rpal_0083 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D Rpal_4625 thymidine phosphorylase K00758 deoA; thymidine phosphorylase [EC:2.4.2.4]
D Rpal_4007 Thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D Rpal_1945 amidase, hydantoinase/carbamoylase family K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D Rpal_4764 nitroreductase K09019 rutE; 3-hydroxypropanoate dehydrogenase [EC:1.1.1.-]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:rpt00250]
D Rpal_4809 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Rpal_1246 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D Rpal_4592 asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D Rpal_0857 aminotransferase class V K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D Rpal_0397 Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D Rpal_5225 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D Rpal_4774 Adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D Rpal_4343 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D Rpal_3527 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D Rpal_2567 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D Rpal_0465 succinic semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Rpal_2568 succinic semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Rpal_0959 Glutamate synthase (ferredoxin) K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D Rpal_5203 oxidoreductase FAD/NAD(P)-binding domain protein K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D Rpal_0960 glutamate synthase, NADH/NADPH, small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D Rpal_1768 delta-1-pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D Rpal_1176 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Rpal_3315 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Rpal_4690 Glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Rpal_4605 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D Rpal_1470 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D Rpal_4692 Glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D Rpal_4344 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D Rpal_2934 glucosamine/fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D Rpal_3501 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:rpt00260]
D Rpal_0608 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Rpal_0229 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Rpal_2783 Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D Rpal_4750 homoserine kinase K02204 thrB2; homoserine kinase type II [EC:2.7.1.39]
D Rpal_0907 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D Rpal_1776 aromatic amino acid beta-eliminating lyase/threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D Rpal_2609 Threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D Rpal_3135 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Rpal_3004 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Rpal_0857 aminotransferase class V K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D Rpal_2000 Hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D Rpal_0343 phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D Rpal_4789 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Rpal_1944 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Rpal_3323 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Rpal_4790 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D Rpal_2240 phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D Rpal_1742 5-aminolevulinic acid synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37]
D Rpal_0922 5-aminolevulinic acid synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37]
D Rpal_0413 amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D Rpal_4375 glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D Rpal_4373 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Rpal_3205 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Rpal_0180 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Rpal_4374 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D Rpal_2218 CDP-diacylglycerol/serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D Rpal_2600 Pyridoxal-5'-phosphate-dependent protein beta subunit K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D Rpal_2601 Cystathionine gamma-synthase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D Rpal_4489 Pyridoxal-5'-phosphate-dependent protein beta subunit K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D Rpal_0073 tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D Rpal_0072 tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D Rpal_1782 pyridoxal-phosphate dependent TrpB-like enzyme K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:rpt00270]
D Rpal_1609 Serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D Rpal_3916 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D Rpal_2837 Pyridoxal-5'-phosphate-dependent protein beta subunit K01738 cysK; cysteine synthase [EC:2.5.1.47]
D Rpal_0559 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D Rpal_2601 Cystathionine gamma-synthase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D Rpal_2831 cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D Rpal_2600 Pyridoxal-5'-phosphate-dependent protein beta subunit K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D Rpal_4224 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D Rpal_2475 Methionine synthase vitamin-B12 independent K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D Rpal_2650 5-methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D Rpal_4546 Methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D Rpal_5308 methylthioadenosine phosphorylase K00772 mtaP; 5'-methylthioadenosine phosphorylase [EC:2.4.2.28]
D Rpal_4844 protein of unknown function DUF152 K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D Rpal_5307 translation initiation factor, aIF-2BI family K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23]
D Rpal_2596 Acireductone dioxygenase ARD K08967 mtnD; 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase [EC:1.13.11.53 1.13.11.54]
D Rpal_2462 RuBisCO-like protein K25035 rlp; S-methyl-5-thioribulose 1-phosphate isomerase [EC:5.3.3.23]
D Rpal_2463 Cupin 2 conserved barrel domain protein K01767 cupin; S-methyl-1-thioxylulose 5-phosphate methylthiotransferase [EC:2.8.4.6]
D Rpal_0375 methionine gamma-lyase K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11]
D Rpal_3927 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Rpal_0352 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Rpal_4545 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D Rpal_0608 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Rpal_0229 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Rpal_2783 Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D Rpal_5070 Homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D Rpal_4925 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D Rpal_3102 O-acetylhomoserine/O-acetylserine sulfhydrylase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D Rpal_1757 O-acetylhomoserine/O-acetylserine sulfhydrylase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D Rpal_2593 Cys/Met metabolism pyridoxal-phosphate-dependent protein K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D Rpal_2594 O-acetylhomoserine aminocarboxypropyltransferase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D Rpal_2606 O-acetylhomoserine/O-acetylserine sulfhydrylase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D Rpal_5071 O-acetylhomoserine/O-acetylserine sulfhydrylase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D Rpal_4730 O-acetylhomoserine/O-acetylserine sulfhydrylase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D Rpal_5251 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
D Rpal_4854 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Rpal_5073 aminotransferase class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Rpal_0890 glutamate/cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D Rpal_0324 glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D Rpal_4809 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Rpal_4133 Rhodanese domain protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D Rpal_0187 malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D Rpal_4789 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Rpal_1944 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Rpal_3323 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Rpal_4790 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:rpt00280]
D Rpal_4854 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Rpal_5073 aminotransferase class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Rpal_3205 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Rpal_0180 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Rpal_2548 acyl-CoA dehydrogenase domain protein K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D Rpal_0848 acyl-CoA dehydrogenase domain protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D Rpal_2429 acyl-CoA dehydrogenase domain protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D Rpal_4526 acyl-CoA dehydrogenase domain protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D Rpal_0481 acyl-CoA dehydrogenase domain protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D Rpal_1187 acyl-CoA dehydrogenase domain protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D Rpal_5033 acyl-CoA dehydrogenase domain protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D Rpal_5079 Acyl-CoA dehydrogenase type 2 domain K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D Rpal_0811 acyl-CoA dehydrogenase domain protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D Rpal_1908 acyl-CoA dehydrogenase domain protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D Rpal_1963 acyl-CoA dehydrogenase domain protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D Rpal_1802 acyl-CoA dehydrogenase domain protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D Rpal_3710 acyl-CoA dehydrogenase domain protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D Rpal_0482 acyl-CoA dehydrogenase domain protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D Rpal_1429 acyl-CoA dehydrogenase domain protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D Rpal_1804 acyl-CoA dehydrogenase domain protein K00253 IVD; isovaleryl-CoA dehydrogenase [EC:1.3.8.4]
D Rpal_2014 Enoyl-CoA hydratase/isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D Rpal_0887 3-hydroxyacyl-CoA dehydrogenase NAD-binding K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D Rpal_3585 Carbamoyl-phosphate synthase L chain ATP-binding K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3]
D Rpal_3618 carboxyl transferase K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D Rpal_3282 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D Rpal_2039 methylmalonyl-CoA mutase, large subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D Rpal_2041 Methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D Rpal_3935 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D Rpal_2186 6-phosphogluconate dehydrogenase NAD-binding K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D Rpal_2732 6-phosphogluconate dehydrogenase NAD-binding K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D Rpal_3940 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D Rpal_2445 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Rpal_0220 AMP-dependent synthetase and ligase K18661 matB; malonyl-CoA/methylmalonyl-CoA synthetase [EC:6.2.1.76 6.2.1.-]
D Rpal_1370 Beta-alanine--pyruvate transaminase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D Rpal_2567 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D Rpal_2809 Carbamoyl-phosphate synthase L chain ATP-binding K01968 MCCC1; 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4]
D Rpal_2808 Propionyl-CoA carboxylase K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4]
D Rpal_2810 pyruvate carboxyltransferase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D Rpal_4635 3-oxoacid CoA-transferase, A subunit K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D Rpal_4634 3-oxoacid CoA-transferase, B subunit K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D Rpal_3607 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rpal_0886 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rpal_1903 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rpal_4830 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rpal_0532 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rpal_2547 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rpal_3956 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rpal_1956 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rpal_4236 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:rpt00290]
D Rpal_4489 Pyridoxal-5'-phosphate-dependent protein beta subunit K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D Rpal_0240 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D Rpal_0234 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D Rpal_0226 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D Rpal_2212 thiamine pyrophosphate domain protein TPP-binding K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Rpal_2242 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Rpal_4440 thiamine pyrophosphate protein TPP binding domain protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Rpal_2570 thiamine pyrophosphate domain protein TPP-binding K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Rpal_1808 thiamine pyrophosphate domain protein TPP-binding K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Rpal_4284 thiamine pyrophosphate domain protein TPP-binding K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Rpal_2243 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D Rpal_2246 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D Rpal_1648 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D Rpal_2585 Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D Rpal_4854 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Rpal_5073 aminotransferase class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Rpal_2211 2-isopropylmalate synthase/homocitrate synthase family protein K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D Rpal_2259 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D Rpal_5146 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:rpt00300]
D Rpal_2783 Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D Rpal_0608 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Rpal_0229 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Rpal_1759 dihydrodipicolinate synthetase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D Rpal_3603 dihydrodipicolinate synthetase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D Rpal_3407 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D Rpal_0966 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D Rpal_2961 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D Rpal_0342 Dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D Rpal_0630 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D Rpal_5259 acetylornithine and succinylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D Rpal_2224 aminotransferase class I and II K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
D Rpal_0628 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D Rpal_0251 Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D Rpal_5223 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D Rpal_4053 UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D Rpal_4052 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:rpt00310]
D Rpal_0183 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D Rpal_3205 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Rpal_0180 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Rpal_1284 acyl-CoA dehydrogenase domain protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D Rpal_2014 Enoyl-CoA hydratase/isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D Rpal_0887 3-hydroxyacyl-CoA dehydrogenase NAD-binding K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D Rpal_3607 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rpal_0886 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rpal_1903 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rpal_4830 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rpal_0532 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rpal_2547 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rpal_3956 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rpal_1956 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rpal_4236 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rpal_2567 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D Rpal_0465 succinic semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Rpal_2568 succinic semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Rpal_2794 lysine 2,3-aminomutase YodO family protein K01843 kamA; lysine 2,3-aminomutase [EC:5.4.3.2]
D Rpal_2433 protein of unknown function DUF849 K18013 kce; 3-keto-5-aminohexanoate cleavage enzyme [EC:2.3.1.247]
D Rpal_2866 aminotransferase class IV K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D Rpal_4295 FAD dependent oxidoreductase K26064 amaD; D-lysine oxidase
D Rpal_2445 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00220 Arginine biosynthesis [PATH:rpt00220]
D Rpal_5258 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D Rpal_0397 Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D Rpal_5225 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D Rpal_5210 arginase K01476 rocF; arginase [EC:3.5.3.1]
D Rpal_1588 urea carboxylase K01941 uca; urea carboxylase [EC:6.3.4.6]
D Rpal_1587 allophanate hydrolase K01457 atzF; allophanate hydrolase [EC:3.5.1.54]
D Rpal_1651 allophanate hydrolase K01457 atzF; allophanate hydrolase [EC:3.5.1.54]
D Rpal_4182 urease, alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D Rpal_4184 urease, beta subunit K01429 ureB; urease subunit beta [EC:3.5.1.5]
D Rpal_4185 urease, gamma subunit K01430 ureA; urease subunit gamma [EC:3.5.1.5]
D Rpal_4692 Glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D Rpal_4344 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D Rpal_1176 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Rpal_3315 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Rpal_4690 Glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Rpal_4605 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D Rpal_1470 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D Rpal_4809 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Rpal_0595 arginine biosynthesis bifunctional protein ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D Rpal_4371 GCN5-related N-acetyltransferase K22476 K22476; N-acetylglutamate synthase [EC:2.3.1.1]
D Rpal_0633 acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D Rpal_2770 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D Rpal_5259 acetylornithine and succinylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D Rpal_2569 acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
D Rpal_3442 acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
C 00330 Arginine and proline metabolism [PATH:rpt00330]
D Rpal_0472 Creatininase K01470 E3.5.2.10; creatinine amidohydrolase [EC:3.5.2.10]
D Rpal_2341 Ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D Rpal_0938 Ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D Rpal_2445 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Rpal_0413 amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D Rpal_1900 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D Rpal_4149 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D Rpal_4481 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D Rpal_3322 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D Rpal_1934 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D Rpal_2668 Acetamidase/Formamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D Rpal_3929 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D Rpal_5210 arginase K01476 rocF; arginase [EC:3.5.3.1]
D Rpal_4253 aminotransferase class-III K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13]
D Rpal_4850 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D Rpal_1768 delta-1-pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D Rpal_0158 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D Rpal_0159 gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D Rpal_4151 proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D Rpal_4809 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Rpal_2866 aminotransferase class IV K00824 dat; D-alanine transaminase [EC:2.6.1.21]
C 00340 Histidine metabolism [PATH:rpt00340]
D Rpal_1340 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D Rpal_1341 tRNA synthetase class II (G H P and S) K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit
D Rpal_5186 phosphoribosyl-ATP diphosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]
D Rpal_0316 phosphoribosyl-ATP diphosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]
D Rpal_3871 Phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D Rpal_0314 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D Rpal_0313 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D Rpal_0315 imidazoleglycerol phosphate synthase, cyclase subunit K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D Rpal_0311 Imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D Rpal_4927 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Rpal_0973 histidinol-phosphate phosphatase K05602 hisN; histidinol-phosphatase [EC:3.1.3.15]
D Rpal_5022 Histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D Rpal_2445 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Rpal_0413 amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D Rpal_1794 methyltransferase K18911 egtD; L-histidine Nalpha-methyltransferase [EC:2.1.1.44]
C 00350 Tyrosine metabolism [PATH:rpt00350]
D Rpal_4809 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Rpal_4927 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Rpal_0005 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D Rpal_5153 homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D Rpal_5152 maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2]
D Rpal_5151 fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
D Rpal_4944 Pyridoxal-dependent decarboxylase K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105]
D Rpal_0413 amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D Rpal_4444 Alcohol dehydrogenase zinc-binding domain protein K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D Rpal_2166 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D Rpal_4176 Alcohol dehydrogenase GroES domain protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D Rpal_0378 zinc-binding alcohol dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D Rpal_1398 iron-containing alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
D Rpal_3477 Alcohol dehydrogenase GroES domain protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D Rpal_1859 3,4-dihydroxyphenylacetate 2,3-dioxygenase K00455 hpaD; 3,4-dihydroxyphenylacetate 2,3-dioxygenase [EC:1.13.11.15]
D Rpal_4281 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase K00151 hpaE; 5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase [EC:1.2.1.60]
D Rpal_5184 oxidoreductase domain protein K10219 ligC; 2-hydroxy-4-carboxymuconate semialdehyde hemiacetal dehydrogenase [EC:1.1.1.312]
D Rpal_4280 5-carboxymethyl-2-hydroxymuconate isomerase K01826 hpaF; 5-carboxymethyl-2-hydroxymuconate isomerase [EC:5.3.3.10]
D Rpal_3395 5-carboxymethyl-2-hydroxymuconate isomerase K01826 hpaF; 5-carboxymethyl-2-hydroxymuconate isomerase [EC:5.3.3.10]
D Rpal_4279 2-oxo-hepta-3-ene-1,7-dioic acid hydratase K02509 hpaH; 2-oxo-hept-3-ene-1,7-dioate hydratase [EC:4.2.1.-]
D Rpal_4276 HpcH/HpaI aldolase K02510 hpaI; 4-hydroxy-2-oxoheptanedioate aldolase [EC:4.1.2.52]
D Rpal_0465 succinic semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Rpal_2568 succinic semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Rpal_4083 Tryptophanase K01668 E4.1.99.2; tyrosine phenol-lyase [EC:4.1.99.2]
D Rpal_4515 fumarylacetoacetate (FAA) hydrolase K16165 nagK; fumarylpyruvate hydrolase [EC:3.7.1.20]
D Rpal_4277 Malate/L-lactate dehydrogenase K13574 hcxB; hydroxycarboxylate dehydrogenase B [EC:1.1.1.237 1.1.1.-]
C 00360 Phenylalanine metabolism [PATH:rpt00360]
D Rpal_4944 Pyridoxal-dependent decarboxylase K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105]
D Rpal_0413 amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D Rpal_1422 Phenylacetate--CoA ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30]
D Rpal_2684 phenylacetate--CoA ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30]
D Rpal_1613 Phenylacetate--CoA ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30]
D Rpal_1923 phenylacetate-CoA ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30]
D Rpal_1924 phenylacetic acid degradation protein PaaD K02614 paaI; acyl-CoA thioesterase [EC:3.1.2.-]
D Rpal_4289 phenylacetate-CoA oxygenase, PaaG subunit K02609 paaA; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA [EC:1.14.13.149]
D Rpal_4288 phenylacetate-CoA oxygenase, PaaH subunit K02610 paaB; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB
D Rpal_4287 phenylacetate-CoA oxygenase, PaaI subunit K02611 paaC; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaC [EC:1.14.13.149]
D Rpal_4286 phenylacetate-CoA oxygenase, PaaJ subunit K02612 paaD; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD
D Rpal_4285 phenylacetate-CoA oxygenase/reductase, PaaK subunit K02613 paaE; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE
D Rpal_1958 Enoyl-CoA hydratase/isomerase K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18]
D Rpal_0485 Enoyl-CoA hydratase/isomerase K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18]
D Rpal_1925 phenylacetic acid degradation protein paaN K02618 paaZ; oxepin-CoA hydrolase / 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase [EC:3.3.2.12 1.2.1.91]
D Rpal_2014 Enoyl-CoA hydratase/isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D Rpal_5230 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D Rpal_4809 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Rpal_4927 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Rpal_2621 GCN5-related N-acetyltransferase K03825 aaaT; L-phenylalanine/L-methionine N-acetyltransferase [EC:2.3.1.53 2.3.1.-]
D Rpal_0005 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D Rpal_2866 aminotransferase class IV K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D Rpal_4277 Malate/L-lactate dehydrogenase K13574 hcxB; hydroxycarboxylate dehydrogenase B [EC:1.1.1.237 1.1.1.-]
D Rpal_0433 catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21]
D Rpal_1900 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D Rpal_4149 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D Rpal_4481 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D Rpal_3322 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D Rpal_1934 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D Rpal_2668 Acetamidase/Formamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D Rpal_3929 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D Rpal_4303 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D Rpal_5156 monooxygenase FAD-binding K05712 mhpA; 3-(3-hydroxy-phenyl)propionate hydroxylase [EC:1.14.13.127]
C 00380 Tryptophan metabolism [PATH:rpt00380]
D Rpal_2955 conserved hypothetical protein K01432 AFMID; arylformamidase [EC:3.5.1.9]
D Rpal_3396 conserved hypothetical protein K01432 AFMID; arylformamidase [EC:3.5.1.9]
D Rpal_0183 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D Rpal_3205 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Rpal_0180 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Rpal_1284 acyl-CoA dehydrogenase domain protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D Rpal_2014 Enoyl-CoA hydratase/isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D Rpal_0887 3-hydroxyacyl-CoA dehydrogenase NAD-binding K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D Rpal_3607 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rpal_0886 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rpal_1903 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rpal_4830 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rpal_0532 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rpal_2547 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rpal_3956 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rpal_1956 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rpal_4236 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rpal_4944 Pyridoxal-dependent decarboxylase K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105]
D Rpal_0413 amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D Rpal_2445 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Rpal_3526 indolepyruvate/phenylpyruvate decarboxylase K04103 ipdC; indolepyruvate decarboxylase [EC:4.1.1.74]
D Rpal_4645 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D Rpal_1751 Nitrilase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D Rpal_3145 nitrile hydratase, alpha subunit K01721 nthA; nitrile hydratase subunit alpha [EC:4.2.1.84]
D Rpal_3146 Nitrile hydratase K20807 nthB; nitrile hydratase subunit beta [EC:4.2.1.84]
D Rpal_1900 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D Rpal_4149 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D Rpal_4481 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D Rpal_3322 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D Rpal_1934 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D Rpal_2668 Acetamidase/Formamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D Rpal_3929 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D Rpal_3732 Catalase K03781 katE; catalase [EC:1.11.1.6]
D Rpal_0433 catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:rpt00400]
D Rpal_2197 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D Rpal_0028 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D Rpal_0504 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D Rpal_2715 3-dehydroquinate dehydratase, type II K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D Rpal_4803 shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D Rpal_0505 Shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D Rpal_0064 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D Rpal_1394 Chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D Rpal_4991 anthranilate synthase K13503 trpEG; anthranilate synthase [EC:4.1.3.27]
D Rpal_3235 anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D Rpal_0071 Phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D Rpal_3236 Indole-3-glycerol-phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D Rpal_0073 tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D Rpal_0072 tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D Rpal_1782 pyridoxal-phosphate dependent TrpB-like enzyme K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D Rpal_4928 Prephenate dehydrogenase K00220 tyrC; cyclohexadieny/prephenate dehydrogenase [EC:1.3.1.43 1.3.1.12]
D Rpal_4217 Prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D Rpal_4809 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Rpal_4927 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:rpt00410]
D Rpal_2567 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D Rpal_2445 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Rpal_3564 pantoate/beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D Rpal_1945 amidase, hydantoinase/carbamoylase family K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D Rpal_1370 Beta-alanine--pyruvate transaminase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D Rpal_2014 Enoyl-CoA hydratase/isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D Rpal_0887 3-hydroxyacyl-CoA dehydrogenase NAD-binding K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D Rpal_2548 acyl-CoA dehydrogenase domain protein K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D Rpal_0562 Malonyl-CoA decarboxylase K01578 MLYCD; malonyl-CoA decarboxylase [EC:4.1.1.9]
D Rpal_3940 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
C 00430 Taurine and hypotaurine metabolism [PATH:rpt00430]
D Rpal_0026 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D Rpal_0844 Gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D Rpal_2575 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D Rpal_4906 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D Rpal_0117 protein of unknown function DUF1486 K07255 tauX; taurine dehydrogenase small subunit [EC:1.4.2.-]
D Rpal_0118 FAD dependent oxidoreductase K07256 tauY; taurine dehydrogenase large subunit [EC:1.4.2.-]
D Rpal_5046 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism [PATH:rpt00440]
D Rpal_4258 phosphonoacetate hydrolase K19670 phnA; phosphonoacetate hydrolase [EC:3.11.1.2]
D Rpal_0760 phosphonate metabolism K06164 phnI; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI [EC:2.7.8.37]
D Rpal_0762 phosphonate C-P lyase system protein PhnG K06166 phnG; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnG [EC:2.7.8.37]
D Rpal_0761 phosphonate C-P lyase system protein PhnH K06165 phnH; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnH [EC:2.7.8.37]
D Rpal_0757 phosphonate C-P lyase system protein PhnL K05780 phnL; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnL [EC:2.7.8.37]
D Rpal_0770 phosphonate metabolism protein PhnM K06162 phnM; alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase [EC:3.6.1.63]
D Rpal_0756 phosphonate metabolism protein PhnM K06162 phnM; alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase [EC:3.6.1.63]
D Rpal_0759 phosphonate metabolism PhnJ K06163 phnJ; alpha-D-ribose 1-methylphosphonate 5-phosphate C-P lyase [EC:4.7.1.1]
D Rpal_3118 conserved hypothetical protein K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]
C 00450 Selenocompound metabolism [PATH:rpt00450]
D Rpal_2831 cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D Rpal_4224 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D Rpal_2475 Methionine synthase vitamin-B12 independent K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D Rpal_2650 5-methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D Rpal_2601 Cystathionine gamma-synthase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D Rpal_0375 methionine gamma-lyase K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11]
D Rpal_1608 cysteine desulfurase, SufS subfamily K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D Rpal_2745 cysteine desulfurase, SufS subfamily K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D Rpal_4609 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D Rpal_5027 cyclic nucleotide-regulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D Rpal_4475 Thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D Rpal_0824 sulfate adenylyltransferase, large subunit K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D Rpal_0823 phosphoadenosine phosphosulfate reductase K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D Rpal_3116 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:rpt00460]
D Rpal_1936 beta-galactosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D Rpal_4645 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D Rpal_1751 Nitrilase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D Rpal_0026 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D Rpal_0844 Gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D Rpal_2575 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D Rpal_4906 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D Rpal_3135 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Rpal_3004 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Rpal_1448 Formamidase K01455 E3.5.1.49; formamidase [EC:3.5.1.49]
D Rpal_2134 Formamidase K01455 E3.5.1.49; formamidase [EC:3.5.1.49]
C 00470 D-Amino acid metabolism [PATH:rpt00470]
D Rpal_3495 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D Rpal_2866 aminotransferase class IV K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D Rpal_4043 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Rpal_4692 Glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D Rpal_4344 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D Rpal_1780 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D Rpal_4050 UDP-N-acetylmuramoylalanine/D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D Rpal_4486 Mandelate racemase/muconate lactonizing protein K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25]
D Rpal_0251 Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D Rpal_5223 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:rpt00480]
D Rpal_0026 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D Rpal_0844 Gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D Rpal_2575 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D Rpal_4906 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D Rpal_5214 ChaC family protein K07232 CHAC; glutathione-specific gamma-glutamylcyclotransferase [EC:4.3.2.7]
D Rpal_2956 LamB/YcsF family protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D Rpal_2957 urea amidolyase related protein K23124 pxpC; 5-oxoprolinase (ATP-hydrolysing) subunit C [EC:3.5.2.9]
D Rpal_0890 glutamate/cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D Rpal_0324 glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D Rpal_3470 Leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D Rpal_4207 Leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D Rpal_0888 Glutathione S-transferase domain K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D Rpal_0024 Glutathione S-transferase domain K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D Rpal_0044 Glutathione S-transferase domain K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D Rpal_4403 Glutathione S-transferase domain K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D Rpal_2508 Glutathione S-transferase domain K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D Rpal_4794 Glutathione S-transferase domain K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D Rpal_4810 Glutathione S-transferase domain K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D Rpal_3568 Glutathione S-transferase domain K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D Rpal_4913 Glutathione S-transferase domain K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D Rpal_5299 membrane-associated protein in eicosanoid and glutathione metabolism (MAPEG) K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D Rpal_2196 glutathione-disulfide reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D Rpal_4362 isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D Rpal_4156 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D Rpal_4157 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D Rpal_4148 Glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D Rpal_4747 Redoxin domain protein K24138 prx3; glutaredoxin/glutathione-dependent peroxiredoxin [EC:1.11.1.25 1.11.1.27]
D Rpal_2341 Ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D Rpal_0938 Ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis [PATH:rpt00540]
D Rpal_3257 acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D Rpal_4039 UDP-3-0-acyl N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D Rpal_3259 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D Rpal_3256 protein of unknown function DUF1009 K09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D Rpal_3255 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D Rpal_1350 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D Rpal_0947 KpsF/GutQ family protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D Rpal_3223 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D Rpal_4216 3-deoxy-D-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D Rpal_1349 Three-deoxy-D-manno-octulosonic-acid transferase domain protein K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D Rpal_2228 lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D Rpal_4510 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D Rpal_4507 rfaE bifunctional protein K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D Rpal_4511 histidinol-phosphate phosphatase family protein K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D Rpal_4508 ADP-L-glycero-D-manno-heptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D Rpal_4512 lipopolysaccharide heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D Rpal_4509 lipopolysaccharide heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D Rpal_2805 glycosyl transferase group 1 K02844 waaG; UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-]
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:rpt00541]
D Rpal_0955 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Rpal_4513 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Rpal_5062 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Rpal_4548 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D Rpal_4503 NAD-dependent epimerase/dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D Rpal_0123 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Rpal_4448 NAD-dependent epimerase/dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D Rpal_0120 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D Rpal_0121 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D Rpal_0122 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D Rpal_4585 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D Rpal_3745 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D Rpal_4472 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D Rpal_4473 NAD-dependent epimerase/dehydratase K15856 rmd; GDP-4-dehydro-6-deoxy-D-mannose reductase [EC:1.1.1.281]
D Rpal_2933 UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D Rpal_4578 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D Rpal_4586 polysaccharide biosynthesis protein CapD K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-]
C 00550 Peptidoglycan biosynthesis [PATH:rpt00550]
D Rpal_5024 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D Rpal_4046 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D Rpal_4047 UDP-N-acetylmuramate/alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D Rpal_4050 UDP-N-acetylmuramoylalanine/D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D Rpal_4053 UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D Rpal_4043 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Rpal_4052 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D Rpal_3264 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D Rpal_0045 undecaprenol kinase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D Rpal_4051 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D Rpal_4048 Undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D Rpal_0526 monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D Rpal_2073 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Rpal_2730 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Rpal_0580 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Rpal_2824 penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D Rpal_4054 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D Rpal_3113 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
C 00552 Teichoic acid biosynthesis [PATH:rpt00552]
D Rpal_0045 undecaprenol kinase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D Rpal_5063 glycosyl transferase, WecB/TagA/CpsF family K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:rpt00543]
D Rpal_0267 membrane bound O-acyl transferase MBOAT family protein K19294 algI; alginate O-acetyltransferase complex protein AlgI
D Rpal_2846 membrane bound O-acyl transferase MBOAT family protein K19294 algI; alginate O-acetyltransferase complex protein AlgI
D Rpal_3532 membrane bound O-acyl transferase MBOAT family protein K19294 algI; alginate O-acetyltransferase complex protein AlgI
D Rpal_1609 Serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D Rpal_3916 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D Rpal_3779 Undecaprenyl-phosphate galactose phosphotransferase K16566 exoY; exopolysaccharide production protein ExoY
D Rpal_3771 acyltransferase 3 K16568 exoZ; exopolysaccharide production protein ExoZ
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:rpt00730]
D Rpal_4096 thiamine biosynthesis protein ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D Rpal_4493 phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D Rpal_5089 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Rpal_2741 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Rpal_4092 FAD dependent oxidoreductase K03153 thiO; glycine oxidase [EC:1.4.3.19]
D Rpal_1022 deoxyxylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D Rpal_4094 thiazole biosynthesis family protein K03149 thiG; thiazole synthase [EC:2.8.1.10]
D Rpal_4095 Thiamine-phosphate diphosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D Rpal_1009 thiamine monophosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D Rpal_3011 thiamine-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D Rpal_0396 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D Rpal_3646 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:rpt00740]
