+D GENES KO #

  KEGG Orthology (KO) - Rhodococcus pyridinivorans SB3094

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:rpy00010] D Y013_11560 sugar kinase K25026 glk; glucokinase [EC:2.7.1.2] D Y013_05890 glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D Y013_21115 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Y013_12040 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Y013_02480 phosphofructokinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11] D Y013_06770 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D Y013_21905 glpX; fructose 1,6-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D Y013_14720 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Y013_10600 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Y013_02550 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D Y013_03640 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Y013_02540 gapA; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Y013_02545 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D Y013_09450 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D Y013_21695 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Y013_05305 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Y013_05160 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D Y013_06210 pyruvate dehydrogenase E1 K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D Y013_12635 diaminohydroxyphosphoribosylaminopyrimidine deaminase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D Y013_06045 dihydrolipoamide acyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D Y013_13970 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Y013_09850 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Y013_12640 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Y013_11835 2-oxoglutarate ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Y013_11830 2-oxoacid ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Y013_01965 lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D Y013_06250 alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D Y013_26015 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D Y013_15285 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D Y013_11165 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D Y013_09745 zinc-binding dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D Y013_23855 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Y013_24210 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Y013_11580 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Y013_08725 aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-] D Y013_01195 AMP-dependent synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Y013_25910 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Y013_18500 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Y013_07220 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Y013_01840 polyphosphate glucokinase K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63] D Y013_11615 phosphoenolpyruvate carboxykinase K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] D Y013_08670 hypothetical protein K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] C 00020 Citrate cycle (TCA cycle) [PATH:rpy00020] D Y013_20600 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D Y013_20640 gltA; type II citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D Y013_02720 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D Y013_23605 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D Y013_03200 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D Y013_08055 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D Y013_23100 kgd; alpha-ketoglutarate decarboxylase K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61] D Y013_13970 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Y013_09850 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Y013_12640 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Y013_11835 2-oxoglutarate ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Y013_11830 2-oxoacid ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Y013_21145 succinyl-CoA synthetase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D Y013_21140 succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D Y013_00860 acetyl-CoA hydrolase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18] D Y013_05560 sdhA; succinate dehydrogenase K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D Y013_08020 succinate dehydrogenase K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D Y013_05555 fumarate reductase K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D Y013_08025 succinate dehydrogenase K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D Y013_08010 succinate dehydrogenase K00241 sdhC; succinate dehydrogenase cytochrome b subunit D Y013_08015 succinate dehydrogenase K00242 sdhD; succinate dehydrogenase membrane anchor subunit D Y013_22700 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D Y013_21900 aspartate ammonia-lyase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D Y013_01225 malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4] D Y013_03145 malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4] D Y013_00905 pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1] D Y013_11615 phosphoenolpyruvate carboxykinase K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] D Y013_06210 pyruvate dehydrogenase E1 K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D Y013_12635 diaminohydroxyphosphoribosylaminopyrimidine deaminase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D Y013_06045 dihydrolipoamide acyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] C 00030 Pentose phosphate pathway [PATH:rpy00030] D Y013_21115 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Y013_12040 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Y013_02615 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D Y013_02605 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31] D Y013_04450 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D Y013_02490 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D Y013_02625 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Y013_02620 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D Y013_00540 ribose 5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D Y013_03975 phosphoketolase K01621 xfp; xylulose-5-phosphate/fructose-6-phosphate phosphoketolase [EC:4.1.2.9 4.1.2.22] D Y013_09545 deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4] D Y013_19595 sugar kinase K00852 rbsK; ribokinase [EC:2.7.1.15] D Y013_07220 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Y013_21590 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D Y013_23805 hypothetical protein K01053 gnl; gluconolactonase [EC:3.1.1.17] D Y013_14720 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Y013_10600 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Y013_21905 glpX; fructose 1,6-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D Y013_02480 phosphofructokinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11] D Y013_06770 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] C 00040 Pentose and glucuronate interconversions [PATH:rpy00040] D Y013_21305 UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Y013_02490 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D Y013_22160 xylulokinase K00854 xylB; xylulokinase [EC:2.7.1.17] D Y013_22145 sorbitol dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14] D Y013_18110 aldehyde dehydrogenase K22187 xylA; alpha-ketoglutaric semialdehyde dehydrogenase [EC:1.2.1.-] C 00051 Fructose and mannose metabolism [PATH:rpy00051] D Y013_07000 endoglucanase K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78] D Y013_15450 mannan endo-1,4-beta-mannosidase K19355 MAN; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78] D Y013_11330 mannan endo-1,4-beta-mannosidase K19355 MAN; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78] D Y013_03040 mannan endo-1,4-beta-mannosidase K19355 MAN; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78] D Y013_22155 ribokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D Y013_07625 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D Y013_07635 manB; phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D Y013_07955 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D Y013_07675 GDP-mannose pyrophosphorylase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D Y013_02480 phosphofructokinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11] D Y013_06770 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D Y013_21905 glpX; fructose 1,6-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D Y013_01595 phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] D Y013_09675 phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] D Y013_22145 sorbitol dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14] D Y013_22150 mannitol 2-dehydrogenase K00045 E1.1.1.67; mannitol 2-dehydrogenase [EC:1.1.1.67] D Y013_14720 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Y013_10600 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Y013_02550 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D Y013_00540 ribose 5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D Y013_01590 PTS lactose transporter subunit IIC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] C 00052 Galactose metabolism [PATH:rpy00052] D Y013_14760 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D Y013_10640 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D Y013_14765 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] D Y013_10645 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] D Y013_01700 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Y013_09385 hypothetical protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Y013_21650 nucleoside-diphosphate sugar epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Y013_21305 UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Y013_07220 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Y013_11560 sugar kinase K25026 glk; glucokinase [EC:2.7.1.2] D Y013_05890 glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D Y013_17410 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D Y013_02480 phosphofructokinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11] D Y013_06770 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D Y013_00490 alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] C 00053 Ascorbate and aldarate metabolism [PATH:rpy00053] D Y013_23805 hypothetical protein K01053 gnl; gluconolactonase [EC:3.1.1.17] D Y013_23855 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Y013_24210 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Y013_11580 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00500 Starch and sucrose metabolism [PATH:rpy00500] D Y013_00490 alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D Y013_21305 UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Y013_23530 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Y013_22930 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D Y013_06890 glycogen synthase K16150 K16150; glycogen synthase [EC:2.4.1.11] D Y013_00095 glycogen branching protein K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D Y013_06885 1,4-alpha-glucan branching protein K16149 K16149; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D Y013_00105 glycogen phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D Y013_20295 trehalose synthase K05343 treS; maltose alpha-D-glucosyltransferase / alpha-amylase [EC:5.4.99.16 3.2.1.1] D Y013_24260 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25] D Y013_20290 maltokinase K16146 pep2; maltokinase [EC:2.7.1.175] D Y013_00100 alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase K16147 glgE; starch synthase (maltosyl-transferring) [EC:2.4.99.16] D Y013_22925 glycosyl transferase family 1 K16148 glgM; alpha-maltose-1-phosphate synthase [EC:2.4.1.342] D Y013_08670 hypothetical protein K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D Y013_05600 glycogen debranching protein K01214 ISA; isoamylase [EC:3.2.1.68] D Y013_06940 glycogen debranching protein K01214 ISA; isoamylase [EC:3.2.1.68] D Y013_05605 maltooligosyl trehalose synthase K06044 treY; (1->4)-alpha-D-glucan 1-alpha-D-glucosylmutase [EC:5.4.99.15] D Y013_05640 malto-oligosyltrehalose trehalohydrolase K01236 treZ; maltooligosyltrehalose trehalohydrolase [EC:3.2.1.141] D Y013_19535 trehalose-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347] D Y013_09705 trehalose-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347] D Y013_03990 haloacid dehalogenase K01087 otsB; trehalose 6-phosphate phosphatase [EC:3.1.3.12] D Y013_06540 glycosyl hydrolase family 15 K22934 E3.2.1.28; alpha,alpha-trehalase [EC:3.2.1.28] D Y013_04355 glycoside hydrolase K22934 E3.2.1.28; alpha,alpha-trehalase [EC:3.2.1.28] D Y013_07220 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Y013_11560 sugar kinase K25026 glk; glucokinase [EC:2.7.1.2] D Y013_05890 glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D Y013_21115 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Y013_12040 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Y013_22155 ribokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:rpy00520] D Y013_11505 beta-glucosidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D Y013_08670 hypothetical protein K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D Y013_22155 ribokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D Y013_08325 glutamine amidotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Y013_08350 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D Y013_21595 glmU; N-acetylglucosamine-1-phosphate uridyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D Y013_24640 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Y013_09515 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D Y013_21645 UDP-glucose/GDP-mannose dehydrogenase K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136] D Y013_11560 sugar kinase K25026 glk; glucokinase [EC:2.7.1.2] D Y013_05890 glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D Y013_01840 polyphosphate glucokinase K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63] D Y013_07220 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Y013_21305 UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Y013_14760 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D Y013_10640 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D Y013_14765 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] D Y013_10645 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] D Y013_01700 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Y013_09385 hypothetical protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Y013_21650 nucleoside-diphosphate sugar epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Y013_17410 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D Y013_21115 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Y013_12040 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Y013_07625 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D Y013_07635 manB; phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D Y013_07955 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D Y013_07675 GDP-mannose pyrophosphorylase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D Y013_22930 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] C 00620 Pyruvate metabolism [PATH:rpy00620] D Y013_01195 AMP-dependent synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Y013_25910 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Y013_18500 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Y013_11835 2-oxoglutarate ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Y013_11830 2-oxoacid ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Y013_06210 pyruvate dehydrogenase E1 K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D Y013_12635 diaminohydroxyphosphoribosylaminopyrimidine deaminase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D Y013_06045 dihydrolipoamide acyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D Y013_13970 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Y013_09850 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Y013_12640 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Y013_12500 acetaldehyde dehydrogenase K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10] D Y013_15610 acetaldehyde dehydrogenase K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10] D Y013_26015 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D Y013_15285 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D Y013_11165 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D Y013_06250 alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D Y013_09745 zinc-binding dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D Y013_14280 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D Y013_10160 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D Y013_14285 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D Y013_10165 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D Y013_05305 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Y013_07495 acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D Y013_07795 biotin carboxyl carrier protein K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D Y013_06235 propionyl-CoA carboxylase subunit beta K18472 accD6; acetyl-CoA/propionyl-CoA carboxylase carboxyl transferase subunit [EC:6.4.1.2 6.4.1.3 2.1.3.15] D Y013_00965 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D Y013_23855 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Y013_24210 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Y013_11580 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Y013_08725 aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-] D Y013_00860 acetyl-CoA hydrolase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18] D Y013_01965 lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D Y013_04360 thiamine pyrophosphate protein K00156 poxB; pyruvate dehydrogenase (quinone) [EC:1.2.5.1] D Y013_23095 thiamine pyrophosphate protein K00156 poxB; pyruvate dehydrogenase (quinone) [EC:1.2.5.1] D Y013_03270 lactate 2-monooxygenase K00467 E1.13.12.4; lactate 2-monooxygenase [EC:1.13.12.4] D Y013_02155 hypothetical protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D Y013_20385 sulfurtransferase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D Y013_23065 malate dehydrogenase K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D Y013_00905 pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1] D Y013_01225 malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4] D Y013_03145 malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4] D Y013_22700 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D Y013_21900 aspartate ammonia-lyase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D Y013_02560 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D Y013_11615 phosphoenolpyruvate carboxykinase K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] D Y013_05160 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D Y013_04480 malate synthase K01638 aceB; malate synthase [EC:2.3.3.9] D Y013_19150 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_19210 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_00075 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_00620 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_13405 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_11485 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_19405 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_24230 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_18180 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_19375 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_21490 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_13675 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D Y013_18330 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:rpy00630] D Y013_09760 isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1] D Y013_01195 AMP-dependent synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Y013_25910 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Y013_18500 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Y013_04480 malate synthase K01638 aceB; malate synthase [EC:2.3.3.9] D Y013_20600 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D Y013_20640 gltA; type II citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D Y013_02720 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D Y013_23605 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D Y013_19150 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_19210 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_00075 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_00620 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_13405 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_11485 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_19405 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_24230 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_18180 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_19375 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_21490 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_00070 glyoxalase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D Y013_11815 citrate lyase K14451 mcl2; (3S)-malyl-CoA thioesterase [EC:3.1.2.30] D Y013_07795 biotin carboxyl carrier protein K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D Y013_07760 methylmalonyl-CoA carboxyltransferase K27094 accD5; propionyl-/long chain acyl-CoA carboxylase carboxyl transferase subunit beta 5 [EC:6.4.1.3 6.4.1.- 2.1.3.15] D Y013_07765 hypothetical protein K27095 accE5; acyl-CoA carboxylase epsilon subunit D Y013_06235 propionyl-CoA carboxylase subunit beta K18472 accD6; acetyl-CoA/propionyl-CoA carboxylase carboxyl transferase subunit [EC:6.4.1.2 6.4.1.3 2.1.3.15] D Y013_02845 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D Y013_02850 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D Y013_07860 FAD-linked oxidase K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14] D Y013_23865 FAD-linked oxidase K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14] D Y013_16760 catalase K03781 katE; catalase [EC:1.11.1.6] D Y013_16810 catalase K03781 katE; catalase [EC:1.11.1.6] D Y013_18380 catalase K03781 katE; catalase [EC:1.11.1.6] D Y013_06175 HAD family hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D Y013_00695 glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Y013_06070 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Y013_06095 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Y013_25885 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Y013_25890 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Y013_21870 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Y013_04495 glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D Y013_06035 glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D Y013_13970 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Y013_09850 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Y013_12640 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Y013_04520 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein D Y013_02475 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D Y013_23275 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D Y013_23750 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D Y013_23100 kgd; alpha-ketoglutarate decarboxylase K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61] D Y013_00380 formate dehydrogenase subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D Y013_00385 dehydrogenase K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D Y013_00375 ferredoxin K00124 fdoH; formate dehydrogenase iron-sulfur subunit D Y013_09560 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D Y013_22020 formamidase K01455 E3.5.1.49; formamidase [EC:3.5.1.49] C 00640 Propanoate metabolism [PATH:rpy00640] D Y013_01195 AMP-dependent synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Y013_25910 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Y013_18500 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Y013_20695 acyl-CoA synthetase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17] D Y013_14280 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D Y013_10160 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D Y013_14285 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D Y013_10165 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D Y013_24380 pyruvate dehydrogenase E1 subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D Y013_24375 2-oxoisovalerate dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D Y013_11450 MFS transporter K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4] D Y013_24370 branched-chain alpha-keto acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D Y013_13970 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Y013_09850 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Y013_12640 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Y013_09325 acyl-CoA oxidase K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6] D Y013_16755 alcohol dehydrogenase K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-] D Y013_24455 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D Y013_06925 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D Y013_18185 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D Y013_07495 acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D Y013_07795 biotin carboxyl carrier protein K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D Y013_06235 propionyl-CoA carboxylase subunit beta K18472 accD6; acetyl-CoA/propionyl-CoA carboxylase carboxyl transferase subunit [EC:6.4.1.2 6.4.1.3 2.1.3.15] D Y013_19050 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D Y013_07760 methylmalonyl-CoA carboxyltransferase K27094 accD5; propionyl-/long chain acyl-CoA carboxylase carboxyl transferase subunit beta 5 [EC:6.4.1.3 6.4.1.- 2.1.3.15] D Y013_07765 hypothetical protein K27095 accE5; acyl-CoA carboxylase epsilon subunit D Y013_00070 glyoxalase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D Y013_02845 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D Y013_02850 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D Y013_21140 succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D Y013_21145 succinyl-CoA synthetase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D Y013_12925 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D Y013_24435 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D Y013_01965 lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] C 00650 Butanoate metabolism [PATH:rpy00650] D Y013_19150 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_19210 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_00075 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_00620 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_13405 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_11485 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_19405 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_24230 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_18180 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_19375 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_21490 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_09755 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D Y013_12180 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D Y013_07145 3-hydroxybutyryl-CoA dehydrogenase K00022 HADH; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D Y013_18185 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D Y013_24455 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D Y013_06925 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D Y013_22450 3-hydroxybutyryl-CoA dehydratase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17] D Y013_12500 acetaldehyde dehydrogenase K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10] D Y013_15610 acetaldehyde dehydrogenase K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10] D Y013_05435 poly-beta-hydroxybutyrate polymerase K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304] D Y013_05445 esterase K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304] D Y013_11870 3-oxoadipate:succinyl-CoA transferase subunit A K01039 gctA; glutaconate CoA-transferase, subunit A [EC:2.8.3.12] D Y013_11875 3-oxoadipate:succinyl-CoA transferase subunit B K01040 gctB; glutaconate CoA-transferase, subunit B [EC:2.8.3.12] D Y013_19070 Asp/Glu/hydantoin racemase K01799 nicE; maleate isomerase [EC:5.2.1.1] D Y013_05560 sdhA; succinate dehydrogenase K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D Y013_08020 succinate dehydrogenase K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D Y013_05555 fumarate reductase K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D Y013_08025 succinate dehydrogenase K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D Y013_08010 succinate dehydrogenase K00241 sdhC; succinate dehydrogenase cytochrome b subunit D Y013_08015 succinate dehydrogenase K00242 sdhD; succinate dehydrogenase membrane anchor subunit D Y013_06815 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D Y013_19050 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D Y013_03120 succinate-semialdehyde dehdyrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D Y013_21120 succinate-semialdehyde dehdyrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D Y013_12775 succinate-semialdehyde dehdyrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D Y013_17010 gabD2; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D Y013_00860 acetyl-CoA hydrolase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18] D Y013_11835 2-oxoglutarate ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Y013_11830 2-oxoacid ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Y013_23280 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D Y013_13385 succinyl-CoA:3-ketoacid-CoA transferase K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5] D Y013_15635 succinyl-CoA:3-ketoacid-CoA transferase K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5] D Y013_13380 succinyl-CoA:3-ketoacid-CoA transferase K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] D Y013_15630 succinyl-CoA:3-ketoacid-CoA transferase K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] D Y013_08695 acetoacetyl-CoA synthetase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16] D Y013_18000 3-hydroxybutyrate dehydrogenase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30] D Y013_23525 alcohol dehydrogenase K18369 adh2; alcohol dehydrogenase [EC:1.1.1.-] D Y013_12765 cyclohexanone monooxygenase K18371 acmA; acetone monooxygenase (methyl acetate-forming) [EC:1.14.13.226] D Y013_12745 1,4-butanediol diacrylate esterase K18372 acmB; methyl acetate hydrolase [EC:3.1.1.114] D Y013_06735 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Y013_06730 acetolactate synthase K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D Y013_12610 dehydrogenase K00004 BDH; (R,R)-butanediol dehydrogenase / meso-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.4 1.1.1.- 1.1.1.303] D Y013_12615 diacetyl reductase K03366 butA; meso-butanediol dehydrogenase / (S,S)-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.- 1.1.1.76 1.1.1.304] C 00660 C5-Branched dibasic acid metabolism [PATH:rpy00660] D Y013_06735 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Y013_06730 acetolactate synthase K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D Y013_11855 CoA transferase K18289 ict-P; itaconate CoA-transferase [EC:2.8.3.- 2.8.3.22] D Y013_21140 succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D Y013_21145 succinyl-CoA synthetase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D Y013_25540 MaoC family dehydratase K18290 ich-Y; itaconyl-CoA hydratase [EC:4.2.1.56] D Y013_06665 isopropylmalate isomerase K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D Y013_06660 isopropylmalate isomerase K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D Y013_06710 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D Y013_05060 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism [PATH:rpy00562] D Y013_01845 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D Y013_05375 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D Y013_16020 inositol-3-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4] D Y013_02050 CDP-alcohol phosphatidyltransferase K27681 pgsA; phosphatidylinositol phosphate synthase [EC:2.7.8.-] D Y013_12925 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D Y013_24435 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D Y013_02550 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:rpy00190] D Y013_05250 NADH dehydrogenase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2] D Y013_05245 NADH dehydrogenase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2] D Y013_05240 NADH dehydrogenase subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2] D Y013_05235 NADH dehydrogenase subunit D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2] D Y013_05230 NADH-quinone oxidoreductase subunit F K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2] D Y013_05225 NADH dehydrogenase subunit G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2] D Y013_05220 NADH:ubiquinone oxidoreductase subunit H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2] D Y013_05215 NADH dehydrogenase subunit I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2] D Y013_05210 NADH:ubiquinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2] D Y013_05205 NADH:ubiquinone oxidoreductase subunit K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2] D Y013_05200 NADH:ubiquinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2] D Y013_05195 NADH:ubiquinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2] D Y013_05190 NADH:ubiquinone oxidoreductase subunit N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2] D Y013_04405 NADH dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] D Y013_13455 pyridine nucleotide-disulfide oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] D Y013_21410 dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] D Y013_05560 sdhA; succinate dehydrogenase K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D Y013_08020 succinate dehydrogenase K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D Y013_05555 fumarate reductase K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D Y013_08025 succinate dehydrogenase K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D Y013_08010 succinate dehydrogenase K00241 sdhC; succinate dehydrogenase cytochrome b subunit D Y013_08015 succinate dehydrogenase K00242 sdhD; succinate dehydrogenase membrane anchor subunit D Y013_05965 menaquinol-cytochrome C reductase iron-sulfur subunit K03890 qcrA; quinol---cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D Y013_05970 menaquinol-cytochrome C reductase cytochrome b subunit K03891 qcrB; quinol---cytochrome-c reductase cytochrome b subunit [EC:7.1.1.8] D Y013_05960 cytochrome C K03889 qcrC; quinol---cytochrome-c reductase cytochrome c subunit [EC:7.1.1.8] D Y013_02630 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D Y013_05985 cytochrome C oxidase subunit IV K27109 ctaF; cytochrome c oxidase subunit IV [EC:7.1.1.9] D Y013_05955 cytochrome B K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9] D Y013_06955 cytochrome C oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9] D Y013_04375 cytochrome C oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9] D Y013_23435 cytochrome C oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9] D Y013_05990 cytochrome C oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9] D Y013_02645 membrane protein K02259 COX15; heme a synthase [EC:1.17.99.9] D Y013_19945 cytochrome BD ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D Y013_19950 cytochrome C oxidase assembly protein K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D Y013_24610 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D Y013_24620 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D Y013_24615 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D Y013_24605 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D Y013_24625 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D Y013_24590 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D Y013_24600 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D Y013_24595 F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D Y013_18660 inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] D Y013_06645 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D Y013_06505 polyphosphate kinase K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation by Calvin cycle [PATH:rpy00710] D Y013_02545 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D Y013_03640 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Y013_02540 gapA; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Y013_14720 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Y013_10600 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Y013_21905 glpX; fructose 1,6-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D Y013_02625 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Y013_00540 ribose 5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D Y013_02550 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D Y013_02490 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D Y013_02620 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D Y013_02560 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] C 00720 Other carbon fixation pathways [PATH:rpy00720] D Y013_05160 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D Y013_02560 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D Y013_00905 pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1] D Y013_22700 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D Y013_21900 aspartate ammonia-lyase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D Y013_05560 sdhA; succinate dehydrogenase K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D Y013_08020 succinate dehydrogenase K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D Y013_05555 fumarate reductase K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D Y013_08025 succinate dehydrogenase K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D Y013_08010 succinate dehydrogenase K00241 sdhC; succinate dehydrogenase cytochrome b subunit D Y013_08015 succinate dehydrogenase K00242 sdhD; succinate dehydrogenase membrane anchor subunit D Y013_21145 succinyl-CoA synthetase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D Y013_21140 succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D Y013_19150 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_19210 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_00075 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_00620 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_13405 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_11485 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_19405 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_24230 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_18180 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_19375 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_21490 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_11835 2-oxoglutarate ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Y013_11830 2-oxoacid ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Y013_03200 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D Y013_08055 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D Y013_02720 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D Y013_23605 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D Y013_07495 acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D Y013_15560 dehydratase K14470 mct; 2-methylfumaryl-CoA isomerase [EC:5.4.1.3] D Y013_00070 glyoxalase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D Y013_02845 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D Y013_02850 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D Y013_25250 5,10-methylene-tetrahydrofolate dehydrogenase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D Y013_08075 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D Y013_05840 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D Y013_14285 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D Y013_10165 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D Y013_14280 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D Y013_10160 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D Y013_01195 AMP-dependent synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Y013_25910 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Y013_18500 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] C 00680 Methane metabolism [PATH:rpy00680] D Y013_08845 alcohol dehydrogenase K17067 mdo; formaldehyde dismutase / methanol dehydrogenase [EC:1.2.98.1 1.1.99.37] D Y013_06250 alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D Y013_00380 formate dehydrogenase subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D Y013_00385 dehydrogenase K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D Y013_00375 ferredoxin K00124 fdoH; formate dehydrogenase iron-sulfur subunit D Y013_21870 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Y013_21695 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Y013_02560 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D Y013_14720 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Y013_10600 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Y013_21905 glpX; fructose 1,6-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D Y013_02480 phosphofructokinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11] D Y013_06770 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D Y013_00300 potassium transporter K18277 tmm; trimethylamine monooxygenase [EC:1.14.13.148] D Y013_17135 amine dehydrogenase K15228 mauA; methylamine dehydrogenase light chain [EC:1.4.9.1] D Y013_00690 glutamine amidotransferase K22081 mgsA; methylamine---glutamate N-methyltransferase subunit A [EC:2.1.1.21] D Y013_00685 protein glxC K22082 mgsB; methylamine---glutamate N-methyltransferase subunit B [EC:2.1.1.21] D Y013_00680 glutamate synthase K22083 mgsC; methylamine---glutamate N-methyltransferase subunit C [EC:2.1.1.21] D Y013_14280 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D Y013_10160 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D Y013_14285 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D Y013_10165 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D Y013_01195 AMP-dependent synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Y013_25910 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Y013_18500 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Y013_05160 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D Y013_09450 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D Y013_06715 3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D Y013_20595 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D Y013_06950 phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D Y013_22630 sulfopyruvate decarboxylase K06034 comD; sulfopyruvate decarboxylase subunit alpha [EC:4.1.1.79] D Y013_22625 thiamine pyrophosphate-binding protein K13039 comE; sulfopyruvate decarboxylase subunit beta [EC:4.1.1.79] D Y013_22830 fbiC; radical SAM protein K11779 fbiC; FO synthase [EC:2.5.1.147 4.3.1.32] D Y013_06640 hypothetical protein K14941 cofC; 2-phospho-L-lactate/phosphoenolpyruvate guanylyltransferase [EC:2.7.7.68 2.7.7.105] D Y013_07655 2-phospho-L-lactate transferase K11212 cofD; LPPG:FO 2-phospho-L-lactate transferase [EC:2.7.8.28] D Y013_07660 F420-0--gamma-glutamyl ligase K24998 fbiB; dehydro coenzyme F420 reductase / coenzyme F420-0:L-glutamate ligase / coenzyme F420-1:gamma-L-glutamate ligase [EC:1.3.8.17 6.3.2.31 6.3.2.34] C 00910 Nitrogen metabolism [PATH:rpy00910] D Y013_22020 formamidase K01455 E3.5.1.49; formamidase [EC:3.5.1.49] D Y013_01355 MFS transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D Y013_07420 major facilitator transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D Y013_01360 narZ; nitrate reductase A subunit alpha K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-] D Y013_01365 narY; nitrate reductase subunit beta K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-] D Y013_01375 nitrate reductase subunit gamma K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-] D Y013_07415 nitrite reductase K00362 nirB; nitrite reductase (NADH) large subunit [EC:1.7.1.15] D Y013_07410 nitrite reductase K00363 nirD; nitrite reductase (NADH) small subunit [EC:1.7.1.15] D Y013_06545 2-nitropropane dioxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16] D Y013_03210 2-nitropropane dioxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16] D Y013_23910 2-nitropropane dioxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16] D Y013_00475 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D Y013_23615 glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D Y013_00410 glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D Y013_00695 glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Y013_06070 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Y013_06095 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Y013_25885 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Y013_25890 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Y013_24205 GltA K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D Y013_16850 glutamate synthase K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D Y013_16855 gltD; dihydropyrimidine dehydrogenase subunit A K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D Y013_18815 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] C 00920 Sulfur metabolism [PATH:rpy00920] D Y013_06530 sulfate ABC transporter substrate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D Y013_06525 sulfate ABC transporter permease K02046 cysU; sulfate/thiosulfate transport system permease protein D Y013_06520 sulfate ABC transporter K02047 cysW; sulfate/thiosulfate transport system permease protein D Y013_06515 sulfate ABC transporter ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D Y013_20455 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D Y013_16790 nitrate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D Y013_20460 nitrate ABC transporter permease K15554 ssuC; sulfonate transport system permease protein D Y013_16780 nitrate ABC transporter permease K15554 ssuC; sulfonate transport system permease protein D Y013_20465 sulfonate ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D Y013_16775 sulfonate ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D Y013_18050 alkanesulfonate monooxygenase K04091 ssuD; alkanesulfonate monooxygenase [EC:1.14.14.5 1.14.14.34] D Y013_04995 oxidoreductase K00299 ssuE; FMN reductase [EC:1.5.1.38] D Y013_24490 adenylylsulfate kinase K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D Y013_06495 sulfate adenylyltransferase K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D Y013_06490 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D Y013_24495 2', 3'-cyclic nucleotide 2'-phosphodiesterase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D Y013_01295 phosphoesterase K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] D Y013_06485 phosphoadenosine phosphosulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10] D Y013_24200 CysJ K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2] D Y013_16395 bifunctional reductase K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2] D Y013_06480 sulfite reductase K00392 sir; sulfite reductase (ferredoxin) [EC:1.8.7.1] D Y013_19985 thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D Y013_18060 thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D Y013_24395 thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D Y013_07780 thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D Y013_24045 thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D Y013_11585 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D Y013_11590 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D Y013_09270 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D Y013_08065 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D Y013_12760 hypothetical protein K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D Y013_21805 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D Y013_14395 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-] D Y013_10275 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:rpy00061] D Y013_07495 acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D Y013_07795 biotin carboxyl carrier protein K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D Y013_06235 propionyl-CoA carboxylase subunit beta K18472 accD6; acetyl-CoA/propionyl-CoA carboxylase carboxyl transferase subunit [EC:6.4.1.2 6.4.1.3 2.1.3.15] D Y013_06225 acyl carrier protein K02078 acpP; acyl carrier protein D Y013_13445 acyl carrier protein K02078 acpP; acyl carrier protein D Y013_06220 malonyl CoA-ACP transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D Y013_00225 3-oxoacyl-ACP synthase K11533 fas; fatty acid synthase, bacteria type [EC:2.3.1.