+F Repair protein KO
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DNA Repair and Recombination Proteins - Rhododendron vialii
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AEukaryotic type
B SSBR (single strand breaks repair)
C Direct repair
D 131313969 uncharacterized protein LOC131313969 K10859 ALKBH2; DNA oxidative demethylase [EC:1.14.11.33]
D 131299181 DExH-box ATP-dependent RNA helicase DExH14 K18663 ASCC3; activating signal cointegrator complex subunit 3 [EC:5.6.2.4]
D 131334878 deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
C BER (base exicision repair)
D DNA glycosylases
E 131326088 uracil-DNA glycosylase, mitochondrial K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
E 131324308 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
E 131313263 adenine DNA glycosylase isoform X1 K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
E 131307451 uncharacterized protein LOC131307451 isoform X1 K10801 MBD4; methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
E 131307300 N-glycosylase/DNA lyase OGG1 K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
E 131311546 putative DNA glycosylase At3g47830 K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
E 131316523 endonuclease III homolog 1, chloroplastic-like isoform X1 K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D AP endonucleases
E 131304322 DNA-(apurinic or apyrimidinic site) endonuclease 2 isoform X1 K10772 APEX2; AP endonuclease 2 [EC:3.1.11.2]
D Long Patch-BER factors
E DNA polymerase delta complex
F 131303605 DNA polymerase delta catalytic subunit K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
F 131320738 DNA polymerase delta small subunit isoform X1 K02328 POLD2; DNA polymerase delta subunit 2
F 131331494 uncharacterized protein LOC131331494 K03504 POLD3; DNA polymerase delta subunit 3
F 131301499 uncharacterized protein LOC131301499 K03505 POLD4; DNA polymerase delta subunit 4
E DNA polymerase epsilon complex
F 131326500 DNA polymerase epsilon catalytic subunit A-like isoform X1 K02324 POLE; DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
F 131313716 DNA polymerase epsilon catalytic subunit A-like K02324 POLE; DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
F 131330753 DNA polymerase epsilon subunit B K02325 POLE2; DNA polymerase epsilon subunit 2 [EC:2.7.7.7]
F 131312641 DNA polymerase II subunit B4 isoform X1 K02326 POLE3; DNA polymerase epsilon subunit 3 [EC:2.7.7.7]
E 131320495 proliferating cell nuclear antigen-like K04802 PCNA; proliferating cell nuclear antigen
E 131307143 uncharacterized protein LOC131307143 K04802 PCNA; proliferating cell nuclear antigen
E 131328781 proliferating cell nuclear antigen-like K04802 PCNA; proliferating cell nuclear antigen
E 131329617 proliferating cell nuclear antigen-like isoform X1 K04802 PCNA; proliferating cell nuclear antigen
E 131316943 proliferating cell nuclear antigen isoform X1 K04802 PCNA; proliferating cell nuclear antigen
E 131316956 proliferating cell nuclear antigen-like K04802 PCNA; proliferating cell nuclear antigen
E 131326555 flap endonuclease 1 isoform X1 K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
E 131314968 DNA ligase 1 K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
D Short Patch-BER factors
E 131335472 DNA-repair protein XRCC1 isoform X1 K10803 XRCC1; DNA-repair protein XRCC1
D Other BER factors
E 131311301 tyrosyl-DNA phosphodiesterase 1 isoform X1 K10862 TDP1; tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
E 131326051 transcription factor bHLH140 isoform X1 K10863 APTX; aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
E 131331519 polynucleotide 3'-phosphatase ZDP isoform X1 K08073 PNKP; bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78]
E 131310106 DNA polymerase lambda isoform X1 K03512 POLL; DNA polymerase lambda [EC:2.7.7.7 4.2.99.-]
E 131321659 poly [ADP-ribose] polymerase 1 K24070 PARP1; poly [ADP-ribose] polymerase 1 [EC:2.4.2.30]
E 131312619 protein ADP-ribosyltransferase PARP3 K10798 PARP2_3_4; poly [ADP-ribose] polymerase 2/3/4 [EC:2.4.2.30]
E 131315062 poly [ADP-ribose] polymerase 2 K10798 PARP2_3_4; poly [ADP-ribose] polymerase 2/3/4 [EC:2.4.2.30]
C NER (nucleotide excision repair)
D GGR (global genome repair) factors
E XPC-HR23B-CETN2 complex
F 131304053 DNA repair protein RAD4 K10838 XPC; xeroderma pigmentosum group C-complementing protein
F 131304628 ubiquitin receptor RAD23d-like isoform X1 K10839 RAD23; UV excision repair protein RAD23
F 131335295 ubiquitin receptor RAD23b-like K10839 RAD23; UV excision repair protein RAD23
F 131335296 uncharacterized protein LOC131335296 K10839 RAD23; UV excision repair protein RAD23
F 131335297 uncharacterized protein LOC131335297 K10839 RAD23; UV excision repair protein RAD23
F 131310783 ubiquitin receptor RAD23c-like K10839 RAD23; UV excision repair protein RAD23
F 131298764 uncharacterized protein LOC131298764 K10839 RAD23; UV excision repair protein RAD23
F 131300608 ubiquitin receptor RAD23c-like K10839 RAD23; UV excision repair protein RAD23
E Cul4-DDB2 complex
F 131320017 uncharacterized protein LOC131320017 isoform X1 K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F 131325324 RING-box protein 1a isoform X1 K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F 131311724 RING-box protein 1a-like K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F 131317998 cullin-4-like isoform X1 K10609 CUL4; cullin 4
F 131312659 cullin-4-like K10609 CUL4; cullin 4
F 131313261 DNA damage-binding protein 1 K10610 DDB1; DNA damage-binding protein 1
F 131314317 protein DAMAGED DNA-BINDING 2 isoform X1 K10140 DDB2; DNA damage-binding protein 2
E NER4 complex
F 131302963 uncharacterized protein LOC131302963 isoform X1 K15082 RAD7; DNA repair protein RAD7
F 131320009 uncharacterized protein LOC131320009 isoform X1 K15082 RAD7; DNA repair protein RAD7