D Rpal_1283 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D Rpal_3006 riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D Rpal_4847 67-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D Rpal_3008 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D Rpal_3007 riboflavin synthase, alpha subunit K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D Rpal_4863 riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D Rpal_0782 cob(II)yrinic acid a,c-diamide reductase K04719 bluB; 5,6-dimethylbenzimidazole synthase [EC:1.13.11.79]
D Rpal_4209 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D Rpal_1000 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00750 Vitamin B6 metabolism [PATH:rpt00750]
D Rpal_1389 pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D Rpal_3138 pyridoxal kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D Rpal_4790 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D Rpal_3475 4-hydroxythreonine-4-phosphate dehydrogenase K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D Rpal_2969 pyridoxal phosphate biosynthetic protein PdxJ K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D Rpal_0907 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:rpt00760]
D Rpal_1246 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D Rpal_1247 quinolinate synthetase complex, A subunit K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D Rpal_1245 nicotinate-nucleotide pyrophosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D Rpal_1025 5'-Nucleotidase domain protein K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D Rpal_3182 stationary-phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D Rpal_0160 nicotinate (nicotinamide) nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D Rpal_3151 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D Rpal_0617 NUDIX hydrolase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D Rpal_2199 NAD+ synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D Rpal_2859 CinA domain protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D Rpal_1897 CinA domain protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D Rpal_2800 Silent information regulator protein Sir2 K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D Rpal_3856 NAD(+) kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D Rpal_4661 NAD(P) transhydrogenase subunit alpha part K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D Rpal_4662 NAD(P)(+) transhydrogenase (AB-specific) K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D Rpal_4660 NAD(P)(+) transhydrogenase (AB-specific) K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
D Rpal_0465 succinic semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Rpal_2568 succinic semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:rpt00770]
D Rpal_2212 thiamine pyrophosphate domain protein TPP-binding K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Rpal_2242 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Rpal_4440 thiamine pyrophosphate protein TPP binding domain protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Rpal_2570 thiamine pyrophosphate domain protein TPP-binding K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Rpal_1808 thiamine pyrophosphate domain protein TPP-binding K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Rpal_4284 thiamine pyrophosphate domain protein TPP-binding K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Rpal_2243 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D Rpal_2246 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D Rpal_1648 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D Rpal_2585 Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D Rpal_3508 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D Rpal_2153 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D Rpal_5042 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D Rpal_0021 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D Rpal_3564 pantoate/beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D Rpal_0317 pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33]
D Rpal_0084 phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D Rpal_3151 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D Rpal_2871 pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D Rpal_0302 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D Rpal_2970 holo-acyl-carrier-protein synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D Rpal_3758 4'-phosphopantetheinyl transferase K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-]
D Rpal_4854 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Rpal_5073 aminotransferase class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Rpal_1945 amidase, hydantoinase/carbamoylase family K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D Rpal_2445 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00780 Biotin metabolism [PATH:rpt00780]
D Rpal_0430 Beta-ketoacyl synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D Rpal_2230 Beta-ketoacyl synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Rpal_2231 Beta-ketoacyl synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Rpal_3482 3-oxoacyl-(acyl-carrier-protein) synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Rpal_3484 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Rpal_3725 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Rpal_1879 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Rpal_2453 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Rpal_0963 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Rpal_0964 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Rpal_5077 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Rpal_5138 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Rpal_3838 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Rpal_0480 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Rpal_2232 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D Rpal_3258 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D Rpal_0431 short-chain dehydrogenase/reductase SDR K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D Rpal_1392 short-chain dehydrogenase/reductase SDR K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D Rpal_5048 short-chain dehydrogenase/reductase SDR K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D Rpal_3320 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D Rpal_3318 adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D Rpal_3319 dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D Rpal_2257 biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D Rpal_3284 biotin/acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:rpt00785]
D Rpal_3579 lipoate-protein ligase B K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D Rpal_2857 lipoic acid synthetase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D Rpal_3205 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Rpal_0180 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Rpal_3209 pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D Rpal_3208 Transketolase central region K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D Rpal_3206 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D Rpal_0184 2-oxoglutarate dehydrogenase, E1 subunit K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D Rpal_0183 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D Rpal_4375 glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D Rpal_4373 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Rpal_4374 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:rpt00790]
D Rpal_3872 GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D Rpal_0396 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D Rpal_5006 Alkaline phosphatase K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D Rpal_2043 dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D Rpal_2042 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D Rpal_2044 dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D Rpal_4006 Dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D Rpal_0075 FolC bifunctional protein K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D Rpal_1283 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D Rpal_1854 queuosine biosynthesis protein QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D Rpal_0408 transcriptional coactivator/pterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D Rpal_1382 conserved hypothetical protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D Rpal_3150 exsB protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D Rpal_3217 7-cyano-7-deazaguanine reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D Rpal_2191 molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D Rpal_3237 molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D Rpal_1359 molybdopterin biosynthesis MoaE protein K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D Rpal_1220 molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D Rpal_3248 molybdenum cofactor synthesis domain protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D Rpal_4320 4-diphosphocytidyl-2C-methyl-D-erythritol synthase K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76]
D Rpal_4175 molybdopterin-guanine dinucleotide biosynthesis protein A K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:rpt00670]
D Rpal_4006 Dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D Rpal_0417 Methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D Rpal_3135 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Rpal_3004 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Rpal_3462 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D Rpal_0029 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D Rpal_0626 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D Rpal_4373 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Rpal_4224 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D Rpal_4007 Thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D Rpal_4562 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D Rpal_4223 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D Rpal_4946 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:rpt00860]
D Rpal_1742 5-aminolevulinic acid synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37]
D Rpal_0922 5-aminolevulinic acid synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37]
D Rpal_3252 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Rpal_2988 Porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D Rpal_1692 porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D Rpal_0257 Uroporphyrinogen III synthase HEM4 K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D Rpal_4563 Uroporphyrinogen III synthase HEM4 K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D Rpal_1696 uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D Rpal_1701 Coproporphyrinogen oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D Rpal_1862 oxygen-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D Rpal_0299 conserved hypothetical protein K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-]
D Rpal_0943 Ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D Rpal_4696 uroporphyrin-III C-methyltransferase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4]
D Rpal_2372 uroporphyrin-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D Rpal_0901 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D Rpal_3097 cytochrome oxidase assembly K02259 COX15; heme a synthase [EC:1.17.99.9]
D Rpal_2379 precorrin-2 C20-methyltransferase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151]
D Rpal_2378 precorrin-3B C17-methyltransferase K05934 cobJ; precorrin-3B C17-methyltransferase / cobalt-factor III methyltransferase [EC:2.1.1.131 2.1.1.272]
D Rpal_2374 precorrin-4 C11-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271]
D Rpal_2375 putative CobE protein K02189 cbiG; cobalt-precorrin 5A hydrolase [EC:3.7.1.12]
D Rpal_2387 precorrin-6A synthase (deacetylating) K02228 cobF; precorrin-6A synthase [EC:2.1.1.152]
D Rpal_2377 Precorrin-6A reductase K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106]
D Rpal_2376 precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit K00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase / cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196]
D Rpal_2380 Precorrin-8X methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60]
D Rpal_2373 cobyrinic acid a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D Rpal_0787 cobaltochelatase, CobN subunit K02230 cobN; cobaltochelatase CobN [EC:6.6.1.2]
D Rpal_2652 Cobaltochelatase K02230 cobN; cobaltochelatase CobN [EC:6.6.1.2]
D Rpal_0499 cobalt chelatase, pCobS small subunit K09882 cobS; cobaltochelatase CobS [EC:6.6.1.2]
D Rpal_0497 cobalt chelatase, pCobT subunit K09883 cobT; cobaltochelatase CobT [EC:6.6.1.2]
D Rpal_5233 ATP/cobalamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D Rpal_0788 cob(I)alamin adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D Rpal_2386 cobyric acid synthase CobQ K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D Rpal_0789 cobyric acid synthase CobQ K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D Rpal_0790 cobalamin biosynthesis protein CobD K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D Rpal_0792 L-threonine-O-3-phosphate decarboxylase K02225 cobC1; cobalamin biosynthesis protein CobC
D Rpal_0785 Adenosylcobinamide-phosphate guanylyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D Rpal_1450 cobalamin 5'-phosphate synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D Rpal_2385 cobalamin-5-phosphate synthase CobS K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D Rpal_2384 nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D Rpal_0783 nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D Rpal_1185 Phosphoglycerate mutase K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73]
D Rpal_1732 magnesium chelatase, H subunit K03403 chlH; magnesium chelatase subunit H [EC:6.6.1.1]
D Rpal_1694 magnesium chelatase ATPase subunit D K03404 chlD; magnesium chelatase subunit D [EC:6.6.1.1]
D Rpal_1693 magnesium chelatase ATPase subunit I K03405 chlI; magnesium chelatase subunit I [EC:6.6.1.1]
D Rpal_1734 magnesium protoporphyrin O-methyltransferase K03428 bchM; magnesium-protoporphyrin O-methyltransferase [EC:2.1.1.11]
D Rpal_1864 magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase K04034 bchE; anaerobic magnesium-protoporphyrin IX monomethyl ester cyclase [EC:1.21.98.3]
D Rpal_1740 magnesium-protoporphyrin IX monomethyl ester aerobic oxidative cyclase K04035 E1.14.13.81; magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase [EC:1.14.13.81]
D Rpal_1863 bacteriochlorophyll 4-vinyl reductase K04036 bchJ; divinyl protochlorophyllide a 8-vinyl-reductase [EC:1.-.-.-]
D Rpal_1733 light-independent protochlorophyllide reductase, iron-sulfur ATP-binding protein K04037 chlL; light-independent protochlorophyllide reductase subunit L [EC:1.3.7.7]
D Rpal_1730 light-independent protochlorophyllide reductase, N subunit K04038 chlN; light-independent protochlorophyllide reductase subunit N [EC:1.3.7.7]
D Rpal_1731 light-independent protochlorophyllide reductase, B subunit K04039 chlB; light-independent protochlorophyllide reductase subunit B [EC:1.3.7.7]
D Rpal_1719 bacteriochlorophyll/chlorophyll synthetase K04040 chlG; chlorophyll/bacteriochlorophyll a synthase [EC:2.5.1.62 2.5.1.133]
D Rpal_1710 chlorophyllide reductase iron protein subunit X K11333 bchX; 3,8-divinyl chlorophyllide a/chlorophyllide a reductase subunit X [EC:1.3.7.14 1.3.7.15]
D Rpal_1711 chlorophyllide reductase subunit Y K11334 bchY; 3,8-divinyl chlorophyllide a/chlorophyllide a reductase subunit Y [EC:1.3.7.14 1.3.7.15]
D Rpal_1712 chlorophyllide reductase subunit Z K11335 bchZ; 3,8-divinyl chlorophyllide a/chlorophyllide a reductase subunit Z [EC:1.3.7.14 1.3.7.15]
D Rpal_1729 2-vinyl bacteriochlorophyllide hydratase K11336 bchF; 3-vinyl bacteriochlorophyllide hydratase [EC:4.2.1.165]
D Rpal_1709 chlorophyll synthesis pathway, BchC K11337 bchC; bacteriochlorophyllide a dehydrogenase [EC:1.1.1.396]
D Rpal_1721 geranylgeranyl reductase K10960 chlP; geranylgeranyl diphosphate/geranylgeranyl-bacteriochlorophyllide a reductase [EC:1.3.1.83 1.3.1.111]
D Rpal_3698 Haem oxygenase-like protein K07215 pigA; heme oxygenase (biliverdin-IX-beta and delta-forming) [EC:1.14.99.58]
D Rpal_0362 pyridoxamine 5'-phosphate oxidase-related FMN-binding K07226 hutZ; heme oxygenase (biliverdin-IX-beta and delta-forming) [EC:1.14.99.58]
D Rpal_1727 Heme oxygenase K21480 HO; heme oxygenase (biliverdin-producing, ferredoxin) [EC:1.14.15.20]
D Rpal_4120 bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:rpt00130]
D Rpal_1990 thioesterase superfamily protein K01075 E3.1.2.23; 4-hydroxybenzoyl-CoA thioesterase [EC:3.1.2.23]
D Rpal_1344 4-hydroxybenzoate polyprenyl transferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D Rpal_1001 UbiD family decarboxylase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98]
D Rpal_1000 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D Rpal_0607 ubiquinone biosynthesis O-methyltransferase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
D Rpal_0271 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
D Rpal_2946 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
D Rpal_0086 ubiquinone/menaquinone biosynthesis methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D Rpal_5228 Ribosyldihydronicotinamide dehydrogenase (quinone) K00355 NQO1; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D Rpal_0979 flavoprotein WrbA K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D Rpal_2976 NmrA family protein K19267 qorB; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D Rpal_0005 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:rpt00900]
D Rpal_1022 deoxyxylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D Rpal_3262 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D Rpal_2860 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K12506 ispDF; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase / 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:2.7.7.60 4.6.1.12]
D Rpal_1231 4-diphosphocytidyl-2C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D Rpal_0520 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D Rpal_4255 hydroxymethylbutenyl pyrophosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D Rpal_4751 hydroxymethylbutenyl pyrophosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D Rpal_3607 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rpal_0886 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rpal_1903 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rpal_4830 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rpal_0532 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rpal_2547 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rpal_3956 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rpal_1956 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rpal_4236 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rpal_1000 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D Rpal_0525 Polyprenyl synthetase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D Rpal_1707 Polyprenyl synthetase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D Rpal_1232 Polyprenyl synthetase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D Rpal_3264 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D Rpal_1721 geranylgeranyl reductase K10960 chlP; geranylgeranyl diphosphate/geranylgeranyl-bacteriochlorophyllide a reductase [EC:1.3.1.83 1.3.1.111]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis [PATH:rpt00909]
D Rpal_4261 squalene-hopene cyclase K06045 shc; squalene-hopene/tetraprenyl-beta-curcumene cyclase [EC:5.4.99.17 4.2.1.129]
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis [PATH:rpt00906]
D Rpal_1700 Squalene/phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D Rpal_3169 putative phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D Rpal_1699 phytoene desaturase K10027 crtI; phytoene desaturase [EC:1.3.99.26 1.3.99.28 1.3.99.29 1.3.99.31]
D Rpal_1705 hydroxyneurosporene synthase K09844 crtC; carotenoid 1,2-hydratase [EC:4.2.1.131]
D Rpal_1706 phytoene desaturase K09845 crtD; 1-hydroxycarotenoid 3,4-desaturase [EC:1.3.99.27]
D Rpal_1708 O-methyltransferase family 2 K09846 crtF; demethylspheroidene O-methyltransferase [EC:2.1.1.210]
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
D Rpal_2445 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00907 Pinene, camphor and geraniol degradation [PATH:rpt00907]
D Rpal_2014 Enoyl-CoA hydratase/isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D Rpal_0887 3-hydroxyacyl-CoA dehydrogenase NAD-binding K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D Rpal_0025 short-chain dehydrogenase/reductase SDR K13775 atuG; citronellol/citronellal dehydrogenase
D Rpal_2430 acyl-CoA dehydrogenase domain protein K11731 atuD; citronellyl-CoA dehydrogenase [EC:1.3.99.-]
D Rpal_2436 Carbamoyl-phosphate synthase L chain ATP-binding K13777 atuF; geranyl-CoA carboxylase alpha subunit [EC:6.4.1.5]
D Rpal_2435 Propionyl-CoA carboxylase K13778 atuC; geranyl-CoA carboxylase beta subunit [EC:6.4.1.5]
D Rpal_2810 pyruvate carboxyltransferase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D Rpal_5124 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Rpal_1015 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:rpt00523]
D Rpal_0123 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Rpal_4448 NAD-dependent epimerase/dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D Rpal_0120 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D Rpal_0121 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D Rpal_0122 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D Rpal_4585 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides [PATH:rpt01053]
D Rpal_2628 Xylose isomerase domain protein TIM barrel K15652 asbF; 3-dehydroshikimate dehydratase [EC:4.2.1.118]
D Rpal_2632 IucA/IucC family protein K24108 asbA; spermidine-citrate ligase [EC:6.3.2.-]
D Rpal_2631 IucA/IucC family protein K24109 asbB; 3,4-dihydroxybenzoyl-citryl-spermidine/N-citryl-spermidine--spermidine ligase [EC:6.3.2.-]
D Rpal_2630 AMP-dependent synthetase and ligase K24110 asbC; 3,4-dihydroxybenzoate---[aryl-carrier protein] ligase [EC:6.2.1.62]
D Rpal_2629 conserved hypothetical protein K24112 asbE; petrobactin synthase [EC:2.-.-.-]
C 01055 Biosynthesis of vancomycin group antibiotics
D Rpal_4448 NAD-dependent epimerase/dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D Rpal_0120 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:rpt00946]
D Rpal_1936 beta-galactosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
D Rpal_0366 Beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
C 00332 Carbapenem biosynthesis [PATH:rpt00332]
D Rpal_0158 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D Rpal_0159 gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:rpt00261]
D Rpal_0824 sulfate adenylyltransferase, large subunit K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D Rpal_0823 phosphoadenosine phosphosulfate reductase K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D Rpal_0608 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Rpal_0229 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Rpal_1759 dihydrodipicolinate synthetase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D Rpal_3603 dihydrodipicolinate synthetase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D Rpal_3407 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D Rpal_0966 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D Rpal_2961 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D Rpal_0342 Dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:rpt00521]
D Rpal_1671 phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D Rpal_3744 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D Rpal_1007 Inositol-phosphate phosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D Rpal_1347 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D Rpal_0123 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Rpal_4448 NAD-dependent epimerase/dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D Rpal_0120 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D Rpal_0121 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D Rpal_0122 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D Rpal_4585 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
C 00525 Acarbose and validamycin biosynthesis [PATH:rpt00525]
D Rpal_0123 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Rpal_4448 NAD-dependent epimerase/dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D Rpal_0120 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:rpt00401]
D Rpal_4928 Prephenate dehydrogenase K00220 tyrC; cyclohexadieny/prephenate dehydrogenase [EC:1.3.1.43 1.3.1.12]
D Rpal_4809 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Rpal_4927 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis [PATH:rpt00405]
D Rpal_3592 phenazine biosynthesis protein PhzF family K06998 phzF; trans-2,3-dihydro-3-hydroxyanthranilate isomerase [EC:5.3.3.17]
D Rpal_4108 monooxygenase FAD-binding K20940 phzS; 5-methylphenazine-1-carboxylate 1-monooxygenase [EC:1.14.13.218]
C 00333 Prodigiosin biosynthesis
D Rpal_3485 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D Rpal_3484 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Rpal_3725 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Rpal_1879 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Rpal_2453 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Rpal_0963 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Rpal_0964 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Rpal_5077 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Rpal_5138 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Rpal_3838 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Rpal_0480 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Rpal_0431 short-chain dehydrogenase/reductase SDR K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D Rpal_1392 short-chain dehydrogenase/reductase SDR K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D Rpal_5048 short-chain dehydrogenase/reductase SDR K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D Rpal_3483 acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:rpt00999]
D Rpal_4546 Methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D Rpal_4803 shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D Rpal_1936 beta-galactosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:rpt00362]
D Rpal_0514 beta-ketoadipyl CoA thiolase K07823 pcaF; 3-oxoadipyl-CoA thiolase [EC:2.3.1.174]
D Rpal_1368 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D Rpal_4629 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D Rpal_3581 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D Rpal_2441 intradiol ring-cleavage dioxygenase K04098 chqB; hydroxyquinol 1,2-dioxygenase [EC:1.13.11.37]
D Rpal_5309 iron-containing alcohol dehydrogenase K00217 E1.3.1.32; maleylacetate reductase [EC:1.3.1.32]
D Rpal_5286 Carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D Rpal_5222 Carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D Rpal_1515 Carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D Rpal_5182 protocatechuate 4,5-dioxygenase, alpha subunit K04100 ligA; protocatechuate 4,5-dioxygenase, alpha chain [EC:1.13.11.8]
D Rpal_1198 Extradiol ring-cleavage dioxygenase LigAB LigA subunit K04100 ligA; protocatechuate 4,5-dioxygenase, alpha chain [EC:1.13.11.8]
D Rpal_1199 Protocatechuate 4,5-dioxygenase K04101 ligB; protocatechuate 4,5-dioxygenase, beta chain [EC:1.13.11.8]
D Rpal_5183 Protocatechuate 4,5-dioxygenase K04101 ligB; protocatechuate 4,5-dioxygenase, beta chain [EC:1.13.11.8]
D Rpal_5184 oxidoreductase domain protein K10219 ligC; 2-hydroxy-4-carboxymuconate semialdehyde hemiacetal dehydrogenase [EC:1.1.1.312]
D Rpal_5181 amidohydrolase 2 K10221 ligI; 2-pyrone-4,6-dicarboxylate lactonase [EC:3.1.1.57]
D Rpal_5177 protein of unknown function DUF453 K16514 galD; 4-oxalomesaconate tautomerase [EC:5.3.2.8]
D Rpal_5178 amidohydrolase 2 K10220 ligJ; 4-oxalmesaconate hydratase [EC:4.2.1.83]
D Rpal_5179 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17]
D Rpal_2077 cytochrome P450 K22553 CYP199A2; 4-methoxybenzoate monooxygenase (O-demethylating) [EC:1.14.99.15]
D Rpal_1983 4-hydroxybenzoate 3-monooxygenase K00481 pobA; p-hydroxybenzoate 3-monooxygenase [EC:1.14.13.2]
D Rpal_0736 benzoate-CoA ligase family K04105 hbaA; 4-hydroxybenzoate-CoA ligase [EC:6.2.1.27 6.2.1.25]
D Rpal_1990 thioesterase superfamily protein K01075 E3.1.2.23; 4-hydroxybenzoyl-CoA thioesterase [EC:3.1.2.23]
D Rpal_0737 4-hydroxybenzoyl-CoA reductase, gamma subunit K04107 hcrC; 4-hydroxybenzoyl-CoA reductase subunit gamma [EC:1.1.7.1]
D Rpal_0738 4-hydroxybenzoyl-CoA reductase, alpha subunit K04108 hcrA; 4-hydroxybenzoyl-CoA reductase subunit alpha [EC:1.1.7.1]
D Rpal_0739 4-hydroxybenzoyl-CoA reductase, beta subunit K04109 hcrB; 4-hydroxybenzoyl-CoA reductase subunit beta [EC:1.1.7.1]
D Rpal_0728 benzoate-CoA ligase family K04110 badA; benzoate-CoA ligase [EC:6.2.1.25]
D Rpal_0724 benzoyl-CoA reductase, subunit C K04112 bcrC; benzoyl-CoA reductase subunit C [EC:1.3.7.8]
D Rpal_0725 benzoyl-CoA reductase, subunit B K04113 bcrB; benzoyl-CoA reductase subunit B [EC:1.3.7.8]
D Rpal_0726 benzoyl-CoA reductase, subunit A K04114 bcrA; benzoyl-CoA reductase subunit A [EC:1.3.7.8]
D Rpal_0727 benzoyl-CoA reductase, subunit D K04115 bcrD; benzoyl-CoA reductase subunit D [EC:1.3.7.8]
D Rpal_0718 cyclohexanecarboxylate-CoA ligase K04116 aliA; cyclohexanecarboxylate-CoA ligase [EC:6.2.1.-]
D Rpal_0719 cyclohexanecarboxyl-CoA dehydrogenase K04117 aliB; cyclohexanecarboxyl-CoA dehydrogenase [EC:1.3.99.-]
D Rpal_0717 Enoyl-CoA hydratase/isomerase K07534 badK; cyclohex-1-ene-1-carboxyl-CoA hydratase [EC:4.2.1.-]
D Rpal_0721 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase K07535 badH; 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase [EC:1.1.1.-]
D Rpal_0720 2-ketocyclohexanecarboxyl-CoA hydrolase K07536 badI; 2-ketocyclohexanecarboxyl-CoA hydrolase [EC:3.1.2.-]
D Rpal_0887 3-hydroxyacyl-CoA dehydrogenase NAD-binding K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D Rpal_4238 3-hydroxyacyl-CoA dehydrogenase NAD-binding K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D Rpal_1284 acyl-CoA dehydrogenase domain protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D Rpal_2014 Enoyl-CoA hydratase/isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D Rpal_5230 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D Rpal_3607 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rpal_0886 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rpal_1903 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rpal_4830 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rpal_0532 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rpal_2547 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rpal_3956 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rpal_1956 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rpal_4236 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rpal_0744 benzoyl-CoA oxygenase, B subunit K15512 boxB; benzoyl-CoA 2,3-epoxidase subunit B [EC:1.14.13.208]
D Rpal_0743 benzoyl-CoA-dihydrodiol lyase K15513 boxC; benzoyl-CoA-dihydrodiol lyase [EC:4.1.2.44]
C 00627 Aminobenzoate degradation [PATH:rpt00627]
D Rpal_3145 nitrile hydratase, alpha subunit K01721 nthA; nitrile hydratase subunit alpha [EC:4.2.1.84]
D Rpal_3146 Nitrile hydratase K20807 nthB; nitrile hydratase subunit beta [EC:4.2.1.84]
D Rpal_1900 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D Rpal_4149 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D Rpal_4481 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D Rpal_3322 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D Rpal_1934 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D Rpal_2668 Acetamidase/Formamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D Rpal_3929 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D Rpal_4645 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D Rpal_1751 Nitrilase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D Rpal_3583 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D Rpal_0728 benzoate-CoA ligase family K04110 badA; benzoate-CoA ligase [EC:6.2.1.25]
D Rpal_1799 thiamine pyrophosphate domain protein TPP-binding K01576 mdlC; benzoylformate decarboxylase [EC:4.1.1.7]
D Rpal_0736 benzoate-CoA ligase family K04105 hbaA; 4-hydroxybenzoate-CoA ligase [EC:6.2.1.27 6.2.1.25]
D Rpal_0737 4-hydroxybenzoyl-CoA reductase, gamma subunit K04107 hcrC; 4-hydroxybenzoyl-CoA reductase subunit gamma [EC:1.1.7.1]
D Rpal_0738 4-hydroxybenzoyl-CoA reductase, alpha subunit K04108 hcrA; 4-hydroxybenzoyl-CoA reductase subunit alpha [EC:1.1.7.1]
D Rpal_0739 4-hydroxybenzoyl-CoA reductase, beta subunit K04109 hcrB; 4-hydroxybenzoyl-CoA reductase subunit beta [EC:1.1.7.1]
D Rpal_1000 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D Rpal_4139 Vanillate monooxygenase K03862 vanA; vanillate monooxygenase [EC:1.14.13.82]
D Rpal_4141 oxidoreductase FAD/NAD(P)-binding domain protein K03863 vanB; vanillate monooxygenase ferredoxin subunit
D Rpal_5182 protocatechuate 4,5-dioxygenase, alpha subunit K04100 ligA; protocatechuate 4,5-dioxygenase, alpha chain [EC:1.13.11.8]
D Rpal_1198 Extradiol ring-cleavage dioxygenase LigAB LigA subunit K04100 ligA; protocatechuate 4,5-dioxygenase, alpha chain [EC:1.13.11.8]
D Rpal_1199 Protocatechuate 4,5-dioxygenase K04101 ligB; protocatechuate 4,5-dioxygenase, beta chain [EC:1.13.11.8]
D Rpal_5183 Protocatechuate 4,5-dioxygenase K04101 ligB; protocatechuate 4,5-dioxygenase, beta chain [EC:1.13.11.8]
D Rpal_5184 oxidoreductase domain protein K10219 ligC; 2-hydroxy-4-carboxymuconate semialdehyde hemiacetal dehydrogenase [EC:1.1.1.312]
D Rpal_5181 amidohydrolase 2 K10221 ligI; 2-pyrone-4,6-dicarboxylate lactonase [EC:3.1.1.57]
D Rpal_2014 Enoyl-CoA hydratase/isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
C 00364 Fluorobenzoate degradation [PATH:rpt00364]
D Rpal_1386 Carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D Rpal_5319 Carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D Rpal_3145 nitrile hydratase, alpha subunit K01721 nthA; nitrile hydratase subunit alpha [EC:4.2.1.84]
D Rpal_3146 Nitrile hydratase K20807 nthB; nitrile hydratase subunit beta [EC:4.2.1.84]
D Rpal_5309 iron-containing alcohol dehydrogenase K00217 E1.3.1.32; maleylacetate reductase [EC:1.3.1.32]
C 00625 Chloroalkane and chloroalkene degradation [PATH:rpt00625]
D Rpal_4176 Alcohol dehydrogenase GroES domain protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D Rpal_0378 zinc-binding alcohol dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D Rpal_1398 iron-containing alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
D Rpal_3477 Alcohol dehydrogenase GroES domain protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D Rpal_4444 Alcohol dehydrogenase zinc-binding domain protein K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D Rpal_2166 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D Rpal_2445 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Rpal_1621 Fe-only nitrogenase, delta subunit K00531 anfG; nitrogenase delta subunit [EC:1.18.6.1]
D Rpal_2591 Nitrogenase K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]
D Rpal_5099 nitrogenase molybdenum-iron protein beta chain K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]
D Rpal_2888 oxidoreductase/nitrogenase component 1 K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]
D Rpal_2909 Nitrogenase K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]
D Rpal_1620 Fe-only nitrogenase, beta subunit K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]
D Rpal_2597 nitrogenase iron protein K02588 nifH; nitrogenase iron protein NifH
D Rpal_2886 Nitrogenase K02588 nifH; nitrogenase iron protein NifH
D Rpal_2907 nitrogenase iron protein K02588 nifH; nitrogenase iron protein NifH
D Rpal_5101 nitrogenase iron protein K02588 nifH; nitrogenase iron protein NifH
D Rpal_1623 nitrogenase iron protein K02588 nifH; nitrogenase iron protein NifH
D Rpal_5100 nitrogenase molybdenum-iron protein alpha chain K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]
D Rpal_1622 nitrogenase alpha chain K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]
D Rpal_2592 Nitrogenase K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]
D Rpal_2607 Nitrogenase K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]
D Rpal_2908 Nitrogenase K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]
D Rpal_1354 alpha/beta hydrolase fold K01561 dehH; haloacetate dehalogenase [EC:3.8.1.3]
D Rpal_4679 haloacid dehalogenase, type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
D Rpal_2786 haloacid dehalogenase, type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:rpt00361]
D Rpal_1386 Carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D Rpal_5319 Carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D Rpal_5309 iron-containing alcohol dehydrogenase K00217 E1.3.1.32; maleylacetate reductase [EC:1.3.1.32]
D Rpal_2441 intradiol ring-cleavage dioxygenase K04098 chqB; hydroxyquinol 1,2-dioxygenase [EC:1.13.11.37]
D Rpal_4679 haloacid dehalogenase, type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
D Rpal_2786 haloacid dehalogenase, type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
D Rpal_1354 alpha/beta hydrolase fold K01561 dehH; haloacetate dehalogenase [EC:3.8.1.3]
C 00623 Toluene degradation [PATH:rpt00623]
D Rpal_1386 Carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D Rpal_5319 Carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D Rpal_5309 iron-containing alcohol dehydrogenase K00217 E1.3.1.32; maleylacetate reductase [EC:1.3.1.32]
C 00622 Xylene degradation
D Rpal_1368 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D Rpal_4629 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D Rpal_3581 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00633 Nitrotoluene degradation [PATH:rpt00633]
D Rpal_4888 NADH:flavin oxidoreductase/NADH oxidase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-]
D Rpal_1155 nickel-dependent hydrogenase large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6]
D Rpal_1154 hydrogenase (NiFe) small subunit HydA K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
D Rpal_1153 nickel-dependent hydrogenase large subunit K23549 hupV; uptake hydrogenase large subunit [EC:1.12.99.6]
D Rpal_1152 NADH ubiquinone oxidoreductase 20 kDa subunit K23548 hupU; uptake hydrogenase small subunit [EC:1.12.99.6]
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation [PATH:rpt00643]
D Rpal_5153 homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D Rpal_5152 maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2]
D Rpal_5151 fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
D Rpal_3145 nitrile hydratase, alpha subunit K01721 nthA; nitrile hydratase subunit alpha [EC:4.2.1.84]
D Rpal_3146 Nitrile hydratase K20807 nthB; nitrile hydratase subunit beta [EC:4.2.1.84]
D Rpal_1900 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D Rpal_4149 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D Rpal_4481 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D Rpal_3322 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D Rpal_1934 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D Rpal_2668 Acetamidase/Formamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D Rpal_3929 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D Rpal_4645 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D Rpal_1751 Nitrilase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D Rpal_2561 coenzyme A transferase K01039 gctA; glutaconate CoA-transferase, subunit A [EC:2.8.3.12]
D Rpal_5132 coenzyme A transferase K01039 gctA; glutaconate CoA-transferase, subunit A [EC:2.8.3.12]
D Rpal_1221 coenzyme A transferase K01039 gctA; glutaconate CoA-transferase, subunit A [EC:2.8.3.12]
D Rpal_5133 coenzyme A transferase K01040 gctB; glutaconate CoA-transferase, subunit B [EC:2.8.3.12]
D Rpal_2560 coenzyme A transferase K01040 gctB; glutaconate CoA-transferase, subunit B [EC:2.8.3.12]
D Rpal_1222 coenzyme A transferase K01040 gctB; glutaconate CoA-transferase, subunit B [EC:2.8.3.12]
C 00791 Atrazine degradation [PATH:rpt00791]
D Rpal_1654 amidohydrolase, AtzE family K19837 atzE; 1-carboxybiuret hydrolase [EC:3.5.1.131]
D Rpal_1587 allophanate hydrolase K01457 atzF; allophanate hydrolase [EC:3.5.1.54]
D Rpal_1651 allophanate hydrolase K01457 atzF; allophanate hydrolase [EC:3.5.1.54]
D Rpal_2912 isochorismatase hydrolase K23359 biuH; biuret amidohydrolase [EC:3.5.1.84]
D Rpal_1588 urea carboxylase K01941 uca; urea carboxylase [EC:6.3.4.6]
D Rpal_4182 urease, alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D Rpal_4184 urease, beta subunit K01429 ureB; urease subunit beta [EC:3.5.1.5]
D Rpal_4185 urease, gamma subunit K01430 ureA; urease subunit gamma [EC:3.5.1.5]
C 00930 Caprolactam degradation [PATH:rpt00930]
D Rpal_2700 ThiJ/PfpI domain protein K18199 inhA; cyclohexyl-isocyanide hydratase [EC:4.2.1.103]
D Rpal_4144 SMP-30/Gluconolaconase/LRE domain protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
D Rpal_2014 Enoyl-CoA hydratase/isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D Rpal_0887 3-hydroxyacyl-CoA dehydrogenase NAD-binding K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
D Rpal_1368 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D Rpal_4629 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D Rpal_3581 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00626 Naphthalene degradation [PATH:rpt00626]
D Rpal_4176 Alcohol dehydrogenase GroES domain protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D Rpal_0378 zinc-binding alcohol dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D Rpal_1398 iron-containing alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
D Rpal_3477 Alcohol dehydrogenase GroES domain protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D Rpal_4444 Alcohol dehydrogenase zinc-binding domain protein K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D Rpal_2166 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
D Rpal_5182 protocatechuate 4,5-dioxygenase, alpha subunit K04100 ligA; protocatechuate 4,5-dioxygenase, alpha chain [EC:1.13.11.8]
D Rpal_1198 Extradiol ring-cleavage dioxygenase LigAB LigA subunit K04100 ligA; protocatechuate 4,5-dioxygenase, alpha chain [EC:1.13.11.8]
D Rpal_1199 Protocatechuate 4,5-dioxygenase K04101 ligB; protocatechuate 4,5-dioxygenase, beta chain [EC:1.13.11.8]
D Rpal_5183 Protocatechuate 4,5-dioxygenase K04101 ligB; protocatechuate 4,5-dioxygenase, beta chain [EC:1.13.11.8]
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:rpt03020]
D Rpal_3687 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D Rpal_3686 DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D Rpal_3642 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D Rpal_2967 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:rpt03010]
D Rpal_0067 ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D Rpal_3268 ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D Rpal_3661 ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D Rpal_1777 RNA-binding S4 domain protein K02986 RP-S4; small subunit ribosomal protein S4
D Rpal_3650 ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D Rpal_3487 ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D Rpal_3671 ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D Rpal_3653 ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D Rpal_3107 ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D Rpal_3668 ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D Rpal_3643 ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D Rpal_3672 ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D Rpal_3644 ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D Rpal_3654 ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D Rpal_0437 ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D Rpal_0245 ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D Rpal_3658 ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D Rpal_3488 ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D Rpal_3663 ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D Rpal_5323 ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D Rpal_4656 ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D Rpal_4529 ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D Rpal_3691 ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D Rpal_3664 ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D Rpal_3667 ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D Rpal_3666 ribosomal protein L4/L1e K02926 RP-L4; large subunit ribosomal protein L4