-] D Y013_23360 3-ketoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D Y013_19140 short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Y013_03795 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Y013_25855 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Y013_23365 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Y013_23505 fabG; 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Y013_11490 fabG; 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Y013_25865 oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Y013_15530 3-oxoacyl-ACP synthase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Y013_13325 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Y013_13165 short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Y013_20050 fatty acid desaturase K03921 FAB2; acyl-[acyl-carrier-protein] desaturase [EC:1.14.19.2 1.14.19.11 1.14.19.26] D Y013_07130 acyl-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Y013_03885 acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Y013_24255 acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Y013_23190 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Y013_16980 AMP-dependent synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Y013_15540 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Y013_23155 acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Y013_03250 AMP-dependent synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00062 Fatty acid elongation [PATH:rpy00062] D Y013_07145 3-hydroxybutyryl-CoA dehydrogenase K00022 HADH; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] C 00071 Fatty acid degradation [PATH:rpy00071] D Y013_19150 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_19210 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_00075 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_00620 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_13405 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_11485 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_19405 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_24230 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_18180 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_19375 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_21490 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_15550 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D Y013_17300 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D Y013_18185 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D Y013_07145 3-hydroxybutyryl-CoA dehydrogenase K00022 HADH; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D Y013_24455 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D Y013_06925 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D Y013_09325 acyl-CoA oxidase K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6] D Y013_03900 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D Y013_07275 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D Y013_08955 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D Y013_20300 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D Y013_12395 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D Y013_12935 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D Y013_13175 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D Y013_13440 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D Y013_11905 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D Y013_11925 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D Y013_16035 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D Y013_17320 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D Y013_01615 acyl-CoA dehydrogenase K00255 ACADL; long-chain-acyl-CoA dehydrogenase [EC:1.3.8.8] D Y013_15570 acyl-CoA dehydrogenase K00255 ACADL; long-chain-acyl-CoA dehydrogenase [EC:1.3.8.8] D Y013_13310 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D Y013_07130 acyl-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Y013_03885 acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Y013_24255 acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Y013_23190 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Y013_16980 AMP-dependent synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Y013_15540 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Y013_23155 acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Y013_03250 AMP-dependent synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Y013_07620 alkane 1-monooxygenase K00496 alkB1_2; alkane 1-monooxygenase [EC:1.14.15.3] D Y013_14995 alkane 1-monooxygenase K00496 alkB1_2; alkane 1-monooxygenase [EC:1.14.15.3] D Y013_10875 alkane 1-monooxygenase K00496 alkB1_2; alkane 1-monooxygenase [EC:1.14.15.3] D Y013_00525 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] D Y013_18115 pyridine nucleotide-disulfide oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] D Y013_06250 alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D Y013_26015 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D Y013_15285 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D Y013_11165 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D Y013_23855 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Y013_24210 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Y013_11580 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:rpy00561] D Y013_02475 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D Y013_23275 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D Y013_23750 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D Y013_23855 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Y013_24210 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Y013_11580 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Y013_09745 zinc-binding dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D Y013_07905 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D Y013_04660 HAD family hydrolase K06117 E3.1.3.21; glycerol-1-phosphatase [EC:3.1.3.21] D Y013_20195 glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D Y013_05885 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D Y013_00555 hypothetical protein K00635 tgs; diacylglycerol O-acyltransferase / wax synthase [EC:2.3.1.20 2.3.1.75] D Y013_12095 hypothetical protein K00635 tgs; diacylglycerol O-acyltransferase / wax synthase [EC:2.3.1.20 2.3.1.75] D Y013_01935 diacylglycerol O-acyltransferase K00635 tgs; diacylglycerol O-acyltransferase / wax synthase [EC:2.3.1.20 2.3.1.75] D Y013_16795 diacylglycerol O-acyltransferase K00635 tgs; diacylglycerol O-acyltransferase / wax synthase [EC:2.3.1.20 2.3.1.75] D Y013_05450 wax ester synthase/diacylglycerol acyltransferase K00635 tgs; diacylglycerol O-acyltransferase / wax synthase [EC:2.3.1.20 2.3.1.75] D Y013_07550 diacylglycerol O-acyltransferase K00635 tgs; diacylglycerol O-acyltransferase / wax synthase [EC:2.3.1.20 2.3.1.75] D Y013_05170 wax ester synthase/diacylglycerol acyltransferase K00635 tgs; diacylglycerol O-acyltransferase / wax synthase [EC:2.3.1.20 2.3.1.75] D Y013_20230 mycolyltransferase K18851 fbp; diacylglycerol O-acyltransferase / trehalose O-mycolyltransferase [EC:2.3.1.20 2.3.1.122] D Y013_17435 mycolyltransferase K18851 fbp; diacylglycerol O-acyltransferase / trehalose O-mycolyltransferase [EC:2.3.1.20 2.3.1.122] D Y013_24760 esterase K18851 fbp; diacylglycerol O-acyltransferase / trehalose O-mycolyltransferase [EC:2.3.1.20 2.3.1.122] D Y013_08430 esterase K18851 fbp; diacylglycerol O-acyltransferase / trehalose O-mycolyltransferase [EC:2.3.1.20 2.3.1.122] D Y013_08650 esterase K18851 fbp; diacylglycerol O-acyltransferase / trehalose O-mycolyltransferase [EC:2.3.1.20 2.3.1.122] D Y013_14075 esterase K18851 fbp; diacylglycerol O-acyltransferase / trehalose O-mycolyltransferase [EC:2.3.1.20 2.3.1.122] D Y013_13510 hydrolase K01054 MGLL; acylglycerol lipase [EC:3.1.1.23] C 00564 Glycerophospholipid metabolism [PATH:rpy00564] D Y013_06635 glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D Y013_13635 glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D Y013_07900 glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] D Y013_20195 glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D Y013_05885 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D Y013_17225 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D Y013_13290 ethanolamine ammonia-lyase K03735 eutB; ethanolamine ammonia-lyase large subunit [EC:4.3.1.7] D Y013_13285 ethanolamine ammonia-lyase small subunit K03736 eutC; ethanolamine ammonia-lyase small subunit [EC:4.3.1.7] D Y013_01135 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D Y013_14130 CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D Y013_10010 CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D Y013_14125 phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D Y013_10005 phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D Y013_01460 glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D Y013_04540 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyl-transferase K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41] C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism [PATH:rpy00592] D Y013_09325 acyl-CoA oxidase K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6] D Y013_15550 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D Y013_17300 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 01040 Biosynthesis of unsaturated fatty acids [PATH:rpy01040] D Y013_20050 fatty acid desaturase K03921 FAB2; acyl-[acyl-carrier-protein] desaturase [EC:1.14.19.2 1.14.19.11 1.14.19.26] D Y013_00350 fatty acid desaturase K22769 desA3; NADPH-dependent stearoyl-CoA 9-desaturase [EC:1.14.19.-] D Y013_07530 stearoyl-CoA 9-desaturase K22769 desA3; NADPH-dependent stearoyl-CoA 9-desaturase [EC:1.14.19.-] D Y013_09825 fatty acid desaturase K22769 desA3; NADPH-dependent stearoyl-CoA 9-desaturase [EC:1.14.19.-] D Y013_07535 fatty acid desaturase K22769 desA3; NADPH-dependent stearoyl-CoA 9-desaturase [EC:1.14.19.-] D Y013_13945 fatty acid desaturase K22769 desA3; NADPH-dependent stearoyl-CoA 9-desaturase [EC:1.14.19.-] D Y013_09830 ferredoxin K22770 K22770; stearoyl-CoA 9-desaturase NADPH oxidoreductase D Y013_13950 ferredoxin K22770 K22770; stearoyl-CoA 9-desaturase NADPH oxidoreductase D Y013_07540 stearoyl-CoA 9-desaturase K22770 K22770; stearoyl-CoA 9-desaturase NADPH oxidoreductase D Y013_00345 ferredoxin reductase K22770 K22770; stearoyl-CoA 9-desaturase NADPH oxidoreductase D Y013_09325 acyl-CoA oxidase K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6] D Y013_02085 acyl-CoA thioesterase K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] D Y013_05300 acyl-CoA thioesterase K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:rpy00230] D Y013_07220 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Y013_21590 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D Y013_19910 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D Y013_19645 phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D Y013_21165 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D Y013_19890 phosphoribosylglycinamide synthetase K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3] D Y013_19865 phosphoribosylformylglycinamidine synthase K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3] D Y013_19870 phosphoribosylformylglycinamidine synthase K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D Y013_19915 phosphoribosylaminoimidazole synthetase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D Y013_07730 phosphoribosylaminoimidazole carboxylase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18] D Y013_07725 N5-carboxyaminoimidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D Y013_19805 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D Y013_19670 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D Y013_21170 purH; purine biosynthesis protein purH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D Y013_02135 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D Y013_17750 metallophosphatase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D Y013_03635 5'-3'-deoxyribonucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D Y013_09680 Survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D Y013_03740 HAD family hydrolase K02566 nagD; 5'-nucleotidase [EC:3.1.3.5] D Y013_07950 purine nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1] D Y013_03515 hypothetical protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2] D Y013_05735 laccase K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D Y013_13695 nucleoside hydrolase K01239 E3.2.2.1; purine nucleosidase [EC:3.2.2.1] D Y013_18680 hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D Y013_08240 inosine 5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D Y013_08245 inosine-5`-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D Y013_00785 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D Y013_00155 nucleoside-triphosphate diphosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D Y013_07025 xanthine dehydrogenase K11177 yagR; xanthine dehydrogenase YagR molybdenum-binding subunit [EC:1.17.1.4] D Y013_07030 FAD-binding molybdopterin dehydrogenase K11178 yagS; xanthine dehydrogenase YagS FAD-binding subunit [EC:1.17.1.4] D Y013_07035 (2Fe-2S)-binding protein K13483 yagT; xanthine dehydrogenase YagT iron-sulfur-binding subunit D Y013_08230 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D Y013_02410 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D Y013_10300 Vitamin B12-dependent ribonucleotide reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Y013_06985 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Y013_14420 Vitamin B12-dependent ribonucleotide reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Y013_06980 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D Y013_16615 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D Y013_06345 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1] D Y013_02140 GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D Y013_09430 hypothetical protein K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D Y013_21710 exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D Y013_12245 GTP pyrophosphokinase K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5] D Y013_11665 cyclase K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1] D Y013_12280 cyclase K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1] D Y013_14455 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D Y013_10335 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D Y013_06000 ribokinase K00856 ADK; adenosine kinase [EC:2.7.1.20] D Y013_07995 adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4] D Y013_23165 adenosine deaminase K21053 ade; adenine deaminase [EC:3.5.4.2] D Y013_08485 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D Y013_21630 nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D Y013_23495 3',5'-cyclic-nucleotide phosphodiesterase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53] D Y013_02045 diadenosine polyphosphate hydrolase K19710 E2.7.7.53; ATP adenylyltransferase [EC:2.7.7.53] D Y013_24490 adenylylsulfate kinase K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D Y013_06495 sulfate adenylyltransferase K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D Y013_06490 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D Y013_22670 urate oxidase K00365 uaZ; urate oxidase [EC:1.7.3.3] D Y013_22675 5-hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17] D Y013_22680 OHCU decarboxylase K16840 hpxQ; 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase [EC:4.1.1.97] D Y013_20245 Asp/Glu racemase K16841 hpxA; allantoin racemase [EC:5.1.99.3] D Y013_22555 allantoicase K01466 allB; allantoinase [EC:3.5.2.5] D Y013_22560 allantoicase K01477 alc; allantoicase [EC:3.5.3.4] D Y013_03365 ureC; urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5] D Y013_13880 ureC; urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5] D Y013_03370 urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5] D Y013_03375 ureA; urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5] D Y013_13875 urease subunit beta K14048 ureAB; urease subunit gamma/beta [EC:3.5.1.5] C 00240 Pyrimidine metabolism [PATH:rpy00240] D Y013_02395 carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D Y013_02390 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D Y013_02370 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D Y013_02375 pyrC; dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D Y013_02925 diguanylate cyclase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2] D Y013_14770 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D Y013_10650 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D Y013_02400 orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D Y013_01125 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D Y013_00785 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D Y013_21630 nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D Y013_07770 septum formation protein Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D Y013_04625 CTP synthetase K01937 pyrG; CTP synthase [EC:6.3.4.2] D Y013_04590 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D Y013_17750 metallophosphatase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D Y013_03635 5'-3'-deoxyribonucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D Y013_09680 Survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D Y013_03740 HAD family hydrolase K02566 nagD; 5'-nucleotidase [EC:3.1.3.5] D Y013_03515 hypothetical protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2] D Y013_07965 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D Y013_02365 uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D Y013_24160 pseudouridine-5'-phosphate glycosidase K16329 psuG; pseudouridylate synthase [EC:4.2.1.70] D Y013_08005 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5] D Y013_11335 deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D Y013_15455 deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D Y013_10300 Vitamin B12-dependent ribonucleotide reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Y013_06985 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Y013_14420 Vitamin B12-dependent ribonucleotide reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Y013_06980 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D Y013_16615 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D Y013_07595 thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D Y013_01865 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D Y013_08000 pyrimidine-nucleoside phosphorylase K00758 deoA; thymidine phosphorylase [EC:2.4.2.4] D Y013_21075 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D Y013_01420 thyX; FAD-dependent thymidylate synthase K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] D Y013_00675 allantoate amidohydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:rpy00250] D Y013_05460 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D Y013_05995 asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D Y013_15005 aminotransferase AlaT K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D Y013_10885 aminotransferase AlaT K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D Y013_04715 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D Y013_04710 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D Y013_14455 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D Y013_10335 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D Y013_19670 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D Y013_02370 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D Y013_06815 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D Y013_19050 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D Y013_03120 succinate-semialdehyde dehdyrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D Y013_21120 succinate-semialdehyde dehdyrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D Y013_12775 succinate-semialdehyde dehdyrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D Y013_17010 gabD2; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D Y013_24205 GltA K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D Y013_16850 glutamate synthase K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D Y013_16855 gltD; dihydropyrimidine dehydrogenase subunit A K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D Y013_00475 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D Y013_23615 glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D Y013_00410 glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D Y013_25120 1-pyrroline-5-carboxylate dehydrogenase K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88] D Y013_11400 1-pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D Y013_15520 hypothetical protein K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D Y013_00695 glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Y013_06070 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Y013_06095 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Y013_25885 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Y013_25890 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Y013_02395 carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D Y013_02390 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D Y013_25845 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D Y013_15815 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D Y013_19870 phosphoribosylformylglycinamidine synthase K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D Y013_08325 glutamine amidotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Y013_19910 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:rpy00260] D Y013_18340 aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Y013_18345 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Y013_24535 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D Y013_24545 homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39] D Y013_24540 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D Y013_21870 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Y013_02475 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D Y013_23275 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D Y013_23750 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D Y013_09450 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D Y013_06715 3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D Y013_20595 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D Y013_06950 phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D Y013_04495 glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D Y013_06035 glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D Y013_13970 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Y013_09850 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Y013_12640 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Y013_04520 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein D Y013_14130 CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D Y013_10010 CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D Y013_14350 sarcosine oxidase K00301 E1.5.3.1; sarcosine oxidase [EC:1.5.3.1] D Y013_10230 sarcosine oxidase K00301 E1.5.3.1; sarcosine oxidase [EC:1.5.3.1] D Y013_21800 cystathionine beta-synthase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22] D Y013_06630 cystathionine gamma-lyase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1] D Y013_05650 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D Y013_05320 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D Y013_05325 tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D Y013_23200 tryptophan synthase subunit beta K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D Y013_00840 diadenosine tetraphosphatase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76] D Y013_00845 2,4-diaminobutyric acid acetyltransferase K06718 ectA; L-2,4-diaminobutyric acid acetyltransferase [EC:2.3.1.178] D Y013_00835 ectC; ectoine synthase K06720 ectC; L-ectoine synthase [EC:4.2.1.108] D Y013_20325 multidrug DMT transporter permease K10674 ectD; ectoine hydroxylase [EC:1.14.11.55] C 00270 Cysteine and methionine metabolism [PATH:rpy00270] D Y013_11585 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D Y013_11590 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D Y013_09270 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D Y013_06630 cystathionine gamma-lyase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1] D Y013_15385 aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D Y013_11265 aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D Y013_21800 cystathionine beta-synthase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22] D Y013_04025 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D Y013_09750 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D Y013_14555 methionine synthase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D Y013_10435 methionine synthase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D Y013_02425 S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D Y013_07060 nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9] D Y013_05735 laccase K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D Y013_17805 DNA methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Y013_07600 S-adenosyl-L-homocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D Y013_18340 aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Y013_18345 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Y013_24535 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D Y013_08065 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D Y013_12760 hypothetical protein K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D Y013_21805 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D Y013_12300 O-acetylhomoserine aminocarboxypropyltransferase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] D Y013_14395 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-] D Y013_10275 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-] D Y013_06030 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Y013_21550 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D Y013_19985 thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D Y013_18060 thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D Y013_24395 thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D Y013_07780 thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D Y013_24045 thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D Y013_01965 lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D Y013_06715 3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D Y013_20595 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00280 Valine, leucine and isoleucine degradation [PATH:rpy00280] D Y013_06030 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Y013_15265 Valine dehydrogenase K00271 vdh; valine dehydrogenase (NAD+) [EC:1.4.1.23] D Y013_11145 Valine dehydrogenase K00271 vdh; valine dehydrogenase (NAD+) [EC:1.4.1.23] D Y013_24380 pyruvate dehydrogenase E1 subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D Y013_24375 2-oxoisovalerate dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D Y013_11450 MFS transporter K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4] D Y013_24370 branched-chain alpha-keto acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D Y013_13970 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Y013_09850 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Y013_12640 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Y013_03900 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D Y013_07275 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D Y013_08955 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D Y013_20300 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D Y013_12395 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D Y013_12935 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D Y013_13175 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D Y013_13440 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D Y013_11905 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D Y013_11925 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D Y013_16035 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D Y013_17320 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D Y013_15655 acyl-CoA dehydrogenase K11410 acdH; short-chain 2-methylacyl-CoA dehydrogenase [EC:1.3.8.5] D Y013_24455 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D Y013_06925 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D Y013_18185 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D Y013_07145 3-hydroxybutyryl-CoA dehydrogenase K00022 HADH; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D Y013_15550 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D Y013_17300 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D Y013_07795 biotin carboxyl carrier protein K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D Y013_07760 methylmalonyl-CoA carboxyltransferase K27094 accD5; propionyl-/long chain acyl-CoA carboxylase carboxyl transferase subunit beta 5 [EC:6.4.1.3 6.4.1.- 2.1.3.15] D Y013_07765 hypothetical protein K27095 accE5; acyl-CoA carboxylase epsilon subunit D Y013_06235 propionyl-CoA carboxylase subunit beta K18472 accD6; acetyl-CoA/propionyl-CoA carboxylase carboxyl transferase subunit [EC:6.4.1.2 6.4.1.3 2.1.3.15] D Y013_00070 glyoxalase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D Y013_02845 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D Y013_02850 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D Y013_24450 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] D Y013_12925 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D Y013_24435 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D Y013_23855 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Y013_24210 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Y013_11580 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Y013_15660 biotin carboxyl carrier protein K01968 MCCC1; 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4] D Y013_15665 acetyl-CoA carboxylase subunit beta K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4] D Y013_23280 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D Y013_13385 succinyl-CoA:3-ketoacid-CoA transferase K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5] D Y013_15635 succinyl-CoA:3-ketoacid-CoA transferase K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5] D Y013_13380 succinyl-CoA:3-ketoacid-CoA transferase K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] D Y013_15630 succinyl-CoA:3-ketoacid-CoA transferase K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] D Y013_08695 acetoacetyl-CoA synthetase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16] D Y013_19150 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_19210 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_00075 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_00620 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_13405 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_11485 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_19405 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_24230 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_18180 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_19375 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_21490 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:rpy00290] D Y013_05650 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D Y013_06665 isopropylmalate isomerase K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D Y013_06660 isopropylmalate isomerase K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D Y013_06710 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D Y013_05060 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D Y013_06735 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Y013_06730 acetolactate synthase K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D Y013_06725 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D Y013_06745 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D Y013_12265 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D Y013_06030 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Y013_15005 aminotransferase AlaT K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D Y013_10885 aminotransferase AlaT K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D Y013_13675 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D Y013_18330 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:rpy00300] D Y013_24535 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D Y013_18340 aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Y013_18345 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Y013_01425 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D Y013_01395 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D Y013_22870 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117] D Y013_04730 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D Y013_20335 aminotransferase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17] D Y013_22875 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D Y013_01570 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D Y013_24530 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D Y013_05780 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D Y013_03000 UDP-N-acetylmuramyl peptide synthase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D Y013_05775 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:rpy00310] D Y013_07850 aldehyde dehydrogenase K26061 amaB; L-aminoadipate-semialdehyde dehydrogenase D Y013_13970 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Y013_09850 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Y013_12640 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Y013_13310 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D Y013_24455 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D Y013_06925 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D Y013_18185 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D Y013_07145 3-hydroxybutyryl-CoA dehydrogenase K00022 HADH; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D Y013_19150 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_19210 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_00075 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_00620 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_13405 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_11485 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_19405 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_24230 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_18180 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_19375 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_21490 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_03120 succinate-semialdehyde dehdyrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D Y013_21120 succinate-semialdehyde dehdyrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D Y013_12775 succinate-semialdehyde dehdyrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D Y013_17010 gabD2; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D Y013_23855 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Y013_24210 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Y013_11580 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00220 Arginine biosynthesis [PATH:rpy00220] D Y013_04725 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D Y013_04715 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D Y013_04710 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D Y013_23460 urea amidolyase K01941 uca; urea carboxylase [EC:6.3.4.6] D Y013_09820 allophanate hydrolase K01457 atzF; allophanate hydrolase [EC:3.5.1.54] D Y013_13940 allophanate hydrolase K01457 atzF; allophanate hydrolase [EC:3.5.1.54] D Y013_03365 ureC; urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5] D Y013_13880 ureC; urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5] D Y013_03370 urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5] D Y013_03375 ureA; urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5] D Y013_13875 urease subunit beta K14048 ureAB; urease subunit gamma/beta [EC:3.5.1.5] D Y013_21345 arginine deiminase K01478 arcA; arginine deiminase [EC:3.5.3.6] D Y013_25845 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D Y013_15815 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D Y013_19870 phosphoribosylformylglycinamidine synthase K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D Y013_00695 glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Y013_06070 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Y013_06095 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Y013_25885 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Y013_25890 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Y013_02395 carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D Y013_02390 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D Y013_00475 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D Y013_23615 glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D Y013_00410 glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D Y013_15005 aminotransferase AlaT K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D Y013_10885 aminotransferase AlaT K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D Y013_01455 N-acetylglutamate synthase K00619 argA; amino-acid N-acetyltransferase [EC:2.3.1.1] D Y013_04740 N-acetylglutamate synthase K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] D Y013_14200 acetyltransferase K22476 K22476; N-acetylglutamate synthase [EC:2.3.1.1] D Y013_10080 acetyltransferase K22476 K22476; N-acetylglutamate synthase [EC:2.3.1.1] D Y013_04735 acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D Y013_04745 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D Y013_04730 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] C 00330 Arginine and proline metabolism [PATH:rpy00330] D Y013_12420 5-oxoprolinase K01473 hyuA; N-methylhydantoinase A [EC:3.5.2.14] D Y013_25555 N-methylhydantoinase K01474 hyuB; N-methylhydantoinase B [EC:3.5.2.14] D Y013_12415 hydantoinase K01474 hyuB; N-methylhydantoinase B [EC:3.5.2.14] D Y013_01645 adenosylmethionine-8-amino-7-oxononanoate aminotransferase K12256 spuC; putrescine---pyruvate transaminase [EC:2.6.1.113] D Y013_23855 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Y013_24210 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Y013_11580 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Y013_06400 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D Y013_25765 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D Y013_12460 glutamyl-tRNA amidotransferase subunit A K01426 E3.5.1.4; amidase [EC:3.5.1.4] D Y013_00710 