+D GENES KO #

  KEGG Orthology (KO) - Ruminococcus bovis

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:ruj00010] D E5Z56_04870 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D E5Z56_08195 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D E5Z56_11275 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D E5Z56_04515 ATP-dependent 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D E5Z56_08070 fructose-1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11] D E5Z56_04930 fba; class II fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D E5Z56_03585 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D E5Z56_01450 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D E5Z56_03580 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D E5Z56_03590 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D E5Z56_00205 cofactor-independent phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D E5Z56_00275 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D E5Z56_06340 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D E5Z56_04115 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D E5Z56_00615 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D E5Z56_04535 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D E5Z56_05985 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D E5Z56_01010 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D E5Z56_02435 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D E5Z56_01895 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D E5Z56_03240 galactose mutarotase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D E5Z56_00050 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D E5Z56_09960 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] C 00020 Citrate cycle (TCA cycle) [PATH:ruj00020] D E5Z56_10655 citrate/2-methylcitrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D E5Z56_05040 citrate/2-methylcitrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5] D E5Z56_08990 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D E5Z56_03870 fumarate hydratase K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2] D E5Z56_03860 Fe-S-containing hydro-lyase K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2] D E5Z56_09960 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D E5Z56_04535 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] C 00030 Pentose phosphate pathway [PATH:ruj00030] D E5Z56_08195 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D E5Z56_05820 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D E5Z56_05870 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D E5Z56_05875 transketolase family protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D E5Z56_09590 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D E5Z56_00050 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D E5Z56_00605 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D E5Z56_04930 fba; class II fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D E5Z56_08070 fructose-1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11] D E5Z56_11275 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D E5Z56_04515 ATP-dependent 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] C 00040 Pentose and glucuronate interconversions [PATH:ruj00040] D E5Z56_00220 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D E5Z56_05820 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D E5Z56_05115 NAD(P)-dependent alcohol dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14] D E5Z56_01295 ribitol-5-phosphate dehydrogenase K05352 tarJ; ribitol-5-phosphate 2-dehydrogenase (NADP+) [EC:1.1.1.405] C 00051 Fructose and mannose metabolism [PATH:ruj00051] D E5Z56_11275 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D E5Z56_04515 ATP-dependent 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D E5Z56_08070 fructose-1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11] D E5Z56_00380 pfkB; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] D E5Z56_05115 NAD(P)-dependent alcohol dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14] D E5Z56_04930 fba; class II fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D E5Z56_03585 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D E5Z56_09590 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D E5Z56_05105 ribulose phosphate epimerase K17195 alsE; D-allulose-6-phosphate 3-epimerase [EC:5.1.3.-] D E5Z56_00385 PTS fructose transporter subunit IIC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] C 00052 Galactose metabolism [PATH:ruj00052] D E5Z56_03240 galactose mutarotase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D E5Z56_03255 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D E5Z56_03245 galT; UDP-glucose--hexose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] D E5Z56_02985 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D E5Z56_03250 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D E5Z56_00220 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D E5Z56_00050 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D E5Z56_04870 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D E5Z56_11275 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D E5Z56_04515 ATP-dependent 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D E5Z56_00580 alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] C 00053 Ascorbate and aldarate metabolism C 00500 Starch and sucrose metabolism [PATH:ruj00500] D E5Z56_00580 alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D E5Z56_00220 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D E5Z56_07100 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D E5Z56_07105 glgD; glucose-1-phosphate adenylyltransferase subunit GlgD K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D E5Z56_07110 glgA; glycogen synthase GlgA K00703 glgA; starch synthase [EC:2.4.1.21] D E5Z56_00660 glgB; 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D E5Z56_04995 glycogen/starch/alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D E5Z56_00265 pulA; type I pullulanase K01200 pulA; pullulanase [EC:3.2.1.41] D E5Z56_00270 pulA; type I pullulanase K01200 pulA; pullulanase [EC:3.2.1.41] D E5Z56_10450 pulA; type I pullulanase K01200 pulA; pullulanase [EC:3.2.1.41] D E5Z56_06420 pulA; type I pullulanase K01200 pulA; pullulanase [EC:3.2.1.41] D E5Z56_01070 hypothetical protein K01176 AMY; alpha-amylase [EC:3.2.1.1] D E5Z56_01080 starch-binding protein K01176 AMY; alpha-amylase [EC:3.2.1.1] D E5Z56_05765 hypothetical protein K01176 AMY; alpha-amylase [EC:3.2.1.1] D E5Z56_02515 starch-binding protein K01176 AMY; alpha-amylase [EC:3.2.1.1] D E5Z56_05830 glycosylase K05343 treS; maltose alpha-D-glucosyltransferase / alpha-amylase [EC:5.4.99.16 3.2.1.1] D E5Z56_01610 alpha-glycosidase K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135] D E5Z56_04705 glycoside hydrolase family 13 protein K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135] D E5Z56_00530 alpha-amylase K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135] D E5Z56_05000 malQ; 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25] D E5Z56_00050 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D E5Z56_04870 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D E5Z56_08195 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:ruj00520] D E5Z56_06315 beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D E5Z56_03945 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D E5Z56_01215 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D E5Z56_00610 cytidylyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D E5Z56_03415 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D E5Z56_09155 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D E5Z56_04870 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D E5Z56_00050 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D E5Z56_00220 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D E5Z56_03255 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D E5Z56_03245 galT; UDP-glucose--hexose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] D E5Z56_02985 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D E5Z56_03250 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D E5Z56_08195 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D E5Z56_07100 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D E5Z56_07105 glgD; glucose-1-phosphate adenylyltransferase subunit GlgD K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] C 00620 Pyruvate metabolism [PATH:ruj00620] D E5Z56_01895 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D E5Z56_04535 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D E5Z56_02845 pflB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D E5Z56_01010 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D E5Z56_02435 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D E5Z56_08510 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D E5Z56_07125 pduL; phosphate propanoyltransferase K15024 K15024; putative phosphotransacetylase [EC:2.3.1.8] D E5Z56_04115 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D E5Z56_07410 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D E5Z56_07390 acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D E5Z56_07400 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D E5Z56_07405 acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D E5Z56_05985 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D E5Z56_01460 lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D E5Z56_09220 MBL fold metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D E5Z56_11125 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D E5Z56_08495 oxaloacetate decarboxylase subunit alpha K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2] D E5Z56_09080 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D E5Z56_03870 fumarate hydratase K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2] D E5Z56_03860 Fe-S-containing hydro-lyase K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2] D E5Z56_09960 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D E5Z56_00615 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D E5Z56_01810 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:ruj00630] D E5Z56_01895 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D E5Z56_10655 citrate/2-methylcitrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D E5Z56_05040 citrate/2-methylcitrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5] D E5Z56_08120 HAD family hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D E5Z56_03760 HAD family hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D E5Z56_04900 HAD family hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D E5Z56_07325 glutamine synthetase type III K01915 glnA; glutamine synthetase [EC:6.3.1.2] D E5Z56_07235 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D E5Z56_00945 fucO; lactaldehyde reductase K00048 fucO; lactaldehyde reductase [EC:1.1.1.77] C 00640 Propanoate metabolism [PATH:ruj00640] D E5Z56_01895 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D E5Z56_08510 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D E5Z56_07125 pduL; phosphate propanoyltransferase K15024 K15024; putative phosphotransacetylase [EC:2.3.1.8] D E5Z56_02845 pflB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D E5Z56_07410 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D E5Z56_07390 acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D E5Z56_07400 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D E5Z56_07405 acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D E5Z56_10335 aspartate aminotransferase family protein K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D E5Z56_05040 citrate/2-methylcitrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5] D E5Z56_05985 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D E5Z56_04650 mgsA; methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3] D E5Z56_05130 aldo/keto reductase K18471 ydjG; methylglyoxal reductase [EC:1.1.1.-] D E5Z56_00945 fucO; lactaldehyde reductase K00048 fucO; lactaldehyde reductase [EC:1.1.1.77] C 00650 Butanoate metabolism [PATH:ruj00650] D E5Z56_01010 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D E5Z56_02435 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D E5Z56_09080 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D E5Z56_08490 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma D E5Z56_09075 sodium pump decarboxylase K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta D E5Z56_10335 aspartate aminotransferase family protein K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D E5Z56_10345 4-hydroxybutyrate dehydrogenase K18120 4hbD; 4-hydroxybutyrate dehydrogenase [EC:1.1.1.61] D E5Z56_02845 pflB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D E5Z56_04535 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D E5Z56_05035 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D E5Z56_00730 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D E5Z56_02520 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D E5Z56_00725 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] C 00660 C5-Branched dibasic acid metabolism [PATH:ruj00660] D E5Z56_05035 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D E5Z56_00730 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D E5Z56_02520 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D E5Z56_00725 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D E5Z56_04420 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D E5Z56_04415 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D E5Z56_11395 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism D E5Z56_03585 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:ruj00190] D E5Z56_00475 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D E5Z56_00465 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D E5Z56_00470 atpG; ATP synthase F1 subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D E5Z56_00480 atpH; ATP synthase F1 subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D E5Z56_00460 atpC; ATP synthase F1 subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D E5Z56_00510 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D E5Z56_00485 atpF; F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D E5Z56_00490 atpE; ATP synthase F0 subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D E5Z56_01865 inorganic diphosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] D E5Z56_04520 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation by Calvin cycle [PATH:ruj00710] D E5Z56_03580 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D E5Z56_01450 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D E5Z56_04930 fba; class II fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D E5Z56_08070 fructose-1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11] D E5Z56_05870 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D E5Z56_05875 transketolase family protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D E5Z56_09590 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D E5Z56_03585 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D E5Z56_05820 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D E5Z56_09960 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D E5Z56_00615 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] C 00720 Other carbon fixation pathways [PATH:ruj00720] D E5Z56_04535 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D E5Z56_00615 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D E5Z56_03870 fumarate hydratase K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2] D E5Z56_03860 Fe-S-containing hydro-lyase K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2] D E5Z56_08990 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D E5Z56_07410 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D E5Z56_07390 acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D E5Z56_07400 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D E5Z56_07405 acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D E5Z56_09575 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3] D E5Z56_08870 folD; bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D E5Z56_03965 metF; methylenetetrahydrofolate reductase [NAD(P)H] K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D E5Z56_10400 metF; methylenetetrahydrofolate reductase [NAD(P)H] K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D E5Z56_07125 pduL; phosphate propanoyltransferase K15024 K15024; putative phosphotransacetylase [EC:2.3.1.8] D E5Z56_08510 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D E5Z56_01895 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] C 00680 Methane metabolism [PATH:ruj00680] D E5Z56_07235 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D E5Z56_00275 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D E5Z56_06340 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D E5Z56_04930 fba; class II fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D E5Z56_08070 fructose-1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11] D E5Z56_11275 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D E5Z56_04515 ATP-dependent 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D E5Z56_08510 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D E5Z56_01895 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D E5Z56_03590 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D E5Z56_00205 cofactor-independent phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D E5Z56_06305 3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D E5Z56_06300 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00910 Nitrogen metabolism [PATH:ruj00910] D E5Z56_10265 priS; hydroxylamine reductase K05601 hcp; hydroxylamine reductase [EC:1.7.99.1] D E5Z56_01530 NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D E5Z56_07325 glutamine synthetase type III K01915 glnA; glutamine synthetase [EC:6.3.1.2] D E5Z56_10230 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D E5Z56_00405 gltA; NADPH-dependent glutamate synthase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D E5Z56_10235 glutamate synthase subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] C 00920 Sulfur metabolism [PATH:ruj00920] D E5Z56_09425 sulfate ABC transporter substrate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D E5Z56_09430 cysT; sulfate ABC transporter permease subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein D E5Z56_09435 cysW; sulfate ABC transporter permease subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein D E5Z56_09440 ABC transporter ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D E5Z56_09535 GTP-binding protein K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D E5Z56_09530 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D E5Z56_01625 cysC; adenylyl-sulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25] D E5Z56_04500 bifunctional oligoribonuclease/PAP phosphatase NrnA K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] D E5Z56_09520 adenylyl-sulfate reductase subunit alpha K00394 aprA; adenylylsulfate reductase, subunit A [EC:1.8.99.2] D E5Z56_09525 4Fe-4S dicluster domain-containing protein K00395 aprB; adenylylsulfate reductase, subunit B [EC:1.8.99.2] D E5Z56_09485 4Fe-4S dicluster domain-containing protein K00385 asrC; anaerobic sulfite reductase subunit C D E5Z56_03460 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D E5Z56_01640 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D E5Z56_06610 metA; homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:ruj00061] D E5Z56_07410 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D E5Z56_07390 acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D E5Z56_07400 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D E5Z56_07405 acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D E5Z56_06600 acpP; acyl carrier protein K02078 acpP; acyl carrier protein D E5Z56_07375 ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D E5Z56_01030 fabF; beta-ketoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D E5Z56_07385 fabF; beta-ketoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D E5Z56_05920 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D E5Z56_07380 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D E5Z56_07395 beta-hydroxyacyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D E5Z56_07370 fabK; enoyl-[acyl-carrier-protein] reductase FabK K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9] D E5Z56_04925 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D E5Z56_01025 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:ruj00071] D E5Z56_04925 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D E5Z56_01025 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D E5Z56_01010 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D E5Z56_02435 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] C 00073 Cutin, suberine and wax biosynthesis C 00074 Mycolic acid biosynthesis D E5Z56_06600 acpP; acyl carrier protein K02078 acpP; acyl carrier protein D E5Z56_07375 ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:ruj00561] D E5Z56_11045 