D Rpal_3655 ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D Rpal_3652 ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D Rpal_3688 ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D Rpal_3490 ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D Rpal_3689 ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D Rpal_3692 ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D Rpal_3106 ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D Rpal_3657 ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D Rpal_3648 ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D Rpal_3660 ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D Rpal_3641 ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D Rpal_3651 ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D Rpal_0242 ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D Rpal_0039 ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D Rpal_0151 ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D Rpal_3662 ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D Rpal_3665 Ribosomal protein L25/L23 K02892 RP-L23; large subunit ribosomal protein L23
D Rpal_3656 ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D Rpal_4840 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 K02897 RP-L25; large subunit ribosomal protein L25
D Rpal_0152 ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D Rpal_0494 ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D Rpal_3659 ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D Rpal_3649 ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D Rpal_0988 ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D Rpal_0527 ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D Rpal_3540 ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D Rpal_0638 ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D Rpal_0040 ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D Rpal_4677 ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D Rpal_R0049 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Rpal_R0056 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Rpal_R0053 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Rpal_R0046 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Rpal_R0045 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Rpal_R0061 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:rpt00970]
D Rpal_R0047 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Rpal_R0054 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Rpal_R0002 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Rpal_R0007 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Rpal_R0026 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Rpal_R0012 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Rpal_R0008 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Rpal_R0036 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Rpal_R0010 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Rpal_R0028 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D Rpal_R0031 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D Rpal_R0027 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D Rpal_R0014 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D Rpal_R0042 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D Rpal_R0006 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Rpal_R0024 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Rpal_R0005 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Rpal_R0038 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Rpal_R0058 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Rpal_R0044 tRNA-His K14226 tRNA-His; tRNA His
D Rpal_R0048 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D Rpal_R0055 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D Rpal_R0009 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Rpal_R0041 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Rpal_R0035 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Rpal_R0001 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Rpal_R0033 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Rpal_R0029 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Rpal_R0020 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Rpal_R0016 tRNA-Met K14230 tRNA-Met; tRNA Met
D Rpal_R0019 tRNA-Met K14230 tRNA-Met; tRNA Met
D Rpal_R0034 tRNA-Met K14230 tRNA-Met; tRNA Met
D Rpal_R0018 tRNA-Met K14230 tRNA-Met; tRNA Met
D Rpal_R0051 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D Rpal_R0015 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Rpal_R0030 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Rpal_R0025 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Rpal_R0003 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Rpal_R0022 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Rpal_R0023 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Rpal_R0057 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Rpal_R0004 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Rpal_R0052 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Rpal_R0040 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Rpal_R0037 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D Rpal_R0039 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D Rpal_R0017 tRNA-Val K14237 tRNA-Val; tRNA Val
D Rpal_R0032 tRNA-Val K14237 tRNA-Val; tRNA Val
D Rpal_R0013 tRNA-Val K14237 tRNA-Val; tRNA Val
D Rpal_3252 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Rpal_0827 Amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D Rpal_1980 Amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D Rpal_3517 glutamyl-tRNA(Gln) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D Rpal_3514 glutamyl-tRNA(Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D Rpal_3521 glutamyl-tRNA(Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D Rpal_3251 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D Rpal_4372 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Rpal_3453 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Rpal_1237 glycyl-tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D Rpal_1239 glycyl-tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D Rpal_3886 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D Rpal_3185 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D Rpal_2208 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D Rpal_3116 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D Rpal_0626 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D Rpal_2853 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D Rpal_0290 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Rpal_4861 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D Rpal_5166 lysyl-tRNA synthetase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D Rpal_3194 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Rpal_3276 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D Rpal_1369 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D Rpal_0038 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D Rpal_0036 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D Rpal_2738 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Rpal_0459 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:rpt03060]
D Rpal_3647 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D Rpal_3694 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D Rpal_3232 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D Rpal_3172 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D Rpal_3171 protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D Rpal_3173 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D Rpal_0636 60 kDa inner membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Rpal_0511 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Rpal_0304 protein-export protein SecB K03071 secB; preprotein translocase subunit SecB
D Rpal_0246 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D Rpal_R0060 ffs; SRP RNA; RNA component of signal recognition particle K01983 ffs; SRP RNA
D Rpal_0207 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D Rpal_3189 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA
D Rpal_3188 putative sec-independent protein translocase protein K03117 tatB; sec-independent protein translocase protein TatB
D Rpal_3187 Sec-independent protein translocase, TatC subunit K03118 tatC; sec-independent protein translocase protein TatC
D Rpal_0892 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D Rpal_2971 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D Rpal_4860 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:rpt04122]
D Rpal_5089 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Rpal_2741 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Rpal_4133 Rhodanese domain protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D Rpal_4174 SirA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D Rpal_1496 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D Rpal_1359 molybdopterin biosynthesis MoaE protein K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D Rpal_2191 molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D Rpal_1360 molybdopterin converting factor, subunit 1 K03636 moaD; sulfur-carrier protein
D Rpal_0089 UBA/THIF-type NAD/FAD binding protein K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D Rpal_3237 molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D Rpal_1220 molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D Rpal_4093 thiamine biosynthesis protein ThiS K03154 thiS; sulfur carrier protein
C 03050 Proteasome
C 03018 RNA degradation [PATH:rpt03018]
D Rpal_0166 NUDIX hydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D Rpal_0169 NUDIX hydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D Rpal_2728 ribonuclease, Rne/Rng family K08300 rne; ribonuclease E [EC:3.1.26.12]
D Rpal_3216 Phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Rpal_0436 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D Rpal_4192 DEAD/DEAH box helicase domain protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D Rpal_3536 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D Rpal_4525 DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D Rpal_5313 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D Rpal_0298 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D Rpal_3283 beta-lactamase domain protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D Rpal_0336 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D Rpal_1331 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Rpal_2457 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Rpal_2867 RNA chaperone Hfq K03666 hfq; host factor-I protein
D Rpal_3458 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D Rpal_1380 Polynucleotide adenylyltransferase region K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:rpt03030]
D Rpal_1138 Exonuclease RNase T and DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Rpal_0303 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Rpal_3270 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Rpal_0619 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Rpal_3115 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Rpal_0292 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Rpal_3469 DNA polymerase III chi subunit HolC K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D Rpal_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Rpal_3494 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D Rpal_1480 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D Rpal_3154 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Rpal_4749 Ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D Rpal_1226 Ribonuclease H K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D Rpal_5204 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Rpal_4035 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:rpt03410]
D Rpal_0346 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D Rpal_4978 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D Rpal_2856 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D Rpal_0087 formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D Rpal_5238 HhH-GPD family protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D Rpal_1255 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D Rpal_4358 uracil-DNA glycosylase superfamily K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
D Rpal_2002 phage SPO1 DNA polymerase-related protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D Rpal_2965 Uracil-DNA glycosylase superfamily K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D Rpal_1228 phage SPO1 DNA polymerase-related protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D Rpal_3202 exodeoxyribonuclease III Xth K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D Rpal_0284 exodeoxyribonuclease III Xth K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D Rpal_3728 exodeoxyribonuclease III Xth K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D Rpal_5204 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Rpal_2787 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Rpal_4035 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:rpt03420]
D Rpal_2938 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D Rpal_3156 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D Rpal_4824 excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B
D Rpal_1362 excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C
D Rpal_3142 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Rpal_4021 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Rpal_5204 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Rpal_4035 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:rpt03430]
D Rpal_0513 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D Rpal_4855 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D Rpal_3142 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Rpal_4021 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Rpal_1352 exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D Rpal_1023 exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D Rpal_2787 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Rpal_3154 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Rpal_3270 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Rpal_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Rpal_0619 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Rpal_0292 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Rpal_3115 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Rpal_1138 Exonuclease RNase T and DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Rpal_0303 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Rpal_3469 DNA polymerase III chi subunit HolC K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D Rpal_4035 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:rpt03440]
D Rpal_2787 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Rpal_3154 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Rpal_0003 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D Rpal_2975 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D Rpal_0621 recombination protein RecR K06187 recR; recombination protein RecR
D Rpal_4376 recA protein K03553 recA; recombination protein RecA
D Rpal_5204 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Rpal_1290 Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D Rpal_1292 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D Rpal_1289 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D Rpal_2936 DEAD/DEAH box helicase domain protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D Rpal_3270 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Rpal_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Rpal_0619 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Rpal_0292 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Rpal_3115 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Rpal_1138 Exonuclease RNase T and DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Rpal_0303 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Rpal_3469 DNA polymerase III chi subunit HolC K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D Rpal_0176 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining [PATH:rpt03450]
D Rpal_0391 Ku protein K10979 ku; DNA end-binding protein Ku
D Rpal_4172 Ku protein K10979 ku; DNA end-binding protein Ku
D Rpal_4171 DNA ligase D K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D Rpal_2316 DNA polymerase LigD, ligase domain protein K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:rpt02010]
D Rpal_0821 sulfate ABC transporter, periplasmic sulfate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D Rpal_0820 sulfate ABC transporter, inner membrane subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D Rpal_0819 sulfate ABC transporter, inner membrane subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D Rpal_0818 sulfate ABC transporter, ATPase subunit K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D Rpal_2403 ABC transporter nitrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D Rpal_2404 nitrate ABC transporter, inner membrane subunit K15577 nrtB; nitrate/nitrite transport system permease protein
D Rpal_2405 nitrate ABC transporter, ATPase subunits C and D K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D Rpal_2879 aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D Rpal_2889 extracellular solute-binding protein family 3 K15553 ssuA; sulfonate transport system substrate-binding protein
D Rpal_2884 aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D Rpal_2895 aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D Rpal_1571 putative sulfate ester transporter, periplasmic binding component K15553 ssuA; sulfonate transport system substrate-binding protein
D Rpal_2902 ABC nitrate/sulfonate/bicarbonate family transporter, periplasmic ligand binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D Rpal_0952 putative substrate-binding component of ABC transporter K15553 ssuA; sulfonate transport system substrate-binding protein
D Rpal_2686 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D Rpal_2255 NMT1/THI5 like domain protein K15553 ssuA; sulfonate transport system substrate-binding protein
D Rpal_2882 binding-protein-dependent transport systems inner membrane component K15554 ssuC; sulfonate transport system permease protein
D Rpal_2894 binding-protein-dependent transport systems inner membrane component K15554 ssuC; sulfonate transport system permease protein
D Rpal_1572 binding-protein-dependent transport systems inner membrane component K15554 ssuC; sulfonate transport system permease protein
D Rpal_2903 binding-protein-dependent transport systems inner membrane component K15554 ssuC; sulfonate transport system permease protein
D Rpal_0950 binding-protein-dependent transport systems inner membrane component K15554 ssuC; sulfonate transport system permease protein
D Rpal_1584 binding-protein-dependent transport systems inner membrane component K15554 ssuC; sulfonate transport system permease protein
D Rpal_2254 binding-protein-dependent transport systems inner membrane component K15554 ssuC; sulfonate transport system permease protein
D Rpal_2687 binding-protein-dependent transport systems inner membrane component K15554 ssuC; sulfonate transport system permease protein
D Rpal_2881 ABC transporter related K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D Rpal_2893 ABC transporter related K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D Rpal_1573 ABC transporter related K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D Rpal_1583 ABC transporter related K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D Rpal_2904 ABC transporter related K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D Rpal_0951 ABC transporter related K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D Rpal_2688 ABC transporter related K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D Rpal_2253 ABC transporter related K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D Rpal_2672 molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D Rpal_5198 molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D Rpal_2673 molybdate ABC transporter, inner membrane subunit K02018 modB; molybdate transport system permease protein
D Rpal_5197 molybdate ABC transporter, inner membrane subunit K02018 modB; molybdate transport system permease protein
D Rpal_5196 molybdate ABC transporter, ATPase subunit K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D Rpal_2671 ABC transporter related K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D Rpal_4631 extracellular solute-binding protein family 1 K02012 afuA; iron(III) transport system substrate-binding protein
D Rpal_4632 binding-protein-dependent transport systems inner membrane component K02011 afuB; iron(III) transport system permease protein
D Rpal_2225 extracellular solute-binding protein family 1 K11073 potF; putrescine transport system substrate-binding protein
D Rpal_4637 Ornithine carbamoyltransferase K11074 potI; putrescine transport system permease protein
D Rpal_4638 binding-protein-dependent transport systems inner membrane component K11075 potH; putrescine transport system permease protein
D Rpal_4639 spermidine/putrescine ABC transporter ATPase subunit K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16]
D Rpal_2251 Substrate-binding region of ABC-type glycine betaine transport system K05845 opuC; osmoprotectant transport system substrate-binding protein
D Rpal_2252 ABC transporter related K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D Rpal_0132 ABC transporter related K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D Rpal_3961 ABC transporter related K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D Rpal_4483 Mammalian cell entry related domain protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D Rpal_4715 Mammalian cell entry related domain protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D Rpal_4485 protein of unknown function DUF140 K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D Rpal_4717 protein of unknown function DUF140 K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D Rpal_4484 ABC transporter related K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D Rpal_4716 ABC transporter related K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D Rpal_5058 basic membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins
D Rpal_5056 inner-membrane translocator K23535 nupB; general nucleoside transport system permease protein
D Rpal_5057 inner-membrane translocator K23536 nupC; general nucleoside transport system permease protein
D Rpal_5055 ABC transporter related K23537 nupA; general nucleoside transport system ATP-binding protein
D Rpal_4889 putative periplasmic binding ABC transporter protein, putative sugar binding precursor K17321 glpV; glycerol transport system substrate-binding protein
D Rpal_4892 binding-protein-dependent transport systems inner membrane component K17322 glpP; glycerol transport system permease protein
D Rpal_4891 binding-protein-dependent transport systems inner membrane component K17323 glpQ; glycerol transport system permease protein
D Rpal_4894 ABC transporter related K17324 glpS; glycerol transport system ATP-binding protein
D Rpal_4893 ABC transporter related K17325 glpT; glycerol transport system ATP-binding protein
D Rpal_0060 extracellular solute-binding protein family 1 K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D Rpal_5274 extracellular solute-binding protein family 1 K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D Rpal_0059 binding-protein-dependent transport systems inner membrane component K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D Rpal_0058 binding-protein-dependent transport systems inner membrane component K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D Rpal_0057 ABC transporter related K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D Rpal_5266 phosphate ABC transporter, periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D Rpal_4257 phosphate ABC transporter, periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D Rpal_5265 phosphate ABC transporter, inner membrane subunit PstC K02037 pstC; phosphate transport system permease protein
D Rpal_5264 phosphate ABC transporter, inner membrane subunit PstA K02038 pstA; phosphate transport system permease protein
D Rpal_5263 phosphate ABC transporter, ATPase subunit K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D Rpal_0767 phosphonate ABC transporter, periplasmic phosphonate binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D Rpal_0766 phosphonate ABC transporter, inner membrane subunit K02042 phnE; phosphonate transport system permease protein
D Rpal_0765 phosphonate ABC transporter, inner membrane subunit K02042 phnE; phosphonate transport system permease protein
D Rpal_0768 phosphonate ABC transporter, ATPase subunit K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D Rpal_2832 extracellular solute-binding protein family 3 K09969 aapJ; general L-amino acid transport system substrate-binding protein
D Rpal_2899 extracellular solute-binding protein family 3 K09969 aapJ; general L-amino acid transport system substrate-binding protein
D Rpal_5283 extracellular solute-binding protein family 3 K09969 aapJ; general L-amino acid transport system substrate-binding protein
D Rpal_2833 polar amino acid ABC transporter, inner membrane subunit K09970 aapQ; general L-amino acid transport system permease protein
D Rpal_2900 binding-protein-dependent transport systems inner membrane component K09970 aapQ; general L-amino acid transport system permease protein
D Rpal_2834 polar amino acid ABC transporter, inner membrane subunit K09971 aapM; general L-amino acid transport system permease protein
D Rpal_2901 polar amino acid ABC transporter, inner membrane subunit K09971 aapM; general L-amino acid transport system permease protein
D Rpal_2835 ABC transporter related K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1]
D Rpal_0110 putative ABC transporter; putative branched-chain amino acid transporter K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rpal_4244 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rpal_4245 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rpal_0486 substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rpal_2487 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rpal_1177 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rpal_0735 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rpal_4549 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rpal_4559 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rpal_4564 extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rpal_4575 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rpal_2079 branched chain amino acid transport system substrate binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rpal_3503 putative ABC transporter, substrate binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rpal_1941 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rpal_1948 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rpal_4882 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rpal_1850 putative ABC transporter, substrate binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rpal_4334 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rpal_5300 putative periplasmic substrate binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rpal_1991 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rpal_2248 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rpal_2001 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rpal_4000 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rpal_1428 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rpal_1559 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rpal_4246 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rpal_5294 putative ABC-type branched-chain amino acid transporter, periplasmic binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rpal_0583 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rpal_1598 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rpal_1842 conserved hypothetical protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rpal_3830 branched-chain amino acid ABC transporter, periplasmic binding protein, putative K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rpal_1752 putative UreA/short-chain amide transport system substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rpal_4650 putative ABC transporter (substrate-binding protein); putative branched-chain amino acid transporter K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rpal_3718 branched-chain amino acid ABC transporter, periplasmic binding protein, putative K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rpal_4242 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Rpal_1423 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Rpal_2519 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Rpal_1178 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Rpal_0734 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Rpal_1753 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Rpal_4550 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Rpal_4558 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Rpal_4565 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Rpal_4573 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Rpal_1940 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Rpal_1949 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Rpal_4885 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Rpal_4330 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Rpal_1995 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Rpal_3829 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Rpal_3717 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Rpal_1555 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Rpal_1601 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Rpal_0733 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Rpal_1754 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Rpal_1994 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Rpal_1556 inner-membrane translocator K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Rpal_1602 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D Rpal_1424 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D Rpal_1179 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D Rpal_1939 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D Rpal_1950 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D Rpal_2520 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D Rpal_4331 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D Rpal_4243 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D Rpal_4551 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D Rpal_4557 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D Rpal_4566 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D Rpal_4574 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D Rpal_4886 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D Rpal_4240 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Rpal_1425 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Rpal_2517 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Rpal_1180 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Rpal_1599 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Rpal_4552 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Rpal_4556 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Rpal_4567 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Rpal_4571 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Rpal_1951 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Rpal_4883 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Rpal_4332 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Rpal_3715 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Rpal_1557 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Rpal_3827 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Rpal_1558 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Rpal_1426 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Rpal_1755 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Rpal_1600 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Rpal_1181 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Rpal_0732 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Rpal_1952 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Rpal_1993 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Rpal_2518 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Rpal_3826 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Rpal_3714 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Rpal_4333 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Rpal_4241 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Rpal_4576 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Rpal_4553 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Rpal_4555 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Rpal_4568 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Rpal_4884 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Rpal_2682 NLPA lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein
D Rpal_2603 lipoprotein, YaeC family K02073 metQ; D-methionine transport system substrate-binding protein
D Rpal_1612 lipoprotein, YaeC family K02073 metQ; D-methionine transport system substrate-binding protein
D Rpal_1614 NLPA lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein
D Rpal_2680 binding-protein-dependent transport systems inner membrane component K02072 metI; D-methionine transport system permease protein
D Rpal_2605 binding-protein-dependent transport systems inner membrane component K02072 metI; D-methionine transport system permease protein
D Rpal_1611 binding-protein-dependent transport systems inner membrane component K02072 metI; D-methionine transport system permease protein
D Rpal_2681 ABC transporter related K02071 metN; D-methionine transport system ATP-binding protein
D Rpal_2604 ABC transporter related K02071 metN; D-methionine transport system ATP-binding protein
D Rpal_1610 ABC transporter related K02071 metN; D-methionine transport system ATP-binding protein
D Rpal_4191 urea ABC transporter, urea binding protein K11959 urtA; urea transport system substrate-binding protein
D Rpal_1443 urea ABC transporter, urea binding protein K11959 urtA; urea transport system substrate-binding protein
D Rpal_2663 putative UreA/short-chain amide transport system substrate-binding protein precursor K11959 urtA; urea transport system substrate-binding protein
D Rpal_4190 urea ABC transporter, permease protein UrtB K11960 urtB; urea transport system permease protein
D Rpal_1444 urea ABC transporter, permease protein UrtB K11960 urtB; urea transport system permease protein
D Rpal_2664 inner-membrane translocator K11960 urtB; urea transport system permease protein
D Rpal_4189 urea ABC transporter, permease protein UrtC K11961 urtC; urea transport system permease protein
D Rpal_1445 urea ABC transporter, permease protein UrtC K11961 urtC; urea transport system permease protein
D Rpal_2665 inner-membrane translocator K11961 urtC; urea transport system permease protein
D Rpal_1446 urea ABC transporter, ATP-binding protein UrtD K11962 urtD; urea transport system ATP-binding protein
D Rpal_4188 urea ABC transporter, ATP-binding protein UrtD K11962 urtD; urea transport system ATP-binding protein
D Rpal_2666 ABC transporter related K11962 urtD; urea transport system ATP-binding protein
D Rpal_4187 urea ABC transporter, ATP-binding protein UrtE K11963 urtE; urea transport system ATP-binding protein
D Rpal_1447 urea ABC transporter, ATP-binding protein UrtE K11963 urtE; urea transport system ATP-binding protein
D Rpal_2667 ABC transporter related K11963 urtE; urea transport system ATP-binding protein
D Rpal_4213 extracellular solute-binding protein family 5 K13893 yejA; microcin C transport system substrate-binding protein
D Rpal_4214 extracellular solute-binding protein family 5 K13893 yejA; microcin C transport system substrate-binding protein
D Rpal_4212 binding-protein-dependent transport systems inner membrane component K13894 yejB; microcin C transport system permease protein
D Rpal_4211 binding-protein-dependent transport systems inner membrane component K13895 yejE; microcin C transport system permease protein
D Rpal_4210 ABC transporter related K13896 yejF; microcin C transport system ATP-binding protein
D Rpal_2725 BioY protein K03523 bioY; biotin transport system substrate-specific component
D Rpal_4589 ABC-2 type transporter K09690 wzm; homopolymeric O-antigen transport system permease protein
D Rpal_4590 ABC transporter related K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D Rpal_3275 lipoprotein releasing system, transmembrane protein, LolC/E family K09808 lolC_E; lipoprotein-releasing system permease protein
D Rpal_1840 protein of unknown function DUF214 K09808 lolC_E; lipoprotein-releasing system permease protein
D Rpal_1841 ABC transporter related K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D Rpal_3274 ABC transporter related K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D Rpal_0203 heme exporter protein CcmD K02196 ccmD; heme exporter protein D
D Rpal_0202 heme exporter protein CcmC K02195 ccmC; heme exporter protein C
D Rpal_0201 heme exporter protein CcmB K02194 ccmB; heme exporter protein B
D Rpal_0200 heme exporter protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D Rpal_3471 permease YjgP/YjgQ family protein K07091 lptF; lipopolysaccharide export system permease protein
D Rpal_3472 permease YjgP/YjgQ family protein K11720 lptG; lipopolysaccharide export system permease protein
D Rpal_0050 ABC transporter related K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D Rpal_2354 nitrous oxide metabolic protein K19341 nosY; Cu-processing system permease protein
D Rpal_2353 ABC transporter related K19340 nosF; Cu-processing system ATP-binding protein
D Rpal_5217 protein of unknown function DUF214 K09811 ftsX; cell division transport system permease protein
D Rpal_5218 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D Rpal_4514 ABC transporter related K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D Rpal_2216 ABC transporter related K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
D Rpal_1563 type I secretion system ATPase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D Rpal_1326 ABC transporter domain protein K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein
D Rpal_1935 SbmABacA family protein K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein
D Rpal_2634 ABC transporter domain protein K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein
C 02060 Phosphotransferase system (PTS) [PATH:rpt02060]
D Rpal_0357 Phosphotransferase system, phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D Rpal_0358 PTS system fructose subfamily IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D Rpal_0609 PTSINtr with GAF domain, PtsP K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D Rpal_3408 putative PTS IIA-like nitrogen-regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D Rpal_0054 PTS IIA-like nitrogen-regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
C 03070 Bacterial secretion system [PATH:rpt03070]
D Rpal_2013 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein
D Rpal_2851 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein
D Rpal_3172 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D Rpal_3171 protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D Rpal_3694 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D Rpal_3232 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D Rpal_3647 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D Rpal_3173 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D Rpal_0636 60 kDa inner membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Rpal_0511 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Rpal_0207 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D Rpal_0304 protein-export protein SecB K03071 secB; preprotein translocase subunit SecB
D Rpal_0246 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D Rpal_3189 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA
D Rpal_3188 putative sec-independent protein translocase protein K03117 tatB; sec-independent protein translocase protein TatB
D Rpal_3187 Sec-independent protein translocase, TatC subunit K03118 tatC; sec-independent protein translocase protein TatC
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:rpt02020]
D Rpal_5267 PAS/PAC sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D Rpal_5261 two component transcriptional regulator, winged helix family K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D Rpal_0396 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D Rpal_5006 Alkaline phosphatase K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D Rpal_5266 phosphate ABC transporter, periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D Rpal_4257 phosphate ABC transporter, periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D Rpal_4851 integral membrane sensor signal transduction histidine kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D Rpal_4852 two component transcriptional regulator, winged helix family K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D Rpal_2140 protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D Rpal_5052 protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D Rpal_4002 protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D Rpal_1530 efflux transporter, RND family, MFP subunit K07799 mdtA; membrane fusion protein, multidrug efflux system
D Rpal_2842 efflux transporter, RND family, MFP subunit K07799 mdtA; membrane fusion protein, multidrug efflux system
D Rpal_3971 efflux transporter, RND family, MFP subunit K07799 mdtA; membrane fusion protein, multidrug efflux system
D Rpal_2843 acriflavin resistance protein K07788 mdtB; multidrug efflux pump
D Rpal_2844 acriflavin resistance protein K07789 mdtC; multidrug efflux pump
D Rpal_1604 efflux transporter, RND family, MFP subunit K07798 cusB; membrane fusion protein, copper/silver efflux system
D Rpal_1046 efflux transporter, RND family, MFP subunit K07798 cusB; membrane fusion protein, copper/silver efflux system
D Rpal_1603 heavy metal efflux pump, CzcA family K07787 cusA; copper/silver efflux system protein
D Rpal_1045 heavy metal efflux pump, CzcA family K07787 cusA; copper/silver efflux system protein
D Rpal_0707 flagellin domain protein K02406 fliC; flagellin
D Rpal_2540 protein of unknown function DUF1522 K02406 fliC; flagellin
D Rpal_4452 protein of unknown function DUF1522 K02406 fliC; flagellin
D Rpal_4438 protein of unknown function DUF1522 K02406 fliC; flagellin
D Rpal_2220 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA
D Rpal_3410 osmosensitive K+ channel signal transduction histidine kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D Rpal_3409 two component transcriptional regulator, winged helix family K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D Rpal_3413 potassium-transporting ATPase, A subunit K01546 kdpA; potassium-transporting ATPase potassium-binding subunit
D Rpal_3412 K+-transporting ATPase, B subunit K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6]
D Rpal_3411 potassium-transporting ATPase, C subunit K01548 kdpC; potassium-transporting ATPase KdpC subunit
D Rpal_4009 protein of unknown function DUF112 transmembrane K07793 tctA; putative tricarboxylic transport membrane protein
D Rpal_2563 protein of unknown function DUF112 transmembrane K07793 tctA; putative tricarboxylic transport membrane protein
D Rpal_4010 protein of unknown function DUF1468 K07794 tctB; putative tricarboxylic transport membrane protein
D Rpal_2564 protein of unknown function DUF1468 K07794 tctB; putative tricarboxylic transport membrane protein
D Rpal_5175 conserved hypothetical protein K07795 tctC; putative tricarboxylic transport membrane protein
D Rpal_4008 conserved hypothetical protein K07795 tctC; putative tricarboxylic transport membrane protein
D Rpal_3097 cytochrome oxidase assembly K02259 COX15; heme a synthase [EC:1.17.99.9]
D Rpal_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D Rpal_3048 Chromosomal replication initiator DnaA domain K02313 dnaA; chromosomal replication initiator protein
D Rpal_3374 Chromosomal replication initiator DnaA domain K02313 dnaA; chromosomal replication initiator protein
D Rpal_0650 Chromosomal replication initiator DnaA domain K02313 dnaA; chromosomal replication initiator protein
D Rpal_0360 integral membrane sensor signal transduction histidine kinase K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3]
D Rpal_0361 two component transcriptional regulator, winged helix family K14981 chvI; two-component system, OmpR family, response regulator ChvI
D Rpal_5039 Citryl-CoA lyase K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D Rpal_0232 Citryl-CoA lyase K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D Rpal_1793 fatty acid desaturase K10255 FAD6; acyl-lipid omega-6 desaturase (Delta-12 desaturase) [EC:1.14.19.23 1.14.19.45]
D Rpal_4197 Flp/Fap pilin component K02651 flp; pilus assembly protein Flp/PilA
D Rpal_0974 Flp/Fap pilin component K02651 flp; pilus assembly protein Flp/PilA
D Rpal_2088 Flp/Fap pilin component K02651 flp; pilus assembly protein Flp/PilA
D Rpal_4199 Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D Rpal_4615 Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D Rpal_4200 type II and III secretion system protein K02280 cpaC; pilus assembly protein CpaC