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D Y013_06900 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D Y013_09400 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D Y013_25125 proline dehydrogenase K00318 PRODH; proline dehydrogenase [EC:1.5.5.2] D Y013_11400 1-pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D Y013_15520 hypothetical protein K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D Y013_25120 1-pyrroline-5-carboxylate dehydrogenase K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88] D Y013_00810 gamma-glutamyl kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D Y013_06620 gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] D Y013_06115 proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5] D Y013_24955 proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5] D Y013_26050 proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5] C 00340 Histidine metabolism [PATH:rpy00340] D Y013_04050 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D Y013_04045 hisE; phosphoribosyl-ATP pyrophosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31] D Y013_05365 phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19] D Y013_05380 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase K24017 priA; phosphoribosyl isomerase A [EC:5.3.1.16 5.3.1.24] D Y013_05400 imidazole glycerol phosphate synthase K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D Y013_05370 imidazole glycerol phosphate synthase K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D Y013_05415 imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] D Y013_05420 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Y013_17755 aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Y013_07260 histidinol-phosphatase K05602 hisN; histidinol-phosphatase [EC:3.1.3.15] D Y013_25275 hypothetical protein K04486 E3.1.3.15B; histidinol-phosphatase (PHP family) [EC:3.1.3.15] D Y013_05425 histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] D Y013_23855 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Y013_24210 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Y013_11580 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Y013_21565 histidyl-tRNA synthetase K18911 egtD; L-histidine Nalpha-methyltransferase [EC:2.1.1.44] D Y013_21555 sulfatase modifying factor K18912 egtB; gamma-glutamyl hercynylcysteine S-oxide synthase [EC:1.14.99.50] D Y013_21560 hypothetical protein K07008 egtC; gamma-glutamyl hercynylcysteine S-oxide hydrolase [EC:3.5.1.118] C 00350 Tyrosine metabolism [PATH:rpy00350] D Y013_05420 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Y013_17755 aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Y013_13200 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D Y013_13090 homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5] D Y013_13080 fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2] D Y013_25440 betaine-aldehyde dehydrogenase K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39] D Y013_22610 betaine-aldehyde dehydrogenase K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39] D Y013_06250 alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D Y013_26015 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D Y013_15285 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D Y013_11165 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D Y013_13560 Pyoverdin chromophore biosynthetic protein pvcC K00483 hpaB; 4-hydroxyphenylacetate 3-monooxygenase [EC:1.14.14.9] D Y013_12530 Pyoverdin chromophore biosynthetic protein pvcC K00483 hpaB; 4-hydroxyphenylacetate 3-monooxygenase [EC:1.14.14.9] D Y013_03120 succinate-semialdehyde dehdyrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D Y013_21120 succinate-semialdehyde dehdyrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D Y013_12775 succinate-semialdehyde dehdyrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D Y013_17010 gabD2; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00360 Phenylalanine metabolism [PATH:rpy00360] D Y013_25440 betaine-aldehyde dehydrogenase K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39] D Y013_22610 betaine-aldehyde dehydrogenase K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39] D Y013_00885 enoyl-CoA hydratase K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18] D Y013_24455 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D Y013_06925 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D Y013_09755 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D Y013_12180 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D Y013_05420 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Y013_17755 aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Y013_13200 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D Y013_14100 D-amino acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] D Y013_09980 D-amino acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] D Y013_06080 catalase/hydroperoxidase HPI(I) K03782 katG; catalase-peroxidase [EC:1.11.1.21] D Y013_06400 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D Y013_25765 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D Y013_12460 glutamyl-tRNA amidotransferase subunit A K01426 E3.5.1.4; amidase [EC:3.5.1.4] D Y013_00710 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D Y013_06900 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D Y013_18105 (2Fe-2S)-binding protein K05710 hcaC; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin component D Y013_00525 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] D Y013_18115 pyridine nucleotide-disulfide oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] D Y013_22370 3-carboxyethylcatechol 2,3-dioxygenase K05713 mhpB; 2,3-dihydroxyphenylpropionate 1,2-dioxygenase [EC:1.13.11.16] D Y013_12695 mhpB; 3-(2,3-dihydroxyphenyl)propionate dioxygenase K05713 mhpB; 2,3-dihydroxyphenylpropionate 1,2-dioxygenase [EC:1.13.11.16] D Y013_12690 2-hydroxy-6-ketonona-2,4-dienedoic acid hydrolase K05714 mhpC; 2-hydroxy-6-oxonona-2,4-dienedioate hydrolase [EC:3.7.1.14] D Y013_22375 alpha/beta hydrolase K05714 mhpC; 2-hydroxy-6-oxonona-2,4-dienedioate hydrolase [EC:3.7.1.14] D Y013_15615 2-keto-4-pentenoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80] D Y013_12565 2-keto-4-pentenoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80] D Y013_12505 4-hyroxy-2-oxovalerate aldolase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39] D Y013_15605 4-hyroxy-2-oxovalerate aldolase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39] D Y013_12500 acetaldehyde dehydrogenase K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10] D Y013_15610 acetaldehyde dehydrogenase K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10] C 00380 Tryptophan metabolism [PATH:rpy00380] D Y013_12510 2-hydroxymuconic semialdehyde dehydrogenase K10217 dmpC; aminomuconate-semialdehyde/2-hydroxymuconate-6-semialdehyde dehydrogenase [EC:1.2.1.32 1.2.1.85] D Y013_13970 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Y013_09850 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Y013_12640 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Y013_13310 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D Y013_24455 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D Y013_06925 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D Y013_18185 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D Y013_07145 3-hydroxybutyryl-CoA dehydrogenase K00022 HADH; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D Y013_19150 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_19210 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_00075 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_00620 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_13405 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_11485 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_19405 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_24230 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_18180 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_19375 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_21490 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_23855 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Y013_24210 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Y013_11580 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Y013_06400 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D Y013_25765 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D Y013_12460 glutamyl-tRNA amidotransferase subunit A K01426 E3.5.1.4; amidase [EC:3.5.1.4] D Y013_00710 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D Y013_06900 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D Y013_16760 catalase K03781 katE; catalase [EC:1.11.1.6] D Y013_16810 catalase K03781 katE; catalase [EC:1.11.1.6] D Y013_18380 catalase K03781 katE; catalase [EC:1.11.1.6] D Y013_06080 catalase/hydroperoxidase HPI(I) K03782 katG; catalase-peroxidase [EC:1.11.1.21] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:rpy00400] D Y013_05875 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D Y013_20315 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D Y013_02335 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D Y013_11425 3-dehydroquinate dehydratase K03785 aroD; 3-dehydroquinate dehydratase I [EC:4.2.1.10] D Y013_14035 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D Y013_09915 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D Y013_14045 sugar phosphate isomerase K26400 quiC1; 3-dehydroshikimate dehydratase [EC:4.2.1.118] D Y013_09925 sugar phosphate isomerase K26400 quiC1; 3-dehydroshikimate dehydratase [EC:4.2.1.118] D Y013_14040 shikimate 5-dehydrogenase K25901 qsuD; quinate/shikimate dehydrogenase (NAD+) [EC:1.1.1.24] D Y013_09920 shikimate 5-dehydrogenase K25901 qsuD; quinate/shikimate dehydrogenase (NAD+) [EC:1.1.1.24] D Y013_02330 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D Y013_07520 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D Y013_02325 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D Y013_05340 anthranilate synthase subunit I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D Y013_05945 anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D Y013_15880 phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24] D Y013_05380 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase K24017 priA; phosphoribosyl isomerase A [EC:5.3.1.16 5.3.1.24] D Y013_05330 indole-3-glycerol-phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48] D Y013_05320 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D Y013_05325 tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D Y013_23200 tryptophan synthase subunit beta K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D Y013_21125 chorismate mutase K04093 pheA1; chorismate mutase [EC:5.4.99.5] D Y013_24220 chorismate mutase K04093 pheA1; chorismate mutase [EC:5.4.99.5] D Y013_17845 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D Y013_17265 prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51] D Y013_05420 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Y013_17755 aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:rpy00410] D Y013_18730 aspartate decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D Y013_06815 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D Y013_19050 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D Y013_23855 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Y013_24210 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Y013_11580 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Y013_18725 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D Y013_00675 allantoate amidohydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] D Y013_24455 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D Y013_06925 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D Y013_18185 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D Y013_09325 acyl-CoA oxidase K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6] D Y013_12925 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D Y013_24435 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] C 00430 Taurine and hypotaurine metabolism [PATH:rpy00430] D Y013_06815 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D Y013_08825 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D Y013_18100 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D Y013_00475 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D Y013_14285 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D Y013_10165 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D Y013_14280 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D Y013_10160 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] C 00440 Phosphonate and phosphinate metabolism C 00450 Selenocompound metabolism [PATH:rpy00450] D Y013_21805 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D Y013_15385 aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D Y013_11265 aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D Y013_04025 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D Y013_09750 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D Y013_14555 methionine synthase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D Y013_10435 methionine synthase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D Y013_06630 cystathionine gamma-lyase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1] D Y013_02685 cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D Y013_21545 aminotransferase class V K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D Y013_16440 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D Y013_22650 aldehyde oxidase K12528 xdhD; putative selenate reductase molybdopterin-binding subunit D Y013_24490 adenylylsulfate kinase K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D Y013_06495 sulfate adenylyltransferase K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D Y013_06490 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D Y013_00390 segregation protein A K01008 selD; selenide, water dikinase [EC:2.7.9.3] D Y013_00400 selenocysteine synthase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] D Y013_21420 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:rpy00460] D Y013_23530 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Y013_08825 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D Y013_18100 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D Y013_21870 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Y013_22020 formamidase K01455 E3.5.1.49; formamidase [EC:3.5.1.49] C 00470 D-Amino acid metabolism [PATH:rpy00470] D Y013_08315 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D Y013_06625 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Y013_25845 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D Y013_15815 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D Y013_19870 phosphoribosylformylglycinamidine synthase K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D Y013_08860 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D Y013_05765 murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D Y013_01570 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D Y013_24530 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D Y013_14100 D-amino acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] D Y013_09980 D-amino acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] C 00480 Glutathione metabolism [PATH:rpy00480] D Y013_08825 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D Y013_18100 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D Y013_18895 hypothetical protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9] D Y013_00570 carboxylate-amine ligase K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-] D Y013_03595 carboxylate-amine ligase K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-] D Y013_14175 carboxylate-amine ligase K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-] D Y013_10055 carboxylate-amine ligase K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-] D Y013_21550 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D Y013_06040 aminopeptidase A K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D Y013_00520 aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D Y013_03955 aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D Y013_22635 hypothetical protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D Y013_03200 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D Y013_08055 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D Y013_04450 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D Y013_02615 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D Y013_19830 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis [PATH:rpy00515] D Y013_21380 hypothetical protein K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109] C 00514 Other types of O-glycan biosynthesis [PATH:rpy00514] D Y013_21380 hypothetical protein K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109] C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation D Y013_13425 O-glycosyl hydrolase K01192 E3.2.1.25; beta-mannosidase [EC:3.2.1.25] C 00540 Lipopolysaccharide biosynthesis C 00542 O-Antigen repeat unit biosynthesis [PATH:rpy00542] D Y013_24580 UDP-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:rpy00541] D Y013_21305 UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Y013_01700 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Y013_09385 hypothetical protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Y013_21650 nucleoside-diphosphate sugar epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Y013_17410 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D Y013_17575 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D Y013_15075 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D Y013_10955 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D Y013_17580 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D Y013_15080 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D Y013_10960 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D Y013_17570 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D Y013_15070 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D Y013_10950 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D Y013_07685 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D Y013_07625 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D Y013_07635 manB; phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D Y013_07955 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D Y013_21595 glmU; N-acetylglucosamine-1-phosphate uridyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D Y013_21645 UDP-glucose/GDP-mannose dehydrogenase K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136] C 00550 Peptidoglycan biosynthesis [PATH:rpy00550] D Y013_24640 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Y013_09515 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D Y013_05750 UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D Y013_05765 murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D Y013_05780 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D Y013_03000 UDP-N-acetylmuramyl peptide synthase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D Y013_06625 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Y013_05775 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D Y013_06390 UDP pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D Y013_02965 UDP pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D Y013_05770 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D Y013_05755 UDP-diphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D Y013_14480 hypothetical protein K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D Y013_10360 hypothetical protein K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D Y013_05785 cell division protein FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D Y013_16680 penicillin-binding protein A K05364 pbpA; penicillin-binding protein A D Y013_18665 D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D Y013_18310 UDP-N-acetylmuramyl peptide synthase K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13] D Y013_18305 glutamine amidotransferase K07009 gatD; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13] C 00552 Teichoic acid biosynthesis [PATH:rpy00552] D Y013_02965 UDP pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D Y013_24580 UDP-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:rpy00543] D Y013_24580 UDP-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D Y013_21640 glycosyl transferase K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-] D Y013_11585 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:rpy00730] D Y013_12850 phosphomethylpyrimidine synthase K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17] D Y013_14215 phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D Y013_10095 phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D Y013_06855 cysteine desulfarase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Y013_14250 glycine oxidase K03153 thiO; glycine oxidase [EC:1.4.3.19] D Y013_10130 glycine oxidase K03153 thiO; glycine oxidase [EC:1.4.3.19] D Y013_01920 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D Y013_14240 thiG; thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10] D Y013_10120 thiG; thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10] D Y013_18055 hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50] D Y013_14255 thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D Y013_10135 thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D Y013_00870 thiamine monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16] D Y013_03280 GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D Y013_07525 GTPase EngC K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D Y013_08485 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:rpy00740] D Y013_02505 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D Y013_02495 5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D Y013_04000 riboflavin synthase subunit beta K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D Y013_02510 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D Y013_02500 riboflavin synthase subunit alpha K00793 ribE; riboflavin synthase [EC:2.5.1.9] D Y013_01340 riboflavin kinase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D Y013_04995 oxidoreductase K00299 ssuE; FMN reductase [EC:1.5.1.38] D Y013_19835 cob(II)yrinic acid a,c-diamide reductase K04719 bluB; 5,6-dimethylbenzimidazole synthase [EC:1.13.11.79] D Y013_18055 hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50] C 00750 Vitamin B6 metabolism [PATH:rpy00750] D Y013_20605 pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5] D Y013_21510 pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5] D Y013_00755 phosphomethylpyrimidine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35] D Y013_20595 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D Y013_24540 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D Y013_02070 pyridoxal biosynthesis lyase K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6] D Y013_02090 glutamine amidotransferase K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6] C 00760 Nicotinate and nicotinamide metabolism [PATH:rpy00760] D Y013_05460 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D Y013_15090 aspartate dehydrogenase K06989 nadX; aspartate dehydrogenase [EC:1.4.1.21] D Y013_10970 aspartate dehydrogenase K06989 nadX; aspartate dehydrogenase [EC:1.4.1.21] D Y013_05465 quinolinate synthetase K03517 nadA; quinolinate synthase [EC:2.5.1.72] D Y013_05455 nicotinate-nucleotide pyrophosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] D Y013_00120 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D Y013_07950 purine nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1] D Y013_24055 cytidylyltransferase K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22] D Y013_17750 metallophosphatase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D Y013_03635 5'-3'-deoxyribonucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D Y013_09680 Survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D Y013_03740 HAD family hydrolase K02566 nagD; 5'-nucleotidase [EC:3.1.3.5] D Y013_06605 nicotinic acid mononucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D Y013_21630 nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D Y013_07340 NADH pyrophosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22] D Y013_12995 NADH pyrophosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22] D Y013_07070 nadE; NAD synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5] D Y013_20665 competence protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42] D Y013_00115 amidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-] D Y013_24340 NAD-dependent deacetylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313] D Y013_04645 ppnK; inorganic polyphosphate/ATP-NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] D Y013_23710 NAD(P) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D Y013_23720 NAD(P) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D Y013_24350 NAD(P) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D Y013_24355 NAD(P) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D Y013_23725 NAD(P) transhydrogenase subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1] D Y013_24360 NAD(P) transhydrogenase subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1] D Y013_19070 Asp/Glu/hydantoin racemase K01799 nicE; maleate isomerase [EC:5.2.1.1] D Y013_03120 succinate-semialdehyde dehdyrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D Y013_21120 succinate-semialdehyde dehdyrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D Y013_12775 succinate-semialdehyde dehdyrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D Y013_17010 gabD2; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00770 Pantothenate and CoA biosynthesis [PATH:rpy00770] D Y013_06735 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Y013_06730 acetolactate synthase K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D Y013_06725 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D Y013_06745 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D Y013_12265 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D Y013_06105 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D Y013_18725 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D Y013_21860 pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33] D Y013_18735 pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33] D Y013_02420 phosphopantothenate synthase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D Y013_21630 nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D Y013_00915 coaD; phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D Y013_05005 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D Y013_00230 4'-phosphopantetheinyl transferase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D Y013_13450 ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D Y013_06030 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Y013_00675 allantoate amidohydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] D Y013_18730 aspartate decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D Y013_23855 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Y013_24210 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Y013_11580 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00780 Biotin metabolism [PATH:rpy00780] D Y013_19140 short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Y013_03795 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Y013_25855 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Y013_23365 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Y013_23505 fabG; 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Y013_11490 fabG; 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Y013_25865 oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Y013_15530 3-oxoacyl-ACP synthase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Y013_13325 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Y013_13165 short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Y013_05580 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D Y013_05590 adenosylmethionine--8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D Y013_05575 dithiobiotin synthetase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3] D Y013_05510 biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6] D Y013_07755 biotin--acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D Y013_01960 biotin transporter BioY K08351 bisC; biotin/methionine sulfoxide reductase [EC:1.-.-.-] C 00785 Lipoic acid metabolism [PATH:rpy00785] D Y013_06050 lipoate-protein ligase B K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181] D Y013_06055 radical SAM protein K03644 lipA; lipoyl synthase [EC:2.8.1.8] D Y013_12645 radical SAM protein K03644 lipA; lipoyl synthase [EC:2.8.1.8] D Y013_13970 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Y013_09850 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Y013_12640 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Y013_06210 pyruvate dehydrogenase E1 K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D Y013_12635 diaminohydroxyphosphoribosylaminopyrimidine deaminase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D Y013_06045 dihydrolipoamide acyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D Y013_23100 kgd; alpha-ketoglutarate decarboxylase K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61] D Y013_24380 pyruvate dehydrogenase E1 subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D Y013_24375 2-oxoisovalerate dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D Y013_11450 MFS transporter K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4] D Y013_24370 branched-chain alpha-keto acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D Y013_04495 glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D Y013_06035 glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D Y013_04520 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:rpy00790] D Y013_18690 GTP cyclohydrolase K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16] D Y013_02270 alkaline phosphatase K01113 phoD; alkaline phosphatase D [EC:3.1.3.1] D Y013_02995 alkaline phosphatase K01113 phoD; alkaline phosphatase D [EC:3.1.3.1] D Y013_14450 alkaline phosphatase K01113 phoD; alkaline phosphatase D [EC:3.1.3.1] D Y013_10330 alkaline phosphatase K01113 phoD; alkaline phosphatase D [EC:3.1.3.1] D Y013_18700 dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D Y013_18705 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D Y013_22895 Inactive dihydropteroate synthase 2 K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D Y013_18695 dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D Y013_21080 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D Y013_00775 dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D Y013_02505 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D Y013_16665 anthranilate synthase K01664 pabA; para-aminobenzoate synthetase component II [EC:2.6.1.85] D Y013_21400 aminodeoxychorismate synthase K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85] D Y013_04235 para-aminobenzoate synthase K13950 pabAB; para-aminobenzoate synthetase [EC:2.6.1.85] D Y013_19940 4-amino-4-deoxychorismate lyase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38] D Y013_22770 pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D Y013_07080 molybdenum cofactor biosynthesis protein MoeA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D Y013_07090 molybdopterin-guanine dinucleotide biosynthesis protein MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D Y013_07095 molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D Y013_07085 molybdenum cofactor biosynthesis protein MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D Y013_21310 molybdopterin molybdenumtransferase K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D Y013_07395 molybdopterin biosynthesis protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] C 00670 One carbon pool by folate [PATH:rpy00670] D Y013_21080 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D Y013_25250 5,10-methylene-tetrahydrofolate dehydrogenase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D Y013_08075 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D Y013_21870 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Y013_21165 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D Y013_21170 purH; purine biosynthesis protein purH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D Y013_02445 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D Y013_06035 glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D Y013_04025 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D Y013_21075 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D Y013_01420 thyX; FAD-dependent thymidylate synthase K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] D Y013_09560 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D Y013_05840 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D Y013_21300 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:rpy00860] D Y013_06695 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Y013_17985 glutamyl-Q tRNA(Asp) ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Y013_09360 glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70] D Y013_09320 glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D Y013_09345 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D Y013_09355 porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D Y013_07405 uroporphyrinogen III synthetase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75] D Y013_01945 uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] D Y013_05150 hypothetical protein K00230 hemG; menaquinone-dependent protoporphyrinogen oxidase [EC:1.3.5.3] D Y013_20215 protoporphyrinogen oxidase K00230 hemG; menaquinone-dependent protoporphyrinogen oxidase [EC:1.3.5.3] D Y013_01950 protoporphyrinogen oxidase K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15] D Y013_02760 ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] D Y013_01955 hypothetical protein K00435 hemQ; hydrogen peroxide-dependent heme synthase [EC:1.3.98.5] D Y013_09350 uroporphyrin-III C-methyltransferase K13542 cobA-hemD; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75] D Y013_01230 multifunctional uroporphyrinogen III methylase/precorrin-2 oxidase/ferrochelatase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4] D Y013_02630 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D Y013_02645 membrane protein K02259 COX15; heme a synthase [EC:1.17.99.9] D Y013_14625 precorrin-3B C17-methyltransferase K13540 cobIJ; precorrin-2 C20-methyltransferase / precorrin-3B C17-methyltransferase [EC:2.1.1.130 2.1.1.131] D Y013_10505 precorrin-3B C17-methyltransferase K13540 cobIJ; precorrin-2 C20-methyltransferase / precorrin-3B C17-methyltransferase [EC:2.1.1.130 2.1.1.131] D Y013_04170 precorrin-3B synthase K02229 cobG; precorrin-3B synthase [EC:1.14.13.83] D Y013_14615 precorrin-3B synthase K02229 cobG; precorrin-3B synthase [EC:1.14.13.83] D Y013_10495 precorrin-3B synthase K02229 cobG; precorrin-3B synthase [EC:1.14.13.83] D Y013_14630 precorrin-4 C11-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271] D Y013_10510 precorrin-4 C11-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271] D Y013_14605 precorrin 6A synthase K02228 cobF; precorrin-6A synthase [EC:2.1.1.152] D Y013_10485 precorrin 6A synthase K02228 cobF; precorrin-6A synthase [EC:2.1.1.152] D Y013_14675 cobalt-precorrin-6x reductase K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106] D Y013_10555 cobalt-precorrin-6x reductase K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106] D Y013_14635 precorrin-6Y C5,15-methyltransferase K00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase / cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196] D Y013_10515 precorrin-6Y C5,15-methyltransferase K00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase / cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196] D Y013_14620 cobH; precorrin-8X methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60] D Y013_10500 cobH; precorrin-8X methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60] D Y013_14650 cobyrinic acid a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11] D Y013_10530 cobyrinic acid a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11] D Y013_14610 cobN; cobaltochelatase subunit CobN K02230 cobN; cobaltochelatase CobN [EC:6.6.1.2] D Y013_10490 cobN; cobaltochelatase subunit CobN K02230 cobN; cobaltochelatase CobN [EC:6.6.1.2] D Y013_24635 cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D Y013_14645 cobinamide adenolsyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D Y013_10525 cobinamide adenolsyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D Y013_14680 cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10] D Y013_10560 cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10] D Y013_14655 cobalamin biosynthesis protein CobD K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10] D Y013_10535 cobalamin biosynthesis protein CobD K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10] D Y013_14375 adenosyl cobinamide kinase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62] D Y013_10255 adenosyl cobinamide kinase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62] D Y013_06025 cobalamin synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26] D Y013_06020 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21] D Y013_06160 RNase H K22316 rhnA-cobC; ribonuclease H / adenosylcobalamin/alpha-ribazole phosphatase [EC:3.1.26.4 3.1.3.73] D Y013_14640 magnesium chelatase K03404 chlD; magnesium chelatase subunit D [EC:6.6.1.1] D Y013_10520 magnesium chelatase K03404 chlD; magnesium chelatase subunit D [EC:6.6.1.1] D Y013_21190 magnesium chelatase K03405 chlI; magnesium chelatase subunit I [EC:6.6.1.1] D Y013_02955 heme oxygenase K21480 HO; heme oxygenase (biliverdin-producing, ferredoxin) [EC:1.14.15.20] D Y013_09775 hypothetical protein K23825 K23825; F420H(2)-dependent biliverdin reductase [EC:1.3.98.-] D Y013_15595 bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1] D Y013_17235 bacterioferritin K22336 bfrB; bacterioferritin B [EC:1.16.3.1] D Y013_17125 oxidase K22552 mmcO; multicopper oxidase [EC:1.16.3.1] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:rpy00130] D Y013_09160 ubiquinone/menaquinone biosynthesis methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D Y013_11515 isochorismate synthase K02361 entC; isochorismate synthase [EC:5.4.4.2] D Y013_19765 isochorismate synthase K02361 entC; isochorismate synthase [EC:5.4.4.2] D Y013_09175 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9] D Y013_09195 O-succinylbenzoate synthase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113] D Y013_09240 O-succinylbenzoic acid--CoA ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26] D Y013_09205 crotonase K01661 menB; naphthoate synthase [EC:4.1.3.36] D Y013_15200 thioesterase K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28] D Y013_11080 thioesterase K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28] D Y013_04410 esterase K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28] D Y013_09245 1,4-dihydroxy-2-naphthoate prenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] D Y013_03950 NmrA family transcriptional regulator K19267 qorB; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D Y013_12410 NmrA family protein K19267 qorB; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D Y013_13200 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:rpy00900] D Y013_01920 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D Y013_01160 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D Y013_18855 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] D Y013_21465 4-diphosphocytidyl-2C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D Y013_18860 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] D Y013_01170 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D Y013_21930 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D Y013_19150 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_19210 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_00075 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_00620 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_13405 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_11485 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_19405 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_24230 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_18180 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_19375 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_21490 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_17060 isopentenyl-diphosphate delta-isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2] D Y013_05845 geranylgeranyl pyrophosphate synthase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29] D Y013_21855 Short-chain Z-isoprenyl diphosphate synthase K12503 uppS; short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68] D Y013_06390 UDP pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis [PATH:rpy00906] D Y013_05860 phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32] D Y013_17055 phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32] D Y013_05850 phytoene dehydrogenase K10027 crtI; phytoene desaturase [EC:1.3.99.26 1.3.99.28 1.3.99.29 1.3.99.31] D Y013_17050 phytoene dehydrogenase K10027 crtI; phytoene desaturase [EC:1.3.99.26 1.3.99.28 1.3.99.29 1.3.99.31] D Y013_02705 lycopene cyclase K06443 lcyB; lycopene beta-cyclase [EC:5.5.1.19] C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation [PATH:rpy00903] D Y013_23855 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Y013_24210 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Y013_11580 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Y013_21890 limonene 1,2-epoxide hydrolase K10533 E3.3.2.8; limonene-1,2-epoxide hydrolase [EC:3.3.2.8] D Y013_24505 limonene-1,2-epoxide hydrolase K10533 E3.3.2.8; limonene-1,2-epoxide hydrolase [EC:3.3.2.8] D Y013_12975 esterase K14731 mlhB; epsilon-lactone hydrolase [EC:3.1.1.83] D Y013_23075 esterase K14731 mlhB; epsilon-lactone hydrolase [EC:3.1.1.83] D Y013_13520 lipase K14731 mlhB; epsilon-lactone hydrolase [EC:3.1.1.83] C 00907 Pinene, camphor and geraniol degradation [PATH:rpy00907] D Y013_24455 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D Y013_06925 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D Y013_18185 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D Y013_23280 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D Y013_15550 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D Y013_17300 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D Y013_07145 3-hydroxybutyryl-CoA dehydrogenase K00022 HADH; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D Y013_02625 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products D Y013_13830 beta-lactamase K05555 actIV; cyclase [EC:4.-.-.