F 131330648 DNA repair protein RAD16 isoform X1 K15083 RAD16; DNA repair protein RAD16
D TCR (transcription coupled repair) factors
E DNA-directed RNA polymerase II complex
F 131302523 DNA-directed RNA polymerase II subunit RPB1-like isoform X1 K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]
F 131334500 DNA-directed RNA polymerase II subunit RPB1 K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]
F 131314560 DNA-directed RNA polymerase II subunit RPB2 K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6]
F 131330226 DNA-directed RNA polymerase II subunit RPB2-like isoform X1 K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6]
F 131308757 DNA-directed RNA polymerases II, IV and V subunit 3-like K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3
F 131326800 DNA-directed RNA polymerases II, IV and V subunit 3-like K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3
F 131335452 DNA-directed RNA polymerases IV and V subunit 4-like isoform X1 K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4
F 131313355 DNA-directed RNA polymerases IV and V subunit 4-like isoform X1 K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4
F 131316861 DNA-directed RNA polymerase II subunit 4 K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4
F 131318632 DNA-directed RNA polymerase V subunit 5A K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
F 131306465 DNA-directed RNA polymerases II and IV subunit 5A-like K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
F 131320774 DNA-directed RNA polymerases IV and V subunit 5B-like K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
F 131310167 DNA-directed RNA polymerases II and IV subunit 5A K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
F 131318860 DNA-directed RNA polymerases II and V subunit 6B-like isoform X1 K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
F 131325410 DNA-directed RNA polymerases II and V subunit 6B-like K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
F 131299879 DNA-directed RNA polymerases II and V subunit 6B-like K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
F 131302425 DNA-directed RNA polymerase II subunit RPB7 isoform X1 K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7
F 131316799 DNA-directed RNA polymerase II subunit RPB7-like K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7
F 131334204 DNA-directed RNA polymerases II and V subunit 8A-like K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
F 131312820 DNA-directed RNA polymerases II, IV and V subunit 8B-like K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
F 131315928 DNA-directed RNA polymerases II, IV and V subunit 9A K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9
F 131319993 DNA-directed RNA polymerase subunit 10-like protein K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5
F 131314937 DNA-directed RNA polymerase subunit 10-like protein K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5
F 131334332 DNA-directed RNA polymerases II, IV and V subunit 11 K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11
F 131323468 DNA-directed RNA polymerases II, IV and V subunit 12 K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4
F 131329538 DNA-directed RNA polymerases II, IV and V subunit 12-like K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4
E Cul4-CSA complex
F 131320017 uncharacterized protein LOC131320017 isoform X1 K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F 131325324 RING-box protein 1a isoform X1 K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F 131311724 RING-box protein 1a-like K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F 131317998 cullin-4-like isoform X1 K10609 CUL4; cullin 4
F 131312659 cullin-4-like K10609 CUL4; cullin 4
F 131313261 DNA damage-binding protein 1 K10610 DDB1; DNA damage-binding protein 1
F 131332029 WD repeat-containing protein ATCSA-1 K10570 ERCC8; DNA excision repair protein ERCC-8
E Other TCR factor
F 131313078 protein CHROMATIN REMODELING 8 K10841 ERCC6; DNA excision repair protein ERCC-6
F 131334555 UV-stimulated scaffold protein A homolog K23720 UVSSA; UV-stimulated scaffold protein A
F 131315978 transcription elongation factor 1 homolog K25829 ELOF1; transcription elongation factor 1
F 131331557 transcription elongation factor 1 homolog K25829 ELOF1; transcription elongation factor 1
D TFIIH complex
E 131314693 general transcription and DNA repair factor IIH helicase subunit XPB1 isoform X1 K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
E 131313528 general transcription and DNA repair factor IIH helicase subunit XPD K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
E 131321898 general transcription and DNA repair factor IIH subunit TFB1-1-like isoform X1 K03141 TFIIH1; transcription initiation factor TFIIH subunit 1
E 131336032 general transcription factor IIH subunit 2-like K03142 TFIIH2; transcription initiation factor TFIIH subunit 2
E 131307555 general transcription and DNA repair factor IIH subunit TFB4 isoform X1 K03143 TFIIH3; transcription initiation factor TFIIH subunit 3
E 131310186 general transcription and DNA repair factor IIH subunit TFB4-like isoform X1 K03143 TFIIH3; transcription initiation factor TFIIH subunit 3
E 131303321 general transcription and DNA repair factor IIH subunit TFB2-like isoform X1 K03144 TFIIH4; transcription initiation factor TFIIH subunit 4
E 131315874 general transcription and DNA repair factor IIH subunit TFB5 K10845 TTDA; TFIIH basal transcription factor complex TTD-A subunit
E 131331882 general transcription and DNA repair factor IIH subunit TFB5-like K10845 TTDA; TFIIH basal transcription factor complex TTD-A subunit
E 131336493 cyclin-dependent kinase D-3 K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