D Rpal_4202 putative pilus assembly protein CpaE K02282 cpaE; pilus assembly protein CpaE
D Rpal_4203 type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D Rpal_4204 type II secretion system protein K12510 tadB; tight adherence protein B
D Rpal_4205 type II secretion system protein K12511 tadC; tight adherence protein C
D Rpal_0594 UTP-GlnB uridylyltransferase, GlnD K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D Rpal_3314 nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1
D Rpal_2862 signal transduction histidine kinase, nitrogen specific, NtrB K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D Rpal_2863 nitrogen metabolism transcriptional regulator, NtrC, Fis Family K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D Rpal_1176 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Rpal_3315 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Rpal_4690 Glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Rpal_2864 multi-sensor signal transduction histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D Rpal_2865 two component, sigma54 specific, transcriptional regulator, Fis family K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D Rpal_1624 transcriptional regulator, NifA subfamily, Fis Family K02584 nifA; Nif-specific regulatory protein
D Rpal_5113 transcriptional regulator, NifA, Fis Family K02584 nifA; Nif-specific regulatory protein
D Rpal_3607 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rpal_0886 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rpal_1903 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rpal_4830 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rpal_0532 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rpal_2547 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rpal_3956 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rpal_1956 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rpal_4236 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rpal_0554 sodium:dicarboxylate symporter K11103 dctA; aerobic C4-dicarboxylate transport protein
D Rpal_2726 sodium:dicarboxylate symporter K11103 dctA; aerobic C4-dicarboxylate transport protein
D Rpal_0052 RNA polymerase, sigma 54 subunit, RpoN K03092 rpoN; RNA polymerase sigma-54 factor
D Rpal_1152 NADH ubiquinone oxidoreductase 20 kDa subunit K23548 hupU; uptake hydrogenase small subunit [EC:1.12.99.6]
D Rpal_1153 nickel-dependent hydrogenase large subunit K23549 hupV; uptake hydrogenase large subunit [EC:1.12.99.6]
D Rpal_1172 PAS/PAC sensor signal transduction histidine kinase K19661 hupT; two-component system, NtrC family, sensor histidine kinase HupT/HoxJ [EC:2.7.13.3]
D Rpal_1171 two component, sigma54 specific, transcriptional regulator, Fis family K19641 hupR; two-component system, NtrC family, response regulator HupR/HoxA
D Rpal_1154 hydrogenase (NiFe) small subunit HydA K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
D Rpal_1155 nickel-dependent hydrogenase large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6]
D Rpal_1156 Ni/Fe-hydrogenase, b-type cytochrome subunit K03620 hyaC; Ni/Fe-hydrogenase 1 B-type cytochrome subunit
D Rpal_0141 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D Rpal_1874 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D Rpal_1821 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D Rpal_3739 MCP methyltransferase, CheR-type K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D Rpal_0435 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor K03406 mcp; methyl-accepting chemotaxis protein
D Rpal_0142 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Rpal_1286 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Rpal_2054 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Rpal_4064 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Rpal_4787 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Rpal_4788 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Rpal_4783 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Rpal_4941 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Rpal_5119 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Rpal_5120 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Rpal_5172 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Rpal_1871 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor K03776 aer; aerotaxis receptor
D Rpal_0143 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D Rpal_0144 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D Rpal_1818 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D Rpal_1873 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D Rpal_0145 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Rpal_1817 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Rpal_1872 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Rpal_1366 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Rpal_0146 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Rpal_1819 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Rpal_1870 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Rpal_0140 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Rpal_1820 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Rpal_3424 GAF sensor signal transduction histidine kinase K11354 cph1; two-component system, chemotaxis family, sensor kinase Cph1 [EC:2.7.13.3]
D Rpal_3425 GAF sensor signal transduction histidine kinase K11354 cph1; two-component system, chemotaxis family, sensor kinase Cph1 [EC:2.7.13.3]
D Rpal_1726 putative PAS/PAC sensor protein K11354 cph1; two-component system, chemotaxis family, sensor kinase Cph1 [EC:2.7.13.3]
D Rpal_0125 GAF sensor signal transduction histidine kinase K11354 cph1; two-component system, chemotaxis family, sensor kinase Cph1 [EC:2.7.13.3]
D Rpal_2148 PAS/PAC sensor signal transduction histidine kinase K07716 pleC; two-component system, cell cycle sensor histidine kinase PleC [EC:2.7.13.3]
D Rpal_2185 integral membrane sensor signal transduction histidine kinase K07716 pleC; two-component system, cell cycle sensor histidine kinase PleC [EC:2.7.13.3]
D Rpal_3541 response regulator receiver modulated diguanylate cyclase K02488 pleD; two-component system, cell cycle response regulator [EC:2.7.7.65]
D Rpal_2063 multi-sensor signal transduction histidine kinase K11357 divJ; two-component system, cell cycle sensor histidine kinase DivJ [EC:2.7.13.3]
D Rpal_3542 response regulator receiver protein K11443 divK; two-component system, cell cycle response regulator DivK
D Rpal_4405 multi-sensor hybrid histidine kinase K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
D Rpal_1816 conserved hypothetical protein K13588 chpT; histidine phosphotransferase ChpT
D Rpal_1822 two component transcriptional regulator, winged helix family K13584 ctrA; two-component system, cell cycle response regulator CtrA
D Rpal_0976 response regulator receiver protein K13589 cpdR; two-component system, cell cycle response regulator CpdR
D Rpal_2260 TRAP dicarboxylate transporter, DctP subunit K11688 dctP; C4-dicarboxylate-binding protein DctP
D Rpal_2261 Tripartite ATP-independent periplasmic transporter DctQ component K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit
D Rpal_2262 TRAP dicarboxylate transporter, DctM subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D Rpal_4726 PAS/PAC sensor signal transduction histidine kinase K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3]
D Rpal_2535 multi-sensor signal transduction histidine kinase K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3]
D Rpal_4727 two component transcriptional regulator, LuxR family K14987 fixJ; two-component system, LuxR family, response regulator FixJ
D Rpal_4729 transcriptional regulator, Crp/Fnr family K15861 fixK; CRP/FNR family transcriptional regulator, nitrogen fixation regulation protein
D Rpal_1461 two component, sigma54 specific, transcriptional regulator, Fis family K10943 flrC; two-component system, response regulator FlrC
D Rpal_0148 response regulator receiver modulated metal dependent phosphohydrolase K13815 rpfG; two-component system, response regulator RpfG
D Rpal_4520 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D Rpal_4383 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D Rpal_4692 Glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D Rpal_0575 integral membrane sensor signal transduction histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D Rpal_0574 two component transcriptional regulator, Fis family K15012 regA; two-component system, response regulator RegA
D Rpal_1679 antenna complex alpha/beta subunit K08930 pucA; light-harvesting protein B-800-850 alpha chain
D Rpal_3421 antenna complex alpha/beta subunit K08930 pucA; light-harvesting protein B-800-850 alpha chain
D Rpal_3419 antenna complex alpha/beta subunit K08930 pucA; light-harvesting protein B-800-850 alpha chain
D Rpal_4771 antenna complex alpha/beta subunit K08930 pucA; light-harvesting protein B-800-850 alpha chain
D Rpal_2926 antenna complex alpha/beta subunit K08930 pucA; light-harvesting protein B-800-850 alpha chain
D Rpal_3422 antenna complex alpha/beta subunit K08939 pucB; light-harvesting protein B-800-850 beta chain
D Rpal_1678 antenna complex alpha/beta subunit K08939 pucB; light-harvesting protein B-800-850 beta chain
D Rpal_4770 antenna complex alpha/beta subunit K08939 pucB; light-harvesting protein B-800-850 beta chain
D Rpal_2927 antenna complex alpha/beta subunit K08939 pucB; light-harvesting protein B-800-850 beta chain
D Rpal_3418 antenna complex alpha/beta subunit K08939 pucB; light-harvesting protein B-800-850 beta chain
D Rpal_1717 photosynthetic reaction center, M subunit K08929 pufM; photosynthetic reaction center M subunit
D Rpal_1716 photosynthetic reaction center L subunit K08928 pufL; photosynthetic reaction center L subunit
D Rpal_1715 antenna complex alpha/beta subunit K08926 pufA; light-harvesting complex 1 alpha chain
D Rpal_1714 antenna complex alpha/beta subunit K08927 pufB; light-harvesting complex 1 beta chain
D Rpal_1736 photosynthetic reaction center H subunit K13991 puhA; photosynthetic reaction center H subunit
D Rpal_1384 ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D Rpal_1208 ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D Rpal_1385 cytochrome c1 K00410 fbcH; ubiquinol-cytochrome c reductase cytochrome b/c1 subunit
D Rpal_1724 cytochrome c class I K08738 CYC; cytochrome c
D Rpal_4215 cytochrome c class I K08738 CYC; cytochrome c
D Rpal_0020 cytochrome c oxidase, cbb3-type, subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D Rpal_0019 cytochrome c oxidase, cbb3-type, subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D Rpal_0018 Cbb3-type cytochrome oxidase component K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D Rpal_0017 cytochrome c oxidase, cbb3-type, subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D Rpal_1533 cytochrome bd ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D Rpal_5279 cytochrome bd ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D Rpal_1534 cytochrome bd ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D Rpal_5280 cytochrome d ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D Rpal_2013 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein
D Rpal_2851 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein
D Rpal_5320 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D Rpal_3782 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D Rpal_3091 lipopolysaccharide biosynthesis protein K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D Rpal_4578 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D Rpal_5064 glycoside hydrolase family 5 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D Rpal_3700 anti-FecI sigma factor, FecR K07165 fecR; transmembrane sensor
D Rpal_2623 anti-FecI sigma factor, FecR K07165 fecR; transmembrane sensor
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis [PATH:rpt04148]
D Rpal_5210 arginase K01476 rocF; arginase [EC:3.5.3.1]
D Rpal_2341 Ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D Rpal_0938 Ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D Rpal_1384 ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D Rpal_1208 ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:rpt02024]
D Rpal_2867 RNA chaperone Hfq K03666 hfq; host factor-I protein
D Rpal_2197 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D Rpal_0028 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D Rpal_3592 phenazine biosynthesis protein PhzF family K06998 phzF; trans-2,3-dihydro-3-hydroxyanthranilate isomerase [EC:5.3.3.17]
D Rpal_3409 two component transcriptional regulator, winged helix family K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D Rpal_0322 putative autoinducer (acylhomoserine lactone) synthase K18096 bjaI; acyl-homoserine lactone synthase [EC:2.3.1.228 2.3.1.229 2.3.1.-]
D Rpal_2331 autoinducer synthesis protein K18096 bjaI; acyl-homoserine lactone synthase [EC:2.3.1.228 2.3.1.229 2.3.1.-]
D Rpal_0323 transcriptional regulator, LuxR family K18098 bjaR1; LuxR family transcriptional regulator, quorum-sensing system regulator BjaR1
D Rpal_2330 transcriptional regulator, LuxR family K18098 bjaR1; LuxR family transcriptional regulator, quorum-sensing system regulator BjaR1
D Rpal_1847 putative rhizosphere induced protein K20270 rhiC; rhizosphere induced protein
D Rpal_5129 extracellular solute-binding protein family 1 K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D Rpal_1663 extracellular solute-binding protein family 1 K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D Rpal_1664 binding-protein-dependent transport systems inner membrane component K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D Rpal_1665 binding-protein-dependent transport systems inner membrane component K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D Rpal_5130 binding-protein-dependent transport systems inner membrane component K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D Rpal_1666 ABC transporter related K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D Rpal_5131 spermidine/putrescine ABC transporter ATPase subunit K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D Rpal_0110 putative ABC transporter; putative branched-chain amino acid transporter K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rpal_4244 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rpal_4245 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rpal_0486 substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rpal_2487 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rpal_1177 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rpal_0735 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rpal_4549 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rpal_4559 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rpal_4564 extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rpal_4575 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rpal_2079 branched chain amino acid transport system substrate binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rpal_3503 putative ABC transporter, substrate binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rpal_1941 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rpal_1948 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rpal_4882 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rpal_1850 putative ABC transporter, substrate binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rpal_4334 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rpal_5300 putative periplasmic substrate binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rpal_1991 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rpal_2248 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rpal_2001 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rpal_4000 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rpal_1428 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rpal_1559 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rpal_4246 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rpal_5294 putative ABC-type branched-chain amino acid transporter, periplasmic binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rpal_0583 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rpal_1598 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rpal_1842 conserved hypothetical protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rpal_3830 branched-chain amino acid ABC transporter, periplasmic binding protein, putative K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rpal_1752 putative UreA/short-chain amide transport system substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rpal_4650 putative ABC transporter (substrate-binding protein); putative branched-chain amino acid transporter K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rpal_3718 branched-chain amino acid ABC transporter, periplasmic binding protein, putative K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rpal_4242 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Rpal_1423 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Rpal_2519 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Rpal_1178 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Rpal_0734 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Rpal_1753 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Rpal_4550 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Rpal_4558 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Rpal_4565 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Rpal_4573 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Rpal_1940 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Rpal_1949 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Rpal_4885 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Rpal_4330 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Rpal_1995 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Rpal_3829 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Rpal_3717 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Rpal_1555 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Rpal_1601 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Rpal_0733 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Rpal_1754 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Rpal_1994 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Rpal_1556 inner-membrane translocator K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Rpal_1602 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D Rpal_1424 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D Rpal_1179 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D Rpal_1939 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D Rpal_1950 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D Rpal_2520 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D Rpal_4331 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D Rpal_4243 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D Rpal_4551 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D Rpal_4557 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D Rpal_4566 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D Rpal_4574 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D Rpal_4886 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D Rpal_4240 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Rpal_1425 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Rpal_2517 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Rpal_1180 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Rpal_1599 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Rpal_4552 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Rpal_4556 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Rpal_4567 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Rpal_4571 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Rpal_1951 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Rpal_4883 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Rpal_4332 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Rpal_3715 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Rpal_1557 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Rpal_3827 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Rpal_1558 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Rpal_1426 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Rpal_1755 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Rpal_1600 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Rpal_1181 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Rpal_0732 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Rpal_1952 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Rpal_1993 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Rpal_2518 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Rpal_3826 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Rpal_3714 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Rpal_4333 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Rpal_4241 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Rpal_4576 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Rpal_4553 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Rpal_4555 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Rpal_4568 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Rpal_4884 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Rpal_4746 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Rpal_4572 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Rpal_1967 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Rpal_4237 dicarboxylate/CoA ligase PimA K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Rpal_1427 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Rpal_5310 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Rpal_2434 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Rpal_4908 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Rpal_1635 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Rpal_0148 response regulator receiver modulated metal dependent phosphohydrolase K13815 rpfG; two-component system, response regulator RpfG
D Rpal_4520 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D Rpal_4383 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D Rpal_0518 ferric uptake regulator, Fur family K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D Rpal_3006 riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D Rpal_4297 efflux transporter, RND family, MFP subunit K18306 mexH; membrane fusion protein, multidrug efflux system
D Rpal_4296 acriflavin resistance protein K18307 mexI; multidrug efflux pump
D Rpal_2841 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system
D Rpal_1411 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Rpal_1660 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Rpal_2571 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Rpal_0833 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Rpal_0106 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Rpal_2941 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Rpal_2913 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Rpal_2918 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Rpal_1632 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Rpal_0832 4-phytase K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Rpal_1409 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Rpal_1633 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Rpal_2572 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Rpal_0831 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Rpal_2917 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Rpal_0105 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Rpal_1659 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Rpal_1408 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Rpal_1658 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Rpal_1634 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Rpal_2573 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Rpal_0830 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Rpal_2916 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Rpal_0104 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Rpal_1630 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Rpal_0826 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Rpal_0103 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Rpal_1407 ABC transporter related K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Rpal_1656 ABC transporter related K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Rpal_2574 ABC transporter related K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Rpal_2915 ABC transporter related K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Rpal_1631 oligopeptide/dipeptide ABC transporter, ATPase subunit K02032 ddpF; peptide/nickel transport system ATP-binding protein
D Rpal_0102 oligopeptide/dipeptide ABC transporter, ATPase subunit K02032 ddpF; peptide/nickel transport system ATP-binding protein
D Rpal_0829 oligopeptide/dipeptide ABC transporter, ATPase subunit K02032 ddpF; peptide/nickel transport system ATP-binding protein
D Rpal_0636 60 kDa inner membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Rpal_3694 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D Rpal_3232 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D Rpal_3647 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D Rpal_3173 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D Rpal_0511 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Rpal_0207 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D Rpal_0304 protein-export protein SecB K03071 secB; preprotein translocase subunit SecB
D Rpal_0246 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:rpt02030]
D Rpal_0435 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor K03406 mcp; methyl-accepting chemotaxis protein
D Rpal_0142 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Rpal_1286 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Rpal_2054 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Rpal_4064 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Rpal_4787 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Rpal_4788 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Rpal_4783 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Rpal_4941 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Rpal_5119 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Rpal_5120 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Rpal_5172 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Rpal_1871 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor K03776 aer; aerotaxis receptor
D Rpal_0145 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Rpal_1817 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Rpal_1872 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Rpal_0143 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D Rpal_0144 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D Rpal_1818 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D Rpal_1873 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D Rpal_1366 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Rpal_0146 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Rpal_1819 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Rpal_1870 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Rpal_1335 putative chemotaxis phosphatase, CheZ K03414 cheZ; chemotaxis protein CheZ
D Rpal_0140 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Rpal_1820 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Rpal_3739 MCP methyltransferase, CheR-type K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D Rpal_0141 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D Rpal_1874 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D Rpal_1821 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D Rpal_1458 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D Rpal_4420 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D Rpal_1460 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D Rpal_3578 surface presentation of antigens (SPOA) protein K02417 fliN; flagellar motor switch protein FliN
D Rpal_2220 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA
D Rpal_2221 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
D Rpal_3243 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
D Rpal_0991 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:rpt02040]
D Rpal_4409 flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D Rpal_1457 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D Rpal_1458 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D Rpal_1459 flagellar assembly protein H K02411 fliH; flagellar assembly protein FliH
D Rpal_1823 flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D Rpal_1824 flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ
D Rpal_1495 flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK
D Rpal_4421 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D Rpal_4420 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D Rpal_1460 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D Rpal_3578 surface presentation of antigens (SPOA) protein K02417 fliN; flagellar motor switch protein FliN
D Rpal_4412 putative exported protein of unknown function K02418 fliO; flagellar protein FliO/FliZ
D Rpal_4413 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D Rpal_4408 export protein FliQ family 3 K02420 fliQ; flagellar biosynthesis protein FliQ
D Rpal_4407 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D Rpal_1828 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D Rpal_4406 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D Rpal_4424 flagella basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D Rpal_4411 flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D Rpal_4410 flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D Rpal_0101 protein of unknown function DUF1078 domain protein K02388 flgC; flagellar basal-body rod protein FlgC
D Rpal_0711 flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D Rpal_1494 flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D Rpal_4455 protein of unknown function DUF1078 domain protein K02390 flgE; flagellar hook protein FlgE
D Rpal_0712 flagellar basal body FlaE domain protein K02390 flgE; flagellar hook protein FlgE
D Rpal_1843 protein of unknown function DUF1078 domain protein K02390 flgE; flagellar hook protein FlgE
D Rpal_4422 flagellar basal body rod protein K02391 flgF; flagellar basal-body rod protein FlgF
D Rpal_2294 flagellar basal body rod protein K02391 flgF; flagellar basal-body rod protein FlgF
D Rpal_4423 flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D Rpal_4425 flagellar L-ring protein K02393 flgH; flagellar L-ring protein FlgH
D Rpal_4432 flagellar P-ring protein K02394 flgI; flagellar P-ring protein FlgI
D Rpal_4433 chemotactic signal-response protein CheL K02395 flgJ; peptidoglycan hydrolase FlgJ
D Rpal_4454 flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D Rpal_0715 flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D Rpal_0716 flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D Rpal_4453 conserved hypothetical protein K02397 flgL; flagellar hook-associated protein 3 FlgL
D Rpal_0707 flagellin domain protein K02406 fliC; flagellin
D Rpal_2540 protein of unknown function DUF1522 K02406 fliC; flagellin
D Rpal_4452 protein of unknown function DUF1522 K02406 fliC; flagellin
D Rpal_4438 protein of unknown function DUF1522 K02406 fliC; flagellin
D Rpal_0708 flagellar hook-associated 2 domain protein K02407 fliD; flagellar hook-associated protein 2
D Rpal_0709 putative flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS
D Rpal_2220 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA
D Rpal_2221 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
D Rpal_3243 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
D Rpal_0991 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
D Rpal_1481 RNA polymerase, sigma 70 subunit, RpoD family K03086 rpoD; RNA polymerase primary sigma factor
D Rpal_0052 RNA polymerase, sigma 54 subunit, RpoN K03092 rpoN; RNA polymerase sigma-54 factor
D Rpal_1461 two component, sigma54 specific, transcriptional regulator, Fis family K10943 flrC; two-component system, response regulator FlrC
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D Rpal_3216 Phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism [PATH:rpt04980]
D Rpal_5233 ATP/cobalamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D Rpal_2033 LAO/AO transport system ATPase K07588 MMAA; GTPase [EC:3.6.5.-]
D Rpal_2039 methylmalonyl-CoA mutase, large subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D Rpal_2041 Methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D Rpal_4224 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:rpt01501]
D Rpal_0623 major facilitator superfamily MFS_1 K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D Rpal_3192 Beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D Rpal_0366 Beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D Rpal_4427 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Rpal_1684 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Rpal_2614 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Rpal_0099 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Rpal_4426 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family K18138 acrB; multidrug efflux pump
D Rpal_1685 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family K18138 acrB; multidrug efflux pump
D Rpal_0100 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family K18138 acrB; multidrug efflux pump
D Rpal_2841 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system
D Rpal_2611 integral membrane sensor signal transduction histidine kinase K18143 adeS; two-component system, OmpR family, sensor histidine kinase AdeS [EC:2.7.13.3]
D Rpal_2612 two component transcriptional regulator, winged helix family K18144 adeR; two-component system, OmpR family, response regulator AdeR
D Rpal_2013 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein
D Rpal_2851 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein
D Rpal_2073 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Rpal_2730 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Rpal_0580 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Rpal_4054 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:rpt01502]
D Rpal_4043 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Rpal_3495 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D Rpal_4052 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D Rpal_4051 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D Rpal_4048 Undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:rpt01503]
D Rpal_2729 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Rpal_2140 protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D Rpal_5052 protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D Rpal_4002 protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D Rpal_4427 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Rpal_1684 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Rpal_2614 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Rpal_0099 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Rpal_4426 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family K18138 acrB; multidrug efflux pump
D Rpal_1685 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family K18138 acrB; multidrug efflux pump
D Rpal_0100 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family K18138 acrB; multidrug efflux pump
D Rpal_2013 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein
D Rpal_2851 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein
D Rpal_3257 acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:rpt01000]
C 01001 Protein kinases [BR:rpt01001]
D Rpal_3091 lipopolysaccharide biosynthesis protein K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D Rpal_3777 capsular exopolysaccharide family K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D Rpal_5065 lipopolysaccharide biosynthesis protein K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D Rpal_5267 PAS/PAC sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D Rpal_4851 integral membrane sensor signal transduction histidine kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D Rpal_3410 osmosensitive K+ channel signal transduction histidine kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D Rpal_0360 integral membrane sensor signal transduction histidine kinase K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3]
D Rpal_2611 integral membrane sensor signal transduction histidine kinase K18143 adeS; two-component system, OmpR family, sensor histidine kinase AdeS [EC:2.7.13.3]
D Rpal_2862 signal transduction histidine kinase, nitrogen specific, NtrB K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D Rpal_2864 multi-sensor signal transduction histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D Rpal_1172 PAS/PAC sensor signal transduction histidine kinase K19661 hupT; two-component system, NtrC family, sensor histidine kinase HupT/HoxJ [EC:2.7.13.3]
D Rpal_2427 integral membrane sensor hybrid histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D Rpal_0145 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Rpal_1817 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Rpal_1872 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Rpal_3424 GAF sensor signal transduction histidine kinase K11354 cph1; two-component system, chemotaxis family, sensor kinase Cph1 [EC:2.7.13.3]
D Rpal_3425 GAF sensor signal transduction histidine kinase K11354 cph1; two-component system, chemotaxis family, sensor kinase Cph1 [EC:2.7.13.3]
D Rpal_1726 putative PAS/PAC sensor protein K11354 cph1; two-component system, chemotaxis family, sensor kinase Cph1 [EC:2.7.13.3]
D Rpal_0125 GAF sensor signal transduction histidine kinase K11354 cph1; two-component system, chemotaxis family, sensor kinase Cph1 [EC:2.7.13.3]
D Rpal_2148 PAS/PAC sensor signal transduction histidine kinase K07716 pleC; two-component system, cell cycle sensor histidine kinase PleC [EC:2.7.13.3]
D Rpal_2185 integral membrane sensor signal transduction histidine kinase K07716 pleC; two-component system, cell cycle sensor histidine kinase PleC [EC:2.7.13.3]
D Rpal_2063 multi-sensor signal transduction histidine kinase K11357 divJ; two-component system, cell cycle sensor histidine kinase DivJ [EC:2.7.13.3]
D Rpal_4405 multi-sensor hybrid histidine kinase K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
D Rpal_4726 PAS/PAC sensor signal transduction histidine kinase K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3]
D Rpal_2535 multi-sensor signal transduction histidine kinase K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3]
D Rpal_0575 integral membrane sensor signal transduction histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:rpt01009]
D Rpal_4545 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D Rpal_5302 heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG
D Rpal_2240 phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:rpt01002]
D Rpal_4860 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D Rpal_4198 peptidase A24A prepilin type IV K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D Rpal_1157 hydrogenase expression/formation protein K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-]
D Rpal_2032 peptidase C15 pyroglutamyl peptidase I K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3]
D Rpal_0422 glutamine amidotransferase class-I K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D Rpal_2498 GMP synthase, large subunit K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D Rpal_1649 peptidase C26 K07010 K07010; putative glutamine amidotransferase
D Rpal_3501 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D Rpal_0959 Glutamate synthase (ferredoxin) K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D Rpal_2934 glucosamine/fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D Rpal_4592 asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D Rpal_1491 intracellular protease, PfpI family K05520 yhbO; deglycase [EC:3.5.1.124]
D Rpal_2700 ThiJ/PfpI domain protein K18199 inhA; cyclohexyl-isocyanide hydratase [EC:4.2.1.103]
D Rpal_4668 Peptidoglycan-binding domain 1 protein K21470 ycbB; L,D-transpeptidase YcbB
D Rpal_3435 Abortive infection protein K07052 K07052; CAAX protease family protein
D Rpal_0940 Peptidyl-dipeptidase Dcp K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5]
D Rpal_4665 oligoendopeptidase, pepF/M3 family K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D Rpal_4858 peptidase M16 domain protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D Rpal_4857 peptidase M16 domain protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D Rpal_3470 Leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D Rpal_4207 Leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D Rpal_1410 peptidase M20 K01295 cpg; glutamate carboxypeptidase [EC:3.4.17.11]
D Rpal_0628 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D Rpal_0416 peptidase M20 K13049 PM20D1; carboxypeptidase PM20D1 [EC:3.4.17.-]
D Rpal_3303 peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D Rpal_0392 methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D Rpal_4033 peptidase M24 K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D Rpal_1317 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D Rpal_0855 peptidase M48 Ste24p K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D Rpal_4986 peptidase M48 Ste24p K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D Rpal_3261 membrane-associated zinc metalloprotease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D Rpal_0394 peptidase U6 penicillin-insensitive murein endopeptidase K07261 mepA; penicillin-insensitive murein DD-endopeptidase [EC:3.4.24.-]
D Rpal_2140 protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D Rpal_5052 protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D Rpal_4002 protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D Rpal_1758 Oligopeptidase B K01354 ptrB; oligopeptidase B [EC:3.4.21.83]
D Rpal_3113 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D Rpal_3309 Endopeptidase Clp K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D Rpal_1126 conserved hypothetical protein K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D Rpal_3307 ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D Rpal_2272 ATPase associated with various cellular activities AAA_5 K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D Rpal_3813 AAA ATPase central domain protein K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D Rpal_1150 ATPase associated with various cellular activities AAA_5 K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D Rpal_1511 ATPase associated with various cellular activities AAA_5 K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D Rpal_3249 transcriptional repressor, LexA family K01356 lexA; repressor LexA [EC:3.4.21.88]
D Rpal_3360 putative phage repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D Rpal_3373 transcriptional repressor, LexA family K01356 lexA; repressor LexA [EC:3.4.21.88]
D Rpal_0892 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D Rpal_2971 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D Rpal_4151 proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D Rpal_3112 alpha/beta hydrolase fold K27108 ephA_B; epoxide hydrolase A/B [EC:3.3.2.-]
D Rpal_0164 carboxyl-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D Rpal_0593 carboxyl-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D Rpal_0068 signal peptide peptidase SppA, 36K type K04773 sppA; protease IV [EC:3.4.21.-]
D Rpal_2095 phage prohead protease, HK97 family K06904 GP4; Escherichia/Staphylococcus phage prohead protease
D Rpal_3979 phage prohead protease, HK97 family K06904 GP4; Escherichia/Staphylococcus phage prohead protease
D Rpal_0310 20S proteasome A and B subunits K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D Rpal_0026 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D Rpal_0844 Gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D Rpal_2575 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D Rpal_4906 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D Rpal_1004 peptidase U32 K24845 ubiV; O2-independent ubiquinone biosynthesis protein UbiV
D Rpal_1003 peptidase U32 K24844 ubiU; O2-independent ubiquinone biosynthesis protein UbiU
D Rpal_1346 peptidase U62 modulator of DNA gyrase K03592 pmbA; PmbA protein
D Rpal_0893 peptidase U62 modulator of DNA gyrase K03568 tldD; TldD protein
D Rpal_2823 alpha-2-macroglobulin domain protein K06894 yfhM; alpha-2-macroglobulin
D Rpal_4004 HflC protein K04087 hflC; modulator of FtsH protease HflC
D Rpal_4005 HflK protein K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases [BR:rpt01003]
D Rpal_4305 glycosyl transferase family 2 K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83]
D Rpal_4490 glycosyl transferase group 1 K27597 K27597; 1,2-diacylglycerol 3-alpha-glucosyltransferase/glucuronosyltransferase [EC:2.4.1.337 2.4.1.-]
D Rpal_0386 glycogen/starch synthase, ADP-glucose type K00703 glgA; starch synthase [EC:2.4.1.21]