-] C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis [PATH:rpy00523] D Y013_17575 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D Y013_15075 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D Y013_10955 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D Y013_17580 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D Y013_15080 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D Y013_10960 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D Y013_17570 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D Y013_15070 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D Y013_10950 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D Y013_07685 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides [PATH:rpy01053] D Y013_11515 isochorismate synthase K02361 entC; isochorismate synthase [EC:5.4.4.2] D Y013_19765 isochorismate synthase K02361 entC; isochorismate synthase [EC:5.4.4.2] D Y013_19760 2,3-dihydroxybenzoate-2,3-dehydrogenase K00216 entA; 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase [EC:1.3.1.28] D Y013_19755 entE; enterobactin synthase subunit E K02363 entE; 2,3-dihydroxybenzoate---[aryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.71] C 01055 Biosynthesis of vancomycin group antibiotics D Y013_17580 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D Y013_15080 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D Y013_10960 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids [PATH:rpy00946] D Y013_23530 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism D Y013_22670 urate oxidase K00365 uaZ; urate oxidase [EC:1.7.3.3] C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis D Y013_20620 beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6] D Y013_20630 beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6] C 00332 Carbapenem biosynthesis [PATH:rpy00332] D Y013_00810 gamma-glutamyl kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D Y013_06620 gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00261 Monobactam biosynthesis [PATH:rpy00261] D Y013_19555 antibiotic synthesis protein MbtH K05375 mbtH; MbtH protein D Y013_24490 adenylylsulfate kinase K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D Y013_06495 sulfate adenylyltransferase K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D Y013_06490 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D Y013_18340 aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Y013_18345 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Y013_01425 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D Y013_01395 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:rpy00521] D Y013_11560 sugar kinase K25026 glk; glucokinase [EC:2.7.1.2] D Y013_05890 glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D Y013_07220 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Y013_16020 inositol-3-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4] D Y013_01845 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D Y013_05375 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D Y013_17575 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D Y013_15075 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D Y013_10955 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D Y013_17580 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D Y013_15080 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D Y013_10960 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D Y013_17570 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D Y013_15070 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D Y013_10950 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D Y013_07685 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 00524 Neomycin, kanamycin and gentamicin biosynthesis D Y013_11560 sugar kinase K25026 glk; glucokinase [EC:2.7.1.2] D Y013_05890 glucokinase K25026 glk; glucokinase [EC:2.7.1.2] C 00525 Acarbose and validamycin biosynthesis [PATH:rpy00525] D Y013_17575 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D Y013_15075 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D Y013_10955 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D Y013_17580 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D Y013_15080 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D Y013_10960 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis [PATH:rpy00401] D Y013_17845 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D Y013_05420 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Y013_17755 aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis D Y013_05340 anthranilate synthase subunit I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis D Y013_06220 malonyl CoA-ACP transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D Y013_19140 short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Y013_03795 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Y013_25855 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Y013_23365 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Y013_23505 fabG; 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Y013_11490 fabG; 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Y013_25865 oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Y013_15530 3-oxoacyl-ACP synthase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Y013_13325 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Y013_13165 short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D Y013_06225 acyl carrier protein K02078 acpP; acyl carrier protein D Y013_13445 acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites [PATH:rpy00999] D Y013_02425 S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D Y013_23530 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:rpy00362] D Y013_13585 benzoate 1,2-dioxygenase subunit alpha K05549 benA-xylX; benzoate/toluate 1,2-dioxygenase subunit alpha [EC:1.14.12.10 1.14.12.-] D Y013_13590 benzoate 1,2-dioxygenase subunit beta K05550 benB-xylY; benzoate/toluate 1,2-dioxygenase subunit beta [EC:1.14.12.10 1.14.12.-] D Y013_13595 benzoate 1,2-dioxygenase ferredoxin reductase K05784 benC-xylZ; benzoate/toluate 1,2-dioxygenase reductase component [EC:1.18.1.-] D Y013_13600 benD; 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase K05783 benD-xylL; dihydroxycyclohexadiene carboxylate dehydrogenase [EC:1.3.1.25 1.3.1.-] D Y013_13540 catechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1] D Y013_13535 chloromuconate cycloisomerase K01856 catB; muconate cycloisomerase [EC:5.5.1.1] D Y013_13530 muconolactone delta-isomerase K03464 catC; muconolactone D-isomerase [EC:5.3.3.4] D Y013_21970 alpha/beta hydrolase K01055 pcaD; 3-oxoadipate enol-lactonase [EC:3.1.1.24] D Y013_13395 3-oxoadipate enol-lactone hydrolase K14727 pcaL; 3-oxoadipate enol-lactonase / 4-carboxymuconolactone decarboxylase [EC:3.1.1.24 4.1.1.44] D Y013_15550 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D Y013_17300 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D Y013_15615 2-keto-4-pentenoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80] D Y013_12565 2-keto-4-pentenoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80] D Y013_12505 4-hyroxy-2-oxovalerate aldolase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39] D Y013_15605 4-hyroxy-2-oxovalerate aldolase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39] D Y013_12500 acetaldehyde dehydrogenase K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10] D Y013_15610 acetaldehyde dehydrogenase K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10] D Y013_12510 2-hydroxymuconic semialdehyde dehydrogenase K10217 dmpC; aminomuconate-semialdehyde/2-hydroxymuconate-6-semialdehyde dehydrogenase [EC:1.2.1.32 1.2.1.85] D Y013_05355 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D Y013_12560 4-oxalocrotonate decarboxylase K01617 dmpH; 2-oxo-3-hexenedioate decarboxylase [EC:4.1.1.77] D Y013_21430 Maleylacetate reductase K00217 E1.3.1.32; maleylacetate reductase [EC:1.3.1.32] D Y013_00945 protocatechuate 3,4-dioxygenase subunit alpha K00448 pcaG; protocatechuate 3,4-dioxygenase, alpha subunit [EC:1.13.11.3] D Y013_00950 protocatechuate 3,4-dioxygenase subunit beta K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3] D Y013_13390 3-carboxy-cis,cis-muconate cycloisomerase K01857 pcaB; 3-carboxy-cis,cis-muconate cycloisomerase [EC:5.5.1.2] D Y013_21885 4-carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44] D Y013_00525 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] D Y013_18115 pyridine nucleotide-disulfide oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] D Y013_15850 4-hydroxybenzoate 3-monooxygenase K00481 pobA; p-hydroxybenzoate 3-monooxygenase [EC:1.14.13.2] D Y013_18185 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D Y013_13310 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D Y013_24455 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D Y013_06925 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D Y013_09755 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D Y013_12180 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D Y013_19150 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_19210 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_00075 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_00620 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_13405 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_11485 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_19405 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_24230 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_18180 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_19375 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_21490 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00627 Aminobenzoate degradation [PATH:rpy00627] D Y013_23440 FAD-containing monooxygenase EthA K10215 ethA; monooxygenase [EC:1.14.13.-] D Y013_16280 FAD-containing monooxygenase EthA K10215 ethA; monooxygenase [EC:1.14.13.-] D Y013_06400 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D Y013_25765 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D Y013_12460 glutamyl-tRNA amidotransferase subunit A K01426 E3.5.1.4; amidase [EC:3.5.1.4] D Y013_00710 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D Y013_06900 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D Y013_00965 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D Y013_22045 benzaldehyde dehydrogenase K00141 xylC; benzaldehyde dehydrogenase (NAD) [EC:1.2.1.28] D Y013_13575 cytochrome P450 K23526 gcoA; aromatic O-demethylase, cytochrome P450 subunit [EC:1.14.14.-] D Y013_13580 oxidoreductase K23527 gcoB; aromatic O-demethylase, reductase subunit [EC:1.6.2.-] D Y013_13470 Rieske (2Fe-2S) protein K03862 vanA; vanillate monooxygenase [EC:1.14.13.82] D Y013_13475 flavodoxin K03863 vanB; vanillate monooxygenase ferredoxin subunit D Y013_24455 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D Y013_06925 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] C 00364 Fluorobenzoate degradation [PATH:rpy00364] D Y013_13585 benzoate 1,2-dioxygenase subunit alpha K05549 benA-xylX; benzoate/toluate 1,2-dioxygenase subunit alpha [EC:1.14.12.10 1.14.12.-] D Y013_13590 benzoate 1,2-dioxygenase subunit beta K05550 benB-xylY; benzoate/toluate 1,2-dioxygenase subunit beta [EC:1.14.12.10 1.14.12.-] D Y013_13595 benzoate 1,2-dioxygenase ferredoxin reductase K05784 benC-xylZ; benzoate/toluate 1,2-dioxygenase reductase component [EC:1.18.1.-] D Y013_13600 benD; 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase K05783 benD-xylL; dihydroxycyclohexadiene carboxylate dehydrogenase [EC:1.3.1.25 1.3.1.-] D Y013_13540 catechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1] D Y013_11840 dienelactone hydrolase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D Y013_13535 chloromuconate cycloisomerase K01856 catB; muconate cycloisomerase [EC:5.5.1.1] D Y013_21430 Maleylacetate reductase K00217 E1.3.1.32; maleylacetate reductase [EC:1.3.1.32] C 00625 Chloroalkane and chloroalkene degradation [PATH:rpy00625] D Y013_26015 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D Y013_15285 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D Y013_11165 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D Y013_06250 alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D Y013_23855 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Y013_24210 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Y013_11580 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Y013_08845 alcohol dehydrogenase K17067 mdo; formaldehyde dismutase / methanol dehydrogenase [EC:1.2.98.1 1.1.99.37] D Y013_03650 alpha/beta hydrolase K01561 dehH; haloacetate dehalogenase [EC:3.8.1.3] D Y013_14660 haloacid dehalogenase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] D Y013_10540 haloacid dehalogenase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:rpy00361] D Y013_13540 catechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1] D Y013_11840 dienelactone hydrolase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D Y013_21430 Maleylacetate reductase K00217 E1.3.1.32; maleylacetate reductase [EC:1.3.1.32] D Y013_12685 monooxygenase K10676 tfdB; 2,4-dichlorophenol 6-monooxygenase [EC:1.14.13.20] D Y013_13535 chloromuconate cycloisomerase K01856 catB; muconate cycloisomerase [EC:5.5.1.1] D Y013_14660 haloacid dehalogenase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] D Y013_10540 haloacid dehalogenase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] D Y013_03650 alpha/beta hydrolase K01561 dehH; haloacetate dehalogenase [EC:3.8.1.3] C 00623 Toluene degradation [PATH:rpy00623] D Y013_22045 benzaldehyde dehydrogenase K00141 xylC; benzaldehyde dehydrogenase (NAD) [EC:1.2.1.28] D Y013_13540 catechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1] D Y013_13535 chloromuconate cycloisomerase K01856 catB; muconate cycloisomerase [EC:5.5.1.1] D Y013_11840 dienelactone hydrolase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D Y013_21430 Maleylacetate reductase K00217 E1.3.1.32; maleylacetate reductase [EC:1.3.1.32] C 00622 Xylene degradation [PATH:rpy00622] D Y013_22045 benzaldehyde dehydrogenase K00141 xylC; benzaldehyde dehydrogenase (NAD) [EC:1.2.1.28] D Y013_13585 benzoate 1,2-dioxygenase subunit alpha K05549 benA-xylX; benzoate/toluate 1,2-dioxygenase subunit alpha [EC:1.14.12.10 1.14.12.-] D Y013_13590 benzoate 1,2-dioxygenase subunit beta K05550 benB-xylY; benzoate/toluate 1,2-dioxygenase subunit beta [EC:1.14.12.10 1.14.12.-] D Y013_13595 benzoate 1,2-dioxygenase ferredoxin reductase K05784 benC-xylZ; benzoate/toluate 1,2-dioxygenase reductase component [EC:1.18.1.-] D Y013_13600 benD; 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase K05783 benD-xylL; dihydroxycyclohexadiene carboxylate dehydrogenase [EC:1.3.1.25 1.3.1.-] D Y013_12510 2-hydroxymuconic semialdehyde dehydrogenase K10217 dmpC; aminomuconate-semialdehyde/2-hydroxymuconate-6-semialdehyde dehydrogenase [EC:1.2.1.32 1.2.1.85] D Y013_05355 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D Y013_12560 4-oxalocrotonate decarboxylase K01617 dmpH; 2-oxo-3-hexenedioate decarboxylase [EC:4.1.1.77] D Y013_15615 2-keto-4-pentenoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80] D Y013_12565 2-keto-4-pentenoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80] D Y013_12505 4-hyroxy-2-oxovalerate aldolase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39] D Y013_15605 4-hyroxy-2-oxovalerate aldolase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39] D Y013_12500 acetaldehyde dehydrogenase K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10] D Y013_15610 acetaldehyde dehydrogenase K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10] C 00633 Nitrotoluene degradation [PATH:rpy00633] D Y013_03150 12-oxophytodienoate reductase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-] C 00642 Ethylbenzene degradation D Y013_15550 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D Y013_17300 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 00643 Styrene degradation [PATH:rpy00643] D Y013_25440 betaine-aldehyde dehydrogenase K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39] D Y013_22610 betaine-aldehyde dehydrogenase K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39] D Y013_13090 homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5] D Y013_13080 fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2] D Y013_06400 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D Y013_25765 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D Y013_12460 glutamyl-tRNA amidotransferase subunit A K01426 E3.5.1.4; amidase [EC:3.5.1.4] D Y013_00710 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D Y013_06900 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D Y013_11870 3-oxoadipate:succinyl-CoA transferase subunit A K01039 gctA; glutaconate CoA-transferase, subunit A [EC:2.8.3.12] D Y013_11875 3-oxoadipate:succinyl-CoA transferase subunit B K01040 gctB; glutaconate CoA-transferase, subunit B [EC:2.8.3.12] C 00791 Atrazine degradation [PATH:rpy00791] D Y013_09820 allophanate hydrolase K01457 atzF; allophanate hydrolase [EC:3.5.1.54] D Y013_13940 allophanate hydrolase K01457 atzF; allophanate hydrolase [EC:3.5.1.54] D Y013_12665 cysteine hydrolase K23359 biuH; biuret amidohydrolase [EC:3.5.1.84] D Y013_23460 urea amidolyase K01941 uca; urea carboxylase [EC:6.3.4.6] D Y013_03365 ureC; urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5] D Y013_13880 ureC; urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5] D Y013_03370 urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5] D Y013_03375 ureA; urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5] D Y013_13875 urease subunit beta K14048 ureAB; urease subunit gamma/beta [EC:3.5.1.5] C 00930 Caprolactam degradation [PATH:rpy00930] D Y013_07620 alkane 1-monooxygenase K00496 alkB1_2; alkane 1-monooxygenase [EC:1.14.15.3] D Y013_14995 alkane 1-monooxygenase K00496 alkB1_2; alkane 1-monooxygenase [EC:1.14.15.3] D Y013_10875 alkane 1-monooxygenase K00496 alkB1_2; alkane 1-monooxygenase [EC:1.14.15.3] D Y013_23805 hypothetical protein K01053 gnl; gluconolactonase [EC:3.1.1.17] D Y013_12975 esterase K14731 mlhB; epsilon-lactone hydrolase [EC:3.1.1.83] D Y013_23075 esterase K14731 mlhB; epsilon-lactone hydrolase [EC:3.1.1.83] D Y013_13520 lipase K14731 mlhB; epsilon-lactone hydrolase [EC:3.1.1.83] D Y013_12795 aldehyde dehydrogenase K14519 aldH; NADP-dependent aldehyde dehydrogenase [EC:1.2.1.4] D Y013_15535 acyl-CoA dehydrogenase K06446 DCAA; acyl-CoA dehydrogenase [EC:1.3.99.-] D Y013_24455 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D Y013_06925 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D Y013_18185 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D Y013_07145 3-hydroxybutyryl-CoA dehydrogenase K00022 HADH; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] C 00363 Bisphenol degradation C 00621 Dioxin degradation [PATH:rpy00621] D Y013_05355 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D Y013_12560 4-oxalocrotonate decarboxylase K01617 dmpH; 2-oxo-3-hexenedioate decarboxylase [EC:4.1.1.77] D Y013_15615 2-keto-4-pentenoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80] D Y013_12565 2-keto-4-pentenoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80] D Y013_12505 4-hyroxy-2-oxovalerate aldolase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39] D Y013_15605 4-hyroxy-2-oxovalerate aldolase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39] D Y013_12500 acetaldehyde dehydrogenase K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10] D Y013_15610 acetaldehyde dehydrogenase K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10] C 00626 Naphthalene degradation [PATH:rpy00626] D Y013_26015 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D Y013_15285 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D Y013_11165 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D Y013_06250 alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] C 00624 Polycyclic aromatic hydrocarbon degradation D Y013_00945 protocatechuate 3,4-dioxygenase subunit alpha K00448 pcaG; protocatechuate 3,4-dioxygenase, alpha subunit [EC:1.13.11.3] D Y013_00950 protocatechuate 3,4-dioxygenase subunit beta K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3] C 00365 Furfural degradation C 00984 Steroid degradation [PATH:rpy00984] D Y013_19660 cholesterol oxidase K03333 choD; cholesterol oxidase [EC:1.1.3.6] D Y013_18360 cholesterol oxidase K03333 choD; cholesterol oxidase [EC:1.1.3.6] D Y013_08235 cholesterol oxidase K03333 choD; cholesterol oxidase [EC:1.1.3.6] D Y013_19380 steroid C27-monooxygenase K15981 CYP125A; cholest-4-en-3-one 26-monooxygenase [EC:1.14.15.29] D Y013_19010 3-ketosteroid-delta-1-dehydrogenase K05898 kstD; 3-oxosteroid 1-dehydrogenase [EC:1.3.99.4] D Y013_14855 3-ketosteroid-delta-1-dehydrogenase K05898 kstD; 3-oxosteroid 1-dehydrogenase [EC:1.3.99.4] D Y013_14890 3-ketosteroid-delta-1-dehydrogenase K05898 kstD; 3-oxosteroid 1-dehydrogenase [EC:1.3.99.4] D Y013_10735 3-ketosteroid-delta-1-dehydrogenase K05898 kstD; 3-oxosteroid 1-dehydrogenase [EC:1.3.99.4] D Y013_10770 3-ketosteroid-delta-1-dehydrogenase K05898 kstD; 3-oxosteroid 1-dehydrogenase [EC:1.3.99.4] D Y013_19020 3-ketosteroid-9-alpha-hydroxylase oxygenase subunit K15982 kshA; 3-ketosteroid 9alpha-monooxygenase subunit A [EC:1.14.15.30] D Y013_19240 3-ketosteroid-9-alpha-hydroxylase oxygenase subunit K15982 kshA; 3-ketosteroid 9alpha-monooxygenase subunit A [EC:1.14.15.30] D Y013_19255 3-ketosteroid-9-alpha-hydroxylase reductase subunit K15983 kshB; 3-ketosteroid 9alpha-monooxygenase subunit B [EC:1.14.15.30] D Y013_08850 3-ketosteroid-9-alpha-hydroxylase reductase subunit K15983 kshB; 3-ketosteroid 9alpha-monooxygenase subunit B [EC:1.14.15.30] D Y013_19025 monooxygenase K16047 hsaA; 3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione monooxygenase [EC:1.14.14.12] D Y013_19280 hydroxylase K16047 hsaA; 3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione monooxygenase [EC:1.14.14.12] D Y013_14875 monooxygenase K16048 hsaB; 3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione monooxygenase reductase component [EC:1.5.1.-] D Y013_10755 monooxygenase K16048 hsaB; 3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione monooxygenase reductase component [EC:1.5.1.-] D Y013_19310 flavin oxidoreductase K16048 hsaB; 3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione monooxygenase reductase component [EC:1.5.1.-] D Y013_19040 monooxygenase K16048 hsaB; 3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione monooxygenase reductase component [EC:1.5.1.-] D Y013_19035 iron-dependent extradiol dioxygenase K16049 hsaC; 3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione 4,5-dioxygenase [EC:1.13.11.25] D Y013_19285 iron-dependent extradiol dioxygenase K16049 hsaC; 3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione 4,5-dioxygenase [EC:1.13.11.25] D Y013_19030 4,5-9,10-diseco-3-hydroxy-5,9, 17-trioxoandrosta-1(10),2-diene-4-oate hydrolase K16050 hsaD; 4,5:9,10-diseco-3-hydroxy-5,9,17-trioxoandrosta-1(10),2-diene-4-oate hydrolase [EC:3.7.1.17] D Y013_19130 fatty acid--CoA ligase K18687 fadD3; HIP---CoA ligase [EC:6.2.1.41] D Y013_10750 steroid delta-isomerase K01822 E5.3.3.1; steroid Delta-isomerase [EC:5.3.3.1] D Y013_14870 steroid delta-isomerase K01822 E5.3.3.1; steroid Delta-isomerase [EC:5.3.3.1] D Y013_16310 steroid delta-isomerase K01822 E5.3.3.1; steroid Delta-isomerase [EC:5.3.3.1] D Y013_19395 ketosteroid isomerase K01822 E5.3.3.1; steroid Delta-isomerase [EC:5.3.3.1] D Y013_20155 succinate dehydrogenase K16051 tesI; 3-oxo-5alpha-steroid 4-dehydrogenase [EC:1.3.99.5] C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:rpy03020] D Y013_09015 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D Y013_09010 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D Y013_08445 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D Y013_02415 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors D Y013_20435 helicase K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:rpy03010] D Y013_05035 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D Y013_01115 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D Y013_08560 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D Y013_08450 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D Y013_08505 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D Y013_15915 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D Y013_08920 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D Y013_08520 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D Y013_08355 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D Y013_08595 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D Y013_08455 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D Y013_08925 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D Y013_08460 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D Y013_21220 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D Y013_08525 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D Y013_01345 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D Y013_01010 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D Y013_08545 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D Y013_21215 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D Y013_15905 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D Y013_08570 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D Y013_06565 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D Y013_09085 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D Y013_08575 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D Y013_08590 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D Y013_08585 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D Y013_08530 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D Y013_08515 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D Y013_09075 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D Y013_15900 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D Y013_09080 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D Y013_09090 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D Y013_08360 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D Y013_08540 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D Y013_08495 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D Y013_08555 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D Y013_08440 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D Y013_08510 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D Y013_01045 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D Y013_04780 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D Y013_00795 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D Y013_08565 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D Y013_08580 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D Y013_08535 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D Y013_21540 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D Y013_00800 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D Y013_00890 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D Y013_21230 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D Y013_08550 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D Y013_08500 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D Y013_24555 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D Y013_00930 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D Y013_21240 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D Y013_09120 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D Y013_21225 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D Y013_16490 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D Y013_04785 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D Y013_08465 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D Y013_00005 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Y013_17810 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Y013_18600 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Y013_04685 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Y013_04680 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Y013_00010 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Y013_17815 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Y013_18605 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Y013_00015 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Y013_17820 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Y013_18610 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Y013_04675 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:rpy00970] D Y013_16575 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Y013_21325 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Y013_07195 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Y013_07200 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Y013_17765 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Y013_24510 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Y013_20975 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Y013_00415 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Y013_06330 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Y013_20085 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Y013_20095 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Y013_02020 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D Y013_06690 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Y013_21600 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Y013_20080 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Y013_06680 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Y013_06685 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Y013_00575 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Y013_02025 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Y013_02010 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Y013_11350 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Y013_15470 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Y013_00290 tRNA-His K14226 tRNA-His; tRNA His D Y013_16565 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Y013_02905 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Y013_02910 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Y013_16705 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Y013_00210 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Y013_05120 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Y013_21730 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Y013_00270 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Y013_00275 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Y013_20070 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Y013_09125 tRNA-Met K14230 tRNA-Met; tRNA Met D Y013_07285 tRNA-Met K14230 tRNA-Met; tRNA Met D Y013_13370 tRNA-Met K14230 tRNA-Met; tRNA Met D Y013_06325 tRNA-Met K14230 tRNA-Met; tRNA Met D Y013_20090 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D Y013_04580 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Y013_00580 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Y013_18400 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Y013_18025 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Y013_17720 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Y013_17760 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Y013_17860 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Y013_09130 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Y013_18585 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Y013_19565 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Y013_09105 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D Y013_09135 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D Y013_02015 tRNA-Val K14237 tRNA-Val; tRNA Val D Y013_02005 tRNA-Val K14237 tRNA-Val; tRNA Val D Y013_06195 tRNA-Val K14237 tRNA-Val; tRNA Val D Y013_02030 tRNA-Val K14237 tRNA-Val; tRNA Val D Y013_00395 tRNA-Sec K14238 tRNA-Sec; tRNA Sec D Y013_06695 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Y013_17985 glutamyl-Q tRNA(Asp) ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Y013_19060 amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D Y013_06795 glutamyl-tRNA amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D Y013_25560 glutamyl-tRNA amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D Y013_08600 amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D Y013_17840 amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D Y013_06765 aspartyl/glutamyl-tRNA amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D Y013_06800 glutamyl-tRNA amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D Y013_02280 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Y013_02255 aspS; aspartyl-tRNA synthase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Y013_06365 glycine-tRNA synthetase subunit beta K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D Y013_02040 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D Y013_17360 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D Y013_00400 selenocysteine synthase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] D Y013_18865 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D Y013_21420 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Y013_02445 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D Y013_00770 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D Y013_16330 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Y013_05705 ileS; isoleucyl-tRNA synthase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D Y013_18745 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D Y013_16895 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D Y013_24525 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Y013_01250 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D Y013_02160 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D Y013_04770 phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D Y013_04765 phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D Y013_04690 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Y013_08040 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:rpy03060] D Y013_08490 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D Y013_09100 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D Y013_02555 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D Y013_02120 preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D Y013_02125 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D Y013_02115 protein-export membrane protein YajC K03210 yajC; preprotein translocase subunit YajC D Y013_16480 preprotein translocase subunit YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D Y013_07565 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Y013_01000 signal recognition particle K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D Y013_00980 cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor D Y013_05900 arsenic ABC transporter ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D Y013_04125 preprotein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA D Y013_22955 preprotein translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB D Y013_04130 preprotein translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC D Y013_01050 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D Y013_05685 peptidase A8 K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:rpy04122] D Y013_06855 cysteine desulfarase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Y013_19985 thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D Y013_18060 thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D Y013_24395 thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D Y013_07780 thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D Y013_24045 thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D Y013_06850 thiouridylase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D Y013_07095 molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D Y013_07080 molybdenum cofactor biosynthesis protein MoeA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D Y013_07075 molybdenum cofactor biosynthesis protein MoaD K03636 moaD; sulfur-carrier protein D Y013_07430 molybdopterin biosynthesis MoeZ K21147 moeZR; sulfur-carrier protein adenylyltransferase/sulfurtransferase [EC:2.7.7.80 2.7.7.- 2.8.1.11 2.8.1.-] D Y013_07090 molybdopterin-guanine dinucleotide biosynthesis protein MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D Y013_14245 thiamine biosynthesis protein ThiS K03154 thiS; sulfur carrier protein D Y013_10125 thiamine biosynthesis protein ThiS K03154 thiS; sulfur carrier protein C 03050 Proteasome [PATH:rpy03050] D Y013_04075 ATPase AAA K13527 mpa; proteasome-associated ATPase D Y013_04100 proteasome subunit alpha K03432 psmA; proteasome alpha subunit [EC:3.4.25.1] D Y013_04095 proteasome subunit beta K03433 psmB; proteasome beta subunit [EC:3.4.25.1] C 03018 RNA degradation [PATH:rpy03018] D Y013_00790 ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] D Y013_21695 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Y013_01350 polynucleotide phosphorylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D Y013_23205 cold-shock protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D Y013_00855 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D Y013_02225 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D Y013_24550 transcription termination factor Rho K03628 rho; transcription termination factor Rho D Y013_01430 ribonuclease K12574 rnj; ribonuclease J [EC:3.1.-.-] D Y013_14910 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D Y013_10790 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D Y013_14080 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Y013_09960 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Y013_08275 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Y013_06645 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D Y013_06505 polyphosphate kinase K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D Y013_16400 poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:rpy03030] D Y013_05935 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Y013_25660 exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Y013_12155 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Y013_23535 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Y013_05665 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Y013_18075 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Y013_18580 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Y013_06570 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Y013_16500 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Y013_15895 DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D Y013_06340 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D Y013_15910 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D Y013_12360 ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D Y013_06160 RNase H K22316 rhnA-cobC; ribonuclease H / adenosylcobalamin/alpha-ribazole phosphatase [EC:3.1.26.4 3.1.3.73] D Y013_01055 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D Y013_05085 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Y013_06840 NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:rpy03410] D Y013_18460 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D Y013_00880 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D Y013_18810 adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D Y013_04695 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] D Y013_00940 5-hydroxymethyluracil DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D Y013_21070 DNA lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D Y013_00545 DNA glycosylase K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18] D Y013_07875 DNA glycosylase K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18] D Y013_13130 DNA-3-methyladenine glycosylase K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D Y013_22910 DNA-3-methyladenine glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D Y013_22730 DNA glycosylase K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28] D Y013_17075 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D Y013_22810 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D Y013_14205 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D Y013_10085 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D Y013_08045 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D Y013_08185 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D Y013_23240 endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D Y013_05085 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Y013_06840 NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:rpy03420] D Y013_21625 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D Y013_04800 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D Y013_04950 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D Y013_02520 excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D Y013_21130 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Y013_07330 ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Y013_07360 ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Y013_25945 DNA helicase UvrD K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Y013_05085 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Y013_06840 NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D Y013_20435 helicase K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] C 03430 Mismatch repair [PATH:rpy03430] D Y013_21130 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Y013_07330 ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Y013_07360 ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Y013_25945 DNA helicase UvrD K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Y013_21920 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D Y013_21915 exodeoxyribonuclease K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D Y013_15910 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D Y013_05665 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Y013_16500 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Y013_18075 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Y013_06570 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Y013_18580 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Y013_05935 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Y013_25660 exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Y013_12155 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Y013_23535 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Y013_06840 NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03440 Homologous recombination [PATH:rpy03440] D Y013_15910 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D Y013_16505 recombinase RecF K03629 recF; DNA replication and repair protein RecF D Y013_06395 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D Y013_18210 recombinase RecR K06187 recR; recombination protein RecR D Y013_01515 recombinase RecA K03553 recA; recombination protein RecA D Y013_05085 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Y013_02105 Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D Y013_02110 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D Y013_02100 Holliday junction resolvase K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D Y013_00900 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D Y013_22095 ATPase AAA K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D Y013_22090 exodeoxyribonuclease V subunit gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] D Y013_22100 recombinase RecD K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D Y013_05665 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Y013_16500 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Y013_18075 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Y013_06570 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Y013_18580 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Y013_05935 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Y013_25660 exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Y013_12155 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Y013_23535 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Y013_02430 primosome assembly protein PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining [PATH:rpy03450] D Y013_02700 DNA repair protein K10979 ku; DNA end-binding protein Ku D Y013_03425 ATP-dependent DNA ligase K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] D Y013_20910 ATP-dependent DNA ligase K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 [PATH:rpy03250] D Y013_16640 peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:rpy02010] D Y013_06530 sulfate ABC transporter substrate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D Y013_06525 sulfate ABC transporter permease K02046 cysU; sulfate/thiosulfate transport system permease protein D Y013_06520 sulfate ABC transporter K02047 cysW; sulfate/thiosulfate transport system permease protein D