+E Messenger RNA Biogenesis KO #

  Messenger RNA Biogenesis - Rufibacter sp. DG15C

% ! AEukaryotic type B mRNA processing factors C 5' end processing D Capping factors D Cap binding complex C 3' end processing D Pre-mRNA cleavage factor Im (CFIm) D Pre-mRNA cleavage factor IIm (CFIIm) D Cleavage and polyadenylation specificity factor (CPSF) complex D Cleavage stimulation factor (CSTF) complex D U7-dependent histone pre-mRNA processing factors D DRB sensitivity inducing factor (DSIF) complex D N6-methyltransferase complex D Poly(A) addition factors D Negative regulators of mRNA 3' end processing C Other processing factors B mRNA surveillance and transport factors C Transport factors D EJC complex D TREX complex D TREX-2 complex D Nuclear pore complex D Ran-mediated transport factors D eIF4F and regulatory proteins D APOBEC1-ACF complex D Other transport factors C Surveillance factors D Surveillance complex D Protein phosphatase 2A D Other surveillance factors C Factors involved in mRNA localization D Cargo complex D Factors that have mRNA localization signals D Trans-acting binding proteins D Other mRNA localization factors C mRNA cycle factors D Common to processing body (P body) and stress granule D P-body specific factors D Stress granule specific factors B mRNA degradation factors C 5'-3' decay D Decapping complex D Lsm complex D 5' exonucleases D Other 5'-3' decay factors C 3'-5' decay D Core exosome factors D Exosome cofactors D TRAMP complex D Ski complex D Ccr4-NOT complex D Pan complex D Other 3'-5' decay factors C Other degradation factors D RNases # AProkaryotic type B Bacterial mRNA degradation factors C RNA degradosome components D Ribonucreases E TH61_04315 ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-] E TH61_11275 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] E TH61_03360 ribonuclease K18682 rny; ribonucrease Y [EC:3.1.-.-] E TH61_06460 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D Helicases E TH61_07390 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] E TH61_15725 RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] E TH61_00395 RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] E TH61_01020 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] E TH61_14255 RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] E TH61_14175 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] E TH61_11230 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] E TH61_14395 hypothetical protein K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] E TH61_17525 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D Other RNA degradosome components E TH61_09730 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] E TH61_14670 polynucleotide phosphorylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] E TH61_02465 transcription termination factor Rho K03628 rho; transcription termination factor Rho E TH61_17065 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] C Other RNA degradation factors D Chaperones E TH61_11860 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK E TH61_15375 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Others E TH61_08735 hypothetical protein K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] E TH61_16475 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] E TH61_00740 tRNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] E TH61_12630 ATP-dependent helicase K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6] E TH61_12740 DEAD/DEAH box helicase K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6] D Bacterial Small RNA Regulators B Archeal mRNA degradation factors C Exosome components D Core exosome D Cofactors D Others ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 25, 2024