D Rpal_0526 monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D Rpal_2824 penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D Rpal_2073 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Rpal_2730 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Rpal_0580 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Rpal_5063 glycosyl transferase, WecB/TagA/CpsF family K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D Rpal_3221 glycosyl transferase family 2 K03669 mdoH; membrane glycosyltransferase [EC:2.4.1.-]
D Rpal_3836 Alpha,alpha-trehalose-phosphate synthase (UDP-forming) K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
D Rpal_5141 alpha,alpha-trehalose-phosphate synthase (UDP-forming) K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:rpt01005]
D Rpal_3257 acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D Rpal_3255 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D Rpal_4039 UDP-3-0-acyl N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D Rpal_3259 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D Rpal_0398 phosphoesterase PA-phosphatase related K12978 lpxF; lipid A 4'-phosphatase [EC:3.1.3.-]
D Rpal_3256 protein of unknown function DUF1009 K09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D Rpal_1350 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D Rpal_2228 lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D Rpal_1349 Three-deoxy-D-manno-octulosonic-acid transferase domain protein K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D Rpal_3223 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D Rpal_4216 3-deoxy-D-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D Rpal_0947 KpsF/GutQ family protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D Rpal_4512 lipopolysaccharide heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D Rpal_4509 lipopolysaccharide heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D Rpal_2805 glycosyl transferase group 1 K02844 waaG; UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-]
D Rpal_4510 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D Rpal_4511 histidinol-phosphate phosphatase family protein K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D Rpal_4507 rfaE bifunctional protein K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D Rpal_4508 ADP-L-glycero-D-manno-heptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D Rpal_1339 glycosyl transferase family 2 K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:rpt01011]
D Rpal_5024 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D Rpal_4046 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D Rpal_4047 UDP-N-acetylmuramate/alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D Rpal_4050 UDP-N-acetylmuramoylalanine/D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D Rpal_4053 UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D Rpal_4043 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Rpal_3495 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D Rpal_1780 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D Rpal_4051 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D Rpal_4048 Undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D Rpal_0045 undecaprenol kinase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D Rpal_0460 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D Rpal_4500 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D Rpal_2073 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Rpal_2730 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Rpal_0580 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Rpal_2824 penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D Rpal_4054 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D Rpal_3113 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D Rpal_0526 monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D Rpal_4668 Peptidoglycan-binding domain 1 protein K21470 ycbB; L,D-transpeptidase YcbB
D Rpal_0394 peptidase U6 penicillin-insensitive murein endopeptidase K07261 mepA; penicillin-insensitive murein DD-endopeptidase [EC:3.4.24.-]
D Rpal_2697 Lytic transglycosylase catalytic K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D Rpal_0306 MltA domain protein K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29]
D Rpal_2790 lytic murein transglycosylase K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D Rpal_0968 lytic murein transglycosylase K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D Rpal_3481 aminodeoxychorismate lyase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D Rpal_3111 rare lipoprotein A K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D Rpal_0175 rare lipoprotein A K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D Rpal_0699 rare lipoprotein A K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D Rpal_2729 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:rpt01004]
D Rpal_3485 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D Rpal_3020 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D Rpal_0430 Beta-ketoacyl synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D Rpal_2230 Beta-ketoacyl synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Rpal_2231 Beta-ketoacyl synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Rpal_3482 3-oxoacyl-(acyl-carrier-protein) synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Rpal_3484 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Rpal_3725 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Rpal_1879 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Rpal_2453 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Rpal_0963 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Rpal_0964 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Rpal_5077 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Rpal_5138 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Rpal_3838 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Rpal_0480 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Rpal_0429 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D Rpal_2232 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D Rpal_3258 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D Rpal_0431 short-chain dehydrogenase/reductase SDR K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D Rpal_1392 short-chain dehydrogenase/reductase SDR K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D Rpal_5048 short-chain dehydrogenase/reductase SDR K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D Rpal_0190 lipolytic protein G-D-S-L family K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D Rpal_0272 acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D Rpal_1793 fatty acid desaturase K10255 FAD6; acyl-lipid omega-6 desaturase (Delta-12 desaturase) [EC:1.14.19.23 1.14.19.45]
D Rpal_0209 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Rpal_2545 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Rpal_3934 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Rpal_4996 AMP-dependent synthetase and ligase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D Rpal_4746 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Rpal_4572 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Rpal_1967 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Rpal_4237 dicarboxylate/CoA ligase PimA K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Rpal_1427 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Rpal_5310 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Rpal_2434 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Rpal_4908 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Rpal_1635 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Rpal_0814 AMP-dependent synthetase and ligase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D Rpal_0462 AMP-dependent synthetase and ligase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D Rpal_5072 AMP-dependent synthetase and ligase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D Rpal_2990 AMP-dependent synthetase and ligase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D Rpal_4178 AMP-dependent synthetase and ligase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D Rpal_3019 fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D Rpal_3529 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D Rpal_5215 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:rpt01008]
D Rpal_2630 AMP-dependent synthetase and ligase K24110 asbC; 3,4-dihydroxybenzoate---[aryl-carrier protein] ligase [EC:6.2.1.62]
D Rpal_2629 conserved hypothetical protein K24112 asbE; petrobactin synthase [EC:2.-.-.-]
C 01006 Prenyltransferases [BR:rpt01006]
D Rpal_0525 Polyprenyl synthetase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D Rpal_1707 Polyprenyl synthetase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D Rpal_1232 Polyprenyl synthetase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D Rpal_3264 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D Rpal_1700 Squalene/phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D Rpal_3169 putative phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D Rpal_2241 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D Rpal_1344 4-hydroxybenzoate polyprenyl transferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D Rpal_0901 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D Rpal_1719 bacteriochlorophyll/chlorophyll synthetase K04040 chlG; chlorophyll/bacteriochlorophyll a synthase [EC:2.5.1.62 2.5.1.133]
C 01007 Amino acid related enzymes [BR:rpt01007]
D Rpal_5166 lysyl-tRNA synthetase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D Rpal_3252 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Rpal_3251 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D Rpal_5237 glutamyl-tRNA synthetase class Ic K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D Rpal_2738 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Rpal_0459 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D Rpal_2208 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D Rpal_3194 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Rpal_3116 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D Rpal_4861 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D Rpal_2853 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D Rpal_0290 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Rpal_3453 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Rpal_1369 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D Rpal_1237 glycyl-tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D Rpal_1239 glycyl-tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D Rpal_3185 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D Rpal_3276 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D Rpal_3886 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D Rpal_4372 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Rpal_0038 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D Rpal_0036 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D Rpal_4809 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Rpal_2782 aminotransferase class I and II K14261 alaC; alanine-synthesizing transaminase [EC:2.6.1.-]
D Rpal_2224 aminotransferase class I and II K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
D Rpal_4927 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Rpal_1742 5-aminolevulinic acid synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37]
D Rpal_0922 5-aminolevulinic acid synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37]
D Rpal_3320 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D Rpal_1370 Beta-alanine--pyruvate transaminase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D Rpal_4253 aminotransferase class-III K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13]
D Rpal_5259 acetylornithine and succinylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D Rpal_2567 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D Rpal_3318 adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D Rpal_2866 aminotransferase class IV K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D Rpal_4854 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Rpal_5073 aminotransferase class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Rpal_0857 aminotransferase class V K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D Rpal_4790 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00199 Cytochrome P450 [BR:rpt00199]
D Rpal_2077 cytochrome P450 K22553 CYP199A2; 4-methoxybenzoate monooxygenase (O-demethylating) [EC:1.14.99.15]
C 00194 Photosynthesis proteins [BR:rpt00194]
D Rpal_0170 ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D Rpal_1056 alternate F1F0 ATPase, F1 subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D Rpal_0171 ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D Rpal_1057 ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D Rpal_0172 ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D Rpal_1049 H+transporting two-sector ATPase gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D Rpal_0173 ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D Rpal_1050 ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D Rpal_0174 ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D Rpal_0911 H+transporting two-sector ATPase B/B' subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D Rpal_0912 H+transporting two-sector ATPase B/B' subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D Rpal_1051 H+transporting two-sector ATPase B/B' subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D Rpal_0913 H+transporting two-sector ATPase C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D Rpal_1052 ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D Rpal_0914 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D Rpal_1053 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D Rpal_1055 F0F1-ATPase subunit K02116 atpI; ATP synthase protein I
D Rpal_0915 FoF1 ATP synthase, subunit I K02116 atpI; ATP synthase protein I
D Rpal_1716 photosynthetic reaction center L subunit K08928 pufL; photosynthetic reaction center L subunit
D Rpal_1717 photosynthetic reaction center, M subunit K08929 pufM; photosynthetic reaction center M subunit
D Rpal_1736 photosynthetic reaction center H subunit K13991 puhA; photosynthetic reaction center H subunit
D Rpal_1715 antenna complex alpha/beta subunit K08926 pufA; light-harvesting complex 1 alpha chain
D Rpal_1714 antenna complex alpha/beta subunit K08927 pufB; light-harvesting complex 1 beta chain
D Rpal_1679 antenna complex alpha/beta subunit K08930 pucA; light-harvesting protein B-800-850 alpha chain
D Rpal_3421 antenna complex alpha/beta subunit K08930 pucA; light-harvesting protein B-800-850 alpha chain
D Rpal_3419 antenna complex alpha/beta subunit K08930 pucA; light-harvesting protein B-800-850 alpha chain
D Rpal_4771 antenna complex alpha/beta subunit K08930 pucA; light-harvesting protein B-800-850 alpha chain
D Rpal_2926 antenna complex alpha/beta subunit K08930 pucA; light-harvesting protein B-800-850 alpha chain
D Rpal_3422 antenna complex alpha/beta subunit K08939 pucB; light-harvesting protein B-800-850 beta chain
D Rpal_1678 antenna complex alpha/beta subunit K08939 pucB; light-harvesting protein B-800-850 beta chain
D Rpal_4770 antenna complex alpha/beta subunit K08939 pucB; light-harvesting protein B-800-850 beta chain
D Rpal_2927 antenna complex alpha/beta subunit K08939 pucB; light-harvesting protein B-800-850 beta chain
D Rpal_3418 antenna complex alpha/beta subunit K08939 pucB; light-harvesting protein B-800-850 beta chain
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:rpt03000]
D Rpal_3927 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Rpal_0352 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Rpal_4364 transcriptional regulator, AraC family K12243 pchR; AraC family transcriptional regulator, transcriptional activator of the genes for pyochelin and ferripyochelin receptors
D Rpal_1200 transcriptional regulator, AraC family K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D Rpal_0946 transcriptional regulator, AraC family K13652 K13652; AraC family transcriptional regulator
D Rpal_1543 transcriptional regulator, AraC family K07506 K07506; AraC family transcriptional regulator
D Rpal_1268 transcriptional regulator, AraC family K07506 K07506; AraC family transcriptional regulator
D Rpal_2401 transcriptional regulator, AraC family K07506 K07506; AraC family transcriptional regulator
D Rpal_1524 transcriptional regulator, AraC family K07506 K07506; AraC family transcriptional regulator
D Rpal_1537 transcriptional regulator, AraC family K07506 K07506; AraC family transcriptional regulator
D Rpal_0344 transcriptional regulator, AraC family K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D Rpal_4259 transcriptional regulator, LysR family K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D Rpal_2566 transcriptional regulator, LysR family K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D Rpal_3403 transcriptional regulator, LysR family K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA
D Rpal_0434 transcriptional regulator, LysR family K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D Rpal_5176 transcriptional regulator, LysR family K19338 nac; LysR family transcriptional regulator, nitrogen assimilation regulatory protein
D Rpal_1743 transcriptional regulator, LysR family K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
D Rpal_0133 transcriptional regulator, LysR family K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
D Rpal_4896 transcriptional regulator, DeoR family K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D Rpal_1565 transcriptional regulator, DeoR family K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D Rpal_0763 transcriptional regulator, GntR family K02043 phnF; GntR family transcriptional regulator, phosphonate transport system regulatory protein
D Rpal_2247 GntR domain protein K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D Rpal_3136 transcriptional regulator, GntR family with aminotransferase domain K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D Rpal_0109 transcriptional regulator, GntR family with aminotransferase domain K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D Rpal_4140 transcriptional regulator, GntR family K11475 vanR; GntR family transcriptional regulator, vanillate catabolism transcriptional regulator
D Rpal_3933 transcriptional regulator, GntR family K15735 csiR; GntR family transcriptional regulator, carbon starvation induced regulator
D Rpal_3941 transcriptional regulator, TetR family K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D Rpal_0097 transcriptional regulator, TetR family K18301 mexL; TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor
D Rpal_3316 transcriptional regulator, TetR family K23777 cecR; TetR/AcrR family transcriptional regulator, regulator of cefoperazone and chloramphenicol sensitivity
D Rpal_0376 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D Rpal_0010 transcriptional regulator, AsnC family K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
D Rpal_0323 transcriptional regulator, LuxR family K18098 bjaR1; LuxR family transcriptional regulator, quorum-sensing system regulator BjaR1
D Rpal_2330 transcriptional regulator, LuxR family K18098 bjaR1; LuxR family transcriptional regulator, quorum-sensing system regulator BjaR1
D Rpal_0517 transcriptional regulator, MarR family K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D Rpal_0896 transcriptional regulator, MarR family K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D Rpal_2296 transcriptional regulator, MarR family K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D Rpal_0540 transcriptional regulator, MarR family K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D Rpal_2290 transcriptional regulator, MarR family K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D Rpal_0454 ferric uptake regulator, Fur family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D Rpal_0518 ferric uptake regulator, Fur family K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D Rpal_0428 ferric uptake regulator, Fur family K09826 irr; Fur family transcriptional regulator, iron response regulator
D Rpal_2583 ferric uptake regulator, Fur family K09826 irr; Fur family transcriptional regulator, iron response regulator
D Rpal_1174 transcriptional regulator, IclR family K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein
D Rpal_4520 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D Rpal_4383 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D Rpal_4713 transcriptional regulator, Crp/Fnr family K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D Rpal_1280 transcriptional regulator, Crp/Fnr family K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D Rpal_4729 transcriptional regulator, Crp/Fnr family K15861 fixK; CRP/FNR family transcriptional regulator, nitrogen fixation regulation protein
D Rpal_0740 transcriptional regulator, Crp/Fnr family K21563 dnr; CRP/FNR family transcriptional regulator, dissimilatory nitrate respiration regulator
D Rpal_4621 transcriptional regulator, Crp/Fnr family K21564 nnrR; CRP/FNR family transcriptional regulator, nitrogen oxide reductase regulator
D Rpal_0837 transcriptional regulator, Crp/Fnr family K21564 nnrR; CRP/FNR family transcriptional regulator, nitrogen oxide reductase regulator
D Rpal_4077 transcriptional regulator, ArsR family K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D Rpal_4074 transcriptional regulator, ArsR family K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D Rpal_4079 transcriptional regulator, MarR family K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D Rpal_1211 transcriptional regulator, ArsR family K22042 hlyU; ArsR family transcriptional regulator, virulence genes transcriptional regulator
D Rpal_5273 transcriptional regulator, XRE family with shikimate kinase activity K15546 boxR; XRE family transcriptional regulator, aerobic/anaerobic benzoate catabolism transcriptional regulator
D Rpal_2644 transcriptional regulator, XRE family K21686 prpR; XRE family transcriptional regulator, fatty acid utilization regulator
D Rpal_4879 transcriptional regulator, XRE family K07110 ramB; XRE family transcriptional regulator, fatty acid utilization regulator
D Rpal_2803 transcriptional regulator, PadR-like family K10947 K10947; PadR family transcriptional regulator
D Rpal_3284 biotin/acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D Rpal_0642 putative transcriptional regulator, Nlp K07724 ner; Ner family transcriptional regulator
D Rpal_1400 GAF modulated sigma54 specific transcriptional regulator, Fis family K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D Rpal_2402 transcriptional regulator, Fis family K12146 hyfR; hydrogenase-4 transcriptional activator
D Rpal_1624 transcriptional regulator, NifA subfamily, Fis Family K02584 nifA; Nif-specific regulatory protein
D Rpal_5113 transcriptional regulator, NifA, Fis Family K02584 nifA; Nif-specific regulatory protein
D Rpal_5199 transcriptional regulator, ModE family K02019 modE; molybdate transport system regulatory protein
D Rpal_2181 transcriptional regulator, XRE family K07726 K07726; putative transcriptional regulator
D Rpal_3572 transcriptional regulator, XRE family K07726 K07726; putative transcriptional regulator
D Rpal_0997 transcriptional regulator, XRE family K07727 K07727; putative transcriptional regulator
D Rpal_5239 putative transcriptional regulator, CopG family K07722 nikR; CopG family transcriptional regulator, nickel-responsive regulator
D Rpal_1768 delta-1-pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D Rpal_2350 FMN-binding domain protein K19339 nosR; NosR/NirI family transcriptional regulator, nitrous oxide reductase regulator
D Rpal_1857 protein of unknown function DUF156 K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D Rpal_0502 BolA family protein K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D Rpal_0293 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D Rpal_0489 transcriptional regulator, CarD family K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D Rpal_0333 heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D Rpal_0934 GreA/GreB family elongation factor K06140 rnk; regulator of nucleoside diphosphate kinase
D Rpal_2769 FMN-binding negative transcriptional regulator K07734 paiB; transcriptional regulator
D Rpal_0983 protein of unknown function DUF179 K07735 algH; putative transcriptional regulator
D Rpal_4430 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor
D Rpal_3005 ATP-cone domain protein K07738 nrdR; transcriptional repressor NrdR
D Rpal_3203 Sel1 domain protein repeat-containing protein K25885 exoR; exopolysaccharide production negative regulator
C 03021 Transcription machinery [BR:rpt03021]
D Rpal_3642 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D Rpal_3687 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D Rpal_3686 DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D Rpal_2967 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D Rpal_1481 RNA polymerase, sigma 70 subunit, RpoD family K03086 rpoD; RNA polymerase primary sigma factor
D Rpal_0706 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D Rpal_1299 putative RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D Rpal_1825 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D Rpal_2016 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D Rpal_2022 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D Rpal_4706 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D Rpal_4940 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D Rpal_5278 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D Rpal_1307 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D Rpal_0551 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D Rpal_0371 RNA polymerase, sigma 32 subunit, RpoH K03089 rpoH; RNA polymerase sigma-32 factor
D Rpal_1525 RNA polymerase, sigma 32 subunit, RpoH K03089 rpoH; RNA polymerase sigma-32 factor
D Rpal_0052 RNA polymerase, sigma 54 subunit, RpoN K03092 rpoN; RNA polymerase sigma-54 factor
D Rpal_0442 NusA antitermination factor K02600 nusA; transcription termination/antitermination protein NusA
D Rpal_3009 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB
D Rpal_3693 NusG antitermination factor K02601 nusG; transcription termination/antitermination protein NusG
D Rpal_4430 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor
D Rpal_4606 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D Rpal_0298 transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:rpt03019]
D Rpal_2728 ribonuclease, Rne/Rng family K08300 rne; ribonuclease E [EC:3.1.26.12]
D Rpal_2972 Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D Rpal_3283 beta-lactamase domain protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D Rpal_3536 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D Rpal_4192 DEAD/DEAH box helicase domain protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D Rpal_4525 DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D Rpal_5313 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D Rpal_3216 Phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Rpal_0436 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D Rpal_0298 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D Rpal_0336 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D Rpal_1331 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Rpal_2457 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Rpal_2867 RNA chaperone Hfq K03666 hfq; host factor-I protein
D Rpal_3458 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D Rpal_1380 Polynucleotide adenylyltransferase region K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D Rpal_0166 NUDIX hydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D Rpal_0169 NUDIX hydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D Rpal_0536 ATP-dependent helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:rpt03011]
D Rpal_0067 ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D Rpal_3268 ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D Rpal_3661 ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D Rpal_1777 RNA-binding S4 domain protein K02986 RP-S4; small subunit ribosomal protein S4
D Rpal_3650 ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D Rpal_3487 ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D Rpal_3671 ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D Rpal_3653 ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D Rpal_3107 ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D Rpal_3668 ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D Rpal_3643 ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D Rpal_3672 ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D Rpal_3644 ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D Rpal_3654 ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D Rpal_0437 ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D Rpal_0245 ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D Rpal_3658 ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D Rpal_3488 ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D Rpal_3663 ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D Rpal_5323 ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D Rpal_4656 ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D Rpal_4529 ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D Rpal_3691 ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D Rpal_3664 ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D Rpal_3667 ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D Rpal_3666 ribosomal protein L4/L1e K02926 RP-L4; large subunit ribosomal protein L4
D Rpal_3655 ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D Rpal_3652 ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D Rpal_3490 ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D Rpal_3689 ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D Rpal_3692 ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D Rpal_3688 ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D Rpal_3106 ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D Rpal_3657 ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D Rpal_3648 ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D Rpal_3660 ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D Rpal_3641 ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D Rpal_3651 ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D Rpal_0242 ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D Rpal_0039 ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D Rpal_0151 ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D Rpal_3662 ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D Rpal_3665 Ribosomal protein L25/L23 K02892 RP-L23; large subunit ribosomal protein L23
D Rpal_3656 ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D Rpal_0152 ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D Rpal_0494 ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D Rpal_3659 ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D Rpal_3649 ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D Rpal_0988 ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D Rpal_0527 ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D Rpal_3540 ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D Rpal_0638 ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D Rpal_0040 ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D Rpal_4677 ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D Rpal_4840 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 K02897 RP-L25; large subunit ribosomal protein L25
D Rpal_R0045 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Rpal_R0061 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Rpal_R0049 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Rpal_R0056 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Rpal_R0053 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Rpal_R0046 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:rpt03009]
D Rpal_2972 Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D Rpal_2973 GTP-binding protein Era K03595 era; GTPase
D Rpal_0157 GTP-binding protein Obg/CgtA K03979 obgE; GTPase [EC:3.6.5.-]
D Rpal_4430 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor
D Rpal_0442 NusA antitermination factor K02600 nusA; transcription termination/antitermination protein NusA
D Rpal_3009 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB
D Rpal_3693 NusG antitermination factor K02601 nusG; transcription termination/antitermination protein NusG
D Rpal_3476 dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D Rpal_0031 Fmu (Sun) domain protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D Rpal_2497 Fmu (Sun) domain protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D Rpal_1357 methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D Rpal_1342 protein of unknown function DUF558 K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D Rpal_0295 methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D Rpal_4056 S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D Rpal_0326 Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D Rpal_4001 protein of unknown function DUF548 K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242]
D Rpal_1020 hemolysin A K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D Rpal_3844 RNA methyltransferase, TrmH family, group 3 K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D Rpal_2491 ribosomal RNA methyltransferase RrmJ/FtsJ K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D Rpal_0162 protein of unknown function DUF163 K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D Rpal_1365 protein of unknown function DUF519 K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266]
D Rpal_0401 radical SAM enzyme, Cfr family K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D Rpal_1018 (Uracil-5)-methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D Rpal_0208 pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D Rpal_1356 RNA-binding S4 domain protein K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D Rpal_3624 pseudouridine synthase, RluA family K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D Rpal_0372 pseudouridine synthase, RluA family K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D Rpal_0455 ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D Rpal_0909 GCN5-related N-acetyltransferase K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267]
D Rpal_0244 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D Rpal_2950 MiaB-like tRNA modifying enzyme YliG K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D Rpal_4031 ribosomal L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D Rpal_1358 protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298]
D Rpal_2728 ribonuclease, Rne/Rng family K08300 rne; ribonuclease E [EC:3.1.26.12]
D Rpal_3523 Holliday junction resolvase YqgF K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D Rpal_4525 DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D Rpal_3505 small GTP-binding protein K03977 engA; GTPase
D Rpal_2868 GTP-binding proten HflX K03665 hflX; GTPase
D Rpal_1267 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D Rpal_2968 (p)ppGpp synthetase I, SpoT/RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D Rpal_4183 metal dependent phosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D Rpal_0439 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D Rpal_0443 protein of unknown function DUF150 K09748 rimP; ribosome maturation factor RimP
D Rpal_0161 iojap-like protein K09710 ybeB; ribosome-associated protein
D Rpal_0450 protein of unknown function UPF0054 K07042 ybeY; probable rRNA maturation factor
D Rpal_0053 sigma 54 modulation protein/ribosomal protein S30EA K05808 hpf; ribosome hibernation promoting factor
D Rpal_4838 GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase
C 03016 Transfer RNA biogenesis [BR:rpt03016]
D Rpal_4864 ribonuclease T2 K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D Rpal_3252 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Rpal_3276 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D Rpal_4861 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D Rpal_0290 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Rpal_3116 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D Rpal_3251 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D Rpal_3194 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Rpal_3453 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Rpal_4372 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Rpal_3886 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D Rpal_3185 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D Rpal_2208 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D Rpal_2853 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D Rpal_1369 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D Rpal_0038 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D Rpal_0036 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D Rpal_2738 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Rpal_0459 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D Rpal_3549 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D Rpal_0446 tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D Rpal_0627 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D Rpal_0438 tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D Rpal_5089 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Rpal_2741 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Rpal_1267 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D Rpal_2241 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D Rpal_0297 tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D Rpal_0296 glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D Rpal_1815 inositol monophosphatase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D Rpal_0637 ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D Rpal_R0059 RNA component of RNaseP K01978 rnpB; M1 RNA
D Rpal_0332 ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D Rpal_3455 ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5]
D Rpal_0047 3'-5' exonuclease K03684 rnd; ribonuclease D [EC:3.1.13.5]
D Rpal_0189 2'-5' RNA ligase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D Rpal_5166 lysyl-tRNA synthetase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D Rpal_1237 glycyl-tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D Rpal_1239 glycyl-tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D Rpal_5237 glutamyl-tRNA synthetase class Ic K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D Rpal_4777 ybaK/ebsC protein K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D Rpal_1355 CMP/dCMP deaminase zinc-binding K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D Rpal_2180 TIM-barrel protein, yjbN family K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
D Rpal_2861 TIM-barrel protein, nifR3 family K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D Rpal_0452 RNA modification enzyme, MiaB family K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D Rpal_0252 MiaB-like tRNA modifying enzyme K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
D Rpal_4361 RNA methyltransferase, TrmH family, group 1 K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-]
D Rpal_3168 gid protein K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D Rpal_0243 tRNA (guanine-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D Rpal_1383 tRNA/rRNA methyltransferase (SpoU) K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D Rpal_0208 pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D Rpal_1496 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D Rpal_4174 SirA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D Rpal_5091 iron-sulfur cluster assembly accessory protein K13628 iscA; iron-sulfur cluster assembly protein
D Rpal_2748 iron-sulfur cluster assembly accessory protein K13628 iscA; iron-sulfur cluster assembly protein
D Rpal_5109 HesB/YadR/YfhF-family protein K13628 iscA; iron-sulfur cluster assembly protein
D Rpal_1256 folate-binding protein YgfZ K06980 ygfZ; tRNA-modifying protein YgfZ
D Rpal_2875 S-adenosylmethionine/tRNA-ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D Rpal_3150 exsB protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D Rpal_1854 queuosine biosynthesis protein QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D Rpal_1382 conserved hypothetical protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D Rpal_3217 7-cyano-7-deazaguanine reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D Rpal_0043 domain of unknown function DUF1730 K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D Rpal_2649 protein of unknown function DUF208 K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6]
D Rpal_2876 queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D Rpal_1316 tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D Rpal_0456 peptidase M22 glycoprotease K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D Rpal_0256 metalloendopeptidase, glycoprotease family K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D Rpal_3536 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D Rpal_0436 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D Rpal_2204 PilT protein domain protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
C 03012 Translation factors [BR:rpt03012]
D Rpal_0440 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D Rpal_0041 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D Rpal_3467 ABC transporter related K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D Rpal_3267 translation elongation factor Ts K02357 tsf; elongation factor Ts
D Rpal_3669 translation elongation factor Tu K02358 tuf; elongation factor Tu
D Rpal_3703 translation elongation factor Tu K02358 tuf; elongation factor Tu
D Rpal_4806 small GTP-binding protein K02355 fusA; elongation factor G
D Rpal_3670 translation elongation factor G K02355 fusA; elongation factor G
D Rpal_0610 peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D Rpal_3265 ribosome recycling factor K02838 frr; ribosome recycling factor
D Rpal_0611 protein-(glutamine-N5) methyltransferase, release factor-specific K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D Rpal_4839 Aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D Rpal_4193 translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D Rpal_2792 translation elongation factor P K02356 efp; elongation factor P
D Rpal_2793 tRNA synthetase class II (D K and N) K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-]
D Rpal_2731 conserved hypothetical protein K02836 prfB; peptide chain release factor 2
D Rpal_2527 peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
D Rpal_4856 Class I peptide chain release factor K15034 yaeJ; ribosome-associated protein
C 03110 Chaperones and folding catalysts [BR:rpt03110]
D Rpal_3556 ATP-dependent Clp protease, ATP-binding subunit clpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D Rpal_4921 ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D Rpal_3308 ATP-dependent Clp protease, ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D Rpal_0308 heat shock protein HslVU, ATPase subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D Rpal_5302 heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG
D Rpal_0336 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D Rpal_1331 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Rpal_2457 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Rpal_0337 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D Rpal_5257 Hsp33 protein K04083 hslO; molecular chaperone Hsp33
D Rpal_0334 Ribulose-phosphate 3-epimerase K03687 GRPE; molecular chaperone GrpE
D Rpal_3241 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein
D Rpal_0957 heat shock protein Hsp20 K04080 ibpA; molecular chaperone IbpA
D Rpal_0491 RNA-binding S4 domain protein K04762 hslR; ribosome-associated heat shock protein Hsp15
D Rpal_1332 chaperonin Cpn10 K04078 groES; chaperonin GroES
D Rpal_2458 chaperonin Cpn10 K04078 groES; chaperonin GroES
D Rpal_2140 protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D Rpal_5052 protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D Rpal_4002 protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D Rpal_1317 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D Rpal_0914 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D Rpal_1053 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D Rpal_0304 protein-export protein SecB K03071 secB; preprotein translocase subunit SecB
D Rpal_3279 protein of unknown function DUF461 K09796 pccA; periplasmic copper chaperone A
D Rpal_3278 nuclear export factor GLE1 K09796 pccA; periplasmic copper chaperone A
D Rpal_1165 hydrogenase nickel insertion protein HypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF
D Rpal_1166 hydrogenase accessory protein HypB K04652 hypB; hydrogenase nickel incorporation protein HypB
D Rpal_3234 PpiC-type peptidyl-prolyl cis-trans isomerase K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D Rpal_0512 PpiC-type peptidyl-prolyl cis-trans isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D Rpal_3474 SurA domain K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D Rpal_0076 thioredoxin K03671 TXN; thioredoxin
