+D GENES KO #

  KEGG Orthology (KO) - Sphingomonas aerolata

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:saer00010] D NEF64_15165 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D NEF64_16655 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D NEF64_06270 class I fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D NEF64_12100 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D NEF64_06240 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D NEF64_06250 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D NEF64_17595 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D NEF64_13305 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D NEF64_17805 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D NEF64_05075 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D NEF64_11970 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D NEF64_11965 pyruvate dehydrogenase complex E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D NEF64_05350 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D NEF64_05365 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D NEF64_11295 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D NEF64_15630 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D NEF64_06150 Zn-dependent alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D NEF64_14385 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D NEF64_05040 NAD(P)-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D NEF64_05580 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D NEF64_11550 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D NEF64_12300 galactose mutarotase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D NEF64_03990 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D NEF64_10100 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] C 00020 Citrate cycle (TCA cycle) [PATH:saer00020] D NEF64_06420 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D NEF64_16065 acnA; aconitate hydratase AcnA K01681 ACO; aconitate hydratase [EC:4.2.1.3] D NEF64_12590 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D NEF64_15640 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D NEF64_15635 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D NEF64_05365 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D NEF64_11295 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D NEF64_15630 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D NEF64_15645 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D NEF64_01600 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D NEF64_15695 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D NEF64_15670 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D NEF64_15705 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D NEF64_15700 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D NEF64_15130 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D NEF64_18085 fumC; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D NEF64_15655 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D NEF64_18420 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D NEF64_04060 mqo; malate dehydrogenase (quinone) K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4] D NEF64_10100 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D NEF64_11970 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D NEF64_11965 pyruvate dehydrogenase complex E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D NEF64_05350 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] C 00030 Pentose phosphate pathway [PATH:saer00030] D NEF64_15165 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D NEF64_05295 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D NEF64_12665 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D NEF64_12670 pgl; 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31] D NEF64_16025 gnd; decarboxylating 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D NEF64_01130 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D NEF64_16035 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D NEF64_16030 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D NEF64_16040 rpiA; ribose-5-phosphate isomerase RpiA K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D NEF64_02410 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D NEF64_07225 phosphoketolase family protein K01621 xfp; xylulose-5-phosphate/fructose-6-phosphate phosphoketolase [EC:4.1.2.9 4.1.2.22] D NEF64_03990 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D NEF64_01590 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D NEF64_12675 edd; phosphogluconate dehydratase K01690 edd; phosphogluconate dehydratase [EC:4.2.1.12] D NEF64_12685 eda; bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D NEF64_08815 glucose 1-dehydrogenase K00034 gdh; glucose 1-dehydrogenase [EC:1.1.1.47] D NEF64_10830 glucose 1-dehydrogenase K00034 gdh; glucose 1-dehydrogenase [EC:1.1.1.47] D NEF64_08285 membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family K00117 gcd; quinoprotein glucose dehydrogenase [EC:1.1.5.2] D NEF64_11070 gluconokinase K00851 idnK; gluconokinase [EC:2.7.1.12] D NEF64_08670 sugar kinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45] D NEF64_12960 sugar kinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45] D NEF64_08345 glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D NEF64_06270 class I fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D NEF64_16655 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] C 00040 Pentose and glucuronate interconversions [PATH:saer00040] D NEF64_08660 kduI; 5-dehydro-4-deoxy-D-glucuronate isomerase K01815 kduI; 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [EC:5.3.1.17] D NEF64_08665 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD K00065 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase [EC:1.1.1.127] D NEF64_08655 uxaC; glucuronate isomerase K01812 uxaC; glucuronate isomerase [EC:5.3.1.12] D NEF64_12970 uxaC; glucuronate isomerase K01812 uxaC; glucuronate isomerase [EC:5.3.1.12] D NEF64_08645 altronate dehydratase family protein K01685 uxaA; altronate hydrolase [EC:4.2.1.7] D NEF64_12975 uxuA; mannonate dehydratase K01686 uxuA; mannonate dehydratase [EC:4.2.1.8] D NEF64_10910 D-galactonate dehydratase family protein K08323 rspA; mannonate dehydratase [EC:4.2.1.8] D NEF64_08640 mannitol dehydrogenase family protein K00040 uxuB; fructuronate reductase [EC:1.1.1.57] D NEF64_12965 mannitol dehydrogenase family protein K00040 uxuB; fructuronate reductase [EC:1.1.1.57] D NEF64_03645 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D NEF64_07315 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D NEF64_01130 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D NEF64_01080 xylB; xylulokinase K00854 xylB; xylulokinase [EC:2.7.1.17] D NEF64_01085 xylA; xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5] D NEF64_10880 SDR family oxidoreductase K22185 xylB; D-xylose 1-dehydrogenase [EC:1.1.1.175] D NEF64_10885 SMP-30/gluconolactonase/LRE family protein K14274 xylC; xylono-1,5-lactonase [EC:3.1.1.110] D NEF64_10895 dihydroxy-acid dehydratase family protein K22186 xylD; xylonate dehydratase [EC:4.2.1.82] D NEF64_12305 dihydroxy-acid dehydratase family protein K22186 xylD; xylonate dehydratase [EC:4.2.1.82] D NEF64_12285 aldehyde dehydrogenase (NADP(+)) K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26] C 00051 Fructose and mannose metabolism [PATH:saer00051] D NEF64_04890 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D NEF64_07490 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D NEF64_07865 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D NEF64_08120 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D NEF64_17985 sugar phosphate nucleotidyltransferase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D NEF64_02335 phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D NEF64_09675 SDR family oxidoreductase K18333 E1.1.1.435; L-fucose dehydrogenase [EC:1.1.1.435] D NEF64_09670 amidohydrolase family protein K07046 E3.1.1.120; L-fucono-1,5-lactonase [EC:3.1.1.120] D NEF64_09650 L-fuconate dehydratase K18334 fucD; L-fuconate dehydratase [EC:4.2.1.68] D NEF64_09660 SDR family oxidoreductase K18335 E1.1.1.434; 2-dehydro-3-deoxy-L-fuconate 4-dehydrogenase [EC:1.1.1.434] D NEF64_09655 fumarylacetoacetate hydrolase family protein K18336 lra6; 2,4-didehydro-3-deoxy-L-rhamnonate hydrolase [EC:3.7.1.26] D NEF64_16655 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D NEF64_01085 xylA; xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5] D NEF64_06270 class I fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D NEF64_12100 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D NEF64_02410 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D NEF64_10075 PTS sugar transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D NEF64_05635 HAD-IA family hydrolase K19270 hxpA; mannitol-1-/sugar-/sorbitol-6-phosphatase [EC:3.1.3.22 3.1.3.23 3.1.3.50] C 00052 Galactose metabolism [PATH:saer00052] D NEF64_12300 galactose mutarotase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D NEF64_02495 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D NEF64_07315 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D NEF64_03990 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D NEF64_09315 DUF4982 domain-containing protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D NEF64_11670 DUF4982 domain-containing protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D NEF64_17550 NPCBM/NEW2 domain-containing protein K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] D NEF64_12275 Gfo/Idh/MocA family oxidoreductase K00035 gal; D-galactose 1-dehydrogenase [EC:1.1.1.48] D NEF64_09635 2-dehydro-3-deoxygalactonokinase K00883 dgoK; 2-dehydro-3-deoxygalactonokinase [EC:2.7.1.58] D NEF64_09640 2-dehydro-3-deoxy-6-phosphogalactonate aldolase K01631 dgoA; 2-dehydro-3-deoxyphosphogalactonate aldolase [EC:4.1.2.21] D NEF64_11280 alpha-glucosidase family protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D NEF64_11285 glycoside hydrolase family 97 protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20] C 00053 Ascorbate and aldarate metabolism [PATH:saer00053] D NEF64_03645 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D NEF64_14735 NAD-dependent epimerase/dehydratase family protein K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D NEF64_05580 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D NEF64_12285 aldehyde dehydrogenase (NADP(+)) K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26] D NEF64_08725 kdgD; 5-dehydro-4-deoxyglucarate dehydratase K01707 kdgD; 5-dehydro-4-deoxyglucarate dehydratase [EC:4.2.1.41] C 00500 Starch and sucrose metabolism [PATH:saer00500] D NEF64_11280 alpha-glucosidase family protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D NEF64_11285 glycoside hydrolase family 97 protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D NEF64_07870 alpha-amylase family glycosyl hydrolase K05341 E2.4.1.4; amylosucrase [EC:2.4.1.4] D NEF64_07315 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D NEF64_08065 exo 1,3/1,4-beta-D-glucan glucohydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D NEF64_10915 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D NEF64_11025 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D NEF64_11690 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D NEF64_12355 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D NEF64_16725 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D NEF64_17545 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D NEF64_03695 glycoside hydrolase family 5 protein K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D NEF64_04520 glycoside hydrolase family 9 protein K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D NEF64_04000 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D NEF64_03995 glgA; glycogen synthase GlgA K00703 glgA; starch synthase [EC:2.4.1.21] D NEF64_04005 glgB; 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D NEF64_04010 glycogen/starch/alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D NEF64_10800 malQ; 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25] D NEF64_10810 glgX; glycogen debranching protein GlgX K01214 ISA; isoamylase [EC:3.2.1.68] D NEF64_10795 treY; malto-oligosyltrehalose synthase K06044 treY; (1->4)-alpha-D-glucan 1-alpha-D-glucosylmutase [EC:5.4.99.15] D NEF64_10805 treZ; malto-oligosyltrehalose trehalohydrolase K01236 treZ; maltooligosyltrehalose trehalohydrolase [EC:3.2.1.141] D NEF64_15810 trehalose-6-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347] D NEF64_15800 otsB; trehalose-phosphatase K01087 otsB; trehalose 6-phosphate phosphatase [EC:3.1.3.12] D NEF64_09390 treF; alpha,alpha-trehalase TreF K01194 TREH; alpha,alpha-trehalase [EC:3.2.1.28] D NEF64_03990 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D NEF64_15165 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D NEF64_04890 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D NEF64_07490 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D NEF64_07865 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D NEF64_08120 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:saer00520] D NEF64_14540 glycoside hydrolase family 3 protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D NEF64_11680 family 20 glycosylhydrolase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D NEF64_12885 family 20 glycosylhydrolase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D NEF64_11665 nagE; N-acetylglucosamine-specific PTS transporter subunit IIBC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193] D NEF64_11655 nagA; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25] D NEF64_04890 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D NEF64_07490 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D NEF64_07865 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D NEF64_08120 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D NEF64_04880 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D NEF64_11650 SIS domain-containing protein K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D NEF64_02545 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D NEF64_04875 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D NEF64_12075 anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170] D NEF64_10430 phosphotransferase K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221] D NEF64_10425 nucleotidyltransferase family protein K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99] D NEF64_02850 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D NEF64_14600 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D NEF64_07310 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D NEF64_07305 wecC; UDP-N-acetyl-D-mannosamine dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336] D NEF64_17565 alpha-N-arabinofuranosidase K01209 abfA; alpha-L-arabinofuranosidase [EC:3.2.1.55] D NEF64_05410 cellulase family glycosylhydrolase K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37] D NEF64_09760 glycoside hydrolase family 43 protein K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37] D NEF64_08695 family 43 glycosylhydrolase K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37] D NEF64_03990 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D NEF64_07315 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D NEF64_03645 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D NEF64_02495 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D NEF64_14735 NAD-dependent epimerase/dehydratase family protein K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D NEF64_10075 PTS sugar transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D NEF64_15165 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D NEF64_02335 phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D NEF64_17985 sugar phosphate nucleotidyltransferase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D NEF64_04000 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] C 00620 Pyruvate metabolism [PATH:saer00620] D NEF64_11550 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D NEF64_11970 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D NEF64_11965 pyruvate dehydrogenase complex E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D NEF64_05350 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D NEF64_05365 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D NEF64_11295 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D NEF64_15630 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D NEF64_06150 Zn-dependent alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D NEF64_14385 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D NEF64_05040 NAD(P)-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D NEF64_07230 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D NEF64_17805 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D NEF64_06050 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D NEF64_05610 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D NEF64_05605 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D NEF64_13210 accD; acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D NEF64_05580 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D NEF64_09020 alpha-hydroxy-acid oxidizing protein K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3] D NEF64_09645 lldD; FMN-dependent L-lactate dehydrogenase LldD K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3] D NEF64_11535 poxB; ubiquinone-dependent pyruvate dehydrogenase K00156 poxB; pyruvate dehydrogenase (quinone) [EC:1.2.5.1] D NEF64_17855 alpha-hydroxy-acid oxidizing protein K00467 E1.13.12.4; lactate 2-monooxygenase [EC:1.13.12.4] D NEF64_09045 FAD-binding protein K00102 LDHD; D-lactate dehydrogenase (cytochrome) [EC:1.1.2.4] D NEF64_16565 VOC family protein K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D NEF64_02020 MBL fold metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D NEF64_16300 gloB; hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D NEF64_02660 NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D NEF64_15655 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D NEF64_18420 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D NEF64_04060 mqo; malate dehydrogenase (quinone) K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4] D NEF64_15130 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D NEF64_18085 fumC; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D NEF64_00125 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D NEF64_10100 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D NEF64_05075 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D NEF64_11450 malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9] D NEF64_11185 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NEF64_15390 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NEF64_15415 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NEF64_16265 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NEF64_14350 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:saer00630] D NEF64_11590 isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1] D NEF64_11550 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D NEF64_11450 malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9] D NEF64_15655 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D NEF64_18420 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D NEF64_06420 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D NEF64_16065 acnA; aconitate hydratase AcnA K01681 ACO; aconitate hydratase [EC:4.2.1.3] D NEF64_11185 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NEF64_15390 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NEF64_15415 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NEF64_16265 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NEF64_02900 phbB; acetoacetyl-CoA reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36] D NEF64_03025 mce; methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D NEF64_03050 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3] D NEF64_03005 acyl-CoA carboxylase subunit beta K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15] D NEF64_03035 scpA; methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D NEF64_04590 catalase K03781 katE; catalase [EC:1.11.1.6] D NEF64_11715 catalase K03781 katE; catalase [EC:1.11.1.6] D NEF64_06995 D-glycerate dehydrogenase K00015 gyaR; glyoxylate reductase [EC:1.1.1.26] D NEF64_18055 HAD-IA family hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D NEF64_05590 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D NEF64_02415 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D NEF64_05160 gcvPA; aminomethyl-transferring glycine dehydrogenase subunit GcvPA K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D NEF64_05165 gcvPB; aminomethyl-transferring glycine dehydrogenase subunit GcvPB K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D NEF64_05150 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D NEF64_05365 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D NEF64_11295 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D NEF64_15630 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D NEF64_05155 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein D NEF64_08340 TIM barrel protein K01816 hyi; hydroxypyruvate isomerase [EC:5.3.1.22] D NEF64_01045 TIM barrel protein K01816 hyi; hydroxypyruvate isomerase [EC:5.3.1.22] D NEF64_08375 2-hydroxy-3-oxopropionate reductase K00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60] D NEF64_08345 glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D NEF64_12685 eda; bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] C 00640 Propanoate metabolism [PATH:saer00640] D NEF64_11550 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D NEF64_07230 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D NEF64_16285 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D NEF64_16280 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D NEF64_16275 2-oxo acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D NEF64_05365 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D NEF64_11295 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D NEF64_15630 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D NEF64_04285 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D NEF64_06050 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D NEF64_05610 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D NEF64_05605 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D NEF64_13210 accD; acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D NEF64_03050 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3] D NEF64_03005 acyl-CoA carboxylase subunit beta K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15] D NEF64_03025 mce; methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D NEF64_03035 scpA; methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D NEF64_01600 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D NEF64_15645 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D NEF64_04265 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] C 00650 Butanoate metabolism [PATH:saer00650] D NEF64_11185 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NEF64_15390 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NEF64_15415 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NEF64_16265 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NEF64_03305 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D NEF64_06190 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D NEF64_11320 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D NEF64_04285 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D NEF64_02820 alpha/beta fold hydrolase K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304] D NEF64_11195 phaZ; polyhydroxyalkanoate depolymerase K05973 phaZ; poly(3-hydroxybutyrate) depolymerase [EC:3.1.1.75] D NEF64_02900 phbB; acetoacetyl-CoA reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36] D NEF64_15695 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D NEF64_15670 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D NEF64_15705 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D NEF64_15700 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D NEF64_14795 CoA transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5] D NEF64_14780 3-oxoacid CoA-transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] D NEF64_10335 3-hydroxybutyrate dehydrogenase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30] D NEF64_14330 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D NEF64_14800 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D NEF64_14335 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] C 00660 C5-Branched dibasic acid metabolism [PATH:saer00660] D NEF64_14330 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D NEF64_14800 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D NEF64_14335 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D NEF64_01600 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D NEF64_15645 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D NEF64_09100 MaoC family dehydratase K18290 ich-Y; itaconyl-CoA hydratase [EC:4.2.1.56] D NEF64_04615 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D NEF64_04620 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D NEF64_14835 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism [PATH:saer00562] D NEF64_04110 3'(2'),5'-bisphosphate nucleotidase CysQ K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D NEF64_06295 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D NEF64_05845 phytase K01083 E3.1.3.8; 3-phytase [EC:3.1.3.8] D NEF64_09695 histidine-type phosphatase K01093 appA; 4-phytase / acid phosphatase [EC:3.1.3.26 3.1.3.2] D NEF64_05725 inositol-3-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4] D NEF64_12935 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3] D NEF64_04265 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D NEF64_12100 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:saer00190] D NEF64_06300 NADH-quinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2] D NEF64_06305 NADH-quinone oxidoreductase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2] D NEF64_06310 NADH-quinone oxidoreductase subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2] D NEF64_06315 NADH-quinone oxidoreductase subunit D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2] D NEF64_06320 NAD(P)H-dependent oxidoreductase subunit E K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2] D NEF64_06325 nuoF; NADH-quinone oxidoreductase subunit NuoF K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2] D NEF64_06330 nuoG; NADH-quinone oxidoreductase subunit NuoG K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2] D NEF64_06335 nuoH; NADH-quinone oxidoreductase subunit NuoH K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2] D NEF64_06340 nuoI; NADH-quinone oxidoreductase subunit NuoI K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2] D NEF64_06345 NADH-quinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2] D NEF64_06350 nuoK; NADH-quinone oxidoreductase subunit NuoK K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2] D NEF64_06355 nuoL; NADH-quinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2] D NEF64_06360 NADH-quinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2] D NEF64_06365 nuoN; NADH-quinone oxidoreductase subunit NuoN K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2] D NEF64_15695 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D NEF64_15670 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D NEF64_15705 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D NEF64_15700 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D NEF64_05005 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D NEF64_05010 cytochrome b/b6 K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D NEF64_05015 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D NEF64_03135 heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141] D NEF64_04215 cyoD; cytochrome o ubiquinol oxidase subunit IV K02300 cyoD; cytochrome o ubiquinol oxidase subunit IV D NEF64_08305 cytochrome C oxidase subunit IV family protein K02300 cyoD; cytochrome o ubiquinol oxidase subunit IV D NEF64_03120 cytochrome c oxidase subunit 3 K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9] D NEF64_03145 ctaD; cytochrome c oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9] D NEF64_10775 ctaD; cytochrome c oxidase subunit I K15408 coxAC; cytochrome c oxidase subunit I+III [EC:7.1.1.9] D NEF64_10770 c-type cytochrome K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9] D NEF64_03125 cytochrome c oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11 D NEF64_11830 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9] D NEF64_04210 cyoC; cytochrome o ubiquinol oxidase subunit III K02299 cyoC; cytochrome o ubiquinol oxidase subunit III D NEF64_08300 cytochrome c oxidase subunit 3 K02299 cyoC; cytochrome o ubiquinol oxidase subunit III D NEF64_04205 cyoB; cytochrome o ubiquinol oxidase subunit I K02298 cyoB; cytochrome o ubiquinol oxidase subunit I [EC:7.1.1.3] D NEF64_08295 cbb3-type cytochrome c oxidase subunit I K02298 cyoB; cytochrome o ubiquinol oxidase subunit I [EC:7.1.1.3] D NEF64_04200 COX aromatic rich motif-containing protein K02297 cyoA; cytochrome o ubiquinol oxidase subunit II [EC:7.1.1.3] D NEF64_08290 cytochrome ubiquinol oxidase subunit II K02297 cyoA; cytochrome o ubiquinol oxidase subunit II [EC:7.1.1.3] D NEF64_12245 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D NEF64_12235 cydX; cytochrome bd-I oxidase subunit CydX K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7] D NEF64_01040 c-type cytochrome K08738 CYC; cytochrome c D NEF64_03810 cytochrome c family protein K08738 CYC; cytochrome c D NEF64_15045 atpA; F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D NEF64_15035 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D NEF64_15040 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D NEF64_15050 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D NEF64_15030 ATP synthase F1 subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D NEF64_14880 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D NEF64_14865 hypothetical protein K02109 ATPF0B; F-type H+-transporting ATPase subunit b D NEF64_14875 F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D NEF64_00080 ppa; inorganic diphosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] D NEF64_10195 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation by Calvin cycle [PATH:saer00710] D NEF64_06250 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D NEF64_06240 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D NEF64_06270 class I fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D NEF64_16655 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D NEF64_16035 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D NEF64_16040 rpiA; ribose-5-phosphate isomerase RpiA K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D NEF64_02410 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D NEF64_12100 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D NEF64_01130 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D NEF64_16030 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D NEF64_00125 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D NEF64_10100 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D NEF64_05075 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D NEF64_02660 NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D NEF64_15655 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D NEF64_18420 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] C 00720 Other carbon fixation pathways [PATH:saer00720] D NEF64_05075 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D NEF64_00125 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D NEF64_15655 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D NEF64_18420 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D