Y013_06515 sulfate ABC transporter ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D Y013_20455 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D Y013_16790 nitrate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D Y013_20460 nitrate ABC transporter permease K15554 ssuC; sulfonate transport system permease protein D Y013_16780 nitrate ABC transporter permease K15554 ssuC; sulfonate transport system permease protein D Y013_20465 sulfonate ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D Y013_16775 sulfonate ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D Y013_16385 molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein D Y013_16380 molybdate ABC transporter permease K02018 modB; molybdate transport system permease protein D Y013_16375 molybdenum ABC transporter ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D Y013_07930 iron ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D Y013_07925 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein D Y013_07920 ABC transporter K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D Y013_23070 amino acid ABC transporter substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein D Y013_15785 glycine/betaine ABC transporter substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein D Y013_15795 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein D Y013_15800 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein D Y013_15790 glycine/betaine ABC transporter ATPase K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D Y013_16070 sugar ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D Y013_23030 ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D Y013_22120 sugar ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D Y013_22135 sugar ABC transporter substrate-binding protein K10227 smoE; polyol transport system substrate-binding protein D Y013_22130 sugar ABC transporter permease K10228 smoF; polyol transport system permease protein D Y013_22125 mannitol ABC transporter permease K10229 smoG; polyol transport system permease protein D Y013_16065 ABC transporter substrate-binding protein K10236 thuE; trehalose/maltose transport system substrate-binding protein D Y013_23015 ABC transporter substrate-binding protein K10236 thuE; trehalose/maltose transport system substrate-binding protein D Y013_16060 ABC transporter permease K10237 thuF; trehalose/maltose transport system permease protein D Y013_23020 ABC transporter permease K10237 thuF; trehalose/maltose transport system permease protein D Y013_23025 sugar ABC transporter permease K10238 thuG; trehalose/maltose transport system permease protein D Y013_16055 sugar ABC transporter permease K10238 thuG; trehalose/maltose transport system permease protein D Y013_09030 mammalian cell entry protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D Y013_09035 mammalian cell entry protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D Y013_09045 ABC transporter substrate-binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D Y013_09050 ABC transporter substrate-binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D Y013_19495 Mce family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D Y013_19500 mammalian cell entry protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D Y013_19505 mammalian cell entry protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D Y013_19510 mammalian cell entry protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D Y013_19515 mammalian cell entry protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D Y013_19520 mammalian cell entry protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D Y013_09040 mammalian cell entry protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D Y013_09055 mammalian cell entry protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D Y013_09060 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D Y013_09065 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D Y013_19485 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D Y013_19490 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D Y013_09070 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D Y013_22580 hypothetical protein K07335 bmpA; basic membrane protein A and related proteins D Y013_22590 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein D Y013_22585 branched-chain amino acid ABC transporter permease K23536 nupC; general nucleoside transport system permease protein D Y013_22595 ABC transporter K23537 nupA; general nucleoside transport system ATP-binding protein D Y013_12070 ABC transporter substrate-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein D Y013_12080 glycerol-3-phosphate ABC transporter permease K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein D Y013_12075 glycerol-3-phosphate ABC transporter permease K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein D Y013_12065 ABC transporter ATPase K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10] D Y013_20015 ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D Y013_20020 phosphate ABC transporter permease K02037 pstC; phosphate transport system permease protein D Y013_20025 phosphate ABC transporter permease K02038 pstA; phosphate transport system permease protein D Y013_20030 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D Y013_01535 glutamate-binding protein K10005 gluB; glutamate transport system substrate-binding protein D Y013_01530 glutamate ABC transporter permease K10006 gluC; glutamate transport system permease protein D Y013_01525 glutamate ABC transporter permease K10007 gluD; glutamate transport system permease protein D Y013_01540 artP; arginine ABC transporter ATP-binding protein K10008 gluA; glutamate transport system ATP-binding protein [EC:7.4.2.1] D Y013_05110 amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D Y013_12320 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D Y013_05090 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D Y013_05095 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D Y013_12315 ABC transporter K01995 livG; branched-chain amino acid transport system ATP-binding protein D Y013_05100 ABC transporter K01995 livG; branched-chain amino acid transport system ATP-binding protein D Y013_05105 branched-chain amino acid ABC transporter ATPase K01996 livF; branched-chain amino acid transport system ATP-binding protein D Y013_12310 ABC transporter K01996 livF; branched-chain amino acid transport system ATP-binding protein D Y013_05280 ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein D Y013_05270 metal ABC transporter permease K02072 metI; D-methionine transport system permease protein D Y013_05275 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein D Y013_13905 ABC transporter substrate-binding protein K11959 urtA; urea transport system substrate-binding protein D Y013_09785 ABC transporter substrate-binding protein K11959 urtA; urea transport system substrate-binding protein D Y013_13910 ABC transporter permease K11960 urtB; urea transport system permease protein D Y013_09790 ABC transporter permease K11960 urtB; urea transport system permease protein D Y013_13915 urea ABC transporter permease K11961 urtC; urea transport system permease protein D Y013_09795 urea ABC transporter permease K11961 urtC; urea transport system permease protein D Y013_13920 urea ABC transporter ATP-binding protein K11962 urtD; urea transport system ATP-binding protein D Y013_09800 urea ABC transporter ATP-binding protein K11962 urtD; urea transport system ATP-binding protein D Y013_13925 urea ABC transporter ATP-binding protein K11963 urtE; urea transport system ATP-binding protein D Y013_09805 urea ABC transporter ATP-binding protein K11963 urtE; urea transport system ATP-binding protein D Y013_05550 ABC transporter substrate-binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein D Y013_05265 iron ABC transporter substrate-binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein D Y013_24070 ABC transporter substrate-binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein D Y013_06960 iron siderophore-binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein D Y013_19775 ABC transporter substrate-binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein D Y013_04425 iron ABC transporter K23186 fepD; iron-siderophore transport system permease protein D Y013_10405 iron ABC transporter permease K23186 fepD; iron-siderophore transport system permease protein D Y013_24075 ABC transporter permease K23186 fepD; iron-siderophore transport system permease protein D Y013_14525 iron ABC transporter permease K23186 fepD; iron-siderophore transport system permease protein D Y013_04430 iron ABC transporter K23187 fepG; iron-siderophore transport system permease protein D Y013_10400 iron-siderophore uptake system transmembrane protein K23187 fepG; iron-siderophore transport system permease protein D Y013_24080 ABC transporter permease K23187 fepG; iron-siderophore transport system permease protein D Y013_14520 iron-siderophore uptake system transmembrane protein K23187 fepG; iron-siderophore transport system permease protein D Y013_04435 iron-enterobactin transporter ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-] D Y013_10395 iron-enterobactin transporter ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-] D Y013_24085 iron-dicitrate ABC transporter ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-] D Y013_14515 iron-enterobactin transporter ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-] D Y013_01335 metal ABC transporter substrate-binding protein K11601 mntC; manganese transport system substrate-binding protein D Y013_01325 membrane protein K11602 mntB; manganese transport system permease protein D Y013_01330 ABC transporter K11603 mntA; manganese transport system ATP-binding protein [EC:7.2.2.5] D Y013_03345 cobalamin biosynthesis protein CbiM K02007 cbiM; cobalt/nickel transport system permease protein D Y013_11725 cobalamin biosynthesis protein CbiM K02007 cbiM; cobalt/nickel transport system permease protein D Y013_01490 biotin biosynthesis protein BioC K03523 bioY; biotin transport system substrate-specific component D Y013_01480 cobalt ABC transporter K16783 bioN; biotin transport system permease protein D Y013_01485 cobalt ABC transporter ATP-binding protein K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-] D Y013_24105 cobalt ABC transporter K16785 ecfT; energy-coupling factor transport system permease protein D Y013_17595 sugar ABC transporter permease K09690 wzm; homopolymeric O-antigen transport system permease protein D Y013_17695 ABC transporter ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14] D Y013_19180 ABC transporter permease K09813 hrtB; hemin transport system permease protein D Y013_16595 ABC transporter permease K09813 hrtB; hemin transport system permease protein D Y013_16590 ABC transporter ATP-binding protein K09814 hrtA; hemin transport system ATP-binding protein [EC:7.6.2.-] D Y013_19185 ABC transporter ATP-binding protein K09814 hrtA; hemin transport system ATP-binding protein [EC:7.6.2.-] D Y013_07235 cell division protein FtsX K09811 ftsX; cell division transport system permease protein D Y013_07240 cell division protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D Y013_17920 multidrug ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D Y013_17925 multidrug ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D Y013_19960 ABC transporter ATP-binding protein K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC D Y013_19955 cysteine ABC transporter ATP-binding protein K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD D Y013_13500 ABC transporter K18230 tylC; macrolide transport system ATP-binding/permease protein C 02060 Phosphotransferase system (PTS) [PATH:rpy02060] D Y013_01605 phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D Y013_01585 HPr kinase K02784 ptsH; phosphocarrier protein HPr D Y013_08670 hypothetical protein K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D Y013_01590 PTS lactose transporter subunit IIC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D Y013_01595 phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] D Y013_09675 phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] C 03070 Bacterial secretion system [PATH:rpy03070] D Y013_02120 preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D Y013_02125 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D Y013_09100 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D Y013_02555 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D Y013_08490 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D Y013_02115 protein-export membrane protein YajC K03210 yajC; preprotein translocase subunit YajC D Y013_16480 preprotein translocase subunit YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D Y013_07565 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Y013_00980 cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor D Y013_01000 signal recognition particle K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D Y013_04125 preprotein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA D Y013_22955 preprotein translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB D Y013_04130 preprotein translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC B B 09132 Signal transduction C 02020 Two-component system [PATH:rpy02020] D Y013_02270 alkaline phosphatase K01113 phoD; alkaline phosphatase D [EC:3.1.3.1] D Y013_02995 alkaline phosphatase K01113 phoD; alkaline phosphatase D [EC:3.1.3.1] D Y013_14450 alkaline phosphatase K01113 phoD; alkaline phosphatase D [EC:3.1.3.1] D Y013_10330 alkaline phosphatase K01113 phoD; alkaline phosphatase D [EC:3.1.3.1] D Y013_09445 histidine kinase K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3] D Y013_09440 XRE family transcriptional regulator K07776 regX3; two-component system, OmpR family, response regulator RegX3 D Y013_20015 ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D Y013_22950 serine protease K04771 degP; serine protease Do [EC:3.4.21.107] D Y013_25420 histidine kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D Y013_25425 transcriptional regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D Y013_25405 ATPase K01546 kdpA; potassium-transporting ATPase potassium-binding subunit D Y013_25410 potassium-transporting ATPase subunit B K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6] D Y013_25415 K+-transporting ATPase subunit ATPase subunit C K01548 kdpC; potassium-transporting ATPase KdpC subunit D Y013_02645 membrane protein K02259 COX15; heme a synthase [EC:1.17.99.9] D Y013_21250 ATP-binding protein K07653 mprB; two-component system, OmpR family, sensor histidine kinase MprB [EC:2.7.13.3] D Y013_21245 transcriptional regulator K07669 mprA; two-component system, OmpR family, response regulator MprA D Y013_21260 protease K08372 pepD; putative serine protease PepD [EC:3.4.21.-] D Y013_07585 sensor histidine kinase K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3] D Y013_07590 XRE family transcriptional regulator K07670 mtrA; two-component system, OmpR family, response regulator MtrA D Y013_16495 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D Y013_01335 metal ABC transporter substrate-binding protein K11601 mntC; manganese transport system substrate-binding protein D Y013_01330 ABC transporter K11603 mntA; manganese transport system ATP-binding protein [EC:7.2.2.5] D Y013_01325 membrane protein K11602 mntB; manganese transport system permease protein D Y013_01145 aldolase K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34] D Y013_25515 citrate lyase subunit beta K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34] D Y013_22985 citrate (pro-3S)-lyase K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34] D Y013_15645 citrate lyase subunit beta K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34] D Y013_23065 malate dehydrogenase K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D Y013_01360 narZ; nitrate reductase A subunit alpha K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-] D Y013_01365 narY; nitrate reductase subunit beta K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-] D Y013_01375 nitrate reductase subunit gamma K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-] D Y013_01370 respiratory nitrate reductase subunit delta K00373 narJ; nitrate reductase molybdenum cofactor assembly chaperone NarJ/NarW D Y013_21040 histidine kinase K07682 devS; two-component system, NarL family, sensor histidine kinase DevS [EC:2.7.13.3] D Y013_21035 LuxR family transcriptional regulator K07695 devR; two-component system, NarL family, response regulator DevR D Y013_18520 conjugal transfer protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D Y013_18525 secretion protein F K12510 tadB; tight adherence protein B D Y013_00995 PII uridylyl-transferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59] D Y013_00990 nitrogen regulatory protein P-II 1 K04751 glnB; nitrogen regulatory protein P-II 1 D Y013_00695 glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Y013_06070 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Y013_06095 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Y013_25885 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Y013_25890 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Y013_19150 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_19210 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_00075 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_00620 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_13405 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_11485 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_19405 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_24230 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_18180 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_19375 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_21490 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_19825 C4-dicarboxylate ABC transporter K11103 dctA; aerobic C4-dicarboxylate transport protein D Y013_03830 histidine kinase K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3] D Y013_18450 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Y013_25845 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D Y013_15815 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D Y013_19945 cytochrome BD ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D Y013_19950 cytochrome C oxidase assembly protein K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D Y013_10900 protein tyrosine phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48] D Y013_06180 protein-tyrosine-phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48] D Y013_15020 protein tyrosine phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48] C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:rpy02024] D Y013_05340 anthranilate synthase subunit I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D Y013_05875 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D Y013_20315 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D Y013_25425 transcriptional regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D Y013_06815 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D Y013_05110 amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D Y013_12320 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D Y013_05090 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D Y013_05095 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D Y013_12315 ABC transporter K01995 livG; branched-chain amino acid transport system ATP-binding protein D Y013_05100 ABC transporter K01995 livG; branched-chain amino acid transport system ATP-binding protein D Y013_05105 branched-chain amino acid ABC transporter ATPase K01996 livF; branched-chain amino acid transport system ATP-binding protein D Y013_12310 ABC transporter K01996 livF; branched-chain amino acid transport system ATP-binding protein D Y013_07130 acyl-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Y013_03885 acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Y013_24255 acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Y013_23190 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Y013_16980 AMP-dependent synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Y013_15540 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Y013_23155 acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Y013_03250 AMP-dependent synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Y013_18450 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Y013_07000 endoglucanase K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78] D Y013_02495 5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D Y013_25345 transporter K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Y013_13870 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Y013_14335 peptide ABC transporter permease K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Y013_10215 peptide ABC transporter permease K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Y013_02130 peptide-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Y013_25340 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D Y013_13865 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D Y013_14330 peptide ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D Y013_10210 peptide ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D Y013_14325 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Y013_10205 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Y013_13860 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Y013_25330 peptide ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D Y013_13855 peptide ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D Y013_14320 glutathione ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D Y013_10200 glutathione ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D Y013_16480 preprotein translocase subunit YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D Y013_09100 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D Y013_02555 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D Y013_08490 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D Y013_02115 protein-export membrane protein YajC K03210 yajC; preprotein translocase subunit YajC D Y013_07565 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Y013_00980 cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor D Y013_01000 signal recognition particle K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis C 02040 Flagellar assembly D Y013_01835 RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D Y013_21695 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism [PATH:rpy04980] D Y013_24635 cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D Y013_02855 membrane ATPase/protein kinase K07588 MMAA; GTPase [EC:3.6.5.-] D Y013_02845 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D Y013_02850 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D Y013_04025 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:rpy01501] D Y013_11505 beta-glucosidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D Y013_04445 peptidase M48 Ste24p K02172 blaR1; bla regulator protein blaR1 D Y013_04440 transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D Y013_20620 beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6] D Y013_20630 beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6] D Y013_05785 cell division protein FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:rpy01502] D Y013_06625 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Y013_08315 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D Y013_05775 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D Y013_05770 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D Y013_05755 UDP-diphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D Y013_14480 hypothetical protein K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D Y013_10360 hypothetical protein K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:rpy01503] D Y013_16450 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Y013_22950 serine protease K04771 degP; serine protease Do [EC:3.4.21.107] D Y013_16640 peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:rpy01000] C 01001 Protein kinases [BR:rpy01001] D Y013_14275 serine/threonine protein kinase K14949 pknG; serine/threonine-protein kinase PknG [EC:2.7.11.1] D Y013_10155 serine/threonine protein kinase K14949 pknG; serine/threonine-protein kinase PknG [EC:2.7.11.1] D Y013_21780 protein kinase K13419 pknK; serine/threonine-protein kinase PknK [EC:2.7.11.1] D Y013_13300 protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D Y013_16670 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D Y013_05870 protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D Y013_16675 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D Y013_08205 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D Y013_07020 hypothetical protein K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] D Y013_09735 anti-sigma factor K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] D Y013_00175 anti-sigma regulatory factor K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] D Y013_10905 protein tyrosine kinase K25588 K25588; tyrosine-protein kinase [EC:2.7.10.3] D Y013_15025 protein tyrosine kinase K25588 K25588; tyrosine-protein kinase [EC:2.7.10.3] D Y013_09445 histidine kinase K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3] D Y013_25420 histidine kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D Y013_21250 ATP-binding protein K07653 mprB; two-component system, OmpR family, sensor histidine kinase MprB [EC:2.7.13.3] D Y013_07585 sensor histidine kinase K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3] D Y013_15165 ATP-binding protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D Y013_02460 ATP-binding protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D Y013_11045 ATP-binding protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D Y013_21040 histidine kinase K07682 devS; two-component system, NarL family, sensor histidine kinase DevS [EC:2.7.13.3] D Y013_20425 histidine kinase K02476 K02476; two-component system, CitB family, sensor kinase [EC:2.7.13.3] D Y013_20815 histidine kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3] D Y013_03830 histidine kinase K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3] D Y013_07490 ATPase K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:rpy01009] D Y013_07600 S-adenosyl-L-homocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D Y013_14095 heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG D Y013_09975 heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG D Y013_16690 potassium-transporting ATPase subunit B K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] D Y013_06950 phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 01002 Peptidases and inhibitors [BR:rpy01002] D Y013_05685 peptidase A8 K03101 lspA; signal peptidase II [EC:3.4.23.36] D Y013_02320 type IV prepilin leader peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D Y013_08230 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D Y013_25840 amidotransferase K07010 K07010; putative glutamine amidotransferase D Y013_05925 hypothetical protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D Y013_07975 hydrolase Nlp/P60 K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D Y013_05930 hydrolase K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D Y013_02730 invasin K21473 ripA; peptidoglycan DL-endopeptidase RipA [EC:3.4.-.-] D Y013_21815 lytic transglycosylase K21473 ripA; peptidoglycan DL-endopeptidase RipA [EC:3.4.-.-] D Y013_19910 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D Y013_24205 GltA K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D Y013_16850 glutamate synthase K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D Y013_08325 glutamine amidotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Y013_05995 asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D Y013_25095 glutamine amidotransferase K05520 yhbO; deglycase [EC:3.5.1.124] D Y013_09695 glutamine amidotransferase K05520 yhbO; deglycase [EC:3.5.1.124] D Y013_19900 peptidase K07052 K07052; CAAX protease family protein D Y013_22705 abortive infection protein K07052 K07052; CAAX protease family protein D Y013_00520 aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D Y013_03955 aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D Y013_11980 peptidase M13 K07386 pepO; putative endopeptidase [EC:3.4.24.-] D Y013_06040 aminopeptidase A K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D Y013_22875 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D Y013_00255 beta-Ala-His dipeptidase K23980 tpdA; cysteinylglycine-S-conjugate dipeptidase [EC:3.4.13.23] D Y013_01200 methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D Y013_22015 methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D Y013_08480 methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D Y013_18685 cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D Y013_09145 protease K03799 htpX; heat shock protein HtpX [EC:3.4.24.-] D Y013_04445 peptidase M48 Ste24p K02172 blaR1; bla regulator protein blaR1 D Y013_22950 serine protease K04771 degP; serine protease Do [EC:3.4.21.107] D Y013_21260 protease K08372 pepD; putative serine protease PepD [EC:3.4.21.-] D Y013_14960 protease K18546 sprC; streptogrisin C [EC:3.4.21.-] D Y013_14965 protease K18546 sprC; streptogrisin C [EC:3.4.21.-] D Y013_10845 protease K18546 sprC; streptogrisin C [EC:3.4.21.-] D Y013_08395 serine protease K14743 mycP; membrane-anchored mycosin MYCP [EC:3.4.21.-] D Y013_14020 prolyl oligopeptidase K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26] D Y013_09900 prolyl oligopeptidase K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26] D Y013_19810 protease K01354 ptrB; oligopeptidase B [EC:3.4.21.83] D Y013_18665 D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D Y013_00590 ATP-dependent Clp protease ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D Y013_00595 clpP; ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D Y013_22535 ATP-dependent Clp protease ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D Y013_22540 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D Y013_07305 signal protein PDZ K07177 K07177; Lon-like protease D Y013_01620 LexA family transcriptional regulator K01356 lexA; repressor LexA [EC:3.4.21.88] D Y013_05130 LexA family transcriptional regulator K01356 lexA; repressor LexA [EC:3.4.21.88] D Y013_01050 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D Y013_06115 proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5] D Y013_24955 proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5] D Y013_26050 proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5] D Y013_13510 hydrolase K01054 MGLL; acylglycerol lipase [EC:3.1.1.23] D Y013_24325 peptidase K05995 pepE; dipeptidase E [EC:3.4.13.21] D Y013_04100 proteasome subunit alpha K03432 psmA; proteasome alpha subunit [EC:3.4.25.1] D Y013_04095 proteasome subunit beta K03433 psmB; proteasome beta subunit [EC:3.4.25.1] D Y013_08825 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D Y013_18100 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D Y013_04195 peptidase U62 modulator of DNA gyrase K03568 tldD; TldD protein C 01003 Glycosyltransferases [BR:rpy01003] D Y013_04220 dolichol-phosphate mannosyltransferase K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83] D Y013_21380 hypothetical protein K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109] D Y013_02060 GDP-mannose-dependent alpha-(1-2)-phosphatidylinositol mannosyltransferase K08256 pimA; phosphatidyl-myo-inositol alpha-mannosyltransferase [EC:2.4.1.345] D Y013_05915 GDP-mannose-dependent alpha-(1-6)-phosphatidylinositol monomannoside mannosyltransferase K13668 pimB; phosphatidyl-myo-inositol dimannoside synthase [EC:2.4.1.346] D Y013_22765 pimE; mannosyltransferase K13669 pimE; alpha-1,2-mannosyltransferase [EC:2.4.1.-] D Y013_09165 GDP-mannose-dependent alpha-mannosyltransferase K12583 mgtA; phosphatidylinositol alpha 1,6-mannosyltransferase [EC:2.4.1.-] D Y013_06890 glycogen synthase K16150 K16150; glycogen synthase [EC:2.4.1.11] D Y013_22925 glycosyl transferase family 1 K16148 glgM; alpha-maltose-1-phosphate synthase [EC:2.4.1.342] D Y013_24580 UDP-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D Y013_13655 glycosyltransferase K13671 K13671; alpha-1,2-mannosyltransferase [EC:2.4.1.-] D Y013_16765 hypothetical protein K13671 K13671; alpha-1,2-mannosyltransferase [EC:2.4.1.-] D Y013_05855 membrane protein K14337 mptA; alpha-1,6-mannosyltransferase [EC:2.4.1.-] D Y013_02660 membrane protein K14339 mptB; alpha-1,6-mannosyltransferase [EC:2.4.1.-] D Y013_17590 mannosyltransferase K14340 K14340; mannosyltransferase [EC:2.4.1.-] D Y013_17485 arabinosyltransferase K11386 embB; arabinosyltransferase B [EC:2.4.2.-] D Y013_06975 arabinosyltransferase K11387 embC; arabinosyltransferase C [EC:2.4.2.-] D Y013_17490 arabinosyltransferase K11387 embC; arabinosyltransferase C [EC:2.4.2.-] D Y013_17535 membrane protein K13686 aftA; galactan 5-O-arabinofuranosyltransferase [EC:2.4.2.46] D Y013_17430 membrane protein K13687 aftB; arabinofuranosyltransferase [EC:2.4.2.-] D Y013_01980 membrane protein K16647 aftC; arabinofuranan 3-O-arabinosyltransferase [EC:2.4.2.47] D Y013_11525 membrane protein K16648 aftD; arabinofuranan 3-O-arabinosyltransferase [EC:2.4.2.-] D Y013_17690 UDP-galactofuranosyl transferase GlfT1 K16649 glft1; rhamnopyranosyl-N-acetylglucosaminyl-diphospho-decaprenol beta-1,3/1,4-galactofuranosyltransferase [EC:2.4.1.287] D Y013_17415 glycosyl transferase K16650 glft2; galactofuranosylgalactofuranosylrhamnosyl-N-acetylglucosaminyl-diphospho-decaprenol beta-1,5/1,6-galactofuranosyltransferase [EC:2.4.1.288] D Y013_17585 glycosyl transferase K16650 glft2; galactofuranosylgalactofuranosylrhamnosyl-N-acetylglucosaminyl-diphospho-decaprenol beta-1,5/1,6-galactofuranosyltransferase [EC:2.4.1.288] D Y013_07680 dTDP-Rha:alpha-D-GlcNAc-pyrophosphate polyprenol, alpha-3-L-rhamnosyltransferase K16870 wbbL; N-acetylglucosaminyl-diphospho-decaprenol L-rhamnosyltransferase [EC:2.4.1.289] D Y013_21640 glycosyl transferase K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-] D Y013_20100 glycosyl transferase family 1 K26815 manT; MMP alpha-(1->4)-mannosyltransferase [EC:2.4.1.393] D Y013_19535 trehalose-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347] D Y013_09705 trehalose-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347] D Y013_22900 glucosyl-3-phosphoglycerate synthase K13693 gpgS; glucosyl-3-phosphoglycerate synthase [EC:2.4.1.266] C 01005 Lipopolysaccharide biosynthesis proteins [BR:rpy01005] D Y013_24580 UDP-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:rpy01011] D Y013_24640 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Y013_09515 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D Y013_05750 UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D Y013_05765 murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D Y013_05780 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D Y013_03000 UDP-N-acetylmuramyl peptide synthase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D Y013_06625 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Y013_08315 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D Y013_08860 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D Y013_05770 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D Y013_05755 UDP-diphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D Y013_14480 hypothetical protein K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D Y013_10360 hypothetical protein K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D Y013_02965 UDP pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D Y013_16415 peptidoglycan flippase murj K03980 murJ; putative peptidoglycan lipid II flippase D Y013_05785 cell division protein FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D Y013_16680 penicillin-binding protein A K05364 pbpA; penicillin-binding protein A D Y013_18665 D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D Y013_05925 hypothetical protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D Y013_07975 hydrolase Nlp/P60 K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D Y013_05930 hydrolase K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D Y013_02730 invasin K21473 ripA; peptidoglycan DL-endopeptidase RipA [EC:3.4.-.-] D Y013_21815 lytic transglycosylase K21473 ripA; peptidoglycan DL-endopeptidase RipA [EC:3.4.-.-] D Y013_02290 hypothetical protein K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D Y013_16450 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] C 01004 Lipid biosynthesis proteins [BR:rpy01004] D Y013_00225 3-oxoacyl-ACP synthase K11533 fas; fatty acid synthase, bacteria type [EC:2.3.1.-] D Y013_06220 malonyl CoA-ACP transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D Y013_23360 3-ketoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D Y013_19140 short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Y013_03795 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Y013_25855 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Y013_23365 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Y013_23505 fabG; 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Y013_11490 fabG; 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Y013_25865 oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Y013_15530 3-oxoacyl-ACP synthase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Y013_13325 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Y013_13165 short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Y013_02085 acyl-CoA thioesterase K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] D Y013_05300 acyl-CoA thioesterase K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] D Y013_11460 3-oxoacyl-ACP synthase K11608 mtfabH; mycobacterial beta-ketoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.301] D Y013_06230 3-oxoacyl-ACP synthase K11609 kasA; meromycolic acid 3-oxoacyl-(acyl carrier protein) synthase I [EC:2.3.1.293] D Y013_02750 3-oxoacyl-ACP reductase K11610 mabA; beta-ketoacyl ACP reductase [EC:1.1.1.100] D Y013_02755 enoyl-ACP reductase K11611 inhA; meromycolic acid enoyl-[acyl-carrier-protein] reductase [EC:1.3.1.118] D Y013_20050 fatty acid desaturase K03921 FAB2; acyl-[acyl-carrier-protein] desaturase [EC:1.14.19.2 1.14.19.11 1.14.19.26] D Y013_00350 fatty acid desaturase K22769 desA3; NADPH-dependent stearoyl-CoA 9-desaturase [EC:1.14.19.-] D Y013_07530 stearoyl-CoA 9-desaturase K22769 desA3; NADPH-dependent stearoyl-CoA 9-desaturase [EC:1.14.19.-] D Y013_09825 fatty acid desaturase K22769 desA3; NADPH-dependent stearoyl-CoA 9-desaturase [EC:1.14.19.-] D Y013_07535 fatty acid desaturase K22769 desA3; NADPH-dependent stearoyl-CoA 9-desaturase [EC:1.14.19.-] D Y013_13945 fatty acid desaturase K22769 desA3; NADPH-dependent stearoyl-CoA 9-desaturase [EC:1.14.19.-] D Y013_17460 polyketide synthase K12437 pks13; polyketide synthase 13 D Y013_01195 AMP-dependent synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Y013_25910 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Y013_18500 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Y013_20695 acyl-CoA synthetase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17] D Y013_08695 acetoacetyl-CoA synthetase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16] D Y013_07130 acyl-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Y013_03885 acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Y013_24255 acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Y013_23190 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Y013_16980 AMP-dependent synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Y013_15540 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Y013_23155 acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Y013_03250 AMP-dependent synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Y013_04705 acyl-CoA synthetase K03822 K03822; putative long chain acyl-CoA synthase [EC:6.2.1.-] D Y013_22850 acyl-CoA synthetase K12429 fadD36; fatty acid CoA ligase FadD36 D Y013_13060 acyl-CoA synthetase K12429 fadD36; fatty acid CoA ligase FadD36 D Y013_17455 nitrate ABC transporter substrate-binding protein K12428 fadD32; fatty acid CoA ligase FadD32 D Y013_22890 AMP-dependent synthetase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-] D Y013_18270 long-chain fatty acid--CoA ligase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-] D Y013_12400 acyl-CoA synthetase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-] D Y013_14840 acyl-CoA synthetase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-] D Y013_10720 acyl-CoA synthetase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-] D Y013_08705 AMP-binding protein K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-] D Y013_21530 long-chain fatty acid--CoA ligase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-] D Y013_19460 acyl-CoA synthetase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-] D Y013_20195 glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D Y013_05885 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins [BR:rpy01008] D Y013_13830 beta-lactamase K05555 actIV; cyclase [EC:4.-.-.-] D Y013_19555 antibiotic synthesis protein MbtH K05375 mbtH; MbtH protein D Y013_19755 entE; enterobactin synthase subunit E K02363 entE; 2,3-dihydroxybenzoate---[aryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.71] C 01006 Prenyltransferases [BR:rpy01006] D Y013_05845 geranylgeranyl pyrophosphate synthase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29] D Y013_21855 Short-chain Z-isoprenyl diphosphate synthase K12503 uppS; short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68] D Y013_06390 UDP pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D Y013_05860 phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32] D Y013_17055 phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32] D Y013_01565 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D Y013_09245 1,4-dihydroxy-2-naphthoate prenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] D Y013_02630 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D Y013_17425 phosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase K14136 K14136; decaprenyl-phosphate phosphoribosyltransferase [EC:2.4.2.45] C 01007 Amino acid related enzymes [BR:rpy01007] D Y013_06695 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Y013_17985 glutamyl-Q tRNA(Asp) ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Y013_04690 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Y013_08040 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D Y013_18865 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D Y013_24525 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Y013_21420 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Y013_05705 ileS; isoleucyl-tRNA synthase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D Y013_00770 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D Y013_16330 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Y013_18745 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D Y013_16895 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D Y013_02255 aspS; aspartyl-tRNA synthase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Y013_02160 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D Y013_06365 glycine-tRNA synthetase subunit beta K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D Y013_17360 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D Y013_01250 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D Y013_02040 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D Y013_02280 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Y013_04770 phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D Y013_04765 phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D Y013_15005 aminotransferase AlaT K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D Y013_10885 aminotransferase AlaT K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D Y013_20335 aminotransferase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17] D Y013_05420 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Y013_17755 aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Y013_05580 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D Y013_15385 aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D Y013_11265 aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D Y013_07840 L-lysine aminotransferase K03918 lat; L-lysine 6-transaminase [EC:2.6.1.36] D Y013_04730 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D Y013_19050 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D Y013_00840 diadenosine tetraphosphatase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76] D Y013_01645 adenosylmethionine-8-amino-7-oxononanoate aminotransferase K12256 spuC; putrescine---pyruvate transaminase [EC:2.6.1.113] D Y013_05590 adenosylmethionine--8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D Y013_09320 glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D Y013_06030 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Y013_20595 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00199 Cytochrome P450 [BR:rpy00199] D Y013_19380 steroid C27-monooxygenase K15981 CYP125A; cholest-4-en-3-one 26-monooxygenase [EC:1.14.15.29] D Y013_12005 cytochrome P450 K23812 CYP150A5; cytochrome P450 family 150 subfamily A5 [EC:1.14.