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D E5Z56_08230 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D E5Z56_11360 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D E5Z56_00365 YegS/Rv2252/BmrU family lipid kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107] D E5Z56_01605 triacylglycerol lipase K01046 lip; triacylglycerol lipase [EC:3.1.1.3] D E5Z56_05775 galactosyldiacylglycerol synthase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315] C 00564 Glycerophospholipid metabolism [PATH:ruj00564] D E5Z56_09300 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D E5Z56_08230 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D E5Z56_11360 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D E5Z56_00365 YegS/Rv2252/BmrU family lipid kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107] D E5Z56_02525 glycerol-3-phosphate cytidyltransferase K00968 PCYT1; choline-phosphate cytidylyltransferase [EC:2.7.7.15] D E5Z56_11195 hypothetical protein K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D E5Z56_04550 phosphatidylserine synthase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D E5Z56_04545 phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D E5Z56_03470 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D E5Z56_04430 cls; cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] D E5Z56_02035 cls; cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] D E5Z56_01175 CDP-alcohol phosphatidyltransferase family protein K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41] C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism C 01040 Biosynthesis of unsaturated fatty acids B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:ruj00230] D E5Z56_00050 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D E5Z56_00605 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D E5Z56_09625 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D E5Z56_10060 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D E5Z56_10085 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D E5Z56_10070 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D E5Z56_04620 phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] D E5Z56_10065 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D E5Z56_10055 purE; 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D E5Z56_09620 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D E5Z56_09630 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D E5Z56_10080 phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D E5Z56_10075 inosine monophosphate cyclohydrolase K11176 purO; IMP cyclohydrolase [EC:3.5.4.10] D E5Z56_08240 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D E5Z56_09040 pgeF; peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D E5Z56_08375 hpt; hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D E5Z56_04825 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D E5Z56_11020 rdgB; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D E5Z56_04885 xanthine phosphoribosyltransferase K03816 xpt; xanthine phosphoribosyltransferase [EC:2.4.2.22] D E5Z56_09640 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D E5Z56_00025 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D E5Z56_11505 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D E5Z56_00970 anaerobic ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D E5Z56_01260 5'-deoxynucleotidase K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89] D E5Z56_09210 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D E5Z56_10000 cyaB; class IV adenylate cyclase K05873 cyaB; adenylate cyclase, class 2 [EC:4.6.1.1] D E5Z56_09635 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D E5Z56_07545 ade; adenine deaminase K01486 ade; adenine deaminase [EC:3.5.4.2] D E5Z56_00340 TIGR00282 family metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16] D E5Z56_07035 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D E5Z56_09240 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D E5Z56_01625 cysC; adenylyl-sulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25] D E5Z56_09535 GTP-binding protein K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D E5Z56_09530 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] C 00240 Pyrimidine metabolism [PATH:ruj00240] D E5Z56_07310 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D E5Z56_07315 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D E5Z56_09610 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D E5Z56_06285 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D E5Z56_03100 dihydroorotate dehydrogenase K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14] D E5Z56_03105 dihydroorotate dehydrogenase electron transfer subunit K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit D E5Z56_06290 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D E5Z56_06295 pyrF; orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D E5Z56_11210 UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D E5Z56_09240 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D E5Z56_07305 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2] D E5Z56_11365 (d)CMP kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D E5Z56_09595 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D E5Z56_00340 TIGR00282 family metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16] D E5Z56_00970 anaerobic ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D E5Z56_01260 5'-deoxynucleotidase K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89] D E5Z56_04865 dCMP deaminase family protein K01493 comEB; dCMP deaminase [EC:3.5.4.12] D E5Z56_08395 thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D E5Z56_04685 dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D E5Z56_08390 FAD-dependent thymidylate synthase K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:ruj00250] D E5Z56_06730 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D E5Z56_05880 hypothetical protein K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D E5Z56_00360 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D E5Z56_04615 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D E5Z56_03525 carbon-nitrogen family hydrolase K13566 NIT2; omega-amidase [EC:3.5.1.3] D E5Z56_03840 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D E5Z56_03835 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D E5Z56_09635 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D E5Z56_09630 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D E5Z56_09610 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D E5Z56_10335 aspartate aminotransferase family protein K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D E5Z56_10230 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D E5Z56_00405 gltA; NADPH-dependent glutamate synthase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D E5Z56_10235 glutamate synthase subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D E5Z56_01530 NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D E5Z56_07325 glutamine synthetase type III K01915 glnA; glutamine synthetase [EC:6.3.1.2] D E5Z56_07310 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D E5Z56_07315 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D E5Z56_03945 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D E5Z56_09625 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D E5Z56_10060 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:ruj00260] D E5Z56_07350 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D E5Z56_10195 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D E5Z56_07355 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D E5Z56_10710 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D E5Z56_07235 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D E5Z56_03590 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D E5Z56_00205 cofactor-independent phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D E5Z56_06305 3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D E5Z56_06300 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D E5Z56_04550 phosphatidylserine synthase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D E5Z56_00560 threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D E5Z56_04165 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D E5Z56_04160 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] C 00270 Cysteine and methionine metabolism [PATH:ruj00270] D E5Z56_03460 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D E5Z56_01640 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D E5Z56_03955 homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D E5Z56_10395 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D E5Z56_02800 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D E5Z56_05020 5'-methylthioadenosine/adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9] D E5Z56_09040 pgeF; peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D E5Z56_05325 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D E5Z56_03535 S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21] D E5Z56_07350 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D E5Z56_10195 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D E5Z56_07355 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D E5Z56_06610 metA; homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31] D E5Z56_09480 O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] D E5Z56_01645 O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] D E5Z56_10155 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D E5Z56_05985 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D E5Z56_06305 3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D E5Z56_06300 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00280 Valine, leucine and isoleucine degradation [PATH:ruj00280] D E5Z56_10155 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D E5Z56_10335 aspartate aminotransferase family protein K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:ruj00290] D E5Z56_00560 threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D E5Z56_04420 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D E5Z56_04415 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D E5Z56_11395 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D E5Z56_05035 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D E5Z56_00730 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D E5Z56_02520 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D E5Z56_00725 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D E5Z56_00720 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D E5Z56_03605 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D E5Z56_10155 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D E5Z56_01810 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:ruj00300] D E5Z56_07355 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D E5Z56_07350 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D E5Z56_10195 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D E5Z56_10200 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D E5Z56_10205 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D E5Z56_03805 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D E5Z56_01270 M20 family metallopeptidase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D E5Z56_07300 LL-diaminopimelate aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83] D E5Z56_10675 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D E5Z56_04060 PLP-dependent aminotransferase family protein K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-] D E5Z56_05745 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D E5Z56_05090 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation D E5Z56_10335 aspartate aminotransferase family protein K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] C 00220 Arginine biosynthesis [PATH:ruj00220] D E5Z56_03800 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D E5Z56_03840 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D E5Z56_03835 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D E5Z56_07325 glutamine synthetase type III K01915 glnA; glutamine synthetase [EC:6.3.1.2] D E5Z56_07310 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D E5Z56_07315 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D E5Z56_01530 NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D E5Z56_03825 argJ; bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] D E5Z56_03810 GNAT family N-acetyltransferase K22477 argO; N-acetylglutamate synthase [EC:2.3.1.1] D E5Z56_03815 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D E5Z56_03830 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D E5Z56_03805 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] C 00330 Arginine and proline metabolism [PATH:ruj00330] D E5Z56_09550 hydantoinase B/oxoprolinase family protein K01474 hyuB; N-methylhydantoinase B [EC:3.5.2.14] D E5Z56_03000 aminotransferase class V-fold PLP-dependent enzyme K01585 speA; arginine decarboxylase [EC:4.1.1.19] D E5Z56_00085 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D E5Z56_06685 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D E5Z56_06680 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00340 Histidine metabolism [PATH:ruj00340] D E5Z56_11160 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D E5Z56_11165 hisZ; ATP phosphoribosyltransferase regulatory subunit K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit D E5Z56_11150 hisI; phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19] D E5Z56_11155 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] D E5Z56_11380 hisH; imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D E5Z56_11385 hisF; imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D E5Z56_00435 hisB; imidazoleglycerol-phosphate dehydratase HisB K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] D E5Z56_00445 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D E5Z56_00230 histidinol-phosphatase HisJ family protein K04486 E3.1.3.15B; histidinol-phosphatase (PHP family) [EC:3.1.3.15] D E5Z56_04905 PHP domain-containing protein K04486 E3.1.3.15B; histidinol-phosphatase (PHP family) [EC:3.1.3.15] D E5Z56_00440 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] C 00350 Tyrosine metabolism [PATH:ruj00350] D E5Z56_00445 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D E5Z56_01010 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D E5Z56_02435 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] C 00360 Phenylalanine metabolism [PATH:ruj00360] D E5Z56_00445 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D E5Z56_01690 hypothetical protein K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39] D E5Z56_02990 nucleoid-structuring protein H-NS K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39] C 00380 Tryptophan metabolism C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:ruj00400] D E5Z56_06580 aroF; 3-deoxy-7-phosphoheptulonate synthase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D E5Z56_06570 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D E5Z56_10985 aroQ; type II 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D E5Z56_04110 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D E5Z56_06590 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D E5Z56_06565 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D E5Z56_06560 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D E5Z56_04140 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D E5Z56_04145 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D E5Z56_04150 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D E5Z56_06750 phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24] D E5Z56_04155 trpC; indole-3-glycerol phosphate synthase TrpC K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48] D E5Z56_04165 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D E5Z56_04160 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D E5Z56_06555 chorismate mutase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51] D E5Z56_06575 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D E5Z56_00445 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:ruj00410] D E5Z56_08965 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D E5Z56_10335 aspartate aminotransferase family protein K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D E5Z56_06255 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] C 00430 Taurine and hypotaurine metabolism [PATH:ruj00430] D E5Z56_07125 pduL; phosphate propanoyltransferase K15024 K15024; putative phosphotransacetylase [EC:2.3.1.8] D E5Z56_08510 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] C 00440 Phosphonate and phosphinate metabolism D E5Z56_02525 glycerol-3-phosphate cytidyltransferase K00968 PCYT1; choline-phosphate cytidylyltransferase [EC:2.7.7.15] C 00450 Selenocompound metabolism [PATH:ruj00450] D E5Z56_03955 homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D E5Z56_10395 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D E5Z56_09515 FAD-binding protein K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D E5Z56_09535 GTP-binding protein K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D E5Z56_09530 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D E5Z56_04305 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:ruj00460] D E5Z56_05880 hypothetical protein K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D E5Z56_07235 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:ruj00470] D E5Z56_06030 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D E5Z56_05095 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D E5Z56_07175 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D E5Z56_11110 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D E5Z56_10675 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] C 00480 Glutathione metabolism D E5Z56_08990 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation C 00540 Lipopolysaccharide biosynthesis [PATH:ruj00540] D E5Z56_01675 KpsF/GutQ family sugar-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D E5Z56_01670 HAD-IIIA family hydrolase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D E5Z56_01685 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] C 00542 O-Antigen repeat unit biosynthesis C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:ruj00541] D E5Z56_00220 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D E5Z56_02985 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D E5Z56_03250 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D E5Z56_06040 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D E5Z56_06050 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D E5Z56_06045 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D E5Z56_00610 cytidylyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] C 00550 Peptidoglycan biosynthesis [PATH:ruj00550] D E5Z56_03415 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D E5Z56_09155 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D E5Z56_00705 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D E5Z56_11110 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D E5Z56_05745 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D E5Z56_05095 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D E5Z56_05090 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D E5Z56_11200 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D E5Z56_08280 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D E5Z56_06215 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D E5Z56_06225 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D E5Z56_07360 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D E5Z56_04660 penicillin-binding protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D E5Z56_06210 PASTA domain-containing protein K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein) D E5Z56_03935 penicillin-binding protein K05364 pbpA; penicillin-binding protein A D E5Z56_08190 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D E5Z56_08475 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D E5Z56_00315 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D E5Z56_00300 D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D E5Z56_06375 DUF1727 domain-containing protein K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13] D E5Z56_06370 glutamine amidotransferase K07009 gatD; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13] C 00552 Teichoic acid biosynthesis [PATH:ruj00552] D E5Z56_08280 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D E5Z56_01250 hypothetical protein K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-] D E5Z56_01255 hypothetical protein K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-] D E5Z56_00420 LytR family transcriptional regulator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-] D E5Z56_06350 LytR family transcriptional regulator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-] D E5Z56_05085 LytR family transcriptional regulator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-] D E5Z56_05775 galactosyldiacylglycerol synthase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315] D E5Z56_01285 