NEF64_15130 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D NEF64_18085 fumC; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D NEF64_15695 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D NEF64_15670 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D NEF64_15705 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D NEF64_15700 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D NEF64_15645 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D NEF64_01600 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D NEF64_11185 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NEF64_15390 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NEF64_15415 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NEF64_16265 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NEF64_12590 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D NEF64_16065 acnA; aconitate hydratase AcnA K01681 ACO; aconitate hydratase [EC:4.2.1.3] D NEF64_06050 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D NEF64_05610 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D NEF64_05605 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D NEF64_13210 accD; acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D NEF64_03025 mce; methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D NEF64_03035 scpA; methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D NEF64_04910 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3] D NEF64_02760 folD; bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D NEF64_05215 metF; methylenetetrahydrofolate reductase [NAD(P)H] K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D NEF64_07230 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D NEF64_11550 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] C 00680 Methane metabolism [PATH:saer00680] D NEF64_06150 Zn-dependent alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D NEF64_14385 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D NEF64_14375 fghA; S-formylglutathione hydrolase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12] D NEF64_02415 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D NEF64_08345 glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D NEF64_13305 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D NEF64_00125 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D NEF64_15655 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D NEF64_18420 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D NEF64_06270 class I fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D NEF64_16655 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D NEF64_07230 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D NEF64_11550 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D NEF64_17595 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D NEF64_03830 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D NEF64_03825 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D NEF64_14320 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 00910 Nitrogen metabolism [PATH:saer00910] D NEF64_08025 nitronate monooxygenase family protein K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16] D NEF64_08410 nitronate monooxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16] D NEF64_17405 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D NEF64_05590 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D NEF64_00355 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D NEF64_00370 NAD(P)-dependent oxidoreductase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D NEF64_07510 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] D NEF64_13495 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] C 00920 Sulfur metabolism [PATH:saer00920] D NEF64_11610 sulfate ABC transporter substrate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D NEF64_11615 cysT; sulfate ABC transporter permease subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein D NEF64_11620 cysW; sulfate ABC transporter permease subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein D NEF64_11625 sulfate/molybdate ABC transporter ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D NEF64_00310 NAD(P)H-dependent oxidoreductase K00299 ssuE; FMN reductase [EC:1.5.1.38] D NEF64_10700 cysN; sulfate adenylyltransferase subunit CysN K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D NEF64_10695 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D NEF64_10705 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D NEF64_06910 phosphoadenylyl-sulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10] D NEF64_18455 sulfite oxidase K00387 SUOX; sulfite oxidase [EC:1.8.3.1] D NEF64_10860 sulfite reductase flavoprotein subunit alpha K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2] D NEF64_06920 nitrite/sulfite reductase K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2] D NEF64_15370 sseA; 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D NEF64_04790 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D NEF64_11980 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D NEF64_14665 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D NEF64_01500 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D NEF64_14825 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-] D NEF64_12915 LLM class flavin-dependent oxidoreductase K17228 sfnG; dimethylsulfone monooxygenase [EC:1.14.14.35] D NEF64_02510 acyl-CoA dehydrogenase K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41] D NEF64_10450 acyl-CoA dehydrogenase C-terminal domain-containing protein K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:saer00061] D NEF64_06050 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D NEF64_05610 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D NEF64_05605 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D NEF64_13210 accD; acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D NEF64_12700 acyl carrier protein K02078 acpP; acyl carrier protein D NEF64_07070 acyl carrier protein K02078 acpP; acyl carrier protein D NEF64_09900 acyltransferase domain-containing protein K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D NEF64_12715 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D NEF64_01995 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D NEF64_12695 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D NEF64_12705 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D NEF64_17360 glucose 1-dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D NEF64_15720 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D NEF64_12520 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D NEF64_03860 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D NEF64_03215 nitronate monooxygenase K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9] D NEF64_11310 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D NEF64_16130 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:saer00071] D NEF64_11185 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NEF64_15390 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NEF64_15415 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NEF64_16265 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NEF64_11315 thiolase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D NEF64_04285 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D NEF64_06190 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D NEF64_11320 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D NEF64_06145 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D NEF64_06185 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D NEF64_05540 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D NEF64_11310 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D NEF64_16130 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D NEF64_11065 FAD-dependent oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] D NEF64_06150 Zn-dependent alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D NEF64_14385 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D NEF64_05580 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis [PATH:saer00100] D NEF64_03365 sterol desaturase family protein K00227 SC5DL; Delta7-sterol 5-desaturase [EC:1.14.19.20] C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:saer00561] D NEF64_08345 glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D NEF64_05580 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D NEF64_05040 NAD(P)-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D NEF64_04185 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30] D NEF64_02000 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D NEF64_02375 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D NEF64_15485 glycosyltransferase family 1 protein K27597 K27597; 1,2-diacylglycerol 3-alpha-glucosyltransferase/glucuronosyltransferase [EC:2.4.1.337 2.4.1.-] D NEF64_17550 NPCBM/NEW2 domain-containing protein K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] C 00564 Glycerophospholipid metabolism [PATH:saer00564] D NEF64_01150 NAD(P)-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D NEF64_02375 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D NEF64_12935 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3] D NEF64_15745 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D NEF64_12545 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D NEF64_12580 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D NEF64_12585 phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D NEF64_04760 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] C 00565 Ether lipid metabolism D NEF64_12935 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3] C 00600 Sphingolipid metabolism [PATH:saer00600] D NEF64_09315 DUF4982 domain-containing protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D NEF64_11670 DUF4982 domain-containing protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D NEF64_17550 NPCBM/NEW2 domain-containing protein K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] D NEF64_11680 family 20 glycosylhydrolase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D NEF64_12885 family 20 glycosylhydrolase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism [PATH:saer00592] D NEF64_11315 thiolase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 01040 Biosynthesis of unsaturated fatty acids [PATH:saer01040] D NEF64_09160 GDSL-type esterase/lipase family protein K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D NEF64_10735 arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D NEF64_06175 acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] D NEF64_09110 acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] D NEF64_05360 acyl-CoA thioesterase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-] B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:saer00230] D NEF64_15285 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D NEF64_03990 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D NEF64_01590 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D NEF64_10470 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D NEF64_02955 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D NEF64_10175 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D NEF64_05795 purL; phosphoribosylformylglycinamidine synthase subunit PurL K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3] D NEF64_06785 purS; phosphoribosylformylglycinamidine synthase subunit PurS K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3] D NEF64_06780 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D NEF64_10180 purM; phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D NEF64_17585 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18] D NEF64_17590 purE; 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D NEF64_06790 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D NEF64_14915 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D NEF64_01120 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D NEF64_07975 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D NEF64_02865 pgeF; peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D NEF64_10115 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D NEF64_10160 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D NEF64_14970 rdgB; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D NEF64_08040 xanthine dehydrogenase family protein molybdopterin-binding subunit K11177 yagR; xanthine dehydrogenase YagR molybdenum-binding subunit [EC:1.17.1.4] D NEF64_08165 xanthine dehydrogenase family protein molybdopterin-binding subunit K11177 yagR; xanthine dehydrogenase YagR molybdenum-binding subunit [EC:1.17.1.4] D NEF64_08485 xanthine dehydrogenase family protein molybdopterin-binding subunit K11177 yagR; xanthine dehydrogenase YagR molybdenum-binding subunit [EC:1.17.1.4] D NEF64_08495 xanthine dehydrogenase family protein molybdopterin-binding subunit K11177 yagR; xanthine dehydrogenase YagR molybdenum-binding subunit [EC:1.17.1.4] D NEF64_09570 xanthine dehydrogenase family protein molybdopterin-binding subunit K11177 yagR; xanthine dehydrogenase YagR molybdenum-binding subunit [EC:1.17.1.4] D NEF64_15760 xanthine dehydrogenase family protein molybdopterin-binding subunit K11177 yagR; xanthine dehydrogenase YagR molybdenum-binding subunit [EC:1.17.1.4] D NEF64_15765 xanthine dehydrogenase family protein molybdopterin-binding subunit K11177 yagR; xanthine dehydrogenase YagR molybdenum-binding subunit [EC:1.17.1.4] D NEF64_08045 xanthine dehydrogenase family protein subunit M K11178 yagS; xanthine dehydrogenase YagS FAD-binding subunit [EC:1.17.1.4] D NEF64_08160 xanthine dehydrogenase family protein subunit M K11178 yagS; xanthine dehydrogenase YagS FAD-binding subunit [EC:1.17.1.4] D NEF64_08500 xanthine dehydrogenase family protein subunit M K11178 yagS; xanthine dehydrogenase YagS FAD-binding subunit [EC:1.17.1.4] D NEF64_09575 xanthine dehydrogenase family protein subunit M K11178 yagS; xanthine dehydrogenase YagS FAD-binding subunit [EC:1.17.1.4] D NEF64_15755 xanthine dehydrogenase family protein subunit M K11178 yagS; xanthine dehydrogenase YagS FAD-binding subunit [EC:1.17.1.4] D NEF64_08050 paoA; aldehyde dehydrogenase iron-sulfur subunit K13483 yagT; xanthine dehydrogenase YagT iron-sulfur-binding subunit D NEF64_08155 paoA; aldehyde dehydrogenase iron-sulfur subunit K13483 yagT; xanthine dehydrogenase YagT iron-sulfur-binding subunit D NEF64_08505 paoA; aldehyde dehydrogenase iron-sulfur subunit K13483 yagT; xanthine dehydrogenase YagT iron-sulfur-binding subunit D NEF64_09580 2Fe-2S iron-sulfur cluster-binding protein K13483 yagT; xanthine dehydrogenase YagT iron-sulfur-binding subunit D NEF64_15750 2Fe-2S iron-sulfur cluster-binding protein K13483 yagT; xanthine dehydrogenase YagT iron-sulfur-binding subunit D NEF64_06755 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D NEF64_18070 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D NEF64_16345 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D NEF64_16415 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D NEF64_14570 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1] D NEF64_02800 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D NEF64_00840 Ppx/GppA family phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D NEF64_03840 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D NEF64_12005 AMP nucleosidase K01241 amn; AMP nucleosidase [EC:3.2.2.4] D NEF64_17835 adenosine deaminase K21053 ade; adenine deaminase [EC:3.5.4.2] D NEF64_06715 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D NEF64_10290 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D NEF64_10700 cysN; sulfate adenylyltransferase subunit CysN K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D NEF64_10695 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] C 00240 Pyrimidine metabolism [PATH:saer00240] D NEF64_13345 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D NEF64_13350 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D NEF64_14285 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D NEF64_03340 pyrC; dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D NEF64_14290 amidohydrolase family protein K01465 URA4; dihydroorotase [EC:3.5.2.3] D NEF64_16120 quinone-dependent dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2] D NEF64_03155 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D NEF64_13190 pyrF; orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D NEF64_12560 pyrH; UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D NEF64_10160 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D NEF64_10290 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D NEF64_01350 Maf family protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D NEF64_17515 Maf family protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D NEF64_12640 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2] D NEF64_04720 cmk; (d)CMP kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D NEF64_07975 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D NEF64_06890 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5] D NEF64_06880 dcd; dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D NEF64_16345 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D NEF64_16415 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D NEF64_19185 tmk; dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D NEF64_07330 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D NEF64_15230 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21] D NEF64_15320 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D NEF64_16155 malonic semialdehyde reductase K09019 rutE; 3-hydroxypropanoate dehydrogenase [EC:1.1.1.-] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:saer00250] D NEF64_02030 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D NEF64_01100 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D NEF64_03260 isoaspartyl peptidase/L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D NEF64_13650 amidotransferase 1, exosortase A system-associated K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D NEF64_13765 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D NEF64_02185 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D NEF64_00615 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D NEF64_03840 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D NEF64_14915 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D NEF64_14285 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D NEF64_00355 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D NEF64_00370 NAD(P)-dependent oxidoreductase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D NEF64_17405 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D NEF64_11175 putA; bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D NEF64_05590 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D NEF64_13345 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D NEF64_13350 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D NEF64_18190 glsA; glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2] D NEF64_06780 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D NEF64_04880 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D NEF64_11650 SIS domain-containing protein K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D NEF64_10470 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:saer00260] D NEF64_03210 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D NEF64_12030 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D NEF64_16505 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D NEF64_05135 thrB; homoserine kinase K02204 thrB2; homoserine kinase type II [EC:2.7.1.39] D NEF64_03105 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D NEF64_14950 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D NEF64_00320 beta-eliminating lyase-related protein K01620 ltaE; threonine aldolase [EC:4.1.2.48] D NEF64_02415 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D NEF64_08345 glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D NEF64_17595 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D NEF64_03830 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D NEF64_03825 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D NEF64_14320 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D NEF64_02385 hemA; 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37] D NEF64_13565 FAD-dependent oxidoreductase K00274 MAO; monoamine oxidase [EC:1.4.3.4] D NEF64_05160 gcvPA; aminomethyl-transferring glycine dehydrogenase subunit GcvPA K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D NEF64_05165 gcvPB; aminomethyl-transferring glycine dehydrogenase subunit GcvPB K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D NEF64_05150 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D NEF64_05365 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D NEF64_11295 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D NEF64_15630 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D NEF64_05155 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein D NEF64_12580 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D NEF64_05270 threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D NEF64_13625 threonine/serine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D NEF64_12855 amino acid deaminase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18] D NEF64_13205 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D NEF64_13200 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] C 00270 Cysteine and methionine metabolism [PATH:saer00270] D NEF64_04790 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D NEF64_11980 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D NEF64_14665 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D NEF64_15365 metC; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D NEF64_05225 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D NEF64_05220 homocysteine S-methyltransferase family protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D NEF64_16220 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D NEF64_16070 mtnP; S-methyl-5'-thioadenosine phosphorylase K00772 mtaP; 5'-methylthioadenosine phosphorylase [EC:2.4.2.28] D NEF64_02865 pgeF; peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D NEF64_02860 cystathionine gamma-synthase family protein K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11] D NEF64_05330 GAF domain-containing protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14] D NEF64_11990 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D NEF64_03210 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D NEF64_12030 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D NEF64_16505 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D NEF64_01500 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D NEF64_14825 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-] D NEF64_11770 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D NEF64_04085 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D NEF64_15000 gshB; glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3] D NEF64_02030 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D NEF64_15370 sseA; 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D NEF64_15655 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D NEF64_18420 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D NEF64_03830 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D NEF64_03825 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00280 Valine, leucine and isoleucine degradation [PATH:saer00280] D NEF64_11770 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D NEF64_13805 Glu/Leu/Phe/Val dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9] D NEF64_16285 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D NEF64_16280 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D NEF64_16275 2-oxo acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D NEF64_05365 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D NEF64_11295 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D NEF64_15630 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D NEF64_06145 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D NEF64_06185 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D NEF64_11425 acyl-CoA dehydrogenase family protein K00253 IVD; isovaleryl-CoA dehydrogenase [EC:1.3.8.4] D NEF64_04285 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D NEF64_11315 thiolase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D NEF64_03050 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3] D NEF64_03005 acyl-CoA carboxylase subunit beta K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15] D NEF64_03025 mce; methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D NEF64_03035 scpA; methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D NEF64_04290 mmsB; 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] D NEF64_05275 NAD(P)-dependent oxidoreductase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] D NEF64_04265 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D NEF64_05580 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D NEF64_11410 ATP-grasp domain-containing protein K01968 MCCC1; 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4] D NEF64_11420 methylcrotonoyl-CoA carboxylase K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4] D NEF64_14795 CoA transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5] D NEF64_14780 3-oxoacid CoA-transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] D NEF64_11185 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NEF64_15390 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NEF64_15415 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NEF64_16265 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:saer00290] D NEF64_05270 threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D NEF64_13625 threonine/serine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D NEF64_04615 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D NEF64_04620 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D NEF64_14835 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D NEF64_14330 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D NEF64_14800 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D NEF64_14335 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D NEF64_14340 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D NEF64_10020 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D NEF64_11770 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D NEF64_13805 Glu/Leu/Phe/Val dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9] D NEF64_14350 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:saer00300] D NEF64_16505 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D NEF64_03210 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D NEF64_12030 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D NEF64_09985 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D NEF64_15875 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D NEF64_17920 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117] D NEF64_04940 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D NEF64_07400 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D NEF64_00605 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D NEF64_13700 pyridoxal-dependent decarboxylase, exosortase A system-associated K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D NEF64_14635 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D NEF64_14630 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:saer00310] D NEF64_15635 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D NEF64_05365 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D NEF64_11295 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D NEF64_15630 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D NEF64_05540 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D NEF64_04285 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D NEF64_11185 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NEF64_15390 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NEF64_15415 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NEF64_16265 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NEF64_05535 CoA transferase K01041 gcdG; glutaryl-CoA transferase [EC:2.8.3.