+E Transcription factors KO #

  Transcription Factors - Streptococcus agalactiae ILRI005

% ! AEukaryotic type B Basic leucine zipper (bZIP) C AP-1(-like) components, Jun C AP-1(-like) components, Fos C AP-1(-like) components, Maf C AP-1(-like) components, NF-E2 C AP-1(-like) components, Fungal regulators C AP-1(-like) components, CRE-BP/ATF C CREB C C/EBP-like factors C bZIP/PAR C Plant bZIP factors C ZIP only B Basic helix-loop-helix (bHLH) C Ubiquitous (class A) factors C Myogenic transcription factors C Achaete-Scute C Tal/Twist/Atonal/Hen, Lymphoid factors C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors C Tal/Twist/Atonal/Hen, HEN C Tal/Twist/Atonal/Hen, Mesp C Tal/Twist/Atonal/Hen, Atonal C Tal/Twist/Atonal/Hen, Pancreatic factors C Hairy, Hairy/E(SPL) C Hairy, Fungal regulators C Factors with PAS domain C Yabby C INO C HLH domain only B Basic helix-loop-helix/leucine zipper (bHLH-ZIP) C Ubiquitous bHLH-ZIP factors C Cell cycle controlling factors, Myc C Cell cycle controlling factors, Mad/Max C Other bHLH-ZIP factors B Other basic domains C NF-1 C RF-X C AP-2 (bHSH) B Zinc finger C Cys4 thyroid hormone receptor-like C Cys4 hepatocyte nuclear factor 4-like C Cys4 estrogen receptor-like C Cys4 nerve growth factor IB-like C Cys4 Fushi tarazu-F1-like C Cys4 germ cell nuclear factor C Cys4 Knirps/DAX1-like C Cys4 GATA-factors C Cys2His2 SP/KLF family and related proteins C Cys2His2 GLI-like C Cys2His2 Snail C Cys2His2 BTB-ZF factors C Cys2His2 BED C Cys2His2 PRDM C Cys2His2 metabolic regulators in fungi C Cys2His2 others C Cys2HisCys zinc factors C Cys3His zinc factors C Cys2CysHis zinc factors C CXXC CpG-binding proteins D MSA_7030 C-5 cytosine-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] C Cys6 metabolic regulators in fungi C Other zinc fingers B Helix-turn-helix C Homeo domain ANTP: HOXL C Homeo domain ANTP: NKL C Homeo domain Paired-related C Homeo domain LIM C Homeo domain POU C Homeo domain SINE C Homeo domain ZF C Homeo domain CUT C Homeo domain PROS C Homeo domain TALE C Homeo domain other C Fork head/winged helix developmental regulators C Fork head/winged helix tissue-specific regulators C Fork head/winged helix cell cycle-controlling factors, E2F C Fork head/winged helix cell cycle-controlling factors, DP C Fork head/winged helix other regulators C Heat shock factors C Tryptophan clusters Myb, Myb-factors C Tryptophan clusters Myb, Myb-like factors C Tryptophan clusters Ets-type C Tryptophan clusters interferon-regulating factors C TEA domain C ARID B beta-Scaffold factors with minor groove contacts C RHR (Rel homology region) Rel/Ankyrin C RHR (Rel homology region) Ankyrin only C RHR (Rel homology region) NF-AT C STAT C p53 C MADS-box regulators of differentiation, MEF-2 C MADS-box regulators of differentiation, Homeotic genes C MADS-box regulators of differentiation, Yeast regulators C MADS-box responders to external signals C SAND domain-containing proteins C TATA-binding proteins C HMG SOX C HMG TCF-1 C HMG2-related C UBF C Other HMG box factors C Heteromeric CCAAT factors C Grainyhead C Cold-shock domain factors, DbpA-like C Cold-shock domain factors, YB-1/DbpB-like C Cold-shock domain factors, FRG Y2-like C Runt C MYRF B Other transcription factors C HMGI(Y) C NUPR E Line #4 C Pocket domain Rb C Pocket domain CBP C T-box C DMRT C LRRFIP C TCP C AP2/ERF C WRKY C LOB C Copper-fist proteins fungal regulators C Others # AProkaryotic type B Helix-turn-helix C AraC family D MSA_20770 Transcriptional regulator, AraC family K13653 K13653; AraC family transcriptional regulator C LysR family C DeoR family D MSA_13750 Lactose phosphotransferase system repressor K02530 lacR; DeoR family transcriptional regulator, lactose phosphotransferase system repressor D MSA_20220 Lactose phosphotransferase system repressor K02530 lacR; DeoR family transcriptional regulator, lactose phosphotransferase system repressor D MSA_14690 Transcriptional repressor of the fructose operon, DeoR family K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor D MSA_17970 CBS domain protein, lmo1865 homolog K23774 ccpN; DeoR family transcriptional regulator, catabolite repression regulator C LacI family D MSA_15640 Maltose operon transcriptional repressor MalR,LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor D MSA_1830 Ribose operon repressor K02529 galR; LacI family transcriptional regulator, galactose operon repressor D MSA_8490 Catabolite control protein A K02529 galR; LacI family transcriptional regulator, galactose operon repressor D MSA_19450 Sugar-binding transcriptional regulator, LacI family K02525 kdgR; LacI family transcriptional regulator, kdg operon repressor D MSA_19820 Transcriptional regulator RegR, rpressor of hyaluronate and KDG utilization K02525 kdgR; LacI family transcriptional regulator, kdg operon repressor D MSA_18170 Sucrose operon repressor ScrR, LacI family K03484 scrR; LacI family transcriptional regulator, sucrose