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K25651 licD3; teichoic acid ribitol-phosphate transferase C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:ruj00543] D E5Z56_03855 MBOAT family protein K19294 algI; alginate O-acetyltransferase complex protein AlgI D E5Z56_02635 MBOAT family protein K19294 algI; alginate O-acetyltransferase complex protein AlgI D E5Z56_03460 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D E5Z56_06085 polysaccharide pyruvyl transferase family protein K13665 gumL; pyruvyltransferase B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:ruj00730] D E5Z56_08060 thiD; bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D E5Z56_06460 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D E5Z56_02710 nifS; cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D E5Z56_06465 thiI; tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D E5Z56_05910 hydG; [FeFe] hydrogenase H-cluster radical SAM maturase HydG K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19] D E5Z56_11420 thiH; 2-iminoacetate synthase ThiH K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19] D E5Z56_09180 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D E5Z56_11425 thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10] D E5Z56_11415 thiamine phosphate synthase K10810 tenI; thiazole tautomerase (transcriptional regulator TenI) [EC:5.3.99.10] D E5Z56_08045 thiM; hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50] D E5Z56_08050 thiamine phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D E5Z56_11455 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D E5Z56_01495 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D E5Z56_11450 thiamine diphosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2] D E5Z56_07035 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:ruj00740] D E5Z56_10100 deaminase K14654 RIB7; 2,5-diamino-6-(ribosylamino)-4(3H)-pyrimidinone 5'-phosphate reductase [EC:1.1.1.302] D E5Z56_01575 HAD family hydrolase K21064 ycsE; 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.104] D E5Z56_04600 ribF; riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D E5Z56_08045 thiM; hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50] C 00750 Vitamin B6 metabolism [PATH:ruj00750] D E5Z56_06700 pyridoxamine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35] D E5Z56_06300 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D E5Z56_10710 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D E5Z56_10380 pdxS; pyridoxal 5'-phosphate synthase lyase subunit PdxS K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6] D E5Z56_10375 pdxT; pyridoxal 5'-phosphate synthase glutaminase subunit PdxT K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6] C 00760 Nicotinate and nicotinamide metabolism [PATH:ruj00760] D E5Z56_06730 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D E5Z56_03795 nadA; quinolinate synthase NadA K03517 nadA; quinolinate synthase [EC:2.5.1.72] D E5Z56_06725 nadC; carboxylating nicotinate-nucleotide diphosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] D E5Z56_10165 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D E5Z56_11010 nadD; nicotinate (nicotinamide) nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D E5Z56_09240 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D E5Z56_09955 NUDIX domain-containing protein K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22] D E5Z56_02185 NUDIX domain-containing protein K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22] D E5Z56_06000 NAD(+) synthase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1] D E5Z56_05980 NAD-dependent protein deacylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313] D E5Z56_09190 NAD(+)/NADH kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] D E5Z56_09540 isochorismatase family protein K13995 nicF; maleamate amidohydrolase [EC:3.5.1.107] C 00770 Pantothenate and CoA biosynthesis [PATH:ruj00770] D E5Z56_05035 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D E5Z56_00730 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D E5Z56_02520 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D E5Z56_00725 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D E5Z56_00720 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D E5Z56_03605 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D E5Z56_06250 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D E5Z56_09995 ketopantoate reductase family protein K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D E5Z56_06255 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D E5Z56_05860 type III pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33] D E5Z56_05865 coaBC; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D E5Z56_09240 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D E5Z56_06185 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D E5Z56_06020 4'-phosphopantetheinyl transferase superfamily protein K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-] D E5Z56_10155 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D E5Z56_08965 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] C 00780 Biotin metabolism [PATH:ruj00780] D E5Z56_01030 fabF; beta-ketoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D E5Z56_07385 fabF; beta-ketoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D E5Z56_05920 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D E5Z56_07380 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D E5Z56_07395 beta-hydroxyacyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D E5Z56_10740 bioB; biotin synthase BioB K01012 bioB; biotin synthase [EC:2.8.1.6] D E5Z56_07095 hydE; [FeFe] hydrogenase H-cluster radical SAM maturase HydE K01012 bioB; biotin synthase [EC:2.8.1.6] D E5Z56_05855 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism C 00790 Folate biosynthesis [PATH:ruj00790] D E5Z56_03445 Nif3-like dinuclear metal center hexameric protein K22391 E3.5.4.16; GTP cyclohydrolase I [EC:3.5.4.16] D E5Z56_01495 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D E5Z56_06630 bifunctional folylpolyglutamate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] C 00670 One carbon pool by folate [PATH:ruj00670] D E5Z56_09575 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3] D E5Z56_08870 folD; bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D E5Z56_07235 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D E5Z56_10070 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D E5Z56_10080 phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D E5Z56_11485 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D E5Z56_03955 homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D E5Z56_08390 FAD-dependent thymidylate synthase K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] D E5Z56_03965 metF; methylenetetrahydrofolate reductase [NAD(P)H] K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D E5Z56_10400 metF; methylenetetrahydrofolate reductase [NAD(P)H] K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D E5Z56_08415 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:ruj00860] D E5Z56_08700 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D E5Z56_09445 hemA; glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70] D E5Z56_09470 hemL; glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D E5Z56_09465 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D E5Z56_09455 hemC; hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D E5Z56_09460 cobA; uroporphyrinogen-III C-methyltransferase K13542 cobA-hemD; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75] D E5Z56_09450 bifunctional precorrin-2 dehydrogenase/sirohydrochlorin ferrochelatase K24866 sirC; precorrin-2 dehydrogenase [EC:1.3.1.76] D E5Z56_06920 cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D E5Z56_11400 histidine phosphatase family protein K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:ruj00900] D E5Z56_09180 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D E5Z56_11190 1-deoxy-D-xylulose-5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D E5Z56_08170 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] D E5Z56_09340 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D E5Z56_08180 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] D E5Z56_11180 ispG; flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D E5Z56_09175 polyprenyl synthetase family protein K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D E5Z56_11200 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation C 00907 Pinene, camphor and geraniol degradation C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D E5Z56_05870 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D E5Z56_05875 transketolase family protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis [PATH:ruj00523] D E5Z56_06040 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D E5Z56_06050 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D E5Z56_06045 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides C 01055 Biosynthesis of vancomycin group antibiotics D E5Z56_06040 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis D E5Z56_01385 choloylglycine hydrolase family protein K24041 yxeI; penicillin V amidase [EC:3.5.1.11] C 00332 Carbapenem biosynthesis [PATH:ruj00332] D E5Z56_06685 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D E5Z56_06680 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00261 Monobactam biosynthesis [PATH:ruj00261] D E5Z56_09535 GTP-binding protein K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D E5Z56_09530 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D E5Z56_07350 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D E5Z56_10195 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D E5Z56_10200 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D E5Z56_10205 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:ruj00521] D E5Z56_04870 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D E5Z56_00050 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D E5Z56_06040 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D E5Z56_06050 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D E5Z56_06045 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 00524 Neomycin, kanamycin and gentamicin biosynthesis D E5Z56_04870 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] C 00525 Acarbose and validamycin biosynthesis D E5Z56_06040 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis [PATH:ruj00401] D E5Z56_06575 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D E5Z56_00445 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis D E5Z56_04140 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D E5Z56_04145 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis D E5Z56_07375 ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D E5Z56_05920 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D E5Z56_07380 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D E5Z56_06600 acpP; acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites D E5Z56_02800 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:ruj00362] D E5Z56_01690 hypothetical protein K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39] D E5Z56_02990 nucleoid-structuring protein H-NS K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39] D E5Z56_10275 carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44] D E5Z56_09080 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D E5Z56_08490 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma D E5Z56_09075 sodium pump decarboxylase K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta C 00627 Aminobenzoate degradation C 00364 Fluorobenzoate degradation C 00625 Chloroalkane and chloroalkene degradation [PATH:ruj00625] D E5Z56_01010 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D E5Z56_02435 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] C 00361 Chlorocyclohexane and chlorobenzene degradation C 00623 Toluene degradation C 00622 Xylene degradation D E5Z56_01690 hypothetical protein K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39] D E5Z56_02990 nucleoid-structuring protein H-NS K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39] C 00633 Nitrotoluene degradation C 00642 Ethylbenzene degradation C 00643 Styrene degradation C 00791 Atrazine degradation C 00930 Caprolactam degradation C 00363 Bisphenol degradation C 00621 Dioxin degradation D E5Z56_01690 hypothetical protein K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39] D E5Z56_02990 nucleoid-structuring protein H-NS K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39] C 00626 Naphthalene degradation [PATH:ruj00626] D E5Z56_01010 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D E5Z56_02435 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:ruj03020] D E5Z56_06490 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D E5Z56_06495 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D E5Z56_07075 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D E5Z56_00020 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D E5Z56_11500 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:ruj03010] D E5Z56_02245 S1 RNA-binding domain-containing protein K02945 RP-S1; small subunit ribosomal protein S1 D E5Z56_11220 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D E5Z56_06960 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D E5Z56_07070 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D E5Z56_07015 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D E5Z56_08905 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D E5Z56_06505 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D E5Z56_07000 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D E5Z56_04880 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D E5Z56_06925 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D E5Z56_07065 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D E5Z56_06500 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D E5Z56_07060 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D E5Z56_06995 type Z 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D E5Z56_04015 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D E5Z56_06145 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D E5Z56_06975 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D E5Z56_08915 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D E5Z56_06950 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D E5Z56_04350 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D E5Z56_10990 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D E5Z56_07150 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D E5Z56_06945 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D E5Z56_06930 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D E5Z56_06935 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D E5Z56_06990 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D E5Z56_07005 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D E5Z56_07160 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D E5Z56_08360 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D E5Z56_07155 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D E5Z56_07145 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D E5Z56_04875 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D E5Z56_06980 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D E5Z56_07025 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D E5Z56_06965 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D E5Z56_07080 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D E5Z56_07010 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D E5Z56_10895 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D E5Z56_11070 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D E5Z56_08875 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D E5Z56_06955 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D E5Z56_06940 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D E5Z56_06985 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D E5Z56_08885 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D E5Z56_08445 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D E5Z56_06970 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D E5Z56_07020 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D E5Z56_00295 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D E5Z56_08220 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D E5Z56_07130 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D E5Z56_04755 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D E5Z56_11075 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D E5Z56_07055 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 C 00970 Aminoacyl-tRNA biosynthesis [PATH:ruj00970] D E5Z56_02135 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D E5Z56_02695 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D E5Z56_04955 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D E5Z56_08520 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D E5Z56_11435 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D E5Z56_01155 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D E5Z56_08320 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D E5Z56_06785 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D E5Z56_02105 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D E5Z56_02665 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D E5Z56_08550 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D E5Z56_02165 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D E5Z56_02205 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D E5Z56_02190 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D E5Z56_02155 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D E5Z56_01140 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D E5Z56_04840 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D E5Z56_02115 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D E5Z56_02675 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D E5Z56_08540 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D E5Z56_01160 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D E5Z56_00190 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D E5Z56_02160 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D E5Z56_02195 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D E5Z56_01150 tRNA-His K14226 tRNA-His; tRNA His D E5Z56_02130 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D E5Z56_02690 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D E5Z56_04960 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D E5Z56_08525 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D E5Z56_07425 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D E5Z56_07665 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D E5Z56_08850 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D E5Z56_09615 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D E5Z56_02280 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D E5Z56_01145 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D E5Z56_02120 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D E5Z56_02680 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D E5Z56_08535 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D E5Z56_04310 tRNA-Met K14230 tRNA-Met; tRNA Met D E5Z56_04835 tRNA-Met K14230 tRNA-Met; tRNA Met D E5Z56_06850 tRNA-Met K14230 tRNA-Met; tRNA Met D E5Z56_02200 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D E5Z56_06450 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D E5Z56_08315 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D E5Z56_08310 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D E5Z56_10880 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D E5Z56_06865 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D E5Z56_06880 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D E5Z56_04435 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D E5Z56_05730 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D E5Z56_06860 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D E5Z56_06875 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D E5Z56_02170 tRNA-Val K14237 tRNA-Val; tRNA Val D E5Z56_02210 tRNA-Val K14237 tRNA-Val; tRNA Val D E5Z56_08700 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D E5Z56_07280 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D E5Z56_07285 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D E5Z56_07275 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D E5Z56_05925 glutamine--tRNA ligase/YqeY domain fusion protein K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D E5Z56_08430 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D E5Z56_04640 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D E5Z56_07270 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D E5Z56_08125 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D E5Z56_00305 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D E5Z56_04815 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D E5Z56_03455 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D E5Z56_04305 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D E5Z56_11485 