-] D NEF64_05580 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00220 Arginine biosynthesis [PATH:saer00220] D NEF64_04945 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D NEF64_02185 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D NEF64_00615 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D NEF64_18190 glsA; glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2] D NEF64_06780 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D NEF64_05590 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D NEF64_13345 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D NEF64_13350 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D NEF64_17405 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D NEF64_02030 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D NEF64_10405 argJ; bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] D NEF64_02745 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D NEF64_12660 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D NEF64_04940 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] C 00330 Arginine and proline metabolism [PATH:saer00330] D NEF64_02450 agmatine deiminase family protein K10536 aguA; agmatine deiminase [EC:3.5.3.12] D NEF64_02460 aguB; N-carbamoylputrescine amidase K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53] D NEF64_13630 type III PLP-dependent enzyme K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D NEF64_05580 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D NEF64_13565 FAD-dependent oxidoreductase K00274 MAO; monoamine oxidase [EC:1.4.3.4] D NEF64_15095 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D NEF64_10510 arginine N-succinyltransferase K00673 astA; arginine N-succinyltransferase [EC:2.3.1.109] D NEF64_10515 N-succinylarginine dihydrolase K01484 astB; succinylarginine dihydrolase [EC:3.5.3.23] D NEF64_06940 astD; succinylglutamate-semialdehyde dehydrogenase K06447 astD; succinylglutamic semialdehyde dehydrogenase [EC:1.2.1.71] D NEF64_11780 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D NEF64_11175 putA; bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D NEF64_07080 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D NEF64_17710 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] D NEF64_02030 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] C 00340 Histidine metabolism [PATH:saer00340] D NEF64_17480 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D NEF64_18120 phosphoribosyl-ATP diphosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31] D NEF64_10465 hisI; phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19] D NEF64_18105 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] D NEF64_18100 hisH; imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D NEF64_18110 hisF; imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D NEF64_18095 hisB; imidazoleglycerol-phosphate dehydratase HisB K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] D NEF64_01495 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D NEF64_00635 hisN; histidinol-phosphatase K05602 hisN; histidinol-phosphatase [EC:3.1.3.15] D NEF64_01940 histidinol phosphate phosphatase K05602 hisN; histidinol-phosphatase [EC:3.1.3.15] D NEF64_17485 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] D NEF64_05580 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D NEF64_13565 FAD-dependent oxidoreductase K00274 MAO; monoamine oxidase [EC:1.4.3.4] D NEF64_00085 egtD; L-histidine N(alpha)-methyltransferase K18911 egtD; L-histidine Nalpha-methyltransferase [EC:2.1.1.44] C 00350 Tyrosine metabolism [PATH:saer00350] D NEF64_02030 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D NEF64_01495 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D NEF64_11435 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D NEF64_11455 hmgA; homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5] D NEF64_11460 maiA; maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2] D NEF64_16295 fumarylacetoacetate hydrolase family protein K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2] D NEF64_13565 FAD-dependent oxidoreductase K00274 MAO; monoamine oxidase [EC:1.4.3.4] D NEF64_06150 Zn-dependent alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D NEF64_14385 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D NEF64_05865 fumarylacetoacetate hydrolase family protein K16165 nagK; fumarylpyruvate hydrolase [EC:3.7.1.20] C 00360 Phenylalanine metabolism [PATH:saer00360] D NEF64_15730 phhA; phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1] D NEF64_13565 FAD-dependent oxidoreductase K00274 MAO; monoamine oxidase [EC:1.4.3.4] D NEF64_03030 enoyl-CoA hydratase-related protein K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18] D NEF64_04285 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D NEF64_03305 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D NEF64_02030 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D NEF64_01495 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D NEF64_11435 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D NEF64_04455 katG; catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21] D NEF64_15095 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D NEF64_11065 FAD-dependent oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] D NEF64_08635 fumarylacetoacetate hydrolase family protein K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80] C 00380 Tryptophan metabolism [PATH:saer00380] D NEF64_06800 kynU; kynureninase K01556 KYNU; kynureninase [EC:3.7.1.3] D NEF64_15635 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D NEF64_05365 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D NEF64_11295 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D NEF64_15630 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D NEF64_05540 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D NEF64_04285 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D NEF64_11185 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NEF64_15390 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NEF64_15415 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NEF64_16265 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NEF64_13565 FAD-dependent oxidoreductase K00274 MAO; monoamine oxidase [EC:1.4.3.4] D NEF64_05580 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D NEF64_15095 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D NEF64_04590 catalase K03781 katE; catalase [EC:1.11.1.6] D NEF64_11715 catalase K03781 katE; catalase [EC:1.11.1.6] D NEF64_04455 katG; catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:saer00400] D NEF64_07260 3-deoxy-7-phosphoheptulonate synthase class II K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D NEF64_06030 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D NEF64_05615 aroQ; type II 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D NEF64_01355 shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D NEF64_06035 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D NEF64_04725 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D NEF64_03850 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D NEF64_12110 chorismate-binding protein K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D NEF64_12120 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D NEF64_12125 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D NEF64_13195 phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24] D NEF64_12130 trpC; indole-3-glycerol phosphate synthase TrpC K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48] D NEF64_13205 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D NEF64_13200 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D NEF64_02635 chorismate mutase K04092 tyrA1; chorismate mutase [EC:5.4.99.5] D NEF64_01490 prephenate/arogenate dehydrogenase family protein K00220 tyrC; cyclohexadieny/prephenate dehydrogenase [EC:1.3.1.43 1.3.1.12] D NEF64_03805 prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51] D NEF64_02030 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D NEF64_01495 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D NEF64_15730 phhA; phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:saer00410] D NEF64_05580 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D NEF64_02350 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D NEF64_04285 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D NEF64_04265 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] C 00430 Taurine and hypotaurine metabolism [PATH:saer00430] D NEF64_16125 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D NEF64_16765 gamma-glutamyltransferase family protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D NEF64_13765 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D NEF64_17405 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D NEF64_07230 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] C 00440 Phosphonate and phosphinate metabolism D NEF64_10295 MBL fold metallo-hydrolase K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55] C 00450 Selenocompound metabolism [PATH:saer00450] D NEF64_15365 metC; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D NEF64_05225 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D NEF64_05220 homocysteine S-methyltransferase family protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D NEF64_02860 cystathionine gamma-synthase family protein K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11] D NEF64_16090 cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D NEF64_09190 FAD-dependent oxidoreductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D NEF64_13390 NAD(P)/FAD-dependent oxidoreductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D NEF64_13725 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D NEF64_10700 cysN; sulfate adenylyltransferase subunit CysN K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D NEF64_10695 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D NEF64_10305 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:saer00460] D NEF64_08065 exo 1,3/1,4-beta-D-glucan glucohydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D NEF64_10915 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D NEF64_11025 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D NEF64_11690 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D NEF64_12355 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D NEF64_16725 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D NEF64_17545 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D NEF64_16125 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D NEF64_16765 gamma-glutamyltransferase family protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D NEF64_03260 isoaspartyl peptidase/L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D NEF64_02415 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:saer00470] D NEF64_15405 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D NEF64_14595 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D NEF64_18190 glsA; glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2] D NEF64_06780 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D NEF64_02380 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D NEF64_14620 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D NEF64_12855 amino acid deaminase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18] D NEF64_00605 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D NEF64_13700 pyridoxal-dependent decarboxylase, exosortase A system-associated K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D NEF64_05125 FAD-binding oxidoreductase K19746 dauA; D-arginine dehydrogenase [EC:1.4.99.6] D NEF64_12285 aldehyde dehydrogenase (NADP(+)) K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26] C 00480 Glutathione metabolism [PATH:saer00480] D NEF64_16125 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D NEF64_16765 gamma-glutamyltransferase family protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D NEF64_04085 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D NEF64_15000 gshB; glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3] D NEF64_10150 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D NEF64_12095 leucyl aminopeptidase family protein K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D NEF64_00340 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D NEF64_00350 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D NEF64_05705 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D NEF64_07405 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D NEF64_11290 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D NEF64_14775 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D NEF64_15465 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D NEF64_17455 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D NEF64_15175 gorA; glutathione-disulfide reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7] D NEF64_12590 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D NEF64_16025 gnd; decarboxylating 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D NEF64_05295 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D NEF64_12665 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D NEF64_12610 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9] D NEF64_12000 peroxiredoxin K24138 prx3; glutaredoxin/glutathione-dependent peroxiredoxin [EC:1.11.1.25 1.11.1.27] D NEF64_13630 type III PLP-dependent enzyme K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation [PATH:saer00511] D NEF64_09315 DUF4982 domain-containing protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D NEF64_11670 DUF4982 domain-containing protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D NEF64_11680 family 20 glycosylhydrolase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D NEF64_12885 family 20 glycosylhydrolase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D NEF64_11685 glycoside hydrolase family 2 protein K01192 E3.2.1.25; beta-mannosidase [EC:3.2.1.25] D NEF64_05415 alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51] D NEF64_07685 alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51] D NEF64_09300 alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51] D NEF64_11705 alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51] D NEF64_11640 N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase K01444 AGA; N4-(beta-N-acetylglucosaminyl)-L-asparaginase [EC:3.5.1.26] C 00540 Lipopolysaccharide biosynthesis C 00542 O-Antigen repeat unit biosynthesis C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:saer00541] D NEF64_07315 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D NEF64_02495 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D NEF64_03645 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D NEF64_14735 NAD-dependent epimerase/dehydratase family protein K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D NEF64_18490 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D NEF64_18500 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D NEF64_18505 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D NEF64_18495 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D NEF64_17985 sugar phosphate nucleotidyltransferase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D NEF64_02335 phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D NEF64_04875 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D NEF64_07310 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D NEF64_07305 wecC; UDP-N-acetyl-D-mannosamine dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336] C 00550 Peptidoglycan biosynthesis [PATH:saer00550] D NEF64_02850 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D NEF64_14600 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D NEF64_14605 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D NEF64_14620 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D NEF64_14635 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D NEF64_14595 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D NEF64_14630 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D NEF64_12550 uppS; polyprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D NEF64_00375 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D NEF64_14625 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D NEF64_14610 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D NEF64_13570 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D NEF64_15300 transglycosylase domain-containing protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D NEF64_01420 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D NEF64_12790 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D NEF64_07470 serine hydrolase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D NEF64_10315 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] C 00552 Teichoic acid biosynthesis [PATH:saer00552] D NEF64_00375 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:saer00543] D NEF64_07130 glycosyltransferase K16703 wcaL; colanic acid/amylovoran/stewartan biosynthesis glycosyltransferase WcaL/AmsK/CpsK [EC:2.4.-.-] D NEF64_04790 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D NEF64_03635 glycosyltransferase family 4 protein K13657 gumH; alpha-1,3-mannosyltransferase [EC:2.4.1.252] D NEF64_03640 polysaccharide biosynthesis protein GumK K13659 gumK; 2-beta-glucuronyltransferase [EC:2.4.1.264] D NEF64_03670 polysaccharide pyruvyl transferase family protein K13665 gumL; pyruvyltransferase D NEF64_01010 sugar transferase K16566 exoY; exopolysaccharide production protein ExoY D NEF64_12830 acyltransferase K16568 exoZ; exopolysaccharide production protein ExoZ B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:saer00730] D NEF64_01910 thiC; phosphomethylpyrimidine synthase ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17] D NEF64_02555 thiD; bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D NEF64_00205 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D NEF64_13605 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D NEF64_13610 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D NEF64_11815 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D NEF64_05625 thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10] D NEF64_06275 thiE; thiamine phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D NEF64_17495 thiL; thiamine-phosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16] D NEF64_07720 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D NEF64_06715 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:saer00740] D NEF64_01235 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D NEF64_01560 ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D NEF64_01570 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D NEF64_01555 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D NEF64_01565 riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9] D NEF64_15335 bifunctional riboflavin kinase/FAD synthetase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D NEF64_09695 histidine-type phosphatase K01093 appA; 4-phytase / acid phosphatase [EC:3.1.3.26 3.1.3.2] D NEF64_00310 NAD(P)H-dependent oxidoreductase K00299 ssuE; FMN reductase [EC:1.5.1.38] D NEF64_15360 bluB; 5,6-dimethylbenzimidazole synthase K04719 bluB; 5,6-dimethylbenzimidazole synthase [EC:1.13.11.79] D NEF64_15285 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] C 00750 Vitamin B6 metabolism [PATH:saer00750] D NEF64_03900 pdxH; pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5] D NEF64_03825 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D NEF64_10135 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase PdxA K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262] D NEF64_03160 pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2] D NEF64_03105 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D NEF64_14950 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] C 00760 Nicotinate and nicotinamide metabolism [PATH:saer00760] D NEF64_01100 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D NEF64_04670 nadA; quinolinate synthase NadA K03517 nadA; quinolinate synthase [EC:2.5.1.72] D NEF64_04675 nadC; carboxylating nicotinate-nucleotide diphosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] D NEF64_02625 pncB; nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D NEF64_07975 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D NEF64_17705 nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D NEF64_10290 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D NEF64_03800 nudC; NAD(+) diphosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22] D NEF64_05735 NAD(+) synthase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1] D NEF64_10240 CinA family protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42] D NEF64_09385 nicotinamidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-] D NEF64_15140 NAD-dependent deacylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313] D NEF64_07925 NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] D NEF64_02590 NAD(P) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D NEF64_02595 NAD(P) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D NEF64_02600 NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1] D NEF64_03465 (2Fe-2S)-binding protein K18029 nicA; nicotinate dehydrogenase subunit A [EC:1.17.2.1] D NEF64_03470 molybdopterin-dependent oxidoreductase K18030 nicB; nicotinate dehydrogenase subunit B [EC:1.17.2.1] C 00770 Pantothenate and CoA biosynthesis [PATH:saer00770] D NEF64_14330 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D NEF64_14800 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D NEF64_14335 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D NEF64_14340 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D NEF64_10020 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D NEF64_05755 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D NEF64_02350 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D NEF64_06375 type III pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33] D NEF64_07335 coaBC; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D NEF64_10290 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D NEF64_15530 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D NEF64_01360 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D NEF64_03165 acpS; holo-ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D NEF64_11770 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D NEF64_05580 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00780 Biotin metabolism [PATH:saer00780] D NEF64_12695 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D NEF64_12705 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D NEF64_17360 glucose 1-dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D NEF64_15720 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D NEF64_12520 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D NEF64_03860 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D NEF64_07065 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D NEF64_16660 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D NEF64_16670 adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D NEF64_16665 bioD; dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3] D NEF64_03040 bioB; biotin synthase BioB K01012 bioB; biotin synthase [EC:2.8.1.6] D NEF64_06370 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:saer00785] D NEF64_04975 lipB; lipoyl(octanoyl) transferase LipB K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181] D NEF64_10230 lipA; lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8] D NEF64_05365 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D NEF64_11295 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D NEF64_15630 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D NEF64_11970 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D NEF64_11965 pyruvate dehydrogenase complex E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D NEF64_05350 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D NEF64_15640 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D NEF64_15635 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D NEF64_16285 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D NEF64_16280 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D NEF64_16275 2-oxo acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D NEF64_05160 gcvPA; aminomethyl-transferring glycine dehydrogenase subunit GcvPA K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D NEF64_05165 gcvPB; aminomethyl-transferring glycine dehydrogenase subunit GcvPB K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D NEF64_05150 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D NEF64_05155 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:saer00790] D NEF64_14370 folE; GTP cyclohydrolase I FolE K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16] D NEF64_10815 alkaline phosphatase D family protein K01113 phoD; alkaline phosphatase D [EC:3.1.3.1] D NEF64_18265 alkaline phosphatase D family protein K01113 phoD; alkaline phosphatase D [EC:3.1.3.1] D NEF64_14360 dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D NEF64_06840 dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D NEF64_02470 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D NEF64_02570 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D NEF64_15330 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D NEF64_13215 bifunctional folylpolyglutamate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D NEF64_01235 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D NEF64_01560 ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D NEF64_02025 pabB; aminodeoxychorismate synthase component I K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38] D NEF64_03080 4a-hydroxytetrahydrobiopterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D NEF64_15730 phhA; phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1] D NEF64_04960 queE; 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D NEF64_04955 queC; 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D NEF64_17865 queF; preQ(1) synthase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D NEF64_07930 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D NEF64_12135 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D NEF64_04770 molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D NEF64_05665 moaB; molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75] D NEF64_06440 molybdopterin molybdotransferase MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] C 00670 One carbon pool by folate [PATH:saer00670] D NEF64_15330 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D NEF64_04910 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3] D NEF64_02760 folD; bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D NEF64_02415 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D NEF64_10175 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D NEF64_01120 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D NEF64_10045 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D NEF64_05150 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D NEF64_05225 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D NEF64_05220 homocysteine S-methyltransferase family protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D NEF64_15320 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D NEF64_05215 metF; methylenetetrahydrofolate reductase [NAD(P)H] K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D NEF64_06225 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:saer00860] D NEF64_02385 hemA; 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37] D NEF64_01585 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D NEF64_06425 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D NEF64_07185 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D NEF64_01160 hemC; hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D NEF64_01340 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] D NEF64_04995 hemF; oxygen-dependent coproporphyrinogen oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3] D NEF64_12265 radical SAM protein K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3] D NEF64_01335 CopD family protein K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-] D NEF64_02895 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] D NEF64_06505 cobA; uroporphyrinogen-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107] D NEF64_06930 cobA; uroporphyrinogen-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107] D NEF64_03135 heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141] D NEF64_11830 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9] D NEF64_06470 cobI; precorrin-2 C(20)-methyltransferase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151] D NEF64_06460 cobalamin biosynthesis protein CobG K02229 cobG; precorrin-3B synthase [EC:1.14.13.83] D NEF64_06475 cobJ; precorrin-3B C(17)-methyltransferase K05934 cobJ; precorrin-3B C17-methyltransferase / cobalt-factor III methyltransferase [EC:2.1.1.131 2.1.1.272] D NEF64_06495 cobM; precorrin-4 C(11)-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271] D NEF64_06490 cobalamin biosynthesis protein K02189 cbiG; cobalt-precorrin 5A hydrolase [EC:3.7.1.12] D NEF64_06510 cobF; precorrin-6A synthase (deacetylating) K02228 cobF; precorrin-6A synthase [EC:2.1.1.152] D NEF64_06480 cobalt-precorrin-6A reductase K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106] D NEF64_06485 cbiE; precorrin-6y C5,15-methyltransferase (decarboxylating) subunit CbiE K00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase / cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196] D NEF64_06465 precorrin-8X methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60] D NEF64_06500 cobyrinate a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11] D NEF64_06455 cobN; cobaltochelatase subunit CobN K02230 cobN; cobaltochelatase CobN [EC:6.6.1.2] D NEF64_17410 cobS; cobaltochelatase subunit CobS K09882 cobS; cobaltochelatase CobS [EC:6.6.1.2] D NEF64_17415 cobT; cobaltochelatase subunit CobT K09883 cobT; cobaltochelatase CobT [EC:6.6.1.2] D NEF64_00095 cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D NEF64_11390 cobO; cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D NEF64_11350 cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10] D NEF64_11345 cbiB; adenosylcobinamide-phosphate synthase CbiB K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10] D NEF64_11340 pyridoxal phosphate-dependent class II aminotransferase K02225 cobC1; cobalamin biosynthesis protein CobC D NEF64_11335 cobU; bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62] D NEF64_11365 cobT; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21] D NEF64_07770 magnesium chelatase subunit D K03404 chlD; magnesium chelatase subunit D [EC:6.6.1.1] D NEF64_07765 ATP-binding protein K03405 chlI; magnesium chelatase subunit I [EC:6.6.1.1] D NEF64_07805 chlG; chlorophyll synthase ChlG K04040 chlG; chlorophyll/bacteriochlorophyll a synthase [EC:2.5.1.62 2.5.1.133] D NEF64_07790 bchF; 2-vinyl bacteriochlorophyllide hydratase K11336 bchF; 3-vinyl bacteriochlorophyllide hydratase [EC:4.2.1.165] D NEF64_07815 geranylgeranyl diphosphate reductase K10960 chlP; geranylgeranyl diphosphate/geranylgeranyl-bacteriochlorophyllide a reductase [EC:1.3.1.83 1.3.1.111] D NEF64_05785 bfr; bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:saer00130] D NEF64_04100 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D NEF64_03205 ubiG; bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64] D NEF64_01215 UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-] D NEF64_07350 class I SAM-dependent methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D NEF64_17675 demethoxyubiquinone hydroxylase family protein K06134 COQ7; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60] D NEF64_05310 wrbA; NAD(P)H:quinone oxidoreductase K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D NEF64_11435 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:saer00900] D NEF64_11815 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D NEF64_12540 1-deoxy-D-xylulose-5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D NEF64_10250 bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K12506 ispDF; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase / 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:2.7.7.60 4.6.1.12] D NEF64_05690 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D NEF64_03275 ispG; flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D NEF64_05140 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D NEF64_11185 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NEF64_15390 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NEF64_15415 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NEF64_16265 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NEF64_15525 polyprenyl synthetase family protein K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] D NEF64_02640 polyprenyl synthetase family protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D NEF64_12550 uppS; polyprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D NEF64_07815 geranylgeranyl diphosphate reductase K10960 chlP; geranylgeranyl diphosphate/geranylgeranyl-bacteriochlorophyllide a reductase [EC:1.3.1.83 1.3.1.111] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis [PATH:saer00906] D NEF64_01865 phytoene/squalene synthase family protein K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32] D NEF64_01875 phytoene desaturase K10027 crtI; phytoene desaturase [EC:1.3.99.26 1.3.99.28 1.3.99.29 1.3.99.31] D NEF64_03375 sterol desaturase family protein K15746 crtZ; beta-carotene 3-hydroxylase [EC:1.14.15.24] D NEF64_03385 glycosyltransferase K14596 crtX; zeaxanthin glucosyltransferase [EC:2.4.1.276] C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation D NEF64_05580 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00907 Pinene, camphor and geraniol degradation [PATH:saer00907] D NEF64_04285 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D NEF64_11315 thiolase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D NEF64_16035 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis [PATH:saer00523] D NEF64_18490 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D NEF64_18500 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D NEF64_18505 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D NEF64_18495 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides D NEF64_02435 chorismate mutase K04782 pchB; isochorismate pyruvate lyase [EC:4.2.99.21] C 01055 Biosynthesis of vancomycin group antibiotics D NEF64_18500 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids [PATH:saer00946] D NEF64_08065 exo 1,3/1,4-beta-D-glucan glucohydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D NEF64_10915 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D NEF64_11025 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D NEF64_11690 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D NEF64_12355 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D NEF64_16725 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D NEF64_17545 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis D NEF64_12045 bla; class A beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6] C 00332 Carbapenem biosynthesis [PATH:saer00332] D NEF64_07080 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D NEF64_17710 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00261 Monobactam biosynthesis [PATH:saer00261] D NEF64_10700 cysN; sulfate adenylyltransferase subunit CysN K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D NEF64_10695 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D NEF64_03210 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D NEF64_12030 