E 131334034 cyclin-H1-1-like isoform X1 K06634 CCNH; cyclin H
E 131326072 cyclin-H1-1 isoform X1 K06634 CCNH; cyclin H
E 131303127 uncharacterized protein LOC131303127 isoform X1 K10842 MNAT1; CDK-activating kinase assembly factor MAT1
E 131320350 uncharacterized protein LOC131320350 isoform X1 K10842 MNAT1; CDK-activating kinase assembly factor MAT1
E 131326394 uncharacterized protein LOC131326394 K10842 MNAT1; CDK-activating kinase assembly factor MAT1
E 131300033 uncharacterized protein LOC131300033 isoform X1 K10842 MNAT1; CDK-activating kinase assembly factor MAT1
D RPA (replication factor A)
E 131306640 replication protein A 70 kDa DNA-binding subunit A K07466 RFA1; replication factor A1
E 131325354 replication protein A 70 kDa DNA-binding subunit A K07466 RFA1; replication factor A1
E 131299170 replication protein A 70 kDa DNA-binding subunit B K07466 RFA1; replication factor A1
E 131333843 replication protein A 32 kDa subunit A-like K10739 RFA2; replication factor A2
E 131320899 replication protein A 32 kDa subunit B isoform X1 K10739 RFA2; replication factor A2
E 131323753 replication protein A 32 kDa subunit A-like K10739 RFA2; replication factor A2
E 131323936 replication protein A 32 kDa subunit A-like K10739 RFA2; replication factor A2
E 131328415 replication protein A 32 kDa subunit A-like K10739 RFA2; replication factor A2
E 131318899 replication protein A 14 kDa subunit B-like K10740 RPA3; replication factor A3
D Other NER factors
E 131327345 DNA excision repair protein ERCC-1 isoform X1 K10849 ERCC1; DNA excision repair protein ERCC-1
E 131333824 DNA repair endonuclease UVH1 isoform X1 K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-]
E 131304867 DNA repair protein UVH3 isoform X1 K10846 ERCC5; DNA excision repair protein ERCC-5
E 131314968 DNA ligase 1 K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
E 131299226 MMS19 nucleotide excision repair protein homolog K15075 MET18; DNA repair/transcription protein MET18/MMS19
E 131335081 cullin-3A-like K03869 CUL3; cullin 3
E 131310433 cullin-3A K03869 CUL3; cullin 3
E 131318663 uncharacterized protein LOC131318663 K03872 ELOC; elongin-C
E 131314159 uncharacterized protein LOC131314159 K03872 ELOC; elongin-C
E 131320353 polyubiquitin 9 isoform X1 K03873 ELOB; elongin-B
E 131330010 elongin-A K15077 ELA1; elongin-A
C MMR (mismatch excision repair)
D Mismatch and loop recognition factors
E 131335731 DNA mismatch repair protein MSH2 K08735 MSH2; DNA mismatch repair protein MSH2
E 131319567 DNA mismatch repair protein MSH3 isoform X1 K08736 MSH3; DNA mismatch repair protein MSH3
E 131304554 DNA mismatch repair protein MSH6 isoform X1 K08737 MSH6; DNA mismatch repair protein MSH6
E 131320183 DNA mismatch repair protein MSH7 K08737 MSH6; DNA mismatch repair protein MSH6
D MutL homologs
E 131311326 DNA mismatch repair protein MLH1 isoform X1 K08734 MLH1; DNA mismatch repair protein MLH1
E 131315086 DNA mismatch repair protein PMS1 isoform X1 K10858 PMS2; DNA mismatch repair protein PMS2
E 131304111 DNA mismatch repair protein MLH3 isoform X1 K08739 MLH3; DNA mismatch repair protein MLH3
D DNA polymerase delta complex
E 131303605 DNA polymerase delta catalytic subunit K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
E 131320738 DNA polymerase delta small subunit isoform X1 K02328 POLD2; DNA polymerase delta subunit 2
E 131331494 uncharacterized protein LOC131331494 K03504 POLD3; DNA polymerase delta subunit 3
E 131301499 uncharacterized protein LOC131301499 K03505 POLD4; DNA polymerase delta subunit 4
D RPA (replication factor A)
E 131306640 replication protein A 70 kDa DNA-binding subunit A K07466 RFA1; replication factor A1
E 131325354 replication protein A 70 kDa DNA-binding subunit A K07466 RFA1; replication factor A1
E 131299170 replication protein A 70 kDa DNA-binding subunit B K07466 RFA1; replication factor A1
E 131333843 replication protein A 32 kDa subunit A-like K10739 RFA2; replication factor A2
E 131320899 replication protein A 32 kDa subunit B isoform X1 K10739 RFA2; replication factor A2
E 131323753 replication protein A 32 kDa subunit A-like K10739 RFA2; replication factor A2
E 131323936 replication protein A 32 kDa subunit A-like K10739 RFA2; replication factor A2
E 131328415 replication protein A 32 kDa subunit A-like K10739 RFA2; replication factor A2
E 131318899 replication protein A 14 kDa subunit B-like K10740 RPA3; replication factor A3
D RFC (replication factor C)
E 131312465 replication factor C subunit 1 K10754 RFC1; replication factor C subunit 1
E 131333906 replication factor C subunit 2 K10755 RFC2_4; replication factor C subunit 2/4
E 131330067 replication factor C subunit 2 isoform X1 K10755 RFC2_4; replication factor C subunit 2/4
E 131319062 replication factor C subunit 3 K10756 RFC3_5; replication factor C subunit 3/5
E 131307296 replication factor C subunit 3 K10756 RFC3_5; replication factor C subunit 3/5
D Other MMR factors
E 131320495 proliferating cell nuclear antigen-like K04802 PCNA; proliferating cell nuclear antigen
E 131307143 uncharacterized protein LOC131307143 K04802 PCNA; proliferating cell nuclear antigen
E 131328781 proliferating cell nuclear antigen-like K04802 PCNA; proliferating cell nuclear antigen
E 131329617 proliferating cell nuclear antigen-like isoform X1 K04802 PCNA; proliferating cell nuclear antigen
E 131316943 proliferating cell nuclear antigen isoform X1 K04802 PCNA; proliferating cell nuclear antigen
E 131316956 proliferating cell nuclear antigen-like K04802 PCNA; proliferating cell nuclear antigen
E 131310899 exonuclease 1 K10746 EXO1; exonuclease 1 [EC:3.1.-.-]
E 131312367 exonuclease 1 K10746 EXO1; exonuclease 1 [EC:3.1.-.-]
E 131314968 DNA ligase 1 K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
E 131299094 uncharacterized protein LOC131299094 K24755 WDR76; WD repeat-containing protein 76