-.-] C 00194 Photosynthesis proteins [BR:rpy00194] D Y013_17120 biphenyl 2,3-dioxygenase K02638 petE; plastocyanin D Y013_24625 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D Y013_24620 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D Y013_24615 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D Y013_24610 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D Y013_24605 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D Y013_24600 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D Y013_24595 F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D Y013_24590 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:rpy03000] D Y013_17805 DNA methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Y013_09620 AraC family transcriptional regulator K13652 K13652; AraC family transcriptional regulator D Y013_13130 DNA-3-methyladenine glycosylase K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D Y013_01660 hydrogen peroxide-inducible protein K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D Y013_17935 LysR family transcriptional regulator K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor D Y013_01600 D-beta-D-heptose 1-phosphate adenosyltransferase K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor D Y013_23730 transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D Y013_13305 LacI family transcription regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D Y013_14025 LacI family transcription regulator K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG D Y013_09905 LacI family transcription regulator K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG D Y013_18170 GntR family transcriptional regulator K24968 phnF; GntR family transcriptional regulator, repressor of the phnDCE operon D Y013_11805 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator D Y013_25545 GntR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D Y013_25860 GntR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D Y013_03470 GntR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D Y013_05515 TetR family transcriptional regulator K18476 tetR; TetR/AcrR family transcriptional regulator, tetracycline repressor protein D Y013_23600 TetR family transcriptional regulator K02167 betI; TetR/AcrR family transcriptional regulator, transcriptional repressor of bet genes D Y013_08900 TetR family transcriptional regulator K21961 ethR; TetR/AcrR family transcriptional regulator, ethionamide resistance regulator D Y013_02715 TetR family transcriptional regulator K21962 acnR; TetR/AcrR family transcriptional regulator, transcriptional repressor of aconitase D Y013_19220 TetR family transcriptional regulator K21962 acnR; TetR/AcrR family transcriptional regulator, transcriptional repressor of aconitase D Y013_00615 TetR family transcriptional regulator K22107 kstR; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator D Y013_19320 TetR family transcriptional regulator K22107 kstR; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator D Y013_18935 transcriptional regulator K22107 kstR; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator D Y013_20165 TetR family transcriptional regulator K22107 kstR; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator D Y013_19145 TetR family transcriptional regulator K22108 kstR2; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator D Y013_13230 TetR family transcriptional regulator K22108 kstR2; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator D Y013_17310 TetR family transcriptional regulator K22108 kstR2; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator D Y013_23175 TetR family transcriptional regulator K23777 cecR; TetR/AcrR family transcriptional regulator, regulator of cefoperazone and chloramphenicol sensitivity D Y013_08790 TetR family transcriptional regulator K24699 mftR; TetR/AcrR family transcriptional regulator, regulator of mycofactocin system D Y013_12915 TetR family transcriptional regulator K27107 mce3R; TetR/AcrR family transcriptional regulator, mce3 operon repressor D Y013_01390 TetR family transcriptional regulator K23778 rcdA; TetR/AcrR family transcriptional regulator, regulator of biofilm formation and stress response D Y013_06405 TetR family transcriptional regulator K23778 rcdA; TetR/AcrR family transcriptional regulator, regulator of biofilm formation and stress response D Y013_07845 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D Y013_12160 LuxR family transcriptional regulator K21685 ramA; LuxR family transcriptional regulator, regulator of acetate metabolism D Y013_01190 LuxR family transcriptional regulator K21685 ramA; LuxR family transcriptional regulator, regulator of acetate metabolism D Y013_06810 hypothetical protein K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein D Y013_21575 hypothetical protein K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein D Y013_12370 MarR family transcriptional regulator K22296 nicR; MarR family transcriptional regulator, lower aerobic nicotinate degradation pathway regulator D Y013_20280 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator D Y013_19715 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator D Y013_04320 transcriptional regulator K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR D Y013_14895 MerR family transcriptional regulator K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR D Y013_10775 MerR family transcriptional regulator K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR D Y013_15710 MerR family transcriptional regulator K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR D Y013_06375 Fur family transcriptional regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D Y013_18375 Fur family transcriptional regulator K22297 furA; Fur family transcriptional regulator, stress-responsive regulator D Y013_06075 Fur family transcriptional regulator K22297 furA; Fur family transcriptional regulator, stress-responsive regulator D Y013_12295 IclR family transcriptional regulator K13641 iclR; IclR family transcriptional regulator, acetate operon repressor D Y013_13065 IclR family transcriptional regulator K13641 iclR; IclR family transcriptional regulator, acetate operon repressor D Y013_13400 IclR family transcriptional regulator K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein D Y013_13545 IclR family transcriptional regulator K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein D Y013_18450 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Y013_21005 transcriptional regulator K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor D Y013_15860 ArsR family transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D Y013_26115 ArsR family transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D Y013_26145 ArsR family transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D Y013_12855 ArsR family transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D Y013_15885 ArsR family transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D Y013_13800 ArsR family transcriptional regulator K23988 arsR-arsC; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor / arsenate reductase (thioredoxin) [EC:1.20.4.4] D Y013_06370 ArsR family transcriptional regulator K22298 smtB; ArsR family transcriptional regulator, zinc-responsive transcriptional repressor D Y013_09770 transcriptional regulator K07110 ramB; XRE family transcriptional regulator, fatty acid utilization regulator D Y013_01465 XRE family transcriptional regulator K27043 clgR; XRE family transcriptional regulator, stress-response regulator D Y013_13465 regulatory protein K26740 vanR; PadR family transcriptional regulator, regulator of vanillate utilization D Y013_23300 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator D Y013_01705 dihydrofolate reductase K26252 dtxR; DtxR family transcriptional regulator, iron-dependent repressor D Y013_01320 DtxR family transcriptional regulator K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator D Y013_04440 transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D Y013_07755 biotin--acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D Y013_24055 cytidylyltransferase K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22] D Y013_25435 Fis family transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D Y013_12750 Fis family transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D Y013_12870 transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D Y013_13010 transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D Y013_09365 REX family transcriptional regulator K01926 rex; redox-sensing transcriptional repressor D Y013_13075 XRE family transcriptional regulator K07727 K07727; putative transcriptional regulator D Y013_05615 XRE family transcriptional regulator K07729 K07729; putative transcriptional regulator D Y013_13240 DNA-binding protein K07729 K07729; putative transcriptional regulator D Y013_20725 transcriptional regulator K07729 K07729; putative transcriptional regulator D Y013_11400 1-pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D Y013_15520 hypothetical protein K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D Y013_01805 hypothetical protein K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D Y013_08270 WhiB family transcriptional regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D Y013_07650 WhiB family regulatory protein K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D Y013_03495 WhiB family transcriptional regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D Y013_11850 WhiB family transcriptional regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D Y013_12035 WhiB family transcriptional regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D Y013_23755 WhiB family transcriptional regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D Y013_18420 transcriptional regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D Y013_07485 WhiB family transcriptional regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D Y013_07325 transcriptional regulator K18958 whiB7; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D Y013_16735 regulated in copper repressor K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor D Y013_12450 CdaR family transcriptional regulator K09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein D Y013_16460 chromosome partitioning protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Y013_18850 CarD family transcriptional regulator K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription D Y013_04720 arginine repressor K03402 argR; transcriptional regulator of arginine metabolism D Y013_06460 HrcA family transcriptional regulator K03705 hrcA; heat-inducible transcriptional repressor D Y013_14065 PspC family transcriptional regulator K03973 pspC; phage shock protein C D Y013_09945 PspC family transcriptional regulator K03973 pspC; phage shock protein C D Y013_22140 MarR family transcriptional regulator K05346 deoR; deoxyribonucleoside regulator D Y013_02365 uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D Y013_16355 hypothetical protein K07735 algH; putative transcriptional regulator D Y013_01630 NrdR family transcriptional regulator K07738 nrdR; transcriptional repressor NrdR D Y013_05800 cell division protein MraZ K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:rpy03021] D Y013_20435 helicase K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] D Y013_08445 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D Y013_09015 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D Y013_09010 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D Y013_02415 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D Y013_01835 RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor D Y013_01720 RNA polymerase sigma factor K03087 rpoS; RNA polymerase nonessential primary-like sigma factor D Y013_07505 RNA polymerase sigma factor RpoE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D Y013_20350 RNA polymerase sigma factor SigJ K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D Y013_16920 RNA polymerase sigma factor SigK K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D Y013_16420 RNA polymerase sigma factor SigM K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D Y013_11940 RNA polymerase sigma70 factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D Y013_08260 RNA polymerase sigma factor SigD K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D Y013_22940 RNA polymerase sigma 70 K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D Y013_02570 RNA polymerase subunit sigma-24 K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D Y013_21405 RNA polymerase sigma24 factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D Y013_09740 RNA polymerase sigma factor SigF K03090 sigB; RNA polymerase sigma-B factor D Y013_01275 transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA D Y013_02360 transcription antitermination protein NusB K03625 nusB; transcription antitermination protein NusB D Y013_09095 transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D Y013_02075 histidine kinase K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3] D Y013_02080 sigma factor sigB regulation protein rsbQ K19707 rsbQ; sigma-B regulation protein RsbQ D Y013_00180 anti-sigma-factor antagonist K04749 rsbV; anti-sigma B factor antagonist D Y013_07015 anti-sigma factor antagonist K04749 rsbV; anti-sigma B factor antagonist D Y013_07020 hypothetical protein K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] D Y013_09735 anti-sigma factor K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] D Y013_00175 anti-sigma regulatory factor K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] D Y013_21820 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D Y013_24550 transcription termination factor Rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:rpy03019] D Y013_00790 ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] D Y013_00935 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D Y013_01430 ribonuclease K12574 rnj; ribonuclease J [EC:3.1.-.-] D Y013_00295 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D Y013_23205 cold-shock protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D Y013_00855 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D Y013_02225 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D Y013_21695 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Y013_01350 polynucleotide phosphorylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D Y013_24550 transcription termination factor Rho K03628 rho; transcription termination factor Rho D Y013_14910 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D Y013_10790 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D Y013_14080 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Y013_09960 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Y013_08275 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Y013_06645 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D Y013_06505 polyphosphate kinase K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D Y013_16400 poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D Y013_16970 ribonuclease K02553 rraA; regulator of ribonuclease activity A D Y013_02525 glmZ(sRNA)-inactivating NTPase K06958 rapZ; RNase adapter protein RapZ D Y013_04135 DEAD/DEAH box helicase K03727 helY; ATP-dependent RNA helicase HelY [EC:5.6.2.6] D Y013_20270 RNA helicase K03727 helY; ATP-dependent RNA helicase HelY [EC:5.6.2.6] D Y013_01635 ATP-dependent helicase K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6] C 03041 Spliceosome C 03011 Ribosome [BR:rpy03011] D Y013_05035 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D Y013_01115 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D Y013_08560 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D Y013_08450 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D Y013_08505 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D Y013_15915 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D Y013_08920 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D Y013_08520 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D Y013_08355 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D Y013_08595 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D Y013_08455 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D Y013_08925 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D Y013_08460 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D Y013_21220 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D Y013_08525 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D Y013_01345 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D Y013_01010 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D Y013_08545 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D Y013_21215 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D Y013_15905 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D Y013_08570 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D Y013_06565 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D Y013_09085 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D Y013_08575 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D Y013_08590 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D Y013_08585 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D Y013_08530 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D Y013_08515 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D Y013_15900 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D Y013_09080 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D Y013_09090 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D Y013_09075 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D Y013_08360 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D Y013_08540 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D Y013_08495 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D Y013_08555 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D Y013_08440 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D Y013_08510 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D Y013_01045 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D Y013_04780 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D Y013_00795 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D Y013_08565 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D Y013_08580 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D Y013_08535 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D Y013_00800 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D Y013_00890 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D Y013_21230 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D Y013_08550 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D Y013_08500 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D Y013_24555 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D Y013_00930 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D Y013_21240 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D Y013_09120 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D Y013_21225 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D Y013_16490 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D Y013_04785 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D Y013_08465 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D Y013_21540 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D Y013_00015 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Y013_17820 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Y013_18610 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Y013_04675 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Y013_00005 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Y013_17810 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Y013_18600 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Y013_04685 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Y013_04680 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Y013_00010 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Y013_17815 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Y013_18605 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:rpy03009] D Y013_00935 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D Y013_00295 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D Y013_06415 GTPase Era K03595 era; GTPase D Y013_00805 obgE; GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-] D Y013_01275 transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA D Y013_02360 transcription antitermination protein NusB K03625 nusB; transcription antitermination protein NusB D Y013_09095 transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D Y013_21450 16S rRNA methyltransferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D Y013_02450 methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D Y013_21790 SAM-dependent methyltransferase K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172] D Y013_00910 methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D Y013_06450 16S rRNA methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D Y013_16470 16S rRNA methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D Y013_05795 16S rRNA methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D Y013_21385 16S rRNA methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D Y013_04650 cytochrome C peroxidase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D Y013_22920 methyltransferase type 11 K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187] D Y013_18870 rRNA methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D Y013_01150 50S rRNA methyltransferase K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D Y013_04040 pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D Y013_20225 pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D Y013_21995 pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D Y013_04595 MFS transporter K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D Y013_05680 RNA pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D Y013_08295 alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D Y013_21315 N-acetyltransferase GCN5 K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267] D Y013_01020 16S rRNA-processing protein RimM K02860 rimM; 16S rRNA processing protein RimM D Y013_00790 ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] D Y013_02285 Holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D Y013_23205 cold-shock protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D Y013_03280 GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D Y013_07525 GTPase EngC K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D Y013_04585 engA; GTP-binding protein Der K03977 engA; GTPase D Y013_01575 GTP-binding protein K03665 hflX; GTPase D Y013_24575 hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D Y013_02140 GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D Y013_01290 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A D Y013_01270 ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP D Y013_16965 RNA-binding protein S4 K14761 rlbA; ribosome-associated protein D Y013_22085 hypothetical protein K14761 rlbA; ribosome-associated protein D Y013_06600 iojap family protein K09710 ybeB; ribosome-associated protein D Y013_06425 heat-shock protein K07042 ybeY; probable rRNA maturation factor D Y013_21965 GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase D Y013_00925 hypothetical protein K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:rpy03016] D Y013_15140 ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11] D Y013_11020 ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11] D Y013_06695 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Y013_17985 glutamyl-Q tRNA(Asp) ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Y013_01250 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D Y013_05705 ileS; isoleucyl-tRNA synthase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D Y013_16330 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Y013_21420 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Y013_24525 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Y013_18745 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D Y013_16895 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D Y013_02255 aspS; aspartyl-tRNA synthase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Y013_02280 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Y013_06365 glycine-tRNA synthetase subunit beta K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D Y013_02040 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D Y013_17360 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D Y013_18865 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D Y013_00770 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D Y013_02160 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D Y013_04770 phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D Y013_04765 phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D Y013_04690 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Y013_08040 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D Y013_08475 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D Y013_19680 HIT family hydrolase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D Y013_24335 HIT family hydrolase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D Y013_04065 SAM-dependent methlyltransferase K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220] D Y013_11635 tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D Y013_08435 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D Y013_01315 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D Y013_06855 cysteine desulfarase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Y013_24575 hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D Y013_01565 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D Y013_00390 segregation protein A K01008 selD; selenide, water dikinase [EC:2.7.9.3] D Y013_24495 2', 3'-cyclic nucleotide 2'-phosphodiesterase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D Y013_16485 ribonuclease P K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D Y013_06140 bacterial RNase P K01978 rnpB; M1 RNA D Y013_00150 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56] D Y013_01930 3'-5' exonuclease K03684 rnd; ribonuclease D [EC:3.1.13.5] D Y013_07510 prolyl-tRNA synthetase K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-] D Y013_17855 CMP deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D Y013_01545 (dimethylallyl)adenosine tRNA methylthiotransferase K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D Y013_01025 tRNA (guanine-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D Y013_08115 RNA methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D Y013_04775 RNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family D Y013_04040 pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D Y013_20225 pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D Y013_21995 pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D Y013_06850 thiouridylase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D Y013_19935 glycine cleavage system protein T K06980 ygfZ; tRNA-modifying protein YgfZ D Y013_17965 queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D Y013_18675 tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D Y013_08300 hypothetical protein K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D Y013_08290 O-sialoglycoprotein endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D Y013_08305 ATP-binding protein K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D Y013_01350 polynucleotide phosphorylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:rpy03012] D Y013_01280 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D Y013_04790 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D Y013_01120 elongation factor Ts K02357 tsf; elongation factor Ts D Y013_08910 elongation factor Tu K02358 tuf; elongation factor Tu D Y013_08915 elongation factor G K02355 fusA; elongation factor G D Y013_24195 elongation factor G K02355 fusA; elongation factor G D Y013_00405 translation elongation factor K03833 selB; selenocysteine-specific elongation factor D Y013_24560 peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D Y013_01130 ribosome recycling factor K02838 frr; ribosome recycling factor D Y013_16910 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D Y013_24570 modification methylase HemK K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D Y013_09660 methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D Y013_21535 peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D Y013_08470 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D Y013_02355 elongation factor P K02356 efp; elongation factor P D Y013_07255 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2 D Y013_21525 peptide chain release factor 3 K02837 prfC; peptide chain release factor 3 C 03110 Chaperones and folding catalysts [BR:rpy03110] D Y013_14795 protein disaggregation chaperone K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D Y013_10675 protein disaggregation chaperone K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D Y013_18760 ATP-dependent Clp protease ATP-binding protein K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC D Y013_20285 ATPase AAA K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC D Y013_00600 ATP-dependent protease K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D Y013_14095 heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG D Y013_09975 heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG D Y013_14910 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D Y013_10790 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D Y013_15015 molecular chaperone K04044 hscA; molecular chaperone HscA D Y013_10895 molecular chaperone K04044 hscA; molecular chaperone HscA D Y013_03330 molecular chaperone DnaK K04044 hscA; molecular chaperone HscA D Y013_14080 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Y013_09960 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Y013_08275 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Y013_06455 molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D Y013_14900 molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D Y013_10780 molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D Y013_03335 hypothetical protein K03687 GRPE; molecular chaperone GrpE D Y013_14905 molecular chaperone GrpE K03687 GRPE; molecular chaperone GrpE D Y013_10785 molecular chaperone GrpE K03687 GRPE; molecular chaperone GrpE D Y013_15705 hypothetical protein K13993 HSP20; HSP20 family protein D Y013_20730 RNA-binding protein S4 K04762 hslR; ribosome-associated heat shock protein Hsp15 D Y013_08280 molecular chaperone GroES K04078 groES; chaperonin GroES D Y013_22950 serine protease K04771 degP; serine protease Do [EC:3.4.21.107] D Y013_18685 cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D Y013_24590 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D Y013_16605 hypothetical protein K09796 pccA; periplasmic copper chaperone A D Y013_08395 serine protease K14743 mycP; membrane-anchored mycosin MYCP [EC:3.4.21.-] D Y013_16640 peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D Y013_02145 cyclophilin K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D Y013_02150 peptidyl-prolyl cis-trans isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D Y013_05080 thioredoxin K03671 TXN; thioredoxin D Y013_16445 thioredoxin K03671 TXN; thioredoxin D Y013_00085 hypothetical protein K05838 ybbN; putative thioredoxin C 04131 Membrane trafficking [BR:rpy04131] D Y013_00785 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D Y013_17180 membrane protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family D Y013_05900 arsenic ABC transporter ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D Y013_03640 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Y013_02540 gapA; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Y013_09450 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D Y013_05305 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Y013_14095 heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG D Y013_09975 heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG D Y013_00315 membrane protein K06902 UMF1; MFS transporter, UMF1 family C 04121 Ubiquitin system [BR:rpy04121] D Y013_04090 ubiquitin K13570 pup; prokaryotic ubiquitin-like protein Pup C 03051 Proteasome [BR:rpy03051] D Y013_14095 heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG D Y013_09975 heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG D Y013_04100 proteasome subunit alpha K03432 psmA; proteasome alpha subunit [EC:3.4.25.1] D Y013_04095 proteasome subunit beta K03433 psmB; proteasome beta subunit [EC:3.4.25.1] D Y013_04075 ATPase AAA K13527 mpa; proteasome-associated ATPase D Y013_04110 Pup--protein ligase K13571 pafA; proteasome accessory factor A [EC:6.3.1.19] D Y013_04115 transcriptional regulator K13572 pafB; proteasome accessory factor B D Y013_04120 protein pafC K13573 pafC; proteasome accessory factor C D Y013_04085 Pup deamidase/depupylase K20814 dop; Pup amidohydrolase [EC:3.5.1.119] C 03032 DNA replication proteins [BR:rpy03032] D Y013_12360 ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D Y013_17805 DNA methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Y013_06655 DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D Y013_16495 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D Y013_15895 DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D Y013_06340 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D Y013_15910 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D Y013_05665 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Y013_16500 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Y013_06570 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Y013_18580 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Y013_05935 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Y013_25660 exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Y013_12155 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Y013_23535 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Y013_18075 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Y013_06160 RNase H K22316 rhnA-cobC; ribonuclease H / adenosylcobalamin/alpha-ribazole phosphatase [EC:3.1.26.4 3.1.3.73] D Y013_01055 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D Y013_05085 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Y013_06840 NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D Y013_16555 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D Y013_16515 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D Y013_18565 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:rpy03036] D Y013_17805 DNA methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Y013_00935 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D Y013_18750 hypothetical protein K26249 lsr2; nucleoid-associated protein Lsr2 D Y013_06655 DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D Y013_16495 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D Y013_09645 DNA polymerase sliding clamp subunit K04047 dps; starvation-inducible DNA-binding protein D Y013_17935 LysR family transcriptional regulator K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor D Y013_07845 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D Y013_00975 chromosome partitioning protein Smc K03529 smc; chromosome segregation protein D Y013_04605 segregation and condensation protein A K05896 scpA; segregation and condensation protein A D Y013_04600 S-(hydroxymethyl)glutathione dehydrogenase K06024 scpB; segregation and condensation protein B D Y013_07240 cell division protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D Y013_05785 cell division protein FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D Y013_01440 cell division protein FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D Y013_05745 cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ D Y013_05760 cell division protein FtsW K03588 ftsW; cell division protein FtsW D Y013_07235 cell division protein FtsX K09811 ftsX; cell division transport system permease protein D Y013_05740 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D Y013_01990 ATPase K06916 zapE; cell division protein ZapE D Y013_01385 AFG1 family ATPase K06916 zapE; cell division protein ZapE D Y013_16450 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Y013_05725 cell division protein SepF K09772 sepF; cell division inhibitor SepF D Y013_24015 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D Y013_04610 hypothetical protein K03496 parA; chromosome partitioning protein D Y013_23405 cobyrinic acid a,c-diamide synthase K03496 parA; chromosome partitioning protein D Y013_16465 chromosome partitioning protein K03496 parA; chromosome partitioning protein D Y013_07465 plasmid partitioning protein ParA K03496 parA; chromosome partitioning protein D Y013_12710 peptide transporter K03496 parA; chromosome partitioning protein D Y013_26265 hypothetical protein K03496 parA; chromosome partitioning protein D Y013_16460 chromosome partitioning protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Y013_16470 16S rRNA methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D Y013_01100 tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC D Y013_25150 integrase K03733 xerC; integrase/recombinase XerC D Y013_24945 DNA recombinase K03733 xerC; integrase/recombinase XerC D Y013_04615 tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD D Y013_04400 recombinase K04763 xerD; integrase/recombinase XerD D Y013_22960 sodium:proton antiporter K03593 mrp; ATP-binding protein involved in chromosome partitioning D Y013_02535 sporulation protein K09762 whiA; cell division protein WhiA C 03400 DNA repair and recombination proteins [BR:rpy03400] D Y013_13135 methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D Y013_13145 methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D Y013_16960 deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D Y013_00880 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D Y013_04695 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] D Y013_18810 adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D Y013_18460 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D Y013_20435 helicase K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] D Y013_22775 DNA mismatch repair protein MutT K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D Y013_14260 NTP pyrophosphohydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D Y013_10140 NTP pyrophosphohydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D Y013_17330 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D Y013_01865 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D Y013_19725 alkylated DNA repair protein K03919 alkB; DNA oxidative demethylase [EC:1.14.11.33] D Y013_22730 DNA glycosylase K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28] D Y013_17075 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D Y013_22810 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D Y013_13130 DNA-3-methyladenine glycosylase K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D Y013_22910 DNA-3-methyladenine glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D Y013_00940 5-hydroxymethyluracil DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D Y013_21070 DNA lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D Y013_00545 DNA glycosylase K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18] D Y013_07875 DNA glycosylase K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18] D Y013_14205 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D Y013_10085 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D Y013_08045 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D Y013_08185 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D Y013_23240 endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D Y013_06840 NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D Y013_05085 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Y013_04800 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D Y013_04950 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D Y013_02520 excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D Y013_21130 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Y013_07330 ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Y013_07360 ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Y013_25945 DNA helicase UvrD K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Y013_09015 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D Y013_09010 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D Y013_08445 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D Y013_02415 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D Y013_21625 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D Y013_21920 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D Y013_21915 exodeoxyribonuclease K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D Y013_05665 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Y013_16500 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Y013_06570 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Y013_18580 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Y013_05935 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Y013_25660 exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Y013_12155 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Y013_23535 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Y013_18075 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Y013_15910 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D Y013_17800 DNA mismatch repair protein K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-] D Y013_22095 ATPase AAA K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D Y013_22090 exodeoxyribonuclease V subunit gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] D Y013_22100 recombinase RecD K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D Y013_01515 recombinase RecA K03553 recA; recombination protein RecA D Y013_02105 Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D Y013_02110 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D Y013_02100 Holliday junction resolvase K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D Y013_02430 primosome assembly protein PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D Y013_21950 ATP-dependent dsDNA exonuclease SbcC K03546 sbcC; DNA repair protein SbcC/Rad50 D Y013_21945 exonuclease SbcD K03547 sbcD; DNA repair protein SbcD/Mre11 D Y013_18840 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms D Y013_16505 recombinase RecF K03629 recF; DNA replication