D Rpal_0377 thioredoxin K03672 trxC; thioredoxin 2 [EC:1.8.1.8]
D Rpal_0268 thioredoxin K05838 ybbN; putative thioredoxin
D Rpal_0602 glutaredoxin 3 K03676 grxC; glutaredoxin 3
D Rpal_1796 glutaredoxin-like protein K07390 grxD; monothiol glutaredoxin
D Rpal_0204 periplasmic protein thiol/disulphide oxidoreductase DsbE K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
C 04131 Membrane trafficking [BR:rpt04131]
D Rpal_3466 Nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D Rpal_1010 Fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D Rpal_1014 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Rpal_2513 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Rpal_4673 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Rpal_5302 heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG
D Rpal_0027 major facilitator superfamily MFS_1 K06902 UMF1; MFS transporter, UMF1 family
C 04121 Ubiquitin system [BR:rpt04121]
C 03051 Proteasome [BR:rpt03051]
D Rpal_5302 heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:rpt03032]
D Rpal_4749 Ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D Rpal_3927 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Rpal_0352 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Rpal_3302 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D Rpal_3021 integration host factor, alpha subunit K04764 ihfA; integration host factor subunit alpha
D Rpal_0069 integration host factor, beta subunit K05788 ihfB; integration host factor subunit beta
D Rpal_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D Rpal_3048 Chromosomal replication initiator DnaA domain K02313 dnaA; chromosomal replication initiator protein
D Rpal_3374 Chromosomal replication initiator DnaA domain K02313 dnaA; chromosomal replication initiator protein
D Rpal_0650 Chromosomal replication initiator DnaA domain K02313 dnaA; chromosomal replication initiator protein
D Rpal_3494 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D Rpal_1480 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D Rpal_3154 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Rpal_3270 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Rpal_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Rpal_3469 DNA polymerase III chi subunit HolC K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D Rpal_0292 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Rpal_3115 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Rpal_1138 Exonuclease RNase T and DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Rpal_0303 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Rpal_0619 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Rpal_1226 Ribonuclease H K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D Rpal_5204 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Rpal_4035 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D Rpal_2869 DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D Rpal_0004 DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D Rpal_2978 DNA topoisomerase IV, A subunit K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D Rpal_2765 DNA topoisomerase IV, B subunit K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D Rpal_3535 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:rpt03036]
D Rpal_3927 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Rpal_0352 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Rpal_2972 Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D Rpal_1010 Fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D Rpal_3302 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D Rpal_3021 integration host factor, alpha subunit K04764 ihfA; integration host factor subunit alpha
D Rpal_0069 integration host factor, beta subunit K05788 ihfB; integration host factor subunit beta
D Rpal_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D Rpal_3048 Chromosomal replication initiator DnaA domain K02313 dnaA; chromosomal replication initiator protein
D Rpal_3374 Chromosomal replication initiator DnaA domain K02313 dnaA; chromosomal replication initiator protein
D Rpal_0650 Chromosomal replication initiator DnaA domain K02313 dnaA; chromosomal replication initiator protein
D Rpal_2944 hemimethylated DNA binding protein K11940 hspQ; heat shock protein HspQ
D Rpal_1521 Ferritin Dps family protein K04047 dps; starvation-inducible DNA-binding protein
D Rpal_3094 Ferritin Dps family protein K04047 dps; starvation-inducible DNA-binding protein
D Rpal_1468 Ferritin Dps family protein K04047 dps; starvation-inducible DNA-binding protein
D Rpal_2867 RNA chaperone Hfq K03666 hfq; host factor-I protein
D Rpal_0376 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D Rpal_4983 chromosome segregation protein SMC K03529 smc; chromosome segregation protein
D Rpal_3191 chromosome segregation and condensation protein ScpA K05896 scpA; segregation and condensation protein A
D Rpal_3190 segregation and condensation protein B K06024 scpB; segregation and condensation protein B
D Rpal_4041 cell division protein FtsA K03590 ftsA; cell division protein FtsA
D Rpal_5218 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D Rpal_4054 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D Rpal_0282 cell divisionFtsK/SpoIIIE K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D Rpal_4055 conserved hypothetical protein K03586 ftsL; cell division protein FtsL
D Rpal_4042 Polypeptide-transport-associated domain protein FtsQ-type K03589 ftsQ; cell division protein FtsQ
D Rpal_4049 cell division protein FtsW K03588 ftsW; cell division protein FtsW
D Rpal_5217 protein of unknown function DUF214 K09811 ftsX; cell division transport system permease protein
D Rpal_4040 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D Rpal_1017 protein of unknown function DUF710 K09888 zapA; cell division protein ZapA
D Rpal_0188 AFG1-family ATPase K06916 zapE; cell division protein ZapE
D Rpal_2729 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Rpal_4427 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Rpal_1684 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Rpal_2614 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Rpal_0099 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Rpal_0294 Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein
D Rpal_3563 ATPase MipZ K03496 parA; chromosome partitioning protein
D Rpal_0293 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D Rpal_2978 DNA topoisomerase IV, A subunit K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D Rpal_2765 DNA topoisomerase IV, B subunit K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D Rpal_0296 glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D Rpal_0295 methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D Rpal_3168 gid protein K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D Rpal_0177 integrase family protein K03733 xerC; integrase/recombinase XerC
D Rpal_0507 tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D Rpal_2187 putative multidrug-resistance related protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D Rpal_4058 filamentation induced by cAMP protein Fic K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D Rpal_0635 GTP-binding protein HSR1-related K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:rpt03400]
D Rpal_5247 methylated-DNA/protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D Rpal_4914 methylated-DNA/protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D Rpal_3589 Deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D Rpal_2856 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D Rpal_4978 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D Rpal_0346 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D Rpal_0597 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D Rpal_1197 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D Rpal_1261 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D Rpal_0083 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D Rpal_0344 transcriptional regulator, AraC family K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D Rpal_1922 2OG-Fe(II) oxygenase K03919 alkB; DNA oxidative demethylase [EC:1.14.11.33]
D Rpal_4358 uracil-DNA glycosylase superfamily K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
D Rpal_2002 phage SPO1 DNA polymerase-related protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D Rpal_2965 Uracil-DNA glycosylase superfamily K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D Rpal_1228 phage SPO1 DNA polymerase-related protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D Rpal_5238 HhH-GPD family protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D Rpal_1255 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D Rpal_0087 formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D Rpal_3202 exodeoxyribonuclease III Xth K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D Rpal_0284 exodeoxyribonuclease III Xth K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D Rpal_3728 exodeoxyribonuclease III Xth K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D Rpal_2787 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Rpal_4035 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D Rpal_5204 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Rpal_3156 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D Rpal_4824 excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B
D Rpal_1362 excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C
D Rpal_3142 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Rpal_4021 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Rpal_3687 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D Rpal_3686 DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D Rpal_3642 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D Rpal_2967 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D Rpal_2938 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D Rpal_0513 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D Rpal_4855 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D Rpal_1352 exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D Rpal_1023 exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D Rpal_3270 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Rpal_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Rpal_3469 DNA polymerase III chi subunit HolC K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D Rpal_0292 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Rpal_3115 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Rpal_1138 Exonuclease RNase T and DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Rpal_0303 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Rpal_0619 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Rpal_3154 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Rpal_0353 DNA mismatch endonuclease Vsr K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
D Rpal_3924 DNA mismatch endonuclease Vsr K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
D Rpal_4376 recA protein K03553 recA; recombination protein RecA
D Rpal_1290 Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D Rpal_1292 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D Rpal_1289 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D Rpal_0176 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D Rpal_3499 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D Rpal_0003 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D Rpal_2936 DEAD/DEAH box helicase domain protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D Rpal_2975 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D Rpal_0621 recombination protein RecR K06187 recR; recombination protein RecR
D Rpal_4037 DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D Rpal_0077 double-strand break repair helicase AddA K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
D Rpal_0078 double-strand break repair protein AddB K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
D Rpal_2047 protein of unknown function DUF853 NPT hydrolase putative K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
D Rpal_0391 Ku protein K10979 ku; DNA end-binding protein Ku
D Rpal_4172 Ku protein K10979 ku; DNA end-binding protein Ku
D Rpal_4171 DNA ligase D K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D Rpal_2316 DNA polymerase LigD, ligase domain protein K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D Rpal_2869 DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D Rpal_0004 DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D Rpal_3535 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D Rpal_3302 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D Rpal_3021 integration host factor, alpha subunit K04764 ihfA; integration host factor subunit alpha
D Rpal_0069 integration host factor, beta subunit K05788 ihfB; integration host factor subunit beta
D Rpal_5313 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D Rpal_3544 DNA-directed DNA polymerase K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D Rpal_3809 DNA-directed DNA polymerase K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D Rpal_3249 transcriptional repressor, LexA family K01356 lexA; repressor LexA [EC:3.4.21.88]
D Rpal_3360 putative phage repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D Rpal_3373 transcriptional repressor, LexA family K01356 lexA; repressor LexA [EC:3.4.21.88]
D Rpal_2004 conserved hypothetical protein K14160 imuA; protein ImuA
D Rpal_2005 conserved hypothetical protein K14161 imuB; protein ImuB
D Rpal_2006 DNA polymerase III, alpha subunit K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
D Rpal_0875 DEAD/H associated domain protein K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
D Rpal_2639 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D Rpal_3325 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D Rpal_2638 Ribonucleoside-diphosphate reductase K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:rpt03029]
D Rpal_0440 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D Rpal_0041 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D Rpal_3267 translation elongation factor Ts K02357 tsf; elongation factor Ts
D Rpal_3669 translation elongation factor Tu K02358 tuf; elongation factor Tu
D Rpal_3703 translation elongation factor Tu K02358 tuf; elongation factor Tu
D Rpal_4806 small GTP-binding protein K02355 fusA; elongation factor G
D Rpal_3670 translation elongation factor G K02355 fusA; elongation factor G
D Rpal_3017 Ubiquinol-cytochrome C chaperone K17662 CBP3; cytochrome b pre-mRNA-processing protein 3
D Rpal_0492 helicase domain protein K17675 SUPV3L1; ATP-dependent RNA helicase SUPV3L1/SUV3 [EC:5.6.2.6]
D Rpal_2973 GTP-binding protein Era K03595 era; GTPase
D Rpal_2738 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Rpal_0290 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Rpal_3453 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Rpal_3194 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Rpal_0827 Amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D Rpal_1980 Amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D Rpal_3517 glutamyl-tRNA(Gln) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D Rpal_3514 glutamyl-tRNA(Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D Rpal_3521 glutamyl-tRNA(Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D Rpal_3154 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Rpal_3260 outer membrane protein assembly complex, YaeT protein K07277 SAM50; outer membrane protein insertion porin family
D Rpal_0336 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D Rpal_0334 Ribulose-phosphate 3-epimerase K03687 GRPE; molecular chaperone GrpE
D Rpal_1331 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Rpal_2457 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Rpal_1332 chaperonin Cpn10 K04078 groES; chaperonin GroES
D Rpal_2458 chaperonin Cpn10 K04078 groES; chaperonin GroES
D Rpal_0337 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D Rpal_5089 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Rpal_2741 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Rpal_1796 glutaredoxin-like protein K07390 grxD; monothiol glutaredoxin
D Rpal_4843 protein of unknown function DUF185 K18164 NDUFAF7; NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 7
D Rpal_2187 putative multidrug-resistance related protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D Rpal_0901 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D Rpal_0903 cytochrome c oxidase assembly protein CtaG/Cox11 K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D Rpal_3097 cytochrome oxidase assembly K02259 COX15; heme a synthase [EC:1.17.99.9]
D Rpal_0636 60 kDa inner membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Rpal_0906 Surfeit locus 1 family protein K14998 SURF1; surfeit locus 1 family protein
D Rpal_5169 electron transport protein SCO1/SenC K07152 SCO1; protein SCO1
D Rpal_5302 heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:rpt02000]
D Rpal_4514 ABC transporter related K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D Rpal_4744 ABC transporter related K24819 ndvA; ATP-binding cassette, subfamily B, beta-glucan exporter [EC:7.5.2.3]
D Rpal_2216 ABC transporter related K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
D Rpal_0989 lipid A ABC exporter family, fused ATPase and inner membrane subunits K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D Rpal_3684 ABC transporter related K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D Rpal_1563 type I secretion system ATPase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D Rpal_1326 ABC transporter domain protein K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein
D Rpal_1935 SbmABacA family protein K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein
D Rpal_2634 ABC transporter domain protein K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein
D Rpal_2484 ABC transporter related K15738 uup; ABC transport system ATP-binding/permease protein
D Rpal_0821 sulfate ABC transporter, periplasmic sulfate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D Rpal_0820 sulfate ABC transporter, inner membrane subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D Rpal_0819 sulfate ABC transporter, inner membrane subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D Rpal_0818 sulfate ABC transporter, ATPase subunit K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D Rpal_2672 molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D Rpal_5198 molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D Rpal_2673 molybdate ABC transporter, inner membrane subunit K02018 modB; molybdate transport system permease protein
D Rpal_5197 molybdate ABC transporter, inner membrane subunit K02018 modB; molybdate transport system permease protein
D Rpal_5196 molybdate ABC transporter, ATPase subunit K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D Rpal_2671 ABC transporter related K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D Rpal_2403 ABC transporter nitrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D Rpal_2404 nitrate ABC transporter, inner membrane subunit K15577 nrtB; nitrate/nitrite transport system permease protein
D Rpal_2405 nitrate ABC transporter, ATPase subunits C and D K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D Rpal_2879 aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D Rpal_2889 extracellular solute-binding protein family 3 K15553 ssuA; sulfonate transport system substrate-binding protein
D Rpal_2884 aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D Rpal_2895 aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D Rpal_1571 putative sulfate ester transporter, periplasmic binding component K15553 ssuA; sulfonate transport system substrate-binding protein
D Rpal_2902 ABC nitrate/sulfonate/bicarbonate family transporter, periplasmic ligand binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D Rpal_0952 putative substrate-binding component of ABC transporter K15553 ssuA; sulfonate transport system substrate-binding protein
D Rpal_2686 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D Rpal_2255 NMT1/THI5 like domain protein K15553 ssuA; sulfonate transport system substrate-binding protein
D Rpal_2882 binding-protein-dependent transport systems inner membrane component K15554 ssuC; sulfonate transport system permease protein
D Rpal_2894 binding-protein-dependent transport systems inner membrane component K15554 ssuC; sulfonate transport system permease protein
D Rpal_1572 binding-protein-dependent transport systems inner membrane component K15554 ssuC; sulfonate transport system permease protein
D Rpal_2903 binding-protein-dependent transport systems inner membrane component K15554 ssuC; sulfonate transport system permease protein
D Rpal_0950 binding-protein-dependent transport systems inner membrane component K15554 ssuC; sulfonate transport system permease protein
D Rpal_1584 binding-protein-dependent transport systems inner membrane component K15554 ssuC; sulfonate transport system permease protein
D Rpal_2254 binding-protein-dependent transport systems inner membrane component K15554 ssuC; sulfonate transport system permease protein
D Rpal_2687 binding-protein-dependent transport systems inner membrane component K15554 ssuC; sulfonate transport system permease protein
D Rpal_2881 ABC transporter related K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D Rpal_2893 ABC transporter related K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D Rpal_1573 ABC transporter related K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D Rpal_1583 ABC transporter related K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D Rpal_2904 ABC transporter related K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D Rpal_0951 ABC transporter related K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D Rpal_2688 ABC transporter related K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D Rpal_2253 ABC transporter related K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D Rpal_4631 extracellular solute-binding protein family 1 K02012 afuA; iron(III) transport system substrate-binding protein
D Rpal_4632 binding-protein-dependent transport systems inner membrane component K02011 afuB; iron(III) transport system permease protein
D Rpal_2225 extracellular solute-binding protein family 1 K11073 potF; putrescine transport system substrate-binding protein
D Rpal_4637 Ornithine carbamoyltransferase K11074 potI; putrescine transport system permease protein
D Rpal_4638 binding-protein-dependent transport systems inner membrane component K11075 potH; putrescine transport system permease protein
D Rpal_4639 spermidine/putrescine ABC transporter ATPase subunit K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16]
D Rpal_5129 extracellular solute-binding protein family 1 K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D Rpal_1663 extracellular solute-binding protein family 1 K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D Rpal_1664 binding-protein-dependent transport systems inner membrane component K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D Rpal_1665 binding-protein-dependent transport systems inner membrane component K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D Rpal_5130 binding-protein-dependent transport systems inner membrane component K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D Rpal_1666 ABC transporter related K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D Rpal_5131 spermidine/putrescine ABC transporter ATPase subunit K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D Rpal_2251 Substrate-binding region of ABC-type glycine betaine transport system K05845 opuC; osmoprotectant transport system substrate-binding protein
D Rpal_2252 ABC transporter related K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D Rpal_0136 ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D Rpal_0471 NMT1/THI5 like domain protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D Rpal_1593 ABC transporter periplasmic binding protein, urea carboxylase region K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D Rpal_3865 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D Rpal_2952 NMT1/THI5 like domain protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D Rpal_2778 NMT1/THI5 like domain protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D Rpal_0135 binding-protein-dependent transport systems inner membrane component K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D Rpal_0469 binding-protein-dependent transport systems inner membrane component K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D Rpal_1592 binding-protein-dependent transport systems inner membrane component K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D Rpal_3864 binding-protein-dependent transport systems inner membrane component K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D Rpal_2777 binding-protein-dependent transport systems inner membrane component K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D Rpal_2953 binding-protein-dependent transport systems inner membrane component K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D Rpal_4641 binding-protein-dependent transport systems inner membrane component K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D Rpal_0134 ABC transporter related K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D Rpal_0470 ABC transporter related K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D Rpal_1591 ABC transporter related K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D Rpal_2776 ABC transporter related K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D Rpal_4642 ABC transporter related K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D Rpal_2954 ABC transporter related K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D Rpal_0132 ABC transporter related K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D Rpal_3961 ABC transporter related K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D Rpal_4889 putative periplasmic binding ABC transporter protein, putative sugar binding precursor K17321 glpV; glycerol transport system substrate-binding protein
D Rpal_4892 binding-protein-dependent transport systems inner membrane component K17322 glpP; glycerol transport system permease protein
D Rpal_4891 binding-protein-dependent transport systems inner membrane component K17323 glpQ; glycerol transport system permease protein
D Rpal_4894 ABC transporter related K17324 glpS; glycerol transport system ATP-binding protein
D Rpal_4893 ABC transporter related K17325 glpT; glycerol transport system ATP-binding protein
D Rpal_0060 extracellular solute-binding protein family 1 K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D Rpal_5274 extracellular solute-binding protein family 1 K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D Rpal_0059 binding-protein-dependent transport systems inner membrane component K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D Rpal_0058 binding-protein-dependent transport systems inner membrane component K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D Rpal_0057 ABC transporter related K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D Rpal_5058 basic membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins
D Rpal_5056 inner-membrane translocator K23535 nupB; general nucleoside transport system permease protein
D Rpal_5057 inner-membrane translocator K23536 nupC; general nucleoside transport system permease protein
D Rpal_5055 ABC transporter related K23537 nupA; general nucleoside transport system ATP-binding protein
D Rpal_4483 Mammalian cell entry related domain protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D Rpal_4715 Mammalian cell entry related domain protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D Rpal_4485 protein of unknown function DUF140 K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D Rpal_4717 protein of unknown function DUF140 K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D Rpal_4484 ABC transporter related K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D Rpal_4716 ABC transporter related K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D Rpal_0129 extracellular solute-binding protein family 1 K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D Rpal_3960 extracellular solute-binding protein family 1 K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D Rpal_0131 binding-protein-dependent transport systems inner membrane component K02025 ABC.MS.P; multiple sugar transport system permease protein
D Rpal_3959 binding-protein-dependent transport systems inner membrane component K02025 ABC.MS.P; multiple sugar transport system permease protein
D Rpal_0130 binding-protein-dependent transport systems inner membrane component K02026 ABC.MS.P1; multiple sugar transport system permease protein
D Rpal_3958 binding-protein-dependent transport systems inner membrane component K02026 ABC.MS.P1; multiple sugar transport system permease protein
D Rpal_5266 phosphate ABC transporter, periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D Rpal_4257 phosphate ABC transporter, periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D Rpal_5265 phosphate ABC transporter, inner membrane subunit PstC K02037 pstC; phosphate transport system permease protein
D Rpal_5264 phosphate ABC transporter, inner membrane subunit PstA K02038 pstA; phosphate transport system permease protein
D Rpal_5263 phosphate ABC transporter, ATPase subunit K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D Rpal_0767 phosphonate ABC transporter, periplasmic phosphonate binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D Rpal_0766 phosphonate ABC transporter, inner membrane subunit K02042 phnE; phosphonate transport system permease protein
D Rpal_0765 phosphonate ABC transporter, inner membrane subunit K02042 phnE; phosphonate transport system permease protein
D Rpal_0768 phosphonate ABC transporter, ATPase subunit K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D Rpal_2832 extracellular solute-binding protein family 3 K09969 aapJ; general L-amino acid transport system substrate-binding protein
D Rpal_2899 extracellular solute-binding protein family 3 K09969 aapJ; general L-amino acid transport system substrate-binding protein
D Rpal_5283 extracellular solute-binding protein family 3 K09969 aapJ; general L-amino acid transport system substrate-binding protein
D Rpal_2833 polar amino acid ABC transporter, inner membrane subunit K09970 aapQ; general L-amino acid transport system permease protein
D Rpal_2900 binding-protein-dependent transport systems inner membrane component K09970 aapQ; general L-amino acid transport system permease protein
D Rpal_2834 polar amino acid ABC transporter, inner membrane subunit K09971 aapM; general L-amino acid transport system permease protein
D Rpal_2901 polar amino acid ABC transporter, inner membrane subunit K09971 aapM; general L-amino acid transport system permease protein
D Rpal_2835 ABC transporter related K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1]
D Rpal_0110 putative ABC transporter; putative branched-chain amino acid transporter K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rpal_4244 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rpal_4245 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rpal_0486 substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rpal_2487 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rpal_1177 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rpal_0735 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rpal_4549 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rpal_4559 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rpal_4564 extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rpal_4575 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rpal_2079 branched chain amino acid transport system substrate binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rpal_3503 putative ABC transporter, substrate binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rpal_1941 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rpal_1948 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rpal_4882 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rpal_1850 putative ABC transporter, substrate binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rpal_4334 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rpal_5300 putative periplasmic substrate binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rpal_1991 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rpal_2248 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rpal_2001 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rpal_4000 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rpal_1428 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rpal_1559 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rpal_4246 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rpal_5294 putative ABC-type branched-chain amino acid transporter, periplasmic binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rpal_0583 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rpal_1598 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rpal_1842 conserved hypothetical protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rpal_3830 branched-chain amino acid ABC transporter, periplasmic binding protein, putative K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rpal_1752 putative UreA/short-chain amide transport system substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rpal_4650 putative ABC transporter (substrate-binding protein); putative branched-chain amino acid transporter K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rpal_3718 branched-chain amino acid ABC transporter, periplasmic binding protein, putative K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rpal_4242 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Rpal_1423 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Rpal_2519 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Rpal_1178 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Rpal_0734 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Rpal_1753 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Rpal_4550 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Rpal_4558 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Rpal_4565 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Rpal_4573 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Rpal_1940 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Rpal_1949 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Rpal_4885 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Rpal_4330 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Rpal_1995 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Rpal_3829 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Rpal_3717 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Rpal_1555 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Rpal_1601 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Rpal_0733 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Rpal_1754 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Rpal_1994 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Rpal_1556 inner-membrane translocator K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Rpal_1602 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D Rpal_1424 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D Rpal_1179 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D Rpal_1939 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D Rpal_1950 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D Rpal_2520 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D Rpal_4331 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D Rpal_4243 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D Rpal_4551 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D Rpal_4557 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D Rpal_4566 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D Rpal_4574 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D Rpal_4886 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D Rpal_4240 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Rpal_1425 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Rpal_2517 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Rpal_1180 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Rpal_1599 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Rpal_4552 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Rpal_4556 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Rpal_4567 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Rpal_4571 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Rpal_1951 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Rpal_4883 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Rpal_4332 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Rpal_3715 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Rpal_1557 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Rpal_3827 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Rpal_1558 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Rpal_1426 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Rpal_1755 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Rpal_1600 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Rpal_1181 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Rpal_0732 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Rpal_1952 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Rpal_1993 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Rpal_2518 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Rpal_3826 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Rpal_3714 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Rpal_4333 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Rpal_4241 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Rpal_4576 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Rpal_4553 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Rpal_4555 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Rpal_4568 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Rpal_4884 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Rpal_2682 NLPA lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein
D Rpal_2603 lipoprotein, YaeC family K02073 metQ; D-methionine transport system substrate-binding protein
D Rpal_1612 lipoprotein, YaeC family K02073 metQ; D-methionine transport system substrate-binding protein
D Rpal_1614 NLPA lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein
D Rpal_2680 binding-protein-dependent transport systems inner membrane component K02072 metI; D-methionine transport system permease protein
D Rpal_2605 binding-protein-dependent transport systems inner membrane component K02072 metI; D-methionine transport system permease protein
D Rpal_1611 binding-protein-dependent transport systems inner membrane component K02072 metI; D-methionine transport system permease protein
D Rpal_2681 ABC transporter related K02071 metN; D-methionine transport system ATP-binding protein
D Rpal_2604 ABC transporter related K02071 metN; D-methionine transport system ATP-binding protein
D Rpal_1610 ABC transporter related K02071 metN; D-methionine transport system ATP-binding protein
D Rpal_4191 urea ABC transporter, urea binding protein K11959 urtA; urea transport system substrate-binding protein
D Rpal_1443 urea ABC transporter, urea binding protein K11959 urtA; urea transport system substrate-binding protein
D Rpal_2663 putative UreA/short-chain amide transport system substrate-binding protein precursor K11959 urtA; urea transport system substrate-binding protein
D Rpal_4190 urea ABC transporter, permease protein UrtB K11960 urtB; urea transport system permease protein
D Rpal_1444 urea ABC transporter, permease protein UrtB K11960 urtB; urea transport system permease protein
D Rpal_2664 inner-membrane translocator K11960 urtB; urea transport system permease protein
D Rpal_4189 urea ABC transporter, permease protein UrtC K11961 urtC; urea transport system permease protein
D Rpal_1445 urea ABC transporter, permease protein UrtC K11961 urtC; urea transport system permease protein
D Rpal_2665 inner-membrane translocator K11961 urtC; urea transport system permease protein
D Rpal_1446 urea ABC transporter, ATP-binding protein UrtD K11962 urtD; urea transport system ATP-binding protein
D Rpal_4188 urea ABC transporter, ATP-binding protein UrtD K11962 urtD; urea transport system ATP-binding protein
D Rpal_2666 ABC transporter related K11962 urtD; urea transport system ATP-binding protein
D Rpal_4187 urea ABC transporter, ATP-binding protein UrtE K11963 urtE; urea transport system ATP-binding protein
D Rpal_1447 urea ABC transporter, ATP-binding protein UrtE K11963 urtE; urea transport system ATP-binding protein
D Rpal_2667 ABC transporter related K11963 urtE; urea transport system ATP-binding protein
D Rpal_5167 extracellular solute-binding protein family 3 K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D Rpal_1411 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Rpal_1660 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Rpal_2571 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Rpal_0833 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Rpal_0106 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Rpal_2941 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Rpal_2913 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Rpal_2918 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Rpal_1632 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Rpal_0832 4-phytase K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Rpal_1409 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Rpal_1633 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Rpal_2572 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Rpal_0831 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Rpal_2917 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Rpal_0105 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Rpal_1659 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Rpal_1408 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Rpal_1658 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Rpal_1634 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Rpal_2573 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Rpal_0830 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Rpal_2916 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Rpal_0104 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Rpal_1630 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Rpal_0826 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Rpal_0103 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Rpal_1407 ABC transporter related K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Rpal_1656 ABC transporter related K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Rpal_2574 ABC transporter related K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Rpal_2915 ABC transporter related K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Rpal_1631 oligopeptide/dipeptide ABC transporter, ATPase subunit K02032 ddpF; peptide/nickel transport system ATP-binding protein
D Rpal_0102 oligopeptide/dipeptide ABC transporter, ATPase subunit K02032 ddpF; peptide/nickel transport system ATP-binding protein
D Rpal_0829 oligopeptide/dipeptide ABC transporter, ATPase subunit K02032 ddpF; peptide/nickel transport system ATP-binding protein
D Rpal_4213 extracellular solute-binding protein family 5 K13893 yejA; microcin C transport system substrate-binding protein
D Rpal_4214 extracellular solute-binding protein family 5 K13893 yejA; microcin C transport system substrate-binding protein
D Rpal_4212 binding-protein-dependent transport systems inner membrane component K13894 yejB; microcin C transport system permease protein
D Rpal_4211 binding-protein-dependent transport systems inner membrane component K13895 yejE; microcin C transport system permease protein
D Rpal_4210 ABC transporter related K13896 yejF; microcin C transport system ATP-binding protein
D Rpal_2411 periplasmic binding protein K25132 hmuT; heme transport system substrate-binding protein
D Rpal_2410 transport system permease protein K25133 hmuU; heme transport system permease protein
D Rpal_2409 ABC transporter related K10834 hmuV; heme transport system ATP-binding protein [EC:7.6.2.5]
D Rpal_2627 periplasmic binding protein K25282 yclQ; iron-siderophore transport system substrate-binding protein
D Rpal_2625 transport system permease protein K25283 yclO; iron-siderophore transport system permease protein
D Rpal_2626 transport system permease protein K25284 yclN; iron-siderophore transport system permease protein
D Rpal_2624 ABC transporter related K25285 yclP; iron-siderophore transport system ATP-binding protein [EC:7.2.2.-]
D Rpal_2371 periplasmic binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D Rpal_2551 periplasmic binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D Rpal_0791 periplasmic binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D Rpal_0794 transport system permease protein K02015 ABC.FEV.P; iron complex transport system permease protein