E 131299102 uncharacterized protein LOC131299102 isoform X1 K24755 WDR76; WD repeat-containing protein 76
E 131299112 uncharacterized protein LOC131299112 K24755 WDR76; WD repeat-containing protein 76
B DSBR (double strand breaks repair)
C HR (homologous recombination)
D MRN(MRX) complex
E 131323301 double-strand break repair protein MRE11 K10865 MRE11; double-strand break repair protein MRE11
E 131316113 DNA repair protein RAD50 K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
E 131302720 nibrin homolog isoform X1 K10867 NBN; nibrin
D BRCA1-core complex
E 131321041 BRCA1-associated RING domain protein 1-like K10683 BARD1; BRCA1-associated RING domain protein 1
E 131312914 BRCA1-associated RING domain protein 1-like isoform X1 K10683 BARD1; BRCA1-associated RING domain protein 1
E 131313255 protein BREAST CANCER SUSCEPTIBILITY 1 homolog isoform X1 K10683 BARD1; BRCA1-associated RING domain protein 1
D BRCA1-A complex
E 131306738 uncharacterized protein LOC131306738 K20776 BABAM; BRISC and BRCA1-A complex member 1
E 131329824 uncharacterized protein LOC131329824 K12173 BRE; BRCA1-A complex subunit BRE
E 131309767 uncharacterized protein LOC131309767 K11864 BRCC3; BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
D BRCA1-B complex
E 131330817 uncharacterized protein LOC131330817 K15362 BRIP1; fanconi anemia group J protein [EC:5.6.2.3]
E 131304583 BRCT domain-containing protein At4g02110 K10728 TOPBP1; topoisomerase (DNA) II binding protein 1
E 131307311 uncharacterized protein LOC131307311 K10728 TOPBP1; topoisomerase (DNA) II binding protein 1
D BRCA1-C complex
E 131323301 double-strand break repair protein MRE11 K10865 MRE11; double-strand break repair protein MRE11
E 131316113 DNA repair protein RAD50 K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
E 131302720 nibrin homolog isoform X1 K10867 NBN; nibrin
D BRCA complex
E 131326098 protein BREAST CANCER SUSCEPTIBILITY 2 homolog A-like K08775 BRCA2; breast cancer 2 susceptibility protein
E 131326873 DNA repair protein RAD51 homolog K04482 RAD51; DNA repair protein RAD51
D RecA family proteins
E 131326873 DNA repair protein RAD51 homolog K04482 RAD51; DNA repair protein RAD51
E 131319278 DNA repair protein RAD51 homolog 2 isoform X1 K10869 RAD51L1; RAD51-like protein 1
E 131333066 DNA repair protein RAD51 homolog 3 K10870 RAD51L2; RAD51-like protein 2
E 131321838 DNA repair protein RAD51 homolog 4-like K10871 RAD51L3; RAD51-like protein 3
E 131299123 DNA repair protein XRCC2 homolog isoform X1 K10879 XRCC2; DNA-repair protein XRCC2
E 131320894 DNA repair protein XRCC3 homolog K10880 XRCC3; DNA-repair protein XRCC3
D Rad52 family proteins
E 131311467 DNA repair RAD52-like protein 1, mitochondrial K26556 RAD52-1; DNA repair RAD52-like protein 1, mitochondrial
E 131311339 DNA repair RAD52-like protein 2, chloroplastic K26558 RAD52-2; DNA repair RAD52-like protein 2, chloroplastic
D Rad54 family proteins
E 131301673 SNF2 domain-containing protein CLASSY 2-like K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E 131320605 SNF2 domain-containing protein CLASSY 1-like K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E 131307946 protein CHROMATIN REMODELING 35 isoform X1 K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E 131325171 protein CHROMATIN REMODELING 35 isoform X1 K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E 131326959 protein CHROMATIN REMODELING 25 isoform X1 K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E 131332110 SNF2 domain-containing protein CLASSY 4-like K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
D RecQ family DNA helicases
E 131307509 ATP-dependent DNA helicase Q-like 1 K10899 RECQL; ATP-dependent DNA helicase Q1 [EC:5.6.2.4]
E 131332255 ATP-dependent DNA helicase Q-like SIM isoform X1 K10900 WRN; werner syndrome ATP-dependent helicase [EC:5.6.2.4]
E 131320024 ATP-dependent DNA helicase Q-like 3 K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 131308772 ATP-dependent DNA helicase Q-like 4A K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 131309970 ATP-dependent DNA helicase Q-like 5 K10730 RECQL4; ATP-dependent DNA helicase Q4 [EC:5.6.2.4]
D Bloom's syndrome complex (BTR)
E 131320024 ATP-dependent DNA helicase Q-like 3 K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 131308772 ATP-dependent DNA helicase Q-like 4A K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 131303407 DNA topoisomerase 3-alpha isoform X1 K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E 131299487 DNA topoisomerase 3-beta isoform X1 K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E 131335198 recQ-mediated genome instability protein 1 isoform X1 K10990 RMI1; RecQ-mediated genome instability protein 1
E 131313520 uncharacterized protein LOC131313520 K15365 RMI2; RecQ-mediated genome instability protein 2
D RPA (replication factor A)
E 131306640 replication protein A 70 kDa DNA-binding subunit A K07466 RFA1; replication factor A1
E 131325354 replication protein A 70 kDa DNA-binding subunit A K07466 RFA1; replication factor A1
E 131299170 replication protein A 70 kDa DNA-binding subunit B K07466 RFA1; replication factor A1
E 131333843 replication protein A 32 kDa subunit A-like K10739 RFA2; replication factor A2
E 131320899 replication protein A 32 kDa subunit B isoform X1 K10739 RFA2; replication factor A2
E 131323753 replication protein A 32 kDa subunit A-like K10739 RFA2; replication factor A2
E 131323936 replication protein A 32 kDa subunit A-like K10739 RFA2; replication factor A2
E 131328415 replication protein A 32 kDa subunit A-like K10739 RFA2; replication factor A2
E 131318899 replication protein A 14 kDa subunit B-like K10740 RPA3; replication factor A3
D Protein phosphatase 4
E 131329603 serine/threonine-protein phosphatase PP-X isozyme 2 K15423 PPP4C; serine/threonine-protein phosphatase 4 catalytic subunit [EC:3.1.3.16]