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D E5Z56_04375 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D E5Z56_10995 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D E5Z56_10910 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D E5Z56_03685 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D E5Z56_07185 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D E5Z56_06605 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D E5Z56_04645 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D E5Z56_01915 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D E5Z56_01910 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D E5Z56_08295 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D E5Z56_04065 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:ruj03060] D E5Z56_07030 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D E5Z56_07135 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D E5Z56_10025 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D E5Z56_09100 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D E5Z56_09105 protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D E5Z56_10180 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D E5Z56_04770 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D E5Z56_03930 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D E5Z56_06140 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D E5Z56_11025 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D E5Z56_09865 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D E5Z56_10885 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D E5Z56_10890 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D E5Z56_10905 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] D E5Z56_05155 hypothetical protein K13280 SEC11; signal peptidase I [EC:3.4.21.89] D E5Z56_08950 hypothetical protein K13280 SEC11; signal peptidase I [EC:3.4.21.89] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:ruj04122] D E5Z56_06460 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D E5Z56_02710 nifS; cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D E5Z56_03790 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D E5Z56_09505 thiF; thiazole biosynthesis adenylyltransferase ThiF K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80] D E5Z56_06465 thiI; tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D E5Z56_09500 thiS; sulfur carrier protein ThiS K03154 thiS; sulfur carrier protein D E5Z56_11430 thiS; sulfur carrier protein ThiS K03154 thiS; sulfur carrier protein D E5Z56_09510 M67 family metallopeptidase K21140 mec; [CysO sulfur-carrier protein]-S-L-cysteine hydrolase [EC:3.13.1.6] C 03050 Proteasome C 03018 RNA degradation [PATH:ruj03018] D E5Z56_00275 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D E5Z56_06340 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D E5Z56_04020 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D E5Z56_01445 rny; ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-] D E5Z56_08350 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-] D E5Z56_11275 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D E5Z56_04330 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D E5Z56_09290 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D E5Z56_04520 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] B B 09124 Replication and repair C 03030 DNA replication [PATH:ruj03030] D E5Z56_11280 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D E5Z56_11175 PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D E5Z56_00740 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D E5Z56_06655 hypothetical protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D E5Z56_08250 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D E5Z56_04745 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D E5Z56_08365 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D E5Z56_00285 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D E5Z56_08910 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D E5Z56_08345 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D E5Z56_10725 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D E5Z56_00965 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D E5Z56_11340 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:ruj03410] D E5Z56_04855 DNA-3-methyladenine glycosylase 2 family protein K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18] D E5Z56_04255 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D E5Z56_07120 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D E5Z56_08090 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D E5Z56_02575 deoxyribonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D E5Z56_00965 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D E5Z56_09205 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D E5Z56_11340 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:ruj03420] D E5Z56_00595 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D E5Z56_08385 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A D E5Z56_10010 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B D E5Z56_06175 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C D E5Z56_00140 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D E5Z56_00965 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D E5Z56_11340 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03430 Mismatch repair [PATH:ruj03430] D E5Z56_10950 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D E5Z56_02535 DNA mismatch repair protein K03555 mutS; DNA mismatch repair protein MutS D E5Z56_06110 endonuclease MutS2 K07456 mutS2; DNA mismatch repair protein MutS2 D E5Z56_10945 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL D E5Z56_00140 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D E5Z56_11285 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D E5Z56_09170 xseB; exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D E5Z56_09205 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D E5Z56_08910 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D E5Z56_11280 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D E5Z56_11175 PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D E5Z56_04745 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D E5Z56_00740 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D E5Z56_08250 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D E5Z56_06655 hypothetical protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D E5Z56_11340 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03440 Homologous recombination [PATH:ruj03440] D E5Z56_09205 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D E5Z56_08910 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D E5Z56_04735 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF D E5Z56_06115 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D E5Z56_00750 recR; recombination protein RecR K06187 recR; recombination protein RecR D E5Z56_03485 recA; recombinase RecA K03553 recA; recombination protein RecA D E5Z56_00965 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D E5Z56_01225 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA D E5Z56_01220 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D E5Z56_01230 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D E5Z56_00325 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D E5Z56_08140 ATP-dependent RecD-like DNA helicase K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D E5Z56_11280 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D E5Z56_11175 PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D E5Z56_04745 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D E5Z56_00740 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D E5Z56_08250 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D E5Z56_06655 hypothetical protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 [PATH:ruj03250] D E5Z56_02255 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus C 03272 Virion - Hepatitis viruses C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:ruj02010] D E5Z56_09425 sulfate ABC transporter substrate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D E5Z56_09430 cysT; sulfate ABC transporter permease subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein D E5Z56_09435 cysW; sulfate ABC transporter permease subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein D E5Z56_09440 ABC transporter ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D E5Z56_10765 spermidine/putrescine ABC transporter substrate-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein D E5Z56_10770 ABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein D E5Z56_10775 ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein D E5Z56_10780 ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D E5Z56_09805 ABC transporter permease subunit K05845 opuC; osmoprotectant transport system substrate-binding protein D E5Z56_09800 ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D E5Z56_03745 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D E5Z56_05750 hypothetical protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein D E5Z56_05755 sugar ABC transporter permease K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D E5Z56_05760 sugar ABC transporter permease K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D E5Z56_02570 extracellular solute-binding protein K02040 pstS; phosphate transport system substrate-binding protein D E5Z56_02565 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein D E5Z56_02560 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein D E5Z56_02555 pstB; phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D E5Z56_04270 transporter substrate-binding domain-containing protein K10036 glnH; glutamine transport system substrate-binding protein D E5Z56_09010 basic amino acid ABC transporter substrate-binding protein K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein D E5Z56_09015 amino acid ABC transporter permease K17077 artQ; arginine/lysine/histidine transport system permease protein D E5Z56_09020 amino acid ABC transporter ATP-binding protein K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1] D E5Z56_09110 zinc ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein D E5Z56_09120 metal ABC transporter permease K09816 znuB; zinc transport system permease protein D E5Z56_09115 ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D E5Z56_03785 biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component D E5Z56_01195 energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein D E5Z56_01960 energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein D E5Z56_01205 energy-coupling factor transporter ATPase K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D E5Z56_01200 energy-coupling factor transporter ATPase K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D E5Z56_02775 ABC transporter permease K11051 cylB; multidrug/hemolysin transport system permease protein D E5Z56_02770 ABC transporter ATP-binding protein K11050 cylA; multidrug/hemolysin transport system ATP-binding protein D E5Z56_02265 hypothetical protein K09692 tagG; teichoic acid transport system permease protein D E5Z56_02270 ABC transporter ATP-binding protein K09693 tagH; teichoic acid transport system ATP-binding protein [EC:7.5.2.4] D E5Z56_03730 ABC transporter permease K09811 ftsX; cell division transport system permease protein D E5Z56_03735 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D E5Z56_10315 ABC transporter ATP-binding protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-] D E5Z56_10320 ABC transporter ATP-binding protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-] D E5Z56_02815 ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D E5Z56_08705 ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D E5Z56_08710 ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D E5Z56_02810 ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump C 02060 Phosphotransferase system (PTS) [PATH:ruj02060] D E5Z56_00395 ptsP; phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D E5Z56_00390 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr D E5Z56_06170 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr D E5Z56_00385 PTS fructose transporter subunit IIC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D E5Z56_00380 pfkB; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] C 03070 Bacterial secretion system [PATH:ruj03070] D E5Z56_09100 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D E5Z56_09105 protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D E5Z56_07135 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D E5Z56_10025 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D E5Z56_07030 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D E5Z56_10180 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D E5Z56_04770 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D E5Z56_03930 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D E5Z56_11025 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D E5Z56_06140 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D E5Z56_05545 type IV secretory system conjugative DNA transfer family protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8] B B 09132 Signal transduction C 02020 Two-component system [PATH:ruj02020] D E5Z56_07415 histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D E5Z56_07420 response regulator transcription factor K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP D E5Z56_01495 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D E5Z56_02570 extracellular solute-binding protein K02040 pstS; phosphate transport system substrate-binding protein D E5Z56_04000 trypsin-like serine protease K04771 degP; serine protease Do [EC:3.4.21.107] D E5Z56_01390 PDZ domain-containing protein K04771 degP; serine protease Do [EC:3.4.21.107] D E5Z56_03875 response regulator transcription factor K07775 resD; two-component system, OmpR family, response regulator ResD D E5Z56_04750 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D E5Z56_00300 D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D E5Z56_11145 spo0A; sporulation transcription factor Spo0A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A D E5Z56_11125 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D E5Z56_10560 hypothetical protein K07813 agrB; accessory gene regulator B D E5Z56_00125 P-II family nitrogen regulator K04751 glnB; nitrogen regulatory protein P-II 1 D E5Z56_07325 glutamine synthetase type III K01915 glnA; glutamine synthetase [EC:6.3.1.2] D E5Z56_08000 low molecular weight phosphotyrosine protein phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48] C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:ruj02024] D E5Z56_03535 S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21] D E5Z56_04140 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D E5Z56_04145 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D E5Z56_04925 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D E5Z56_01025 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D E5Z56_10560 hypothetical protein K07813 agrB; accessory gene regulator B D E5Z56_04770 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D E5Z56_07135 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D E5Z56_10025 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D E5Z56_07030 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D E5Z56_10180 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D E5Z56_03930 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D E5Z56_11025 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D E5Z56_06140 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D E5Z56_11145 spo0A; sporulation transcription factor Spo0A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis C 02040 Flagellar assembly D E5Z56_00280 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D E5Z56_00275 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D E5Z56_06340 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism D E5Z56_03955 homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:ruj01501] D E5Z56_06315 beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D E5Z56_07360 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D E5Z56_04660 penicillin-binding protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:ruj01502] D E5Z56_05095 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D E5Z56_06030 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D E5Z56_05090 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D E5Z56_06215 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D E5Z56_06225 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D E5Z56_00300 D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:ruj01503] D E5Z56_03910 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D E5Z56_10520 cell wall hydrolase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D E5Z56_02500 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D E5Z56_04000 trypsin-like serine protease K04771 degP; serine protease Do [EC:3.4.21.107] D E5Z56_01390 PDZ domain-containing protein K04771 degP; serine protease Do [EC:3.4.21.107] D E5Z56_02255 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:ruj01000] C 01001 Protein kinases [BR:ruj01001] D E5Z56_11410 PASTA domain-containing protein K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D E5Z56_11460 pknB; Stk1 family PASTA domain-containing Ser/Thr kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D E5Z56_06360 CpsD/CapB family tyrosine-protein kinase K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3] D E5Z56_07415 histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D E5Z56_05185 hypothetical protein K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:ruj01009] D E5Z56_11275 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D E5Z56_04125 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG D E5Z56_02510 serine/threonine-protein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] D E5Z56_02740 serine/threonine-protein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] D E5Z56_11465 Stp1/IreP family PP2C-type Ser/Thr phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] C 01002 Peptidases and inhibitors [BR:ruj01002] D E5Z56_10905 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] D E5Z56_07215 GPR endopeptidase K06012 gpr; spore protease [EC:3.4.24.78] D E5Z56_11255 hypothetical protein K06383 spoIIGA; stage II sporulation protein GA (sporulation sigma-E factor processing peptidase) [EC:3.4.23.-] D E5Z56_09640 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D E5Z56_06480 gamma-glutamyl-gamma-aminobutyrate hydrolase family protein K07010 K07010; putative glutamine amidotransferase D E5Z56_09625 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D E5Z56_10060 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D E5Z56_10230 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D E5Z56_03945 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D E5Z56_00360 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D E5Z56_04615 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D E5Z56_08410 DJ-1/PfpI family protein K03152 thiJ; protein deglycase [EC:3.5.1.124] D E5Z56_01385 choloylglycine hydrolase family protein K24041 yxeI; penicillin V amidase [EC:3.5.1.11] D E5Z56_06435 class C sortase K07284 srtA; sortase A [EC:3.4.22.70] D E5Z56_06440 class C sortase K07284 srtA; sortase A [EC:3.4.22.70] D E5Z56_03180 sortase K07284 srtA; sortase A [EC:3.4.22.70] D E5Z56_03190 class C sortase K07284 srtA; sortase A [EC:3.4.22.70] D E5Z56_03195 class C sortase K07284 srtA; sortase A [EC:3.4.22.70] D E5Z56_00425 srtB; class B sortase K08600 srtB; sortase B [EC:3.4.22.71] D E5Z56_05575 class B sortase K08600 srtB; sortase B [EC:3.4.22.71] D E5Z56_09860 class B sortase K08600 srtB; sortase B [EC:3.4.22.71] D E5Z56_09875 srtB; class B sortase K08600 srtB; sortase B [EC:3.4.22.71] D E5Z56_10560 hypothetical protein K07813 agrB; accessory gene regulator B D E5Z56_07870 CPBP family intramembrane metalloprotease K07052 K07052; CAAX protease family protein D E5Z56_09745 CPBP family intramembrane metalloprotease K07052 K07052; CAAX protease family protein D E5Z56_11085 CPBP family intramembrane metalloprotease K07052 K07052; CAAX protease family protein D E5Z56_04610 gamma-D-glutamyl-meso-diaminopimelate peptidase K01308 yqgT; g-D-glutamyl-meso-diaminopimelate peptidase [EC:3.4.19.11] D E5Z56_00300 D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D E5Z56_10715 hypothetical protein K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D E5Z56_01270 M20 family metallopeptidase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D E5Z56_07040 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D E5Z56_01570 aminopeptidase K19689 ampS; aminopeptidase [EC:3.4.11.-] D E5Z56_08380 hflB; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D E5Z56_09405 hypothetical protein K06402 spoIVFB; stage IV sporulation protein FB [EC:3.4.24.