D Rpal_2552 transport system permease protein K02015 ABC.FEV.P; iron complex transport system permease protein
D Rpal_0793 ABC transporter related K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D Rpal_2553 ABC transporter related K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D Rpal_2725 BioY protein K03523 bioY; biotin transport system substrate-specific component
D Rpal_0928 periplasmic solute binding protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein
D Rpal_0927 ABC-3 protein K02075 ABC.ZM.P; zinc/manganese transport system permease protein
D Rpal_0926 ABC transporter related K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein
D Rpal_4589 ABC-2 type transporter K09690 wzm; homopolymeric O-antigen transport system permease protein
D Rpal_4590 ABC transporter related K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D Rpal_3471 permease YjgP/YjgQ family protein K07091 lptF; lipopolysaccharide export system permease protein
D Rpal_3472 permease YjgP/YjgQ family protein K11720 lptG; lipopolysaccharide export system permease protein
D Rpal_0050 ABC transporter related K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D Rpal_2354 nitrous oxide metabolic protein K19341 nosY; Cu-processing system permease protein
D Rpal_2353 ABC transporter related K19340 nosF; Cu-processing system ATP-binding protein
D Rpal_3275 lipoprotein releasing system, transmembrane protein, LolC/E family K09808 lolC_E; lipoprotein-releasing system permease protein
D Rpal_1840 protein of unknown function DUF214 K09808 lolC_E; lipoprotein-releasing system permease protein
D Rpal_1841 ABC transporter related K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D Rpal_3274 ABC transporter related K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D Rpal_0203 heme exporter protein CcmD K02196 ccmD; heme exporter protein D
D Rpal_0202 heme exporter protein CcmC K02195 ccmC; heme exporter protein C
D Rpal_0201 heme exporter protein CcmB K02194 ccmB; heme exporter protein B
D Rpal_0200 heme exporter protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D Rpal_5217 protein of unknown function DUF214 K09811 ftsX; cell division transport system permease protein
D Rpal_5218 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D Rpal_0577 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D Rpal_4025 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D Rpal_0750 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D Rpal_4310 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D Rpal_0576 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Rpal_4024 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Rpal_4311 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Rpal_5297 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D Rpal_0192 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D Rpal_0191 ABC transporter related K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D Rpal_5296 ABC transporter related K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D Rpal_2743 FeS assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D Rpal_1019 MATE efflux family protein K26939 norM; MATE family, multidrug efflux pump
D Rpal_0868 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump
D Rpal_1888 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump
D Rpal_5248 multi antimicrobial extrusion protein MatE K26937 dinF; MATE family, multidrug efflux pump
D Rpal_2154 major facilitator superfamily MFS_1 K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter
D Rpal_5295 major facilitator superfamily MFS_1 K08194 dgoT; MFS transporter, ACS family, D-galactonate transporter
D Rpal_4487 major facilitator superfamily MFS_1 K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter
D Rpal_1720 PUCC protein K08226 pucC; MFS transporter, BCD family, chlorophyll transporter
D Rpal_1735 PUCC protein K08226 pucC; MFS transporter, BCD family, chlorophyll transporter
D Rpal_1680 PUCC protein K08226 pucC; MFS transporter, BCD family, chlorophyll transporter
D Rpal_0623 major facilitator superfamily MFS_1 K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D Rpal_3504 major facilitator superfamily MFS_1 K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein
D Rpal_4034 drug resistance transporter, Bcr/CflA subfamily K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D Rpal_3885 major facilitator superfamily MFS_1 K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D Rpal_0515 drug resistance transporter, EmrB/QacA subfamily K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D Rpal_4220 drug resistance transporter, EmrB/QacA subfamily K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D Rpal_4060 drug resistance transporter, EmrB/QacA subfamily K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D Rpal_4797 major facilitator superfamily MFS_1 K08223 fsr; MFS transporter, FSR family, fosmidomycin resistance protein
D Rpal_0027 major facilitator superfamily MFS_1 K06902 UMF1; MFS transporter, UMF1 family
D Rpal_0609 PTSINtr with GAF domain, PtsP K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D Rpal_0357 Phosphotransferase system, phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D Rpal_0358 PTS system fructose subfamily IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D Rpal_3408 putative PTS IIA-like nitrogen-regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D Rpal_0054 PTS IIA-like nitrogen-regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D Rpal_4712 cyclic nucleotide-binding protein K10716 kch; voltage-gated potassium channel
D Rpal_3161 Ion transport 2 domain protein K10716 kch; voltage-gated potassium channel
D Rpal_0276 ammonium transporter K03320 amt; ammonium transporter, Amt family
D Rpal_0278 ammonium transporter K03320 amt; ammonium transporter, Amt family
D Rpal_0888 Glutathione S-transferase domain K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D Rpal_0024 Glutathione S-transferase domain K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D Rpal_0044 Glutathione S-transferase domain K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D Rpal_4403 Glutathione S-transferase domain K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D Rpal_2508 Glutathione S-transferase domain K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D Rpal_4794 Glutathione S-transferase domain K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D Rpal_4810 Glutathione S-transferase domain K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D Rpal_3568 Glutathione S-transferase domain K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D Rpal_4913 Glutathione S-transferase domain K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D Rpal_5299 membrane-associated protein in eicosanoid and glutathione metabolism (MAPEG) K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D Rpal_3614 formate/nitrite transporter K21993 fdhC; formate transporter
D Rpal_2962 large conductance mechanosensitive channel protein K03282 mscL; large conductance mechanosensitive channel
D Rpal_4873 MscS Mechanosensitive ion channel K16052 ynaI; MscS family membrane protein
D Rpal_3573 magnesium transporter K06213 mgtE; magnesium transporter
D Rpal_2220 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA
D Rpal_2221 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
D Rpal_3243 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
D Rpal_0991 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
D Rpal_2418 tonB-system energizer ExbB K03561 exbB; biopolymer transport protein ExbB
D Rpal_3697 tonB-system energizer ExbB K03561 exbB; biopolymer transport protein ExbB
D Rpal_3967 tonB-system energizer ExbB K03561 exbB; biopolymer transport protein ExbB
D Rpal_1432 tonB-system energizer ExbB K03561 exbB; biopolymer transport protein ExbB
D Rpal_1433 TonB system transport protein ExbD K03559 exbD; biopolymer transport protein ExbD
D Rpal_3696 Biopolymer transport protein ExbD/TolR K03559 exbD; biopolymer transport protein ExbD
D Rpal_2419 TonB system transport protein ExbD K03559 exbD; biopolymer transport protein ExbD
D Rpal_3966 TonB system transport protein ExbD K03559 exbD; biopolymer transport protein ExbD
D Rpal_1308 protein TolQ K03562 tolQ; biopolymer transport protein TolQ
D Rpal_1309 Biopolymer transport protein ExbD/TolR K03560 tolR; biopolymer transport protein TolR
D Rpal_4931 Mg2 transporter protein CorA family protein K03284 corA; magnesium transporter
D Rpal_4248 Mg2 transporter protein CorA family protein K16074 zntB; zinc transporter
D Rpal_1527 Camphor resistance CrcB protein K06199 crcB; fluoride exporter
D Rpal_1528 Camphor resistance CrcB protein K06199 crcB; fluoride exporter
D Rpal_1891 CrcB protein K06199 crcB; fluoride exporter
D Rpal_3456 protein of unknown function UPF0187 K08994 yneE; ion channel-forming bestrophin family protein
D Rpal_3101 protein of unknown function DUF1211 K24915 TMEM175; TMEM175 potassium channel family protein
D Rpal_3152 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family
D Rpal_0503 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family
D Rpal_0925 porin K16079 omp31; outer membrane immunogenic protein
D Rpal_0873 porin K16079 omp31; outer membrane immunogenic protein
D Rpal_1363 putative outer-membrane immunogenic protein precursor K16079 omp31; outer membrane immunogenic protein
D Rpal_3155 OmpA domain protein transmembrane region-containing protein K16079 omp31; outer membrane immunogenic protein
D Rpal_3853 porin K16079 omp31; outer membrane immunogenic protein
D Rpal_4795 outer membrane insertion C-terminal signal K16079 omp31; outer membrane immunogenic protein
D Rpal_0473 Carbohydrate-selective porin OprB K16080 mnoP; high affinity Mn2+ porin
D Rpal_4249 Carbohydrate-selective porin OprB K16080 mnoP; high affinity Mn2+ porin
D Rpal_5270 OmpA/MotB domain protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D Rpal_0211 OmpA/MotB domain protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D Rpal_3969 TonB-dependent siderophore receptor K16090 fiu; catecholate siderophore receptor
D Rpal_5290 TonB-dependent receptor plug K16092 btuB; vitamin B12 transporter
D Rpal_2550 TonB-dependent receptor plug K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D Rpal_2622 TonB-dependent receptor plug K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D Rpal_3699 TonB-dependent heme/hemoglobin receptor family protein K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D Rpal_2415 TonB-dependent heme/hemoglobin receptor family protein K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D Rpal_2237 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D Rpal_0411 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D Rpal_4365 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D Rpal_2082 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D Rpal_2620 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D Rpal_3084 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D Rpal_3895 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D Rpal_4869 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D Rpal_2019 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D Rpal_2027 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D Rpal_2049 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D Rpal_4917 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D Rpal_2636 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D Rpal_2298 outer membrane efflux protein K15725 czcC; outer membrane protein, heavy metal efflux system
D Rpal_2344 outer membrane efflux protein K15725 czcC; outer membrane protein, heavy metal efflux system
D Rpal_1047 outer membrane efflux protein K15725 czcC; outer membrane protein, heavy metal efflux system
D Rpal_2013 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein
D Rpal_2851 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein
D Rpal_2841 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system
D Rpal_2616 RND efflux system, outer membrane lipoprotein, NodT family K18904 nodT; outer membrane protein, multidrug efflux system
D Rpal_5320 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D Rpal_3782 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D Rpal_3260 outer membrane protein assembly complex, YaeT protein K07277 SAM50; outer membrane protein insertion porin family
D Rpal_4038 outer membrane assembly lipoprotein YfiO K05807 bamD; outer membrane protein assembly factor BamD
D Rpal_0049 OstA family protein K09774 lptA; lipopolysaccharide export system protein LptA
D Rpal_0048 protein of unknown function DUF1239 K11719 lptC; lipopolysaccharide export system protein LptC
D Rpal_3473 Organic solvent tolerance protein K04744 lptD; LPS-assembly protein
D Rpal_0291 conserved hypothetical protein K03643 lptE; LPS-assembly lipoprotein
D Rpal_0449 CBS domain containing protein K06189 corC; hemolysin (HlyC) family protein
D Rpal_0545 LrgA family protein K06518 cidA; holin-like protein
D Rpal_0219 cation diffusion facilitator family transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein
D Rpal_2286 cation diffusion facilitator family transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein
D Rpal_2346 heavy metal efflux pump, CzcA family K15726 czcA; heavy metal efflux system protein
D Rpal_2011 heavy metal efflux pump, CzcA family K15726 czcA; heavy metal efflux system protein
D Rpal_2300 heavy metal efflux pump, CzcA family K15726 czcA; heavy metal efflux system protein
D Rpal_4972 heavy metal efflux pump, CzcA family K15726 czcA; heavy metal efflux system protein
D Rpal_1603 heavy metal efflux pump, CzcA family K07787 cusA; copper/silver efflux system protein
D Rpal_1045 heavy metal efflux pump, CzcA family K07787 cusA; copper/silver efflux system protein
D Rpal_3428 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family K18902 bpeF; multidrug efflux pump
D Rpal_4296 acriflavin resistance protein K18307 mexI; multidrug efflux pump
D Rpal_4901 acriflavin resistance protein K18303 mexK; multidrug efflux pump
D Rpal_4426 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family K18138 acrB; multidrug efflux pump
D Rpal_1685 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family K18138 acrB; multidrug efflux pump
D Rpal_0100 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family K18138 acrB; multidrug efflux pump
D Rpal_2172 acriflavin resistance protein K21134 triC; multidrug efflux pump
D Rpal_2843 acriflavin resistance protein K07788 mdtB; multidrug efflux pump
D Rpal_2844 acriflavin resistance protein K07789 mdtC; multidrug efflux pump
D Rpal_1973 small multidrug resistance protein K03297 emrE; small multidrug resistance pump
D Rpal_0796 small multidrug resistance protein K11741 sugE; quaternary ammonium compound-resistance protein SugE
D Rpal_2526 small multidrug resistance protein K11741 sugE; quaternary ammonium compound-resistance protein SugE
D Rpal_0605 protein of unknown function DUF6 transmembrane K08978 TC.BAT1; bacterial/archaeal transporter family protein
D Rpal_2245 protein of unknown function DUF6 transmembrane K15268 eamA; O-acetylserine/cysteine efflux transporter
D Rpal_4363 protein of unknown function UPF0060 K09771 TC.SMR3; small multidrug resistance family-3 protein
D Rpal_1327 L-lactate transport K03303 lutP; lactate permease
D Rpal_0554 sodium:dicarboxylate symporter K11103 dctA; aerobic C4-dicarboxylate transport protein
D Rpal_2726 sodium:dicarboxylate symporter K11103 dctA; aerobic C4-dicarboxylate transport protein
D Rpal_2504 sodium/glutamate symporter K03312 gltS; glutamate:Na+ symporter, ESS family
D Rpal_0521 Na+/H+ antiporter K24163 nhaK; monovalent cation/hydrogen antiporter
D Rpal_0393 sodium/hydrogen exchanger K11105 cvrA; potassium/hydrogen antiporter
D Rpal_3823 sodium/hydrogen exchanger K03316 nhaP; Na+:H+ antiporter
D Rpal_4369 sodium/hydrogen exchanger K03455 KEA1_2_3; K+:H+ antiporter
D Rpal_4368 potassium efflux system protein K26735 KEA4_5_6; K+:H+ antiporter
D Rpal_3137 benzoate transporter K05782 benE; benzoate membrane transport protein
D Rpal_1650 Chloride channel core K03281 clcA; chloride channel protein, CIC family
D Rpal_4474 Chloride channel core K03281 clcA; chloride channel protein, CIC family
D Rpal_0588 chromate transporter, chromate ion transporter (CHR) family K07240 chrA; chromate transporter
D Rpal_4011 Chromate transporter K07240 chrA; chromate transporter
D Rpal_4012 Chromate transporter K07240 chrA; chromate transporter
D Rpal_0795 high-affinity nickel-transporter K07241 hoxN; nickel/cobalt transporter (NiCoT) family protein
D Rpal_4804 sulphate transporter K03321 TC.SULP; sulfate permease, SulP family
D Rpal_2981 Mn2+/Fe2+ transporter, NRAMP family K03322 mntH; manganese transport protein
D Rpal_2260 TRAP dicarboxylate transporter, DctP subunit K11688 dctP; C4-dicarboxylate-binding protein DctP
D Rpal_2261 Tripartite ATP-independent periplasmic transporter DctQ component K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit
D Rpal_2262 TRAP dicarboxylate transporter, DctM subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D Rpal_3121 TRAP dicarboxylate transporter, DctP subunit K21395 yiaO; TRAP-type transport system periplasmic protein
D Rpal_3877 Arsenical pump membrane protein K03893 arsB; arsenical pump membrane protein
D Rpal_4071 arsenical-resistance protein K03325 ACR3; arsenite transporter
D Rpal_3128 NADH dehydrogenase (quinone) K05559 phaA; multicomponent K+:H+ antiporter subunit A
D Rpal_3129 NADH-ubiquinone oxidoreductase chain 4L K05560 phaC; multicomponent K+:H+ antiporter subunit C
D Rpal_3130 NADH/Ubiquinone/plastoquinone (complex I) K05561 phaD; multicomponent K+:H+ antiporter subunit D
D Rpal_3131 cation antiporter K05562 phaE; multicomponent K+:H+ antiporter subunit E
D Rpal_3132 multiple resistance and pH regulation protein F K05563 phaF; multicomponent K+:H+ antiporter subunit F
D Rpal_3133 monovalent cation/proton antiporter, MnhG/PhaG subunit K05564 phaG; multicomponent K+:H+ antiporter subunit G
D Rpal_0460 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D Rpal_4500 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D Rpal_2945 Auxin Efflux Carrier K13936 mdcF; malonate transporter and related proteins
D Rpal_2222 K potassium transporter K03549 kup; KUP system potassium uptake protein
D Rpal_3417 K potassium transporter K03549 kup; KUP system potassium uptake protein
D Rpal_3436 K potassium transporter K03549 kup; KUP system potassium uptake protein
D Rpal_1318 AzlC family protein K26605 azlC; branched chain amino acid efflux pump
D Rpal_1319 branched-chain amino acid transport K26606 azlD; branched chain amino acid efflux pump
D Rpal_4009 protein of unknown function DUF112 transmembrane K07793 tctA; putative tricarboxylic transport membrane protein
D Rpal_2563 protein of unknown function DUF112 transmembrane K07793 tctA; putative tricarboxylic transport membrane protein
D Rpal_4010 protein of unknown function DUF1468 K07794 tctB; putative tricarboxylic transport membrane protein
D Rpal_2564 protein of unknown function DUF1468 K07794 tctB; putative tricarboxylic transport membrane protein
D Rpal_5175 conserved hypothetical protein K07795 tctC; putative tricarboxylic transport membrane protein
D Rpal_4008 conserved hypothetical protein K07795 tctC; putative tricarboxylic transport membrane protein
D Rpal_3122 protein of unknown function DUF125 transmembrane K22736 VIT; vacuolar iron transporter family protein
D Rpal_4784 Rubrerythrin K22737 mbfA; erythrin-vacuolar iron transport family protein
D Rpal_4049 cell division protein FtsW K03588 ftsW; cell division protein FtsW
D Rpal_1834 iron permease FTR1 K07243 FTR; high-affinity iron transporter
D Rpal_0942 high-affinity nickel-transporter K08970 rcnA; nickel/cobalt transporter (NicO) family protein
D Rpal_1434 TonB family protein K03832 tonB; periplasmic protein TonB
D Rpal_2420 TonB family protein K03832 tonB; periplasmic protein TonB
D Rpal_3695 TonB family protein K03832 tonB; periplasmic protein TonB
D Rpal_3965 TonB family protein K03832 tonB; periplasmic protein TonB
D Rpal_1314 peptidoglycan-associated lipoprotein K03640 pal; peptidoglycan-associated lipoprotein
D Rpal_1311 Tol-Pal system beta propeller repeat protein TolB K03641 tolB; TolB protein
D Rpal_3012 V-type H(+)-translocating pyrophosphatase K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1]
D Rpal_4337 cytochrome c biogenesis protein transmembrane region K06196 ccdA; cytochrome c-type biogenesis protein
D Rpal_4965 cytochrome c biogenesis protein transmembrane region K06196 ccdA; cytochrome c-type biogenesis protein
D Rpal_4219 secretion protein HlyD family protein K03543 emrA; membrane fusion protein, multidrug efflux system
D Rpal_4061 secretion protein HlyD family protein K03543 emrA; membrane fusion protein, multidrug efflux system
D Rpal_0516 secretion protein HlyD family protein K03543 emrA; membrane fusion protein, multidrug efflux system
D Rpal_1562 type I secretion membrane fusion protein, HlyD family K12537 hasE; membrane fusion protein, type I secretion system
D Rpal_2010 efflux transporter, RND family, MFP subunit K15727 czcB; membrane fusion protein, heavy metal efflux system
D Rpal_2299 efflux transporter, RND family, MFP subunit K15727 czcB; membrane fusion protein, heavy metal efflux system
D Rpal_2345 efflux transporter, RND family, MFP subunit K15727 czcB; membrane fusion protein, heavy metal efflux system
D Rpal_1604 efflux transporter, RND family, MFP subunit K07798 cusB; membrane fusion protein, copper/silver efflux system
D Rpal_1046 efflux transporter, RND family, MFP subunit K07798 cusB; membrane fusion protein, copper/silver efflux system
D Rpal_3429 efflux transporter, RND family, MFP subunit K18901 bpeE; membrane fusion protein, multidrug efflux system
D Rpal_4297 efflux transporter, RND family, MFP subunit K18306 mexH; membrane fusion protein, multidrug efflux system
D Rpal_4427 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Rpal_1684 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Rpal_2614 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Rpal_0099 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Rpal_2170 efflux transporter, RND family, MFP subunit K21136 triA; membrane fusion protein, multidrug efflux system
D Rpal_2171 efflux transporter, RND family, MFP subunit K21137 triB; membrane fusion protein, multidrug efflux system
D Rpal_1530 efflux transporter, RND family, MFP subunit K07799 mdtA; membrane fusion protein, multidrug efflux system
D Rpal_2842 efflux transporter, RND family, MFP subunit K07799 mdtA; membrane fusion protein, multidrug efflux system
D Rpal_3971 efflux transporter, RND family, MFP subunit K07799 mdtA; membrane fusion protein, multidrug efflux system
D Rpal_3777 capsular exopolysaccharide family K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D Rpal_5065 lipopolysaccharide biosynthesis protein K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D Rpal_3091 lipopolysaccharide biosynthesis protein K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D Rpal_5117 FeoA family protein K04758 feoA; ferrous iron transport protein A
D Rpal_5116 ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D Rpal_1722 TspO and MBR like protein K05770 TSPO; translocator protein
D Rpal_2132 cytochrome c-type biogenesis protein CcmF K02198 ccmF; cytochrome c-type biogenesis protein CcmF
D Rpal_2236 MgtC/SapB transporter K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
D Rpal_2287 MgtC/SapB transporter K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
D Rpal_0931 MgtC/SapB transporter K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
D Rpal_3277 copper resistance protein CopC K14166 ycnJ; copper transport protein
C 02044 Secretion system [BR:rpt02044]
D Rpal_2013 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein
D Rpal_2851 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein
D Rpal_1563 type I secretion system ATPase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D Rpal_1562 type I secretion membrane fusion protein, HlyD family K12537 hasE; membrane fusion protein, type I secretion system
D Rpal_4198 peptidase A24A prepilin type IV K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D Rpal_4199 Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D Rpal_4615 Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D Rpal_4200 type II and III secretion system protein K02280 cpaC; pilus assembly protein CpaC
D Rpal_4201 pilus (Caulobacter type) biogenesis lipoprotein CpaD K02281 cpaD; pilus assembly protein CpaD
D Rpal_4202 putative pilus assembly protein CpaE K02282 cpaE; pilus assembly protein CpaE
D Rpal_4203 type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D Rpal_4204 type II secretion system protein K12510 tadB; tight adherence protein B
D Rpal_4205 type II secretion system protein K12511 tadC; tight adherence protein C
D Rpal_4197 Flp/Fap pilin component K02651 flp; pilus assembly protein Flp/PilA
D Rpal_0974 Flp/Fap pilin component K02651 flp; pilus assembly protein Flp/PilA
D Rpal_2088 Flp/Fap pilin component K02651 flp; pilus assembly protein Flp/PilA
D Rpal_0419 protein of unknown function YGGT K02221 yggT; YggT family protein
D Rpal_0205 conserved hypothetical protein K02237 comEA; competence protein ComEA
D Rpal_3250 ComEC/Rec2-related protein K02238 comEC; competence protein ComEC
D Rpal_1828 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D Rpal_4406 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D Rpal_3620 type III secretion protein K04061 flhB2; flagellar biosynthesis protein
D Rpal_1457 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D Rpal_1459 flagellar assembly protein H K02411 fliH; flagellar assembly protein FliH
D Rpal_1823 flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D Rpal_1460 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D Rpal_3578 surface presentation of antigens (SPOA) protein K02417 fliN; flagellar motor switch protein FliN
D Rpal_4412 putative exported protein of unknown function K02418 fliO; flagellar protein FliO/FliZ
D Rpal_4413 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D Rpal_4408 export protein FliQ family 3 K02420 fliQ; flagellar biosynthesis protein FliQ
D Rpal_4407 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D Rpal_1274 conserved hypothetical protein K04335 csgB; minor curlin subunit
D Rpal_1275 conserved hypothetical protein K04338 csgF; curli production assembly/transport component CsgF
D Rpal_3753 hypothetical protein K04338 csgF; curli production assembly/transport component CsgF
D Rpal_1276 curli production assembly/transport component CsgG K06214 csgG; curli production assembly/transport component CsgG
D Rpal_3754 Curli production assembly/transport component CsgG K06214 csgG; curli production assembly/transport component CsgG
D Rpal_0511 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Rpal_0304 protein-export protein SecB K03071 secB; preprotein translocase subunit SecB
D Rpal_3172 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D Rpal_3694 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D Rpal_3171 protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D Rpal_3232 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D Rpal_3647 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D Rpal_0246 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D Rpal_0207 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D Rpal_3173 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D Rpal_0636 60 kDa inner membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Rpal_3189 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA
D Rpal_3188 putative sec-independent protein translocase protein K03117 tatB; sec-independent protein translocase protein TatB
D Rpal_3187 Sec-independent protein translocase, TatC subunit K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:rpt02042]
D Rpal_3152 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family
D Rpal_0503 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family
D Rpal_1773 Hly-III family protein K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:rpt02022]
D Rpal_5267 PAS/PAC sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D Rpal_5261 two component transcriptional regulator, winged helix family K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D Rpal_4851 integral membrane sensor signal transduction histidine kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D Rpal_4852 two component transcriptional regulator, winged helix family K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D Rpal_3410 osmosensitive K+ channel signal transduction histidine kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D Rpal_3409 two component transcriptional regulator, winged helix family K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D Rpal_0360 integral membrane sensor signal transduction histidine kinase K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3]
D Rpal_0361 two component transcriptional regulator, winged helix family K14981 chvI; two-component system, OmpR family, response regulator ChvI
D Rpal_2611 integral membrane sensor signal transduction histidine kinase K18143 adeS; two-component system, OmpR family, sensor histidine kinase AdeS [EC:2.7.13.3]
D Rpal_2612 two component transcriptional regulator, winged helix family K18144 adeR; two-component system, OmpR family, response regulator AdeR
D Rpal_2126 two component transcriptional regulator, winged helix family K02483 K02483; two-component system, OmpR family, response regulator
D Rpal_2141 two component transcriptional regulator, winged helix family K02483 K02483; two-component system, OmpR family, response regulator
D Rpal_4089 two component transcriptional regulator, winged helix family K02483 K02483; two-component system, OmpR family, response regulator
D Rpal_5277 two component transcriptional regulator, winged helix family K02483 K02483; two-component system, OmpR family, response regulator
D Rpal_5304 two component transcriptional regulator, winged helix family K02483 K02483; two-component system, OmpR family, response regulator
D Rpal_2862 signal transduction histidine kinase, nitrogen specific, NtrB K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D Rpal_2863 nitrogen metabolism transcriptional regulator, NtrC, Fis Family K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D Rpal_2864 multi-sensor signal transduction histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D Rpal_2865 two component, sigma54 specific, transcriptional regulator, Fis family K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D Rpal_1172 PAS/PAC sensor signal transduction histidine kinase K19661 hupT; two-component system, NtrC family, sensor histidine kinase HupT/HoxJ [EC:2.7.13.3]
D Rpal_1171 two component, sigma54 specific, transcriptional regulator, Fis family K19641 hupR; two-component system, NtrC family, response regulator HupR/HoxA
D Rpal_2427 integral membrane sensor hybrid histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D Rpal_0145 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Rpal_1817 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Rpal_1872 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Rpal_1366 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Rpal_0146 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Rpal_1819 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Rpal_1870 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Rpal_0140 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Rpal_1820 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Rpal_3739 MCP methyltransferase, CheR-type K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D Rpal_3424 GAF sensor signal transduction histidine kinase K11354 cph1; two-component system, chemotaxis family, sensor kinase Cph1 [EC:2.7.13.3]
D Rpal_3425 GAF sensor signal transduction histidine kinase K11354 cph1; two-component system, chemotaxis family, sensor kinase Cph1 [EC:2.7.13.3]
D Rpal_1726 putative PAS/PAC sensor protein K11354 cph1; two-component system, chemotaxis family, sensor kinase Cph1 [EC:2.7.13.3]
D Rpal_0125 GAF sensor signal transduction histidine kinase K11354 cph1; two-component system, chemotaxis family, sensor kinase Cph1 [EC:2.7.13.3]
D Rpal_2148 PAS/PAC sensor signal transduction histidine kinase K07716 pleC; two-component system, cell cycle sensor histidine kinase PleC [EC:2.7.13.3]
D Rpal_2185 integral membrane sensor signal transduction histidine kinase K07716 pleC; two-component system, cell cycle sensor histidine kinase PleC [EC:2.7.13.3]
D Rpal_2063 multi-sensor signal transduction histidine kinase K11357 divJ; two-component system, cell cycle sensor histidine kinase DivJ [EC:2.7.13.3]
D Rpal_3541 response regulator receiver modulated diguanylate cyclase K02488 pleD; two-component system, cell cycle response regulator [EC:2.7.7.65]
D Rpal_3542 response regulator receiver protein K11443 divK; two-component system, cell cycle response regulator DivK
D Rpal_4405 multi-sensor hybrid histidine kinase K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
D Rpal_1822 two component transcriptional regulator, winged helix family K13584 ctrA; two-component system, cell cycle response regulator CtrA
D Rpal_0976 response regulator receiver protein K13589 cpdR; two-component system, cell cycle response regulator CpdR
D Rpal_4726 PAS/PAC sensor signal transduction histidine kinase K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3]
D Rpal_2535 multi-sensor signal transduction histidine kinase K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3]
D Rpal_4727 two component transcriptional regulator, LuxR family K14987 fixJ; two-component system, LuxR family, response regulator FixJ
D Rpal_1461 two component, sigma54 specific, transcriptional regulator, Fis family K10943 flrC; two-component system, response regulator FlrC
D Rpal_0148 response regulator receiver modulated metal dependent phosphohydrolase K13815 rpfG; two-component system, response regulator RpfG
D Rpal_0575 integral membrane sensor signal transduction histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D Rpal_0574 two component transcriptional regulator, Fis family K15012 regA; two-component system, response regulator RegA
D Rpal_4228 putative nitrate transport protein K22067 nasS; two-component system, oxyanion-binding sensor
D Rpal_4227 response regulator receiver and ANTAR domain protein K07183 nasT; two-component system, response regulator / RNA-binding antiterminator
C 02035 Bacterial motility proteins [BR:rpt02035]
D Rpal_0145 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Rpal_1817 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Rpal_1872 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Rpal_0143 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D Rpal_0144 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D Rpal_1818 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D Rpal_1873 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D Rpal_0141 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D Rpal_1874 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D Rpal_1821 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D Rpal_0140 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Rpal_1820 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Rpal_3739 MCP methyltransferase, CheR-type K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D Rpal_1366 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Rpal_0146 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Rpal_1819 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Rpal_1870 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Rpal_1335 putative chemotaxis phosphatase, CheZ K03414 cheZ; chemotaxis protein CheZ
D Rpal_0435 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor K03406 mcp; methyl-accepting chemotaxis protein
D Rpal_0142 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Rpal_1286 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Rpal_2054 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Rpal_4064 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Rpal_4787 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Rpal_4788 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Rpal_4783 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Rpal_4941 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Rpal_5119 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Rpal_5120 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Rpal_5172 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Rpal_1871 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor K03776 aer; aerotaxis receptor
D Rpal_1459 flagellar assembly protein H K02411 fliH; flagellar assembly protein FliH
D Rpal_1823 flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D Rpal_1824 flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ
D Rpal_4412 putative exported protein of unknown function K02418 fliO; flagellar protein FliO/FliZ
D Rpal_4413 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D Rpal_4408 export protein FliQ family 3 K02420 fliQ; flagellar biosynthesis protein FliQ
D Rpal_4407 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D Rpal_1828 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D Rpal_4406 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D Rpal_1458 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D Rpal_4420 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D Rpal_1460 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D Rpal_3578 surface presentation of antigens (SPOA) protein K02417 fliN; flagellar motor switch protein FliN
D Rpal_1457 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D Rpal_4432 flagellar P-ring protein K02394 flgI; flagellar P-ring protein FlgI
D Rpal_4424 flagella basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D Rpal_4425 flagellar L-ring protein K02393 flgH; flagellar L-ring protein FlgH
D Rpal_4421 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D Rpal_4409 flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D Rpal_1495 flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK
D Rpal_4411 flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D Rpal_4410 flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D Rpal_0101 protein of unknown function DUF1078 domain protein K02388 flgC; flagellar basal-body rod protein FlgC
D Rpal_0711 flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D Rpal_1494 flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D Rpal_4422 flagellar basal body rod protein K02391 flgF; flagellar basal-body rod protein FlgF
D Rpal_2294 flagellar basal body rod protein K02391 flgF; flagellar basal-body rod protein FlgF
D Rpal_4423 flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D Rpal_4433 chemotactic signal-response protein CheL K02395 flgJ; peptidoglycan hydrolase FlgJ
D Rpal_4455 protein of unknown function DUF1078 domain protein K02390 flgE; flagellar hook protein FlgE
D Rpal_0712 flagellar basal body FlaE domain protein K02390 flgE; flagellar hook protein FlgE
D Rpal_1843 protein of unknown function DUF1078 domain protein K02390 flgE; flagellar hook protein FlgE
D Rpal_4454 flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D Rpal_0715 flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D Rpal_0716 flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D Rpal_4453 conserved hypothetical protein K02397 flgL; flagellar hook-associated protein 3 FlgL
D Rpal_0707 flagellin domain protein K02406 fliC; flagellin
D Rpal_2540 protein of unknown function DUF1522 K02406 fliC; flagellin
D Rpal_4452 protein of unknown function DUF1522 K02406 fliC; flagellin
D Rpal_4438 protein of unknown function DUF1522 K02406 fliC; flagellin
D Rpal_0708 flagellar hook-associated 2 domain protein K02407 fliD; flagellar hook-associated protein 2
D Rpal_0709 putative flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS
D Rpal_2220 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA
D Rpal_2221 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
D Rpal_3243 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
D Rpal_0991 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
D Rpal_1461 two component, sigma54 specific, transcriptional regulator, Fis family K10943 flrC; two-component system, response regulator FlrC
D Rpal_4436 flagellar FlaF family protein K06602 flaF; flagellar biosynthesis activator protein FlaF
D Rpal_4437 flagellar FlbT family protein K06601 flbT; flagellar biosynthesis repressor protein FlbT
D Rpal_4197 Flp/Fap pilin component K02651 flp; pilus assembly protein Flp/PilA
D Rpal_0974 Flp/Fap pilin component K02651 flp; pilus assembly protein Flp/PilA
D Rpal_2088 Flp/Fap pilin component K02651 flp; pilus assembly protein Flp/PilA
D Rpal_4198 peptidase A24A prepilin type IV K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D Rpal_4199 Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D Rpal_4615 Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D Rpal_4200 type II and III secretion system protein K02280 cpaC; pilus assembly protein CpaC
D Rpal_4201 pilus (Caulobacter type) biogenesis lipoprotein CpaD K02281 cpaD; pilus assembly protein CpaD
D Rpal_4202 putative pilus assembly protein CpaE K02282 cpaE; pilus assembly protein CpaE
D Rpal_4203 type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:rpt04812]
D Rpal_4040 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D Rpal_4041 cell division protein FtsA K03590 ftsA; cell division protein FtsA
D Rpal_0294 Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein
D Rpal_3563 ATPase MipZ K03496 parA; chromosome partitioning protein
D Rpal_0293 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:rpt04147]
D Rpal_5302 heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG
D Rpal_1010 Fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D Rpal_3216 Phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Rpal_1014 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Rpal_1013 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D Rpal_2513 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Rpal_4673 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Rpal_1331 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Rpal_2457 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Rpal_0336 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D Rpal_4144 SMP-30/Gluconolaconase/LRE domain protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
D Rpal_2495 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D Rpal_3669 translation elongation factor Tu K02358 tuf; elongation factor Tu
D Rpal_3703 translation elongation factor Tu K02358 tuf; elongation factor Tu
D Rpal_3549 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D Rpal_4746 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Rpal_4572 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Rpal_1967 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Rpal_4237 dicarboxylate/CoA ligase PimA K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Rpal_1427 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Rpal_5310 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Rpal_2434 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Rpal_4908 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Rpal_1635 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Rpal_3607 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rpal_0886 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rpal_1903 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rpal_4830 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rpal_0532 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rpal_2547 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rpal_3956 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rpal_1956 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rpal_4236 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rpal_4545 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D Rpal_3646 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D Rpal_4990 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D Rpal_5225 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D Rpal_0397 Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D Rpal_2601 Cystathionine gamma-synthase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D Rpal_4944 Pyridoxal-dependent decarboxylase K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105]
D Rpal_5151 fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
D Rpal_5126 Inositol phosphatase/fructose-16-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D Rpal_4165 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D Rpal_4226 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D Rpal_1176 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Rpal_3315 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Rpal_4690 Glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Rpal_2988 Porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D Rpal_0005 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D Rpal_0408 transcriptional coactivator/pterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D Rpal_0396 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D Rpal_4789 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Rpal_1944 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Rpal_3323 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Rpal_0029 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D Rpal_3205 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Rpal_0180 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Rpal_5085 Electron transfer flavoprotein alpha/beta-subunit K03522 fixB; electron transfer flavoprotein alpha subunit