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D NEF64_09985 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D NEF64_15875 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:saer00521] D NEF64_03990 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D NEF64_05725 inositol-3-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4] D NEF64_04110 3'(2'),5'-bisphosphate nucleotidase CysQ K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D NEF64_06295 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D NEF64_18490 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D NEF64_18500 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D NEF64_18505 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D NEF64_18495 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 00524 Neomycin, kanamycin and gentamicin biosynthesis C 00525 Acarbose and validamycin biosynthesis [PATH:saer00525] D NEF64_18490 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D NEF64_18500 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis [PATH:saer00401] D NEF64_01490 prephenate/arogenate dehydrogenase family protein K00220 tyrC; cyclohexadieny/prephenate dehydrogenase [EC:1.3.1.43 1.3.1.12] D NEF64_02030 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D NEF64_01495 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00404 Staurosporine biosynthesis D NEF64_04525 tryptophan 7-halogenase K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9] D NEF64_04530 tryptophan 7-halogenase K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9] D NEF64_04540 tryptophan 7-halogenase K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9] D NEF64_05400 tryptophan 7-halogenase K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9] D NEF64_05405 tryptophan 7-halogenase K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9] D NEF64_08130 tryptophan 7-halogenase K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9] D NEF64_09275 tryptophan 7-halogenase K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9] D NEF64_09285 tryptophan 7-halogenase K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9] D NEF64_09290 tryptophan 7-halogenase K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9] D NEF64_10945 tryptophan 7-halogenase K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9] D NEF64_11050 tryptophan 7-halogenase K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9] C 00405 Phenazine biosynthesis D NEF64_12110 chorismate-binding protein K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D NEF64_12120 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis D NEF64_09900 acyltransferase domain-containing protein K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D NEF64_12715 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D NEF64_12705 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D NEF64_17360 glucose 1-dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D NEF64_15720 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D NEF64_03860 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D NEF64_12700 acyl carrier protein K02078 acpP; acyl carrier protein D NEF64_07070 acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites [PATH:saer00999] D NEF64_16220 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D NEF64_01355 shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D NEF64_08065 exo 1,3/1,4-beta-D-glucan glucohydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D NEF64_10915 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D NEF64_11025 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D NEF64_11690 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D NEF64_12355 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D NEF64_16725 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D NEF64_17545 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:saer00362] D NEF64_11315 thiolase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D NEF64_08635 fumarylacetoacetate hydrolase family protein K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80] D NEF64_15210 4-oxalocrotonate tautomerase family protein K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D NEF64_11065 FAD-dependent oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] D NEF64_04025 2Fe-2S iron-sulfur cluster-binding protein K04755 fdx; ferredoxin, 2Fe-2S D NEF64_13600 2Fe-2S iron-sulfur cluster-binding protein K04755 fdx; ferredoxin, 2Fe-2S D NEF64_06190 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D NEF64_11320 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D NEF64_05540 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D NEF64_04285 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D NEF64_03305 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D NEF64_11185 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NEF64_15390 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NEF64_15415 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NEF64_16265 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00627 Aminobenzoate degradation [PATH:saer00627] D NEF64_15095 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D NEF64_04285 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] C 00364 Fluorobenzoate degradation [PATH:saer00364] D NEF64_01320 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D NEF64_15055 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D NEF64_15470 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D NEF64_07495 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] C 00625 Chloroalkane and chloroalkene degradation [PATH:saer00625] D NEF64_06150 Zn-dependent alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D NEF64_14385 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D NEF64_05580 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:saer00361] D NEF64_01320 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D NEF64_15055 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D NEF64_15470 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D NEF64_07495 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] C 00623 Toluene degradation [PATH:saer00623] D NEF64_01320 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D NEF64_15055 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D NEF64_15470 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D NEF64_07495 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] C 00622 Xylene degradation [PATH:saer00622] D NEF64_15210 4-oxalocrotonate tautomerase family protein K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D NEF64_08635 fumarylacetoacetate hydrolase family protein K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80] C 00633 Nitrotoluene degradation [PATH:saer00633] D NEF64_09565 alkene reductase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-] C 00642 Ethylbenzene degradation D NEF64_11315 thiolase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 00643 Styrene degradation [PATH:saer00643] D NEF64_11455 hmgA; homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5] D NEF64_11460 maiA; maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2] D NEF64_16295 fumarylacetoacetate hydrolase family protein K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2] D NEF64_15095 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] C 00791 Atrazine degradation C 00930 Caprolactam degradation [PATH:saer00930] D NEF64_17665 DJ-1/PfpI family protein K18199 inhA; cyclohexyl-isocyanide hydratase [EC:4.2.1.103] D NEF64_04285 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] C 00363 Bisphenol degradation C 00621 Dioxin degradation [PATH:saer00621] D NEF64_15210 4-oxalocrotonate tautomerase family protein K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D NEF64_08635 fumarylacetoacetate hydrolase family protein K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80] C 00626 Naphthalene degradation [PATH:saer00626] D NEF64_06150 Zn-dependent alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D NEF64_14385 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:saer03020] D NEF64_05885 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D NEF64_05880 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D NEF64_06745 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D NEF64_00850 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:saer03010] D NEF64_04710 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D NEF64_12570 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D NEF64_06640 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D NEF64_02440 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D NEF64_06695 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D NEF64_12725 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D NEF64_06585 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D NEF64_06680 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D NEF64_11840 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D NEF64_06605 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D NEF64_06740 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D NEF64_06580 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D NEF64_06735 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D NEF64_06675 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D NEF64_15240 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D NEF64_13400 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D NEF64_06655 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D NEF64_12730 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D NEF64_06630 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D NEF64_07360 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D NEF64_07280 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D NEF64_05920 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D NEF64_06625 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D NEF64_06610 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D NEF64_06615 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D NEF64_06670 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D NEF64_06685 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D NEF64_05900 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D NEF64_12735 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D NEF64_05905 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D NEF64_05925 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D NEF64_11835 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D NEF64_06660 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D NEF64_06705 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D NEF64_06645 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D NEF64_06750 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D NEF64_06690 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D NEF64_13380 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D NEF64_01955 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D NEF64_07110 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D NEF64_06635 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D NEF64_06620 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D NEF64_06665 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D NEF64_05055 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25 D NEF64_07105 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D NEF64_02915 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D NEF64_06650 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D NEF64_06700 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D NEF64_12515 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D NEF64_02005 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D NEF64_02150 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D NEF64_07430 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D NEF64_01950 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D NEF64_17610 ykgO; type B 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D NEF64_00030 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D NEF64_07525 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D NEF64_12510 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D NEF64_08070 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D NEF64_00015 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D NEF64_12495 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D NEF64_08085 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D NEF64_07540 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D NEF64_00010 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D NEF64_07545 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D NEF64_08090 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D NEF64_12490 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:saer00970] D NEF64_00020 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D NEF64_07535 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D NEF64_08080 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D NEF64_12500 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D NEF64_10350 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D NEF64_04735 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D NEF64_15885 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D NEF64_06770 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D NEF64_07205 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D NEF64_07210 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D NEF64_14400 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D NEF64_07920 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D NEF64_06210 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D NEF64_06215 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D NEF64_07140 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D NEF64_00835 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D NEF64_11765 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D NEF64_07255 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D NEF64_05500 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D NEF64_01175 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D NEF64_04075 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D NEF64_05855 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D NEF64_13810 tRNA-His K14226 tRNA-His; tRNA His D NEF64_00025 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D NEF64_12505 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D NEF64_07530 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D NEF64_08075 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D NEF64_11630 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D NEF64_00385 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D NEF64_04700 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D NEF64_13960 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D NEF64_01460 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D NEF64_12800 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D NEF64_02475 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D NEF64_00005 tRNA-Met K14230 tRNA-Met; tRNA Met D NEF64_07550 tRNA-Met K14230 tRNA-Met; tRNA Met D NEF64_08095 tRNA-Met K14230 tRNA-Met; tRNA Met D NEF64_12485 tRNA-Met K14230 tRNA-Met; tRNA Met D NEF64_13745 tRNA-Met K14230 tRNA-Met; tRNA Met D NEF64_09935 tRNA-Ile K14230 tRNA-Met; tRNA Met D NEF64_17530 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D NEF64_16620 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D NEF64_10325 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D NEF64_07215 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D NEF64_03355 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D NEF64_04300 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D NEF64_07120 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D NEF64_10840 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D NEF64_05970 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D NEF64_17395 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D NEF64_00155 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D NEF64_06575 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D NEF64_04040 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D NEF64_02610 tRNA-Val K14237 tRNA-Val; tRNA Val D NEF64_15430 tRNA-Val K14237 tRNA-Val; tRNA Val D NEF64_13905 tRNA-Val K14237 tRNA-Val; tRNA Val D NEF64_01585 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D NEF64_06425 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D NEF64_14260 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D NEF64_14250 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D NEF64_14265 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D NEF64_14805 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D NEF64_10215 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D NEF64_05065 glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D NEF64_05070 glyS; glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D NEF64_16525 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D NEF64_07980 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D NEF64_07275 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D NEF64_10305 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D NEF64_10045 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D NEF64_07170 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D NEF64_01270 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D NEF64_15340 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D NEF64_01635 lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6] D NEF64_14550 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D NEF64_05175 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D NEF64_00065 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D NEF64_01965 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D NEF64_01970 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D NEF64_07965 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D NEF64_07370 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:saer03060] D NEF64_06710 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D NEF64_06570 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D NEF64_12645 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D NEF64_16630 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D NEF64_16625 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D NEF64_07415 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D NEF64_10395 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D NEF64_07380 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D NEF64_13405 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D NEF64_13585 ffs; signal recognition particle sRNA small type K01983 ffs; SRP RNA D NEF64_13420 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D NEF64_14525 twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA D NEF64_14515 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC D NEF64_15160 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:saer04122] D NEF64_00205 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D NEF64_13605 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D NEF64_13610 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D NEF64_15370 sseA; 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D NEF64_03920 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D NEF64_04770 molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D NEF64_07930 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D NEF64_04765 moaD; molybdopterin converting factor subunit 1 K03636 moaD; sulfur-carrier protein D NEF64_07320 moeB; molybdopterin-synthase adenylyltransferase MoeB K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80] D NEF64_12135 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D NEF64_05665 moaB; molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75] C 03050 Proteasome C 03018 RNA degradation [PATH:saer03018] D NEF64_10495 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D NEF64_17890 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12] D NEF64_13305 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D NEF64_15245 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D NEF64_09750 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D NEF64_16580 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D NEF64_11870 VacB/RNase II family 3'-5' exoribonuclease K12573 rnr; ribonuclease R [EC:3.1.13.1] D NEF64_15995 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D NEF64_01840 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D NEF64_01330 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D NEF64_06380 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-] D NEF64_14930 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D NEF64_17990 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D NEF64_10280 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein D NEF64_10195 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D NEF64_06820 CCA tRNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:saer03030] D NEF64_00170 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D NEF64_01365 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D NEF64_18805 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D NEF64_12605 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D NEF64_13580 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D NEF64_10155 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D NEF64_02240 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D NEF64_06905 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D NEF64_13360 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D NEF64_01520 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D NEF64_18965 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D NEF64_05130 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D NEF64_02560 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D NEF64_01110 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D NEF64_04160 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:saer03410] D NEF64_15880 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D NEF64_03790 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D NEF64_07355 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D NEF64_04020 DNA-3-methyladenine glycosylase 2 family protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D NEF64_11880 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D NEF64_02465 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D NEF64_17655 UdgX family uracil-DNA binding protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D NEF64_01230 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D NEF64_14460 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D NEF64_01110 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D NEF64_05505 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D NEF64_04160 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:saer03420] D NEF64_07945 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D NEF64_15615 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A D NEF64_15105 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B D NEF64_14855 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C D NEF64_13265 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D NEF64_01110 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D NEF64_04160 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03430 Mismatch repair [PATH:saer03430] D NEF64_02655 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D NEF64_12770 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL D NEF64_13265 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D NEF64_02960 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D NEF64_15520 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D NEF64_02325 exonuclease domain-containing protein K10857 exoX; exodeoxyribonuclease X [EC:3.1.11.-] D NEF64_05505 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D NEF64_01520 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D NEF64_18965 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D NEF64_12605 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D NEF64_02240 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D NEF64_13580 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D NEF64_00170 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D NEF64_01365 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D NEF64_18805 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D NEF64_10155 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D NEF64_04160 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03440 Homologous recombination [PATH:saer03440] D NEF64_05505 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D NEF64_01520 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D NEF64_18965 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D NEF64_02250 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF D NEF64_14840 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D NEF64_10050 recR; recombination mediator RecR K06187 recR; recombination protein RecR D NEF64_05695 recA; recombinase RecA K03553 recA; recombination protein RecA D NEF64_01110 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D NEF64_17765 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA D NEF64_17750 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D NEF64_17770 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D NEF64_07955 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D NEF64_12605 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D NEF64_02240 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D NEF64_13580 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D NEF64_00170 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D NEF64_01365 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D NEF64_18805 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D NEF64_10155 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D NEF64_15020 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining [PATH:saer03450] D NEF64_03895 Ku protein K10979 ku; DNA end-binding protein Ku D NEF64_03890 ligD; DNA ligase D K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 [PATH:saer03250] D NEF64_04745 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D NEF64_16270 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:saer02010] D NEF64_11610 sulfate ABC transporter substrate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D NEF64_11615 cysT; sulfate ABC transporter permease subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein D NEF64_11620 cysW; sulfate ABC transporter permease subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein D NEF64_11625 sulfate/molybdate ABC transporter ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D NEF64_11855 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein D NEF64_11850 modB; molybdate ABC transporter permease subunit K02018 modB; molybdate transport system permease protein D NEF64_11845 ATP-binding cassette domain-containing protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D NEF64_09785 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D NEF64_03065 ABC transporter permease/substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein D NEF64_03070 ATP-binding cassette domain-containing protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D NEF64_03975 MlaD family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D NEF64_03965 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D NEF64_03970 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D NEF64_04835 substrate-binding domain-containing protein K02040 pstS; phosphate transport system substrate-binding protein D NEF64_04830 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein D NEF64_04825 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein D NEF64_04820 pstB; phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D NEF64_12930 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein D NEF64_12925 ABC transporter permease K02072 metI; D-methionine transport system permease protein D NEF64_12920 ATP-binding cassette domain-containing protein K02071 metN; D-methionine transport system ATP-binding protein D NEF64_12625 lipoprotein-releasing ABC transporter permease subunit K09808 lolC_E; lipoprotein-releasing system permease protein D NEF64_12620 ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D NEF64_13800 ccmC; heme ABC transporter permease CcmC K02195 ccmC; heme exporter protein C D NEF64_03095 heme exporter protein CcmB K02194 ccmB; heme exporter protein B D NEF64_03090 ccmA; heme ABC exporter ATP-binding protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D NEF64_07055 lptF; LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein D NEF64_02090 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D NEF64_01470 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D NEF64_01855 ABC transporter ATP-binding protein/permease K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter D NEF64_09810 type I secretion system permease/ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D NEF64_09415 type I secretion system permease/ATPase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase D NEF64_12255 ATP-binding cassette domain-containing protein K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC D NEF64_12250 cydD; thiol reductant ABC exporter subunit CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD C 02060 Phosphotransferase system (PTS) [PATH:saer02060] D NEF64_10070 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr D NEF64_11665 nagE; N-acetylglucosamine-specific PTS transporter subunit IIBC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193] D NEF64_10075 PTS sugar transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D NEF64_11660 ptsP; phosphoenolpyruvate--protein phosphotransferase K23993 fruB; multiphosphoryl transfer protein [EC:2.7.3.9 2.7.1.202] D NEF64_17745 ptsP; phosphoenolpyruvate--protein phosphotransferase K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9] D NEF64_01375 PTS sugar transporter subunit IIA K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] C 03070 Bacterial secretion system [PATH:saer03070] D NEF64_13865 gspD; type II secretion system secretin GspD K02453 gspD; general secretion pathway protein D D NEF64_13855 gspF; type II secretion system inner membrane protein GspF K02455 gspF; general secretion pathway protein F D NEF64_13850 gspG; type II secretion system major pseudopilin GspG K02456 gspG; general secretion pathway protein G D NEF64_13840 gspI; type II secretion system minor pseudopilin GspI K02458 gspI; general secretion pathway protein I D NEF64_13860 tadA; Flp pilus assembly complex ATPase component TadA K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D NEF64_16630 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D NEF64_06570 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D NEF64_12645 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D NEF64_06710 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D NEF64_16625 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D NEF64_07415 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D NEF64_10395 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D NEF64_13420 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D NEF64_07380 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D NEF64_13405 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D NEF64_14525 twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA D NEF64_14515 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC D NEF64_18835 TrbC/VirB2 family protein K03197 virB2; type IV secretion system protein VirB2 D NEF64_18840 type IV secretion system protein VirB3 K03198 virB3; type IV secretion system protein VirB3 D NEF64_19060 VirB3 family type IV secretion system protein K03198 virB3; type IV secretion system protein VirB3 D NEF64_19030 TrbG/VirB9 family P-type conjugative transfer protein K03204 virB9; type IV secretion system protein VirB9 D NEF64_19035 VirB8/TrbF family protein K03203 virB8; type IV secretion system protein VirB8 D NEF64_19025 virB10; type IV secretion system protein VirB10 K03195 virB10; type IV secretion system protein