-] D E5Z56_11185 rseP; RIP metalloprotease RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D E5Z56_04000 trypsin-like serine protease K04771 degP; serine protease Do [EC:3.4.21.107] D E5Z56_01390 PDZ domain-containing protein K04771 degP; serine protease Do [EC:3.4.21.107] D E5Z56_08190 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D E5Z56_08475 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D E5Z56_00315 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D E5Z56_10695 clpP; ATP-dependent Clp endopeptidase proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D E5Z56_10685 lon; endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D E5Z56_05050 lexA; transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88] D E5Z56_09865 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D E5Z56_10885 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D E5Z56_10890 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D E5Z56_05155 hypothetical protein K13280 SEC11; signal peptidase I [EC:3.4.21.89] D E5Z56_08950 hypothetical protein K13280 SEC11; signal peptidase I [EC:3.4.21.89] D E5Z56_11140 spoIVB; SpoIVB peptidase K06399 spoIVB; stage IV sporulation protein B [EC:3.4.21.116] D E5Z56_08425 U32 family peptidase K08303 prtC; U32 family peptidase [EC:3.4.-.-] D E5Z56_04690 U32 family peptidase K08303 prtC; U32 family peptidase [EC:3.4.-.-] C 01003 Glycosyltransferases [BR:ruj01003] D E5Z56_05775 galactosyldiacylglycerol synthase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315] D E5Z56_07110 glgA; glycogen synthase GlgA K00703 glgA; starch synthase [EC:2.4.1.21] D E5Z56_07360 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] C 01005 Lipopolysaccharide biosynthesis proteins [BR:ruj01005] D E5Z56_01670 HAD-IIIA family hydrolase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D E5Z56_01685 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D E5Z56_01675 KpsF/GutQ family sugar-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D E5Z56_01060 glycosyltransferase family 2 protein K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-] D E5Z56_04575 glycosyltransferase family 2 protein K12999 rgpI; glucosyltransferase [EC:2.4.1.-] D E5Z56_01755 sugar transferase K13012 wbqP; O-antigen biosynthesis protein WbqP C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:ruj01011] D E5Z56_03415 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D E5Z56_09155 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D E5Z56_00705 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D E5Z56_11110 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D E5Z56_05745 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D E5Z56_05095 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D E5Z56_06030 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D E5Z56_07175 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D E5Z56_06215 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D E5Z56_06225 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D E5Z56_08280 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D E5Z56_07360 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D E5Z56_04660 penicillin-binding protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D E5Z56_06210 PASTA domain-containing protein K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein) D E5Z56_03935 penicillin-binding protein K05364 pbpA; penicillin-binding protein A D E5Z56_08190 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D E5Z56_08475 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D E5Z56_00315 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D E5Z56_00300 D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D E5Z56_06435 class C sortase K07284 srtA; sortase A [EC:3.4.22.70] D E5Z56_06440 class C sortase K07284 srtA; sortase A [EC:3.4.22.70] D E5Z56_03180 sortase K07284 srtA; sortase A [EC:3.4.22.70] D E5Z56_03190 class C sortase K07284 srtA; sortase A [EC:3.4.22.70] D E5Z56_03195 class C sortase K07284 srtA; sortase A [EC:3.4.22.70] D E5Z56_00425 srtB; class B sortase K08600 srtB; sortase B [EC:3.4.22.71] D E5Z56_05575 class B sortase K08600 srtB; sortase B [EC:3.4.22.71] D E5Z56_09860 class B sortase K08600 srtB; sortase B [EC:3.4.22.71] D E5Z56_09875 srtB; class B sortase K08600 srtB; sortase B [EC:3.4.22.71] D E5Z56_06775 lytic transglycosylase domain-containing protein K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D E5Z56_08420 mltG; endolytic transglycosylase MltG K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D E5Z56_03910 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D E5Z56_10520 cell wall hydrolase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D E5Z56_02500 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] C 01004 Lipid biosynthesis proteins [BR:ruj01004] D E5Z56_07375 ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D E5Z56_01030 fabF; beta-ketoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D E5Z56_07385 fabF; beta-ketoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D E5Z56_05920 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D E5Z56_07380 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D E5Z56_07395 beta-hydroxyacyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D E5Z56_07370 fabK; enoyl-[acyl-carrier-protein] reductase FabK K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9] D E5Z56_01895 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D E5Z56_04925 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D E5Z56_01025 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D E5Z56_11045 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D E5Z56_08230 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D E5Z56_11360 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins C 01006 Prenyltransferases [BR:ruj01006] D E5Z56_09175 polyprenyl synthetase family protein K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D E5Z56_11200 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D E5Z56_10940 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] C 01007 Amino acid related enzymes [BR:ruj01007] D E5Z56_08700 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D E5Z56_05925 glutamine--tRNA ligase/YqeY domain fusion protein K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D E5Z56_08295 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D E5Z56_04065 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D E5Z56_03455 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D E5Z56_07185 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D E5Z56_04305 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D E5Z56_10910 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D E5Z56_04375 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D E5Z56_10995 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D E5Z56_03685 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D E5Z56_04640 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D E5Z56_07270 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D E5Z56_04645 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D E5Z56_08125 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D E5Z56_04815 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D E5Z56_06605 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D E5Z56_00305 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D E5Z56_08430 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D E5Z56_01915 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D E5Z56_01910 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D E5Z56_07300 LL-diaminopimelate aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83] D E5Z56_09335 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K10907 K10907; aminotransferase [EC:2.6.1.-] D E5Z56_00445 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D E5Z56_03805 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D E5Z56_10335 aspartate aminotransferase family protein K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D E5Z56_09470 hemL; glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D E5Z56_10155 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D E5Z56_06300 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:ruj00194] D E5Z56_00460 atpC; ATP synthase F1 subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D E5Z56_00465 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D E5Z56_00470 atpG; ATP synthase F1 subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D E5Z56_00475 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D E5Z56_00480 atpH; ATP synthase F1 subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D E5Z56_00485 atpF; F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D E5Z56_00490 atpE; ATP synthase F0 subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D E5Z56_00510 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:ruj03000] D E5Z56_05325 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D E5Z56_09600 LysR family transcriptional regulator K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon D E5Z56_00375 DeoR/GlpR transcriptional regulator K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor D E5Z56_03980 spoIIID; sporulation transcriptional regulator SpoIIID K06283 spoIIID; putative DeoR family transcriptional regulator, stage III sporulation protein D D E5Z56_03265 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D E5Z56_03025 FadR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D E5Z56_06710 PLP-dependent aminotransferase family protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D E5Z56_07915 TetR/AcrR family transcriptional regulator K09017 rutR; TetR/AcrR family transcriptional regulator D E5Z56_03905 transcriptional repressor K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator D E5Z56_02720 Rrf2 family transcriptional regulator K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor D E5Z56_00155 Rrf2 family transcriptional regulator K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor D E5Z56_01330 Rrf2 family transcriptional regulator K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor D E5Z56_09475 Rrf2 family transcriptional regulator K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor D E5Z56_00930 helix-turn-helix transcriptional regulator K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor D E5Z56_05840 winged helix-turn-helix transcriptional regulator K26993 sdpR; ArsR family transcriptional regulator, repressor of sdpIR and other operons D E5Z56_03230 metal-dependent transcriptional regulator K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator D E5Z56_05855 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D E5Z56_03740 PucR family transcriptional regulator K02647 cdaR; carbohydrate diacid regulator D E5Z56_08985 redox-sensing transcriptional repressor Rex K01926 rex; redox-sensing transcriptional repressor D E5Z56_04035 helix-turn-helix transcriptional regulator K07727 K07727; putative transcriptional regulator D E5Z56_08675 helix-turn-helix transcriptional regulator K07727 K07727; putative transcriptional regulator D E5Z56_06720 helix-turn-helix transcriptional regulator K07727 K07727; putative transcriptional regulator D E5Z56_00800 helix-turn-helix transcriptional regulator K07729 K07729; putative transcriptional regulator D E5Z56_01580 helix-turn-helix transcriptional regulator K07729 K07729; putative transcriptional regulator D E5Z56_01510 metal-sensing transcriptional repressor K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor D E5Z56_02970 AbrB/MazE/SpoVT family DNA-binding domain-containing protein K06284 abrB; AbrB family transcriptional regulator, transcriptional pleiotropic regulator of transition state genes D E5Z56_03390 AbrB/MazE/SpoVT family DNA-binding domain-containing protein K04769 spoVT; AbrB family transcriptional regulator, stage V sporulation protein T D E5Z56_07815 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D E5Z56_04800 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D E5Z56_04810 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D E5Z56_00845 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D E5Z56_05380 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D E5Z56_05460 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D E5Z56_09930 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D E5Z56_02290 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D E5Z56_09195 argR; arginine repressor K03402 argR; transcriptional regulator of arginine metabolism D E5Z56_04340 hrcA; heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor D E5Z56_11415 thiamine phosphate synthase K10810 tenI; thiazole tautomerase (transcriptional regulator TenI) [EC:5.3.99.10] D E5Z56_01785 CtsR family transcriptional regulator K03708 ctsR; transcriptional regulator of stress and heat shock response D E5Z56_08340 nrdR; transcriptional repressor NrdR K07738 nrdR; transcriptional repressor NrdR D E5Z56_06195 division/cell wall cluster transcriptional repressor MraZ K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:ruj03021] D E5Z56_07075 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D E5Z56_06490 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D E5Z56_06495 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D E5Z56_00020 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D E5Z56_11500 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D E5Z56_00280 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D E5Z56_03170 sigma-70 family RNA polymerase sigma factor K03087 rpoS; RNA polymerase nonessential primary-like sigma factor D E5Z56_07490 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D E5Z56_01660 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D E5Z56_10305 sigma-70 family RNA polymerase sigma factor K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor D E5Z56_02230 sigG; RNA polymerase sporulation sigma factor SigG K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor D E5Z56_06615 sigma-70 family RNA polymerase sigma factor K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor D E5Z56_11260 sigE; RNA polymerase sporulation sigma factor SigE K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor D E5Z56_03425 sigma-70 family RNA polymerase sigma factor K27000 sigH; RNA polymerase sigma-H factor D E5Z56_04475 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA D E5Z56_11295 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB D E5Z56_07140 nusG; transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG D E5Z56_10635 hypothetical protein K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3] D E5Z56_03690 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA C 03019 Messenger RNA biogenesis [BR:ruj03019] D E5Z56_11040 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D E5Z56_08350 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-] D E5Z56_01445 rny; ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-] D E5Z56_00275 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D E5Z56_06340 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D E5Z56_04020 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D E5Z56_11275 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D E5Z56_04330 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D E5Z56_09290 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D E5Z56_04520 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D E5Z56_09160 rapZ; RNase adapter RapZ K06958 rapZ; RNase adapter protein RapZ C 03041 Spliceosome C 03011 Ribosome [BR:ruj03011] D E5Z56_02245 S1 RNA-binding domain-containing protein K02945 RP-S1; small subunit ribosomal protein S1 D E5Z56_11220 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D E5Z56_06960 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D E5Z56_07070 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D E5Z56_07015 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D E5Z56_08905 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D E5Z56_06505 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D E5Z56_07000 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D E5Z56_04880 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D E5Z56_06925 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D E5Z56_07065 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D E5Z56_06500 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D E5Z56_07060 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D E5Z56_06995 type Z 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D E5Z56_04015 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D E5Z56_06145 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D E5Z56_06975 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D E5Z56_08915 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D E5Z56_06950 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D E5Z56_04350 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D E5Z56_10990 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D E5Z56_07150 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D E5Z56_06945 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D E5Z56_06930 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D E5Z56_06935 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D E5Z56_06990 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D E5Z56_07005 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D E5Z56_08360 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D E5Z56_07155 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D E5Z56_07145 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D E5Z56_07160 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D E5Z56_04875 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D E5Z56_06980 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D E5Z56_07025 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D E5Z56_06965 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D E5Z56_07080 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D E5Z56_07010 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D E5Z56_10895 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D E5Z56_11070 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D E5Z56_08875 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D E5Z56_06955 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D E5Z56_06940 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D E5Z56_06985 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D E5Z56_08885 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D E5Z56_08445 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D E5Z56_06970 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D E5Z56_07020 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D E5Z56_00295 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D E5Z56_08220 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D E5Z56_07130 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D E5Z56_04755 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D E5Z56_11075 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D E5Z56_07055 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 C 03009 Ribosome biogenesis [BR:ruj03009] D E5Z56_11040 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D E5Z56_06120 GTPase Era K03595 era; GTPase D E5Z56_08895 obgE; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-] D E5Z56_04475 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA D E5Z56_11295 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB D E5Z56_07140 nusG; transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG D E5Z56_03750 rRNA pseudouridine synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] D E5Z56_03920 rsmA; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D E5Z56_11475 rsmB; 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D E5Z56_06180 rsmD; 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D E5Z56_05015 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D E5Z56_04795 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D E5Z56_06200 rsmH; 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D E5Z56_06635 rsmI; 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D E5Z56_09185 TlyA family RNA methyltransferase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D E5Z56_04120 methyltransferase domain-containing protein K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187] D E5Z56_05810 rlmB; 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D E5Z56_03405 rlmH; 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D E5Z56_01210 SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D E5Z56_11470 rlmN; 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D E5Z56_00685 rlmD; 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D E5Z56_00700 rlmD; 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D E5Z56_08480 rRNA pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D E5Z56_09045 RluA family pseudouridine synthase K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D E5Z56_10150 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D E5Z56_10900 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D E5Z56_01520 rimI; ribosomal-protein-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D E5Z56_06160 rimM; 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM D E5Z56_03475 rimO; 30S ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4] D E5Z56_04355 50S ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] D E5Z56_03090 ruvX; Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D