operon repressor C GntR family D MSA_10890 Transcriptional regulator in cluster with beta-lactamase, GntR family K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator D MSA_8410 Transcriptional regulator, GntR family K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex C TetR/AcrR family C Lrp/AsnC family C LuxR family C MarR family D MSA_9410 Transcriptional regulator, MarR family K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator D MSA_14530 Transcriptional regulator, MarR family K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator C MerR family D MSA_18950 Transcriptional regulator, repressor of the glutamine synthetase, MerR family K03713 glnR; MerR family transcriptional regulator, glutamine synthetase repressor C Fur family D MSA_4630 Peroxide stress regulator PerR, FUR family K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator C IclR family C CRP/FNR family D MSA_22390 Transcriptional regulator ArcR essential for anaerobic expression of the ADI pathway, Crp/Fnr family K21828 arcR; CRP/FNR family transcriptional regulator, arginine deiminase pathway regulator D MSA_19800 Predicted N-ribosylNicotinamide CRP-like regulator K16326 yeiL; CRP/FNR family transcriptional regulator, putaive post-exponential-phase nitrogen-starvation regulator C Rrf2 family C ArsR family C XRE family C PadR family D MSA_3300 Transcriptional regulator, PadR family K10947 K10947; PadR family transcriptional regulator C Other families D MSA_16530 Mn-dependent transcriptional regulator MntR K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator D MSA_9740 Biotin operon repressor / Biotin-protein ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D MSA_880 Transcriptional regulator K20342 comR; HTH-type transcriptional regulator, regulator for ComX D MSA_16130 Positive transcriptional regulator, MutR family K20373 rgg2; HTH-type transcriptional regulator, SHP2-responsive activator D MSA_2940 Positive transcriptional regulator, MutR family K20373 rgg2; HTH-type transcriptional regulator, SHP2-responsive activator D MSA_19030 PurR: transcription regulator associated with purine metabolism K09685 purR; HTH-type transcriptional regulator, purine operon repressor D MSA_9370 Sugar diacid utilization regulator SdaR K02647 cdaR; carbohydrate diacid regulator D MSA_12180 Redox-sensitive transcriptional regulator (AT-rich DNA-binding protein) K01926 rex; redox-sensing transcriptional repressor D MSA_18000 GTP-sensing transcriptional pleiotropic repressor codY K03706 codY; transcriptional pleiotropic repressor D MSA_6430 hypothetical protein K07729 K07729; putative transcriptional regulator D MSA_2400 Transcriptional regulator, Cro/CI family K07729 K07729; putative transcriptional regulator D MSA_2800 hypothetical protein K07729 K07729; putative transcriptional regulator D MSA_9590 Transcriptional regulator, Cro/CI family K07729 K07729; putative transcriptional regulator D MSA_7170 putative cro protein K07729 K07729; putative transcriptional regulator B Ribbon-helix-helix C CopG family C Other families B Other transcription factors C BglG family D MSA_9340 Beta-glucoside bgl operon antiterminator, BglG family K03488 licT; beta-glucoside operon transcriptional antiterminator D MSA_19380 Transcriptional antiterminator with PTS regulation domain, SPy0181 ortholog K03493 bglG1; transcriptional antiterminator D MSA_5190 Predicted galactitol operon regulator (Transcriptional antiterminator), BglG family / PTS system, mannitol/fructose-specific IIA component K03483 mtlR; mannitol operon transcriptional activator C Others D MSA_22560 Chromosome (plasmid) partitioning protein ParB / Stage 0 sporulation protein J K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D MSA_21570 Arginine repressor ArgR, putative K03402 argR; transcriptional regulator of arginine metabolism D MSA_6030 Arginine pathway regulatory protein ArgR,repressor of arg regulon K03402 argR; transcriptional regulator of arginine metabolism D MSA_22380 Arginine pathway regulatory protein ArgR,repressor of arg regulon K03402 argR; transcriptional regulator of arginine metabolism D MSA_1580 Heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor D MSA_19670 Transcriptional regulator CtsR K03708 ctsR; transcriptional regulator of stress and heat shock response D MSA_8760 Phage shock protein C; stress-responsive transcriptional regulator K03973 pspC; phage shock protein C D MSA_14870 Uracil phosphoribosyltransferase / Pyrimidine operon regulatory protein PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D MSA_17490 Ribonucleotide reductase transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR D MSA_1540 Competence-specific sigma factor ComX K12296 comX1_2; competence protein ComX D MSA_7070 Competence-specific sigma factor ComX K12296 comX1_2; competence protein ComX ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: June 7, 2024 #
Classification taken and modified from TRANSFAC 7.0