VirB10 D NEF64_18845 VirB4 family type IV secretion/conjugal transfer ATPase K03199 virB4; type IV secretion system protein VirB4 [EC:7.4.2.8] D NEF64_19055 VirB4 family type IV secretion/conjugal transfer ATPase K03199 virB4; type IV secretion system protein VirB4 [EC:7.4.2.8] D NEF64_18870 virB11; P-type DNA transfer ATPase VirB11 K03196 virB11; type IV secretion system protein VirB11 [EC:7.4.2.8] D NEF64_19020 virB11; P-type DNA transfer ATPase VirB11 K03196 virB11; type IV secretion system protein VirB11 [EC:7.4.2.8] D NEF64_18465 type IV secretory system conjugative DNA transfer family protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8] D NEF64_18655 type IV secretory system conjugative DNA transfer family protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8] D NEF64_19015 type IV secretory system conjugative DNA transfer family protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8] B B 09132 Signal transduction C 02020 Two-component system [PATH:saer02020] D NEF64_04840 ATP-binding protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D NEF64_04810 phoB; phosphate regulon transcriptional regulator PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D NEF64_10815 alkaline phosphatase D family protein K01113 phoD; alkaline phosphatase D [EC:3.1.3.1] D NEF64_18265 alkaline phosphatase D family protein K01113 phoD; alkaline phosphatase D [EC:3.1.3.1] D NEF64_04835 substrate-binding domain-containing protein K02040 pstS; phosphate transport system substrate-binding protein D NEF64_04400 trypsin-like peptidase domain-containing protein K04771 degP; serine protease Do [EC:3.4.21.107] D NEF64_16470 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107] D NEF64_00500 flagellin FliC K02406 fliC; flagellin D NEF64_18165 flagellin K02406 fliC; flagellin D NEF64_00400 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D NEF64_16840 sensor histidine kinase KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D NEF64_16835 response regulator transcription factor K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D NEF64_16855 kdpA; potassium-transporting ATPase subunit KdpA K01546 kdpA; potassium-transporting ATPase potassium-binding subunit D NEF64_16850 kdpB; potassium-transporting ATPase subunit KdpB K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6] D NEF64_16845 kdpC; potassium-transporting ATPase subunit KdpC K01548 kdpC; potassium-transporting ATPase KdpC subunit D NEF64_09790 response regulator transcription factor K07774 tctD; two-component system, OmpR family, response regulator TctD D NEF64_11830 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9] D NEF64_07365 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D NEF64_10090 sensor histidine kinase K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3] D NEF64_10095 response regulator transcription factor K14981 chvI; two-component system, OmpR family, response regulator ChvI D NEF64_03985 CoA ester lyase K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34] D NEF64_09070 CoA ester lyase K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34] D NEF64_11400 CoA ester lyase K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34] D NEF64_09325 spore coat U domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D NEF64_09345 spore coat U domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D NEF64_04320 spore coat U domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D NEF64_04305 spore coat U domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D NEF64_02270 spore coat U domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D NEF64_02285 spore coat protein U domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D NEF64_09330 spore coat U domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D NEF64_09335 molecular chaperone K07346 fimC; fimbrial chaperone protein D NEF64_09340 fimbria/pilus outer membrane usher protein K07347 fimD; outer membrane usher protein D NEF64_06055 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA D NEF64_06060 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA D NEF64_15075 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D NEF64_05085 type II secretion system F family protein K12511 tadC; tight adherence protein C D NEF64_16510 [protein-PII] uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59] D NEF64_05595 P-II family nitrogen regulator K04751 glnB; nitrogen regulatory protein P-II 1 D NEF64_10260 ATP-binding protein K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D NEF64_10265 ntrC; nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG D NEF64_05590 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D NEF64_10270 ATP-binding protein K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D NEF64_10275 sigma-54 dependent transcriptional regulator K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX D NEF64_11185 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NEF64_15390 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NEF64_15415 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NEF64_16265 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NEF64_15960 ATP-binding protein K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3] D NEF64_15965 sigma-54 dependent transcriptional regulator K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD D NEF64_15955 dicarboxylate/amino acid:cation symporter K11103 dctA; aerobic C4-dicarboxylate transport protein D NEF64_02085 rpoN; RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D NEF64_09520 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D NEF64_01170 globin-coupled sensor protein K03406 mcp; methyl-accepting chemotaxis protein D NEF64_09550 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D NEF64_09525 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D NEF64_09530 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D NEF64_09535 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D NEF64_09540 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D NEF64_13530 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D NEF64_09515 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D NEF64_02155 response regulator K11443 divK; two-component system, cell cycle response regulator DivK D NEF64_10010 response regulator K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3] D NEF64_05290 response regulator transcription factor K13584 ctrA; two-component system, cell cycle response regulator CtrA D NEF64_15435 response regulator K13589 cpdR; two-component system, cell cycle response regulator CpdR D NEF64_07245 PAS domain S-box protein K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3] D NEF64_03555 response regulator K14987 fixJ; two-component system, LuxR family, response regulator FixJ D NEF64_07240 response regulator K14987 fixJ; two-component system, LuxR family, response regulator FixJ D NEF64_00505 sigma 54-interacting transcriptional regulator K10943 flrC; two-component system, response regulator FlrC D NEF64_01785 crotonase/enoyl-CoA hydratase family protein K13816 rpfF; DSF synthase D NEF64_18190 glsA; glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2] D NEF64_04225 ATP-binding protein K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3] D NEF64_04230 response regulator transcription factor K15012 regA; two-component system, response regulator RegA D NEF64_05005 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D NEF64_05010 cytochrome b/b6 K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D NEF64_05015 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D NEF64_01040 c-type cytochrome K08738 CYC; cytochrome c D NEF64_03810 cytochrome c family protein K08738 CYC; cytochrome c D NEF64_12245 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D NEF64_12235 cydX; cytochrome bd-I oxidase subunit CydX K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7] D NEF64_00935 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein D NEF64_13695 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein D NEF64_18565 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein D NEF64_07310 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D NEF64_07305 wecC; UDP-N-acetyl-D-mannosamine dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336] D NEF64_03695 glycoside hydrolase family 5 protein K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D NEF64_04520 glycoside hydrolase family 9 protein K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis [PATH:saer04148] D NEF64_13630 type III PLP-dependent enzyme K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D NEF64_05005 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:saer02024] D NEF64_10280 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein D NEF64_12110 chorismate-binding protein K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D NEF64_12120 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D NEF64_07260 3-deoxy-7-phosphoheptulonate synthase class II K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D NEF64_16835 response regulator transcription factor K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D NEF64_01785 crotonase/enoyl-CoA hydratase family protein K13816 rpfF; DSF synthase D NEF64_11310 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D NEF64_16130 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D NEF64_11820 transcriptional repressor K09823 zur; Fur family transcriptional regulator, zinc uptake regulator D NEF64_01235 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D NEF64_01570 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D NEF64_00305 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system D NEF64_15830 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system D NEF64_16055 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system D NEF64_07415 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D NEF64_06570 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D NEF64_12645 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D NEF64_06710 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D NEF64_16625 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D NEF64_10395 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D NEF64_13420 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D NEF64_07380 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D NEF64_13405 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D NEF64_12935 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis [PATH:saer02030] D NEF64_01170 globin-coupled sensor protein K03406 mcp; methyl-accepting chemotaxis protein D NEF64_09550 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D NEF64_09535 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D NEF64_09525 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D NEF64_09530 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D NEF64_09540 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D NEF64_13530 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D NEF64_09515 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D NEF64_09520 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D NEF64_00520 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D NEF64_00555 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D NEF64_00400 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D NEF64_00395 OmpA family protein K02557 motB; chemotaxis protein MotB C 02040 Flagellar assembly [PATH:saer02040] D NEF64_00510 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE D NEF64_00520 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D NEF64_00530 FliI/YscN family ATPase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D NEF64_00555 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D NEF64_00560 flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ D NEF64_00565 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP D NEF64_00570 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D NEF64_00575 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D NEF64_00490 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D NEF64_00455 flagellar basal body protein K02387 flgB; flagellar basal-body rod protein FlgB D NEF64_00450 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D NEF64_00440 flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE D NEF64_00435 flagellar basal body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF D NEF64_00430 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D NEF64_18150 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D NEF64_00425 flagellar basal body L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH D NEF64_18160 flagellar basal body L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH D NEF64_00420 flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI D NEF64_00500 flagellin FliC K02406 fliC; flagellin D NEF64_18165 flagellin K02406 fliC; flagellin D NEF64_00400 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D NEF64_00395 OmpA family protein K02557 motB; chemotaxis protein MotB D NEF64_13365 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D NEF64_02085 rpoN; RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D NEF64_00505 sigma 54-interacting transcriptional regulator K10943 flrC; two-component system, response regulator FlrC C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D NEF64_13305 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism [PATH:saer04980] D NEF64_00095 cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D NEF64_03035 scpA; methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D NEF64_05225 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D NEF64_05220 homocysteine S-methyltransferase family protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:saer01501] D NEF64_14540 glycoside hydrolase family 3 protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D NEF64_04650 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D NEF64_12045 bla; class A beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6] D NEF64_00295 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D NEF64_16045 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D NEF64_00300 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D NEF64_16050 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D NEF64_00305 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system D NEF64_15830 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system D NEF64_16055 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system D NEF64_15300 transglycosylase domain-containing protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D NEF64_01420 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D NEF64_12790 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:saer01502] D NEF64_14595 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D NEF64_15405 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D NEF64_14630 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D NEF64_14625 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D NEF64_14610 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:saer01503] D NEF64_04400 trypsin-like peptidase domain-containing protein K04771 degP; serine protease Do [EC:3.4.21.107] D NEF64_16470 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107] D NEF64_04745 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D NEF64_16270 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D NEF64_00295 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D NEF64_16045 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D NEF64_00300 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D NEF64_16050 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:saer01000] C 01001 Protein kinases [BR:saer01001] D NEF64_04840 ATP-binding protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D NEF64_16840 sensor histidine kinase KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D NEF64_10090 sensor histidine kinase K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3] D NEF64_10260 ATP-binding protein K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D NEF64_10270 ATP-binding protein K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D NEF64_15960 ATP-binding protein K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3] D NEF64_09535 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D NEF64_10010 response regulator K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3] D NEF64_07245 PAS domain S-box protein K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3] D NEF64_04225 ATP-binding protein K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:saer01009] D NEF64_11990 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D NEF64_14320 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 01002 Peptidases and inhibitors [BR:saer01002] D NEF64_07010 A24 family peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D NEF64_06755 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D NEF64_10470 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D NEF64_00355 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D NEF64_04880 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D NEF64_11650 SIS domain-containing protein K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D NEF64_13650 amidotransferase 1, exosortase A system-associated K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D NEF64_11160 type 1 glutamine amidotransferase K05520 yhbO; deglycase [EC:3.5.1.124] D NEF64_17665 DJ-1/PfpI family protein K18199 inhA; cyclohexyl-isocyanide hydratase [EC:4.2.1.103] D NEF64_00340 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D NEF64_12015 M2 family metallopeptidase K01283 ACE; peptidyl-dipeptidase A [EC:3.4.15.1] D NEF64_06090 M3 family metallopeptidase K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5] D NEF64_05390 M13 family metallopeptidase K07386 pepO; putative endopeptidase [EC:3.4.24.-] D NEF64_10000 M13 family peptidase K07386 pepO; putative endopeptidase [EC:3.4.24.-] D NEF64_10005 M13 family metallopeptidase K07386 pepO; putative endopeptidase [EC:3.4.24.-] D NEF64_14765 peptidase M13 K07386 pepO; putative endopeptidase [EC:3.4.24.-] D NEF64_15560 insulinase family protein K07263 pqqL; zinc protease [EC:3.4.24.-] D NEF64_17640 insulinase family protein K07263 pqqL; zinc protease [EC:3.4.24.-] D NEF64_10150 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D NEF64_12095 leucyl aminopeptidase family protein K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D NEF64_01620 dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D NEF64_02615 M20/M25/M40 family metallo-hydrolase K01295 cpg; glutamate carboxypeptidase [EC:3.4.17.11] D NEF64_10505 hydrolase K01295 cpg; glutamate carboxypeptidase [EC:3.4.17.11] D NEF64_07400 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D NEF64_05805 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D NEF64_00145 aminopeptidase P family protein K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D NEF64_17725 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D NEF64_12535 rseP; RIP metalloprotease RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D NEF64_04400 trypsin-like peptidase domain-containing protein K04771 degP; serine protease Do [EC:3.4.21.107] D NEF64_16470 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107] D NEF64_13280 prolyl oligopeptidase family serine peptidase K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26] D NEF64_12035 S9 family peptidase K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5] D NEF64_00140 S9 family peptidase K01354 ptrB; oligopeptidase B [EC:3.4.21.83] D NEF64_07470 serine hydrolase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D NEF64_10315 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D NEF64_13945 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D NEF64_13915 lon; endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D NEF64_06435 lexA; transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88] D NEF64_17390 umuD; translesion error-prone DNA polymerase V autoproteolytic subunit K03503 umuD; DNA polymerase V [EC:3.4.21.-] D NEF64_15160 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D NEF64_17685 S41 family peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D NEF64_16595 hslV; ATP-dependent protease subunit HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] D NEF64_03260 isoaspartyl peptidase/L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D NEF64_16125 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D NEF64_16765 gamma-glutamyltransferase family protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D NEF64_04105 TldD/PmbA family protein K03592 pmbA; PmbA protein D NEF64_00860 tldD; metalloprotease TldD K03568 tldD; TldD protein C 01003 Glycosyltransferases [BR:saer01003] D NEF64_14830 glycosyltransferase family 2 protein K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83] D NEF64_15485 glycosyltransferase family 1 protein K27597 K27597; 1,2-diacylglycerol 3-alpha-glucosyltransferase/glucuronosyltransferase [EC:2.4.1.337 2.4.1.-] D NEF64_03995 glgA; glycogen synthase GlgA K00703 glgA; starch synthase [EC:2.4.1.21] D NEF64_13570 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D NEF64_15300 transglycosylase domain-containing protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D NEF64_01420 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D NEF64_09435 pelF; GT4 family glycosyltransferase PelF K21011 pelF; polysaccharide biosynthesis protein PelF D NEF64_03635 glycosyltransferase family 4 protein K13657 gumH; alpha-1,3-mannosyltransferase [EC:2.4.1.252] D NEF64_03640 polysaccharide biosynthesis protein GumK K13659 gumK; 2-beta-glucuronyltransferase [EC:2.4.1.264] D NEF64_03385 glycosyltransferase K14596 crtX; zeaxanthin glucosyltransferase [EC:2.4.1.276] D NEF64_15810 trehalose-6-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347] D NEF64_07130 glycosyltransferase K16703 wcaL; colanic acid/amylovoran/stewartan biosynthesis glycosyltransferase WcaL/AmsK/CpsK [EC:2.4.-.-] C 01005 Lipopolysaccharide biosynthesis proteins [BR:saer01005] D NEF64_02790 glycosyltransferase family 2 protein K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:saer01011] D NEF64_02850 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D NEF64_14600 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D NEF64_14605 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D NEF64_14620 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D NEF64_14635 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D NEF64_14595 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D NEF64_15405 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D NEF64_02380 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D NEF64_14625 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D NEF64_14610 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D NEF64_00375 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D NEF64_07375 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase D NEF64_15300 transglycosylase domain-containing protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D NEF64_01420 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D NEF64_12790 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D NEF64_07470 serine hydrolase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D NEF64_10315 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D NEF64_13570 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D NEF64_10320 lytic murein transglycosylase K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29] D NEF64_12690 mltG; endolytic transglycosylase MltG K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D NEF64_01775 septal ring lytic transglycosylase RlpA family protein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29] C 01004 Lipid biosynthesis proteins [BR:saer01004] D NEF64_09900 acyltransferase domain-containing protein K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D NEF64_12715 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D NEF64_01995 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D NEF64_12695 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D NEF64_12705 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D NEF64_17360 glucose 1-dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D NEF64_15720 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D NEF64_12520 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D NEF64_03860 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D NEF64_03215 nitronate monooxygenase K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9] D NEF64_09160 GDSL-type esterase/lipase family protein K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D NEF64_10735 arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D NEF64_06175 acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] D NEF64_09110 acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] D NEF64_05360 acyl-CoA thioesterase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-] D NEF64_11550 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D NEF64_11310 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D NEF64_16130 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D NEF64_14715 fatty acyl-AMP ligase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-] D NEF64_02000 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D NEF64_02375 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] C 01008 Polyketide biosynthesis proteins C 01006 Prenyltransferases [BR:saer01006] D NEF64_15525 polyprenyl synthetase family protein K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] D NEF64_02640 polyprenyl synthetase family protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D NEF64_12550 uppS; polyprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D NEF64_01865 phytoene/squalene synthase family protein K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32] D NEF64_14325 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D NEF64_04100 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D NEF64_03135 heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141] D NEF64_07805 chlG; chlorophyll synthase ChlG K04040 chlG; chlorophyll/bacteriochlorophyll a synthase [EC:2.5.1.62 2.5.1.133] C 01007 Amino acid related enzymes [BR:saer01007] D NEF64_01635 lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6] D NEF64_01585 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D NEF64_06425 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D NEF64_00110 gluQRS; tRNA glutamyl-Q(34) synthetase GluQRS K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D NEF64_07965 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D NEF64_07370 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D NEF64_07275 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D NEF64_14550 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D NEF64_10305 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D NEF64_15340 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D NEF64_07170 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D NEF64_01270 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D NEF64_10215 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D NEF64_00065 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D NEF64_05065 glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D NEF64_05070 glyS; glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D NEF64_07980 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D NEF64_05175 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D NEF64_16525 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D NEF64_14805 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D NEF64_01965 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D NEF64_01970 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D NEF64_02030 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D NEF64_02815 LL-diaminopimelate aminotransferase K14261 alaC; alanine-synthesizing transaminase [EC:2.6.1.