D Rpal_5231 Electron transfer flavoprotein alpha subunit K03522 fixB; electron transfer flavoprotein alpha subunit
D Rpal_4157 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D Rpal_3233 Triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 02048 Prokaryotic defense system [BR:rpt02048]
D Rpal_1502 restriction modification system DNA specificity domain K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D Rpal_1501 N-6 DNA methylase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D Rpal_1218 DNA methylase N-4/N-6 domain protein K13581 ccrM; modification methylase [EC:2.1.1.72]
D Rpal_0701 DNA methylase N-4/N-6 domain protein K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]
D Rpal_3927 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Rpal_0352 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Rpal_3802 type III restriction protein res subunit K01156 res; type III restriction enzyme [EC:3.1.21.5]
D Rpal_3803 Site-specific DNA-methyltransferase (adenine-specific) K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D Rpal_3982 HNH endonuclease K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]
D Rpal_1011 transcriptional modulator of MazE/toxin, MazF K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D Rpal_3974 transcriptional regulator/antitoxin, MazE K07172 mazE; antitoxin MazE
D Rpal_4022 protein of unknown function UPF0150 K18843 hicB; antitoxin HicB
D Rpal_4398 addiction module toxin, RelE/StbE family K19092 parE1_3_4; toxin ParE1/3/4
D Rpal_1265 plasmid stabilization system K19092 parE1_3_4; toxin ParE1/3/4
D Rpal_2525 plasmid maintenance system killer K07334 higB-1; toxin HigB-1
D Rpal_3615 plasmid maintenance system killer K07334 higB-1; toxin HigB-1
D Rpal_4827 plasmid maintenance system killer K07334 higB-1; toxin HigB-1
D Rpal_2763 plasmid maintenance system killer K07334 higB-1; toxin HigB-1
D Rpal_2524 putative plasmid maintenance system antidote protein, XRE family K21498 higA-1; antitoxin HigA-1
D Rpal_3616 plasmid maintenance system antidote protein, XRE family K21498 higA-1; antitoxin HigA-1
D Rpal_1484 plasmid maintenance system antidote protein, XRE family K21498 higA-1; antitoxin HigA-1
D Rpal_4828 plasmid maintenance system antidote protein, XRE family K21498 higA-1; antitoxin HigA-1
D Rpal_2764 plasmid maintenance system antidote protein, XRE family K21498 higA-1; antitoxin HigA-1
D Rpal_2204 PilT protein domain protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D Rpal_4620 PilT protein domain protein K19686 vapC; ribonuclease VapC [EC:3.1.-.-]
D Rpal_4619 Rv0623 family protein transcription factor K19687 vapB; antitoxin VapB
D Rpal_2505 PilT protein domain protein K07062 fitB; toxin FitB [EC:3.1.-.-]
D Rpal_4543 PilT protein domain protein K07062 fitB; toxin FitB [EC:3.1.-.-]
D Rpal_3939 conserved hypothetical protein K21495 fitA; antitoxin FitA
D Rpal_4040 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D Rpal_2978 DNA topoisomerase IV, A subunit K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D Rpal_2765 DNA topoisomerase IV, B subunit K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D Rpal_3252 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Rpal_2937 protein of unknown function DUF339 K09159 cptB; antitoxin CptB
D Rpal_5089 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Rpal_2741 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules [BR:rpt04090]
C 01504 Antimicrobial resistance genes [BR:rpt01504]
D Rpal_0195 aminoglycoside phosphotransferase K19300 aph3-II; aminoglycoside 3'-phosphotransferase II [EC:2.7.1.95]
D Rpal_3504 major facilitator superfamily MFS_1 K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein
D Rpal_0366 Beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D Rpal_4427 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Rpal_1684 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Rpal_2614 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Rpal_0099 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Rpal_4426 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family K18138 acrB; multidrug efflux pump
D Rpal_1685 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family K18138 acrB; multidrug efflux pump
D Rpal_0100 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family K18138 acrB; multidrug efflux pump
D Rpal_2841 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system
D Rpal_0097 transcriptional regulator, TetR family K18301 mexL; TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor
D Rpal_4901 acriflavin resistance protein K18303 mexK; multidrug efflux pump
D Rpal_2611 integral membrane sensor signal transduction histidine kinase K18143 adeS; two-component system, OmpR family, sensor histidine kinase AdeS [EC:2.7.13.3]
D Rpal_2612 two component transcriptional regulator, winged helix family K18144 adeR; two-component system, OmpR family, response regulator AdeR
D Rpal_2013 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein
D Rpal_2851 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein
D Rpal_3429 efflux transporter, RND family, MFP subunit K18901 bpeE; membrane fusion protein, multidrug efflux system
D Rpal_3428 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family K18902 bpeF; multidrug efflux pump
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:rpt00537]
D Rpal_0396 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:rpt03100]
D Rpal_R0047 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Rpal_R0054 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Rpal_R0002 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Rpal_R0007 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Rpal_R0026 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Rpal_R0012 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Rpal_R0008 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Rpal_R0036 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Rpal_R0010 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Rpal_R0028 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D Rpal_R0031 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D Rpal_R0027 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D Rpal_R0014 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D Rpal_R0042 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D Rpal_R0006 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Rpal_R0024 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Rpal_R0005 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Rpal_R0038 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Rpal_R0058 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Rpal_R0044 tRNA-His K14226 tRNA-His; tRNA His
D Rpal_R0048 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D Rpal_R0055 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D Rpal_R0009 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Rpal_R0041 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Rpal_R0035 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Rpal_R0001 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Rpal_R0033 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Rpal_R0029 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Rpal_R0020 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Rpal_R0016 tRNA-Met K14230 tRNA-Met; tRNA Met
D Rpal_R0019 tRNA-Met K14230 tRNA-Met; tRNA Met
D Rpal_R0034 tRNA-Met K14230 tRNA-Met; tRNA Met
D Rpal_R0018 tRNA-Met K14230 tRNA-Met; tRNA Met
D Rpal_R0051 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D Rpal_R0015 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Rpal_R0030 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Rpal_R0025 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Rpal_R0003 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Rpal_R0022 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Rpal_R0023 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Rpal_R0057 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Rpal_R0004 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Rpal_R0052 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Rpal_R0040 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Rpal_R0037 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D Rpal_R0039 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D Rpal_R0017 tRNA-Val K14237 tRNA-Val; tRNA Val
D Rpal_R0032 tRNA-Val K14237 tRNA-Val; tRNA Val
D Rpal_R0013 tRNA-Val K14237 tRNA-Val; tRNA Val
D Rpal_R0049 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Rpal_R0056 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Rpal_R0053 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Rpal_R0046 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Rpal_R0045 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Rpal_R0061 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Rpal_R0060 ffs; SRP RNA; RNA component of signal recognition particle K01983 ffs; SRP RNA
D Rpal_R0059 RNA component of RNaseP K01978 rnpB; M1 RNA
D Rpal_R0062 ssrA; prediction from ARAGORN by Dean Laslett (2004) K15035 ssrA; transfer-messenger RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D Rpal_4776 aldo/keto reductase K06222 dkgB; 2,5-diketo-D-gluconate reductase B [EC:1.1.1.346]
D Rpal_3571 aldo/keto reductase K06222 dkgB; 2,5-diketo-D-gluconate reductase B [EC:1.1.1.346]
D Rpal_3957 NAD-dependent epimerase/dehydratase K22025 denD; D-erythronate 2-dehydrogenase [EC:1.1.1.410]
D Rpal_4445 Transketolase central region K21417 acoB; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta [EC:1.1.1.-]
D Rpal_4812 glucose sorbosone dehydrogenase K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-]
D Rpal_3601 PQQ-dependent dehydrogenase, methanol/ethanol family K17760 qheDH; quinohemoprotein ethanol dehydrogenase [EC:1.1.9.1]
D Rpal_1883 Aldehyde Dehydrogenase K00154 E1.2.1.68; coniferyl-aldehyde dehydrogenase [EC:1.2.1.68]
D Rpal_4326 (2Fe-2S)-binding domain protein K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3]
D Rpal_5147 (2Fe-2S)-binding domain protein K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3]
D Rpal_4325 molybdopterin dehydrogenase FAD-binding K03519 coxM; aerobic carbon-monoxide dehydrogenase medium subunit [EC:1.2.5.3]
D Rpal_5149 Carbon-monoxide dehydrogenase (acceptor) K03519 coxM; aerobic carbon-monoxide dehydrogenase medium subunit [EC:1.2.5.3]
D Rpal_1760 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding K03520 coxL; aerobic carbon-monoxide dehydrogenase large subunit [EC:1.2.5.3]
D Rpal_2488 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding K03520 coxL; aerobic carbon-monoxide dehydrogenase large subunit [EC:1.2.5.3]
D Rpal_4497 Carbon-monoxide dehydrogenase (acceptor) K03520 coxL; aerobic carbon-monoxide dehydrogenase large subunit [EC:1.2.5.3]
D Rpal_5148 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding K03520 coxL; aerobic carbon-monoxide dehydrogenase large subunit [EC:1.2.5.3]
D Rpal_1417 indolepyruvate ferredoxin oxidoreductase, alpha subunit K00179 iorA; indolepyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.8]
D Rpal_1418 pyruvate ferredoxin/flavodoxin oxidoreductase K00180 iorB; indolepyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.8]
D Rpal_3608 pyruvate ferredoxin/flavodoxin oxidoreductase K04090 E1.2.7.8; indolepyruvate ferredoxin oxidoreductase [EC:1.2.7.8]
D Rpal_1554 Indolepyruvate ferredoxin oxidoreductase K04090 E1.2.7.8; indolepyruvate ferredoxin oxidoreductase [EC:1.2.7.8]
D Rpal_2496 Alcohol dehydrogenase zinc-binding domain protein K23256 curA; NADPH-dependent curcumin reductase [EC:1.3.1.-]
D Rpal_2159 coenzyme PQQ biosynthesis protein C K06137 pqqC; pyrroloquinoline-quinone synthase [EC:1.3.3.11]
D Rpal_1229 Electron-transferring-flavoprotein dehydrogenase K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1]
D Rpal_5084 Electron-transferring-flavoprotein dehydrogenase K00313 fixC; electron transfer flavoprotein-quinone oxidoreductase [EC:1.5.5.-]
D Rpal_0404 Alcohol dehydrogenase zinc-binding domain protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D Rpal_2949 Alcohol dehydrogenase zinc-binding domain protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D Rpal_3398 Alcohol dehydrogenase zinc-binding domain protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D Rpal_2478 Alcohol dehydrogenase zinc-binding domain protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D Rpal_2150 Alcohol dehydrogenase zinc-binding domain protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D Rpal_0985 NAD(P)H quinone oxidoreductase, PIG3 family K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D Rpal_2151 2-nitropropane dioxygenase NPD K23948 E1.6.5.9; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D Rpal_2214 Gluconate 2-dehydrogenase (acceptor) K19713 tsdA; thiosulfate dehydrogenase [EC:1.8.2.2]
D Rpal_4604 peptide methionine sulfoxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D Rpal_5321 peptide methionine sulfoxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D Rpal_4459 methionine-R-sulfoxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D Rpal_4603 methionine-R-sulfoxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D Rpal_2996 Glutathione S-transferase domain K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D Rpal_2476 Glutathione S-transferase domain K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D Rpal_2396 alpha/beta hydrolase fold K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10]
D Rpal_1520 alpha/beta hydrolase fold K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10]
D Rpal_2734 alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D Rpal_2721 Peroxidase K24158 prx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D Rpal_4674 OsmC family protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D Rpal_0897 OsmC family protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D Rpal_0137 hydrogenase, Fe-only K06441 E1.12.7.2G; ferredoxin hydrogenase gamma subunit [EC:1.12.7.2]
D Rpal_0980 Pirin domain protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D Rpal_3968 2OG-Fe(II) oxygenase K07336 K07336; PKHD-type hydroxylase [EC:1.14.11.-]
D Rpal_1091 multicopper oxidase type 3 K22348 moxA; manganese oxidase [EC:1.16.3.3]
D Rpal_4262 squalene-associated FAD-dependent desaturase K21677 hpnE; hydroxysqualene dehydroxylase [EC:1.17.8.1]
D Rpal_1766 oxidoreductase FAD/NAD(P)-binding domain protein K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D Rpal_4072 arsenate reductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D Rpal_4073 protein tyrosine phosphatase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D Rpal_2161 coenzyme PQQ biosynthesis protein E K06139 pqqE; PqqA peptide cyclase [EC:1.21.98.4]
D Rpal_2640 anaerobic ribonucleoside-triphosphate reductase activating protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D Rpal_0380 protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D Rpal_3179 protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D Rpal_2850 protein-L-isoaspartate(D-aspartate) O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D Rpal_3492 Cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D Rpal_2838 Cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D Rpal_0994 Cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D Rpal_4126 Trans-aconitate 2-methyltransferase K00598 tam; trans-aconitate 2-methyltransferase [EC:2.1.1.144]
D Rpal_2413 Coproporphyrinogen dehydrogenase K21936 chuW; anaerobilin synthase [EC:2.1.1.342]
D Rpal_4591 methyltransferase K05303 K05303; O-methyltransferase [EC:2.1.1.-]
D Rpal_4269 Radical SAM domain protein K22705 hpnP; hopanoid C-2 methylase [EC:2.1.1.-]
D Rpal_4499 Carbamoyltransferase K00612 nodU; carbamoyltransferase [EC:2.1.3.-]
D Rpal_4862 transferase hexapeptide repeat containing protein K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79]
D Rpal_1489 Beta-ketoacyl-acyl-carrier-protein synthase I K16872 E2.3.1.207; beta-ketodecanoyl-[acyl-carrier-protein] synthase [EC:2.3.1.207]
D Rpal_0448 apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D Rpal_4813 phospholipid/glycerol acyltransferase K22617 olsA; lyso-ornithine lipid O-acyltransferase [EC:2.3.1.270]
D Rpal_0990 GCN5-related N-acetyltransferase K03827 yjaB; putative acetyltransferase [EC:2.3.1.-]
D Rpal_2210 GCN5-related N-acetyltransferase K03830 yafP; putative acetyltransferase [EC:2.3.1.-]
D Rpal_2707 leucyl/phenylalanyl-tRNA/protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D Rpal_2986 Arginyltransferase K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29]
D Rpal_0318 putative hemolysin K22310 olsB; L-ornithine Nalpha-acyltransferase [EC:2.3.2.30]
D Rpal_5066 glycosyl transferase group 1 K00754 bshA; L-malate glycosyltransferase [EC:2.4.1.-]
D Rpal_1616 NAD(+)--dinitrogen-reductase ADP-D-ribosyltransferase K05951 draT; NAD+---dinitrogen-reductase ADP-D-ribosyltransferase [EC:2.4.2.37]
D Rpal_2657 NAD(+)--dinitrogen-reductase ADP-D-ribosyltransferase K05951 draT; NAD+---dinitrogen-reductase ADP-D-ribosyltransferase [EC:2.4.2.37]
D Rpal_1194 modD protein K03813 modD; molybdenum transport protein [EC:2.4.2.-]
D Rpal_2845 DTW domain containing protein K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25]
D Rpal_4263 squalene synthase HpnD K21678 hpnD; presqualene diphosphate synthase [EC:2.5.1.103]
D Rpal_4842 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D Rpal_2356 ApbE family lipoprotein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D Rpal_0616 PfkB domain protein K18478 yihV; sulfofructose kinase [EC:2.7.1.184]
D Rpal_0300 protein of unknown function DUF299 K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D Rpal_2144 (Glutamate--ammonia-ligase) adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D Rpal_3454 protein of unknown function UPF0061 K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108]
D Rpal_0350 (Isocitrate dehydrogenase (NADP(+))) kinase K00906 aceK; isocitrate dehydrogenase kinase/phosphatase [EC:2.7.11.5 3.1.3.-]
D Rpal_2155 formyl-CoA transferase K07749 frc; formyl-CoA transferase [EC:2.8.3.16]
D Rpal_5127 alpha/beta hydrolase fold K03928 yvaK; carboxylesterase [EC:3.1.1.1]
D Rpal_1797 Appr-1-p processing domain protein K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106]
D Rpal_2898 Carboxylesterase type B K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-]
D Rpal_4416 Carboxylesterase type B K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-]
D Rpal_1367 conserved hypothetical protein K18700 flK; fluoroacetyl-CoA thioesterase [EC:3.1.2.29]
D Rpal_1293 tol-pal system-associated acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D Rpal_3245 thioesterase superfamily; K07107 K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D Rpal_4476 thioesterase superfamily protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D Rpal_4019 conserved hypothetical protein; putative thioesterase superfamily K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D Rpal_4461 putative phosphohistidine phosphatase, SixA K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D Rpal_4821 beta-lactamase domain protein K25227 sdsA1; linear primary-alkylsulfatase [EC:3.1.6.21]
D Rpal_1202 beta-lactamase domain protein K25227 sdsA1; linear primary-alkylsulfatase [EC:3.1.6.21]
D Rpal_3117 hydrolase, TatD family K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D Rpal_3077 glycoside hydrolase family 24 K01185 E3.2.1.17; lysozyme [EC:3.2.1.17]
D Rpal_1549 glycosyl hydrolase family 88 K15532 yteR; unsaturated rhamnogalacturonyl hydrolase [EC:3.2.1.172]
D Rpal_2658 ADP-ribosyl-(dinitrogen reductase) hydrolase K05521 draG; ADP-ribosyl-[dinitrogen reductase] hydrolase [EC:3.2.2.24]
D Rpal_4745 Serine-type D-Ala-D-Ala carboxypeptidase K01286 E3.4.16.4; D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4]
D Rpal_3559 Serine-type D-Ala-D-Ala carboxypeptidase K01286 E3.4.16.4; D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4]
D Rpal_4057 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Rpal_0625 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D Rpal_0603 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128]
D Rpal_2751 Endoribonuclease L-PSP K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D Rpal_1376 ATPase associated with various cellular activities AAA_3 K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D Rpal_5136 L-fuculose-phosphate aldolase K24269 ald2; 5-deoxyribulose 1-phosphate aldolase [EC:4.1.2.62]
D Rpal_3313 carbohydrate kinase, YjeF related protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D Rpal_4264 squalene synthase HpnC K21679 hpnC; hydroxysqualene synthase [EC:4.2.3.156]
D Rpal_2896 Cystathionine gamma-synthase K26365 cangL; canavanine-gamma-lyase [EC:4.4.1.43]
D Rpal_2874 peptidyl-prolyl cis-trans isomerase cyclophilin type K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8]
D Rpal_2872 peptidyl-prolyl cis-trans isomerase cyclophilin type K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8]
D Rpal_1953 Hydroxypyruvate isomerase K22131 otnI; 2-dehydrotetronate isomerase [EC:5.3.1.35]
D Rpal_1989 AMP-dependent synthetase and ligase K12508 fcs; feruloyl-CoA synthase [EC:6.2.1.34]
D Rpal_1907 AMP-dependent synthetase and ligase K12508 fcs; feruloyl-CoA synthase [EC:6.2.1.34]
D Rpal_1553 AMP-dependent synthetase and ligase K02182 caiC; carnitine-CoA ligase [EC:6.2.1.48]
D Rpal_5316 AMP-dependent synthetase and ligase K02182 caiC; carnitine-CoA ligase [EC:6.2.1.48]
D Rpal_1042 copper-translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D Rpal_0014 copper-translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D Rpal_3238 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D Rpal_3679 heavy metal translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
D Rpal_2293 heavy metal translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
C 99981 Carbohydrate metabolism
C 99982 Energy metabolism
D Rpal_0806 formate dehydrogenase family accessory protein FdhD K02379 fdhD; FdhD protein
D Rpal_2078 ferredoxin K04755 fdx; ferredoxin, 2Fe-2S
D Rpal_4477 ferredoxin K04755 fdx; ferredoxin, 2Fe-2S
D Rpal_1933 putative ferredoxin K05337 fer; ferredoxin
D Rpal_0490 4Fe-4S ferredoxin iron-sulfur binding domain protein K05524 fdxA; ferredoxin
D Rpal_5090 Fe-S cluster assembly protein NifU K13819 K13819; NifU-like protein
D Rpal_5092 NifQ family protein K15790 nifQ; nitrogen fixation protein NifQ
D Rpal_2382 CitB domain protein K13795 citB; citrate/tricarballylate utilization protein
D Rpal_2383 precorrin 3B synthase CobZ K13796 cobZ; tricarballylate dehydrogenase
D Rpal_1644 von Willebrand factor type A K02448 norD; nitric oxide reductase NorD protein
D Rpal_1639 cytochrome c oxidase subunit III K02164 norE; nitric oxide reductase NorE protein
D Rpal_1640 hypothetical protein K04747 norF; nitric oxide reductase NorF protein
D Rpal_1643 ATPase associated with various cellular activities AAA_5 K04748 norQ; nitric oxide reductase NorQ protein
D Rpal_5096 nitrogen fixation protein NifX K02596 nifX; nitrogen fixation protein NifX
D Rpal_5104 nitrogen fixation protein FixT K02593 nifT; nitrogen fixation protein NifT
D Rpal_5105 NifZ family protein K02597 nifZ; nitrogen fixation protein NifZ
D Rpal_5106 NifZ family protein K02597 nifZ; nitrogen fixation protein NifZ
D Rpal_5111 nitrogenase cofactor biosynthesis protein NifB K02585 nifB; nitrogen fixation protein NifB
D Rpal_2598 Radical SAM domain protein K02585 nifB; nitrogen fixation protein NifB
D Rpal_2906 Radical SAM domain protein K02585 nifB; nitrogen fixation protein NifB
D Rpal_5097 nitrogenase molybdenum-iron cofactor biosynthesis protein NifN K02592 nifN; nitrogenase molybdenum-iron protein NifN
D Rpal_5098 nitrogenase MoFe cofactor biosynthesis protein NifE K02587 nifE; nitrogenase molybdenum-cofactor synthesis protein NifE
D Rpal_2408 flavodoxin K03839 fldA; flavodoxin I
D Rpal_5086 Electron transfer flavoprotein alpha/beta-subunit K03521 fixA; electron transfer flavoprotein beta subunit
D Rpal_5232 Electron transfer flavoprotein alpha/beta-subunit K03521 fixA; electron transfer flavoprotein beta subunit
D Rpal_5083 putative ferredoxin protein, FixX K03855 fixX; ferredoxin like protein
D Rpal_5087 nitrogen fixation protein NifW K02595 nifW; nitrogenase-stabilizing/protective protein
D Rpal_1627 aspartate/glutamate/uridylate kinase K00947 mosAB; molybdenum storage protein
D Rpal_1626 aspartate/glutamate/uridylate kinase K00947 mosAB; molybdenum storage protein
D Rpal_2449 conserved hypothetical protein K21694 cowN; N(2)-fixation sustaining protein CowN
C 99983 Lipid metabolism
D Rpal_0592 acyl-CoA dehydrogenase domain protein K09456 aidB; putative acyl-CoA dehydrogenase
D Rpal_3525 acyl-CoA dehydrogenase domain protein K09456 aidB; putative acyl-CoA dehydrogenase
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D Rpal_0349 protein of unknown function DUF540 K06203 cysZ; CysZ protein
D Rpal_1860 Glyoxalase/bleomycin resistance protein/dioxygenase K08234 yaeR; glyoxylase I family protein
D Rpal_3134 alanine racemase domain protein K06997 yggS; PLP dependent protein
D Rpal_0288 alanine racemase domain protein K06997 yggS; PLP dependent protein
D Rpal_4658 conserved hypothetical protein K21700 bauB; beta-alanine degradation protein BauB
D Rpal_4143 GCN5-related N-acetyltransferase K22479 argA; N-acetyltransferase
C 99986 Glycan metabolism
D Rpal_5268 conserved hypothetical protein K07027 K07027; glycosyltransferase 2 family protein
D Rpal_4504 conserved hypothetical protein K07027 K07027; glycosyltransferase 2 family protein
D Rpal_4466 conserved hypothetical protein K07027 K07027; glycosyltransferase 2 family protein
C 99987 Cofactor metabolism
D Rpal_0786 cobalamin biosynthesis protein CobW K02234 cobW; cobalamin biosynthesis protein CobW
D Rpal_0259 HemY domain protein K02498 hemY; HemY protein
D Rpal_0085 2-polyprenylphenol 6-hydroxylase K03688 ubiB; ubiquinone biosynthesis protein
D Rpal_1002 conserved hypothetical protein K24843 ubiT; O2-independent ubiquinone biosynthesis accessory factor UbiT
D Rpal_1698 magnesium chelatase accessory protein K06049 bchO; magnesium chelatase accessory protein
D Rpal_0348 magnesium chelatase accessory protein K06049 bchO; magnesium chelatase accessory protein
D Rpal_2858 cyclase/dehydrase K18588 COQ10; coenzyme Q-binding protein COQ10
C 99988 Secondary metabolism
D Rpal_3211 NADPH-dependent FMN reductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone)
D Rpal_0339 NADPH-dependent FMN reductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone)
C 99999 Others
D Rpal_4607 DoxX family protein K15977 K15977; putative oxidoreductase
D Rpal_3451 DoxX family protein K15977 K15977; putative oxidoreductase
D Rpal_0548 phospholipase/Carboxylesterase K06999 K06999; phospholipase/carboxylesterase
D Rpal_4719 GCN5-related N-acetyltransferase K09181 yfiQ; acetyltransferase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D Rpal_3463 cold-shock DNA-binding domain protein K03704 cspA; cold shock protein
D Rpal_4194 cold-shock DNA-binding domain protein K03704 cspA; cold shock protein
D Rpal_1364 cold-shock DNA-binding domain protein K03704 cspA; cold shock protein
D Rpal_3878 cold-shock DNA-binding domain protein K03704 cspA; cold shock protein
D Rpal_2801 cold-shock DNA-binding domain protein K03704 cspA; cold shock protein
D Rpal_0275 nitrogen regulatory protein P-II K04752 glnK; nitrogen regulatory protein P-II 2
D Rpal_0277 nitrogen regulatory protein P-II K04752 glnK; nitrogen regulatory protein P-II 2
D Rpal_0587 RNA binding S1 domain protein K06959 tex; protein Tex
C 99974 Translation
D Rpal_0749 ABC transporter related K13926 rbbA; ribosome-dependent ATPase
D Rpal_4627 beta-lactamase domain protein K07576 K07576; metallo-beta-lactamase family protein
D Rpal_1078 beta-lactamase domain protein K07576 K07576; metallo-beta-lactamase family protein
D Rpal_0871 putative metallo-hydrolase/oxidoreductase K07577 K07577; putative mRNA 3-end processing factor
C 99975 Protein processing
D Rpal_1396 ATP-dependent Clp protease adaptor protein ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D Rpal_3557 ATP-dependent Clp protease adaptor protein ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D Rpal_3310 trigger factor K03545 tig; trigger factor
D Rpal_4180 UreE urease accessory domain protein K03187 ureE; urease accessory protein
D Rpal_4179 Urease accessory protein UreF K03188 ureF; urease accessory protein
D Rpal_4708 urease accessory protein UreG K03189 ureG; urease accessory protein
D Rpal_4186 Urease accessory protein UreD K03190 ureD; urease accessory protein
D Rpal_1158 HupE/UreJ protein K03192 ureJ; urease accessory protein
D Rpal_2963 SsrA-binding protein K03664 smpB; SsrA-binding protein
D Rpal_1159 hydrogenase assembly chaperone hypC/hupF K04653 hypC; hydrogenase expression/formation protein HypC
D Rpal_1168 hydrogenase assembly chaperone hypC/hupF K04653 hypC; hydrogenase expression/formation protein HypC
D Rpal_1169 hydrogenase expression/formation protein HypD K04654 hypD; hydrogenase expression/formation protein HypD
D Rpal_1170 hydrogenase expression/formation protein HypE K04655 hypE; hydrogenase expression/formation protein HypE
D Rpal_1167 (NiFe) hydrogenase maturation protein HypF K04656 hypF; hydrogenase maturation protein HypF
D Rpal_0320 Mg chelatase, subunit ChlI K07391 comM; magnesium chelatase family protein
D Rpal_2468 20S proteasome A and B subunits K07395 K07395; putative proteasome-type protease
D Rpal_4321 conserved hypothetical protein K07402 xdhC; xanthine dehydrogenase accessory factor
D Rpal_5115 conserved hypothetical protein K07402 xdhC; xanthine dehydrogenase accessory factor
C 99976 Replication and repair
D Rpal_4880 conserved hypothetical protein K07454 K07454; putative restriction endonuclease
D Rpal_0389 DNA repair protein RadC K03630 radC; DNA repair protein RadC
D Rpal_0624 protein of unknown function DUF195 K09760 rmuC; DNA recombination protein RmuC
D Rpal_0325 protein of unknown function UPF0102 K07460 yraN; putative endonuclease
D Rpal_4225 Excinuclease ABC C subunit domain protein K07461 K07461; putative endonuclease
D Rpal_4146 Excinuclease ABC C subunit domain protein K07461 K07461; putative endonuclease
D Rpal_4335 Excinuclease ABC C subunit domain protein K07461 K07461; putative endonuclease
D Rpal_4036 conserved hypothetical protein K07461 K07461; putative endonuclease
D Rpal_0062 Excinuclease ABC C subunit domain protein K07461 K07461; putative endonuclease
D Rpal_3531 DNA protecting protein DprA K04096 smf; DNA processing protein
D Rpal_3056 phage terminase, large subunit, PBSX family K06909 xtmB; phage terminase large subunit
D Rpal_3636 AAA ATPase central domain protein K07478 ycaJ; putative ATPase
D Rpal_4989 transposase IS4 family protein K07481 K07481; transposase, IS5 family
D Rpal_1112 transposase IS3/IS911 family protein K07483 K07483; transposase
D Rpal_1111 IS66 Orf2 family protein K07484 K07484; transposase
D Rpal_5211 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase
D Rpal_3708 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase
D Rpal_1095 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase
D Rpal_1074 transposase IS4 family protein K07492 K07492; putative transposase
D Rpal_4596 transposase IS3/IS911 family protein K07497 K07497; putative transposase
D Rpal_4597 Integrase catalytic region K07497 K07497; putative transposase
D Rpal_0646 Integrase catalytic region K07497 K07497; putative transposase
D Rpal_3365 Integrase catalytic region K07497 K07497; putative transposase
D Rpal_1567 Integrase catalytic region K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D Rpal_0620 conserved hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D Rpal_1645 conserved hypothetical protein K21990 yfdC; formate-nitrite transporter family protein
D Rpal_0590 amino acid permease-associated region K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D Rpal_3972 acriflavin resistance protein K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
D Rpal_3305 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
D Rpal_2523 phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family
D Rpal_2689 phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family
D Rpal_2461 Na+ dependent nucleoside transporter domain protein K03317 TC.CNT; concentrative nucleoside transporter, CNT family
C 99978 Cell growth
D Rpal_0206 intracellular septation protein A K06190 ispZ; intracellular septation protein
D Rpal_2637 hypothetical protein K06410 spoVFA; dipicolinate synthase subunit A
D Rpal_0163 Peptidase M23 K22719 envC; murein hydrolase activator
C 99993 Cell motility
D Rpal_2753 TfoX domain protein K07343 tfoX; DNA transformation protein and related proteins
C 99995 Signaling proteins
D Rpal_4462 UspA domain protein K14061 uspF; universal stress protein F
D Rpal_0412 GTP-binding protein TypA K06207 typA; GTP-binding protein
D Rpal_0550 anti-ECFsigma factor, ChrR K07167 chrR; putative transcriptional regulator
D Rpal_0451 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D Rpal_0008 KaiB domain protein K08481 kaiB; circadian clock protein KaiB
D Rpal_0009 putative circadian clock protein, KaiC K08482 kaiC; circadian clock protein KaiC
C 99992 Structural proteins
D Rpal_4994 OmpW family protein K07275 ompW; outer membrane protein
D Rpal_4636 AsmA family protein K07289 asmA; AsmA protein
D Rpal_5162 AsmA family protein K07289 asmA; AsmA protein
D Rpal_0945 protein of unknown function DUF107 K07340 ybbJ; inner membrane protein
D Rpal_4312 conserved hypothetical protein K01993 ABC-2.TX; HlyD family secretion protein
D Rpal_0748 secretion protein HlyD family protein K01993 ABC-2.TX; HlyD family secretion protein
D Rpal_1839 efflux transporter, RND family, MFP subunit K02005 ABC.CD.TX; HlyD family secretion protein
D Rpal_2131 CcmE/CycJ protein K02197 ccmE; cytochrome c-type biogenesis protein CcmE
D Rpal_2130 cytochrome c-type biogenesis protein CcmI K02200 ccmH; cytochrome c-type biogenesis protein CcmH
D Rpal_2133 cytochrome C biogenesis protein K02200 ccmH; cytochrome c-type biogenesis protein CcmH
C 99994 Others
D Rpal_5262 phosphate uptake regulator, PhoU K02039 phoU; phosphate transport system protein
D Rpal_4121 putative bacterioferritin K02192 bfd; bacterioferritin-associated ferredoxin
D Rpal_3220 periplasmic glucan biosynthesis protein MdoG K03670 mdoG; periplasmic glucans biosynthesis protein
D Rpal_0777 CutA1 divalent ion tolerance protein K03926 cutA; periplasmic divalent cation tolerance protein
D Rpal_0758 phosphonate C-P lyase system protein PhnK K05781 phnK; putative phosphonate transport system ATP-binding protein
D Rpal_5255 ApaG domain protein K06195 apaG; ApaG protein
D Rpal_1832 diguanylate cyclase K07216 hr; hemerythrin
D Rpal_2352 periplasmic copper-binding K07218 nosD; nitrous oxidase accessory protein
D Rpal_2511 putative monooxygenase protein K07222 K07222; putative flavoprotein involved in K+ transport
D Rpal_2417 protein of unknown function DUF1008 K07227 chuX; heme iron utilization protein
D Rpal_1673 NnrS family protein K07234 K07234; uncharacterized protein involved in response to NO
D Rpal_2355 NosL family protein K19342 nosL; copper chaperone NosL
B
B 09194 Poorly characterized
C 99996 General function prediction only
D Rpal_3500 Colicin V production protein K03558 cvpA; membrane protein required for colicin V production
D Rpal_2124 chitinase-like protein K03791 K03791; putative chitinase
D Rpal_0379 ChaB family protein K06197 chaB; cation transport regulator
D Rpal_2158 coenzyme PQQ biosynthesis protein B K06136 pqqB; pyrroloquinoline quinone biosynthesis protein B
D Rpal_2160 coenzyme PQQ synthesis D K06138 pqqD; pyrroloquinoline quinone biosynthesis protein D
D Rpal_2995 globin K06886 glbN; hemoglobin
D Rpal_4688 Patatin K07001 K07001; NTE family protein
D Rpal_3892 Patatin K07001 K07001; NTE family protein
D Rpal_0631 pyrimidine 5'-nucleotidase K07025 K07025; putative hydrolase of the HAD superfamily
D Rpal_4067 HAD-superfamily hydrolase, phosphatase K07025 K07025; putative hydrolase of the HAD superfamily
D Rpal_2742 FeS assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D Rpal_2744 FeS assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD
D Rpal_1440 ribonuclease BN K07058 K07058; membrane protein
D Rpal_5235 ribonuclease BN K07058 K07058; membrane protein
D Rpal_3833 ribonuclease BN K07058 K07058; membrane protein
D Rpal_2061 Fe-S metabolism associated SufE K02426 sufE; cysteine desulfuration protein SufE
D Rpal_3682 Glyoxalase/bleomycin resistance protein/dioxygenase K04750 phnB; PhnB protein
D Rpal_2635 ferric iron reductase K13255 fhuF; ferric iron reductase protein FhuF
D Rpal_1761 LemA family protein K03744 lemA; LemA protein
D Rpal_4985 LemA family protein K03744 lemA; LemA protein
D Rpal_4907 SlyX family protein K03745 slyX; SlyX protein
D Rpal_3447 CreA family protein K05805 creA; CreA protein
D Rpal_0584 protein of unknown function DUF1304 K08987 K08987; putative membrane protein
D Rpal_1771 conserved hypothetical protein K08990 ycjF; putative membrane protein
D Rpal_3731 conserved hypothetical protein K08995 K08995; putative membrane protein
D Rpal_3401 conserved hypothetical protein K08995 K08995; putative membrane protein
D Rpal_3524 SEC-C motif domain protein K09858 K09858; SEC-C motif domain protein
D Rpal_1490 conserved hypothetical protein K11312 K11312; cupin 2 domain-containing protein
D Rpal_1161 HupH hydrogenase expression protein K03618 hyaF; hydrogenase-1 operon protein HyaF
D Rpal_1160 hydrogenase-1 expression HyaE K03619 hyaE; hydrogenase-1 operon protein HyaE
D Rpal_4769 phosphate-starvation-inducible E K13256 psiE; protein PsiE
D Rpal_4993 PhnA protein K06193 phnA; protein PhnA
C 99997 Function unknown
D Rpal_1762 protein of unknown function DUF477 K06872 K06872; uncharacterized protein
D Rpal_0684 hypothetical protein K06903 W; Bacteriophage baseplate protein W
D Rpal_0698 late control D family protein K06905 D; Bacteriophage probable baseplate hub protein
D Rpal_0691 Phage tail sheath protein FI-like protein K06907 FI; Bacteriophage tail sheath protein
D Rpal_1772 protein of unknown function DUF463 YcjX family protein K06918 K06918; uncharacterized protein
D Rpal_3174 protein of unknown function DUF815 K06923 K06923; uncharacterized protein
D Rpal_3103 conserved hypothetical protein K06929 K06929; uncharacterized protein
D Rpal_2184 protein of unknown function DUF1289 K06938 K06938; uncharacterized protein
D Rpal_1919 protein of unknown function UPF0153 K06940 K06940; uncharacterized protein
D Rpal_0876 metallophosphoesterase K06953 K06953; uncharacterized protein
D Rpal_2840 amine oxidase K06954 K06954; uncharacterized protein
D Rpal_3163 conserved hypothetical protein K06975 K06975; uncharacterized protein
D Rpal_5081 protein of unknown function DUF861 cupin_3 K06995 K06995; uncharacterized protein
D Rpal_4267 putative RND superfamily transporter K07003 K07003; uncharacterized protein
D Rpal_4254 hopanoid biosynthesis associated RND transporter like protein HpnN K07003 K07003; uncharacterized protein
D Rpal_1617 5-nitroimidazole antibiotic resistance protein K07005 K07005; uncharacterized protein
D Rpal_0754 pyridoxamine 5'-phosphate oxidase-related FMN-binding K07006 K07006; uncharacterized protein
D Rpal_1894 pyridoxamine 5'-phosphate oxidase-related FMN-binding K07006 K07006; uncharacterized protein
D Rpal_1920 pyridoxamine 5'-phosphate oxidase-related FMN-binding K07006 K07006; uncharacterized protein
D Rpal_2740 conserved hypothetical protein K07018 K07018; uncharacterized protein
D Rpal_0772 conserved hypothetical protein K07019 K07019; uncharacterized protein
D Rpal_1145 conserved hypothetical protein K07020 K07020; uncharacterized protein
D Rpal_4721 conserved hypothetical protein K07028 K07028; uncharacterized protein
D Rpal_2456 yecA family protein K07039 K07039; uncharacterized protein
D Rpal_4678 amidohydrolase 2 K07045 K07045; uncharacterized protein
D Rpal_1219 protein of unknown function zinc metallopeptidase putative K07054 K07054; uncharacterized protein
D Rpal_3606 protein of unknown function DUF35 K07068 K07068; uncharacterized protein
D Rpal_3951 conserved hypothetical protein K07068 K07068; uncharacterized protein
D Rpal_0279 DNA polymerase beta domain protein region K07075 K07075; uncharacterized protein
D Rpal_5002 TRAP transporter solute receptor, TAXI family K07080 K07080; uncharacterized protein
D Rpal_4076 permease K07089 K07089; uncharacterized protein
D Rpal_0115 protein of unknown function DUF81 K07090 K07090; uncharacterized protein
D Rpal_1204 protein of unknown function DUF81 K07090 K07090; uncharacterized protein
D Rpal_2075 protein of unknown function DUF81 K07090 K07090; uncharacterized protein
D Rpal_2422 protein of unknown function DUF81 K07090 K07090; uncharacterized protein
D Rpal_0881 protein of unknown function DUF81 K07090 K07090; uncharacterized protein
D Rpal_0368 protein of unknown function DUF81 K07090 K07090; uncharacterized protein
D Rpal_1898 protein of unknown function DUF81 K07090 K07090; uncharacterized protein
D Rpal_0970 protein of unknown function DUF81 K07090 K07090; uncharacterized protein
D Rpal_1579 protein of unknown function DUF395 YeeE/YedE K07112 K07112; uncharacterized protein
D Rpal_4968 protein of unknown function DUF395 YeeE/YedE K07112 K07112; uncharacterized protein
D Rpal_4970 protein of unknown function DUF395 YeeE/YedE K07112 K07112; uncharacterized protein
D Rpal_4392 nuclear protein SET K07117 K07117; uncharacterized protein
D Rpal_0543 membrane protein AbrB duplication K07120 K07120; uncharacterized protein
D Rpal_0423 short-chain dehydrogenase/reductase SDR K07124 K07124; uncharacterized protein
D Rpal_1008 Sel1 domain protein repeat-containing protein K07126 K07126; uncharacterized protein
D Rpal_3512 Sel1 domain protein repeat-containing protein K07126 K07126; uncharacterized protein
D Rpal_4922 MOSC domain containing protein K07140 K07140; MOSC domain-containing protein
D Rpal_0269 peptidase S16 lon domain protein K07157 K07157; uncharacterized protein
D Rpal_0813 VWA containing CoxE family protein K07161 K07161; uncharacterized protein
D Rpal_4323 VWA containing CoxE family protein K07161 K07161; uncharacterized protein
D Rpal_3875 protein of unknown function DUF37 K08998 K08998; uncharacterized protein
D Rpal_4969 Domain of unknown function DUF1791 K09004 K09004; uncharacterized protein
D Rpal_2802 protein of unknown function DUF192 K09005 K09005; uncharacterized protein
D Rpal_1472 GatB/YqeY K09117 K09117; uncharacterized protein
D Rpal_0418 protein of unknown function DUF167 K09131 K09131; uncharacterized protein
D Rpal_2074 protein of unknown function UPF0153 K09160 K09160; uncharacterized protein
D Rpal_4327 carbon monoxide dehydrogenase subunit G K09386 K09386; uncharacterized protein
D Rpal_2839 protein of unknown function DUF1365 K09701 K09701; uncharacterized protein
D Rpal_0615 protein of unknown function DUF985 K09705 K09705; uncharacterized protein
D Rpal_2485 protein of unknown function DUF188 K09768 K09768; uncharacterized protein
D Rpal_2361 protein of unknown function DUF378 K09779 K09779; uncharacterized protein
D Rpal_0270 protein of unknown function DUF343 K09791 K09791; uncharacterized protein
D Rpal_0965 protein of unknown function DUF459 K09795 K09795; uncharacterized protein
D Rpal_0165 protein of unknown function DUF610 YibQ K09798 K09798; uncharacterized protein
D Rpal_4127 protein of unknown function DUF497 K09803 K09803; uncharacterized protein
D Rpal_4929 protein of unknown function DUF497 K09803 K09803; uncharacterized protein
D Rpal_3226 protein of unknown function DUF497 K09803 K09803; uncharacterized protein
D Rpal_0249 protein of unknown function DUF541 K09807 K09807; uncharacterized protein
D Rpal_3405 conserved hypothetical protein K09822 K09822; uncharacterized protein
D Rpal_5017 protein of unknown function DUF329 K09862 K09862; uncharacterized protein
D Rpal_3548 protein of unknown function DUF482 K09919 K09919; uncharacterized protein
D Rpal_2195 conserved hypothetical protein K09924 K09924; uncharacterized protein
D Rpal_4003 conserved hypothetical protein K09937 K09937; uncharacterized protein
D Rpal_1337 putative periplasmic ligand-binding sensor protein K09945 K09945; uncharacterized protein
D Rpal_4671 protein of unknown function DUF1244 K09948 K09948; uncharacterized protein
D Rpal_2619 conserved hypothetical protein K09956 K09956; uncharacterized protein
D Rpal_1296 protein of unknown function DUF1348 K09958 K09958; uncharacterized protein
D Rpal_1590 urea carboxylase-associated protein 2 K09967 K09967; uncharacterized protein
D Rpal_1589 urea carboxylase-associated protein 1 K09967 K09967; uncharacterized protein
D Rpal_4013 protein of unknown function DUF1321 K09985 K09985; uncharacterized protein
D Rpal_1377 protein of unknown function DUF1285 K09986 K09986; uncharacterized protein
D Rpal_4752 protein of unknown function DUF1013 K09987 K09987; uncharacterized protein
D Rpal_4135 conserved hypothetical protein K09989 K09989; uncharacterized protein
D Rpal_2852 conserved hypothetical protein K09991 K09991; uncharacterized protein
D Rpal_2522 protein of unknown function DUF47 K07220 K07220; uncharacterized protein
D Rpal_0441 protein of unknown function DUF448 K07742 ylxR; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 2, 2024