and repair protein RecF D Y013_00900 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D Y013_06395 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D Y013_18210 recombinase RecR K06187 recR; recombination protein RecR D Y013_04640 DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D Y013_00305 ATPase K06915 herA; DNA double-strand break repair helicase HerA and related ATPase D Y013_02700 DNA repair protein K10979 ku; DNA end-binding protein Ku D Y013_03425 ATP-dependent DNA ligase K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] D Y013_20910 ATP-dependent DNA ligase K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] D Y013_16555 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D Y013_16515 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D Y013_18565 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D Y013_06655 DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D Y013_00855 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D Y013_02225 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D Y013_18835 DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D Y013_05700 DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D Y013_24095 DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D Y013_01620 LexA family transcriptional regulator K01356 lexA; repressor LexA [EC:3.4.21.88] D Y013_05130 LexA family transcriptional regulator K01356 lexA; repressor LexA [EC:3.4.21.88] D Y013_08195 DNA-directed DNA polymerase K14161 imuB; protein ImuB D Y013_08130 DNA polymerase K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7] D Y013_01520 recombination protein RecX K03565 recX; regulatory protein D Y013_00110 ATP-dependent helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] D Y013_07870 DEAD/DEAH box helicase K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] D Y013_06650 8-oxo-dGTP diphosphatase K23258 mutT1; 8-oxo-(d)GTP phosphatase [EC:3.6.1.69] D Y013_04620 ADP-ribose pyrophosphatase K01554 K01554; 8-oxo-dGDP phosphatase [EC:3.6.1.58] D Y013_10300 Vitamin B12-dependent ribonucleotide reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Y013_06985 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Y013_14420 Vitamin B12-dependent ribonucleotide reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Y013_06980 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D Y013_16615 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D Y013_01295 phosphoesterase K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] C 03029 Mitochondrial biogenesis [BR:rpy03029] D Y013_01280 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D Y013_04790 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D Y013_01120 elongation factor Ts K02357 tsf; elongation factor Ts D Y013_08910 elongation factor Tu K02358 tuf; elongation factor Tu D Y013_08915 elongation factor G K02355 fusA; elongation factor G D Y013_24195 elongation factor G K02355 fusA; elongation factor G D Y013_06415 GTPase Era K03595 era; GTPase D Y013_04690 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Y013_16330 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Y013_02255 aspS; aspartyl-tRNA synthase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Y013_06365 glycine-tRNA synthetase subunit beta K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D Y013_24525 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Y013_19060 amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D Y013_06795 glutamyl-tRNA amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D Y013_25560 glutamyl-tRNA amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D Y013_08600 amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D Y013_17840 amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D Y013_06765 aspartyl/glutamyl-tRNA amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D Y013_06800 glutamyl-tRNA amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D Y013_15910 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D Y013_14910 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D Y013_10790 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D Y013_03335 hypothetical protein K03687 GRPE; molecular chaperone GrpE D Y013_14905 molecular chaperone GrpE K03687 GRPE; molecular chaperone GrpE D Y013_10785 molecular chaperone GrpE K03687 GRPE; molecular chaperone GrpE D Y013_14080 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Y013_09960 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Y013_08275 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Y013_08280 molecular chaperone GroES K04078 groES; chaperonin GroES D Y013_06455 molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D Y013_14900 molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D Y013_10780 molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D Y013_06855 cysteine desulfarase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Y013_22960 sodium:proton antiporter K03593 mrp; ATP-binding protein involved in chromosome partitioning D Y013_02630 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D Y013_02645 membrane protein K02259 COX15; heme a synthase [EC:1.17.99.9] D Y013_16480 preprotein translocase subunit YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D Y013_14095 heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG D Y013_09975 heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:rpy02000] D Y013_17920 multidrug ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D Y013_17925 multidrug ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D Y013_19750 multidrug ABC transporter ATPase K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D Y013_23105 ABC transporter K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D Y013_19960 ABC transporter ATP-binding protein K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC D Y013_19955 cysteine ABC transporter ATP-binding protein K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD D Y013_13500 ABC transporter K18230 tylC; macrolide transport system ATP-binding/permease protein D Y013_21470 glycerophosphoryl diester phosphodiesterase K15738 uup; ABC transport system ATP-binding/permease protein D Y013_06530 sulfate ABC transporter substrate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D Y013_06525 sulfate ABC transporter permease K02046 cysU; sulfate/thiosulfate transport system permease protein D Y013_06520 sulfate ABC transporter K02047 cysW; sulfate/thiosulfate transport system permease protein D Y013_06515 sulfate ABC transporter ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D Y013_16385 molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein D Y013_16380 molybdate ABC transporter permease K02018 modB; molybdate transport system permease protein D Y013_16375 molybdenum ABC transporter ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D Y013_20455 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D Y013_16790 nitrate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D Y013_20460 nitrate ABC transporter permease K15554 ssuC; sulfonate transport system permease protein D Y013_16780 nitrate ABC transporter permease K15554 ssuC; sulfonate transport system permease protein D Y013_20465 sulfonate ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D Y013_16775 sulfonate ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D Y013_07930 iron ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D Y013_07925 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein D Y013_07920 ABC transporter K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D Y013_23070 amino acid ABC transporter substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein D Y013_15785 glycine/betaine ABC transporter substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein D Y013_15795 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein D Y013_15800 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein D Y013_15790 glycine/betaine ABC transporter ATPase K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D Y013_22385 ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D Y013_22445 hypothetical protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D Y013_11750 ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D Y013_21745 ABC transporter permease K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D Y013_20400 ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein D Y013_11755 ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein D Y013_21740 nitrate ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein D Y013_21735 ABC transporter K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D Y013_22390 nitrate ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D Y013_20395 ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D Y013_16070 sugar ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D Y013_23030 ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D Y013_22120 sugar ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D Y013_16065 ABC transporter substrate-binding protein K10236 thuE; trehalose/maltose transport system substrate-binding protein D Y013_23015 ABC transporter substrate-binding protein K10236 thuE; trehalose/maltose transport system substrate-binding protein D Y013_16060 ABC transporter permease K10237 thuF; trehalose/maltose transport system permease protein D Y013_23020 ABC transporter permease K10237 thuF; trehalose/maltose transport system permease protein D Y013_23025 sugar ABC transporter permease K10238 thuG; trehalose/maltose transport system permease protein D Y013_16055 sugar ABC transporter permease K10238 thuG; trehalose/maltose transport system permease protein D Y013_12070 ABC transporter substrate-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein D Y013_12080 glycerol-3-phosphate ABC transporter permease K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein D Y013_12075 glycerol-3-phosphate ABC transporter permease K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein D Y013_12065 ABC transporter ATPase K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10] D Y013_22135 sugar ABC transporter substrate-binding protein K10227 smoE; polyol transport system substrate-binding protein D Y013_22130 sugar ABC transporter permease K10228 smoF; polyol transport system permease protein D Y013_22125 mannitol ABC transporter permease K10229 smoG; polyol transport system permease protein D Y013_22580 hypothetical protein K07335 bmpA; basic membrane protein A and related proteins D Y013_22590 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein D Y013_22585 branched-chain amino acid ABC transporter permease K23536 nupC; general nucleoside transport system permease protein D Y013_22595 ABC transporter K23537 nupA; general nucleoside transport system ATP-binding protein D Y013_17065 hypothetical protein K02069 STAR2; UDP-glucose/iron transport system permease protein D Y013_09030 mammalian cell entry protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D Y013_09035 mammalian cell entry protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D Y013_09045 ABC transporter substrate-binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D Y013_09050 ABC transporter substrate-binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D Y013_19495 Mce family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D Y013_19500 mammalian cell entry protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D Y013_19505 mammalian cell entry protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D Y013_19510 mammalian cell entry protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D Y013_19515 mammalian cell entry protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D Y013_19520 mammalian cell entry protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D Y013_09040 mammalian cell entry protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D Y013_09055 mammalian cell entry protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D Y013_09060 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D Y013_09065 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D Y013_19485 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D Y013_19490 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D Y013_09070 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D Y013_09025 hypothetical protein K18481 mas; Mce-associated membrane protein D Y013_09020 hypothetical protein K18481 mas; Mce-associated membrane protein D Y013_19525 hypothetical protein K18481 mas; Mce-associated membrane protein D Y013_19530 mammalian cell entry protein K18481 mas; Mce-associated membrane protein D Y013_20015 ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D Y013_20020 phosphate ABC transporter permease K02037 pstC; phosphate transport system permease protein D Y013_20025 phosphate ABC transporter permease K02038 pstA; phosphate transport system permease protein D Y013_20030 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D Y013_01535 glutamate-binding protein K10005 gluB; glutamate transport system substrate-binding protein D Y013_01530 glutamate ABC transporter permease K10006 gluC; glutamate transport system permease protein D Y013_01525 glutamate ABC transporter permease K10007 gluD; glutamate transport system permease protein D Y013_01540 artP; arginine ABC transporter ATP-binding protein K10008 gluA; glutamate transport system ATP-binding protein [EC:7.4.2.1] D Y013_05110 amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D Y013_12320 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D Y013_05090 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D Y013_05095 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D Y013_12315 ABC transporter K01995 livG; branched-chain amino acid transport system ATP-binding protein D Y013_05100 ABC transporter K01995 livG; branched-chain amino acid transport system ATP-binding protein D Y013_05105 branched-chain amino acid ABC transporter ATPase K01996 livF; branched-chain amino acid transport system ATP-binding protein D Y013_12310 ABC transporter K01996 livF; branched-chain amino acid transport system ATP-binding protein D Y013_05280 ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein D Y013_05270 metal ABC transporter permease K02072 metI; D-methionine transport system permease protein D Y013_05275 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein D Y013_13905 ABC transporter substrate-binding protein K11959 urtA; urea transport system substrate-binding protein D Y013_09785 ABC transporter substrate-binding protein K11959 urtA; urea transport system substrate-binding protein D Y013_13910 ABC transporter permease K11960 urtB; urea transport system permease protein D Y013_09790 ABC transporter permease K11960 urtB; urea transport system permease protein D Y013_13915 urea ABC transporter permease K11961 urtC; urea transport system permease protein D Y013_09795 urea ABC transporter permease K11961 urtC; urea transport system permease protein D Y013_13920 urea ABC transporter ATP-binding protein K11962 urtD; urea transport system ATP-binding protein D Y013_09800 urea ABC transporter ATP-binding protein K11962 urtD; urea transport system ATP-binding protein D Y013_13925 urea ABC transporter ATP-binding protein K11963 urtE; urea transport system ATP-binding protein D Y013_09805 urea ABC transporter ATP-binding protein K11963 urtE; urea transport system ATP-binding protein D Y013_00020 ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D Y013_05055 ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D Y013_14270 ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D Y013_14355 ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D Y013_10150 ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D Y013_10235 ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D Y013_00025 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D Y013_00030 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D Y013_05050 ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D Y013_14365 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D Y013_10245 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D Y013_00035 glutamate ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D Y013_05045 arginine ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D Y013_10240 arginine ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D Y013_14360 arginine ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D Y013_25345 transporter K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Y013_13870 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Y013_14335 peptide ABC transporter permease K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Y013_10215 peptide ABC transporter permease K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Y013_02130 peptide-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Y013_25340 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D Y013_13865 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D Y013_14330 peptide ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D Y013_10210 peptide ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D Y013_14325 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Y013_10205 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Y013_13860 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Y013_25330 peptide ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D Y013_13855 peptide ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D Y013_14320 glutathione ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D Y013_10200 glutathione ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D Y013_02950 ABC transporter substrate-binding protein K25132 hmuT; heme transport system substrate-binding protein D Y013_02945 ABC transporter permease K25133 hmuU; heme transport system permease protein D Y013_02940 hemin ABC transporter ATP-binding protein K10834 hmuV; heme transport system ATP-binding protein [EC:7.6.2.5] D Y013_05550 ABC transporter substrate-binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein D Y013_05265 iron ABC transporter substrate-binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein D Y013_24070 ABC transporter substrate-binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein D Y013_06960 iron siderophore-binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein D Y013_19775 ABC transporter substrate-binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein D Y013_04425 iron ABC transporter K23186 fepD; iron-siderophore transport system permease protein D Y013_10405 iron ABC transporter permease K23186 fepD; iron-siderophore transport system permease protein D Y013_24075 ABC transporter permease K23186 fepD; iron-siderophore transport system permease protein D Y013_14525 iron ABC transporter permease K23186 fepD; iron-siderophore transport system permease protein D Y013_04430 iron ABC transporter K23187 fepG; iron-siderophore transport system permease protein D Y013_10400 iron-siderophore uptake system transmembrane protein K23187 fepG; iron-siderophore transport system permease protein D Y013_24080 ABC transporter permease K23187 fepG; iron-siderophore transport system permease protein D Y013_14520 iron-siderophore uptake system transmembrane protein K23187 fepG; iron-siderophore transport system permease protein D Y013_04435 iron-enterobactin transporter ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-] D Y013_10395 iron-enterobactin transporter ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-] D Y013_24085 iron-dicitrate ABC transporter ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-] D Y013_14515 iron-enterobactin transporter ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-] D Y013_12340 iron ABC transporter substrate-binding protein K25282 yclQ; iron-siderophore transport system substrate-binding protein D Y013_12350 enterochelin ABC transporter permease K25283 yclO; iron-siderophore transport system permease protein D Y013_12345 iron ABC transporter permease K25284 yclN; iron-siderophore transport system permease protein D Y013_12355 iron ABC transporter ATP-binding protein K25285 yclP; iron-siderophore transport system ATP-binding protein [EC:7.2.2.-] D Y013_14530 ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D Y013_10410 ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D Y013_06965 transporter K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D Y013_06935 iron ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D Y013_14390 ABC transporter substrate-binding protein K25034 btuF; cobalamin transport system substrate-binding protein D Y013_10270 ABC transporter substrate-binding protein K25034 btuF; cobalamin transport system substrate-binding protein D Y013_14385 ABC transporter permease K25027 btuC; cobalamin transport system permease protein D Y013_10265 ABC transporter permease K25027 btuC; cobalamin transport system permease protein D Y013_10260 ABC transporter K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8] D Y013_14380 ABC transporter K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8] D Y013_01335 metal ABC transporter substrate-binding protein K11601 mntC; manganese transport system substrate-binding protein D Y013_01325 membrane protein K11602 mntB; manganese transport system permease protein D Y013_01330 ABC transporter K11603 mntA; manganese transport system ATP-binding protein [EC:7.2.2.5] D Y013_03345 cobalamin biosynthesis protein CbiM K02007 cbiM; cobalt/nickel transport system permease protein D Y013_11725 cobalamin biosynthesis protein CbiM K02007 cbiM; cobalt/nickel transport system permease protein D Y013_01490 biotin biosynthesis protein BioC K03523 bioY; biotin transport system substrate-specific component D Y013_01480 cobalt ABC transporter K16783 bioN; biotin transport system permease protein D Y013_01485 cobalt ABC transporter ATP-binding protein K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-] D Y013_24105 cobalt ABC transporter K16785 ecfT; energy-coupling factor transport system permease protein D Y013_24100 cobalt ABC transporter ATP-binding protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D Y013_18920 ABC transporter permease K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein D Y013_18910 helicase K02075 ABC.ZM.P; zinc/manganese transport system permease protein D Y013_18915 ABC transporter ATP-binding protein K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein D Y013_17595 sugar ABC transporter permease K09690 wzm; homopolymeric O-antigen transport system permease protein D Y013_17695 ABC transporter ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14] D Y013_19180 ABC transporter permease K09813 hrtB; hemin transport system permease protein D Y013_16595 ABC transporter permease K09813 hrtB; hemin transport system permease protein D Y013_16590 ABC transporter ATP-binding protein K09814 hrtA; hemin transport system ATP-binding protein [EC:7.6.2.-] D Y013_19185 ABC transporter ATP-binding protein K09814 hrtA; hemin transport system ATP-binding protein [EC:7.6.2.-] D Y013_24315 hypothetical protein K25149 narB; polyether ionophore transport system permease protein D Y013_24310 tetronasin ABC transporter ATP-binding protein K25150 narA; polyether ionophore transport system ATP-binding protein D Y013_07235 cell division protein FtsX K09811 ftsX; cell division transport system permease protein D Y013_07240 cell division protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D Y013_00240 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D Y013_02650 multidrug ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D Y013_20710 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D Y013_23230 antibiotic ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D Y013_13995 membrane protein K01992 ABC-2.P; ABC-2 type transport system permease protein D Y013_14225 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D Y013_09875 membrane protein K01992 ABC-2.P; ABC-2 type transport system permease protein D Y013_08615 antibiotic transporter K01992 ABC-2.P; ABC-2 type transport system permease protein D Y013_08620 peptide ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D Y013_10105 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D Y013_18985 ABC transporter K01992 ABC-2.P; ABC-2 type transport system permease protein D Y013_23110 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D Y013_18980 ABC transporter K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Y013_00245 ABC transporter K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Y013_02655 spermidine/putrescine ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Y013_20715 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Y013_23225 multidrug ABC transporter ATPase K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Y013_14000 sulfate ABC transporter ATPase K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Y013_14230 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Y013_09880 sulfate ABC transporter ATPase K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Y013_10110 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Y013_23115 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Y013_08610 IclR family transcriptional regulator K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Y013_07385 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Y013_23255 membrane protein K02004 ABC.CD.P; putative ABC transport system permease protein D Y013_07705 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein D Y013_23250 peptide ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Y013_07710 peptide ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Y013_02680 iron ABC transporter ATP-binding protein K09013 sufC; Fe-S cluster assembly ATP-binding protein D Y013_15835 membrane protein K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7 D Y013_02470 transporter K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5 D Y013_01300 multidrug transporter MatE K26937 dinF; MATE family, multidrug efflux pump D Y013_01925 major facilitator transporter K08139 HXT; MFS transporter, SP family, sugar:H+ symporter D Y013_04310 major facilitator transporter K03761 kgtP; MFS transporter, MHS family, alpha-ketoglutarate permease D Y013_17250 MFS transporter K03761 kgtP; MFS transporter, MHS family, alpha-ketoglutarate permease D Y013_11995 amino acid transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter D Y013_00365 MFS transporter K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter D Y013_13605 MFS transporter K05548 benK; MFS transporter, AAHS family, benzoate transport protein D Y013_23830 hypothetical protein K05548 benK; MFS transporter, AAHS family, benzoate transport protein D Y013_13480 MFS transporter K26744 vanK; MFS transporter, AAHS family, vanillate permease D Y013_24040 MFS transporter K03449 MFS.CP; MFS transporter, CP family, cyanate transporter D Y013_01355 MFS transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D Y013_07420 major facilitator transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D Y013_19790 major facilitator transporter K08225 entS; MFS transporter, ENTS family, enterobactin (siderophore) exporter D Y013_01095 MFS transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D Y013_22335 transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D Y013_03445 MFS transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein D Y013_17960 MFS transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein D Y013_16720 hypothetical protein K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein D Y013_17890 MFS transporter K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein D Y013_05545 major facilitator transporter K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein D Y013_19620 major facilitator transporter K18926 lmrB; MFS transporter, DHA2 family, lincomycin resistance protein D Y013_00315 membrane protein K06902 UMF1; MFS transporter, UMF1 family D Y013_22520 membrane protein K08369 ydjE; MFS transporter, putative metabolite:H+ symporter D Y013_01605 phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D Y013_01585 HPr kinase K02784 ptsH; phosphocarrier protein HPr D Y013_08670 hypothetical protein K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D Y013_01590 PTS lactose transporter subunit IIC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D Y013_06560 aquaporin Z K06188 aqpZ; aquaporin Z D Y013_03600 NAD-binding protein of Kef-type K+ transporter K10716 kch; voltage-gated potassium channel D Y013_07345 NAD-binding protein of Kef-type K+ transporter K10716 kch; voltage-gated potassium channel D Y013_00655 ammonia channel protein K03320 amt; ammonium transporter, Amt family D Y013_00985 ammonium transporter K03320 amt; ammonium transporter, Amt family D Y013_22635 hypothetical protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D Y013_02745 membrane protein K07114 yfbK; Ca-activated chloride channel homolog D Y013_21285 large conductance mechanosensitive channel protein MscL K03282 mscL; large conductance mechanosensitive channel D Y013_21355 large conductance mechanosensitive channel protein MscL K03282 mscL; large conductance mechanosensitive channel D Y013_07250 mechanosensitive ion channel protein MscS K22044 ybiO; moderate conductance mechanosensitive channel D Y013_21845 mechanosensitive ion channel protein MscS K22044 ybiO; moderate conductance mechanosensitive channel D Y013_18885 magnesium transporter K06213 mgtE; magnesium transporter D Y013_21775 magnesium transporter K03284 corA; magnesium transporter D Y013_23050 magnesium transporter CorA K03284 corA; magnesium transporter D Y013_11430 chromosome condensation protein CrcB K06199 crcB; fluoride exporter D Y013_11435 chromosome condensation protein CrcB K06199 crcB; fluoride exporter D Y013_04470 membrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D Y013_06420 membrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D Y013_02205 membrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D Y013_04465 membrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D Y013_02210 membrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D Y013_22865 amino acid transporter K16237 aroP; aromatic amino acid permease D Y013_03845 ethanolamine transporter K16238 eat; ethanolamine permease D Y013_14700 cation transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein D Y013_10580 cation transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein D Y013_03735 ZIP family metal transporter K07238 TC.ZIP; zinc transporter, ZIP family D Y013_08165 hypothetical protein K20470 mmpL3; trehalose monomycolate/heme transporter D Y013_11645 hypothetical protein K20470 mmpL3; trehalose monomycolate/heme transporter D Y013_19605 ligand-binding protein SH3 K11741 sugE; quaternary ammonium compound-resistance protein SugE D Y013_18315 membrane protein K15268 eamA; O-acetylserine/cysteine efflux transporter D Y013_08965 membrane protein K11939 rhtA; inner membrane transporter RhtA D Y013_05670 protein rarD K05786 rarD; chloramphenicol-sensitive protein RarD D Y013_20945 membrane protein K09771 TC.SMR3; small multidrug resistance family-3 protein D Y013_03475 lactate permease K03303 lutP; lactate permease D Y013_19685 lactate transporter LctP family protein K03303 lutP; lactate permease D Y013_19965 multidrug DMT transporter permease K02168 betT; choline/glycine/proline betaine transport protein D Y013_20840 acetate permease K14393 actP; cation/acetate symporter D Y013_13780 sodium:solute symporter K14393 actP; cation/acetate symporter D Y013_19825 C4-dicarboxylate ABC transporter K11103 dctA; aerobic C4-dicarboxylate transport protein D Y013_03460 nhaA; sodium:proton antiporter K03313 nhaA; Na+:H+ antiporter, NhaA family D Y013_18490 nhaA; sodium:proton antiporter K03313 nhaA; Na+:H+ antiporter, NhaA family D Y013_20805 sodium:proton antiporter K24163 nhaK; monovalent cation/hydrogen antiporter D Y013_15975 sodium/hydrogen exchanger K24160 NHA1; sodium/hydrogen antiporter D Y013_01765 potassium transporter TrkA K07228 khtT; K+:H+ antiporter subunit KhtT D Y013_01770 potassium transporter K26732 khtU; K+:H+ antiporter subunit KhtU D Y013_01890 potassium transporter TrkA K03499 trkA; trk/ktr system potassium uptake protein D Y013_01895 potassium transporter TrkA K03499 trkA; trk/ktr system potassium uptake protein D Y013_22565 uracil permease K24206 uacT; uric acid transporter D Y013_20540 MFS transporter K06901 pbuG; adenine/guanine/hypoxanthine permease D Y013_13615 benzoate transporter K05782 benE; benzoate membrane transport protein D Y013_12660 benzoate transporter K05782 benE; benzoate membrane transport protein D Y013_01080 voltage-gated chloride channel K03281 clcA; chloride channel protein, CIC family D Y013_20810 sulfate permease K03321 TC.SULP; sulfate permease, SulP family D Y013_05900 arsenic ABC transporter ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D Y013_26120 arsenic transporter K03325 ACR3; arsenite transporter D Y013_15865 arsenic transporter K03325 ACR3; arsenite transporter D Y013_14145 cation:proton antiporter K05565 mnhA; multicomponent Na+:H+ antiporter subunit A D Y013_10025 cation:proton antiporter K05565 mnhA; multicomponent Na+:H+ antiporter subunit A D Y013_14150 cation:proton antiporter K05567 mnhC; multicomponent Na+:H+ antiporter subunit C D Y013_10030 cation:proton antiporter K05567 mnhC; multicomponent Na+:H+ antiporter subunit C D Y013_14155 cation:proton antiporter K05568 mnhD; multicomponent Na+:H+ antiporter subunit D D Y013_10035 cation:proton antiporter K05568 mnhD; multicomponent Na+:H+ antiporter subunit D D Y013_14160 cation:proton antiporter K05569 mnhE; multicomponent Na+:H+ antiporter subunit E D Y013_10040 cation:proton antiporter K05569 mnhE; multicomponent Na+:H+ antiporter subunit E D Y013_14165 cation:proton antiporter K05570 mnhF; multicomponent Na+:H+ antiporter subunit F D Y013_10045 cation:proton antiporter K05570 mnhF; multicomponent Na+:H+ antiporter subunit F D Y013_14170 cation:proton antiporter K05571 mnhG; multicomponent Na+:H+ antiporter subunit G D Y013_10050 cation:proton antiporter K05571 mnhG; multicomponent Na+:H+ antiporter subunit G D Y013_16415 peptidoglycan flippase murj K03980 murJ; putative peptidoglycan lipid II flippase D Y013_21210 membrane protein K13936 mdcF; malonate transporter and related proteins D Y013_17940 amino acid transporter K06895 lysE; L-lysine exporter family protein LysE/ArgO D Y013_13665 branched-chain amino acid ABC transporter permease K26605 azlC; branched chain amino acid efflux pump D Y013_13660 branched-chain amino acid ABC transporter K26606 azlD; branched chain amino acid efflux pump D Y013_17970 membrane protein K09125 yhhQ; queuosine precursor transporter D Y013_04340 membrane protein K22736 VIT; vacuolar iron transporter family protein D Y013_05760 cell division protein FtsW K03588 ftsW; cell division protein FtsW D Y013_17180 membrane protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family D Y013_09305 cytochrome C biogenesis protein ResC K06196 ccdA; cytochrome c-type biogenesis protein D Y013_01360 narZ; nitrate reductase A subunit alpha K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-] D Y013_01365 narY; nitrate reductase subunit beta K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-] D Y013_01375 nitrate reductase subunit gamma K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-] D Y013_01960 biotin transporter BioY K08351 bisC; biotin/methionine sulfoxide reductase [EC:1.-.-.-] D Y013_10905 protein tyrosine kinase K25588 K25588; tyrosine-protein kinase [EC:2.7.10.3] D Y013_15025 protein tyrosine kinase K25588 K25588; tyrosine-protein kinase [EC:2.7.10.3] D Y013_24050 nicotinamide mononucleotide transporter K03811 pnuC; nicotinamide mononucleotide transporter D Y013_11670 membrane protein K20468 K20468; putative heme transporter D Y013_20185 membrane protein K20468 K20468; putative heme transporter D Y013_13825 TspO and MBR s K05770 TSPO; translocator protein D Y013_22675 5-hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17] D Y013_17080 copper resistance protein CopD K07245 pcoD; copper resistance protein D D Y013_17085 copper resistance protein C K07156 copC; copper resistance protein C C 02044 Secretion system [BR:rpy02044] D Y013_02320 type IV prepilin leader peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D Y013_18520 conjugal transfer protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D Y013_18525 secretion protein F K12510 tadB; tight adherence protein B D Y013_05720 hypothetical protein K02221 yggT; YggT family protein D Y013_06580 competence protein ComEA K02237 comEA; competence protein ComEA D Y013_06575 competence protein ComEC K02238 comEC; competence protein ComEC D Y013_08400 MPSS family PPE41 protein secretion system protein K27085 eccB; ESX secretion system ATPase EccB D Y013_08380 secretion protein EccC K27086 eccC; ESX secretion system protein EccC D Y013_08390 membrane protein K27087 eccD; ESX secretion system protein EccD D Y013_08405 hypothetical protein K27088 eccE; ESX secretion system protein EccE D Y013_08395 serine protease K14743 mycP; membrane-anchored mycosin MYCP [EC:3.4.21.-] D Y013_13345 hypothetical protein K27091 espG; ESX secretion-associated protein EspG D Y013_08370 hypothetical protein K14956 esx; ESAT-6 family protein D Y013_08365 hypothetical protein K14956 esx; ESAT-6 family protein D Y013_07565 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Y013_02120 preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D Y013_09100 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D Y013_02125 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D Y013_02555 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D Y013_08490 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D Y013_01000 signal recognition particle K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D Y013_00980 cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor D Y013_02115 protein-export membrane protein YajC K03210 yajC; preprotein translocase subunit YajC D Y013_16480 preprotein translocase subunit YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D Y013_04125 preprotein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA D Y013_22955 preprotein translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB D Y013_04130 preprotein translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC C 02042 Bacterial toxins [BR:rpy02042] D Y013_04470 membrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D Y013_06420 membrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D Y013_02205 membrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D Y013_04465 membrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D Y013_02210 membrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D Y013_21850 membrane protein K11068 hlyIII; hemolysin III C 02022 Two-component system [BR:rpy02022] D Y013_09445 histidine kinase K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3] D Y013_09440 XRE family transcriptional regulator K07776 regX3; two-component system, OmpR family, response regulator RegX3 D Y013_25420 histidine kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D Y013_25425 transcriptional regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D Y013_21250 ATP-binding protein K07653 mprB; two-component system, OmpR family, sensor histidine kinase MprB [EC:2.7.13.3] D Y013_21245 transcriptional regulator K07669 mprA; two-component system, OmpR family, response regulator MprA D Y013_07585 sensor histidine kinase K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3] D Y013_07590 XRE family transcriptional regulator K07670 mtrA; two-component system, OmpR family, response regulator MtrA D Y013_15165 ATP-binding protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D Y013_02460 ATP-binding protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D Y013_11045 ATP-binding protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D Y013_15170 transcriptional regulator K02483 K02483; two-component system, OmpR family, response regulator D Y013_11050 transcriptional regulator K02483 K02483; two-component system, OmpR family, response regulator D Y013_02465 transcriptional regulator K02483 K02483; two-component system, OmpR family, response regulator D Y013_18640 transcriptional regulator K02483 K02483; two-component system, OmpR family, response regulator D Y013_21040 histidine kinase K07682 devS; two-component system, NarL family, sensor histidine kinase DevS [EC:2.7.13.3] D Y013_21035 LuxR family transcriptional regulator K07695 devR; two-component system, NarL family, response regulator DevR D Y013_20425 histidine kinase K02476 K02476; two-component system, CitB family, sensor kinase [EC:2.7.13.3] D Y013_20815 histidine kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3] D Y013_03830 histidine kinase K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3] D Y013_07490 ATPase K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3] D Y013_05115 transcriptional regulator K22010 pdtaR; two-component system, response regulator PdtaR C 02035 Bacterial motility proteins [BR:rpy02035] D Y013_02320 type IV prepilin leader peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D Y013_18520 conjugal transfer protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:rpy04812] D Y013_24015 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D Y013_05740 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D Y013_04610 hypothetical protein K03496 parA; chromosome partitioning protein D Y013_23405 cobyrinic acid a,c-diamide synthase K03496 parA; chromosome partitioning protein D Y013_16465 chromosome partitioning protein K03496 parA; chromosome partitioning protein D Y013_07465 plasmid partitioning protein ParA K03496 parA; chromosome partitioning protein D Y013_12710 peptide transporter K03496 parA; chromosome partitioning protein D Y013_26265 hypothetical protein K03496 parA; chromosome partitioning protein D Y013_16460 chromosome partitioning protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:rpy04147] D Y013_14095 heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG D Y013_09975 heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG D Y013_21695 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Y013_03640 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Y013_02540 gapA; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Y013_02545 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D Y013_05305 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Y013_16640 peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D Y013_14080 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Y013_09960 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Y013_08275 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Y013_14910 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D Y013_10790 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D Y013_21115 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Y013_12040 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Y013_23805 hypothetical protein K01053 gnl; gluconolactonase [EC:3.1.1.17] D Y013_08240 inosine 5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D Y013_08245 inosine-5`-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D Y013_08910 elongation factor Tu K02358 tuf; elongation factor Tu D Y013_19680 HIT family hydrolase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D Y013_24335 HIT family hydrolase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D Y013_01965 lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D Y013_15835 membrane protein K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7 D Y013_07130 acyl-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Y013_03885 acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Y013_24255 acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Y013_23190 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Y013_16980 AMP-dependent synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Y013_15540 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Y013_23155 acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Y013_03250 AMP-dependent synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Y013_19150 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_19210 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_00075 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_00620 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_13405 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_11485 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_19405 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_24230 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_18180 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_19375 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_21490 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Y013_07600 S-adenosyl-L-homocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D Y013_08485 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D Y013_02135 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D Y013_04710 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D Y013_04715 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D Y013_06630 cystathionine gamma-lyase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1] D Y013_13080 fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2] D Y013_14760 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D Y013_10640 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D Y013_00095 glycogen branching protein K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D Y013_07905 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D Y013_00695 glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Y013_06070 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Y013_06095 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Y013_25885 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Y013_25890 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Y013_09345 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D Y013_13200 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D Y013_22770 pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D Y013_06715 3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D Y013_21170 purH; purine biosynthesis protein purH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D Y013_13970 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Y013_09850 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Y013_12640 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Y013_06870 electron transfer flavoprotein subunit alpha K03522 fixB; electron transfer flavoprotein alpha subunit D Y013_23615 glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D Y013_02615 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D Y013_02550 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D Y013_09450 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D Y013_16940 lipocalin K03098 APOD; apolipoprotein D and lipocalin family protein C 02048 Prokaryotic defense system [BR:rpy02048] D Y013_17645 restriction endonuclease subunit R K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D Y013_24720 hypothetical protein K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D Y013_17615 type I restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D Y013_24715 hypothetical protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D Y013_17610 DNA methyltransferase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D Y013_24710 restriction endonuclease subunit M K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D Y013_17805 DNA methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Y013_01800 HNH endonuclease K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-] D Y013_22740 restriction endonuclease K07448 mrr; restriction system protein D Y013_25700 toxin RelE K06218 relE; mRNA interferase RelE/StbE D Y013_19710 plasmid stabilization protein K06218 relE; mRNA interferase RelE/StbE D Y013_16205 toxin YoeB K19158 yoeB; toxin YoeB [EC:3.1.