-] D NEF64_01495 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D NEF64_02385 hemA; 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37] D NEF64_07065 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D NEF64_16660 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D NEF64_04940 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D NEF64_16670 adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D NEF64_11770 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D NEF64_02025 pabB; aminodeoxychorismate synthase component I K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38] D NEF64_03825 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:saer00194] D NEF64_15030 ATP synthase F1 subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D NEF64_15035 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D NEF64_15040 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D NEF64_15045 atpA; F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D NEF64_15050 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D NEF64_14865 hypothetical protein K02109 ATPF0B; F-type H+-transporting ATPase subunit b D NEF64_14875 F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D NEF64_14880 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:saer03000] D NEF64_15060 methylated-DNA--[protein]-cysteine S-methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] D NEF64_01745 LysR substrate-binding domain-containing protein K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D NEF64_14815 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D NEF64_04785 LysR substrate-binding domain-containing protein K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D NEF64_16745 hydrogen peroxide-inducible genes activator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D NEF64_01070 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D NEF64_08650 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D NEF64_11055 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D NEF64_16730 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D NEF64_01020 LacI family transcriptional regulator K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG D NEF64_07895 LacI family transcriptional regulator K03435 fruR1; LacI family transcriptional regulator, fructose operon transcriptional repressor D NEF64_11675 GntR family transcriptional regulator K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator D NEF64_08365 FCD domain-containing protein K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D NEF64_09595 FadR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D NEF64_05950 FCD domain-containing protein K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D NEF64_04450 TetR/AcrR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D NEF64_13760 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D NEF64_12310 winged helix DNA-binding protein K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin D NEF64_13105 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator D NEF64_16170 transcriptional repressor K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D NEF64_11820 transcriptional repressor K09823 zur; Fur family transcriptional regulator, zinc uptake regulator D NEF64_12230 Crp/Fnr family transcriptional regulator K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D NEF64_09145 metalloregulator ArsR/SmtB family transcription factor K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D NEF64_18360 metalloregulator ArsR/SmtB family transcription factor K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D NEF64_01845 metalloregulator ArsR/SmtB family transcription factor K26993 sdpR; ArsR family transcriptional regulator, repressor of sdpIR and other operons D NEF64_03000 short-chain fatty acyl-CoA regulator family protein K21686 prpR; XRE family transcriptional regulator, fatty acid utilization regulator D NEF64_05190 short-chain fatty acyl-CoA regulator family protein K07110 ramB; XRE family transcriptional regulator, fatty acid utilization regulator D NEF64_04650 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D NEF64_06370 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D NEF64_08600 transcriptional regulator K07726 K07726; putative transcriptional regulator D NEF64_05375 helix-turn-helix transcriptional regulator K07727 K07727; putative transcriptional regulator D NEF64_08860 helix-turn-helix transcriptional regulator K07729 K07729; putative transcriptional regulator D NEF64_16550 helix-turn-helix transcriptional regulator K07729 K07729; putative transcriptional regulator D NEF64_11175 putA; bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D NEF64_17450 BolA family transcriptional regulator K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator D NEF64_00665 ParB N-terminal domain-containing protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D NEF64_01285 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D NEF64_01715 CarD family transcriptional regulator K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription D NEF64_14960 hrcA; heat-inducible transcriptional repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor D NEF64_13435 pspF; phage shock protein operon transcriptional activator K03974 pspF; psp operon transcriptional activator D NEF64_13450 pspC; envelope stress response membrane protein PspC K03973 pspC; phage shock protein C D NEF64_11995 YqgE/AlgH family protein K07735 algH; putative transcriptional regulator D NEF64_08000 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D NEF64_02425 nrdR; transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR C 03021 Transcription machinery [BR:saer03021] D NEF64_06745 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D NEF64_05885 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D NEF64_05880 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D NEF64_00850 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D NEF64_13365 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D NEF64_02400 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D NEF64_03740 RNA polymerase sigma factor K24073 cnrH; RNA polymerase sigma factor CnrH D NEF64_13560 rpoH; RNA polymerase sigma factor RpoH K03089 rpoH; RNA polymerase sigma-32 factor D NEF64_02085 rpoN; RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D NEF64_15205 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA D NEF64_17490 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB D NEF64_06565 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D NEF64_08000 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D NEF64_13340 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D NEF64_09975 greB; transcription elongation factor GreB K04760 greB; transcription elongation factor GreB D NEF64_01330 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:saer03019] D NEF64_01750 CDC48 family AAA ATPase K13525 VCP; transitional endoplasmic reticulum ATPase D NEF64_17890 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12] D NEF64_15155 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D NEF64_06380 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-] D NEF64_11870 VacB/RNase II family 3'-5' exoribonuclease K12573 rnr; ribonuclease R [EC:3.1.13.1] D NEF64_09750 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D NEF64_16580 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D NEF64_15995 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D NEF64_01840 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D NEF64_13305 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D NEF64_15245 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D NEF64_01330 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D NEF64_14930 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D NEF64_17990 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D NEF64_10280 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein D NEF64_10195 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D NEF64_06820 CCA tRNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D NEF64_10495 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D NEF64_10080 rapZ; RNase adapter RapZ K06958 rapZ; RNase adapter protein RapZ D NEF64_15295 hrpB; ATP-dependent helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6] C 03041 Spliceosome C 03011 Ribosome [BR:saer03011] D NEF64_04710 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D NEF64_12570 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D NEF64_06640 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D NEF64_02440 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D NEF64_06695 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D NEF64_12725 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D NEF64_06585 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D NEF64_06680 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D NEF64_11840 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D NEF64_06605 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D NEF64_06740 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D NEF64_06580 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D NEF64_06735 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D NEF64_06675 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D NEF64_15240 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D NEF64_13400 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D NEF64_06655 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D NEF64_12730 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D NEF64_06630 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D NEF64_07360 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D NEF64_07280 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D NEF64_05920 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D NEF64_06625 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D NEF64_06610 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D NEF64_06615 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D NEF64_06670 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D NEF64_06685 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D NEF64_12735 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D NEF64_05905 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D NEF64_05925 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D NEF64_05900 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D NEF64_11835 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D NEF64_06660 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D NEF64_06705 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D NEF64_06645 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D NEF64_06750 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D NEF64_06690 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D NEF64_13380 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D NEF64_01955 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D NEF64_07110 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D NEF64_06635 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D NEF64_06620 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D NEF64_06665 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D NEF64_07105 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D NEF64_02915 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D NEF64_06650 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D NEF64_06700 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D NEF64_12515 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D NEF64_02005 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D NEF64_02150 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D NEF64_07430 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D NEF64_01950 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D NEF64_17610 ykgO; type B 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D NEF64_05055 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25 D NEF64_00010 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D NEF64_07545 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D NEF64_08090 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D NEF64_12490 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D NEF64_00030 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D NEF64_07525 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D NEF64_12510 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D NEF64_08070 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D NEF64_00015 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D NEF64_12495 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D NEF64_08085 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D NEF64_07540 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:saer03009] D NEF64_15155 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D NEF64_01750 CDC48 family AAA ATPase K13525 VCP; transitional endoplasmic reticulum ATPase D NEF64_15150 era; GTPase Era K03595 era; GTPase D NEF64_07085 obgE; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-] D NEF64_08000 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D NEF64_15205 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA D NEF64_17490 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB D NEF64_06565 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D NEF64_10130 rsmA; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D NEF64_01135 methyltransferase domain-containing protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D NEF64_10120 RsmB/NOP family class I SAM-dependent RNA methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D NEF64_13240 rsmD; 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D NEF64_04090 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D NEF64_14650 rsmH; 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D NEF64_14990 rsmI; 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D NEF64_11800 TlyA family RNA methyltransferase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D NEF64_04030 rlmB; 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D NEF64_00845 RlmE family RNA methyltransferase K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] D NEF64_17695 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D NEF64_03100 class I SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D NEF64_04475 rlmJ; 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266] D NEF64_02220 rlmN; 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D NEF64_10035 class I SAM-dependent RNA methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D NEF64_05320 RNA pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D NEF64_18050 RluA family pseudouridine synthase K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D NEF64_13555 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D NEF64_13375 pseudouridine synthase K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20] D NEF64_12080 rimO; 30S ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4] D NEF64_17890 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12] D NEF64_14275 ruvX; Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D NEF64_15995 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D NEF64_07720 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D NEF64_05770 der; ribosome biogenesis GTPase Der K03977 engA; GTPase D NEF64_10285 hflX; GTPase HflX K03665 hflX; GTPase D NEF64_02505 L-threonylcarbamoyladenylate synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D NEF64_02800 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D NEF64_15225 rbfA; 30S ribosome-binding factor RbfA K02834 rbfA; ribosome-binding factor A D NEF64_15200 rimP; ribosome maturation protein RimP K09748 rimP; ribosome maturation factor RimP D NEF64_17700 rsfS; ribosome silencing factor K09710 ybeB; ribosome-associated protein D NEF64_16190 ybeY; rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor D NEF64_01370 raiA; ribosome-associated translation inhibitor RaiA K05808 hpf; ribosome hibernation promoting factor D NEF64_05035 ychF; redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase C 03016 Transfer RNA biogenesis [BR:saer03016] D NEF64_01585 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D NEF64_06425 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D NEF64_05175 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D NEF64_15340 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D NEF64_01270 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D NEF64_10305 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D NEF64_14550 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D NEF64_10215 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D NEF64_14805 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D NEF64_16525 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D NEF64_07980 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D NEF64_07275 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D NEF64_07170 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D NEF64_00065 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D NEF64_01965 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D NEF64_01970 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D NEF64_07965 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D NEF64_07370 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D NEF64_18125 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D NEF64_16245 trmB; tRNA (guanosine(46)-N7)-methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D NEF64_10040 truA; tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D NEF64_15235 truB; tRNA pseudouridine(55) synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D NEF64_00205 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D NEF64_13605 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D NEF64_13610 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D NEF64_02505 L-threonylcarbamoyladenylate synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D NEF64_14325 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D NEF64_01305 mnmE; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D NEF64_01300 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D NEF64_10705 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D NEF64_07425 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D NEF64_13505 rnpB; RNase P RNA component class A K01978 rnpB; M1 RNA D NEF64_14965 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56] D NEF64_02105 ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5] D NEF64_10210 rnd; ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5] D NEF64_01635 lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6] D NEF64_05065 glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D NEF64_05070 glyS; glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D NEF64_00110 gluQRS; tRNA glutamyl-Q(34) synthetase GluQRS K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D NEF64_02925 nucleoside deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D NEF64_08215 nucleoside deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D NEF64_10950 nucleoside deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D NEF64_10255 dusB; tRNA dihydrouridine synthase DusB K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D NEF64_16180 miaB; tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D NEF64_13415 mtaB; tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase MtaB K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5] D NEF64_11935 trmFO; methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74] D NEF64_13385 trmD; tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D NEF64_05000 tRNA (cytidine(34)-2'-O)-methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D NEF64_10065 RNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family D NEF64_05320 RNA pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D NEF64_03920 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D NEF64_16080 iron-sulfur cluster assembly accessory protein K13628 iscA; iron-sulfur cluster assembly protein D NEF64_15540 queA; tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D NEF64_04955 queC; 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D NEF64_04960 queE; 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D NEF64_17865 queF; preQ(1) synthase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D NEF64_02695 queG; tRNA epoxyqueuosine(34) reductase QueG K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6] D NEF64_15550 tgt; tRNA guanosine(34) transglycosylase Tgt K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D NEF64_01155 tsaD; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D NEF64_10435 tsaE; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D NEF64_11870 VacB/RNase II family 3'-5' exoribonuclease K12573 rnr; ribonuclease R [EC:3.1.13.1] D NEF64_15245 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:saer03012] D NEF64_15220 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D NEF64_16520 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D NEF64_04140 ABC-F family ATP-binding cassette domain-containing protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3 D NEF64_12565 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts D NEF64_06595 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D NEF64_06590 fusA; elongation factor G K02355 fusA; elongation factor G D NEF64_00060 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D NEF64_12555 frr; ribosome recycling factor K02838 frr; ribosome recycling factor D NEF64_00055 prmC; peptide chain release factor N(5)-glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D NEF64_05050 pth; aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D NEF64_17510 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D NEF64_06290 efp; elongation factor P K02356 efp; elongation factor P D NEF64_15305 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2 D NEF64_01980 peptide chain release factor 3 K02837 prfC; peptide chain release factor 3 D NEF64_05325 arfB; aminoacyl-tRNA hydrolase K15034 yaeJ; ribosome-associated protein C 03110 Chaperones and folding catalysts [BR:saer03110] D NEF64_15505 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA D NEF64_02990 clpB; ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D NEF64_13940 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D NEF64_16590 hslU; ATP-dependent protease ATPase subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU D NEF64_14930 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D NEF64_15980 Hsp70 family protein K04046 yegD; hypothetical chaperone protein D NEF64_17990 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D NEF64_14925 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D NEF64_04950 Hsp33 family molecular chaperone HslO K04083 hslO; molecular chaperone Hsp33 D NEF64_14955 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE D NEF64_12635 Hsp20 family protein K04080 ibpA; molecular chaperone IbpA D NEF64_17995 groES; co-chaperone GroES K04078 groES; chaperonin GroES D NEF64_04400 trypsin-like peptidase domain-containing protein K04771 degP; serine protease Do [EC:3.4.21.107] D NEF64_16470 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107] D NEF64_17725 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D NEF64_14880 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D NEF64_09335 molecular chaperone K07346 fimC; fimbrial chaperone protein D NEF64_07380 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D NEF64_11680 family 20 glycosylhydrolase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D NEF64_12885 family 20 glycosylhydrolase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D NEF64_04745 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D NEF64_16270 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D NEF64_10410 trxA; thioredoxin TrxA K03671 TXN; thioredoxin D NEF64_01195 tetratricopeptide repeat protein K05838 ybbN; putative thioredoxin D NEF64_14435 grxC; glutaredoxin 3 K03676 grxC; glutaredoxin 3 D NEF64_04645 grxD; Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin C 04131 Membrane trafficking [BR:saer04131] D NEF64_10160 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D NEF64_01750 CDC48 family AAA ATPase K13525 VCP; transitional endoplasmic reticulum ATPase D NEF64_10365 SPFH domain-containing protein K07192 FLOT; flotillin D NEF64_06240 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D NEF64_17595 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D NEF64_17805 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] C 04121 Ubiquitin system C 03051 Proteasome C 03032 DNA replication proteins [BR:saer03032] D NEF64_05130 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D NEF64_13910 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D NEF64_01990 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D NEF64_04705 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D NEF64_07365 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D NEF64_06905 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D NEF64_13360 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D NEF64_01520 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D NEF64_18965 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D NEF64_12605 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D NEF64_02240 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D NEF64_10155 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D NEF64_00170 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D NEF64_01365 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D NEF64_18805 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D NEF64_13580 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D NEF64_02560 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D NEF64_01110 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D NEF64_04160 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D NEF64_11915 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D NEF64_02260 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D NEF64_06810 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D NEF64_04930 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D NEF64_02360 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D NEF64_11165 DNA topoisomerase IB K03168 topA; DNA topoisomerase I [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:saer03036] D NEF64_15155 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D NEF64_10365 SPFH domain-containing protein K07192 FLOT; flotillin D NEF64_13910 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D NEF64_01990 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D NEF64_04705 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D NEF64_07365 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D NEF64_07115 hspQ; heat shock protein HspQ K11940 hspQ; heat shock protein HspQ D NEF64_02135 DNA starvation/stationary phase protection protein K04047 dps; starvation-inducible DNA-binding protein D NEF64_10280 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein D NEF64_13760 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D NEF64_18925 nucleoid-associated protein K06899 ndpA; nucleoid-associated protein D NEF64_03770 AAA family ATPase K03529 smc; chromosome segregation protein D NEF64_14535 segregation/condensation protein A K05896 scpA; segregation and condensation protein A D NEF64_14530 scpB; SMC-Scp complex subunit ScpB K06024 scpB; segregation and condensation protein B D NEF64_14585 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA D NEF64_01470 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D NEF64_01220 DNA translocase FtsK 4TM domain-containing protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D NEF64_14590 cell division protein FtsQ/DivIB K03589 ftsQ; cell division protein FtsQ D NEF64_14615 FtsW/RodA/SpoVE family cell cycle protein K03588 ftsW; cell division protein FtsW D NEF64_14580 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D NEF64_15660 zapE; cell division protein ZapE K06916 zapE; cell division protein ZapE D NEF64_00295 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D NEF64_16045 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D NEF64_12775 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D NEF64_12795 rodA; rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA D NEF64_01290 AAA family ATPase K03496 parA; chromosome partitioning protein D NEF64_02345 division plane positioning ATPase MipZ K03496 parA; chromosome partitioning protein D NEF64_18635 AAA family ATPase K03496 parA; chromosome partitioning protein D NEF64_14305 ParA family protein K03496 parA; chromosome partitioning protein D NEF64_18395 ParA family protein K03496 parA; chromosome partitioning protein D NEF64_18975 ParA family protein K03496 parA; chromosome partitioning protein D NEF64_00665 ParB N-terminal domain-containing protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D NEF64_01285 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D NEF64_06810 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D NEF64_04930 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D NEF64_01300 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D NEF64_11935 trmFO; methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74] D NEF64_15010 tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC D NEF64_06045 tyrosine-type recombinase/integrase K04763 xerD; integrase/recombinase XerD D NEF64_16485 Mrp/NBP35 family ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D NEF64_07410 yihA; ribosome biogenesis GTP-binding protein YihA/YsxC K03978 engB; GTP-binding protein C 03400 DNA repair and recombination proteins [BR:saer03400] D NEF64_01315 methylated-DNA--[protein]-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D NEF64_10485 DNA photolyase family protein K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D NEF64_03790 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D NEF64_15880 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D NEF64_06065 (deoxy)nucleoside triphosphate pyrophosphohydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D NEF64_07330 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D NEF64_15060 methylated-DNA--[protein]-cysteine S-methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] D NEF64_17860 cryptochrome/photolyase family protein K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13] D NEF64_02465 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D NEF64_17655 UdgX family uracil-DNA binding protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D NEF64_04020 DNA-3-methyladenine glycosylase 2 family protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D NEF64_11880 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D NEF64_07355 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D NEF64_01230 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D NEF64_14460 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D NEF64_05505 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D NEF64_04160 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D NEF64_01110 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D NEF64_15615 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A D NEF64_15105 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B D NEF64_14855 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C D NEF64_13265 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D NEF64_05885 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D NEF64_05880 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D NEF64_06745 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D NEF64_00850 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D NEF64_07945 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D NEF64_02655 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D NEF64_12770 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL D NEF64_02960 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D NEF64_15520 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D NEF64_02325 exonuclease domain-containing protein K10857 exoX; exodeoxyribonuclease X [EC:3.1.11.-] D NEF64_12605 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D NEF64_02240 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D NEF64_10155 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D NEF64_00170 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D NEF64_01365 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D NEF64_18805 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D NEF64_13580 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D NEF64_01520 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D NEF64_18965 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D NEF64_05695 recA; recombinase RecA K03553 recA; recombination protein RecA D NEF64_17765 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA D NEF64_17750 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D NEF64_17770 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D NEF64_15020 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D NEF64_06000 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms D NEF64_02250 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF D NEF64_07955 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D NEF64_14840 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D NEF64_10050 recR; recombination mediator RecR K06187 recR; recombination protein RecR D NEF64_04165 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D NEF64_16465 DUF853 domain-containing protein K06915 herA; DNA double-strand break repair helicase HerA and related ATPase D NEF64_03895 Ku protein K10979 ku; DNA end-binding protein Ku D NEF64_03890 ligD; DNA ligase D K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] D NEF64_11915 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D NEF64_02260 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D NEF64_02360 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D NEF64_11165 DNA topoisomerase IB K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D NEF64_13910 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D NEF64_01990 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D NEF64_04705 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D NEF64_01840 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D NEF64_04900 dinB; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D NEF64_17385 Y-family DNA polymerase K03502 umuC; DNA polymerase V D NEF64_17390 umuD; translesion error-prone DNA polymerase V autoproteolytic subunit K03503 umuD; DNA polymerase V [EC:3.4.21.