E5Z56_08900 ribonuclease III K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-] D E5Z56_11455 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D E5Z56_08225 ribosome biogenesis GTPase Der K03977 engA; GTPase D E5Z56_10730 ylqF; ribosome biogenesis GTPase YlqF K14540 rbgA; ribosome biogenesis GTPase A D E5Z56_06735 hflX; GTPase HflX K03665 hflX; GTPase D E5Z56_09210 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D E5Z56_04495 rbfA; 30S ribosome-binding factor RbfA K02834 rbfA; ribosome-binding factor A D E5Z56_04470 ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP D E5Z56_04740 RNA-binding S4 domain-containing protein K14761 rlbA; ribosome-associated protein D E5Z56_11000 rsfS; ribosome silencing factor K09710 ybeB; ribosome-associated protein D E5Z56_06125 ybeY; rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor D E5Z56_11015 YhbY family RNA-binding protein K07574 yhbY; RNA-binding protein D E5Z56_09275 raiA; ribosome-associated translation inhibitor RaiA K05808 hpf; ribosome hibernation promoting factor D E5Z56_03770 ychF; redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase D E5Z56_08215 DUF177 domain-containing protein K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:ruj03016] D E5Z56_01365 MBL fold metallo-hydrolase K00784 rnz; ribonuclease Z [EC:3.1.26.11] D E5Z56_11130 CCA tRNA nucleotidyltransferase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] D E5Z56_07445 RtcB family protein K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8] D E5Z56_08700 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D E5Z56_06605 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D E5Z56_10910 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D E5Z56_10995 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D E5Z56_04305 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D E5Z56_05925 glutamine--tRNA ligase/YqeY domain fusion protein K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D E5Z56_07185 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D E5Z56_03685 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D E5Z56_04640 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D E5Z56_07270 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D E5Z56_08430 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D E5Z56_08125 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D E5Z56_00305 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D E5Z56_04815 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D E5Z56_03455 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D E5Z56_04375 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D E5Z56_04645 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D E5Z56_01915 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D E5Z56_01910 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D E5Z56_08295 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D E5Z56_04065 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D E5Z56_09215 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D E5Z56_08235 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D E5Z56_03515 trmB; tRNA (guanosine(46)-N7)-methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D E5Z56_01190 truA; tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D E5Z56_04505 truB; tRNA pseudouridine(55) synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D E5Z56_06460 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D E5Z56_02710 nifS; cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D E5Z56_10940 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D E5Z56_04780 mnmE; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D E5Z56_04785 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D E5Z56_04760 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D E5Z56_11440 ybaK; Cys-tRNA(Pro) deacylase K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-] D E5Z56_11090 nucleoside deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D E5Z56_07230 dusB; tRNA dihydrouridine synthase DusB K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D E5Z56_10960 miaB; tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D E5Z56_10125 mtaB; tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase MtaB K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5] D E5Z56_11050 methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74] D E5Z56_06165 trmD; tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D E5Z56_03440 SAM-dependent methyltransferase K06967 trmK; tRNA (adenine22-N1)-methyltransferase [EC:2.1.1.217] D E5Z56_03575 trmL; tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D E5Z56_11065 RNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family D E5Z56_03790 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D E5Z56_04935 tRNA 2-thiocytidine biosynthesis protein TtcA K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA D E5Z56_10190 queA; tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D E5Z56_08115 epoxyqueuosine reductase QueH K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6] D E5Z56_10185 tgt; tRNA guanosine(34) transglycosylase Tgt K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D E5Z56_06465 thiI; tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D E5Z56_08370 tilS; tRNA lysidine(34) synthetase TilS K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D E5Z56_09585 tsaB; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D E5Z56_01515 tsaD; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D E5Z56_09580 tsaE; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D E5Z56_02715 tRNA threonylcarbamoyladenosine dehydratase K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase D E5Z56_08505 nucleotidyltransferase family protein K27343 tmcAL; tRNAmet cytidine acetate ligase [EC:6.3.1.22] D E5Z56_04020 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:ruj03012] D E5Z56_04490 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D E5Z56_11080 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D E5Z56_02445 ABC-F family ATP-binding cassette domain-containing protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3 D E5Z56_11215 elongation factor Ts K02357 tsf; elongation factor Ts D E5Z56_06515 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D E5Z56_06320 elongation factor G K02355 fusA; elongation factor G D E5Z56_06510 fusA; elongation factor G K02355 fusA; elongation factor G D E5Z56_06765 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D E5Z56_11205 ribosome recycling factor K02838 frr; ribosome recycling factor D E5Z56_03490 prmC; peptide chain release factor N(5)-glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D E5Z56_00600 aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D E5Z56_07050 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D E5Z56_10975 efp; elongation factor P K02356 efp; elongation factor P D E5Z56_00210 peptide chain release factor 2 K02836 prfB; peptide chain release factor 2 D E5Z56_10260 peptide chain release factor 3 K02837 prfC; peptide chain release factor 3 C 03110 Chaperones and folding catalysts [BR:ruj03110] D E5Z56_01170 ATP-dependent Clp protease ATP-binding subunit K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC D E5Z56_10690 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D E5Z56_04125 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG D E5Z56_04330 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D E5Z56_09290 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D E5Z56_04325 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D E5Z56_00105 J domain-containing protein K03686 dnaJ; molecular chaperone DnaJ D E5Z56_02215 Hsp33 family molecular chaperone HslO K04083 hslO; molecular chaperone Hsp33 D E5Z56_04335 nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE D E5Z56_05440 Hsp20/alpha crystallin family protein K13993 HSP20; HSP20 family protein D E5Z56_09285 co-chaperone GroES K04078 groES; chaperonin GroES D E5Z56_04000 trypsin-like serine protease K04771 degP; serine protease Do [EC:3.4.21.107] D E5Z56_01390 PDZ domain-containing protein K04771 degP; serine protease Do [EC:3.4.21.107] D E5Z56_08380 hflB; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D E5Z56_00510 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D E5Z56_02255 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D E5Z56_05905 peptidylprolyl isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D E5Z56_09495 thiol reductase thioredoxin K03671 TXN; thioredoxin D E5Z56_01340 trxA; thioredoxin K03671 TXN; thioredoxin D E5Z56_06390 thioredoxin family protein K03671 TXN; thioredoxin C 04131 Membrane trafficking [BR:ruj04131] D E5Z56_01450 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D E5Z56_04115 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D E5Z56_04125 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG C 04121 Ubiquitin system C 03051 Proteasome [BR:ruj03051] D E5Z56_04125 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG C 03032 DNA replication proteins [BR:ruj03032] D E5Z56_08345 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D E5Z56_05325 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D E5Z56_09245 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D E5Z56_04750 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D E5Z56_08365 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D E5Z56_00180 ATP-binding protein K02315 dnaC; DNA replication protein DnaC D E5Z56_00285 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D E5Z56_08910 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D E5Z56_11280 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D E5Z56_11175 PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D E5Z56_04745 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D E5Z56_08250 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D E5Z56_06655 hypothetical protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D E5Z56_00740 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D E5Z56_10725 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D E5Z56_00965 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D E5Z56_11340 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D E5Z56_04710 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D E5Z56_10020 topoisomerase IV K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D E5Z56_04715 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D E5Z56_10015 DNA topoisomerase K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D E5Z56_11055 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:ruj03036] D E5Z56_05325 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D E5Z56_11040 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D E5Z56_09245 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D E5Z56_04750 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D E5Z56_11030 smc; chromosome segregation protein SMC K03529 smc; chromosome segregation protein D E5Z56_08455 serine protease K05896 scpA; segregation and condensation protein A D E5Z56_08460 scpB; SMC-Scp complex subunit ScpB K06024 scpB; segregation and condensation protein B D E5Z56_03735 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D E5Z56_08285 DUF87 domain-containing protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D E5Z56_06205 hypothetical protein K03586 ftsL; cell division protein FtsL D E5Z56_06235 FtsQ-type POTRA domain-containing protein K03589 ftsQ; cell division protein FtsQ D E5Z56_06220 cell division protein FtsW K03588 ftsW; cell division protein FtsW D E5Z56_03940 FHA domain-containing protein K03588 ftsW; cell division protein FtsW D E5Z56_03730 ABC transporter permease K09811 ftsX; cell division transport system permease protein D E5Z56_06240 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D E5Z56_04695 cell division protein ZapA K09888 zapA; cell division protein ZapA D E5Z56_03910 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D E5Z56_10520 cell wall hydrolase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D E5Z56_02500 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D E5Z56_04655 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D E5Z56_10915 DivIVA domain-containing protein K04074 divIVA; cell division initiation protein D E5Z56_10925 cell division protein SepF K09772 sepF; cell division inhibitor SepF D E5Z56_08130 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D E5Z56_04675 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D E5Z56_04670 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC D E5Z56_09570 rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA D E5Z56_04805 ParA family protein K03496 parA; chromosome partitioning protein D E5Z56_05455 ParA family protein K03496 parA; chromosome partitioning protein D E5Z56_07815 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D E5Z56_04800 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D E5Z56_04810 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D E5Z56_00845 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D E5Z56_05380 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D E5Z56_05460 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D E5Z56_09930 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D E5Z56_02290 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D E5Z56_04785 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D E5Z56_04795 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D E5Z56_11050 methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74] D E5Z56_10535 tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC D E5Z56_07695 integrase K04763 xerD; integrase/recombinase XerD D E5Z56_08560 recombinase XerC K04763 xerD; integrase/recombinase XerD D E5Z56_08435 hypothetical protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D E5Z56_09060 cell filamentation protein Fic K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D E5Z56_10455 cell filamentation protein Fic K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D E5Z56_10680 YihA family ribosome biogenesis GTP-binding protein K03978 engB; GTP-binding protein D E5Z56_09165 whiA; DNA-binding protein WhiA K09762 whiA; cell division protein WhiA C 03400 DNA repair and recombination proteins [BR:ruj03400] D E5Z56_10390 methylated-DNA--[protein]-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D E5Z56_04855 DNA-3-methyladenine glycosylase 2 family protein K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18] D E5Z56_04255 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D E5Z56_05220 (deoxy)nucleoside triphosphate pyrophosphohydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D E5Z56_01555 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D E5Z56_00575 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D E5Z56_04685 dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D E5Z56_07120 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D E5Z56_08090 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D E5Z56_02575 deoxyribonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D E5Z56_09205 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D E5Z56_11340 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D E5Z56_00965 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D E5Z56_08385 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A D E5Z56_10010 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B D E5Z56_06175 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C D E5Z56_00140 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D E5Z56_06490 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D E5Z56_06495 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D E5Z56_07075 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D E5Z56_00020 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D E5Z56_11500 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D E5Z56_00595 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D E5Z56_10950 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D E5Z56_02535 DNA mismatch repair protein K03555 mutS; DNA mismatch repair protein MutS D E5Z56_06110 endonuclease MutS2 K07456 mutS2; DNA mismatch repair protein MutS2 D E5Z56_10945 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL D E5Z56_11285 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D E5Z56_09170 xseB; exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D E5Z56_11280 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D E5Z56_11175 PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D E5Z56_04745 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D E5Z56_08250 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D E5Z56_06655 hypothetical protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D E5Z56_00740 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D E5Z56_08910 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D E5Z56_05345 very short patch repair endonuclease K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-] D E5Z56_08140 ATP-dependent RecD-like DNA helicase K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D E5Z56_03485 recA; recombinase RecA K03553 recA; recombination protein RecA D E5Z56_01225 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA D E5Z56_01220 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D E5Z56_01230 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D E5Z56_08035 SMC family ATPase K03546 sbcC; DNA repair protein SbcC/Rad50 D E5Z56_08030 exonuclease SbcCD subunit D K03547 sbcD; DNA repair protein SbcD/Mre11 D E5Z56_10525 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms D E5Z56_04735 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF D E5Z56_00325 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D E5Z56_06115 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D E5Z56_00750 recR; recombination protein RecR K06187 recR; recombination protein RecR D E5Z56_09200 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D E5Z56_09355 addA; helicase-exonuclease AddAB subunit AddA K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-] D E5Z56_09350 hypothetical protein K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-] D E5Z56_07630 cas1; type II CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1 D E5Z56_03330 cas1c; type I-C CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1 D E5Z56_09830 cas1; type II CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1 D E5Z56_04710 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D E5Z56_10020 topoisomerase IV K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D E5Z56_04715 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D E5Z56_10015 DNA topoisomerase K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D E5Z56_11055 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D E5Z56_09245 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D E5Z56_05685 DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D E5Z56_11540 DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D E5Z56_05050 lexA; transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88] D E5Z56_03480 regulatory protein RecX K03565 recX; regulatory protein D E5Z56_04050 NUDIX domain-containing protein K23258 mutT1; 8-oxo-(d)GTP phosphatase [EC:3.6.1.69] D E5Z56_04500 bifunctional oligoribonuclease/PAP phosphatase NrnA K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] C 03029 Mitochondrial biogenesis [BR:ruj03029] D E5Z56_04490 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D E5Z56_11080 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D E5Z56_11215 elongation factor Ts K02357 tsf; elongation factor Ts D E5Z56_06515 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D E5Z56_06320 elongation factor G K02355 fusA; elongation factor G D E5Z56_06510 fusA; elongation factor G K02355 fusA; elongation factor G D E5Z56_06120 GTPase Era K03595 era; GTPase D E5Z56_08295 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D E5Z56_10995 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D E5Z56_04640 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D E5Z56_07270 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D E5Z56_08125 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D E5Z56_07185 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D E5Z56_07280 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D E5Z56_07285 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D E5Z56_07275 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D E5Z56_08910 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D E5Z56_04330 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D E5Z56_04335 nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE D E5Z56_09290 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D E5Z56_09285 co-chaperone GroES K04078 groES; chaperonin GroES D E5Z56_04325 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D E5Z56_00105 J domain-containing protein K03686 dnaJ; molecular chaperone DnaJ D E5Z56_06460 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D E5Z56_02710 nifS; cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D E5Z56_04770 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D E5Z56_04125 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:ruj02000] D E5Z56_10315 ABC transporter ATP-binding protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-] D E5Z56_10320 ABC transporter ATP-binding protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-] D E5Z56_02815 ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D E5Z56_08705 ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D E5Z56_08710 ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D E5Z56_02810 ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D E5Z56_08955 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D E5Z56_09425 sulfate ABC transporter substrate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D E5Z56_09430 cysT; sulfate ABC transporter permease subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein D E5Z56_09435 cysW; sulfate ABC transporter permease subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein D E5Z56_09440 ABC transporter ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D E5Z56_10765 spermidine/putrescine ABC transporter substrate-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein D E5Z56_10770 ABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein D E5Z56_10775 ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein D E5Z56_10780 ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D E5Z56_09805 ABC transporter permease subunit K05845 opuC; osmoprotectant transport system substrate-binding protein D E5Z56_09800 ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D E5Z56_03745 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D E5Z56_01885 ABC transporter substrate-binding protein K25086 musE; maltose transport system substrate-binding protein D E5Z56_01880 sugar ABC transporter permease K25087 musF; maltose transport system permease protein D E5Z56_01875 carbohydrate ABC transporter permease K25088 musG; maltose transport system permease protein D E5Z56_05750 hypothetical protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein D E5Z56_05755 sugar ABC transporter permease K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D E5Z56_05760 sugar ABC transporter permease K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D E5Z56_03545 extracellular solute-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D E5Z56_03550 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein D E5Z56_03555 carbohydrate ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein D E5Z56_02570 extracellular solute-binding protein K02040 pstS; phosphate transport system substrate-binding protein D E5Z56_02565 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein D E5Z56_02560 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein D E5Z56_02555 pstB; phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D E5Z56_04270 transporter substrate-binding domain-containing protein K10036 glnH; glutamine transport system substrate-binding protein D E5Z56_09010 basic amino acid ABC transporter substrate-binding protein K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein D E5Z56_09015 amino acid ABC transporter permease K17077 artQ; arginine/lysine/histidine transport system permease protein D E5Z56_09020 amino acid ABC transporter ATP-binding protein K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1] D E5Z56_01050 ABC transporter substrate-binding protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein D E5Z56_05930 ABC transporter substrate-binding protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein D E5Z56_01045 ABC transporter permease K05832 K05832; putative tryptophan/tyrosine transport system permease protein D E5Z56_05935 ABC transporter permease K05832 K05832; putative tryptophan/tyrosine transport system permease protein D E5Z56_01040 ATP-binding cassette domain-containing protein K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein D E5Z56_05940 ABC transporter ATP-binding protein K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein D E5Z56_02790 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D E5Z56_02785 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D E5Z56_04200 hypothetical protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D E5Z56_09110 zinc ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein D E5Z56_09120 metal ABC transporter permease K09816 znuB; zinc transport system permease protein D E5Z56_09115 ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D E5Z56_03785 biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component D E5Z56_01950 ECF transporter S component K16927 cbrT; energy-coupling factor transport system substrate-specific component D E5Z56_01195 energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein D E5Z56_01960 energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein D E5Z56_01205 energy-coupling factor transporter ATPase K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D E5Z56_01200 energy-coupling factor transporter ATPase K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D E5Z56_01955 energy-coupling factor ABC transporter ATP-binding protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D E5Z56_02775 ABC transporter permease K11051 cylB; multidrug/hemolysin transport system permease protein D E5Z56_02770 ABC transporter ATP-binding protein K11050 cylA; multidrug/hemolysin transport system ATP-binding protein D E5Z56_02265 hypothetical protein K09692 tagG; teichoic acid transport system permease protein D E5Z56_02270 ABC transporter ATP-binding protein K09693 tagH; teichoic acid transport system ATP-binding protein [EC:7.5.2.4] D E5Z56_04455 ABC transporter K25151 gldF; gliding motility-associated transport system permease protein D E5Z56_04460 ATP-binding cassette domain-containing protein K25152 gldA; gliding motility-associated transport system ATP-binding protein D E5Z56_04450 hypothetical protein K25153 gldG; gliding motility-associatede transport system auxiliary component D E5Z56_07925 hypothetical protein K25147 berB; beta-exotoxin I transport system permease protein D E5Z56_07920 ABC transporter ATP-binding protein K25148 berA; beta-exotoxin I transport system ATP-binding protein D E5Z56_03730 ABC transporter permease K09811 ftsX; cell division transport system permease protein D E5Z56_03735 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D E5Z56_00635 multidrug ABC transporter permease K25154 evrC; viologen exporter family transport system permease protein D E5Z56_00640 ABC transporter permease K25155 evrB; viologen exporter family transport system permease protein D E5Z56_00645 ATP-binding cassette domain-containing protein K25156 evrA; viologen exporter family transport system ATP-binding protein D E5Z56_07930 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D E5Z56_07205 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D E5Z56_07200 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D E5Z56_10575 ATP-binding cassette domain-containing protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D E5Z56_04080 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein D E5Z56_05900 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein D E5Z56_01500 ABC transporter ATP-binding protein/permease K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D E5Z56_10490 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein D E5Z56_10495 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein D E5Z56_01845 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein D E5Z56_04085 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D E5Z56_09760 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D E5Z56_05895 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D E5Z56_10500 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D E5Z56_01850 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D E5Z56_10090 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump D E5Z56_05145 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump D E5Z56_00925 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump D E5Z56_01090 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump D E5Z56_10325 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump D E5Z56_11535 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump D E5Z56_09980 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump D E5Z56_09395 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump D E5Z56_08305 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump D E5Z56_05110 MFS transporter K08369 ydjE; MFS transporter, putative metabolite:H+ symporter D E5Z56_00395 ptsP; phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D E5Z56_00390 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr D E5Z56_06170 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr D E5Z56_00385 PTS fructose transporter subunit IIC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D E5Z56_05360 MIP family channel protein K06188 aqpZ; aquaporin Z D E5Z56_08010 two pore domain potassium channel family protein K10716 kch; voltage-gated potassium channel D E5Z56_00115 ammonium transporter K03320 amt; ammonium transporter, Amt family D E5Z56_07330 amt; ammonium transporter K03320 amt; ammonium transporter, Amt family D E5Z56_10785 formate/nitrite transporter family protein K21993 fdhC; formate transporter D E5Z56_00520 mechanosensitive ion channel K03442 mscS; small conductance mechanosensitive channel D E5Z56_04250 mgtE; magnesium transporter K06213 mgtE; magnesium transporter D E5Z56_05065 mgtE; magnesium transporter K06213 mgtE; magnesium transporter D E5Z56_00940 hypothetical protein K03284 corA; magnesium transporter D E5Z56_04530 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family D E5Z56_08270 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family D E5Z56_03035 CidA/LrgA family protein K06518 cidA; holin-like protein D E5Z56_03260 melB; melibiose:sodium transporter MelB K11104 melB; melibiose permease D E5Z56_06335 ZIP family metal transporter K07238 TC.ZIP; zinc transporter, ZIP family D E5Z56_10360 calcium/sodium antiporter K07301 yrbG; cation:H+ antiporter D E5Z56_06840 sodium/proline symporter K11928 putP; sodium/proline symporter D E5Z56_10760 gltS; sodium/glutamate symporter K03312 gltS; glutamate:Na+ symporter, ESS family D E5Z56_04915 cation:proton antiporter K26730 napA; Na+:H+ antiporter D E5Z56_06015 TrkH family potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein D E5Z56_06010 trkA; Trk system potassium transporter TrkA K03499 trkA; trk/ktr system potassium uptake protein D E5Z56_08970 uracil-xanthine permease K02824 uraA; uracil permease D E5Z56_00550 NCS2 family permease K06901 pbuG; adenine/guanine/hypoxanthine permease D E5Z56_05990 chloride channel protein K03281 clcA; chloride channel protein, CIC family D E5Z56_06485 voltage-gated chloride channel protein K03281 clcA; chloride channel protein, CIC family D E5Z56_01615 hypothetical protein K07240 chrA; chromate transporter D E5Z56_03395 Na/Pi cotransporter family protein K03324 yjbB; phosphate:Na+ symporter D E5Z56_02545 Na/Pi cotransporter family protein K03324 yjbB; phosphate:Na+ symporter D E5Z56_09235 polysaccharide biosynthesis protein K06409 spoVB; stage V sporulation protein B D E5Z56_04235 AEC family transporter K24180 mleP; malate permease and related proteins D E5Z56_01115 AzlC family ABC transporter permease K26605 azlC; branched chain amino acid efflux pump D E5Z56_01110 AzlD domain-containing protein K26606 azlD; branched chain amino acid efflux pump D E5Z56_01305 ECF transporter S component K23675 fmnP; riboflavin transporter D E5Z56_01310 folate family ECF transporter S component K23675 fmnP; riboflavin transporter D E5Z56_05075 thiT; energy-coupled thiamine transporter ThiT K16789 thiT; thiamine transporter D E5Z56_00540 VUT family protein K09125 yhhQ; queuosine precursor transporter D E5Z56_06220 cell division protein FtsW K03588 ftsW; cell division protein FtsW D E5Z56_03940 FHA domain-containing protein K03588 ftsW; cell division protein FtsW D E5Z56_01075 sodium-translocating pyrophosphatase K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1] D E5Z56_09080 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D E5Z56_08495 oxaloacetate decarboxylase subunit alpha K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2] D E5Z56_08485 carboxyl transferase K01604 mmdA; methylmalonyl-CoA decarboxylase subunit alpha [EC:7.2.4.3] D E5Z56_08490 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma D E5Z56_09075 sodium pump decarboxylase K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta D E5Z56_06360 CpsD/CapB family tyrosine-protein kinase K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3] D E5Z56_06355 capsular polysaccharide biosynthesis protein K19420 epsA; protein tyrosine kinase modulator D E5Z56_04100 ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A D E5Z56_04105 ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A D E5Z56_04095 feoB; ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B D E5Z56_08500 feoB; ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B D E5Z56_09965 feoB; ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B D E5Z56_10365 ferrous iron transporter B K04759 feoB; ferrous iron transport protein B D E5Z56_01600 tryptophan-rich sensory protein K05770 TSPO; translocator protein C 02044 Secretion system [BR:ruj02044] D E5Z56_04040 helix-hairpin-helix domain-containing protein K02237 comEA; competence protein ComEA D E5Z56_04865 dCMP deaminase family protein K01493 comEB; dCMP deaminase [EC:3.5.4.12] D E5Z56_08245 ComEC/Rec2 family competence protein K02238 comEC; competence protein ComEC D E5Z56_05890 MBL fold metallo-hydrolase K02238 comEC; competence protein ComEC D E5Z56_05545 type IV secretory system conjugative DNA transfer family protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8] D E5Z56_03930 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D E5Z56_09100 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D E5Z56_07135 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D E5Z56_09105 protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D E5Z56_10025 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D E5Z56_07030 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D E5Z56_06140 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D E5Z56_11025 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D E5Z56_10180 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D E5Z56_04770 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase C 02042 Bacterial toxins [BR:ruj02042] D E5Z56_04530 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family D E5Z56_08270 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family D E5Z56_02795 hemolysin III family protein K11068 hlyIII; hemolysin III C 02022 Two-component system [BR:ruj02022] D E5Z56_07415 histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D E5Z56_07420 response regulator transcription factor K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP D E5Z56_03875 response regulator transcription factor K07775 resD; two-component system, OmpR family, response regulator ResD D E5Z56_11145 spo0A; sporulation transcription factor Spo0A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A D E5Z56_05185 hypothetical protein K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3] D E5Z56_05180 response regulator K02477 K02477; two-component system, LytTR family, response regulator D E5Z56_07320 ANTAR domain-containing protein K22010 pdtaR; two-component system, response regulator PdtaR C 02035 Bacterial motility proteins [BR:ruj02035] D E5Z56_04315 hypothetical protein K18475 fliB; lysine-N-methylase [EC:2.1.1.-] C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:ruj04812] D E5Z56_08130 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D E5Z56_04675 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D E5Z56_07685 ParM/StbA family protein K18640 parM; plasmid segregation protein ParM D E5Z56_07835 ParM/StbA family protein K18640 parM; plasmid segregation protein ParM D E5Z56_00825 ParM/StbA family protein K18640 parM; plasmid segregation protein ParM D E5Z56_09910 ParM/StbA family protein K18640 parM; plasmid segregation protein ParM D E5Z56_02310 ParM/StbA family protein K18640 parM; plasmid segregation protein ParM D E5Z56_06240 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D E5Z56_04655 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D E5Z56_04805 ParA family protein K03496 parA; chromosome partitioning protein D E5Z56_05455 ParA family protein K03496 parA; chromosome partitioning protein D E5Z56_07815 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D E5Z56_04800 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D E5Z56_04810 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D E5Z56_00845 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D E5Z56_05380 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D E5Z56_05460 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D E5Z56_09930 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D E5Z56_02290 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:ruj04147] D E5Z56_04125 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG D E5Z56_00275 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D E5Z56_06340 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D E5Z56_01450 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D E5Z56_03580 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D E5Z56_04115 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D E5Z56_02255 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D E5Z56_10715 hypothetical protein K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D E5Z56_09290 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D E5Z56_04330 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D E5Z56_08195 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D E5Z56_04825 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D E5Z56_06515 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D E5Z56_08235 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D E5Z56_05985 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D E5Z56_04925 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D E5Z56_01025 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D E5Z56_07035 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D E5Z56_08240 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D E5Z56_03835 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D E5Z56_03840 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D E5Z56_03255 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D E5Z56_00660 glgB; 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D E5Z56_07325 glutamine synthetase type III K01915 glnA; glutamine synthetase [EC:6.3.1.2] D E5Z56_09465 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D E5Z56_01495 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D E5Z56_06305 3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D E5Z56_10080 phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D E5Z56_03585 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] C 02048 Prokaryotic defense system [BR:ruj02048] D E5Z56_07630 cas1; type II CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1 D E5Z56_03330 cas1c; type I-C CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1 D E5Z56_09830 cas1; type II CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1 D E5Z56_07635 cas2; CRISPR-associated endonuclease Cas2 K09951 cas2; CRISPR-associated protein Cas2 D E5Z56_09835 cas2; CRISPR-associated endonuclease Cas2 K09951 cas2; CRISPR-associated protein Cas2 D E5Z56_09950 cas2; CRISPR-associated endonuclease Cas2 K09951 cas2; CRISPR-associated protein Cas2 D E5Z56_03325 cas2; CRISPR-associated endonuclease Cas2 K09951 cas2; CRISPR-associated protein Cas2 D E5Z56_03355 cas3; CRISPR-associated helicase Cas3' K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] D E5Z56_03335 cas4; CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] D E5Z56_01290 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K19089 cas5a_b_c; CRISPR-associated protein Cas5a/b/c D E5Z56_03345 cas8c; type I-C CRISPR-associated protein Cas8c/Csd1 K19117 csd1; CRISPR-associated protein Csd1 D E5Z56_03340 cas7c; type I-C CRISPR-associated protein Cas7/Csd2 K19118 csd2; CRISPR-associated protein Csd2 D E5Z56_03350 cas5c; type I-C CRISPR-associated protein Cas5 K19119 cas5d; CRISPR-associated protein Cas5d D E5Z56_07625 cas9; type II CRISPR RNA-guided endonuclease Cas9 K09952 csn1; CRISPR-associated endonuclease Csn1 [EC:3.1.-.-] D E5Z56_09825 cas9; type II CRISPR RNA-guided endonuclease Cas9 K09952 csn1; CRISPR-associated endonuclease Csn1 [EC:3.1.-.