E 131315141 uncharacterized protein LOC131315141 K15425 PPP4R2; serine/threonine-protein phosphatase 4 regulatory subunit 2
E 131324609 uncharacterized protein LOC131324609 isoform X1 K17491 SMEK; protein phosphatase 4 regulatory subunit 3
D AP-5 complex
E 131301284 uncharacterized protein LOC131301284 K19022 AP5B1; AP-5 complex subunit beta-1
E 131323548 AP-5 complex subunit mu K19023 AP5M1; AP-5 complex subunit mu-1
E 131330445 uncharacterized protein LOC131330445 K19025 AP5Z1; AP-5 complex subunit zeta-1
D SMC5-SMC6 complex
E 131317708 structural maintenance of chromosomes protein 5 K22803 SMC5; structural maintenance of chromosomes protein 5
E 131319201 structural maintenance of chromosomes protein 6B K22804 SMC6; structural maintenance of chromosomes protein 6
E 131314438 uncharacterized protein LOC131314438 K22817 NSMCE1; non-structural maintenance of chromosomes element 1 [EC:2.3.2.27]
E 131331570 E3 SUMO-protein ligase MMS21 isoform X1 K22756 NSMCE2; E3 SUMO-protein ligase NSE2 [EC:2.3.2.-]
E 131320744 non-structural maintenance of chromosomes element 4 homolog A-like K22825 NSMCE4; non-structural maintenance of chromosomes element 4
E 131325967 non-structural maintenance of chromosomes element 4 homolog A-like K22825 NSMCE4; non-structural maintenance of chromosomes element 4
D Other HR factors
E 131303256 uncharacterized protein LOC131303256 isoform X1 K10882 EME1; crossover junction endonuclease EME1 [EC:3.1.22.-]
E 131334724 crossover junction endonuclease MUS81 isoform X1 K08991 MUS81; crossover junction endonuclease MUS81 [EC:3.1.22.-]
E 131311768 protein DELETION OF SUV3 SUPPRESSOR 1(I)-like K10881 SHFM1; 26 proteasome complex subunit DSS1
E 131298122 protein DELETION OF SUV3 SUPPRESSOR 1(I)-like K10881 SHFM1; 26 proteasome complex subunit DSS1
E 131334695 structure-specific endonuclease subunit SLX1-like K15078 SLX1; structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
E 131334696 uncharacterized protein LOC131334696 K15078 SLX1; structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
E 131334702 uncharacterized protein LOC131334702 K15078 SLX1; structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
E 131307890 uncharacterized protein LOC131307890 K15078 SLX1; structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
E 131319570 single-strand DNA endonuclease 1 isoform X1 K15338 GEN1; holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
E 131329925 flap endonuclease GEN-like 1 isoform X1 K15338 GEN1; holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
E 131303262 uncharacterized protein LOC131303262 isoform X1 K19026 SPG11; spatacsin
E 131316773 uncharacterized protein LOC131316773 isoform X1 K19027 ZFYVE26; zinc finger FYVE domain-containing protein 26
E 131304386 protein MRG1 isoform X1 K11339 MORF4L1; mortality factor 4-like protein 1
E 131331270 protein MRG1-like isoform X1 K11339 MORF4L1; mortality factor 4-like protein 1
E 131310283 uncharacterized protein LOC131310283 isoform X1 K22544 SAMHD1; deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
E 131298892 uncharacterized protein LOC131298892 K22544 SAMHD1; deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
E 131304239 ATPase family AAA domain-containing protein FIGL1 K22766 FIGNL1; fidgetin-like protein 1 [EC:5.6.2.-]
E 131307659 uncharacterized protein LOC131307659 K25770 ZSWIM7; zinc finger SWIM domain-containing protein 7
E 131336170 uncharacterized protein LOC131336170 K27803 HROB; homologous recombination OB-fold protein
E 131326516 probable DNA helicase MCM8 K10737 MCM8; DNA helicase MCM8 [EC:5.6.2.4]
E 131308922 probable DNA helicase MCM9 isoform X1 K10738 MCM9; DNA helicase MCM9 [EC:5.6.2.4]
E 131299467 3'-5' exonuclease K22807 WRNexo; werner syndrome-like exonuclease [EC:3.1.11.-]
E 131335569 DNA-dependent metalloprotease WSS1-like isoform X1 K22685 WSS1; DNA-dependent metalloprotease WSS1 [EC:3.4.24.-]
E 131322353 uncharacterized protein LOC131322353 K22685 WSS1; DNA-dependent metalloprotease WSS1 [EC:3.4.24.-]
E 131311394 single-stranded DNA-binding protein WHY1, chloroplastic K26559 WHY1; single-stranded DNA-binding protein WHY1
E 131316416 single-stranded DNA-binding protein WHY2, mitochondrial K26561 WHY2; single-stranded DNA-binding protein WHY2
C NHEJ (non-homologous end-joining)
D DNA-PK complex
E 131333459 ATP-dependent DNA helicase 2 subunit KU70 K10884 XRCC6; ATP-dependent DNA helicase 2 subunit 1
E 131333637 ATP-dependent DNA helicase 2 subunit KU80 K10885 XRCC5; ATP-dependent DNA helicase 2 subunit 2
D MRX complex
E 131323301 double-strand break repair protein MRE11 K10865 MRE11; double-strand break repair protein MRE11
E 131316113 DNA repair protein RAD50 K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
D DNA Ligase 4 complex
E 131320923 DNA ligase 4-like K10777 LIG4; DNA ligase 4 [EC:6.5.1.1]
E 131315263 DNA repair protein XRCC4 K10886 XRCC4; DNA-repair protein XRCC4
D X-family DNA polymerases
E 131310106 DNA polymerase lambda isoform X1 K03512 POLL; DNA polymerase lambda [EC:2.7.7.7 4.2.99.-]
D Other NHEJ factors
E 131326051 transcription factor bHLH140 isoform X1 K10863 APTX; aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
E 131310819 uncharacterized protein LOC131310819 K19619 TDP2; tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-]
E 131319808 structural maintenance of chromosomes flexible hinge domain-containing protein GMI1 isoform X1 K23113 SMCHD1; structural maintenance of chromosomes flexible hinge domain-containing protein 1
C FA (Fanconi anemia) pathway
D FA core complex
E 131307412 DEAD-box ATP-dependent RNA helicase FANCM isoform X1 K10896 FANCM; fanconi anemia group M protein
D FA core complex binding factors
E 131335248 protein MHF1 homolog K11511 APITD1; centromere protein S
E 131309648 protein MHF2 homolog K15360 STRA13; centromere protein X