-] D NEF64_06435 lexA; transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88] D NEF64_01185 DNA polymerase Y family protein K14161 imuB; protein ImuB D NEF64_01190 error-prone DNA polymerase K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7] D NEF64_01660 ATP-dependent DNA helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] D NEF64_02065 ligase-associated DNA damage response DEXH box helicase K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] D NEF64_16345 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D NEF64_16415 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] C 03029 Mitochondrial biogenesis [BR:saer03029] D NEF64_05010 cytochrome b/b6 K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D NEF64_15220 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D NEF64_16520 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D NEF64_12565 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts D NEF64_06595 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D NEF64_06590 fusA; elongation factor G K02355 fusA; elongation factor G D NEF64_01700 helicase K17675 SUPV3L1; ATP-dependent RNA helicase SUPV3L1/SUV3 [EC:5.6.2.6] D NEF64_15150 era; GTPase Era K03595 era; GTPase D NEF64_07965 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D NEF64_01270 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D NEF64_10215 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D NEF64_14550 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D NEF64_14260 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D NEF64_14250 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D NEF64_14265 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D NEF64_14180 hypothetical protein K17680 PEO1; twinkle protein [EC:5.6.2.3] D NEF64_01520 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D NEF64_18965 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D NEF64_12530 bamA; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family D NEF64_14930 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D NEF64_14955 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE D NEF64_17990 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D NEF64_17995 groES; co-chaperone GroES K04078 groES; chaperonin GroES D NEF64_14925 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D NEF64_00205 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D NEF64_13605 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D NEF64_13610 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D NEF64_04645 grxD; Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin D NEF64_16485 Mrp/NBP35 family ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D NEF64_03135 heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141] D NEF64_03125 cytochrome c oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11 D NEF64_11830 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9] D NEF64_07415 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D NEF64_04220 SURF1 family protein K14998 SURF1; surfeit locus 1 family protein D NEF64_01405 SCO family protein K07152 SCO1; protein SCO1 B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:saer02000] D NEF64_01855 ABC transporter ATP-binding protein/permease K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter D NEF64_11200 ABC transporter transmembrane domain-containing protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D NEF64_09810 type I secretion system permease/ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D NEF64_09415 type I secretion system permease/ATPase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase D NEF64_12255 ATP-binding cassette domain-containing protein K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC D NEF64_12250 cydD; thiol reductant ABC exporter subunit CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD D NEF64_17950 ABC-F family ATP-binding cassette domain-containing protein K15738 uup; ABC transport system ATP-binding/permease protein D NEF64_11610 sulfate ABC transporter substrate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D NEF64_11615 cysT; sulfate ABC transporter permease subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein D NEF64_11620 cysW; sulfate ABC transporter permease subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein D NEF64_11625 sulfate/molybdate ABC transporter ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D NEF64_11855 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein D NEF64_11850 modB; molybdate ABC transporter permease subunit K02018 modB; molybdate transport system permease protein D NEF64_11845 ATP-binding cassette domain-containing protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D NEF64_09785 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D NEF64_03065 ABC transporter permease/substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein D NEF64_03070 ATP-binding cassette domain-containing protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D NEF64_03975 MlaD family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D NEF64_03965 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D NEF64_03970 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D NEF64_03980 ABC-type transport auxiliary lipoprotein family protein K18480 linN; cholesterol transport system auxiliary component D NEF64_08265 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein D NEF64_08260 carbohydrate ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein D NEF64_04835 substrate-binding domain-containing protein K02040 pstS; phosphate transport system substrate-binding protein D NEF64_04830 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein D NEF64_04825 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein D NEF64_04820 pstB; phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D NEF64_12930 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein D NEF64_12925 ABC transporter permease K02072 metI; D-methionine transport system permease protein D NEF64_12920 ATP-binding cassette domain-containing protein K02071 metN; D-methionine transport system ATP-binding protein D NEF64_11380 iron ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein D NEF64_11375 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D NEF64_07055 lptF; LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein D NEF64_02090 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D NEF64_12625 lipoprotein-releasing ABC transporter permease subunit K09808 lolC_E; lipoprotein-releasing system permease protein D NEF64_12620 ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D NEF64_13800 ccmC; heme ABC transporter permease CcmC K02195 ccmC; heme exporter protein C D NEF64_03095 heme exporter protein CcmB K02194 ccmB; heme exporter protein B D NEF64_03090 ccmA; heme ABC exporter ATP-binding protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D NEF64_01470 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D NEF64_00695 DUF3526 domain-containing protein K01992 ABC-2.P; ABC-2 type transport system permease protein D NEF64_00700 DUF3526 domain-containing protein K01992 ABC-2.P; ABC-2 type transport system permease protein D NEF64_04915 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D NEF64_17910 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D NEF64_00690 ATP-binding cassette domain-containing protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D NEF64_00870 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D NEF64_02690 ATP-binding cassette domain-containing protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D NEF64_05380 ATP-binding cassette domain-containing protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D NEF64_17905 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D NEF64_10725 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein D NEF64_11600 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein D NEF64_15780 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein D NEF64_08950 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D NEF64_10730 ATP-binding cassette domain-containing protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D NEF64_11595 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D NEF64_15785 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D NEF64_16100 sufC; Fe-S cluster assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein D NEF64_17830 bile acid:sodium symporter K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7 D NEF64_18000 MATE family efflux transporter K26939 norM; MATE family, multidrug efflux pump D NEF64_07175 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump D NEF64_10890 sugar porter family MFS transporter K08139 HXT; MFS transporter, SP family, sugar:H+ symporter D NEF64_05530 sugar MFS transporter K02429 fucP; MFS transporter, FHS family, L-fucose permease D NEF64_09665 fucP; L-fucose:H+ symporter permease K02429 fucP; MFS transporter, FHS family, L-fucose permease D NEF64_12295 sugar MFS transporter K02429 fucP; MFS transporter, FHS family, L-fucose permease D NEF64_06095 MFS transporter K03761 kgtP; MFS transporter, MHS family, alpha-ketoglutarate permease D NEF64_08705 MFS transporter K03535 gudP; MFS transporter, ACS family, glucarate transporter D NEF64_08630 MFS transporter K08191 exuT; MFS transporter, ACS family, aldohexuronate transporter D NEF64_10905 MFS transporter K08191 exuT; MFS transporter, ACS family, aldohexuronate transporter D NEF64_12980 MFS transporter K08191 exuT; MFS transporter, ACS family, aldohexuronate transporter D NEF64_16450 multidrug effflux MFS transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D NEF64_12350 MFS transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein D NEF64_18210 DHA2 family efflux MFS transporter permease subunit K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein D NEF64_13285 MFS transporter K08169 yebQ; MFS transporter, DHA2 family, multidrug resistance protein D NEF64_01625 MFS transporter K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein D NEF64_09095 MFS transporter K08369 ydjE; MFS transporter, putative metabolite:H+ symporter D NEF64_00775 MFS transporter K08369 ydjE; MFS transporter, putative metabolite:H+ symporter D NEF64_08385 MFS transporter K08369 ydjE; MFS transporter, putative metabolite:H+ symporter D NEF64_17745 ptsP; phosphoenolpyruvate--protein phosphotransferase K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9] D NEF64_10070 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr D NEF64_11660 ptsP; phosphoenolpyruvate--protein phosphotransferase K23993 fruB; multiphosphoryl transfer protein [EC:2.7.3.9 2.7.1.202] D NEF64_11665 nagE; N-acetylglucosamine-specific PTS transporter subunit IIBC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193] D NEF64_10075 PTS sugar transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D NEF64_01375 PTS sugar transporter subunit IIA K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] D NEF64_05485 potassium channel family protein K10716 kch; voltage-gated potassium channel D NEF64_01825 ammonium transporter K03320 amt; ammonium transporter, Amt family D NEF64_00350 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D NEF64_05705 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D NEF64_07405 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D NEF64_11290 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D NEF64_14775 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D NEF64_15465 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D NEF64_17455 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D NEF64_11725 formate/nitrite transporter family protein K02598 nirC; nitrite transporter D NEF64_15265 mscL; large conductance mechanosensitive channel protein MscL K03282 mscL; large conductance mechanosensitive channel D NEF64_03055 DUF3772 domain-containing protein K05802 mscK; potassium-dependent mechanosensitive channel D NEF64_01735 mgtE; magnesium transporter K06213 mgtE; magnesium transporter D NEF64_00400 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D NEF64_00395 OmpA family protein K02557 motB; chemotaxis protein MotB D NEF64_06860 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB D NEF64_06865 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD D NEF64_06870 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD D NEF64_03230 tolQ; protein TolQ K03562 tolQ; biopolymer transport protein TolQ D NEF64_03235 tolR; protein TolR K03560 tolR; biopolymer transport protein TolR D NEF64_18045 crcB; fluoride efflux transporter CrcB K06199 crcB; fluoride exporter D NEF64_02575 hypothetical protein K08994 yneE; ion channel-forming bestrophin family protein D NEF64_02935 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D NEF64_09780 OprO/OprP family phosphate-selective porin K07221 oprO_P; phosphate-selective porin OprO and OprP D NEF64_03330 OmpA family protein K03286 TC.OOP; OmpA-OmpF porin, OOP family D NEF64_11330 outer membrane protein transport protein K06076 fadL; long-chain fatty acid transport protein D NEF64_09340 fimbria/pilus outer membrane usher protein K07347 fimD; outer membrane usher protein D NEF64_17425 TonB-dependent receptor K16090 fiu; catecholate siderophore receptor D NEF64_00680 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D NEF64_03480 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D NEF64_04355 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D NEF64_04585 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D NEF64_07515 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D NEF64_07595 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D NEF64_08785 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D NEF64_12195 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D NEF64_12630 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D NEF64_13070 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D NEF64_16325 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D NEF64_17220 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D NEF64_05945 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D NEF64_07695 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D NEF64_07850 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D NEF64_09590 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D NEF64_11000 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D NEF64_11530 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D NEF64_12400 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D NEF64_16315 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D NEF64_18205 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D NEF64_18315 TolC family protein K15725 czcC; outer membrane protein, heavy metal efflux system D NEF64_00305 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system D NEF64_15830 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system D NEF64_16055 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system D NEF64_15795 efflux transporter outer membrane subunit K18904 nodT; outer membrane protein, multidrug efflux system D NEF64_00935 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein D NEF64_13695 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein D NEF64_18565 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein D NEF64_17200 carbohydrate porin K07267 oprB; porin D NEF64_12530 bamA; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family D NEF64_04170 outer membrane protein assembly factor BamD K05807 bamD; outer membrane protein assembly factor BamD D NEF64_02095 LptA/OstA family protein K09774 lptA; lipopolysaccharide export system protein LptA D NEF64_16195 hemolysin family protein K06189 corC; hemolysin (HlyC) family protein D NEF64_07860 MFS transporter K16211 malY; maltose/moltooligosaccharide transporter D NEF64_11260 MFS transporter K16211 malY; maltose/moltooligosaccharide transporter D NEF64_02650 cation diffusion facilitator family transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein D NEF64_03905 cation diffusion facilitator family transporter K13283 fieF; ferrous-iron efflux pump FieF D NEF64_18330 transporter K07238 TC.ZIP; zinc transporter, ZIP family D NEF64_18325 CusA/CzcA family heavy metal efflux RND transporter K15726 czcA; heavy metal efflux system protein D NEF64_00300 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D NEF64_16050 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D NEF64_14860 SMR family transporter K11741 sugE; quaternary ammonium compound-resistance protein SugE D NEF64_18345 YnfA family protein K09771 TC.SMR3; small multidrug resistance family-3 protein D NEF64_18725 YnfA family protein K09771 TC.SMR3; small multidrug resistance family-3 protein D NEF64_08335 gluconate:H+ symporter K06155 gntT; Gnt-I system high-affinity gluconate transporter D NEF64_05955 GntP family permease K03299 TC.GNTP; gluconate:H+ symporter, GntP family D NEF64_12870 GntP family permease K03299 TC.GNTP; gluconate:H+ symporter, GntP family D NEF64_08355 L-lactate permease K03303 lutP; lactate permease D NEF64_05495 BCCT family transporter K02168 betT; choline/glycine/proline betaine transport protein D NEF64_13935 ionic transporter y4hA K07300 chaA; Ca2+:H+ antiporter D NEF64_08210 sodium:calcium antiporter K07301 yrbG; cation:H+ antiporter D NEF64_15955 dicarboxylate/amino acid:cation symporter K11103 dctA; aerobic C4-dicarboxylate transport protein D NEF64_09195 Na+/H+ antiporter K24163 nhaK; monovalent cation/hydrogen antiporter D NEF64_12210 Na+/H+ antiporter K24163 nhaK; monovalent cation/hydrogen antiporter D NEF64_17005 cation:proton antiporter K24160 NHA1; sodium/hydrogen antiporter D NEF64_06015 cation:proton antiporter K11747 kefB; glutathione-regulated potassium-efflux system protein KefB D NEF64_12595 cation:proton antiporter K03455 KEA1_2_3; K+:H+ antiporter D NEF64_05230 cation:proton antiporter K26731 CHX; K+:H+ antiporter D NEF64_04390 chloride channel protein K03281 clcA; chloride channel protein, CIC family D NEF64_18445 voltage-gated chloride channel family protein K03281 clcA; chloride channel protein, CIC family D NEF64_06445 HoxN/HupN/NixA family nickel/cobalt transporter K07241 hoxN; nickel/cobalt transporter (NiCoT) family protein D NEF64_11925 SulP family inorganic anion transporter K03321 TC.SULP; sulfate permease, SulP family D NEF64_04015 Nramp family divalent metal transporter K03322 mntH; manganese transport protein D NEF64_01090 arsenic transporter K03893 arsB; arsenical pump membrane protein D NEF64_09135 arsenic transporter K03893 arsB; arsenical pump membrane protein D NEF64_18350 arsenic transporter K03893 arsB; arsenical pump membrane protein D NEF64_18235 monovalent cation/H+ antiporter subunit A K05559 phaA; multicomponent K+:H+ antiporter subunit A D NEF64_18240 Na+/H+ antiporter subunit C K05560 phaC; multicomponent K+:H+ antiporter subunit C D NEF64_18245 monovalent cation/H+ antiporter subunit D K05561 phaD; multicomponent K+:H+ antiporter subunit D D NEF64_18250 Na+/H+ antiporter subunit E K05562 phaE; multicomponent K+:H+ antiporter subunit E D NEF64_18255 K+/H+ antiporter subunit F K05563 phaF; multicomponent K+:H+ antiporter subunit F D NEF64_18260 Na+/H+ antiporter subunit G K05564 phaG; multicomponent K+:H+ antiporter subunit G D NEF64_07375 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase D NEF64_02050 potassium transporter Kup K03549 kup; KUP system potassium uptake protein D NEF64_13755 potassium transporter Kup K03549 kup; KUP system potassium uptake protein D NEF64_06980 LysE family translocator K05834 rhtB; homoserine/homoserine lactone efflux protein D NEF64_06775 queuosine precursor transporter K09125 yhhQ; queuosine precursor transporter D NEF64_07715 VIT family protein K22736 VIT; vacuolar iron transporter family protein D NEF64_14615 FtsW/RodA/SpoVE family cell cycle protein K03588 ftsW; cell division protein FtsW D NEF64_03250 pal; peptidoglycan-associated lipoprotein Pal K03640 pal; peptidoglycan-associated lipoprotein D NEF64_03245 tolB; Tol-Pal system beta propeller repeat protein TolB K03641 tolB; TolB protein D NEF64_17500 sodium-translocating pyrophosphatase K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1] D NEF64_09870 mdcA; malonate decarboxylase subunit alpha K13929 mdcA; malonate decarboxylase alpha subunit [EC:2.3.1.187] D NEF64_09875 mdcC; malonate decarboxylase acyl carrier protein K13931 mdcC; malonate decarboxylase delta subunit D NEF64_18215 HlyD family efflux transporter periplasmic adaptor subunit K03543 emrA; membrane fusion protein, multidrug efflux system D NEF64_18320 efflux RND transporter periplasmic adaptor subunit K15727 czcB; membrane fusion protein, heavy metal efflux system D NEF64_09805 HlyD family type I secretion periplasmic adaptor subunit K12542 lapC; membrane fusion protein, adhesin transport system D NEF64_00295 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D NEF64_16045 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D NEF64_07460 L,D-transpeptidase family protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family D NEF64_03725 pnuC; nicotinamide riboside transporter PnuC K03811 pnuC; nicotinamide mononucleotide transporter D NEF64_01530 ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A D NEF64_01525 ferrous iron transporter B K04759 feoB; ferrous iron transport protein B D NEF64_07760 tryptophan-rich sensory protein K05770 TSPO; translocator protein D NEF64_07820 tryptophan-rich sensory protein K05770 TSPO; translocator protein D NEF64_14510 entericidin A/B family lipoprotein K16348 ecnB; entericidin B D NEF64_13790 heme lyase CcmF/NrfE family subunit K02198 ccmF; cytochrome c-type biogenesis protein CcmF C 02044 Secretion system [BR:saer02044] D NEF64_09415 type I secretion system permease/ATPase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase D NEF64_09810 type I secretion system permease/ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D NEF64_09805 HlyD family type I secretion periplasmic adaptor subunit K12542 lapC; membrane fusion protein, adhesin transport system D NEF64_13675 AAA family ATPase K02450 gspA; general secretion pathway protein A D NEF64_13865 gspD; type II secretion system secretin GspD K02453 gspD; general secretion pathway protein D D NEF64_13860 tadA; Flp pilus assembly complex ATPase component TadA K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D NEF64_13855 gspF; type II secretion system inner membrane protein GspF K02455 gspF; general secretion pathway protein F D NEF64_13850 gspG; type II secretion system major pseudopilin GspG K02456 gspG; general secretion pathway protein G D NEF64_13840 gspI; type II secretion system minor pseudopilin GspI K02458 gspI; general secretion pathway protein I D NEF64_07010 A24 family peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D NEF64_15075 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D NEF64_05085 type II secretion system F family protein K12511 tadC; tight adherence protein C D NEF64_06055 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA D NEF64_06060 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA D NEF64_02750 YggT family protein K02221 yggT; YggT family protein D NEF64_00490 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D NEF64_00530 FliI/YscN family ATPase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D NEF64_00555 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D NEF64_00560 flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ D NEF64_00565 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP D NEF64_00570 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D NEF64_00575 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D NEF64_18835 TrbC/VirB2 family protein K03197 virB2; type IV secretion system protein VirB2 D NEF64_18840 type IV secretion system protein VirB3 K03198 virB3; type IV secretion system protein VirB3 D NEF64_19060 VirB3 family type IV secretion system protein K03198 virB3; type IV secretion system protein VirB3 D NEF64_18845 VirB4 family type IV secretion/conjugal transfer ATPase K03199 virB4; type IV secretion system protein VirB4 [EC:7.4.2.8] D NEF64_19055 VirB4 family type IV secretion/conjugal transfer ATPase K03199 virB4; type IV secretion system protein VirB4 [EC:7.4.2.8] D NEF64_19035 VirB8/TrbF family protein K03203 virB8; type IV secretion system protein VirB8 D NEF64_19030 TrbG/VirB9 family P-type conjugative transfer protein K03204 virB9; type IV secretion system protein VirB9 D NEF64_19025 virB10; type IV secretion system protein VirB10 K03195 virB10; type IV secretion system protein VirB10 D NEF64_18870 virB11; P-type DNA transfer ATPase VirB11 K03196 virB11; type IV secretion system protein VirB11 [EC:7.4.2.8] D NEF64_19020 virB11; P-type DNA transfer ATPase VirB11 K03196 virB11; type IV secretion system protein VirB11 [EC:7.4.2.8] D NEF64_18465 type IV secretory system conjugative DNA transfer family protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8] D NEF64_18655 type IV secretory system conjugative DNA transfer family protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8] D NEF64_19015 type IV secretory system conjugative DNA transfer family protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8] D NEF64_09335 molecular chaperone K07346 fimC; fimbrial chaperone protein D NEF64_09340 fimbria/pilus outer membrane usher protein K07347 fimD; outer membrane usher protein D NEF64_09325 spore coat U domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D NEF64_09345 spore coat U domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D NEF64_04320 spore coat U domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D NEF64_04305 spore coat U domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D NEF64_02270 spore coat U domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D NEF64_02285 spore coat protein U domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D NEF64_09330 spore coat U domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D NEF64_10395 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D NEF64_07380 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D NEF64_16630 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D NEF64_06570 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D NEF64_12645 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D NEF64_06710 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D NEF64_13405 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D NEF64_13420 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D NEF64_16625 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D NEF64_07415 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D NEF64_14525 twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA D NEF64_14515 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC C 02042 Bacterial toxins [BR:saer02042] D NEF64_02935 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D NEF64_12935 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3] D NEF64_00275 beta-N-acetylglucosaminidase domain-containing protein K01197 hya; hyaluronoglucosaminidase [EC:3.2.1.35] C 02022 Two-component system [BR:saer02022] D NEF64_04840 ATP-binding protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D NEF64_04810 phoB; phosphate regulon transcriptional regulator PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D NEF64_16840 sensor histidine kinase KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D NEF64_16835 response regulator transcription factor K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D NEF64_09790 response regulator transcription factor K07774 tctD; two-component system, OmpR family, response regulator TctD D NEF64_10090 sensor histidine kinase K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3] D NEF64_10095 response regulator transcription factor K14981 chvI; two-component system, OmpR family, response regulator ChvI D NEF64_04405 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator D NEF64_06105 response regulator K02483 K02483; two-component system, OmpR family, response regulator D NEF64_06720 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator D NEF64_08435 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator D NEF64_08740 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator D NEF64_10970 response regulator K02483 K02483; two-component system, OmpR family, response regulator D NEF64_10975 response regulator K02483 K02483; two-component system, OmpR family, response regulator D NEF64_17940 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator D NEF64_11500 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator D NEF64_04145 LytTR family DNA-binding domain-containing protein K02477 K02477; two-component system, LytTR family, response regulator D NEF64_10260 ATP-binding protein K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D NEF64_10265 ntrC; nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG D NEF64_10270 ATP-binding protein K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D NEF64_10275 sigma-54 dependent transcriptional regulator K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX D NEF64_15960 ATP-binding protein K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3] D NEF64_15965 sigma-54 dependent transcriptional regulator K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD D NEF64_17970 prsR; PEP-CTERM-box response regulator transcription factor K02481 flgR; two-component system, NtrC family, response regulator D NEF64_09535 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D NEF64_09540 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D NEF64_13530 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D NEF64_09515 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D NEF64_02155 response regulator K11443 divK; two-component system, cell cycle response regulator DivK D NEF64_10010 response regulator K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3] D NEF64_05290 response regulator transcription factor K13584 ctrA; two-component system, cell cycle response regulator CtrA D NEF64_15435 response regulator K13589 cpdR; two-component system, cell cycle response regulator CpdR D NEF64_07245 PAS domain S-box protein K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3] D NEF64_03555 response regulator K14987 fixJ; two-component system, LuxR family, response regulator FixJ D NEF64_07240 response regulator K14987 fixJ; two-component system, LuxR family, response regulator FixJ D NEF64_00505 sigma 54-interacting transcriptional regulator K10943 flrC; two-component system, response regulator FlrC D NEF64_04225 ATP-binding protein K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3] D NEF64_04230 response regulator transcription factor K15012 regA; two-component system, response regulator RegA C 02035 Bacterial motility proteins [BR:saer02035] D NEF64_09535 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D NEF64_09525 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D NEF64_09530 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D NEF64_09520 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D NEF64_09515 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D NEF64_09540 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D NEF64_13530 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D NEF64_01170 globin-coupled sensor protein K03406 mcp; methyl-accepting chemotaxis protein D NEF64_09550 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D NEF64_00530 FliI/YscN family ATPase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D NEF64_00560 flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ D NEF64_00565 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP D NEF64_00570 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D NEF64_00575 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D NEF64_00490 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D NEF64_00520 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D NEF64_00555 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D NEF64_00420 flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI D NEF64_00425 flagellar basal body L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH D NEF64_18160 flagellar basal body L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH D NEF64_00510 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE D NEF64_00455 flagellar basal body protein K02387 flgB; flagellar basal-body rod protein FlgB D NEF64_00450 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D NEF64_00435 flagellar basal body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF D NEF64_00430 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D NEF64_18150 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D NEF64_00440 flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE D NEF64_00500 flagellin FliC K02406 fliC; flagellin D NEF64_18165 flagellin K02406 fliC; flagellin D NEF64_00400 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D NEF64_00395 OmpA family protein K02557 motB; chemotaxis protein MotB D NEF64_00505 sigma 54-interacting transcriptional regulator K10943 flrC; two-component system, response regulator FlrC D NEF64_07010 A24 family peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D NEF64_06055 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA D NEF64_06060 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA D NEF64_15075 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D NEF64_09335 molecular chaperone K07346 fimC; fimbrial chaperone protein D NEF64_09340 fimbria/pilus outer membrane usher protein K07347 fimD; outer membrane usher protein D NEF64_09325 spore coat U domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D NEF64_09345 spore coat U domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D NEF64_04320 spore coat U domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D NEF64_04305 spore coat U domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D NEF64_02270 spore coat U domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D NEF64_02285 spore coat protein U domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D NEF64_09330 spore coat U domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:saer04812] D NEF64_12775 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D NEF64_14580 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D NEF64_14585 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA D NEF64_01290 AAA family ATPase K03496 parA; chromosome partitioning protein D NEF64_02345 division plane positioning ATPase MipZ K03496 parA; chromosome partitioning protein D NEF64_18635 AAA family ATPase K03496 parA; chromosome partitioning protein D NEF64_14305 ParA family protein K03496 parA; chromosome partitioning protein D NEF64_18395 ParA family protein K03496 parA; chromosome partitioning protein D NEF64_18975 ParA family protein K03496 parA; chromosome partitioning protein D NEF64_00665 ParB N-terminal domain-containing protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D NEF64_01285 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:saer04147] D NEF64_13305 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D NEF64_06240 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D NEF64_06250 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D NEF64_17805 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D NEF64_04745 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D NEF64_16270 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D NEF64_01620 dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D NEF64_10365 SPFH domain-containing protein K07192 FLOT; flotillin D NEF64_17990 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D NEF64_14930 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D NEF64_15165 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D NEF64_12035 S9 family peptidase K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5] D NEF64_10115 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D NEF64_06595 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D NEF64_01750 CDC48 family AAA ATPase K13525 VCP; transitional endoplasmic reticulum ATPase D NEF64_18125 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D NEF64_17830 bile acid:sodium symporter K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7 D NEF64_11310 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D NEF64_16130 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D NEF64_11185 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NEF64_15390 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NEF64_15415 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NEF64_16265 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NEF64_12015 M2 family metallopeptidase K01283 ACE; peptidyl-dipeptidase A [EC:3.4.15.1] D NEF64_11990 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D NEF64_06715 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D NEF64_00615 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D NEF64_02185 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D NEF64_16655 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D NEF64_05415 alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51] D NEF64_07685 alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51] D NEF64_09300 alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51] D NEF64_11705 alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51] D NEF64_04005 glgB; 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D NEF64_04185 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30] D NEF64_05590 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D NEF64_07185 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D NEF64_11435 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D NEF64_03080 4a-hydroxytetrahydrobiopterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D NEF64_03830 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D NEF64_01120 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D NEF64_05365 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D NEF64_11295 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D NEF64_15630 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D NEF64_01610 electron transfer flavoprotein subunit alpha/FixB family protein K03522 fixB; electron transfer flavoprotein alpha subunit D NEF64_05295 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D NEF64_12665 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D NEF64_12100 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D NEF64_17595 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] C 02048 Prokaryotic defense system [BR:saer02048] D NEF64_02565 site-specific DNA-methyltransferase K13581 ccrM; modification methylase [EC:2.1.1.72] D NEF64_19100 N-6 DNA methylase K07317 K07317; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D NEF64_16920 type II toxin-antitoxin system YhaV family toxin K19155 yhaV; toxin YhaV [EC:3.1.