-.-] D Y013_03015 antitoxin K19159 yefM; antitoxin YefM D Y013_16210 antitoxin K19159 yefM; antitoxin YefM D Y013_25695 antitoxin K19159 yefM; antitoxin YefM D Y013_19705 prevent-host-death protein K19159 yefM; antitoxin YefM D Y013_14065 PspC family transcriptional regulator K03973 pspC; phage shock protein C D Y013_09945 PspC family transcriptional regulator K03973 pspC; phage shock protein C D Y013_05740 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D Y013_24015 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D Y013_06695 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Y013_17985 glutamyl-Q tRNA(Asp) ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Y013_06855 cysteine desulfarase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules [BR:rpy04090] C 01504 Antimicrobial resistance genes [BR:rpy01504] D Y013_13500 ABC transporter K18230 tylC; macrolide transport system ATP-binding/permease protein D Y013_17890 MFS transporter K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein D Y013_05545 major facilitator transporter K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein D Y013_04445 peptidase M48 Ste24p K02172 blaR1; bla regulator protein blaR1 D Y013_04440 transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D Y013_20620 beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6] D Y013_20630 beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6] C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins [BR:rpy00536] D Y013_09580 heparin-binding hemagglutinin K16645 hbhA; heparin binding hemagglutinin HbhA C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:rpy00537] C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:rpy03100] D Y013_16575 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Y013_21325 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Y013_07195 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Y013_07200 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Y013_17765 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Y013_24510 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Y013_20975 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Y013_00415 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Y013_06330 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Y013_20085 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Y013_20095 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Y013_02020 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D Y013_06690 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Y013_21600 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Y013_20080 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Y013_06680 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Y013_06685 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Y013_00575 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Y013_02025 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Y013_02010 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Y013_11350 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Y013_15470 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Y013_00290 tRNA-His K14226 tRNA-His; tRNA His D Y013_16565 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Y013_02905 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Y013_02910 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Y013_16705 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Y013_00210 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Y013_05120 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Y013_21730 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Y013_00270 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Y013_00275 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Y013_20070 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Y013_09125 tRNA-Met K14230 tRNA-Met; tRNA Met D Y013_07285 tRNA-Met K14230 tRNA-Met; tRNA Met D Y013_13370 tRNA-Met K14230 tRNA-Met; tRNA Met D Y013_06325 tRNA-Met K14230 tRNA-Met; tRNA Met D Y013_20090 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D Y013_04580 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Y013_00580 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Y013_18400 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Y013_18025 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Y013_17720 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Y013_17760 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Y013_17860 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Y013_09130 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Y013_18585 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Y013_19565 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Y013_09105 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D Y013_09135 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D Y013_02015 tRNA-Val K14237 tRNA-Val; tRNA Val D Y013_02005 tRNA-Val K14237 tRNA-Val; tRNA Val D Y013_06195 tRNA-Val K14237 tRNA-Val; tRNA Val D Y013_02030 tRNA-Val K14237 tRNA-Val; tRNA Val D Y013_00395 tRNA-Sec K14238 tRNA-Sec; tRNA Sec D Y013_00005 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Y013_17810 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Y013_18600 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Y013_04685 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Y013_04680 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Y013_00010 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Y013_17815 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Y013_18605 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Y013_00015 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Y013_17820 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Y013_18610 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Y013_04675 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Y013_06140 bacterial RNase P K01978 rnpB; M1 RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D Y013_07115 alcohol dehydrogenase K00153 E1.1.1.306; S-(hydroxymethyl)mycothiol dehydrogenase [EC:1.1.1.306] D Y013_17545 short-chain dehydrogenase K16652 dprE2; decaprenylphospho-beta-D-erythro-pentofuranosid-2-ulose 2-reductase [EC:1.1.1.333] D Y013_03440 oxidoreductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346] D Y013_12625 acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha K21416 acoA; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [EC:1.1.1.-] D Y013_12630 pyruvate dehydrogenase subunit beta K21417 acoB; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta [EC:1.1.1.-] D Y013_23170 FAD-linked oxidoreductase K05888 K05888; L-gulono-1,4-lactone dehydrogenase [EC:1.1.2.-] D Y013_12045 glucose-6-phosphate dehydrogenase K15510 fgd1; coenzyme F420-dependent glucose-6-phosphate dehydrogenase [EC:1.1.98.2] D Y013_14290 glucose-6-phosphate dehydrogenase K15510 fgd1; coenzyme F420-dependent glucose-6-phosphate dehydrogenase [EC:1.1.98.2] D Y013_10170 glucose-6-phosphate dehydrogenase K15510 fgd1; coenzyme F420-dependent glucose-6-phosphate dehydrogenase [EC:1.1.98.2] D Y013_20795 N5,N10-methylene tetrahydromethanopterin reductase K15510 fgd1; coenzyme F420-dependent glucose-6-phosphate dehydrogenase [EC:1.1.98.2] D Y013_17550 decaprenylphosphoryl-beta-D-ribose oxidase K16653 dprE1; decaprenylphospho-beta-D-ribofuranose 2-oxidase [EC:1.1.98.3] D Y013_05655 nitroreductase K00540 fqr; F420H(2)-dependent quinone reductase [EC:1.1.98.-] D Y013_19370 nitroreductase K00540 fqr; F420H(2)-dependent quinone reductase [EC:1.1.98.-] D Y013_25445 alcohol dehydrogenase K00119 E1.1.99.36; alcohol dehydrogenase (nicotinoprotein) [EC:1.1.99.36] D Y013_00430 (2Fe-2S)-binding protein K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3] D Y013_12435 (2Fe-2S)-binding protein K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3] D Y013_15745 carbon monoxide dehydrogenase K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3] D Y013_15755 carbon-monoxide dehydrogenase K03519 coxM; aerobic carbon-monoxide dehydrogenase medium subunit [EC:1.2.5.3] D Y013_00425 carbon monoxide dehydrogenase medium subunit K03519 coxM; aerobic carbon-monoxide dehydrogenase medium subunit [EC:1.2.5.3] D Y013_12440 molybdopterin dehydrogenase K03519 coxM; aerobic carbon-monoxide dehydrogenase medium subunit [EC:1.2.5.3] D Y013_15750 aldehyde dehydrogenase K03520 coxL; aerobic carbon-monoxide dehydrogenase large subunit [EC:1.2.5.3] D Y013_00435 carbon monoxide dehydrogenase K03520 coxL; aerobic carbon-monoxide dehydrogenase large subunit [EC:1.2.5.3] D Y013_12430 xanthine dehydrogenase K03520 coxL; aerobic carbon-monoxide dehydrogenase large subunit [EC:1.2.5.3] D Y013_15270 indolepyruvate ferredoxin oxidoreductase K04090 E1.2.7.8; indolepyruvate ferredoxin oxidoreductase [EC:1.2.7.8] D Y013_23890 2-oxoacid ferredoxin oxidoreductase subunit beta K04090 E1.2.7.8; indolepyruvate ferredoxin oxidoreductase [EC:1.2.7.8] D Y013_11150 indolepyruvate ferredoxin oxidoreductase K04090 E1.2.7.8; indolepyruvate ferredoxin oxidoreductase [EC:1.2.7.8] D Y013_04230 prephenate dehydrogenase K24002 cmlC; 4-amino-4-deoxyprephenate dehydrogenase [EC:1.3.1.121] D Y013_13415 2-alkenal reductase K23256 curA; NADPH-dependent curcumin reductase [EC:1.3.1.-] D Y013_18125 aldehyde dehydrogenase K06137 pqqC; pyrroloquinoline-quinone synthase [EC:1.3.3.11] D Y013_08775 radical SAM protein K24696 mftC; [mycofactocin precursor peptide]-tyrosine decarboxylase / 3-amino-5-[(4-hydroxyphenyl)methyl]-4,4-dimethylpyrrolidin-2-one synthase [EC:1.3.98.7 4.1.99.26] D Y013_09155 FAD-linked oxidoreductase K21401 menJ; menaquinone-9 beta-reductase [EC:1.3.99.38] D Y013_19330 acyl-CoA dehydrogenase K22818 fadE26; 3-oxocholest-4-en-26-oyl-CoA dehydrogenase alpha subunit [EC:1.3.99.-] D Y013_19470 acyl-CoA dehydrogenase K22818 fadE26; 3-oxocholest-4-en-26-oyl-CoA dehydrogenase alpha subunit [EC:1.3.99.-] D Y013_19325 acyl-CoA dehydrogenase K22819 fadE27; 3-oxocholest-4-en-26-oyl-CoA dehydrogenase beta subunit [EC:1.3.99.-] D Y013_19465 acyl-CoA dehydrogenase K22819 fadE27; 3-oxocholest-4-en-26-oyl-CoA dehydrogenase beta subunit [EC:1.3.99.-] D Y013_18940 acyl-CoA dehydrogenase K22820 fadE34; 3-oxochol-4-en-24-oyl-CoA dehydrogenase [EC:1.3.99.-] D Y013_18945 acyl-CoA dehydrogenase K22821 fadE28; 3-oxo-4-pregnene-20-carboxyl-CoA dehydrogenase alpha subunit [EC:1.3.99.-] D Y013_18950 acyl-CoA dehydrogenase K22822 fadE29; 3-oxo-4-pregnene-20-carboxyl-CoA dehydrogenase beta subunit [EC:1.3.99.-] D Y013_08770 mycofactocin system heme/flavin oxidoreductase MftD K24693 mftD; pre-mycofactocin synthase [EC:1.4.3.26] D Y013_07910 pyridine nucleotide-disulfide oxidoreductase K23842 lpdA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D Y013_02635 quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D Y013_22430 NADPH:quinone reductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D Y013_23845 hypothetical protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D Y013_13025 nitronate monooxygenase K23948 E1.6.5.9; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] D Y013_17315 nitronate monooxygenase K23948 E1.6.5.9; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] D Y013_18260 nitronate monooxygenase K23948 E1.6.5.9; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] D Y013_01215 mycothione reductase K17883 mtr; mycothione reductase [EC:1.8.1.15] D Y013_16435 NADH:flavin oxidoreductase K22347 nox; 4,4'-dithiodibutanoate disulfide reductase [EC:1.8.1.20] D Y013_11360 alkyl hydroperoxide reductase subunit F K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-] D Y013_15480 alkyl hydroperoxide reductase subunit F K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-] D Y013_05185 methionine sulfoxide reductase A K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D Y013_17200 methionine sulfoxide reductase A K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D Y013_01975 methionine sulfoxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] D Y013_23140 glutathione S-transferase K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7] D Y013_15320 Mn-containing catalase K07217 ydbD; manganese catalase [EC:1.11.1.6] D Y013_11200 Mn-containing catalase K07217 ydbD; manganese catalase [EC:1.11.1.6] D Y013_09485 alpha/beta hydrolase K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10] D Y013_16610 peroxidase K15733 E1.11.1.19; dye decolorizing peroxidase [EC:1.11.1.19] D Y013_00260 peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D Y013_11365 alkyl hydroperoxide reductase subunit C K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26] D Y013_15485 alkyl hydroperoxide reductase subunit C K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26] D Y013_18785 peroxiredoxin K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28] D Y013_20275 Organic hydroperoxide resistance protein ohrA K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28] D Y013_06200 peroxiredoxin K24120 ahpE; mycoredoxin-dependent peroxiredoxin [EC:1.11.1.29] D Y013_19690 peroxidase K07223 yfeX; porphyrinogen peroxidase [EC:1.11.1.-] D Y013_02200 quercetin 2,3-dioxygenase K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D Y013_16265 pirin K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D Y013_03230 pirin K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D Y013_02195 pirin K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D Y013_23420 dioxygenase K22303 atsK; alkyl sulfatase [EC:1.14.11.77] D Y013_21000 hemin transporter K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17] D Y013_09765 hemin transporter K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17] D Y013_19550 lysine/ornithine N-monooxygenase K10531 pvdA; L-ornithine N5-monooxygenase [EC:1.14.13.195 1.14.13.196] D Y013_03820 acyl-CoA dehydrogenase K22027 iacA; indole-3-acetate monooxygenase [EC:1.14.13.235] D Y013_00730 hypothetical protein K22342 dmmA; dimethylamine monooxygenase subunit A [EC:1.14.13.238] D Y013_00740 hypothetical protein K22342 dmmA; dimethylamine monooxygenase subunit A [EC:1.14.13.238] D Y013_00725 ferredoxin K22343 dmmB; dimethylamine monooxygenase subunit B [EC:1.14.13.238] D Y013_00735 hypothetical protein K22344 dmmC; dimethylamine monooxygenase subunit C [EC:1.14.13.238] D Y013_00720 hypothetical protein K22344 dmmC; dimethylamine monooxygenase subunit C [EC:1.14.13.238] D Y013_18800 monooxygenase K21481 mhuD; heme oxygenase (mycobilin-producing) [EC:1.14.99.57] D Y013_04225 hypothetical protein K24704 cmlI; alpha-N-dichloroacetyl-p-aminophenylserinol N-oxygenase [EC:1.14.99.67] D Y013_08995 ferredoxin K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D Y013_14410 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D Y013_10290 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D Y013_12120 ferredoxin K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D Y013_22405 ferredoxin--NADP reductase K21567 fnr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D Y013_21350 arsenate reductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1] D Y013_07335 glutaredoxin K18917 mrx1; mycoredoxin [EC:1.20.4.3] D Y013_03710 membrane protein K18917 mrx1; mycoredoxin [EC:1.20.4.3] D Y013_15870 heat-shock protein HtpX K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4] D Y013_26125 heat-shock protein HtpX K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4] D Y013_18190 cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D Y013_20115 hypothetical protein K24288 meT1; MMP 1-O-methyltransferase [EC:2.1.1.365] D Y013_04180 maltose O-acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79] D Y013_22115 maltose O-acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79] D Y013_20010 mycothiol acetyltransferase K15520 mshD; mycothiol synthase [EC:2.3.1.189] D Y013_04215 apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D Y013_06590 lysophospholipase K22797 octT; diglucosylglycerate octanoyltransferase [EC:2.3.1.273] D Y013_09550 acetyltransferase K03824 yhbS; putative acetyltransferase [EC:2.3.1.-] D Y013_11530 acyltransferase K27307 tmaT; acetyltransferase [EC:2.3.1.-] D Y013_20515 glutaminyl-peptide cyclotransferase K22757 QCT; glutaminyl-peptide cyclotransferase [EC:2.3.2.5] D Y013_09480 D-inositol 3-phosphate glycosyltransferase K15521 mshA; D-inositol-3-phosphate glycosyltransferase [EC:2.4.1.250] D Y013_05315 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D Y013_21110 membrane-associated lipoprotein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D Y013_00895 dihydroxyacetone kinase K07030 fakA; fatty acid kinase [EC:2.7.2.18] D Y013_06090 glutamine-synthetase adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89] D Y013_18825 DNA integrity scanning protein DisA K07067 disA; diadenylate cyclase [EC:2.7.7.85] D Y013_03010 hypothetical protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108] D Y013_24060 phosphoenolpyruvate synthase K22579 rph; rifampicin phosphotransferase [EC:2.7.9.6] D Y013_19445 CoA transferase K18313 sct; succinyl-CoA---D-citramalate CoA-transferase [EC:2.8.3.20] D Y013_26135 arsenate reductase K18701 arsC; arsenate-mycothiol transferase [EC:2.8.4.2] D Y013_24265 Appr-1-p processing protein K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106] D Y013_21090 carboxylesterase K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-] D Y013_24300 carboxylesterase K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-] D Y013_07370 alpha/beta hydrolase K19311 lipV; lipase [EC:3.1.1.-] D Y013_17450 cutinase K27360 cut6; phospholipase A/thioesterase [EC:3.1.1.-] D Y013_00470 4-hydroxybenzoyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D Y013_00480 4-hydroxybenzoyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D Y013_02185 thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D Y013_24390 4-hydroxybenzoyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D Y013_20190 haloacid dehalogenase K15781 serB-plsC; putative phosphoserine phosphatase / 1-acylglycerol-3-phosphate O-acyltransferase [EC:3.1.3.3 2.3.1.51] D Y013_07835 protein tyrosine phosphatase K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48] D Y013_06595 histidine phosphatase K22306 gpgP; glucosyl-3-phosphoglycerate phosphatase [EC:3.1.3.85] D Y013_23055 phosphoesterase K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97] D Y013_09005 hypothetical protein K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-] D Y013_21440 sulfatase K01133 betC; choline-sulfatase [EC:3.1.6.6] D Y013_21425 DNAase K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D Y013_00045 endonuclease K07503 nucS; endonuclease [EC:3.1.-.-] D Y013_12820 glucuronyl hydrolase K18581 ugl; unsaturated chondroitin disaccharide hydrolase [EC:3.2.1.180] D Y013_16235 glycogen debranching enzyme K23086 ggH; glucosylglycerate hydrolase [EC:3.2.1.208] D Y013_20110 prenyltransferase-like family protein K27194 mmpH; MMP endo-(1,4)-3-O-methyl-alpha-D-mannosidase [EC:3.2.1.221] D Y013_08745 creatininase K24697 mftE; mycofactocin precursor peptide peptidase [EC:3.4.14.14] D Y013_08905 peptidase S12 K01286 E3.4.16.4; D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4] D Y013_14195 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D Y013_10075 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D Y013_22795 1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside deacetylase K15525 mshB; N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase [EC:3.5.1.103] D Y013_14565 polysaccharide deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104] D Y013_10445 polysaccharide deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104] D Y013_21830 GlcNAc-PI de-N-acetylase K18455 mca; mycothiol S-conjugate amidase [EC:3.5.1.115] D Y013_22660 hydroxydechloroatrazine ethylaminohydrolase K18456 E3.5.4.32; 8-oxoguanine deaminase [EC:3.5.4.32] D Y013_02735 ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D Y013_15775 amidohydrolase K22213 PATG; 6-methylsalicylate decarboxylase [EC:4.1.1.52] D Y013_18965 lipid-transfer protein K25623 ltp2; 17-hydroxy-3-oxo-4-pregnene-20-carboxyl-CoA lyase [EC:4.1.3.-] D Y013_19335 lipid-transfer protein K25623 ltp2; 17-hydroxy-3-oxo-4-pregnene-20-carboxyl-CoA lyase [EC:4.1.3.-] D Y013_07150 hypothetical protein K10254 ohyA; oleate hydratase [EC:4.2.1.53] D Y013_08320 carbohydrate kinase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D Y013_19350 hypothetical protein K25621 chsH2; 3-oxo-4,17-pregnadiene-20-carboxyl-CoA hydratase alpha subunit [EC:4.2.1.-] D Y013_18955 DNA-binding protein K25621 chsH2; 3-oxo-4,17-pregnadiene-20-carboxyl-CoA hydratase alpha subunit [EC:4.2.1.-] D Y013_19340 beta-hydroxyacyl-ACP dehydratase K25622 chsH1; 3-oxo-4,17-pregnadiene-20-carboxyl-CoA hydratase beta subunit [EC:4.2.1.-] D Y013_18960 beta-hydroxyacyl-ACP dehydratase K25622 chsH1; 3-oxo-4,17-pregnadiene-20-carboxyl-CoA hydratase beta subunit [EC:4.2.1.-] D Y013_20645 peptidyl-prolyl cis-trans isomerase K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8] D Y013_04240 chorismate mutase K23874 cmlD; 4-amino-4-deoxychorismate mutase [EC:5.4.99.67] D Y013_19435 acyl-CoA synthetase K18688 fadD19; 3-oxocholest-4-en-26-oate---CoA ligase [EC:6.2.1.42] D Y013_22425 crotonobetaine/carnitine-CoA ligase K02182 caiC; carnitine-CoA ligase [EC:6.2.1.48] D Y013_12330 fatty acid--CoA ligase K25775 casG; steroid-24-oyl-CoA synthetase [EC:6.2.1.-] D Y013_19235 acyl-CoA synthetase K25776 casI; steroid-22-oyl-CoA synthetase [EC:6.2.1.-] D Y013_02985 cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase K15526 mshC; L-cysteine:1D-myo-inositol 2-amino-2-deoxy-alpha-D-glucopyranoside ligase [EC:6.3.1.13] D Y013_03565 acetyl-CoA carboxylase K01970 accD2; acyl-CoA carboxylase subunit beta [EC:6.4.1.-] D Y013_20705 acetyl-CoA carboxylase K04104 accD3; acyl-CoA carboxylase subunit beta [EC:6.4.1.-] D Y013_17465 acetyl-CoA carboxylase subunit beta K27093 accD4; long chain acyl-CoA carboxylase carboxyl transferase subunit beta 4 [EC:6.4.1.- 2.1.3.-] D Y013_03570 acetyl-CoA carboxylase subunit alpha K27596 accA2; acyl-CoA carboxylase subunit alpha [EC:6.4.1.-] D Y013_10995 ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9] D Y013_15115 ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9] D Y013_25480 ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9] D Y013_17955 ATPase K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10] D Y013_20785 cation-transporting ATPase K12952 ctpE; cation-transporting P-type ATPase E [EC:7.2.2.-] C 99981 Carbohydrate metabolism D Y013_01710 acetoin utilization protein AcuC K04768 acuC; acetoin utilization protein AcuC D Y013_03480 Fe-S osidoreductase K18928 lldE; L-lactate dehydrogenase complex protein LldE D Y013_03485 (4Fe-4S) cluster-containing protein K18929 lldF; L-lactate dehydrogenase complex protein LldF D Y013_03490 l-lactate utilization lutc protein K00782 lldG; L-lactate dehydrogenase complex protein LldG C 99982 Energy metabolism D Y013_00650 formate dehydrogenase accessory protein FdhD K02379 fdhD; FdhD protein D Y013_12010 ferredoxin K05337 fer; ferredoxin D Y013_19475 ferredoxin K05337 fer; ferredoxin D Y013_02690 nitrogen fixation protein NifU K04488 iscU; nitrogen fixation protein NifU and related proteins D Y013_06875 electron transfer flavoprotein subunit beta K03521 fixA; electron transfer flavoprotein beta subunit D Y013_12125 hypothetical protein K09165 K09165; dodecin C 99983 Lipid metabolism D Y013_21105 acyl-CoA dehydrogenase K09456 aidB; putative acyl-CoA dehydrogenase D Y013_06585 hypothetical protein K25232 fakB; fatty acid kinase fatty acid binding subunit D Y013_00310 short-chain dehydrogenase K27306 cmrA; mycolic acid reductase C 99984 Nucleotide metabolism D Y013_06990 ribonucleotide reductase K03647 nrdI; protein involved in ribonucleotide reduction C 99985 Amino acid metabolism D Y013_02990 glyoxalase K08234 yaeR; glyoxylase I family protein D Y013_05730 hypothetical protein K06997 yggS; PLP dependent protein D Y013_15925 GNAT family acetyltransferase K22479 argA; N-acetyltransferase C 99986 Glycan metabolism D Y013_20485 resuscitation-promoting factor K21687 rpfA; resuscitation-promoting factor RpfA D Y013_21445 resuscitation-promoting factor rpfB K21688 rpfB; resuscitation-promoting factor RpfB D Y013_07290 hypothetical protein K21691 rpfE; resuscitation-promoting factor RpfE D Y013_09470 transglycosylase K21691 rpfE; resuscitation-promoting factor RpfE D Y013_08740 glycosyl transferase family 2 K24698 mftF; mycofactocin glycosyltransferase C 99987 Cofactor metabolism D Y013_08785 hypothetical protein K24694 mftA; mycofactocin precursor peptide MftA D Y013_08780 mycofactocin system protein MftB K24695 mftB; mycofactocin biosynthesis protein MftB C 99988 Secondary metabolism C 99999 Others D Y013_06750 membrane protein K15977 K15977; putative oxidoreductase D Y013_21435 membrane protein K15977 K15977; putative oxidoreductase D Y013_16860 DoxX family protein K15977 K15977; putative oxidoreductase B B 09192 Unclassified: genetic information processing C 99973 Transcription D Y013_20890 cold-shock protein K03704 cspA; cold shock protein D Y013_20500 cold-shock protein K03704 cspA; cold shock protein D Y013_25040 hypothetical protein K03704 cspA; cold shock protein D Y013_25245 hypothetical protein K03704 cspA; cold shock protein D Y013_22500 hypothetical protein K03704 cspA; cold shock protein D Y013_21455 cold-shock protein K03704 cspA; cold shock protein D Y013_26030 hypothetical protein K03704 cspA; cold shock protein D Y013_18555 cold-shock protein K03704 cspA; cold shock protein D Y013_15000 cold-shock protein K03704 cspA; cold shock protein D Y013_10880 cold-shock protein K03704 cspA; cold shock protein D Y013_01035 RNA-binding protein K06959 tex; protein Tex C 99974 Translation D Y013_06255 beta-lactamase K07576 K07576; metallo-beta-lactamase family protein C 99975 Protein processing D Y013_07050 hypothetical protein K03668 hslJ; heat shock protein HslJ D Y013_07055 hypothetical protein K03668 hslJ; heat shock protein HslJ D Y013_00125 ATP-dependent Clp protease ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS D Y013_00585 trigger factor K03545 tig; trigger factor D Y013_13895 urease accessory protein UreE K03187 ureE; urease accessory protein D Y013_03360 urease accessory protein UreF K03188 ureF; urease accessory protein D Y013_13900 urease accessory protein UreF K03188 ureF; urease accessory protein D Y013_03355 urease accessory protein UreG K03189 ureG; urease accessory protein D Y013_13885 urease accessory protein UreG K03189 ureG; urease accessory protein D Y013_03350 urease accessory protein UreD K03190 ureD; urease accessory protein D Y013_13890 urease accessory protein ureD K03190 ureD; urease accessory protein D Y013_07230 single-stranded DNA-binding protein K03664 smpB; SsrA-binding protein D Y013_06995 glutaredoxin K06191 nrdH; glutaredoxin-like protein NrdH D Y013_01070 hypothetical protein K07391 comM; magnesium chelatase family protein D Y013_09300 cytochrome C biogenesis protein ResB K07399 resB; cytochrome c biogenesis protein D Y013_15415 hypothetical protein K07401 K07401; selenoprotein W-related protein D Y013_11295 hypothetical protein K07401 K07401; selenoprotein W-related protein D Y013_00440 carbon monoxide dehydrogenase F protein K07402 xdhC; xanthine dehydrogenase accessory factor D Y013_12455 xanthine dehydrogenase accessory factor K07402 xdhC; xanthine dehydrogenase accessory factor D Y013_15735 xanthine dehydrogenase accessory factor K07402 xdhC; xanthine dehydrogenase accessory factor C 99976 Replication and repair D Y013_07375 DNA-methyltransferase K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein D Y013_21940 DNA recombinase K09760 rmuC; DNA recombination protein RmuC D Y013_25950 chromosome segregation protein SMC K07459 ybjD; putative ATP-dependent endonuclease of the OLD family D Y013_01065 hypothetical protein K07460 yraN; putative endonuclease D Y013_04060 RecB family exonuclease K07465 K07465; putative RecB family exonuclease D Y013_01075 hypothetical protein K04096 smf; DNA processing protein D Y013_26460 hypothetical protein K04096 smf; DNA processing protein D Y013_02275 ATPase AAA K07478 ycaJ; putative ATPase D Y013_26350 integrase K07482 K07482; transposase, IS30 family D Y013_08625 integrase K07482 K07482; transposase, IS30 family D Y013_04870 transposase K07483 K07483; transposase D Y013_12555 transposase K07483 K07483; transposase D Y013_25385 transposase IS3 K07483 K07483; transposase D Y013_04825 transposase IS3 K07483 K07483; transposase D Y013_25155 transposase Mu K07493 K07493; putative transposase D Y013_25470 transposase K07493 K07493; putative transposase D Y013_25610 transposase K07493 K07493; putative transposase D Y013_25685 transposase K07493 K07493; putative transposase D Y013_25720 transposase K07493 K07493; putative transposase D Y013_24665 transposase K07493 K07493; putative transposase D Y013_25380 integrase K07497 K07497; putative transposase D Y013_23660 transposase IS3 K07497 K07497; putative transposase D Y013_04830 integrase K07497 K07497; putative transposase C 99979 Viral proteins C 99998 Others D Y013_01470 hypothetical protein K03969 pspA; phage shock protein A D Y013_18205 hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D Y013_13215 amino acid transporter K03293 TC.AAT; amino acid transporter, AAT family D Y013_13805 transporter K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D Y013_15255 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D Y013_11135 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D Y013_20420 citrate:proton symporter K03300 TC.CITMHS; citrate-Mg2+:H+ or citrate-Ca2+:H+ symporter, CitMHS family D Y013_11685 major facilitator transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family D Y013_09225 inorganic phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family D Y013_23475 sodium:solute symporter K03307 TC.SSS; solute:Na+ symporter, SSS family D Y013_20180 transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family D Y013_16075 amino acid carrier protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D Y013_21390 sodium:alanine symporter K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D Y013_20250 nitrate reductase K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family C 99978 Cell growth D Y013_16475 single-stranded DNA-binding protein K06346 jag; spoIIIJ-associated protein D Y013_04905 recombinase K06400 spoIVCA; site-specific DNA recombinase C 99993 Cell motility C 99995 Signaling proteins D Y013_17655 stress protein K05792 terA; tellurite resistance protein TerA D Y013_14465 chemical-damaging agent resistance protein C K05795 terD; tellurium resistance protein TerD D Y013_10345 chemical-damaging agent resistance protein C K05795 terD; tellurium resistance protein TerD D Y013_19160 carbon starvation protein CstA K06200 cstA; carbon starvation protein D Y013_22785 GTP-binding protein TypA K06207 typA; GTP-binding protein D Y013_06430 phosphate starvation protein PhoH K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins D Y013_21880 ATP-binding protein K07175 phoH2; PhoH-like ATPase D Y013_09140 hypothetical protein K09767 yajQ; cyclic-di-GMP-binding protein C 99992 Structural proteins D Y013_16100 gas vesicle protein K23262 gvpA; gas vesicle structural protein C 99994 Others D Y013_20035 PhoU family transcriptional regulator K02039 phoU; phosphate transport system protein D Y013_15390 PhoU family transcriptional regulator K02039 phoU; phosphate transport system protein D Y013_11270 PhoU family transcriptional regulator K02039 phoU; phosphate transport system protein D Y013_15590 iron-sulfur binding protein K02192 bfd; bacterioferritin-associated ferredoxin D Y013_17740 FAD-dependent oxidoreductase K07222 K07222; putative flavoprotein involved in K+ transport D Y013_26130 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K07222 K07222; putative flavoprotein involved in K+ transport B B 09194 Poorly characterized C 99996 General function prediction only D Y013_03285 endolysin K03791 K03791; putative chitinase D Y013_20240 acetyltransferase K02348 elaA; ElaA protein D Y013_16285 hypothetical protein K04477 ycdX; putative hydrolase D Y013_18550 DEAD/DEAH box helicase K06877 K06877; DEAD/DEAH box helicase domain-containing protein D Y013_00500 globin K06886 glbN; hemoglobin D Y013_07775 cyanoglobin K06886 glbN; hemoglobin D Y013_16900 membrane protein K06994 K06994; putative drug exporter of the RND superfamily D Y013_17915 membrane protein K06994 K06994; putative drug exporter of the RND superfamily D Y013_02670 Fe-S cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB D Y013_02675 hypothetical protein K09015 sufD; Fe-S cluster assembly protein SufD D Y013_19735 phosphotriesterase K07048 PTER; phosphotriesterase-related protein D Y013_01745 ribonuclease BN K07058 K07058; membrane protein D Y013_20680 ribonuclease BN K07058 K07058; membrane protein D Y013_08035 membrane protein K07058 K07058; membrane protein D Y013_23195 phosphoribosyltransferase K07100 K07100; putative phosphoribosyl transferase D Y013_04205 hypothetical protein K07113 fxsA; UPF0716 protein FxsA D Y013_07785 cysteine desufuration protein SufE K02426 sufE; cysteine desulfuration protein SufE D Y013_04035 hypothetical protein K07146 K07146; UPF0176 protein D Y013_04560 PhnB protein K04750 phnB; PhnB protein D Y013_21505 glyoxalase K04750 phnB; PhnB protein D Y013_11605 glyoxalase K04750 phnB; PhnB protein D Y013_21060 membrane protein K02351 K02351; putative membrane protein D Y013_14775 hypothetical protein K03744 lemA; LemA protein D Y013_10655 hypothetical protein K03744 lemA; LemA protein D Y013_14725 membrane protein K03975 dedA; membrane-associated protein D Y013_10605 membrane protein K03975 dedA; membrane-associated protein D Y013_00420 membrane protein K03975 dedA; membrane-associated protein D Y013_06820 membrane protein K01421 yhgE; putative membrane protein D Y013_08985 membrane protein K00389 yidH; putative membrane protein D Y013_09250 membrane protein K08972 K08972; putative membrane protein D Y013_22815 membrane protein K08981 K08981; putative membrane protein D Y013_25495 hypothetical protein K08982 K08982; putative membrane protein D Y013_03225 membrane protein K08987 K08987; putative membrane protein D Y013_05630 hypothetical protein K09858 K09858; SEC-C motif domain protein C 99997 Function unknown D Y013_11640 hypothetical protein K06860 K06860; putative heme uptake system protein D Y013_17355 ankyrin K06867 K06867; uncharacterized protein D Y013_21840 membrane protein K06888 K06888; uncharacterized protein D Y013_18995 hypothetical protein K06889 K06889; uncharacterized protein D Y013_21180 hypothetical protein K06889 K06889; uncharacterized protein D Y013_13235 hydrolase K06889 K06889; uncharacterized protein D Y013_17160 hypothetical protein K06889 K06889; uncharacterized protein D Y013_16535 ATP-binding protein K06945 K06945; uncharacterized protein D Y013_01015 hypothetical protein K06960 K06960; uncharacterized protein D Y013_14210 NH2-acetyltransferase K06975 K06975; uncharacterized protein D Y013_24320 acetyltransferase K06975 K06975; uncharacterized protein D Y013_10090 NH2-acetyltransferase K06975 K06975; uncharacterized protein D Y013_15600 hypothetical protein K06975 K06975; uncharacterized protein D Y013_01175 N-acetyltransferase GCN5 K06976 K06976; uncharacterized protein D Y013_19650 hydrolase K06978 K06978; uncharacterized protein D Y013_15330 peptidase S15 K06978 K06978; uncharacterized protein D Y013_11210 peptidase S15 K06978 K06978; uncharacterized protein D Y013_19845 deacetylase K06986 K06986; uncharacterized protein D Y013_00495 hypothetical protein K06995 K06995; uncharacterized protein D Y013_03020 flavin-nucleotide-binding protein K07005 K07005; uncharacterized protein D Y013_17950 pyridoxamine 5'-phosphate oxidase K07005 K07005; uncharacterized protein D Y013_03660 pyridoxamine 5-phosphate oxidase K07006 K07006; uncharacterized protein D Y013_04175 PPOX class F420-dependent enzyme K07006 K07006; uncharacterized protein D Y013_16880 phosphohydrolase K07006 K07006; uncharacterized protein D Y013_21045 alpha/beta hydrolase K07020 K07020; uncharacterized protein D Y013_20200 hypothetical protein K07028 K07028; uncharacterized protein D Y013_11945 glyoxalase K07032 K07032; uncharacterized protein D Y013_12335 amidohydrolase K07045 K07045; uncharacterized protein D Y013_02250 membrane protein K07054 K07054; uncharacterized protein D Y013_03070 hypothetical protein K07068 K07068; uncharacterized protein D Y013_19415 DNA-binding protein K07068 K07068; uncharacterized protein D Y013_23810 acyl dehydratase K07068 K07068; uncharacterized protein D Y013_16950 nucleoside-diphosphate sugar epimerase K07071 K07071; uncharacterized protein D Y013_19850 FAD-binding dehydrogenase K07077 K07077; uncharacterized protein D Y013_04295 immunogenic protein K07080 K07080; uncharacterized protein D Y013_02875 permease K07090 K07090; uncharacterized protein D Y013_04200 membrane protein K07090 K07090; uncharacterized protein D Y013_20375 permease K07090 K07090; uncharacterized protein D Y013_11690 transporter K07090 K07090; uncharacterized protein D Y013_14370 membrane protein K07090 K07090; uncharacterized protein D Y013_10250 membrane protein K07090 K07090; uncharacterized protein D Y013_23905 permease K07090 K07090; uncharacterized protein D Y013_16230 phosphatase K07093 K07093; uncharacterized protein D Y013_17880 phosphodiesterase K07095 K07095; uncharacterized protein D Y013_04490 metallophosphoesterase K07098 K07098; uncharacterized protein D Y013_18405 metallophosphoesterase K07098 K07098; uncharacterized protein D Y013_14780 short-chain dehydrogenase K07124 K07124; uncharacterized protein D Y013_10660 short-chain dehydrogenase K07124 K07124; uncharacterized protein D Y013_02230 oxidoreductase K07124 K07124; uncharacterized protein D Y013_19250 short-chain dehydrogenase K07124 K07124; uncharacterized protein D Y013_16525 dynein regulation protein LC7 K07131 K07131; uncharacterized protein D Y013_13055 hypothetical protein K07140 K07140; MOSC domain-containing protein D Y013_13355 ATP-dependent protease K07157 K07157; uncharacterized protein D Y013_00450 VWA containing CoxE family protein K07161 K07161; uncharacterized protein D Y013_06610 von Willebrand factor A K07161 K07161; uncharacterized protein D Y013_08835 hypothetical protein K07161 K07161; uncharacterized protein D Y013_15730 von Willebrand factor A K07161 K07161; uncharacterized protein D Y013_06165 hypothetical protein K07164 K07164; uncharacterized protein D Y013_04505 hypothetical protein K08999 K08999; uncharacterized protein D Y013_21705 septum formation initiator family protein K09009 K09009; uncharacterized protein D Y013_18410 GatB/Yqey domain protein K09117 K09117; uncharacterized protein D Y013_07295 membrane protein K09118 K09118; uncharacterized protein D Y013_04955 hypothetical protein K09146 K09146; uncharacterized protein D Y013_14305 hypothetical protein K09164 K09164; uncharacterized protein D Y013_10185 hypothetical protein K09164 K09164; uncharacterized protein D Y013_22820 membrane protein K09167 K09167; uncharacterized protein D Y013_12425 carbon monoxide dehydrogenase subunit G K09386 K09386; uncharacterized protein D Y013_16925 hypothetical protein K09701 K09701; uncharacterized protein D Y013_13350 hypothetical protein K09763 K09763; uncharacterized protein D Y013_01285 hypothetical protein K09764 K09764; uncharacterized protein D Y013_01450 hypothetical protein K09780 K09780; uncharacterized protein D Y013_12875 hypothetical protein K09780 K09780; uncharacterized protein D Y013_12970 hypothetical protein K09780 K09780; uncharacterized protein D Y013_15875 ABC transporter K09781 K09781; uncharacterized protein D Y013_04700 hypothetical protein K09791 K09791; uncharacterized protein D Y013_14415 membrane protein K09793 K09793; uncharacterized protein D Y013_10295 membrane protein K09793 K09793; uncharacterized protein D Y013_03695 hypothetical protein K09807 K09807; uncharacterized protein D Y013_01245 hypothetical protein K09861 K09861; uncharacterized protein D Y013_17835 hypothetical protein K09957 K09957; uncharacterized protein D Y013_08720 hypothetical protein K09959 K09959; uncharacterized protein D Y013_23450 urea carboxylase K09967 K09967; uncharacterized protein D Y013_23455 urea carboxylase K09967 K09967; uncharacterized protein D Y013_17825 hypothetical protein K09968 K09968; uncharacterized protein D Y013_00670 HutD-family protein K09975 K09975; uncharacterized protein D Y013_19740 prolyl 4-hydroxylase K09990 K09990; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 18, 2024