E 131310713 protein MHF2 homolog isoform X1 K15360 STRA13; centromere protein X
D Bloom's syndrome complex (BTR)
E 131320024 ATP-dependent DNA helicase Q-like 3 K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 131308772 ATP-dependent DNA helicase Q-like 4A K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 131303407 DNA topoisomerase 3-alpha isoform X1 K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E 131299487 DNA topoisomerase 3-beta isoform X1 K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E 131335198 recQ-mediated genome instability protein 1 isoform X1 K10990 RMI1; RecQ-mediated genome instability protein 1
E 131313520 uncharacterized protein LOC131313520 K15365 RMI2; RecQ-mediated genome instability protein 2
D FANCD2-I complex
D Downstream FA components
E 131326098 protein BREAST CANCER SUSCEPTIBILITY 2 homolog A-like K08775 BRCA2; breast cancer 2 susceptibility protein
E 131330817 uncharacterized protein LOC131330817 K15362 BRIP1; fanconi anemia group J protein [EC:5.6.2.3]
D Other FA pathway factors
E 131316260 fanconi-associated nuclease 1 homolog isoform X1 K15363 FAN1; fanconi-associated nuclease 1 [EC:3.1.21.- 3.1.4.1]
E 131326873 DNA repair protein RAD51 homolog K04482 RAD51; DNA repair protein RAD51
E 131333066 DNA repair protein RAD51 homolog 3 K10870 RAD51L2; RAD51-like protein 2
E 131336430 uncharacterized protein LOC131336430 isoform X1 K11137 TELO2; telomere length regulation protein
E 131325903 uncharacterized protein LOC131325903 K15361 WDR48; WD repeat-containing protein 48
C Other DSBR factors
D Protein phosphatase 6
E 131335980 phytochrome-associated serine/threonine-protein phosphatase isoform X1 K15498 PPP6C; serine/threonine-protein phosphatase 6 catalytic subunit [EC:3.1.3.16]
E 131312119 uncharacterized protein LOC131312119 isoform X1 K15501 PPP6R3; serine/threonine-protein phosphatase 6 regulatory subunit 3
E 131314904 uncharacterized protein LOC131314904 K15501 PPP6R3; serine/threonine-protein phosphatase 6 regulatory subunit 3
D Ubiquitin ligases
D Others
E 131311851 uncharacterized protein LOC131311851 isoform X1 K23314 WRAP53; telomerase Cajal body protein 1
E 131313220 uncharacterized protein LOC131313220 K24752 WDR70; WD repeat-containing protein 70
E 131299094 uncharacterized protein LOC131299094 K24755 WDR76; WD repeat-containing protein 76
E 131299102 uncharacterized protein LOC131299102 isoform X1 K24755 WDR76; WD repeat-containing protein 76
E 131299112 uncharacterized protein LOC131299112 K24755 WDR76; WD repeat-containing protein 76
B TLS (translesion DNA synthesis) factors
C Y-family DNA polymerases
D 131313325 DNA polymerase eta isoform X1 K03509 POLH; DNA polymerase eta [EC:2.7.7.7]
D 131327972 DNA polymerase kappa K03511 POLK; DNA polymerase kappa [EC:2.7.7.7]
D 131327104 DNA repair protein REV1 isoform X1 K03515 REV1; DNA repair protein REV1 [EC:2.7.7.-]
C B-family DNA polymerases
D 131310416 DNA polymerase zeta catalytic subunit isoform X1 K02350 REV3L; DNA polymerase zeta [EC:2.7.7.7]
C A-family DNA polymerase
C Rad6 epistasis group
D 131318467 ubiquitin-conjugating enzyme E2 2 K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
D 131310409 ubiquitin-conjugating enzyme E2 2 K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
D 131311395 ubiquitin-conjugating enzyme E2 2-like K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
D 131324137 DNA repair protein RAD5B K15505 RAD5; DNA repair protein RAD5 [EC:5.6.2.-]
D 131327076 DNA repair protein RAD5A K15505 RAD5; DNA repair protein RAD5 [EC:5.6.2.-]
D 131322224 putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 1 K15711 SMARCA3; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
D 131301843 ubiquitin-conjugating enzyme E2 variant 1A-like isoform X1 K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant
D 131320964 ubiquitin-conjugating enzyme E2 variant 1D K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant
D 131323393 ubiquitin-conjugating enzyme E2 36 K10580 UBE2N; ubiquitin-conjugating enzyme E2 N [EC:2.3.2.23]
D 131330089 ubiquitin-conjugating enzyme E2 35-like K10580 UBE2N; ubiquitin-conjugating enzyme E2 N [EC:2.3.2.23]
D 131331534 ubiquitin-conjugating enzyme E2 36 K10580 UBE2N; ubiquitin-conjugating enzyme E2 N [EC:2.3.2.23]
C Other TLS factors
D 131320495 proliferating cell nuclear antigen-like K04802 PCNA; proliferating cell nuclear antigen
D 131307143 uncharacterized protein LOC131307143 K04802 PCNA; proliferating cell nuclear antigen
D 131328781 proliferating cell nuclear antigen-like K04802 PCNA; proliferating cell nuclear antigen
D 131329617 proliferating cell nuclear antigen-like isoform X1 K04802 PCNA; proliferating cell nuclear antigen
D 131316943 proliferating cell nuclear antigen isoform X1 K04802 PCNA; proliferating cell nuclear antigen
D 131316956 proliferating cell nuclear antigen-like K04802 PCNA; proliferating cell nuclear antigen
B Check point factors
C Rad9-Hus1-Rad1 complex
D 131327131 uncharacterized protein LOC131327131 isoform X1 K10994 RAD9A; cell cycle checkpoint control protein RAD9A [EC:3.1.11.2]
D 131335390 uncharacterized protein LOC131335390 K10903 HUS1; HUS1 checkpoint protein
D 131307716 uncharacterized protein LOC131307716 isoform X1 K02830 HRAD1; cell cycle checkpoint protein [EC:3.1.11.2]
C HRAD17(Rad24)-RFC complex
D 131302564 cell cycle checkpoint protein RAD17 isoform X1 K06662 HRAD17; cell cycle checkpoint protein
D 131333906 replication factor C subunit 2 K10755 RFC2_4; replication factor C subunit 2/4
D 131330067 replication factor C subunit 2 isoform X1 K10755 RFC2_4; replication factor C subunit 2/4
D 131319062 replication factor C subunit 3 K10756 RFC3_5; replication factor C subunit 3/5
D 131307296 replication factor C subunit 3 K10756 RFC3_5; replication factor C subunit 3/5
C Rad17-Mec3-Ddc1 complex