-] D E5Z56_09840 csn2; type II-A CRISPR-associated protein Csn2 K19137 csn2; CRISPR-associated protein Csn2 D E5Z56_08825 type I restriction endonuclease subunit R K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D E5Z56_05615 type I restriction endonuclease subunit R K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D E5Z56_02355 DEAD/DEAH box helicase K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D E5Z56_08800 hypothetical protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D E5Z56_08805 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D E5Z56_08815 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D E5Z56_05610 hypothetical protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D E5Z56_02365 hypothetical protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D E5Z56_08795 type I restriction-modification system subunit M K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D E5Z56_05595 restriction endonuclease subunit M/S K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D E5Z56_05605 SAM-dependent DNA methyltransferase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D E5Z56_02360 SAM-dependent DNA methyltransferase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D E5Z56_03675 site-specific DNA-methyltransferase K13581 ccrM; modification methylase [EC:2.1.1.72] D E5Z56_05325 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D E5Z56_00680 hypothetical protein K07452 mcrB; 5-methylcytosine-specific restriction enzyme B [EC:3.1.21.-] D E5Z56_05715 type II toxin-antitoxin system PemK/MazF family toxin K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D E5Z56_01940 type II toxin-antitoxin system PemK/MazF family toxin K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D E5Z56_02950 type II toxin-antitoxin system death-on-curing family toxin K07341 doc; death on curing protein D E5Z56_02945 type II toxin-antitoxin system Phd/YefM family antitoxin K19165 phd; antitoxin Phd D E5Z56_06240 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D E5Z56_08130 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D E5Z56_04675 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D E5Z56_08700 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D E5Z56_06460 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D E5Z56_02710 nifS; cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules C 01504 Antimicrobial resistance genes [BR:ruj01504] D E5Z56_06545 GNAT family N-acetyltransferase K18816 aac6-I; aminoglycoside 6'-N-acetyltransferase I [EC:2.3.1.82] D E5Z56_07885 tet(W); tetracycline resistance ribosomal protection protein Tet(W) K18220 tetM; ribosomal protection tetracycline resistance protein D E5Z56_05200 GTP-binding protein K18220 tetM; ribosomal protection tetracycline resistance protein D E5Z56_00300 D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:ruj00537] D E5Z56_01495 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D E5Z56_10715 hypothetical protein K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:ruj03100] D E5Z56_02135 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D E5Z56_02695 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D E5Z56_04955 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D E5Z56_08520 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D E5Z56_11435 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D E5Z56_01155 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D E5Z56_08320 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D E5Z56_06785 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D E5Z56_02105 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D E5Z56_02665 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D E5Z56_08550 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D E5Z56_02165 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D E5Z56_02205 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D E5Z56_02190 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D E5Z56_02155 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D E5Z56_01140 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D E5Z56_04840 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D E5Z56_02115 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D E5Z56_02675 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D E5Z56_08540 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D E5Z56_01160 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D E5Z56_00190 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D E5Z56_02160 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D E5Z56_02195 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D E5Z56_01150 tRNA-His K14226 tRNA-His; tRNA His D E5Z56_02130 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D E5Z56_02690 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D E5Z56_04960 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D E5Z56_08525 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D E5Z56_07425 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D E5Z56_07665 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D E5Z56_08850 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D E5Z56_09615 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D E5Z56_02280 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D E5Z56_01145 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D E5Z56_02120 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D E5Z56_02680 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D E5Z56_08535 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D E5Z56_04310 tRNA-Met K14230 tRNA-Met; tRNA Met D E5Z56_04835 tRNA-Met K14230 tRNA-Met; tRNA Met D E5Z56_06850 tRNA-Met K14230 tRNA-Met; tRNA Met D E5Z56_02200 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D E5Z56_06450 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D E5Z56_08315 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D E5Z56_08310 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D E5Z56_10880 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D E5Z56_06865 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D E5Z56_06880 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D E5Z56_04435 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D E5Z56_05730 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D E5Z56_06860 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D E5Z56_06875 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D E5Z56_02170 tRNA-Val K14237 tRNA-Val; tRNA Val D E5Z56_02210 tRNA-Val K14237 tRNA-Val; tRNA Val D E5Z56_00760 ssrA; transfer-messenger RNA K15035 ssrA; transfer-messenger RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D E5Z56_10115 iron-containing alcohol dehydrogenase K19955 adh2; alcohol dehydrogenase [EC:1.1.1.-] D E5Z56_09985 aldo/keto reductase K23107 yajO; 1-deoxyxylulose-5-phosphate synthase [EC:1.1.-.-] D E5Z56_00400 sulfide/dihydroorotate dehydrogenase-like FAD/NAD-binding protein K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D E5Z56_00975 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4] D E5Z56_02840 pflA; pyruvate formate lyase-activating protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D E5Z56_07430 radical SAM protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D E5Z56_01440 radical SAM protein K04070 pflX; putative pyruvate formate lyase activating enzyme [EC:1.97.1.4] D E5Z56_02625 methyltransferase domain-containing protein K00598 tam; trans-aconitate 2-methyltransferase [EC:2.1.1.144] D E5Z56_09280 class I SAM-dependent RNA methyltransferase K07444 ypsC; putative N6-adenine-specific DNA methylase [EC:2.1.1.-] D E5Z56_04895 sugar O-acetyltransferase K00633 lacA; galactoside O-acetyltransferase [EC:2.3.1.18] D E5Z56_03635 GNAT family N-acetyltransferase K03827 yjaB; putative acetyltransferase [EC:2.3.1.-] D E5Z56_03610 N-acetyltransferase K24217 mnaT; L-amino acid N-acyltransferase [EC:2.3.1.-] D E5Z56_08865 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D E5Z56_01475 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D E5Z56_00330 DAK2 domain-containing protein K07030 fakA; fatty acid kinase [EC:2.7.2.18] D E5Z56_10220 TIGR00159 family protein K18672 dacA; diadenylate cyclase [EC:2.7.7.85] D E5Z56_06620 anti-sigma F factor K06379 spoIIAB; stage II sporulation protein AB (anti-sigma F factor) [EC:2.7.11.1] D E5Z56_09150 hprK; HPr(Ser) kinase/phosphatase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-] D E5Z56_01775 protein arginine kinase K19405 mcsB; protein arginine kinase [EC:2.7.14.1] D E5Z56_03765 thioesterase K18700 flK; fluoroacetyl-CoA thioesterase [EC:3.1.2.29] D E5Z56_01020 acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D E5Z56_05770 stage II sporulation protein E K06382 spoIIE; stage II sporulation protein E [EC:3.1.3.16] D E5Z56_06345 capsular polysaccharide biosynthesis protein K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48] D E5Z56_11390 hypothetical protein K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48] D E5Z56_02850 PHP domain-containing protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97] D E5Z56_08355 DHH family phosphoesterase K22927 gdpP; cyclic-di-AMP phosphodiesterase [EC:3.1.4.59] D E5Z56_04300 TatD family deoxyribonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D E5Z56_08255 DUF4093 domain-containing protein K05985 rnmV; ribonuclease M5 [EC:3.1.26.8] D E5Z56_11580 lysozyme K01185 E3.2.1.17; lysozyme [EC:3.2.1.17] D E5Z56_00915 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D E5Z56_11490 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D E5Z56_03450 polysaccharide deacetylase family protein K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104] D E5Z56_00565 RidA family protein K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10] D E5Z56_01525 low molecular weight phosphatase family protein K20201 ywlE; protein arginine phosphatase [EC:3.9.1.2] D E5Z56_07965 oleate hydratase K10254 ohyA; oleate hydratase [EC:4.2.1.53] D E5Z56_01930 NAD(P)H-hydrate dehydratase K17758 nnrD; ADP-dependent NAD(P)H-hydrate dehydratase [EC:4.2.1.136] D E5Z56_00160 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K26365 cangL; canavanine-gamma-lyase [EC:4.4.1.43] D E5Z56_01545 NAD(P)H-hydrate epimerase K17759 NAXE; NAD(P)H-hydrate epimerase [EC:5.1.99.6] D E5Z56_01505 heavy metal translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9] D E5Z56_03080 cation-translocating P-type ATPase K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10] D E5Z56_00935 cadA; cadmium-translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21] D E5Z56_11135 HAD family hydrolase K12952 ctpE; cation-transporting P-type ATPase E [EC:7.2.2.-] C 99981 Carbohydrate metabolism D E5Z56_02580 sfsA; DNA/RNA nuclease SfsA K06206 sfsA; sugar fermentation stimulation protein A C 99982 Energy metabolism D E5Z56_02705 nifU; Fe-S cluster assembly scaffold protein NifU K04488 iscU; nitrogen fixation protein NifU and related proteins D E5Z56_07090 flavodoxin K03839 fldA; flavodoxin I C 99983 Lipid metabolism C 99984 Nucleotide metabolism C 99985 Amino acid metabolism D E5Z56_10930 YggS family pyridoxal phosphate-dependent enzyme K06997 yggS; PLP dependent protein C 99986 Glycan metabolism D E5Z56_04555 flippase-like domain-containing protein K07027 K07027; glycosyltransferase 2 family protein D E5Z56_10245 cell wall hydrolase K01449 cwlJ; cell wall hydrolase C 99987 Cofactor metabolism C 99988 Secondary metabolism C 99999 Others B B 09192 Unclassified: genetic information processing C 99973 Transcription D E5Z56_09990 RNA-binding transcriptional accessory protein K06959 tex; protein Tex D E5Z56_00030 DUF370 domain-containing protein K09777 remA; extracellular matrix regulatory protein A D E5Z56_11510 DUF370 domain-containing protein K09777 remA; extracellular matrix regulatory protein A D E5Z56_04730 DUF370 domain-containing protein K24648 remB; extracellular matrix regulatory protein B C 99974 Translation D E5Z56_09270 S1 RNA-binding domain-containing protein K07571 K07571; S1 RNA binding domain protein C 99975 Protein processing D E5Z56_01780 hypothetical protein K19411 mcsA; protein arginine kinase activator D E5Z56_10700 trigger factor K03545 tig; trigger factor D E5Z56_00755 smpB; SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein D E5Z56_03420 ATP-binding protein K07391 comM; magnesium chelatase family protein C 99976 Replication and repair D E5Z56_10385 DNA methyltransferase K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein D E5Z56_10005 hypothetical protein K03630 radC; DNA repair protein RadC D E5Z56_02240 rmuC; DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC D E5Z56_10720 YraN family protein K07460 yraN; putative endonuclease D E5Z56_03070 GIY-YIG nuclease family protein K07461 K07461; putative endonuclease D E5Z56_11060 dprA; DNA-protecting protein DprA K04096 smf; DNA processing protein D E5Z56_07240 replication-associated recombination protein A K07478 ycaJ; putative ATPase D E5Z56_07335 IS30 family transposase K07482 K07482; transposase, IS30 family D E5Z56_03320 IS30 family transposase K07482 K07482; transposase, IS30 family D E5Z56_02320 IS30 family transposase K07482 K07482; transposase, IS30 family D E5Z56_06825 IS30 family transposase K07482 K07482; transposase, IS30 family D E5Z56_06830 IS30 family transposase K07482 K07482; transposase, IS30 family D E5Z56_10135 IS30 family transposase K07482 K07482; transposase, IS30 family D E5Z56_07730 tnpB; IS66 family insertion sequence element accessory protein TnpB K07484 K07484; transposase D E5Z56_10865 tnpB; IS66 family insertion sequence element accessory protein TnpB K07484 K07484; transposase D E5Z56_02070 tnpB; IS66 family insertion sequence element accessory protein TnpB K07484 K07484; transposase D E5Z56_05235 tnpB; IS66 family insertion sequence element accessory protein TnpB K07484 K07484; transposase D E5Z56_05305 tnpB; IS66 family insertion sequence element accessory protein TnpB K07484 K07484; transposase D E5Z56_09770 IS66 family transposase K07484 K07484; transposase D E5Z56_09780 tnpB; IS66 family insertion sequence element accessory protein TnpB K07484 K07484; transposase D E5Z56_08600 tnpB; IS66 family insertion sequence element accessory protein TnpB K07484 K07484; transposase D E5Z56_08635 tnpB; IS66 family insertion sequence element accessory protein TnpB K07484 K07484; transposase D E5Z56_03705 tnpB; IS66 family insertion sequence element accessory protein TnpB K07484 K07484; transposase D E5Z56_03710 IS66 family transposase K07484 K07484; transposase D E5Z56_03660 IS110 family transposase K07486 K07486; transposase D E5Z56_04680 IS110 family transposase K07486 K07486; transposase D E5Z56_03820 transposase K07491 rayT; REP-associated tyrosine transposase D E5Z56_09850 IS3 family transposase K07497 K07497; putative transposase D E5Z56_05400 site-specific integrase K14059 int; integrase C 99979 Viral proteins C 99998 Others D E5Z56_00745 YbaB/EbfC family nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D E5Z56_00905 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family D E5Z56_05150 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family D E5Z56_01480 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family D E5Z56_01595 sodium:alanine symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family C 99978 Cell growth D E5Z56_10030 transcriptional regulator K06317 bofA; inhibitor of the pro-sigma K processing machinery D E5Z56_01000 spore coat protein CotJB K06333 cotJB; spore coat protein JB D E5Z56_01005 manganese catalase family protein K06334 cotJC; spore coat protein JC D E5Z56_04775 protein jag K06346 jag; spoIIIJ-associated protein D E5Z56_02965 spore maturation protein A K06373 spmA; spore maturation protein A D E5Z56_02960 spore maturation protein K06374 spmB; spore maturation protein B D E5Z56_06625 STAS domain-containing protein K06378 spoIIAA; stage II sporulation protein AA (anti-sigma F factor antagonist) D E5Z56_07220 stage II sporulation protein P K06385 spoIIP; stage II sporulation protein P D E5Z56_09345 stage II sporulation protein R K06387 spoIIR; stage II sporulation protein R D E5Z56_11335 hypothetical protein K06390 spoIIIAA; stage III sporulation protein AA D E5Z56_11325 spoIIIAC; stage III sporulation protein AC K06392 spoIIIAC; stage III sporulation protein AC D E5Z56_11320 hypothetical protein K06393 spoIIIAD; stage III sporulation protein AD D E5Z56_11315 hypothetical protein K06394 spoIIIAE; stage III sporulation protein AE D E5Z56_09070 spoIVA; stage IV sporulation protein A K06398 spoIVA; stage IV sporulation protein A D E5Z56_03140 recombinase family protein K06400 spoIVCA; site-specific DNA recombinase D E5Z56_07670 DUF4368 domain-containing protein K06400 spoIVCA; site-specific DNA recombinase D E5Z56_07810 DUF4368 domain-containing protein K06400 spoIVCA; site-specific DNA recombinase D E5Z56_02405 recombinase K06400 spoIVCA; site-specific DNA recombinase D E5Z56_02285 DUF4368 domain-containing protein K06400 spoIVCA; site-specific DNA recombinase D E5Z56_00855 recombinase family protein K06400 spoIVCA; site-specific DNA recombinase D E5Z56_09940 recombinase family protein K06400 spoIVCA; site-specific DNA recombinase D E5Z56_06455 spoVAC; stage V sporulation protein AC K06405 spoVAC; stage V sporulation protein AC D E5Z56_05795 spoVAD; stage V sporulation protein AD K06406 spoVAD; stage V sporulation protein AD D E5Z56_04465 spoVAE; stage V sporulation protein AE K06407 spoVAE; stage V sporulation protein AE D E5Z56_02940 spore germination protein K06408 spoVAF; stage V sporulation protein AF D E5Z56_08155 dpsA; dipicolinate synthase subunit DpsA K06410 spoVFA; dipicolinate synthase subunit A D E5Z56_08160 dipicolinate synthase subunit B K06411 spoVFB; dipicolinate synthase subunit B D E5Z56_00335 stage V sporulation protein S K06416 spoVS; stage V sporulation protein S D E5Z56_00345 hypothetical protein K06438 yqfD; similar to stage IV sporulation protein D E5Z56_09135 spore germination protein K06295 gerKA; spore germination protein KA C 99993 Cell motility C 99995 Signaling proteins D E5Z56_09000 typA; translational GTPase TypA K06207 typA; GTP-binding protein D E5Z56_00245 ACT domain-containing protein K07166 K07166; ACT domain-containing protein D E5Z56_06130 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins C 99992 Structural proteins D E5Z56_03130 hypothetical protein K07273 acm; lysozyme D E5Z56_03530 lysozyme K07273 acm; lysozyme C 99994 Others D E5Z56_02550 phoU; phosphate signaling complex protein PhoU K02039 phoU; phosphate transport system protein D E5Z56_05845 DUF1648 domain-containing protein K26996 sdpI; immunity protein, SdpI family B B 09194 Poorly characterized C 99996 General function prediction only D E5Z56_04260 HAD family hydrolase K07025 K07025; putative hydrolase of the HAD superfamily D E5Z56_04830 hypothetical protein K03095 sprL; SprT-like protein D E5Z56_05950 YhgE/Pip domain-containing protein K01421 yhgE; putative membrane protein D E5Z56_05025 hypothetical protein K08981 K08981; putative membrane protein C 99997 Function unknown D E5Z56_10590 radical SAM protein K06871 K06871; uncharacterized protein D E5Z56_03010 scfB; thioether cross-link-forming SCIFF peptide maturase K06871 K06871; uncharacterized protein D E5Z56_00980 TPM domain-containing protein K06872 K06872; uncharacterized protein D E5Z56_04205 ATP-binding protein K06923 K06923; uncharacterized protein D E5Z56_06900 HD family phosphohydrolase K06950 K06950; uncharacterized protein D E5Z56_06150 KH domain-containing protein K06960 K06960; uncharacterized protein D E5Z56_11480 zinc metallopeptidase K06973 K06973; uncharacterized protein D E5Z56_05045 pyridoxamine 5'-phosphate oxidase family protein K07005 K07005; uncharacterized protein D E5Z56_00515 aldo/keto reductase K07079 K07079; uncharacterized protein D E5Z56_10755 TAXI family TRAP transporter solute-binding subunit K07080 K07080; uncharacterized protein D E5Z56_06660 metallophosphoesterase K07095 K07095; uncharacterized protein D E5Z56_03975 hypothetical protein K07098 K07098; uncharacterized protein D E5Z56_00175 metallophosphoesterase K07098 K07098; uncharacterized protein D E5Z56_01565 hypothetical protein K07098 K07098; uncharacterized protein D E5Z56_01650 metallophosphoesterase K07098 K07098; uncharacterized protein D E5Z56_10705 serine/threonine protein phosphatase K07099 K07099; uncharacterized protein D E5Z56_01355 SDR family oxidoreductase K07124 K07124; uncharacterized protein D E5Z56_04625 sel1 repeat family protein K07126 K07126; uncharacterized protein D E5Z56_08785 ATP-binding protein K07133 K07133; uncharacterized protein D E5Z56_07475 ATP-binding protein K07133 K07133; uncharacterized protein D E5Z56_09375 hypothetical protein K07137 K07137; uncharacterized protein D E5Z56_01325 NAD(P)/FAD-dependent oxidoreductase K07137 K07137; uncharacterized protein D E5Z56_09420 TIGR01212 family radical SAM protein K07139 K07139; uncharacterized protein D E5Z56_00255 cytidylate kinase family protein K07149 K07149; uncharacterized protein D E5Z56_00875 hypothetical protein K07149 K07149; uncharacterized protein D E5Z56_03650 DUF554 domain-containing protein K07150 K07150; uncharacterized protein D E5Z56_04765 yidD; membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein D E5Z56_00250 PFL family protein K09157 K09157; uncharacterized protein D E5Z56_05030 hypothetical protein K09167 K09167; uncharacterized protein D E5Z56_02995 YaiI/YqxD family protein K09768 K09768; uncharacterized protein D E5Z56_08665 DUF378 domain-containing protein K09779 K09779; uncharacterized protein D E5Z56_06135 DNA-binding protein K09787 K09787; uncharacterized protein D E5Z56_08400 DUF2156 domain-containing protein K01163 K01163; uncharacterized protein D E5Z56_08880 ribosomal-processing cysteine protease Prp K07584 ysxB; uncharacterized protein D E5Z56_04480 YlxR family protein K07742 ylxR; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: September 23, 2024