-.-] D NEF64_16925 type II toxin-antitoxin system PrlF family antitoxin K19156 prlF; antitoxin PrlF D NEF64_13450 pspC; envelope stress response membrane protein PspC K03973 pspC; phage shock protein C D NEF64_14580 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D NEF64_12775 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D NEF64_06810 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D NEF64_04930 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D NEF64_01585 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D NEF64_06425 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D NEF64_07950 succinate dehydrogenase assembly factor 2 K09159 cptB; antitoxin CptB D NEF64_00205 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D NEF64_13605 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D NEF64_13610 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules [BR:saer04090] D NEF64_12035 S9 family peptidase K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5] D NEF64_12015 M2 family metallopeptidase K01283 ACE; peptidyl-dipeptidase A [EC:3.4.15.1] C 01504 Antimicrobial resistance genes [BR:saer01504] D NEF64_04650 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D NEF64_12045 bla; class A beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6] D NEF64_00295 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D NEF64_16045 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D NEF64_00300 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D NEF64_16050 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D NEF64_00305 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system D NEF64_15830 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system D NEF64_16055 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins [BR:saer00536] D NEF64_00275 beta-N-acetylglucosaminidase domain-containing protein K01197 hya; hyaluronoglucosaminidase [EC:3.2.1.35] C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:saer00537] D NEF64_09390 treF; alpha,alpha-trehalase TreF K01194 TREH; alpha,alpha-trehalase [EC:3.2.1.28] D NEF64_01620 dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D NEF64_00275 beta-N-acetylglucosaminidase domain-containing protein K01197 hya; hyaluronoglucosaminidase [EC:3.2.1.35] C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:saer03100] D NEF64_00020 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D NEF64_07535 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D NEF64_08080 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D NEF64_12500 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D NEF64_10350 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D NEF64_04735 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D NEF64_15885 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D NEF64_06770 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D NEF64_07205 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D NEF64_07210 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D NEF64_14400 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D NEF64_07920 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D NEF64_06210 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D NEF64_06215 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D NEF64_07140 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D NEF64_00835 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D NEF64_11765 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D NEF64_07255 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D NEF64_05500 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D NEF64_01175 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D NEF64_04075 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D NEF64_05855 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D NEF64_13810 tRNA-His K14226 tRNA-His; tRNA His D NEF64_00025 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D NEF64_12505 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D NEF64_07530 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D NEF64_08075 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D NEF64_11630 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D NEF64_00385 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D NEF64_04700 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D NEF64_13960 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D NEF64_01460 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D NEF64_12800 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D NEF64_02475 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D NEF64_00005 tRNA-Met K14230 tRNA-Met; tRNA Met D NEF64_07550 tRNA-Met K14230 tRNA-Met; tRNA Met D NEF64_08095 tRNA-Met K14230 tRNA-Met; tRNA Met D NEF64_12485 tRNA-Met K14230 tRNA-Met; tRNA Met D NEF64_13745 tRNA-Met K14230 tRNA-Met; tRNA Met D NEF64_09935 tRNA-Ile K14230 tRNA-Met; tRNA Met D NEF64_17530 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D NEF64_16620 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D NEF64_10325 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D NEF64_07215 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D NEF64_03355 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D NEF64_04300 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D NEF64_07120 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D NEF64_10840 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D NEF64_05970 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D NEF64_17395 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D NEF64_00155 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D NEF64_06575 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D NEF64_04040 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D NEF64_02610 tRNA-Val K14237 tRNA-Val; tRNA Val D NEF64_15430 tRNA-Val K14237 tRNA-Val; tRNA Val D NEF64_13905 tRNA-Val K14237 tRNA-Val; tRNA Val D NEF64_00030 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D NEF64_07525 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D NEF64_12510 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D NEF64_08070 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D NEF64_00015 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D NEF64_12495 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D NEF64_08085 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D NEF64_07540 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D NEF64_00010 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D NEF64_07545 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D NEF64_08090 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D NEF64_12490 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D NEF64_13585 ffs; signal recognition particle sRNA small type K01983 ffs; SRP RNA D NEF64_13505 rnpB; RNase P RNA component class A K01978 rnpB; M1 RNA D NEF64_15255 ssrA; transfer-messenger RNA K15035 ssrA; transfer-messenger RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D NEF64_04180 glycerol-3-phosphate dehydrogenase K21054 eryB; D-erythritol 1-phosphate dehydrogenase [EC:1.1.1.402] D NEF64_12170 aldo/keto reductase K26057 smoB; 6-dehydroglucose reductase [EC:1.1.1.432] D NEF64_09235 mgrA; L-glyceraldehyde 3-phosphate reductase K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-] D NEF64_01065 GMC family oxidoreductase K26059 gtd1; glucoside 3-dehydrogenase (cytochrome c) catalytic subunit [EC:1.1.2.11] D NEF64_15195 PQQ-dependent sugar dehydrogenase K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-] D NEF64_12200 coniferyl aldehyde dehydrogenase K00154 E1.2.1.68; coniferyl-aldehyde dehydrogenase [EC:1.2.1.68] D NEF64_05520 (2Fe-2S)-binding protein K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16] D NEF64_19000 NAD(P)-binding domain-containing protein K06988 fno; 8-hydroxy-5-deazaflavin:NADPH oxidoreductase [EC:1.5.1.40] D NEF64_05680 electron transfer flavoprotein-ubiquinone oxidoreductase K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1] D NEF64_04625 NADPH:quinone oxidoreductase family protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D NEF64_05585 quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D NEF64_15495 NAD(P)H-quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D NEF64_13895 ahpF; alkyl hydroperoxide reductase subunit F K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-] D NEF64_02040 msrA; peptide-methionine (S)-S-oxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D NEF64_02500 msrA; peptide-methionine (S)-S-oxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D NEF64_08445 bifunctional methionine sulfoxide reductase B/A protein K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D NEF64_02290 msrB; peptide-methionine (R)-S-oxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] D NEF64_02675 msrB; peptide-methionine (R)-S-oxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] D NEF64_14740 yghU; glutathione-dependent disulfide-bond oxidoreductase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-] D NEF64_04505 glutathione S-transferase family protein K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7] D NEF64_09205 alpha/beta hydrolase K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10] D NEF64_13295 alpha/beta hydrolase K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10] D NEF64_14475 peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D NEF64_13900 ahpC; alkyl hydroperoxide reductase subunit C K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26] D NEF64_02295 organic hydroperoxide resistance protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28] D NEF64_18025 OsmC family protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28] D NEF64_04245 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D NEF64_05305 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D NEF64_16145 aspartyl/asparaginyl beta-hydroxylase domain-containing protein K22616 olsC; ornithine lipid ester-linked acyl 2-hydroxylase [EC:1.14.11.58] D NEF64_11755 Fe2+-dependent dioxygenase K07336 K07336; PKHD-type hydroxylase [EC:1.14.11.-] D NEF64_17435 Fe2+-dependent dioxygenase K07336 K07336; PKHD-type hydroxylase [EC:1.14.11.-] D NEF64_12175 LLM class flavin-dependent oxidoreductase K26058 smoC; sulfoquinovose monooxygenase [EC:1.14.14.181] D NEF64_15100 ferredoxin--NADP reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D NEF64_05600 arsenate reductase family protein K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1] D NEF64_09140 arsC; arsenate reductase (glutaredoxin) K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1] D NEF64_18355 arsC; arsenate reductase (glutaredoxin) K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1] D NEF64_07150 protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D NEF64_02195 cyclopropane-fatty-acyl-phospholipid synthase family protein K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D NEF64_10480 cyclopropane-fatty-acyl-phospholipid synthase family protein K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D NEF64_07005 GNAT family N-acetyltransferase K03829 yedL; putative acetyltransferase [EC:2.3.1.-] D NEF64_02120 glutaminyl-peptide cyclotransferase K22757 QCT; glutaminyl-peptide cyclotransferase [EC:2.3.2.5] D NEF64_14685 aat; leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6] D NEF64_05265 arginyltransferase K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29] D NEF64_06960 glycosidase K20885 K20885; beta-1,2-mannobiose phosphorylase / 1,2-beta-oligomannan phosphorylase [EC:2.4.1.339 2.4.1.340] D NEF64_09895 mdcB; triphosphoribosyl-dephospho-CoA synthase MdcB K13930 mdcB; triphosphoribosyl-dephospho-CoA synthase [EC:2.4.2.52] D NEF64_13635 deoxyhypusine synthase K00809 DHPS; deoxyhypusine synthase [EC:2.5.1.46] D NEF64_02880 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D NEF64_15145 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D NEF64_01345 kinase/pyrophosphorylase K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33] D NEF64_09890 mdcG; malonate decarboxylase holo-[acyl-carrier-protein] synthase K13934 mdcG; phosphoribosyl-dephospho-CoA transferase [EC:2.7.7.66] D NEF64_06945 YdiU family protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108] D NEF64_17540 9-O-acetylesterase K05970 SIAE; sialate O-acetylesterase [EC:3.1.1.53] D NEF64_06760 carboxylesterase family protein K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-] D NEF64_08135 carboxylesterase family protein K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-] D NEF64_08675 carboxylesterase/lipase family protein K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-] D NEF64_08715 carboxylesterase/lipase family protein K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-] D NEF64_09030 carboxylesterase family protein K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-] D NEF64_00130 acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D NEF64_02995 acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D NEF64_01655 histidine phosphatase family protein K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-] D NEF64_10300 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D NEF64_04550 endo-1,4-beta-xylanase K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8] D NEF64_18920 glycoside hydrolase family 11 protein K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8] D NEF64_17570 family 43 glycosylhydrolase K06113 abnA; arabinan endo-1,5-alpha-L-arabinosidase [EC:3.2.1.99] D NEF64_10920 alpha-glucuronidase K01235 aguA; alpha-glucuronidase [EC:3.2.1.139] D NEF64_08845 hypothetical protein K18578 CEL74A; xyloglucan-specific exo-beta-1,4-glucanase [EC:3.2.1.155] D NEF64_12370 hypothetical protein K18578 CEL74A; xyloglucan-specific exo-beta-1,4-glucanase [EC:3.2.1.155] D NEF64_12360 DUF5110 domain-containing protein K01811 xylS; alpha-D-xyloside xylohydrolase [EC:3.2.1.177] D NEF64_13510 N-acetylmuramoyl-L-alanine amidase K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D NEF64_12860 amidohydrolase family protein K06015 E3.5.1.81; N-acyl-D-amino-acid deacylase [EC:3.5.1.81] D NEF64_10055 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D NEF64_09745 penicillin acylase family protein K07116 pvdQ; acyl-homoserine-lactone acylase [EC:3.5.1.97] D NEF64_14430 carbon-nitrogen hydrolase family protein K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128] D NEF64_11805 alpha/beta hydrolase K07002 RBBP9; serine hydrolase [EC:3.-.-.-] D NEF64_09880 biotin-independent malonate decarboxylase subunit beta K13932 mdcD; malonate decarboxylase beta subunit [EC:4.1.1.87] D NEF64_09885 biotin-independent malonate decarboxylase subunit gamma K13933 mdcE; malonate decarboxylase gamma subunit [EC:4.1.1.87] D NEF64_04235 radical SAM protein K03716 splB; spore photoproduct lyase [EC:4.1.99.14] D NEF64_10030 NAD(P)H-hydrate dehydratase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D NEF64_09680 L-rhamnose mutarotase K03534 rhaM; L-rhamnose mutarotase [EC:5.1.3.32] D NEF64_06200 acyl--CoA ligase K25775 casG; steroid-24-oyl-CoA synthetase [EC:6.2.1.-] D NEF64_12475 cation-translocating P-type ATPase K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10] C 99981 Carbohydrate metabolism D NEF64_01055 gluconate 2-dehydrogenase subunit 3 family protein K26060 gtd2; glucoside 3-dehydrogenase (cytochrome c) hitch-hiker subunit C 99982 Energy metabolism D NEF64_13740 fdhD; formate dehydrogenase accessory sulfurtransferase FdhD K02379 fdhD; FdhD protein D NEF64_01710 ferredoxin family protein K05524 fdxA; ferredoxin D NEF64_01605 electron transfer flavoprotein subunit beta/FixA family protein K03521 fixA; electron transfer flavoprotein beta subunit C 99983 Lipid metabolism C 99984 Nucleotide metabolism C 99985 Amino acid metabolism D NEF64_01250 YggS family pyridoxal phosphate-dependent enzyme K06997 yggS; PLP dependent protein D NEF64_12615 GNAT family N-acetyltransferase K22479 argA; N-acetyltransferase C 99986 Glycan metabolism C 99987 Cofactor metabolism D NEF64_06450 cobW; cobalamin biosynthesis protein CobW K02234 cobW; cobalamin biosynthesis protein CobW D NEF64_07345 ubiB; 2-polyprenylphenol 6-hydroxylase K03688 ubiB; ubiquinone biosynthesis protein D NEF64_07775 alpha/beta fold hydrolase K06049 bchO; magnesium chelatase accessory protein D NEF64_02245 ubiquinone biosynthesis protein COQ4 K18586 COQ4; ubiquinone biosynthesis protein COQ4 D NEF64_10235 type II toxin-antitoxin system RatA family toxin K18588 COQ10; coenzyme Q-binding protein COQ10 C 99988 Secondary metabolism D NEF64_09485 polyhydroxybutyrate depolymerase K03932 lpqC; polyhydroxybutyrate depolymerase D NEF64_04240 NAD(P)H-dependent oxidoreductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone) C 99999 Others D NEF64_09970 DoxX family protein K15977 K15977; putative oxidoreductase B B 09192 Unclassified: genetic information processing C 99973 Transcription D NEF64_02115 cold-shock protein K03704 cspA; cold shock protein D NEF64_14705 cold shock domain-containing protein K03704 cspA; cold shock protein D NEF64_15575 cold-shock protein K03704 cspA; cold shock protein D NEF64_01820 P-II family nitrogen regulator K04752 glnK; nitrogen regulatory protein P-II 2 C 99974 Translation D NEF64_02075 ligase-associated DNA damage response exonuclease K07577 K07577; putative mRNA 3-end processing factor C 99975 Protein processing D NEF64_02840 clpS; ATP-dependent Clp protease adapter ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS D NEF64_13955 tig; trigger factor K03545 tig; trigger factor D NEF64_09990 smpB; SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein D NEF64_07440 YifB family Mg chelatase-like AAA ATPase K07391 comM; magnesium chelatase family protein D NEF64_15770 XdhC family protein K07402 xdhC; xanthine dehydrogenase accessory factor C 99976 Replication and repair D NEF64_03755 HNH endonuclease K07454 K07454; putative restriction endonuclease D NEF64_14905 radC; DNA repair protein RadC K03630 radC; DNA repair protein RadC D NEF64_14995 YraN family protein K07460 yraN; putative endonuclease D NEF64_01960 GIY-YIG nuclease family protein K07461 K07461; putative endonuclease D NEF64_04270 GIY-YIG nuclease family protein K07461 K07461; putative endonuclease D NEF64_15650 GIY-YIG nuclease family protein K07461 K07461; putative endonuclease D NEF64_02370 dprA; DNA-processing protein DprA K04096 smf; DNA processing protein D NEF64_05980 replication-associated recombination protein A K07478 ycaJ; putative ATPase D NEF64_12420 transposase K07497 K07497; putative transposase C 99979 Viral proteins C 99998 Others D NEF64_13440 pspA; phage shock protein PspA K03969 pspA; phage shock protein A D NEF64_13575 YbaB/EbfC family nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D NEF64_16075 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D NEF64_18130 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D NEF64_09775 CitMHS family transporter K03300 TC.CITMHS; citrate-Mg2+:H+ or citrate-Ca2+:H+ symporter, CitMHS family D NEF64_02530 peptide MFS transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family D NEF64_13250 inorganic phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family D NEF64_16335 inorganic phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family D NEF64_02735 NupC/NupG family nucleoside CNT transporter K03317 TC.CNT; concentrative nucleoside transporter, CNT family C 99978 Cell growth D NEF64_13425 septation protein A K06190 ispZ; intracellular septation protein D NEF64_17690 peptidoglycan DD-metalloendopeptidase family protein K22719 envC; murein hydrolase activator C 99993 Cell motility C 99995 Signaling proteins D NEF64_17810 carbon starvation protein A K06200 cstA; carbon starvation protein D NEF64_04115 typA; translational GTPase TypA K06207 typA; GTP-binding protein D NEF64_03435 HPP family protein K07168 K07168; CBS domain-containing membrane protein D NEF64_16185 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins D NEF64_16375 AAA family ATPase K08482 kaiC; circadian clock protein KaiC C 99992 Structural proteins D NEF64_02700 VacJ family lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA D NEF64_12270 outer membrane beta-barrel protein K07275 ompW; outer membrane protein D NEF64_10105 NfeD family protein K07340 ybbJ; inner membrane protein D NEF64_15790 efflux RND transporter periplasmic adaptor subunit K02005 ABC.CD.TX; HlyD family secretion protein D NEF64_13795 ccmE; cytochrome c maturation protein CcmE K02197 ccmE; cytochrome c-type biogenesis protein CcmE D NEF64_13780 cytochrome c-type biogenesis protein CcmH K02200 ccmH; cytochrome c-type biogenesis protein CcmH C 99994 Others D NEF64_04815 phoU; phosphate signaling complex protein PhoU K02039 phoU; phosphate transport system protein D NEF64_00285 glucan biosynthesis protein K03670 mdoG; periplasmic glucans biosynthesis protein D NEF64_11645 copper homeostasis protein CutC K06201 cutC; copper homeostasis protein D NEF64_14820 apaG; Co2+/Mg2+ efflux protein ApaG K06195 apaG; ApaG protein D NEF64_01850 SdpI family protein K26996 sdpI; immunity protein, SdpI family B B 09194 Poorly characterized C 99996 General function prediction only D NEF64_07600 Gfo/Idh/MocA family oxidoreductase K03810 mviM; virulence factor D NEF64_00345 tRNA-binding protein K06878 K06878; tRNA-binding protein D NEF64_17615 HAD family phosphatase K07025 K07025; putative hydrolase of the HAD superfamily D NEF64_17925 pyrimidine 5'-nucleotidase K07025 K07025; putative hydrolase of the HAD superfamily D NEF64_14465 erpA; iron-sulfur cluster insertion protein ErpA K15724 erpA; iron-sulfur cluster insertion protein D NEF64_16110 sufB; Fe-S cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB D NEF64_03865 YihY/virulence factor BrkB family protein K07058 K07058; membrane protein D NEF64_13475 SufE family protein K02426 sufE; cysteine desulfuration protein SufE D NEF64_11220 rhodanese-related sulfurtransferase K07146 K07146; UPF0176 protein D NEF64_09130 arsH; arsenical resistance protein ArsH K11811 arsH; arsenical resistance protein ArsH D NEF64_18340 arsH; arsenical resistance protein ArsH K11811 arsH; arsenical resistance protein ArsH D NEF64_15270 LemA family protein K03744 lemA; LemA protein D NEF64_18450 DUF202 domain-containing protein K00389 yidH; putative membrane protein D NEF64_01210 DUF2238 domain-containing protein K08984 yjdF; putative membrane protein D NEF64_11250 DUF350 domain-containing protein K08989 K08989; putative membrane protein D NEF64_16980 DUF4142 domain-containing protein K08995 K08995; putative membrane protein D NEF64_01915 alkylphosphonate utilization protein K06193 phnA; protein PhnA C 99997 Function unknown D NEF64_04595 ankyrin repeat domain-containing protein K06867 K06867; uncharacterized protein D NEF64_11225 ankyrin repeat domain-containing protein K06867 K06867; uncharacterized protein D NEF64_15275 TPM domain-containing protein K06872 K06872; uncharacterized protein D NEF64_11115 Bax inhibitor-1/YccA family protein K06890 K06890; uncharacterized protein D NEF64_08565 nuclear transport factor 2 family protein K06893 K06893; uncharacterized protein D NEF64_17960 ATP-binding protein K06923 K06923; uncharacterized protein D NEF64_16490 CoA-binding protein K06929 K06929; uncharacterized protein D NEF64_02045 pdeM; ligase-associated DNA damage response endonuclease PdeM K06953 K06953; uncharacterized protein D NEF64_04250 CocE/NonD family hydrolase K06978 K06978; uncharacterized protein D NEF64_16210 VOC family protein K06991 K06991; uncharacterized protein D NEF64_08400 pyridoxamine 5'-phosphate oxidase family protein K07006 K07006; uncharacterized protein D NEF64_13615 alpha/beta hydrolase K07018 K07018; uncharacterized protein D NEF64_07095 metal-dependent hydrolase K07044 K07044; uncharacterized protein D NEF64_10340 neutral zinc metallopeptidase K07054 K07054; uncharacterized protein D NEF64_01675 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein D NEF64_02215 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein D NEF64_05910 PhoX family phosphatase K07093 K07093; uncharacterized protein D NEF64_11060 metallophosphoesterase K07098 K07098; uncharacterized protein D NEF64_15970 AbrB family transcriptional regulator K07120 K07120; uncharacterized protein D NEF64_02355 sel1 repeat family protein K07126 K07126; uncharacterized protein D NEF64_17430 sel1 repeat family protein K07126 K07126; uncharacterized protein D NEF64_11570 NAD(P)/FAD-dependent oxidoreductase K07137 K07137; uncharacterized protein D NEF64_01200 LON peptidase substrate-binding domain-containing protein K07157 K07157; uncharacterized protein D NEF64_07420 yidD; membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein D NEF64_14700 DUF192 domain-containing protein K09005 K09005; uncharacterized protein D NEF64_13355 GatB/YqeY domain-containing protein K09117 K09117; uncharacterized protein D NEF64_02755 DUF167 family protein K09131 K09131; uncharacterized protein D NEF64_01410 YcgN family cysteine cluster protein K09160 K09160; uncharacterized protein D NEF64_06075 YqcI/YcgG family protein K09190 K09190; uncharacterized protein D NEF64_09000 DUF1349 domain-containing protein K09702 K09702; uncharacterized protein D NEF64_07745 glycoside hydrolase family 125 protein K09704 K09704; uncharacterized protein D NEF64_11695 glycoside hydrolase family 125 protein K09704 K09704; uncharacterized protein D NEF64_12845 glycoside hydrolase family 125 protein K09704 K09704; uncharacterized protein D NEF64_15990 YaiI/YqxD family protein K09768 K09768; uncharacterized protein D NEF64_17840 DUF808 domain-containing protein K09781 K09781; uncharacterized protein D NEF64_01205 Trm112 family protein K09791 K09791; uncharacterized protein D NEF64_15680 BrnT family toxin K09803 K09803; uncharacterized protein D NEF64_18705 BrnT family toxin K09803 K09803; uncharacterized protein D NEF64_03940 SIMPL domain-containing protein K09807 K09807; uncharacterized protein D NEF64_11905 yaaA; peroxide stress protein YaaA K09861 K09861; uncharacterized protein D NEF64_17525 yacG; DNA gyrase inhibitor YacG K09862 K09862; uncharacterized protein D NEF64_02175 GNAT family N-acetyltransferase K09919 K09919; uncharacterized protein D NEF64_09350 winged helix DNA-binding domain-containing protein K09927 K09927; uncharacterized protein D NEF64_17800 DUF1244 domain-containing protein K09948 K09948; uncharacterized protein D NEF64_04605 glycoside hydrolase family 127 protein K09955 K09955; uncharacterized protein D NEF64_05990 DUF2218 domain-containing protein K09956 K09956; uncharacterized protein D NEF64_08390 nuclear transport factor 2 family protein K09958 K09958; uncharacterized protein D NEF64_06070 urea carboxylase-associated family protein K09967 K09967; uncharacterized protein D NEF64_05060 TraB/GumN family protein K09973 K09973; uncharacterized protein D NEF64_11240 YjfI family protein K09980 K09980; uncharacterized protein D NEF64_03270 DUF1993 domain-containing protein K09983 K09983; uncharacterized protein D NEF64_02550 DUF1272 domain-containing protein K09984 K09984; uncharacterized protein D NEF64_18090 ClpXP protease specificity-enhancing factor SspB K09985 K09985; uncharacterized protein D NEF64_06830 DUF1285 domain-containing protein K09986 K09986; uncharacterized protein D NEF64_15480 DUF1013 domain-containing protein K09987 K09987; uncharacterized protein D NEF64_12065 VWA domain-containing protein K09989 K09989; uncharacterized protein D NEF64_16330 DUF47 family protein K07220 K07220; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 20, 2024