D 131307716 uncharacterized protein LOC131307716 isoform X1 K02830 HRAD1; cell cycle checkpoint protein [EC:3.1.11.2]
C FPC (fork protection complex)
D 131319704 uncharacterized protein LOC131319704 K10997 TIMELESS; replication fork protection complex subunit TIMELESS/Tof1/Swi1
D 131300821 uncharacterized protein LOC131300821 isoform X1 K10998 TIPIN; replication fork protection complex subunit TIPIN/Csm3/Swi3
C Triple T complex
D 131336430 uncharacterized protein LOC131336430 isoform X1 K11137 TELO2; telomere length regulation protein
D 131329059 uncharacterized protein LOC131329059 isoform X1 K20403 TTI1; TELO2-interacting protein 1
D 131300162 uncharacterized protein At2g39910 K23115 TTI2; TELO2-interacting protein 2
C BAG6-UBL4A-GET4 complex
D 131318736 protein GET4 K23387 GET4; golgi to ER traffic protein 4
C Other check point factors
D 131308664 serine/threonine-protein kinase ATR isoform X1 K06640 ATR; serine/threonine-protein kinase ATR [EC:2.7.11.1]
D 131335836 serine/threonine-protein kinase ATM isoform X1 K04728 ATM; serine-protein kinase ATM [EC:2.7.11.1]
D 131302392 14-3-3-like protein D K06630 YWHAE; 14-3-3 protein epsilon
D 131334093 14-3-3-like protein C K06630 YWHAE; 14-3-3 protein epsilon
D 131334094 14-3-3-like protein C K06630 YWHAE; 14-3-3 protein epsilon
D 131335930 14-3-3 protein 10-like K06630 YWHAE; 14-3-3 protein epsilon
D 131308921 14-3-3 protein 6-like K06630 YWHAE; 14-3-3 protein epsilon
D 131309955 14-3-3-like protein GF14 iota K06630 YWHAE; 14-3-3 protein epsilon
D 131310569 14-3-3-like protein GF14 iota isoform X1 K06630 YWHAE; 14-3-3 protein epsilon
D 131311436 14-3-3-like protein GF14 iota K06630 YWHAE; 14-3-3 protein epsilon
D 131330075 14-3-3-like protein B isoform X1 K06630 YWHAE; 14-3-3 protein epsilon
D 131299004 14-3-3-like protein K06630 YWHAE; 14-3-3 protein epsilon
D 131331392 14-3-3 protein 10 K06630 YWHAE; 14-3-3 protein epsilon
D 131331532 14-3-3-like protein D K06630 YWHAE; 14-3-3 protein epsilon
D 131332328 14-3-3-like protein D K06630 YWHAE; 14-3-3 protein epsilon
D 131336187 wee1-like protein kinase isoform X1 K06632 WEE1; wee1-like protein kinase [EC:2.7.11.1]
D 131316202 uncharacterized protein LOC131316202 K20780 MDC1; mediator of DNA damage checkpoint protein 1
D 131334237 serine/threonine-protein kinase Nek2 K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 131320807 serine/threonine-protein kinase Nek6-like isoform X1 K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 131324653 serine/threonine-protein kinase Nek5 K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 131325269 serine/threonine-protein kinase Nek3-like K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 131314615 serine/threonine-protein kinase Nek6-like K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 131318529 uncharacterized protein LOC131318529 K22422 DONSON; protein downstream neighbor of Son
D 131312621 protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1-like isoform X1 K12196 VPS4; vacuolar protein-sorting-associated protein 4
D 131329543 protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1 isoform X1 K12196 VPS4; vacuolar protein-sorting-associated protein 4
D 131334567 uncharacterized protein LOC131334567 K25059 SDE2; replication stress response regulator SDE2
D 131330956 protein DECREASED SIZE EXCLUSION LIMIT 1 K24770 DSE1; protein decreased size exclusion limit 1
B Other factors with a suspected DNA repair function
C DNA polymerases
D 131315552 helicase and polymerase-containing protein TEBICHI isoform X1 K02349 POLQ; DNA polymerase theta [EC:2.7.7.7]
D 131307230 uncharacterized protein LOC131307230 K02331 POL5; DNA polymerase phi [EC:2.7.7.7]
D 131319666 uncharacterized protein LOC131319666 K22761 PRIMPOL; DNA-directed primase/polymerase protein [EC:2.7.7.102 2.7.7.7]
C Nucleases
D 131304357 uncharacterized protein LOC131304357 isoform X1 K15340 DCLRE1A; DNA cross-link repair 1A protein
D 131298418 DNA cross-link repair protein SNM1 K15340 DCLRE1A; DNA cross-link repair 1A protein
D 131332223 uncharacterized protein LOC131332223 K15340 DCLRE1A; DNA cross-link repair 1A protein
D 131323105 uncharacterized protein LOC131323105 isoform X1 K15341 DCLRE1B; DNA cross-link repair 1B protein [EC:3.1.-.-]
D 131330154 exonuclease V, chloroplastic-like isoform X1 K17815 EXO5; exonuclease V [EC:3.1.-.-]
D 131316959 exonuclease V, chloroplastic-like K17815 EXO5; exonuclease V [EC:3.1.-.-]
D 131332345 uncharacterized protein LOC131332345 isoform X1 K21813 ENDOV; endonuclease V [EC:3.1.26.-]
D 131325252 endonuclease 4-like K05986 NUCS; nuclease S1 [EC:3.1.30.1]
D 131326605 endonuclease 1 K05986 NUCS; nuclease S1 [EC:3.1.30.1]
D 131326606 endonuclease 4-like isoform X1 K05986 NUCS; nuclease S1 [EC:3.1.30.1]
D 131300771 endonuclease 2-like K05986 NUCS; nuclease S1 [EC:3.1.30.1]
C Helicases
D 131328796 switch 2 K20098 ERCC6L2; DNA excision repair protein ERCC-6-like 2 [EC:5.6.2.-]
C PSO4 complex
D 131316691 pre-mRNA-processing factor 19-like K10599 PRPF19; pre-mRNA-processing factor 19 [EC:2.3.2.27]
D 131325880 cell division cycle 5-like protein K12860 CDC5L; pre-mRNA-splicing factor CDC5/CEF1
D 131310597 pre-mRNA-splicing factor SPF27 homolog K12861 BCAS2; pre-mRNA-splicing factor SPF27
D 131324519 protein pleiotropic regulatory locus 1 K12862 PLRG1; pleiotropic regulator 1
D 131329904 protein pleiotropic regulatory locus 1-like isoform X1 K12862 PLRG1; pleiotropic regulator 1
C Modulation of nucleotide pools
D 131301439 geranyl diphosphate phosphohydrolase isoform X1 K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D 131333035 deoxyuridine 5'-triphosphate nucleotidohydrolase-like K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D 131331051 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D 131303241 ribonucleoside-diphosphate reductase large subunit K10807 RRM1; ribonucleoside-diphosphate reductase subunit M1 [EC:1.17.4.1]
