+E Ribosome biogenesis KO
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Ribosome Biogenesis - Streptococcus agalactiae COH1
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AEukaryotic type
B Sno RNPs
C Box C/D snoRNPs
C Box H/ACA snoRNPs
B 90S particles
C U3 small nucleolar RNA-associated proteins
C Helicases
C GTPase
C RNase
D GBSCOH1_0650 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
C Kinase
C Other 90S particles
B Pre-40S particles
C Kinases
C Export and cytoplasmic maturation factors
C Other pre-40S particles
B Pre-60S particles
C Helicases
C GTPases
C RNases
D RNase MRP
C Kinases
C Export and cytoplasmic maturation factors
C 5-FMC complex
C Ribosome quality control proteins
C Other pre-60S particles
B Other ribosome biogenesis factors
C GBSCOH1_1357 GTP-binding protein Era K03595 era; GTPase
C GBSCOH1_1331 GTP-binding protein, GTP1/Obg family K03979 obgE; GTPase [EC:3.6.5.-]
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AProkaryotic type
B Sno RNPs
C Box C/D snoRNPs
C Box H/ACA snoRNPs
B rRNA transcription factors
C GBSCOH1_0357 transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
C GBSCOH1_1544 transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
C GBSCOH1_1864 transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG
B rRNA modification factors
C 16S rRNA modification factors
D GBSCOH1_1337 ribosomal small subunit pseudouridine synthase A K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D GBSCOH1_0728 ribosomal small subunit pseudouridine synthase A K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D GBSCOH1_1625 dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D GBSCOH1_0298 sun protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D GBSCOH1_0851 Methyltransferase small domain family K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D GBSCOH1_0436 type II DNA modification methyltransferase,putative K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D GBSCOH1_1766 conserved hypothetical protein TIGR00046 K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D GBSCOH1_1477 methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D GBSCOH1_0268 S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D GBSCOH1_1424 conserved hypothetical protein TIGR00096 K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D GBSCOH1_0482 hemolysin A K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
C 23S rRNA modification factors
D GBSCOH1_1624 rRNA (guanine-N1-)-methyltransferase, putative K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187]
D GBSCOH1_0208 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D GBSCOH1_2001 conserved hypothetical protein TIGR00246 K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D GBSCOH1_1251 conserved hypothetical protein K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D GBSCOH1_0442 radical SAM enyme, Cfr family K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D GBSCOH1_0482 hemolysin A K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D GBSCOH1_0554 RNA methyltransferase, TrmA family K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D GBSCOH1_1443 ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D GBSCOH1_1868 ribosomal large subunit pseudouridine synthase,RluD subfamily K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D GBSCOH1_1226 ribosomal large subunit pseudouridine synthase,RluD subfamily K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D GBSCOH1_0999 ribosomal large subunit pseudouridine synthase,RluD subfamily K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
B ribosomal protein modification factors
C GBSCOH1_1604 ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
C GBSCOH1_0236 acetyltransferase, GNAT family K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267]
C GBSCOH1_1216 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
C GBSCOH1_1767 ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
B rRNA processing factors
C GBSCOH1_0650 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
C GBSCOH1_1891 conserved hypothetical protein TIGR00250 K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
C GBSCOH1_0207 conserved hypothetical protein K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-]
B rRNA helicases
C GBSCOH1_0704 ATP-dependent RNA helicase, DEAD/DEAH box family K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
C GBSCOH1_0272 ATP-dependent RNA helicase, DEAD/DEAH box family K18692 cshB; ATP-dependent RNA helicase CshB [EC:5.6.2.7]
B GTPases
C GBSCOH1_1357 GTP-binding protein Era K03595 era; GTPase
C GBSCOH1_1623 GTPase YjeQ K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
C GBSCOH1_1468 GTP-binding protein, Era/ThdF family K03977 engA; GTPase
C GBSCOH1_1331 GTP-binding protein, GTP1/Obg family K03979 obgE; GTPase [EC:3.6.5.-]
C GBSCOH1_0932 GTP-binding protein K14540 rbgA; ribosome biogenesis GTPase A
C GBSCOH1_1117 GTP-binding protein HflX K03665 hflX; GTPase
C GBSCOH1_1515 GTP-binding protein K06948 yqeH; 30S ribosome assembly GTPase
B Other maturation factors
C GBSCOH1_0981 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
C GBSCOH1_1735 GTP pyrophosphokinase family protein K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
C GBSCOH1_0361 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
C GBSCOH1_0356 conserved hypothetical protein K09748 rimP; ribosome maturation factor RimP
C GBSCOH1_1982 conserved hypothetical protein K14761 rlbA; ribosome-associated protein
C GBSCOH1_1510 iojap-related protein K09710 ybeB; ribosome-associated protein
C GBSCOH1_1359 conserved hypothetical protein TIGR00043 K07042 ybeY; probable rRNA maturation factor
C GBSCOH1_1514 conserved hypothetical protein TIGR00253 K07574 yhbY; RNA-binding protein
C GBSCOH1_0319 ribosomal subunit interface protein K05808 hpf; ribosome hibernation promoting factor
C GBSCOH1_0006 GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase
C GBSCOH1_1474 Uncharacteried ACR, COG1399 K07040 yceD; DUF177 domain-containing protein
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ARelated small nucleolar RNAs
B Box C/D snoRNAs
C SnoRNAs involved in processing reactions
C SnoRNAs act as guides for 2'-O-ribose methylation
B Box H/ACA snoRNAs
C SnoRNAs involved in processing reactions
C SnoRNAs act as guides for pseudouridynation
B Other snoRNA
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 22, 2024