D 131321674 ribonucleoside-diphosphate reductase small chain A K10808 RRM2; ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1]
D 131311136 ribonucleoside-diphosphate reductase small chain K10808 RRM2; ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1]
#
AProkaryotic type
B SSBR (single strand breaks repair)
C Direct repair
D 131334878 deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
C BER (base exicision repair)
D DNA glycosylases
E 131326088 uracil-DNA glycosylase, mitochondrial K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
E 131331028 uncharacterized protein LOC131331028 K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
E 131324308 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
E 131313263 adenine DNA glycosylase isoform X1 K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
E 131303453 uncharacterized protein LOC131303453 isoform X1 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 131335335 uncharacterized protein LOC131335335 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 131310522 uncharacterized protein LOC131310522 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 131312080 uncharacterized protein LOC131312080 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 131313690 uncharacterized protein LOC131313690 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 131332509 uncharacterized protein LOC131332509 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 131312118 formamidopyrimidine-DNA glycosylase isoform X1 K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
E 131311546 putative DNA glycosylase At3g47830 K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
E 131316523 endonuclease III homolog 1, chloroplastic-like isoform X1 K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D AP endonucleases
E 131318597 DNA-(apurinic or apyrimidinic site) endonuclease, chloroplastic K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D RecJ
D DNA ligase
D DNA polymerase I
E 131321710 DNA polymerase I A, chloroplastic/mitochondrial K02335 polA; DNA polymerase I [EC:2.7.7.7]
E 131330465 DNA polymerase I A, chloroplastic/mitochondrial-like K02335 polA; DNA polymerase I [EC:2.7.7.7]
C NER (nucleotide excision repair)
D GGR (global genome repair) factors
E 131321710 DNA polymerase I A, chloroplastic/mitochondrial K02335 polA; DNA polymerase I [EC:2.7.7.7]
E 131330465 DNA polymerase I A, chloroplastic/mitochondrial-like K02335 polA; DNA polymerase I [EC:2.7.7.7]
D TCR (transcription coupled repair) factors
E DNA-directed RNA polymerase complex (RNAP)
E TRCF (transcription-repair coupling factor)
C MMR (mismatch excision repair)
D Mismatch and loop recognition factors
E 131312810 uncharacterized protein LOC131312810 isoform X1 K07456 mutS2; DNA mismatch repair protein MutS2
D Molecular matchmaker
D Strand discrimination factor
D DNA exonucleases
D DNA polymerase III holoenzyme
D DNA ligase
D Other MMR factors
E 131297938 single-stranded DNA-binding protein, mitochondrial K03111 ssb; single-strand DNA-binding protein
B DSBR (double strand breaks repair)
C HR (homologous recombination)
D RecBC pathway proteins
E 131320061 DNA repair protein recA homolog 3, mitochondrial-like isoform X1 K03553 recA; recombination protein RecA
E 131325420 DNA repair protein recA homolog 3, mitochondrial-like K03553 recA; recombination protein RecA
E 131329717 DNA repair protein recA homolog 1, chloroplastic K03553 recA; recombination protein RecA
D RecFOR pathway proteins
E 131320061 DNA repair protein recA homolog 3, mitochondrial-like isoform X1 K03553 recA; recombination protein RecA
E 131325420 DNA repair protein recA homolog 3, mitochondrial-like K03553 recA; recombination protein RecA
E 131329717 DNA repair protein recA homolog 1, chloroplastic K03553 recA; recombination protein RecA
E 131299238 uncharacterized protein LOC131299238 K04485 radA; DNA repair protein RadA/Sms
E 131301729 ATP-dependent DNA helicase homolog RECG, chloroplastic isoform X1 K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D AddAB pathway proteins
D Other HR factor
D Archaeal homologous recombinant proteins
C NHEJ (non-homologous end-joining)
D Two-component NHEJ DNA repair complex
D SHIIR (short-homology-independent illegitimate recombination)
E Facilitator
F 131334817 DNA gyrase subunit A, chloroplastic/mitochondrial K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
F 131319002 DNA gyrase subunit B, chloroplastic/mitochondrial-like K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
E Supressor
D SHDIR (short-homology-dependent illegitimate recombination)
E RecET pathway
E Facilitator
E Supressor
F 131313788 uncharacterized protein LOC131313788 K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
B TLS (translesion DNA synthesis) factors
C Y-family DNA polymerases
C Other SOS response factors
D 131320061 DNA repair protein recA homolog 3, mitochondrial-like isoform X1 K03553 recA; recombination protein RecA
D 131325420 DNA repair protein recA homolog 3, mitochondrial-like K03553 recA; recombination protein RecA
D 131329717 DNA repair protein recA homolog 1, chloroplastic K03553 recA; recombination protein RecA
D 131297938 single-stranded DNA-binding protein, mitochondrial K03111 ssb; single-strand DNA-binding protein
B Other factors with a suspected DNA repair function
C DNA polymerase
C DNA helicases
C Modulation of nucleotide pools
D 131301439 geranyl diphosphate phosphohydrolase isoform X1 K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D 131333035 deoxyuridine 5'-triphosphate nucleotidohydrolase-like K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D 131331051 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
C Others
!
#
#[ BRITE | KEGG2 | KEGG ]
#Last updated: August 19, 2024